Query 004149
Match_columns 771
No_of_seqs 591 out of 4424
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 15:50:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004149.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004149hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a5s_A Dipeptidyl peptidase 4 100.0 7.1E-56 2.4E-60 519.9 52.5 610 47-771 67-726 (740)
2 3azo_A Aminopeptidase; POP fam 100.0 2.1E-52 7E-57 485.8 54.4 587 53-771 33-649 (662)
3 3o4h_A Acylamino-acid-releasin 100.0 5.6E-53 1.9E-57 482.5 46.7 560 24-771 9-580 (582)
4 1xfd_A DIP, dipeptidyl aminope 100.0 3.7E-53 1.3E-57 497.4 42.4 616 46-771 65-722 (723)
5 2xdw_A Prolyl endopeptidase; a 100.0 8.4E-51 2.9E-55 474.8 60.7 592 50-771 80-705 (710)
6 2bkl_A Prolyl endopeptidase; m 100.0 1.5E-50 5.1E-55 471.3 52.0 586 48-771 74-676 (695)
7 2ecf_A Dipeptidyl peptidase IV 100.0 1.3E-50 4.3E-55 477.1 51.0 598 46-771 113-740 (741)
8 1z68_A Fibroblast activation p 100.0 1.5E-50 5E-55 474.7 48.2 607 45-771 63-719 (719)
9 1yr2_A Prolyl oligopeptidase; 100.0 1.6E-49 5.6E-54 465.6 55.8 587 47-771 112-718 (741)
10 3iuj_A Prolyl endopeptidase; h 100.0 2.6E-49 8.8E-54 459.5 54.0 540 100-771 130-685 (693)
11 2z3z_A Dipeptidyl aminopeptida 100.0 2.6E-49 8.9E-54 463.2 53.4 591 47-770 87-706 (706)
12 2xe4_A Oligopeptidase B; hydro 100.0 2.9E-47 9.9E-52 444.4 57.2 597 28-771 104-742 (751)
13 4hvt_A Ritya.17583.B, post-pro 100.0 4E-38 1.4E-42 357.8 44.9 468 218-771 216-707 (711)
14 3pe7_A Oligogalacturonate lyas 99.9 1.3E-24 4.4E-29 234.3 18.9 318 81-468 18-385 (388)
15 4ao6_A Esterase; hydrolase, th 99.9 6.3E-24 2.1E-28 214.7 22.2 209 514-771 36-259 (259)
16 2hqs_A Protein TOLB; TOLB, PAL 99.9 1E-22 3.6E-27 221.0 32.1 266 52-443 142-408 (415)
17 3hxk_A Sugar hydrolase; alpha- 99.9 7.7E-24 2.6E-28 216.7 21.2 230 514-770 20-266 (276)
18 3f67_A Putative dienelactone h 99.9 1.3E-23 4.4E-28 210.2 17.8 214 517-769 14-241 (241)
19 2wtm_A EST1E; hydrolase; 1.60A 99.9 2.2E-23 7.5E-28 210.1 19.3 242 516-771 8-250 (251)
20 3bxp_A Putative lipase/esteras 99.9 1.2E-22 4.2E-27 207.9 23.5 224 516-769 11-270 (277)
21 3k2i_A Acyl-coenzyme A thioest 99.9 1.1E-22 3.8E-27 221.2 23.0 234 520-771 144-412 (422)
22 2jbw_A Dhpon-hydrolase, 2,6-di 99.9 1.6E-22 5.3E-27 217.7 22.2 229 517-771 135-365 (386)
23 3doh_A Esterase; alpha-beta hy 99.9 1.9E-22 6.6E-27 216.2 21.8 216 512-771 148-380 (380)
24 3ebl_A Gibberellin receptor GI 99.9 1.3E-22 4.4E-27 215.5 19.4 237 513-771 69-352 (365)
25 3hlk_A Acyl-coenzyme A thioest 99.9 1.7E-22 5.8E-27 220.8 20.5 234 520-771 160-428 (446)
26 1vlq_A Acetyl xylan esterase; 99.9 1.6E-22 5.6E-27 213.4 19.5 242 512-771 72-335 (337)
27 3bjr_A Putative carboxylestera 99.9 6.4E-23 2.2E-27 210.7 15.9 225 515-769 26-282 (283)
28 3pfb_A Cinnamoyl esterase; alp 99.9 1.9E-22 6.5E-27 205.3 17.7 240 515-769 28-267 (270)
29 2o2g_A Dienelactone hydrolase; 99.9 5E-22 1.7E-26 195.8 20.1 201 517-771 20-223 (223)
30 2i3d_A AGR_C_3351P, hypothetic 99.9 2.7E-21 9.1E-26 194.5 25.3 202 514-771 29-234 (249)
31 4fbl_A LIPS lipolytic enzyme; 99.9 2.2E-22 7.6E-27 206.2 17.3 223 535-769 49-281 (281)
32 1zi8_A Carboxymethylenebutenol 99.9 4.1E-22 1.4E-26 198.5 18.5 209 512-771 7-233 (236)
33 3ga7_A Acetyl esterase; phosph 99.9 7E-22 2.4E-26 207.3 21.0 228 512-771 67-323 (326)
34 4a5s_A Dipeptidyl peptidase 4 99.9 4.1E-21 1.4E-25 224.9 29.1 310 45-467 20-400 (740)
35 3fak_A Esterase/lipase, ESTE5; 99.9 7.8E-22 2.7E-26 206.2 20.3 224 520-770 66-308 (322)
36 2gop_A Trilobed protease; beta 99.9 1.7E-21 5.7E-26 206.4 23.2 318 32-464 9-330 (347)
37 3fcy_A Xylan esterase 1; alpha 99.9 1.8E-22 6.3E-27 213.8 15.1 241 512-769 86-344 (346)
38 3ksr_A Putative serine hydrola 99.9 8.3E-23 2.8E-27 210.6 11.4 228 517-770 14-241 (290)
39 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.6E-20 5.6E-25 203.7 28.4 243 108-466 141-386 (415)
40 1l7a_A Cephalosporin C deacety 99.9 1.9E-21 6.5E-26 203.1 19.8 240 513-771 61-317 (318)
41 2zsh_A Probable gibberellin re 99.9 5.3E-21 1.8E-25 202.8 22.9 228 518-769 80-351 (351)
42 2ecf_A Dipeptidyl peptidase IV 99.9 2E-20 6.9E-25 219.6 29.6 322 32-465 26-413 (741)
43 2hdw_A Hypothetical protein PA 99.9 3E-21 1E-25 206.3 20.5 247 512-770 72-367 (367)
44 3trd_A Alpha/beta hydrolase; c 99.9 9.3E-21 3.2E-25 184.7 21.8 194 513-766 11-207 (208)
45 3c5m_A Oligogalacturonate lyas 99.9 3.6E-21 1.2E-25 207.7 20.1 311 46-468 40-385 (396)
46 3hju_A Monoglyceride lipase; a 99.9 9.6E-21 3.3E-25 200.1 21.5 245 512-770 39-312 (342)
47 3i6y_A Esterase APC40077; lipa 99.9 3.1E-21 1.1E-25 197.7 17.0 233 516-771 26-279 (280)
48 3fcx_A FGH, esterase D, S-form 99.9 1.5E-21 5.2E-26 200.2 14.5 233 516-771 25-281 (282)
49 2hm7_A Carboxylesterase; alpha 99.9 1.6E-21 5.6E-26 203.0 14.8 228 515-771 55-310 (310)
50 3pe6_A Monoglyceride lipase; a 99.9 2.2E-20 7.5E-25 192.9 22.8 245 512-770 21-294 (303)
51 1mpx_A Alpha-amino acid ester 99.9 2.7E-21 9.1E-26 219.1 16.4 254 512-771 29-355 (615)
52 1lzl_A Heroin esterase; alpha/ 99.9 7.3E-21 2.5E-25 199.3 18.6 237 513-771 56-317 (323)
53 3pe7_A Oligogalacturonate lyas 99.9 1E-20 3.4E-25 203.8 20.0 280 47-424 41-386 (388)
54 2wir_A Pesta, alpha/beta hydro 99.9 2.4E-21 8.1E-26 202.1 14.3 234 514-771 57-312 (313)
55 2fuk_A XC6422 protein; A/B hyd 99.9 2.1E-20 7.1E-25 184.0 20.3 199 514-771 16-217 (220)
56 3vis_A Esterase; alpha/beta-hy 99.9 8.5E-21 2.9E-25 197.0 18.4 185 523-771 85-276 (306)
57 3ain_A 303AA long hypothetical 99.9 1.3E-20 4.3E-25 196.9 19.6 227 520-770 76-320 (323)
58 3h04_A Uncharacterized protein 99.9 3.5E-20 1.2E-24 188.5 22.5 233 513-771 8-274 (275)
59 1vkh_A Putative serine hydrola 99.9 2.4E-21 8.2E-26 197.8 13.7 210 533-766 37-272 (273)
60 3qh4_A Esterase LIPW; structur 99.9 3.7E-21 1.3E-25 200.6 15.0 228 512-771 64-316 (317)
61 4e15_A Kynurenine formamidase; 99.8 1.1E-21 3.8E-26 203.6 10.3 199 521-748 68-280 (303)
62 1jfr_A Lipase; serine hydrolas 99.8 1.9E-20 6.5E-25 189.8 19.2 188 522-771 40-232 (262)
63 1xfd_A DIP, dipeptidyl aminope 99.8 4.7E-20 1.6E-24 215.9 25.0 314 44-466 19-394 (723)
64 3ls2_A S-formylglutathione hyd 99.8 1E-20 3.4E-25 193.9 16.8 233 516-771 24-279 (280)
65 2o7r_A CXE carboxylesterase; a 99.8 4.6E-21 1.6E-25 202.3 14.7 234 519-770 64-331 (338)
66 3k6k_A Esterase/lipase; alpha/ 99.8 2.7E-20 9.2E-25 194.7 20.1 222 517-771 66-309 (322)
67 3fnb_A Acylaminoacyl peptidase 99.8 1.5E-20 5.2E-25 203.3 18.6 238 517-771 143-402 (405)
68 2c7b_A Carboxylesterase, ESTE1 99.8 1.1E-20 3.7E-25 196.9 16.7 232 515-771 55-309 (311)
69 2b9v_A Alpha-amino acid ester 99.8 1.9E-20 6.5E-25 212.7 20.1 254 512-771 41-367 (652)
70 3llc_A Putative hydrolase; str 99.8 4.5E-20 1.5E-24 187.4 20.9 239 514-768 18-268 (270)
71 3e4d_A Esterase D; S-formylglu 99.8 1E-20 3.4E-25 193.7 15.5 233 516-771 24-278 (278)
72 4h0c_A Phospholipase/carboxyle 99.8 3.5E-21 1.2E-25 187.0 10.4 188 534-767 19-209 (210)
73 1jkm_A Brefeldin A esterase; s 99.8 1.6E-20 5.4E-25 199.7 16.4 243 513-770 87-358 (361)
74 3og9_A Protein YAHD A copper i 99.8 6.8E-20 2.3E-24 178.7 19.0 191 525-769 8-208 (209)
75 1lns_A X-prolyl dipeptidyl ami 99.8 6.6E-20 2.2E-24 211.3 22.0 246 514-771 179-522 (763)
76 1z68_A Fibroblast activation p 99.8 6.7E-20 2.3E-24 214.4 21.9 312 46-466 20-392 (719)
77 1ufo_A Hypothetical protein TT 99.8 4.4E-20 1.5E-24 183.6 17.4 211 521-771 13-236 (238)
78 1fj2_A Protein (acyl protein t 99.8 4.8E-20 1.6E-24 182.9 17.3 198 525-771 14-229 (232)
79 3dkr_A Esterase D; alpha beta 99.8 3.3E-20 1.1E-24 186.1 15.5 220 535-770 20-249 (251)
80 2pbl_A Putative esterase/lipas 99.8 2E-20 6.9E-25 189.6 13.9 192 518-751 48-246 (262)
81 2ojh_A Uncharacterized protein 99.8 1.2E-18 4.1E-23 179.1 26.7 263 69-455 19-294 (297)
82 1auo_A Carboxylesterase; hydro 99.8 1.4E-19 4.9E-24 177.5 18.6 197 525-771 5-218 (218)
83 3bdi_A Uncharacterized protein 99.8 2.9E-19 9.9E-24 173.7 19.7 194 515-768 10-206 (207)
84 3cn9_A Carboxylesterase; alpha 99.8 5.7E-19 1.9E-23 174.5 20.8 184 533-770 20-226 (226)
85 3rm3_A MGLP, thermostable mono 99.8 3.8E-19 1.3E-23 180.9 19.5 219 536-770 39-269 (270)
86 4fhz_A Phospholipase/carboxyle 99.8 1.3E-19 4.6E-24 183.9 15.9 198 524-770 55-266 (285)
87 3b5e_A MLL8374 protein; NP_108 99.8 2.4E-19 8.2E-24 176.8 16.7 198 518-770 15-217 (223)
88 4f0j_A Probable hydrolytic enz 99.8 1.3E-18 4.6E-23 180.8 23.3 238 517-768 28-313 (315)
89 4b6g_A Putative esterase; hydr 99.8 6.8E-20 2.3E-24 188.0 13.1 232 516-771 31-283 (283)
90 3mve_A FRSA, UPF0255 protein V 99.8 2.8E-19 9.4E-24 193.0 17.9 229 517-771 176-414 (415)
91 3d7r_A Esterase; alpha/beta fo 99.8 4.2E-19 1.5E-23 186.0 18.8 219 521-770 84-322 (326)
92 2uz0_A Esterase, tributyrin es 99.8 1.1E-19 3.9E-24 184.1 13.8 230 517-771 17-257 (263)
93 1jjf_A Xylanase Z, endo-1,4-be 99.8 5.4E-19 1.9E-23 179.7 18.7 206 517-769 42-260 (268)
94 2h1i_A Carboxylesterase; struc 99.8 6.4E-19 2.2E-23 174.1 18.4 183 535-770 36-226 (226)
95 1jji_A Carboxylesterase; alpha 99.8 8.2E-20 2.8E-24 190.0 12.2 226 516-768 64-310 (311)
96 3c5m_A Oligogalacturonate lyas 99.8 3E-19 1E-23 192.6 16.9 261 101-468 38-330 (396)
97 1k32_A Tricorn protease; prote 99.8 6.1E-18 2.1E-22 205.7 29.6 328 42-454 53-493 (1045)
98 2qjw_A Uncharacterized protein 99.8 1.1E-18 3.7E-23 165.0 17.4 174 535-768 2-175 (176)
99 3u0v_A Lysophospholipase-like 99.8 2.8E-18 9.6E-23 171.0 21.3 194 534-771 20-232 (239)
100 3d0k_A Putative poly(3-hydroxy 99.8 5.6E-19 1.9E-23 183.2 16.3 216 515-768 34-286 (304)
101 1k8q_A Triacylglycerol lipase, 99.8 3.5E-19 1.2E-23 190.6 15.0 251 513-769 32-377 (377)
102 2y6u_A Peroxisomal membrane pr 99.8 8.8E-19 3E-23 189.3 17.9 250 511-770 23-345 (398)
103 1tht_A Thioesterase; 2.10A {Vi 99.8 1.2E-18 4.3E-23 180.0 18.0 220 515-750 14-244 (305)
104 4ezi_A Uncharacterized protein 99.8 3.5E-18 1.2E-22 180.3 20.8 253 512-771 49-371 (377)
105 2r8b_A AGR_C_4453P, uncharacte 99.8 7.9E-19 2.7E-23 176.5 15.2 185 535-771 60-249 (251)
106 2qru_A Uncharacterized protein 99.8 8.3E-18 2.9E-22 171.3 22.7 230 517-769 13-274 (274)
107 2fx5_A Lipase; alpha-beta hydr 99.8 1.9E-18 6.4E-23 174.6 17.3 184 523-770 34-228 (258)
108 1imj_A CIB, CCG1-interacting f 99.8 4.3E-19 1.5E-23 173.0 12.0 191 516-768 14-208 (210)
109 1qlw_A Esterase; anisotropic r 99.8 3.4E-18 1.1E-22 179.1 19.2 200 520-770 49-321 (328)
110 3r0v_A Alpha/beta hydrolase fo 99.8 1.2E-17 4.3E-22 168.5 21.1 222 513-768 7-262 (262)
111 3ia2_A Arylesterase; alpha-bet 99.8 2.4E-18 8.2E-23 175.1 15.7 230 514-767 4-270 (271)
112 1tqh_A Carboxylesterase precur 99.8 3.2E-18 1.1E-22 171.6 16.1 218 537-769 16-245 (247)
113 3o4h_A Acylamino-acid-releasin 99.8 2.5E-18 8.7E-23 195.6 16.8 233 100-454 23-266 (582)
114 3v48_A Aminohydrolase, putativ 99.8 2.1E-18 7.3E-23 175.3 14.2 218 536-770 14-261 (268)
115 1q0r_A RDMC, aclacinomycin met 99.8 1.1E-17 3.6E-22 173.0 19.7 231 516-770 8-294 (298)
116 3azo_A Aminopeptidase; POP fam 99.8 6E-18 2.1E-22 195.8 19.9 272 99-468 24-326 (662)
117 2ojh_A Uncharacterized protein 99.8 4.5E-17 1.6E-21 167.2 24.2 249 45-411 45-294 (297)
118 1brt_A Bromoperoxidase A2; hal 99.8 5.8E-18 2E-22 173.0 17.3 213 538-767 24-276 (277)
119 2pl5_A Homoserine O-acetyltran 99.8 1.7E-17 5.7E-22 176.9 21.6 247 517-769 29-365 (366)
120 1k32_A Tricorn protease; prote 99.8 1.5E-17 5.3E-22 202.1 23.9 326 46-467 19-461 (1045)
121 3fob_A Bromoperoxidase; struct 99.8 9.3E-18 3.2E-22 171.8 18.4 226 515-767 13-280 (281)
122 1zoi_A Esterase; alpha/beta hy 99.8 2.2E-17 7.6E-22 168.5 21.0 230 515-767 6-275 (276)
123 1sfr_A Antigen 85-A; alpha/bet 99.8 5.7E-18 1.9E-22 175.3 16.8 234 518-771 20-284 (304)
124 1a88_A Chloroperoxidase L; hal 99.8 4.1E-17 1.4E-21 166.3 23.0 231 515-767 5-274 (275)
125 1a8s_A Chloroperoxidase F; hal 99.8 3.5E-17 1.2E-21 166.7 22.3 229 515-767 5-272 (273)
126 2yys_A Proline iminopeptidase- 99.8 9.3E-18 3.2E-22 172.3 17.4 229 516-768 10-275 (286)
127 2z3z_A Dipeptidyl aminopeptida 99.8 1.2E-16 4E-21 186.5 28.8 263 100-468 83-392 (706)
128 3sty_A Methylketone synthase 1 99.8 9.3E-18 3.2E-22 170.0 16.9 221 534-769 9-266 (267)
129 4fle_A Esterase; structural ge 99.8 5E-18 1.7E-22 164.4 14.2 187 537-767 2-190 (202)
130 3kxp_A Alpha-(N-acetylaminomet 99.8 5.1E-18 1.8E-22 176.8 15.0 222 517-768 56-314 (314)
131 3vdx_A Designed 16NM tetrahedr 99.8 2.4E-17 8.3E-22 180.5 20.8 231 514-770 9-280 (456)
132 1a8q_A Bromoperoxidase A1; hal 99.8 3.6E-17 1.2E-21 166.7 20.5 227 516-767 6-273 (274)
133 4f21_A Carboxylesterase/phosph 99.8 3.2E-17 1.1E-21 162.9 19.4 203 521-771 25-245 (246)
134 3dqz_A Alpha-hydroxynitrIle ly 99.8 8.8E-18 3E-22 169.2 15.7 218 538-770 5-258 (258)
135 3iii_A COCE/NOND family hydrol 99.8 3.3E-18 1.1E-22 189.3 13.5 242 512-771 45-321 (560)
136 3om8_A Probable hydrolase; str 99.7 6.2E-18 2.1E-22 171.6 14.3 227 514-767 10-265 (266)
137 1r88_A MPT51/MPB51 antigen; AL 99.7 1.5E-17 5.3E-22 169.7 17.0 233 517-770 21-273 (280)
138 3i2k_A Cocaine esterase; alpha 99.7 4.2E-18 1.4E-22 191.4 14.0 243 513-771 14-323 (587)
139 3u1t_A DMMA haloalkane dehalog 99.7 9.3E-18 3.2E-22 173.8 15.4 227 517-770 17-297 (309)
140 3fsg_A Alpha/beta superfamily 99.7 7E-18 2.4E-22 171.2 13.6 217 537-770 21-269 (272)
141 3g8y_A SUSD/RAGB-associated es 99.7 4.7E-18 1.6E-22 182.3 12.5 140 512-654 91-262 (391)
142 2puj_A 2-hydroxy-6-OXO-6-pheny 99.7 1.8E-17 6.2E-22 170.1 16.4 216 537-768 33-285 (286)
143 2ocg_A Valacyclovir hydrolase; 99.7 6.2E-17 2.1E-21 162.9 20.0 228 517-766 10-253 (254)
144 1mtz_A Proline iminopeptidase; 99.7 4E-18 1.4E-22 175.7 11.4 232 517-770 13-293 (293)
145 2r11_A Carboxylesterase NP; 26 99.7 1.6E-17 5.5E-22 172.3 16.0 227 517-767 53-305 (306)
146 2xua_A PCAD, 3-oxoadipate ENOL 99.7 9.8E-18 3.4E-22 170.1 13.8 229 517-768 10-264 (266)
147 3i1i_A Homoserine O-acetyltran 99.7 1.4E-17 4.9E-22 178.1 15.7 246 519-770 27-373 (377)
148 3nwo_A PIP, proline iminopepti 99.7 3.2E-17 1.1E-21 172.0 18.0 236 517-769 36-322 (330)
149 3qit_A CURM TE, polyketide syn 99.7 2.3E-17 7.7E-22 168.5 16.4 210 515-750 10-272 (286)
150 3oos_A Alpha/beta hydrolase fa 99.7 6.3E-18 2.1E-22 172.1 11.9 214 537-766 23-278 (278)
151 1iup_A META-cleavage product h 99.7 1.5E-17 5.1E-22 170.4 14.6 227 517-768 13-272 (282)
152 3qvm_A OLEI00960; structural g 99.7 2.3E-17 7.7E-22 168.3 15.6 219 538-770 29-279 (282)
153 1c4x_A BPHD, protein (2-hydrox 99.7 3.7E-17 1.3E-21 167.7 17.2 232 516-768 14-284 (285)
154 4dnp_A DAD2; alpha/beta hydrol 99.7 2.3E-17 7.8E-22 167.1 15.4 220 536-768 19-268 (269)
155 2qs9_A Retinoblastoma-binding 99.7 2.5E-17 8.6E-22 158.4 14.8 181 536-770 3-186 (194)
156 2qm0_A BES; alpha-beta structu 99.7 7.7E-18 2.6E-22 171.5 11.2 217 517-766 28-272 (275)
157 3d59_A Platelet-activating fac 99.7 1.8E-17 6.2E-22 177.6 14.4 202 521-771 84-351 (383)
158 1hkh_A Gamma lactamase; hydrol 99.7 1.9E-17 6.5E-22 169.3 13.9 213 538-767 24-278 (279)
159 2wue_A 2-hydroxy-6-OXO-6-pheny 99.7 3.9E-17 1.3E-21 168.1 15.6 231 517-768 21-289 (291)
160 3bf7_A Esterase YBFF; thioeste 99.7 2.6E-17 8.9E-22 165.8 13.8 215 536-769 15-255 (255)
161 1b6g_A Haloalkane dehalogenase 99.7 2.5E-17 8.6E-22 171.1 14.0 230 519-768 34-308 (310)
162 3h2g_A Esterase; xanthomonas o 99.7 2.4E-17 8.2E-22 177.6 14.3 137 518-654 60-212 (397)
163 3e0x_A Lipase-esterase related 99.7 6.3E-17 2.2E-21 161.3 16.1 208 536-766 15-245 (245)
164 3hss_A Putative bromoperoxidas 99.7 5.1E-17 1.8E-21 167.1 15.0 216 536-769 42-291 (293)
165 1u2e_A 2-hydroxy-6-ketonona-2, 99.7 9.1E-17 3.1E-21 165.2 16.8 214 538-767 37-287 (289)
166 3r40_A Fluoroacetate dehalogen 99.7 1.4E-16 4.8E-21 164.7 18.1 234 515-769 19-303 (306)
167 2xt0_A Haloalkane dehalogenase 99.7 7E-17 2.4E-21 166.6 15.6 229 519-767 33-296 (297)
168 3nuz_A Putative acetyl xylan e 99.7 1.6E-17 5.6E-22 178.4 11.2 140 512-654 96-267 (398)
169 2b61_A Homoserine O-acetyltran 99.7 1.1E-16 3.8E-21 171.3 17.5 246 517-768 42-376 (377)
170 1gkl_A Endo-1,4-beta-xylanase 99.7 3.4E-16 1.2E-20 160.9 19.7 194 515-749 48-272 (297)
171 1j1i_A META cleavage compound 99.7 1.2E-16 4E-21 164.9 16.2 229 517-770 24-283 (296)
172 1uxo_A YDEN protein; hydrolase 99.7 2.3E-16 8E-21 151.2 16.8 180 537-767 4-188 (192)
173 2wfl_A Polyneuridine-aldehyde 99.7 1.4E-16 4.9E-21 161.3 16.0 218 535-767 8-263 (264)
174 3g9x_A Haloalkane dehalogenase 99.7 2.6E-17 8.8E-22 169.7 9.9 226 516-768 17-292 (299)
175 3afi_E Haloalkane dehalogenase 99.7 1E-16 3.5E-21 167.0 14.5 226 517-769 15-301 (316)
176 3p2m_A Possible hydrolase; alp 99.7 6.9E-17 2.4E-21 169.6 13.2 223 519-768 70-329 (330)
177 3i28_A Epoxide hydrolase 2; ar 99.7 2.4E-16 8.2E-21 178.0 18.6 232 516-770 245-546 (555)
178 1dqz_A 85C, protein (antigen 8 99.7 2E-16 6.8E-21 161.7 16.0 224 538-770 30-278 (280)
179 2xmz_A Hydrolase, alpha/beta h 99.7 2E-16 6.8E-21 160.7 15.8 212 538-769 17-266 (269)
180 3bwx_A Alpha/beta hydrolase; Y 99.7 3.2E-16 1.1E-20 160.7 17.2 231 514-768 11-284 (285)
181 2e3j_A Epoxide hydrolase EPHB; 99.7 1.5E-16 5.1E-21 168.9 15.1 122 516-651 10-131 (356)
182 1xkl_A SABP2, salicylic acid-b 99.7 3.1E-16 1.1E-20 159.6 16.7 218 537-769 4-259 (273)
183 2cjp_A Epoxide hydrolase; HET: 99.7 8.1E-16 2.8E-20 161.2 20.3 237 517-768 19-327 (328)
184 4g9e_A AHL-lactonase, alpha/be 99.7 5E-17 1.7E-21 165.5 10.6 217 536-770 23-270 (279)
185 1wm1_A Proline iminopeptidase; 99.7 1E-15 3.5E-20 159.5 20.5 118 517-651 23-140 (317)
186 2vat_A Acetyl-COA--deacetylcep 99.7 6.4E-17 2.2E-21 177.3 11.5 242 518-770 93-443 (444)
187 3vgz_A Uncharacterized protein 99.7 2.6E-14 8.9E-19 151.0 31.3 282 47-453 46-334 (353)
188 2xdw_A Prolyl endopeptidase; a 99.7 9.3E-16 3.2E-20 178.6 21.9 268 105-466 78-367 (710)
189 3guu_A Lipase A; protein struc 99.7 1.5E-15 5.2E-20 162.0 21.2 245 511-770 80-406 (462)
190 3c6x_A Hydroxynitrilase; atomi 99.7 2.1E-16 7.3E-21 159.3 13.9 217 538-769 4-256 (257)
191 2rau_A Putative esterase; NP_3 99.7 5.9E-17 2E-21 171.9 9.7 224 536-769 49-353 (354)
192 2gop_A Trilobed protease; beta 99.7 4.6E-16 1.6E-20 164.4 16.1 248 100-464 16-290 (347)
193 1l0q_A Surface layer protein; 99.7 9.1E-15 3.1E-19 157.2 26.4 243 100-468 33-276 (391)
194 1ehy_A Protein (soluble epoxid 99.7 1.5E-15 5.2E-20 156.4 19.2 227 517-766 17-293 (294)
195 2qvb_A Haloalkane dehalogenase 99.7 1.4E-16 4.8E-21 163.9 10.9 230 516-769 15-292 (297)
196 1wom_A RSBQ, sigma factor SIGB 99.7 1.3E-16 4.5E-21 162.2 10.5 219 538-770 21-271 (271)
197 3kda_A CFTR inhibitory factor 99.7 2.4E-16 8.3E-21 162.7 12.4 227 515-769 16-294 (301)
198 3bdv_A Uncharacterized protein 99.7 1.9E-15 6.4E-20 144.7 17.6 171 536-770 16-188 (191)
199 2bkl_A Prolyl endopeptidase; m 99.7 2.2E-15 7.4E-20 174.9 20.9 270 101-466 70-350 (695)
200 1azw_A Proline iminopeptidase; 99.7 2.6E-15 8.8E-20 156.1 19.3 118 517-651 20-137 (313)
201 1isp_A Lipase; alpha/beta hydr 99.7 1.1E-15 3.7E-20 145.0 14.7 169 537-769 3-176 (181)
202 1yr2_A Prolyl oligopeptidase; 99.6 4E-15 1.4E-19 174.0 22.1 270 101-466 109-394 (741)
203 3fla_A RIFR; alpha-beta hydrol 99.6 2.8E-16 9.6E-21 159.1 10.6 217 534-769 17-249 (267)
204 1ycd_A Hypothetical 27.3 kDa p 99.6 1.4E-15 4.9E-20 151.8 15.1 203 536-771 4-239 (243)
205 1mj5_A 1,3,4,6-tetrachloro-1,4 99.6 3.9E-16 1.3E-20 161.2 11.2 229 515-770 15-294 (302)
206 3ibt_A 1H-3-hydroxy-4-oxoquino 99.6 5.7E-16 1.9E-20 156.6 12.0 226 517-767 7-263 (264)
207 1pja_A Palmitoyl-protein thioe 99.6 1.6E-15 5.4E-20 156.9 14.6 216 534-766 33-301 (302)
208 1m33_A BIOH protein; alpha-bet 99.6 3.5E-16 1.2E-20 157.8 9.2 207 539-768 15-255 (258)
209 2q0x_A Protein DUF1749, unchar 99.6 2E-15 6.8E-20 158.2 14.9 207 536-769 37-294 (335)
210 1r3d_A Conserved hypothetical 99.6 2.3E-15 7.8E-20 152.4 14.8 210 537-770 16-263 (264)
211 3iuj_A Prolyl endopeptidase; h 99.6 2.1E-14 7.3E-19 166.2 24.3 265 46-432 133-415 (693)
212 3u4y_A Uncharacterized protein 99.6 2.6E-13 8.9E-18 142.0 30.4 267 72-466 20-303 (331)
213 2qmq_A Protein NDRG2, protein 99.6 3.4E-15 1.2E-19 153.0 15.3 235 515-767 17-285 (286)
214 3c8d_A Enterochelin esterase; 99.6 1.3E-15 4.3E-20 163.2 12.1 212 517-769 178-397 (403)
215 3s25_A Hypothetical 7-bladed b 99.6 5E-14 1.7E-18 143.8 22.9 259 51-466 23-292 (302)
216 3l80_A Putative uncharacterize 99.6 4.3E-16 1.5E-20 160.1 7.7 215 537-770 41-290 (292)
217 2psd_A Renilla-luciferin 2-mon 99.6 3.4E-15 1.2E-19 155.6 14.5 225 517-770 29-306 (318)
218 3b12_A Fluoroacetate dehalogen 99.4 6.4E-17 2.2E-21 167.1 0.0 220 536-769 24-292 (304)
219 2gzs_A IROE protein; enterobac 99.6 4.9E-15 1.7E-19 150.6 13.4 212 518-768 24-264 (278)
220 3u4y_A Uncharacterized protein 99.6 4.9E-13 1.7E-17 140.0 28.5 258 46-430 44-312 (331)
221 1pby_B Quinohemoprotein amine 99.6 1.3E-13 4.5E-18 144.4 23.2 261 101-468 36-311 (337)
222 3hfq_A Uncharacterized protein 99.6 2E-13 7E-18 144.0 23.7 266 49-429 47-326 (347)
223 1gxr_A ESG1, transducin-like e 99.6 1.3E-12 4.5E-17 136.6 28.7 265 50-452 60-326 (337)
224 1nr0_A Actin interacting prote 99.6 5.5E-13 1.9E-17 152.2 27.7 313 50-444 27-379 (611)
225 3scy_A Hypothetical bacterial 99.6 8.7E-13 3E-17 140.0 26.6 269 72-453 27-326 (361)
226 1l0q_A Surface layer protein; 99.6 4.3E-13 1.5E-17 144.0 24.4 245 47-429 37-282 (391)
227 2wj6_A 1H-3-hydroxy-4-oxoquina 99.5 3.2E-14 1.1E-18 144.9 14.0 228 517-768 12-271 (276)
228 3vgz_A Uncharacterized protein 99.5 2.6E-12 8.9E-17 135.6 28.8 249 100-467 42-303 (353)
229 3bws_A Protein LP49; two-domai 99.5 1.9E-13 6.5E-18 149.0 20.1 290 101-465 125-430 (433)
230 1nr0_A Actin interacting prote 99.5 4.5E-13 1.6E-17 153.0 23.6 184 50-262 68-258 (611)
231 4gqb_B Methylosome protein 50; 99.5 1.4E-12 4.8E-17 137.2 25.5 231 100-453 84-320 (344)
232 1ri6_A Putative isomerase YBHE 99.5 2.3E-12 8E-17 135.2 27.2 256 49-429 45-317 (343)
233 2ymu_A WD-40 repeat protein; u 99.5 1.5E-13 5.1E-18 155.9 19.1 263 99-451 304-568 (577)
234 1ri6_A Putative isomerase YBHE 99.5 3.9E-12 1.3E-16 133.4 28.7 244 99-452 38-296 (343)
235 3qmv_A Thioesterase, REDJ; alp 99.5 6.6E-15 2.3E-19 150.4 7.1 213 536-765 50-279 (280)
236 3qyj_A ALR0039 protein; alpha/ 99.5 7.7E-14 2.6E-18 143.2 15.0 120 515-650 11-130 (291)
237 3c5v_A PME-1, protein phosphat 99.5 1.3E-13 4.6E-18 143.4 16.8 104 537-650 38-145 (316)
238 3hfq_A Uncharacterized protein 99.5 2.6E-12 8.9E-17 135.5 26.8 275 73-465 17-315 (347)
239 4i19_A Epoxide hydrolase; stru 99.5 1E-13 3.6E-18 147.7 16.0 121 516-651 75-204 (388)
240 2xe4_A Oligopeptidase B; hydro 99.5 1.2E-12 4.2E-17 152.4 25.4 262 45-430 177-466 (751)
241 1qe3_A PNB esterase, para-nitr 99.5 4.5E-15 1.5E-19 162.5 4.3 228 515-751 79-316 (489)
242 3s25_A Hypothetical 7-bladed b 99.5 4.9E-13 1.7E-17 136.4 18.2 235 106-468 21-256 (302)
243 4g56_B MGC81050 protein; prote 99.5 2E-13 6.8E-18 144.7 15.5 284 99-466 43-342 (357)
244 3ow8_A WD repeat-containing pr 99.5 1.4E-12 4.8E-17 135.9 21.7 269 99-451 33-309 (321)
245 4h5i_A Guanine nucleotide-exch 99.5 1.6E-12 5.5E-17 138.1 22.4 236 65-420 97-343 (365)
246 1r5m_A SIR4-interacting protei 99.5 1.6E-12 5.4E-17 140.8 22.9 266 99-452 109-414 (425)
247 3ow8_A WD repeat-containing pr 99.5 5.3E-13 1.8E-17 139.1 17.8 234 99-417 81-318 (321)
248 2ymu_A WD-40 repeat protein; u 99.5 1.2E-12 4E-17 148.5 21.9 264 99-451 263-527 (577)
249 2pm9_A Protein WEB1, protein t 99.5 2.9E-12 9.9E-17 138.6 23.4 293 49-424 20-339 (416)
250 1gxr_A ESG1, transducin-like e 99.5 7.9E-13 2.7E-17 138.3 18.2 279 99-467 10-296 (337)
251 3scy_A Hypothetical bacterial 99.5 2.9E-12 1E-16 135.9 22.3 266 49-430 57-347 (361)
252 3gff_A IROE-like serine hydrol 99.5 1.1E-13 3.8E-18 143.2 10.8 195 518-750 23-250 (331)
253 3zwl_B Eukaryotic translation 99.5 1.1E-11 3.6E-16 131.5 26.1 279 49-467 40-346 (369)
254 2vdu_B TRNA (guanine-N(7)-)-me 99.5 1.9E-11 6.6E-16 133.9 28.0 260 100-466 104-392 (450)
255 3fm0_A Protein CIAO1; WDR39,SG 99.5 5.9E-12 2E-16 132.6 22.9 285 100-452 18-323 (345)
256 1got_B GT-beta; complex (GTP-b 99.4 4.6E-12 1.6E-16 133.2 20.8 268 99-451 56-331 (340)
257 3fle_A SE_1780 protein; struct 99.4 2E-12 6.9E-17 127.8 16.6 211 537-766 6-247 (249)
258 4ery_A WD repeat-containing pr 99.4 1.1E-11 3.8E-16 128.4 22.9 274 99-456 24-303 (312)
259 1jof_A Carboxy-CIS,CIS-muconat 99.4 3.5E-11 1.2E-15 127.8 26.5 270 100-465 41-339 (365)
260 4g56_B MGC81050 protein; prote 99.4 1E-12 3.5E-17 139.2 13.1 286 49-419 50-342 (357)
261 3pic_A CIP2; alpha/beta hydrol 99.4 6.4E-12 2.2E-16 127.5 17.9 217 518-771 89-346 (375)
262 4gqb_B Methylosome protein 50; 99.4 7.2E-12 2.5E-16 131.7 19.2 229 66-419 97-330 (344)
263 3zwl_B Eukaryotic translation 99.4 2.7E-11 9.1E-16 128.3 23.8 245 99-454 33-281 (369)
264 3iz6_a 40S ribosomal protein R 99.4 9.7E-11 3.3E-15 125.1 28.3 275 99-450 67-362 (380)
265 3lcr_A Tautomycetin biosynthet 99.4 5.1E-12 1.8E-16 131.1 17.7 214 535-769 79-302 (319)
266 4h5i_A Guanine nucleotide-exch 99.4 1.7E-11 5.8E-16 130.2 21.9 197 50-359 142-344 (365)
267 3bws_A Protein LP49; two-domai 99.4 7.7E-12 2.6E-16 136.2 19.6 206 201-467 174-390 (433)
268 3vl1_A 26S proteasome regulato 99.4 9.2E-12 3.1E-16 134.9 19.8 278 55-467 61-365 (420)
269 2pbi_B Guanine nucleotide-bind 99.4 2.2E-11 7.4E-16 128.8 21.6 269 99-451 65-345 (354)
270 1erj_A Transcriptional repress 99.4 1.9E-11 6.6E-16 131.3 21.0 264 99-429 65-348 (393)
271 3ei3_B DNA damage-binding prot 99.4 2.6E-10 8.9E-15 121.8 29.6 274 71-465 95-380 (383)
272 4fol_A FGH, S-formylglutathion 99.4 2.8E-12 9.7E-17 130.3 13.4 227 517-771 24-297 (299)
273 4g4g_A 4-O-methyl-glucuronoyl 99.4 1.6E-11 5.4E-16 125.9 18.7 215 519-771 123-380 (433)
274 3ds8_A LIN2722 protein; unkonw 99.4 1.6E-12 5.6E-17 130.2 11.0 210 538-770 4-243 (254)
275 3g02_A Epoxide hydrolase; alph 99.4 3.2E-12 1.1E-16 136.6 13.8 119 517-649 93-218 (408)
276 3fm0_A Protein CIAO1; WDR39,SG 99.4 3.9E-11 1.3E-15 126.4 21.6 299 49-419 24-334 (345)
277 2j04_A TAU60, YPL007P, hypothe 99.3 2.5E-11 8.6E-16 131.6 19.8 259 99-463 16-295 (588)
278 3frx_A Guanine nucleotide-bind 99.3 4E-11 1.4E-15 124.7 20.7 243 99-419 66-316 (319)
279 1jmx_B Amine dehydrogenase; ox 99.3 3.4E-11 1.1E-15 126.7 20.2 262 103-468 4-326 (349)
280 2ynn_A Coatomer subunit beta'; 99.3 2.2E-11 7.7E-16 125.7 18.4 262 99-446 14-284 (304)
281 1kez_A Erythronolide synthase; 99.3 2E-12 6.8E-17 133.3 10.3 209 533-769 63-281 (300)
282 3sfz_A APAF-1, apoptotic pepti 99.3 3.5E-11 1.2E-15 149.4 23.2 235 154-468 963-1208(1249)
283 1vyh_C Platelet-activating fac 99.3 1.6E-11 5.6E-16 132.6 17.5 269 65-417 123-408 (410)
284 2d81_A PHB depolymerase; alpha 99.3 2.2E-12 7.4E-17 131.9 9.9 148 611-769 6-175 (318)
285 1got_B GT-beta; complex (GTP-b 99.3 1.9E-11 6.4E-16 128.5 17.4 260 69-416 74-339 (340)
286 3i2n_A WD repeat-containing pr 99.3 3.2E-11 1.1E-15 127.2 19.0 291 99-466 19-352 (357)
287 1vyh_C Platelet-activating fac 99.3 5.5E-11 1.9E-15 128.4 21.0 267 99-451 109-399 (410)
288 3lp5_A Putative cell surface h 99.3 1.2E-11 4E-16 122.2 14.1 198 538-767 5-232 (250)
289 1jof_A Carboxy-CIS,CIS-muconat 99.3 1.1E-10 3.9E-15 123.8 22.9 256 49-421 47-342 (365)
290 3mkq_A Coatomer beta'-subunit; 99.3 1.7E-11 5.6E-16 145.3 17.9 235 48-361 20-262 (814)
291 1pby_B Quinohemoprotein amine 99.3 6.2E-11 2.1E-15 123.8 20.3 228 125-468 12-270 (337)
292 4e54_B DNA damage-binding prot 99.3 3.3E-10 1.1E-14 123.4 26.6 265 65-449 135-417 (435)
293 3dw8_B Serine/threonine-protei 99.3 1.2E-10 4.1E-15 127.2 23.1 179 195-429 176-380 (447)
294 1r5m_A SIR4-interacting protei 99.3 6.1E-11 2.1E-15 128.3 20.5 289 99-468 46-362 (425)
295 3frx_A Guanine nucleotide-bind 99.3 5E-11 1.7E-15 124.0 18.4 270 99-452 18-306 (319)
296 3dwl_C Actin-related protein 2 99.3 1.1E-11 3.7E-16 132.3 13.6 234 100-449 13-268 (377)
297 1ukc_A ESTA, esterase; fungi, 99.3 1.5E-12 5.3E-17 143.5 6.2 222 515-750 82-327 (522)
298 3sfz_A APAF-1, apoptotic pepti 99.3 2.8E-11 9.6E-16 150.3 18.3 272 100-451 963-1237(1249)
299 2xzm_R RACK1; ribosome, transl 99.3 1.1E-10 3.9E-15 122.6 20.2 248 99-419 77-339 (343)
300 1tca_A Lipase; hydrolase(carbo 99.3 2.9E-12 9.9E-17 132.2 7.6 215 520-768 15-243 (317)
301 4aez_A CDC20, WD repeat-contai 99.3 3.8E-10 1.3E-14 121.4 24.6 273 59-468 100-381 (401)
302 2pbi_B Guanine nucleotide-bind 99.3 7.4E-11 2.5E-15 124.7 18.7 261 69-416 83-353 (354)
303 3mkq_A Coatomer beta'-subunit; 99.3 3.9E-11 1.3E-15 142.0 17.9 263 99-447 14-285 (814)
304 2k2q_B Surfactin synthetase th 99.3 2.8E-12 9.7E-17 127.6 6.7 208 535-768 11-236 (242)
305 3ils_A PKS, aflatoxin biosynth 99.3 2E-11 6.7E-16 123.3 12.8 211 534-766 18-264 (265)
306 4ery_A WD repeat-containing pr 99.3 1.3E-10 4.5E-15 120.3 19.2 273 49-418 31-310 (312)
307 2pm9_A Protein WEB1, protein t 99.3 2.8E-11 9.5E-16 130.8 14.6 292 100-468 14-338 (416)
308 3i2n_A WD repeat-containing pr 99.3 2.1E-10 7.1E-15 120.9 20.9 293 49-418 26-351 (357)
309 1nir_A Nitrite reductase; hemo 99.3 6.7E-10 2.3E-14 124.0 25.9 267 100-468 223-515 (543)
310 1jmx_B Amine dehydrogenase; ox 99.3 4.5E-10 1.5E-14 117.9 22.8 113 100-252 44-160 (349)
311 2aq5_A Coronin-1A; WD40 repeat 99.3 3E-10 1E-14 122.3 21.7 256 70-448 55-329 (402)
312 1k8k_C P40, ARP2/3 complex 41 99.3 6.7E-10 2.3E-14 117.8 24.1 252 49-420 16-274 (372)
313 2mad_H Methylamine dehydrogena 99.2 1.4E-08 4.7E-13 107.5 33.6 258 103-468 70-351 (373)
314 2ynn_A Coatomer subunit beta'; 99.2 6.2E-11 2.1E-15 122.4 15.2 234 50-361 22-262 (304)
315 2vdu_B TRNA (guanine-N(7)-)-me 99.2 6.3E-10 2.2E-14 121.8 23.2 176 217-465 124-337 (450)
316 3vl1_A 26S proteasome regulato 99.2 1.9E-10 6.6E-15 124.4 18.8 256 101-468 59-323 (420)
317 1k8k_C P40, ARP2/3 complex 41 99.2 7.5E-10 2.6E-14 117.4 23.0 249 99-467 9-274 (372)
318 2xzm_R RACK1; ribosome, transl 99.2 4.7E-10 1.6E-14 117.9 20.8 276 99-451 22-328 (343)
319 3dm0_A Maltose-binding peripla 99.2 5.3E-10 1.8E-14 129.7 22.9 279 67-418 400-691 (694)
320 3dwl_C Actin-related protein 2 99.2 7.9E-11 2.7E-15 125.5 14.3 210 50-361 20-239 (377)
321 3jrp_A Fusion protein of prote 99.2 1.8E-09 6.2E-14 114.6 24.9 244 99-466 12-286 (379)
322 1sq9_A Antiviral protein SKI8; 99.2 2.3E-10 7.9E-15 122.7 17.9 292 68-419 32-394 (397)
323 3lrv_A PRE-mRNA-splicing facto 99.2 7.7E-09 2.6E-13 108.5 28.9 164 155-426 128-298 (343)
324 2pm7_B Protein transport prote 99.2 1.4E-09 4.7E-14 111.7 22.6 234 99-452 10-274 (297)
325 3k26_A Polycomb protein EED; W 99.2 8.8E-09 3E-13 108.6 29.3 290 51-452 31-355 (366)
326 1pgu_A Actin interacting prote 99.2 2.7E-09 9.4E-14 121.5 26.9 277 50-466 27-327 (615)
327 4e54_B DNA damage-binding prot 99.2 3E-09 1E-13 115.8 25.9 206 99-425 120-330 (435)
328 2j04_A TAU60, YPL007P, hypothe 99.2 1.1E-10 3.8E-15 126.6 13.3 184 99-336 86-287 (588)
329 4aow_A Guanine nucleotide-bind 99.2 1.3E-09 4.5E-14 113.9 21.1 286 99-468 39-338 (340)
330 1erj_A Transcriptional repress 99.2 3.5E-09 1.2E-13 113.5 24.3 246 49-419 131-388 (393)
331 4aez_A CDC20, WD repeat-contai 99.2 3.6E-09 1.2E-13 113.7 24.3 239 101-467 96-336 (401)
332 2h7c_A Liver carboxylesterase 99.2 2.8E-11 9.7E-16 134.2 7.6 133 515-652 95-233 (542)
333 3ei3_B DNA damage-binding prot 99.1 4.1E-09 1.4E-13 112.4 24.0 204 99-424 74-284 (383)
334 3dm0_A Maltose-binding peripla 99.1 6.7E-10 2.3E-14 128.8 19.1 244 99-427 383-637 (694)
335 2aq5_A Coronin-1A; WD40 repeat 99.1 1.5E-09 5E-14 116.9 20.3 183 218-468 104-300 (402)
336 1ei9_A Palmitoyl protein thioe 99.1 5.8E-10 2E-14 112.8 15.1 106 538-650 6-115 (279)
337 1thg_A Lipase; hydrolase(carbo 99.1 3.8E-11 1.3E-15 133.0 6.8 226 515-750 102-359 (544)
338 1yfq_A Cell cycle arrest prote 99.1 2.3E-09 7.9E-14 112.2 20.2 241 99-468 12-283 (342)
339 4aow_A Guanine nucleotide-bind 99.1 4.3E-09 1.5E-13 110.0 22.2 276 70-424 59-339 (340)
340 1sq9_A Antiviral protein SKI8; 99.1 1.8E-09 6.2E-14 115.7 19.5 273 99-444 17-366 (397)
341 1yfq_A Cell cycle arrest prote 99.1 1.2E-08 4.3E-13 106.5 25.5 275 50-455 20-315 (342)
342 2hes_X YDR267CP; beta-propelle 99.1 1.3E-08 4.6E-13 106.0 25.6 261 67-449 29-314 (330)
343 3iz6_a 40S ribosomal protein R 99.1 6.6E-10 2.2E-14 118.6 15.7 271 67-418 83-373 (380)
344 3e5z_A Putative gluconolactona 99.1 2.2E-08 7.6E-13 102.5 26.1 251 101-468 30-287 (296)
345 1nir_A Nitrite reductase; hemo 99.1 7.4E-09 2.5E-13 115.6 23.5 236 105-467 144-402 (543)
346 1llf_A Lipase 3; candida cylin 99.1 3.6E-11 1.2E-15 132.9 4.4 131 515-650 94-243 (534)
347 4gga_A P55CDC, cell division c 99.1 1.9E-09 6.6E-14 116.7 17.9 266 71-418 124-393 (420)
348 1pgu_A Actin interacting prote 99.1 3.1E-09 1.1E-13 121.0 20.5 241 99-467 19-283 (615)
349 1gpl_A RP2 lipase; serine este 99.1 6.6E-11 2.2E-15 127.5 6.0 112 535-651 68-181 (432)
350 3jrp_A Fusion protein of prote 99.1 5.5E-09 1.9E-13 110.8 20.8 238 49-420 19-287 (379)
351 4a11_B DNA excision repair pro 99.1 1.3E-07 4.3E-12 101.4 31.7 259 99-468 100-366 (408)
352 3dr2_A Exported gluconolactona 99.1 2.2E-08 7.5E-13 103.1 24.2 251 101-464 47-303 (305)
353 2oiz_A Aromatic amine dehydrog 99.1 1E-07 3.4E-12 100.7 29.5 122 321-468 204-335 (361)
354 3odt_A Protein DOA1; ubiquitin 99.0 7E-09 2.4E-13 106.8 19.7 271 99-468 19-297 (313)
355 2pm7_B Protein transport prote 99.0 9.5E-09 3.3E-13 105.4 20.5 242 50-426 18-290 (297)
356 3bg1_A Protein SEC13 homolog; 99.0 8.6E-09 2.9E-13 106.8 20.3 233 99-452 14-282 (316)
357 2xyi_A Probable histone-bindin 99.0 1.2E-08 4.2E-13 110.7 22.0 180 218-465 204-408 (430)
358 2ogt_A Thermostable carboxyles 99.0 4E-10 1.4E-14 123.6 10.0 134 515-652 81-224 (498)
359 2dg1_A DRP35, lactonase; beta 99.0 5.1E-08 1.7E-12 101.7 25.6 258 101-466 47-315 (333)
360 3g4e_A Regucalcin; six bladed 99.0 4.6E-08 1.6E-12 100.2 24.6 243 101-455 15-264 (297)
361 2xyi_A Probable histone-bindin 99.0 7E-09 2.4E-13 112.7 19.5 148 218-419 254-409 (430)
362 4gga_A P55CDC, cell division c 99.0 9.9E-08 3.4E-12 103.1 28.3 246 99-467 106-353 (420)
363 3sjl_D Methylamine dehydrogena 99.0 4.4E-07 1.5E-11 94.7 31.5 125 321-468 230-364 (386)
364 3dw8_B Serine/threonine-protei 99.0 1.5E-08 5.2E-13 110.3 21.6 158 99-361 178-376 (447)
365 4ggc_A P55CDC, cell division c 99.0 1.3E-08 4.3E-13 105.2 19.6 263 72-418 45-313 (318)
366 3c75_H MADH, methylamine dehyd 99.0 1.5E-07 5E-12 100.2 27.7 300 51-468 82-403 (426)
367 3jro_A Fusion protein of prote 99.0 7.3E-09 2.5E-13 121.0 19.5 230 99-451 10-273 (753)
368 2ha2_A ACHE, acetylcholinester 99.0 3E-10 1E-14 126.0 7.2 132 515-651 93-232 (543)
369 3mmy_A MRNA export factor; mRN 99.0 4.3E-08 1.5E-12 103.3 23.6 109 99-287 40-158 (368)
370 1qks_A Cytochrome CD1 nitrite 99.0 2.1E-07 7.3E-12 103.6 30.0 366 17-468 113-539 (567)
371 2j04_B YDR362CP, TAU91; beta p 99.0 3.8E-09 1.3E-13 117.1 15.5 304 66-445 177-496 (524)
372 2ghs_A AGR_C_1268P; regucalcin 99.0 9.2E-08 3.1E-12 99.4 24.4 236 101-455 51-294 (326)
373 3f3f_A Nucleoporin SEH1; struc 99.0 9.6E-08 3.3E-12 99.5 24.5 201 99-420 12-249 (351)
374 2oaj_A Protein SNI1; WD40 repe 99.0 4.2E-08 1.4E-12 116.5 23.7 213 99-427 18-247 (902)
375 3bg1_A Protein SEC13 homolog; 99.0 2.9E-08 9.8E-13 102.8 19.6 246 50-428 22-300 (316)
376 3vu4_A KMHSV2; beta-propeller 98.9 3.8E-08 1.3E-12 103.8 20.8 230 99-418 20-269 (355)
377 3icv_A Lipase B, CALB; circula 98.9 2.7E-09 9.3E-14 107.7 11.2 117 521-652 50-170 (316)
378 1jmk_C SRFTE, surfactin synthe 98.9 2.8E-09 9.7E-14 104.8 11.2 198 537-767 17-227 (230)
379 2fj0_A JuvenIle hormone estera 98.9 2.4E-10 8.1E-15 127.0 3.7 131 515-651 87-233 (551)
380 3v7d_B Cell division control p 98.9 5.2E-07 1.8E-11 98.7 30.3 295 61-453 131-452 (464)
381 3odt_A Protein DOA1; ubiquitin 98.9 1E-08 3.5E-13 105.5 15.6 266 65-425 32-299 (313)
382 3f3f_A Nucleoporin SEH1; struc 98.9 4.2E-08 1.4E-12 102.3 19.9 199 50-359 20-250 (351)
383 2bce_A Cholesterol esterase; h 98.9 4.7E-10 1.6E-14 124.6 5.1 131 515-650 77-222 (579)
384 2cb9_A Fengycin synthetase; th 98.9 2.7E-09 9.1E-14 106.0 9.9 192 536-769 21-225 (244)
385 1ex9_A Lactonizing lipase; alp 98.9 2.8E-09 9.5E-14 108.3 9.8 101 536-651 6-109 (285)
386 3k26_A Polycomb protein EED; W 98.9 3.4E-08 1.1E-12 104.1 18.6 238 70-417 93-363 (366)
387 1p0i_A Cholinesterase; serine 98.9 2.8E-09 9.5E-14 118.0 10.1 131 515-651 89-227 (529)
388 1bu8_A Protein (pancreatic lip 98.9 9.6E-10 3.3E-14 118.6 6.2 112 535-651 68-181 (452)
389 3jro_A Fusion protein of prote 98.9 7.6E-08 2.6E-12 112.4 22.4 241 45-419 13-284 (753)
390 1ea5_A ACHE, acetylcholinester 98.9 3E-09 1E-13 117.6 9.9 131 515-651 91-229 (537)
391 4a11_B DNA excision repair pro 98.9 1.7E-07 5.9E-12 100.3 23.6 227 99-427 44-281 (408)
392 1ys1_X Lipase; CIS peptide Leu 98.9 5.9E-09 2E-13 107.2 10.7 105 535-651 6-114 (320)
393 3mmy_A MRNA export factor; mRN 98.9 3E-08 1E-12 104.5 16.5 251 71-408 63-335 (368)
394 1w52_X Pancreatic lipase relat 98.9 1.6E-09 5.5E-14 116.9 6.6 112 535-651 68-181 (452)
395 2hes_X YDR267CP; beta-propelle 98.9 1.7E-07 6E-12 97.5 22.0 199 99-419 15-229 (330)
396 3gre_A Serine/threonine-protei 98.9 2E-07 6.7E-12 101.2 23.1 261 65-427 79-364 (437)
397 4ggc_A P55CDC, cell division c 98.9 1.1E-06 3.7E-11 90.5 27.6 244 101-467 28-273 (318)
398 2x5x_A PHB depolymerase PHAZ7; 98.9 6.4E-09 2.2E-13 107.3 10.3 121 522-652 29-166 (342)
399 2oiz_A Aromatic amine dehydrog 98.8 2.5E-07 8.5E-12 97.6 22.2 99 321-445 258-360 (361)
400 2mad_H Methylamine dehydrogena 98.8 5.5E-07 1.9E-11 95.1 24.8 84 322-428 272-356 (373)
401 1dx4_A ACHE, acetylcholinester 98.8 8.6E-09 2.9E-13 115.2 10.9 118 534-651 138-267 (585)
402 2hfk_A Pikromycin, type I poly 98.8 3.4E-09 1.2E-13 109.9 7.1 208 539-769 91-311 (319)
403 3n2z_B Lysosomal Pro-X carboxy 98.8 1.6E-08 5.6E-13 107.9 12.4 109 536-649 38-159 (446)
404 3tej_A Enterobactin synthase c 98.8 1.2E-08 4.1E-13 106.2 11.0 210 536-766 100-327 (329)
405 3bix_A Neuroligin-1, neuroligi 98.8 2.5E-09 8.7E-14 119.2 6.1 129 515-650 108-248 (574)
406 4gq1_A NUP37; propeller, trans 98.8 9.7E-08 3.3E-12 102.2 18.2 258 103-451 94-378 (393)
407 4gq1_A NUP37; propeller, trans 98.8 1.1E-07 3.9E-12 101.6 18.2 90 66-171 105-206 (393)
408 3sjl_D Methylamine dehydrogena 98.8 1.7E-06 5.8E-11 90.3 25.5 101 320-443 283-384 (386)
409 3vu4_A KMHSV2; beta-propeller 98.8 4.2E-07 1.4E-11 95.7 21.2 188 100-360 60-273 (355)
410 2j04_B YDR362CP, TAU91; beta p 98.8 9.6E-08 3.3E-12 105.7 16.4 164 218-451 235-416 (524)
411 3gre_A Serine/threonine-protei 98.8 3.6E-07 1.2E-11 99.1 20.7 205 99-428 64-298 (437)
412 3e5z_A Putative gluconolactona 98.7 1E-06 3.5E-11 90.0 22.4 252 47-427 33-291 (296)
413 2ece_A 462AA long hypothetical 98.7 3.2E-06 1.1E-10 88.7 25.9 200 216-451 162-399 (462)
414 2zyr_A Lipase, putative; fatty 98.7 7E-09 2.4E-13 110.4 5.8 111 535-652 20-167 (484)
415 3c75_H MADH, methylamine dehyd 98.7 1.2E-06 4.1E-11 93.1 22.9 84 322-428 324-408 (426)
416 1hpl_A Lipase; hydrolase(carbo 98.7 8.4E-09 2.9E-13 110.5 6.2 112 535-651 67-180 (449)
417 2oaj_A Protein SNI1; WD40 repe 98.7 2.7E-07 9.2E-12 109.6 19.6 201 156-466 21-241 (902)
418 1qks_A Cytochrome CD1 nitrite 98.7 7.2E-07 2.5E-11 99.3 21.6 240 103-467 158-421 (567)
419 2dg1_A DRP35, lactonase; beta 98.7 2.5E-06 8.6E-11 88.6 23.7 236 72-421 66-315 (333)
420 1rp1_A Pancreatic lipase relat 98.7 1E-08 3.6E-13 109.8 5.4 111 535-651 68-180 (450)
421 1npe_A Nidogen, entactin; glyc 98.7 8.6E-06 2.9E-10 81.7 26.3 204 100-428 37-244 (267)
422 1mda_H Methylamine dehydrogena 98.7 2.3E-06 8E-11 89.4 22.3 123 324-468 218-347 (368)
423 3v7d_B Cell division control p 98.6 1E-06 3.5E-11 96.3 20.2 273 105-468 127-422 (464)
424 3lrv_A PRE-mRNA-splicing facto 98.6 2.7E-06 9.3E-11 88.9 22.3 156 99-359 126-293 (343)
425 3dr2_A Exported gluconolactona 98.6 1.5E-06 5E-11 89.3 19.2 252 46-420 49-304 (305)
426 3dsm_A Uncharacterized protein 98.6 1.6E-06 5.4E-11 90.1 19.6 189 218-466 105-301 (328)
427 1npe_A Nidogen, entactin; glyc 98.6 4.6E-06 1.6E-10 83.7 22.2 179 218-467 58-238 (267)
428 3tjm_A Fatty acid synthase; th 98.6 6.1E-08 2.1E-12 98.5 7.7 96 536-651 23-124 (283)
429 3dsm_A Uncharacterized protein 98.6 8.3E-06 2.8E-10 84.6 23.5 150 218-426 152-305 (328)
430 2ece_A 462AA long hypothetical 98.6 8.5E-06 2.9E-10 85.6 22.7 87 318-426 322-430 (462)
431 3hrp_A Uncharacterized protein 98.5 1E-05 3.6E-10 86.5 23.9 217 99-430 131-362 (409)
432 2ghs_A AGR_C_1268P; regucalcin 98.5 3.7E-06 1.2E-10 87.2 19.7 233 46-411 53-294 (326)
433 2dst_A Hypothetical protein TT 98.5 2.4E-07 8.3E-12 81.7 8.9 82 537-639 22-103 (131)
434 2w18_A PALB2, fancn, partner a 98.5 8.6E-06 2.9E-10 82.9 20.7 114 157-338 231-348 (356)
435 2w18_A PALB2, fancn, partner a 98.5 8.3E-06 2.8E-10 83.0 19.9 231 97-418 110-355 (356)
436 3g4e_A Regucalcin; six bladed 98.5 2.8E-06 9.7E-11 86.7 16.7 201 156-466 16-228 (297)
437 2ovr_B FBW7, F-BOX/WD repeat p 98.4 1.4E-05 4.8E-10 86.7 22.5 302 65-467 132-442 (445)
438 2oit_A Nucleoporin 214KDA; NH2 98.4 2.5E-05 8.6E-10 84.3 23.1 168 100-359 94-279 (434)
439 2oit_A Nucleoporin 214KDA; NH2 98.4 5.5E-06 1.9E-10 89.5 17.1 94 217-357 117-222 (434)
440 2hih_A Lipase 46 kDa form; A1 98.4 1.2E-06 4.1E-11 93.0 10.8 107 536-651 51-212 (431)
441 1fwx_A Nitrous oxide reductase 98.4 6.2E-06 2.1E-10 89.8 16.4 114 99-253 85-208 (595)
442 1pjx_A Dfpase, DIISOPROPYLFLUO 98.4 7E-05 2.4E-09 76.7 24.0 196 218-466 92-298 (314)
443 2dsn_A Thermostable lipase; T1 98.3 2.4E-06 8.3E-11 89.3 11.1 103 536-651 5-164 (387)
444 1ijq_A LDL receptor, low-densi 98.3 0.00013 4.4E-09 75.0 24.1 229 112-468 3-239 (316)
445 3fvz_A Peptidyl-glycine alpha- 98.3 0.00038 1.3E-08 71.9 27.4 115 319-466 198-321 (329)
446 2iwa_A Glutamine cyclotransfer 98.3 4.2E-05 1.4E-09 75.4 18.8 181 217-468 43-238 (266)
447 3v65_B Low-density lipoprotein 98.3 0.00015 5E-09 76.9 24.0 178 218-465 138-316 (386)
448 1mda_H Methylamine dehydrogena 98.2 4.4E-05 1.5E-09 79.7 19.0 83 322-430 269-354 (368)
449 2iwa_A Glutamine cyclotransfer 98.2 4.8E-05 1.7E-09 75.0 18.0 204 102-422 24-237 (266)
450 2qe8_A Uncharacterized protein 98.2 0.00026 8.8E-09 73.7 24.6 111 319-452 197-309 (343)
451 3v64_C Agrin; beta propeller, 98.2 0.00026 8.9E-09 73.8 24.5 177 218-464 95-272 (349)
452 1rwi_B Serine/threonine-protei 98.2 0.00015 5E-09 72.4 21.8 174 218-465 87-262 (270)
453 1fwx_A Nitrous oxide reductase 98.2 2.4E-05 8.3E-10 85.2 16.4 104 218-358 254-361 (595)
454 2p4o_A Hypothetical protein; p 98.2 0.00036 1.2E-08 71.3 24.7 228 101-453 34-278 (306)
455 3v64_C Agrin; beta propeller, 98.2 0.00064 2.2E-08 70.8 26.2 162 99-360 73-236 (349)
456 3v65_B Low-density lipoprotein 98.1 0.00029 1E-08 74.5 23.5 161 99-360 116-279 (386)
457 3p5b_L Low density lipoprotein 98.1 0.00033 1.1E-08 74.5 23.9 182 218-468 134-321 (400)
458 3hrp_A Uncharacterized protein 98.1 0.00038 1.3E-08 74.3 23.3 158 104-360 176-356 (409)
459 3sov_A LRP-6, low-density lipo 98.1 0.00063 2.1E-08 69.7 23.4 160 100-360 36-199 (318)
460 2ovr_B FBW7, F-BOX/WD repeat p 98.1 0.00032 1.1E-08 75.9 22.4 264 105-468 124-392 (445)
461 1p22_A F-BOX/WD-repeat protein 98.0 8.7E-05 3E-09 80.2 15.8 185 104-361 137-328 (435)
462 1ijq_A LDL receptor, low-densi 98.0 0.0011 3.7E-08 68.0 22.9 161 99-360 30-197 (316)
463 3no2_A Uncharacterized protein 97.9 0.0011 3.8E-08 66.4 22.1 111 319-464 127-250 (276)
464 1rwi_B Serine/threonine-protei 97.9 0.00043 1.5E-08 68.9 19.1 134 218-421 129-263 (270)
465 1q7f_A NHL, brain tumor CG1071 97.9 0.0036 1.2E-07 62.8 25.9 175 218-465 100-278 (286)
466 3sov_A LRP-6, low-density lipo 97.9 0.00092 3.2E-08 68.4 21.5 181 218-468 57-239 (318)
467 3p5b_L Low density lipoprotein 97.9 0.0011 3.9E-08 70.3 22.2 162 99-361 112-280 (400)
468 3nol_A Glutamine cyclotransfer 97.9 0.00029 9.8E-09 68.6 15.6 178 217-466 64-255 (262)
469 1n7d_A LDL receptor, low-densi 97.9 9.7E-05 3.3E-09 84.6 13.9 179 218-466 428-613 (699)
470 3m0c_C LDL receptor, low-densi 97.8 0.003 1E-07 72.7 25.1 182 218-468 446-633 (791)
471 1p22_A F-BOX/WD-repeat protein 97.8 0.00081 2.8E-08 72.5 19.2 211 70-360 151-367 (435)
472 1n7d_A LDL receptor, low-densi 97.8 0.00022 7.5E-09 81.6 15.1 146 217-429 474-621 (699)
473 1whs_A Serine carboxypeptidase 97.7 0.00019 6.6E-09 69.6 11.9 135 517-655 30-190 (255)
474 4a0p_A LRP6, LRP-6, low-densit 97.7 0.0044 1.5E-07 69.7 24.9 162 99-360 37-199 (628)
475 3nol_A Glutamine cyclotransfer 97.7 0.0017 5.7E-08 63.2 17.3 202 102-420 46-254 (262)
476 4ebb_A Dipeptidyl peptidase 2; 97.6 0.00025 8.7E-09 76.6 12.3 112 536-651 42-163 (472)
477 3m0c_C LDL receptor, low-densi 97.6 0.0041 1.4E-07 71.6 23.0 163 99-361 424-592 (791)
478 3s94_A LRP-6, low-density lipo 97.6 0.0044 1.5E-07 69.6 22.7 205 99-426 40-247 (619)
479 2fp8_A Strictosidine synthase; 97.6 0.0032 1.1E-07 64.6 19.8 194 219-466 102-312 (322)
480 4a0p_A LRP6, LRP-6, low-densit 97.6 0.011 3.7E-07 66.5 25.0 178 218-468 59-238 (628)
481 1ivy_A Human protective protei 97.6 0.00037 1.3E-08 74.4 12.1 123 518-653 31-183 (452)
482 3fvz_A Peptidyl-glycine alpha- 97.6 0.0067 2.3E-07 62.4 21.4 156 217-429 68-234 (329)
483 2z2n_A Virginiamycin B lyase; 97.6 0.014 4.8E-07 58.5 23.5 274 99-466 15-294 (299)
484 3mbr_X Glutamine cyclotransfer 97.5 0.005 1.7E-07 59.3 18.5 178 217-466 42-234 (243)
485 3qqz_A Putative uncharacterize 97.5 0.012 4.1E-07 57.5 21.2 210 99-422 27-253 (255)
486 3qqz_A Putative uncharacterize 97.5 0.022 7.7E-07 55.5 23.0 201 155-464 29-250 (255)
487 2qc5_A Streptogramin B lactona 97.5 0.036 1.2E-06 55.5 25.3 171 218-465 83-258 (300)
488 1q7f_A NHL, brain tumor CG1071 97.5 0.0037 1.3E-07 62.7 17.6 94 218-357 142-237 (286)
489 3nok_A Glutaminyl cyclase; bet 97.4 0.0029 1E-07 61.5 14.8 175 218-465 75-264 (268)
490 1pjx_A Dfpase, DIISOPROPYLFLUO 97.4 0.016 5.5E-07 58.7 21.3 161 100-360 118-301 (314)
491 3no2_A Uncharacterized protein 97.3 0.0043 1.5E-07 62.1 16.1 185 213-468 10-196 (276)
492 2p4o_A Hypothetical protein; p 97.2 0.066 2.2E-06 54.2 23.7 40 100-141 73-113 (306)
493 2qe8_A Uncharacterized protein 97.2 0.0054 1.9E-07 63.5 15.6 68 99-172 67-138 (343)
494 2px6_A Thioesterase domain; th 97.2 0.00092 3.2E-08 68.5 9.3 96 535-650 44-145 (316)
495 3s94_A LRP-6, low-density lipo 97.2 0.089 3E-06 59.0 25.9 207 99-428 349-557 (619)
496 3mbr_X Glutamine cyclotransfer 97.1 0.044 1.5E-06 52.7 19.2 205 101-421 23-234 (243)
497 3nok_A Glutaminyl cyclase; bet 97.0 0.02 6.9E-07 55.6 15.7 144 217-420 115-264 (268)
498 4az3_A Lysosomal protective pr 96.8 0.017 5.7E-07 57.4 14.2 129 517-654 32-186 (300)
499 3tc9_A Hypothetical hydrolase; 96.8 0.019 6.6E-07 61.3 16.1 158 100-358 138-301 (430)
500 3sre_A PON1, serum paraoxonase 96.8 0.18 6E-06 51.9 22.5 109 217-359 140-253 (355)
No 1
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=7.1e-56 Score=519.89 Aligned_cols=610 Identities=15% Similarity=0.180 Sum_probs=427.8
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeE
Q 004149 47 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 126 (771)
Q Consensus 47 ~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 126 (771)
.+.||||++|+|.......-+......+|++++.+ ++.++|+..+ +.+..|+|||||++|||+++. .+
T Consensus 67 ~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~--~~~~~l~~~~-----~~~~~~~~SPdG~~la~~~~~-----~i 134 (740)
T 4a5s_A 67 YSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNK--RQLITEERIP-----NNTQWVTWSPVGHKLAYVWNN-----DI 134 (740)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT--TEECCSSCCC-----TTEEEEEECSSTTCEEEEETT-----EE
T ss_pred eEECCCCCEEEEEECCeeeEEEccceEEEEEECCC--CcEEEcccCC-----CcceeeEECCCCCEEEEEECC-----eE
Confidence 34589999999988654333334457888988743 3556665543 568899999999999999764 38
Q ss_pred EEEe-cCCcceEEEecCC------cccccccCC---CcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCC
Q 004149 127 FELW-SQSQLEKEFHVPQ------TVHGSVYAD---GWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCN 196 (771)
Q Consensus 127 ~~~~-~~~~~~~~~~~~~------~~~g~~~~~---~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (771)
+.++ .+++.++++.... +....||.+ +....+.|||||++|||.+.+..... .|......... ...
T Consensus 135 ~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~-~~~~~~~~~~~---~~~ 210 (740)
T 4a5s_A 135 YVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVP-LIEYSFYSDES---LQY 210 (740)
T ss_dssp EEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCC-EEEEEECCSTT---CSS
T ss_pred EEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCc-eEEEEeecCCC---CCC
Confidence 8777 5666666654211 111112221 11236899999999999986654221 11110000000 000
Q ss_pred CCCCcccccCCcCcccCCccCceEEEEEccC---C---ceeeccCCC-----CCCccceEEEecCCCCCccEEEEEeecC
Q 004149 197 SWKGQGDWEEDWGETYAGKRQPSLFVININS---G---EVQAVKGIP-----KSLSVGQVVWAPLNEGLHQYLVFVGWSS 265 (771)
Q Consensus 197 ~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~---~---~~~~l~~~~-----~~~~~~~~~wspDg~~~~~~l~~~~~~~ 265 (771)
.....+.|...+.. .....|+++|+++ + +.+.+. .+ ....+..++|||||+. +++..++.
T Consensus 211 ~~~~~~~yp~~G~~----~~~~~l~v~d~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~wspdg~~----~~~~~~r~ 281 (740)
T 4a5s_A 211 PKTVRVPYPKAGAV----NPTVKFFVVNTDSLSSVTNATSIQIT-APASMLIGDHYLCDVTWATQERI----SLQWLRRI 281 (740)
T ss_dssp CEEEEEECCBTTSC----CCEEEEEEEETTSCCSSSCCCEEEEC-CCHHHHTSCEEEEEEEEEETTEE----EEEEEESS
T ss_pred CcceeecCCCCcCc----CCeeEEEEEECCCCCCCCcceEEEec-CCccCCCCCeEEEEEEEeCCCeE----EEEEeCCC
Confidence 00112223333211 1234799999999 8 666663 21 4446778999999998 88877543
Q ss_pred cceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-------ceec--CCCCcc-----ccceeecCCCCEE
Q 004149 266 ETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-------VVNL--TESISS-----AFFPRFSPDGKFL 331 (771)
Q Consensus 266 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-------~~~l--t~~~~~-----~~~p~~SpDG~~l 331 (771)
. ....|+++|+ ++++ ...+ ..+... ..+|.|||||+.|
T Consensus 282 ~-----------~~~~i~~~d~-----------------~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l 333 (740)
T 4a5s_A 282 Q-----------NYSVMDICDY-----------------DESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSF 333 (740)
T ss_dssp T-----------TEEEEEEEEE-----------------ETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEE
T ss_pred C-----------CEEEEEEEEC-----------------CCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEE
Confidence 2 2237999998 5555 2333 112222 3489999999999
Q ss_pred E-EEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeee-
Q 004149 332 V-FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW- 409 (771)
Q Consensus 332 ~-f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~- 409 (771)
+ |.+.++ | ..+||++|+.++..++++.+..++.. .+++|++.|+|.++.
T Consensus 334 ~~~~s~~~----G----~~~l~~~~~~~~~~~~lT~g~~~v~~---------------------~~~~d~~~i~f~~~~~ 384 (740)
T 4a5s_A 334 YKIISNEE----G----YRHICYFQIDKKDCTFITKGTWEVIG---------------------IEALTSDYLYYISNEY 384 (740)
T ss_dssp EEEEECTT----S----CEEEEEEETTCSSCEESCCSSSCEEE---------------------EEEECSSEEEEEESCG
T ss_pred EEEEEcCC----C----ceEEEEEECCCCceEecccCCEEEEE---------------------EEEEeCCEEEEEEecC
Confidence 8 666553 3 57899999999888888776544322 133568899999876
Q ss_pred ---CCeeEEEEEECCCCcEE-EecCC----CCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCC
Q 004149 410 ---GSSQVIISVNVSSGELL-RITPA----ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSS 481 (771)
Q Consensus 410 ---~~~~~l~~~d~~tg~~~-~l~~~----~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~ 481 (771)
.+..+||++++++++.+ +|+.. ........||++++++++.+++++ |+.+++.+..+++ .+.
T Consensus 385 ~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~-~p~~~l~~~~~~~---~~~------ 454 (740)
T 4a5s_A 385 KGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPG-LPLYTLHSSVNDK---GLR------ 454 (740)
T ss_dssp GGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBS-SCEEEEEETTTTE---EEE------
T ss_pred CCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCC-CCEEEEEECCCCc---EEE------
Confidence 45679999999887765 67743 234566899999999999999988 8889988865432 111
Q ss_pred CCCCCchhhhhccccCcceeeeecccCcccccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CCcch-HHH
Q 004149 482 PISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYS-KSL 559 (771)
Q Consensus 482 ~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~~~~-~~~ 559 (771)
+.+.++.+...+....+...+. .++ ..+|.++.++++.|+++++.+++|+||++||+++... ...|. ...
T Consensus 455 -~l~~n~~~~~~~~~~~~~~~~~------~~~-~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~ 526 (740)
T 4a5s_A 455 -VLEDNSALDKMLQNVQMPSKKL------DFI-ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWA 526 (740)
T ss_dssp -EEECCHHHHHHHTTEECCEEEE------EEE-EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHH
T ss_pred -EeccChhhhhhhhhccCCccEE------EEE-ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHH
Confidence 1122333333333322211111 123 5578999999999998777888999999999887642 12222 233
Q ss_pred HHHH-HCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCC
Q 004149 560 AFLS-SVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP 638 (771)
Q Consensus 560 ~~la-~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p 638 (771)
..|+ ++||+|+++|+||++++|..+.......++...++|+.++++++.+++.+|++||+|+||||||+++++++.++|
T Consensus 527 ~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p 606 (740)
T 4a5s_A 527 TYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGS 606 (740)
T ss_dssp HHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTC
T ss_pred HHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCC
Confidence 4555 599999999999999999988877777888888999999999999888789999999999999999999999999
Q ss_pred CceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCCcCCCCC-ChhhHHHHhhcCccccccCCCC-cEEEEeeCCCC
Q 004149 639 DKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESP-SVEDLTRFHSKSPISHISKVKT-PTIFLLGAQDL 716 (771)
Q Consensus 639 ~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~sp~~~~~~i~~-P~Lii~G~~D~ 716 (771)
++|+++|+.+|+.++..+. ..+.+.+ .+.+ .....+.+...+|...+.++++ |+||+||+.|.
T Consensus 607 ~~~~~~v~~~p~~~~~~~~-------~~~~~~~--------~~~p~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~ 671 (740)
T 4a5s_A 607 GVFKCGIAVAPVSRWEYYD-------SVYTERY--------MGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADD 671 (740)
T ss_dssp SCCSEEEEESCCCCGGGSB-------HHHHHHH--------HCCSSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCS
T ss_pred CceeEEEEcCCccchHHhh-------hHHHHHH--------cCCCCccccHHHHHhCCHHHHHhcCCCCcEEEEEcCCCC
Confidence 9999999999998765331 1111111 1111 1345567888899999999986 99999999999
Q ss_pred ccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 717 RVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 717 ~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
+||+.++.+++++|++++++++++++|+++|++...+...+++..+.+||+++|+
T Consensus 672 ~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 726 (740)
T 4a5s_A 672 NVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 726 (740)
T ss_dssp SSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999986666677889999999999874
No 2
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=100.00 E-value=2.1e-52 Score=485.77 Aligned_cols=587 Identities=18% Similarity=0.239 Sum_probs=419.3
Q ss_pred cceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccc--c--ccceEEEeC--CCCCe-EEEEecCCCCCCe
Q 004149 53 GTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVE--M--TGASAVVPS--PSGSK-LLVVRNPENESPI 125 (771)
Q Consensus 53 g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~--~--~~~~~~~~S--PdG~~-la~~~~~~~~~~~ 125 (771)
|..++|.....+ ...+..||.+ ..++..++++..+.... . .....+.|| |||++ |||.... ..+
T Consensus 33 ~~~~~~~~~~~~---~~~~~~l~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~---~~~ 103 (662)
T 3azo_A 33 GDEVWWVAPRPA---EAGRATLVRR---RADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFG---DQR 103 (662)
T ss_dssp TTEEEEEEEETT---TTTEEEEEEE---CTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTT---TCC
T ss_pred CCeEEEEecCcc---cCCcEEEEEE---CCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECC---CCe
Confidence 457888876433 1245677775 23446677765542210 0 001145565 99999 9998754 356
Q ss_pred EEEEecC----CcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCc
Q 004149 126 QFELWSQ----SQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQ 201 (771)
Q Consensus 126 ~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (771)
+|.+..+ +..++++......++ .....++|||||++|+|.+.+.....
T Consensus 104 l~~~~~~~~g~~~~~~l~~~~~~~~~-----~~~~~~~~spDg~~l~~~~~~~~~~~----------------------- 155 (662)
T 3azo_A 104 LYAFEPDAPGGAVPRPLTPVSAVGGG-----LRWADPVLLPERGEVWCMAEEFTGEG----------------------- 155 (662)
T ss_dssp EEEECTTSTTCCCCEECSCCCCSTTC-----EEEEEEEEETTTTEEEEEEEEECSSS-----------------------
T ss_pred EEEEcCCCCCCCCCEeccCCccCCCC-----ccccCcEECCCCCEEEEEEecccCCC-----------------------
Confidence 8888843 666666553211110 12358999999999999976531100
Q ss_pred ccccCCcCcccCCccCceEEEEEccC------CceeeccCC-CCCCccceEEEecCCCCCccEEEEEeecCcceeeeeee
Q 004149 202 GDWEEDWGETYAGKRQPSLFVININS------GEVQAVKGI-PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKY 274 (771)
Q Consensus 202 ~~~~~d~g~~~~~~~~~~l~v~d~~~------~~~~~l~~~-~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~ 274 (771)
. .....+|++||+++ ++.+.+ + ........++|||||++ |+|+++......
T Consensus 156 --------~---~~~~~~i~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~SpDG~~----la~~~~~~~~~~----- 213 (662)
T 3azo_A 156 --------P---SDVRRFLAAVPLDGSAAADRSAVREL--SDDAHRFVTGPRLSPDGRQ----AVWLAWDHPRMP----- 213 (662)
T ss_dssp --------T---TCEEEEEEEEETTSTTTTCGGGSEES--SCSCSSEECCCEECTTSSE----EEEEEECTTCCT-----
T ss_pred --------C---CCceeEEEEEECCCCccccCCceeEE--EecCCCcccCceECCCCCE----EEEEECCCCCCC-----
Confidence 0 11347899999999 888888 5 55556778999999999 999986442110
Q ss_pred eccCCceeEEEecccccchhhhhhhhcCCCC-CC---cceecCCC-CccccceeecCCCCEEEEEecCCCCCCCCccccc
Q 004149 275 CYNRPCALYAVRVSLYKSEASELELKESSSE-DL---PVVNLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATD 349 (771)
Q Consensus 275 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~-~~---~~~~lt~~-~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~ 349 (771)
-...+||++|+ + ++ +.++|+.. ...+..|.|||||+ |+|.+..+ | ..
T Consensus 214 --~~~~~i~~~d~-----------------~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~----~----~~ 265 (662)
T 3azo_A 214 --WEGTELKTARV-----------------TEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRT----G----WW 265 (662)
T ss_dssp --TTCEEEEEEEE-----------------CTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTT----S----SC
T ss_pred --CCCcEEEEEEE-----------------CCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCC----C----Ce
Confidence 02248999998 5 45 66777654 46688999999999 88888764 2 45
Q ss_pred cceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 004149 350 SLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 429 (771)
Q Consensus 350 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 429 (771)
+||++|+.+++.++++..... ...| .|......++|++|++ ++++... +..+||.+|++++++++|+
T Consensus 266 ~l~~~~~~~~~~~~l~~~~~~----------~~~p-~w~~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 266 NLHRVDPATGAATQLCRREEE----------FAGP-LWTPGMRWFAPLANGL-IAVVHGK-GAAVLGILDPESGELVDAA 332 (662)
T ss_dssp EEEEECTTTCCEEESSCCSSB----------SSCC-CCSTTCCSEEECTTSC-EEEEEBS-SSCEEEEEETTTTEEEECC
T ss_pred EEEEEECCCCceeeccccccc----------ccCc-cccccCceEeEeCCCE-EEEEEEc-CccEEEEEECCCCcEEEec
Confidence 799999877765554432211 0001 1222234567778887 6666666 8889999999999998887
Q ss_pred CCCCCceeeEE-eecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCCCCCCCchhhhhccccCcce-eeeeccc
Q 004149 430 PAESNFSWSLL-TLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFS-IMKIPVK 507 (771)
Q Consensus 430 ~~~~~~~~~~~-s~d~~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~i~~~ 507 (771)
..... ...+ +++++.+++++++.+.|..+|+.++.+++ . ..++....+ . +....+. ...
T Consensus 333 ~~~~~--~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~--~-~~l~~~~~~--~--------~~~~~~~~~~~---- 393 (662)
T 3azo_A 333 GPWTE--WAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR--A-RTIGARHTD--P--------VDPAYYPEPQI---- 393 (662)
T ss_dssp SSCCE--EEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC--E-EEEESCCCC--S--------SCGGGSCCCEE----
T ss_pred CCCCe--EEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc--e-EEeecCCcc--c--------CCccccCcceE----
Confidence 66442 2344 88999999999999999999999876543 1 111111000 0 1111110 111
Q ss_pred CcccccccCCCceEEEEEEecCCCC----CCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChh
Q 004149 508 GVSANLTKGAQKPFEAIFVSSSHKK----DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEE 583 (771)
Q Consensus 508 ~~~~~~~~~~g~~l~~~~~~P~~~~----~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~ 583 (771)
..+...+|..++++++.|++.. ..++.|+||++||+++......|...++.|+++||.|+++|+||++++|.+
T Consensus 394 ---~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~~G~~ 470 (662)
T 3azo_A 394 ---RTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGSTGYGRA 470 (662)
T ss_dssp ---EEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCSSSCHH
T ss_pred ---EEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCCCccHH
Confidence 1334457889999999998653 456789999999998776556788889999999999999999999999999
Q ss_pred hhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhc-CCCC
Q 004149 584 ALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-TTDI 662 (771)
Q Consensus 584 ~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~-~~~~ 662 (771)
+.......++..+++|+.++++++++++.++++|++|+||||||++++.++.+ |++|+++|+.+|+.++..+.. ....
T Consensus 471 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~ 549 (662)
T 3azo_A 471 YRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGWADGGTHD 549 (662)
T ss_dssp HHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHHHTTCSCG
T ss_pred HHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHHhcccccc
Confidence 98776667777789999999999999988899999999999999999998886 999999999999998776543 1111
Q ss_pred CcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEe
Q 004149 663 PDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF 742 (771)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~ 742 (771)
....+... +.... .+..+.+...+|+..+.++++|+|++||++|.++|++++++++++|++.|++++++++
T Consensus 550 ~~~~~~~~--------~~~~~-~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~ 620 (662)
T 3azo_A 550 FESRYLDF--------LIGSF-EEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVPHAYLSF 620 (662)
T ss_dssp GGTTHHHH--------HTCCT-TTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCCEEEEEE
T ss_pred hhhHhHHH--------HhCCC-ccchhHHHhhChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCCEEEEEE
Confidence 00011111 11111 2455677788999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 743 PNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 743 ~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
++++|++...+...++++.+.+||.++|+
T Consensus 621 ~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 649 (662)
T 3azo_A 621 EGEGHGFRRKETMVRALEAELSLYAQVFG 649 (662)
T ss_dssp TTCCSSCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHhC
Confidence 99999987666677889999999999875
No 3
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=100.00 E-value=5.6e-53 Score=482.50 Aligned_cols=560 Identities=16% Similarity=0.215 Sum_probs=409.0
Q ss_pred HHHHHHHHHHhhcCccccceEEEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceE
Q 004149 24 YASLSKLLQDFTNISSIDKAWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASA 103 (771)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~ 103 (771)
+.+..+.++++...|-. ...+ |+||++|+|..... ....||. + .+++.+++|... ...+..
T Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~----~~DG~~la~~s~~~------g~~~lw~--~--~~g~~~~lt~~~----~~~~~~ 69 (582)
T 3o4h_A 9 FSRIVRDVERLIAVEKY-SLQG----VVDGDKLLVVGFSE------GSVNAYL--Y--DGGETVKLNREP----INSVLD 69 (582)
T ss_dssp HHHHHHHHHHHHHSCEE-EEEE----EETTTEEEEEEEET------TEEEEEE--E--ETTEEEECCSSC----CSEECE
T ss_pred HHHHHHHHHHHhccchh-eeec----CCCCCeEEEEEccC------CceeEEE--E--cCCCcEeeeccc----cccccc
Confidence 55566666777666632 2222 35999999986532 3456776 4 344667776553 135788
Q ss_pred EEeCCCCCeEEEEecCC--CCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCC
Q 004149 104 VVPSPSGSKLLVVRNPE--NESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 179 (771)
Q Consensus 104 ~~~SPdG~~la~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 179 (771)
|+|||| +++|.+... .....+|.+.. .+...+++... .. ...+|||||+.++|++...
T Consensus 70 ~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~~~-~~----------~~~~~s~dg~~~~~~s~~~----- 131 (582)
T 3o4h_A 70 PHYGVG--RVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVK-PM----------RILSGVDTGEAVVFTGATE----- 131 (582)
T ss_dssp ECTTCS--EEEEEEECSTTSCCEEEEEEETTSTTCCEECTTSC-SB----------EEEEEEECSSCEEEEEECS-----
T ss_pred ccCCCC--eEEEEeccCCCCcceEEEEEeccCCCccccccCCC-Cc----------eeeeeCCCCCeEEEEecCC-----
Confidence 999999 677877652 23346666664 55544332221 22 3679999999999986432
Q ss_pred CccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEE
Q 004149 180 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 259 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~ 259 (771)
..+.+||+++++.+.+. .... ..++|||||+. |+
T Consensus 132 --------------------------------------~~~~l~d~~~g~~~~l~--~~~~--~~~~~spDG~~----la 165 (582)
T 3o4h_A 132 --------------------------------------DRVALYALDGGGLRELA--RLPG--FGFVSDIRGDL----IA 165 (582)
T ss_dssp --------------------------------------SCEEEEEEETTEEEEEE--EESS--CEEEEEEETTE----EE
T ss_pred --------------------------------------CCceEEEccCCcEEEee--cCCC--ceEEECCCCCE----EE
Confidence 23347899999988883 3222 78999999999 99
Q ss_pred EEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCC
Q 004149 260 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSS 339 (771)
Q Consensus 260 ~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~ 339 (771)
+.+..... ...||++|+ ++++.++|+.+.+.+.+|+|||||++|+ .+...
T Consensus 166 ~~~~~~~~-----------~~~i~~~d~-----------------~~g~~~~l~~~~~~~~~~~~SpDG~~l~-~~~~~- 215 (582)
T 3o4h_A 166 GLGFFGGG-----------RVSLFTSNL-----------------SSGGLRVFDSGEGSFSSASISPGMKVTA-GLETA- 215 (582)
T ss_dssp EEEEEETT-----------EEEEEEEET-----------------TTCCCEEECCSSCEEEEEEECTTSCEEE-EEECS-
T ss_pred EEEEcCCC-----------CeEEEEEcC-----------------CCCCceEeecCCCccccceECCCCCEEE-EccCC-
Confidence 98753221 136999998 8888899998888889999999999998 33332
Q ss_pred CCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCc--------cccCCCEEEEEeeeCC
Q 004149 340 VDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNP--------WLSDGCTMLLSSIWGS 411 (771)
Q Consensus 340 ~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~--------~s~dg~~l~~~~~~~~ 411 (771)
| ..+|+++|+++++.+ ++..... .+..+. ||||| .++++...++
T Consensus 216 ---~----~~~i~~~d~~~~~~~-~~~~~~~-------------------~~~~~~~~~~~~~~~spdg-~~~~~~~~~g 267 (582)
T 3o4h_A 216 ---R----EARLVTVDPRDGSVE-DLELPSK-------------------DFSSYRPTAITWLGYLPDG-RLAVVARREG 267 (582)
T ss_dssp ---S----CEEEEEECTTTCCEE-ECCCSCS-------------------HHHHHCCSEEEEEEECTTS-CEEEEEEETT
T ss_pred ---C----eeEEEEEcCCCCcEE-EccCCCc-------------------ChhhhhhccccceeEcCCC-cEEEEEEcCC
Confidence 1 357999999887754 2221100 112334 99999 6888888888
Q ss_pred eeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCCCCCCCchhhh
Q 004149 412 SQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVK 491 (771)
Q Consensus 412 ~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (771)
...||.+ |+..+.. .+.+....++ ++ .++++.++..+|+++|+.+..+ + + ..+ .+++...
T Consensus 268 ~~~l~~~----g~~~~~~--~~~v~~~~~s-dg-~~l~~~s~~~~p~~l~~~d~~~-~----~--~~l-----~~~~~~~ 327 (582)
T 3o4h_A 268 RSAVFID----GERVEAP--QGNHGRVVLW-RG-KLVTSHTSLSTPPRIVSLPSGE-P----L--LEG-----GLPEDLR 327 (582)
T ss_dssp EEEEEET----TEEECCC--SSEEEEEEEE-TT-EEEEEEEETTEEEEEEEETTCC-E----E--ECC-----CCCHHHH
T ss_pred cEEEEEE----CCeeccC--CCceEEEEec-CC-EEEEEEcCCCCCCeEEEEcCCC-c----e--EEE-----ecCCccc
Confidence 8888876 5555422 2334445677 55 5667888899999999987543 1 1 111 1111000
Q ss_pred hccccCcceeeeecccCcccccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEE
Q 004149 492 SLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLI 571 (771)
Q Consensus 492 ~~l~~~~~~~~~i~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~ 571 (771)
.... .... .++...+|.+++++++.|++.. .+.|+||++||+++......|...++.|+++||.|++
T Consensus 328 --~~~~--~~~~-------~~~~~~~g~~i~~~~~~p~~~~--~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~ 394 (582)
T 3o4h_A 328 --RSIA--GSRL-------VWVESFDGSRVPTYVLESGRAP--TPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVM 394 (582)
T ss_dssp --HTEE--EEEE-------EEEECTTSCEEEEEEEEETTSC--SSEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEE
T ss_pred --cccC--cceE-------EEEECCCCCEEEEEEEcCCCCC--CCCcEEEEECCCcccccccccCHHHHHHHhCCCEEEE
Confidence 0010 1111 2445567889999999998643 3789999999988776666788899999999999999
Q ss_pred ECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCcc
Q 004149 572 VNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 572 ~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 651 (771)
+|+||++++|.++.......++...++|+.++++++.+++.++ +++|+|||+||++++.++.++|++++++|+.+|+.
T Consensus 395 ~d~rG~~~~G~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~ 472 (582)
T 3o4h_A 395 PNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVV 472 (582)
T ss_dssp ECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCC
T ss_pred eccCCCCCCchhHHhhhhhhcccccHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCcc
Confidence 9999999999998877777777788999999999999987666 99999999999999999999999999999999999
Q ss_pred chhhhhcCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHH
Q 004149 652 NLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALR 731 (771)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~ 731 (771)
++..+....+.....+.+.+ .+ ...+.+...+|+..+.++++|+|++||++|.++|++++++++++|+
T Consensus 473 ~~~~~~~~~~~~~~~~~~~~--------~~----~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~ 540 (582)
T 3o4h_A 473 DWEEMYELSDAAFRNFIEQL--------TG----GSREIMRSRSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELL 540 (582)
T ss_dssp CHHHHHHTCCHHHHHHHHHH--------TT----TCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHH
T ss_pred CHHHHhhcccchhHHHHHHH--------cC----cCHHHHHhcCHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHHHH
Confidence 88766544332210011111 11 3456678889999999999999999999999999999999999999
Q ss_pred hCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 732 EKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 732 ~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
+.|++++++++|+++|.+..++...++++.+.+||+++|+
T Consensus 541 ~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~l~ 580 (582)
T 3o4h_A 541 ARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQRE 580 (582)
T ss_dssp HTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999988666777899999999999985
No 4
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=3.7e-53 Score=497.38 Aligned_cols=616 Identities=16% Similarity=0.171 Sum_probs=414.8
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCe
Q 004149 46 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 125 (771)
Q Consensus 46 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 125 (771)
.+..||||++|+|........+......++++++.++ +.++++... .....+..++|||||++|||+++. +
T Consensus 65 ~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~l~~~~--~~~~~~~~~~~SPdG~~la~~~~~-----~ 135 (723)
T 1xfd_A 65 RYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG--DPQSLDPPE--VSNAKLQYAGWGPKGQQLIFIFEN-----N 135 (723)
T ss_dssp EEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC--CCEECCCTT--CCSCCCSBCCBCSSTTCEEEEETT-----E
T ss_pred eEEECCCCCEEEEEecCccceeecceeeEEEEECCCC--ceEeccCCc--cccccccccEECCCCCEEEEEECC-----e
Confidence 4556889999999876443333334578888887443 334454322 111226679999999999999863 4
Q ss_pred EEEEe-cCCcceEEEecCCc-c-----cccccCCC---cccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccC
Q 004149 126 QFELW-SQSQLEKEFHVPQT-V-----HGSVYADG---WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDC 195 (771)
Q Consensus 126 ~~~~~-~~~~~~~~~~~~~~-~-----~g~~~~~~---~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (771)
++.++ .+++.++++..... . .+.+|.++ ....++|||||++|+|.+.+.... ..+........ .
T Consensus 136 i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~-~~~~~~~~~~~-----~ 209 (723)
T 1xfd_A 136 IYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRV-PIMELPTYTGS-----I 209 (723)
T ss_dssp EEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTS-CEEEECCCSSS-----S
T ss_pred EEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCcc-ceEEeeccCCc-----C
Confidence 77777 56677777654211 1 11111111 124799999999999998654321 11111100000 0
Q ss_pred CCCCCcccccCCcCcccCCccCceEEEEEccCCce-eeccCCCC------CCccceEEEecCCCCCccEEEEEeecCcce
Q 004149 196 NSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV-QAVKGIPK------SLSVGQVVWAPLNEGLHQYLVFVGWSSETR 268 (771)
Q Consensus 196 ~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~-~~l~~~~~------~~~~~~~~wspDg~~~~~~l~~~~~~~~~~ 268 (771)
......+.|.+++ .. .....|++||+.+++. +.+. .. ...+..++|||||+. |++.+.+..
T Consensus 210 ~~~~~~~~~~~~G-~~---~~~~~l~~~d~~~~~~~~~l~--~~~~~~~~~~~~~~~~~SpDg~~----l~~~~~~~~-- 277 (723)
T 1xfd_A 210 YPTVKPYHYPKAG-SE---NPSISLHVIGLNGPTHDLEMM--PPDDPRMREYYITMVKWATSTKV----AVTWLNRAQ-- 277 (723)
T ss_dssp SCCCEEEECCBTT-SC---CCEEEEEEEESSSSCCCEECC--CCCCGGGSSEEEEEEEESSSSEE----EEEEEETTS--
T ss_pred CCcceeccCCCCC-CC---CCeeEEEEEECCCCceeEEee--CCccCCCccceeEEEEEeCCCeE----EEEEEcCCC--
Confidence 1112233444442 21 2345899999999884 6662 22 345678999999997 877654321
Q ss_pred eeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCC--Cccc----cceeecCCCCEEEEE-ecCCCCC
Q 004149 269 KLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES--ISSA----FFPRFSPDGKFLVFL-SAKSSVD 341 (771)
Q Consensus 269 ~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~--~~~~----~~p~~SpDG~~l~f~-~~~~~~~ 341 (771)
....|+++|+ .+++.+.+... ...+ ..|+|||||++|+|. +..+
T Consensus 278 ---------~~~~i~~~d~-----------------~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~--- 328 (723)
T 1xfd_A 278 ---------NVSILTLCDA-----------------TTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQ--- 328 (723)
T ss_dssp ---------CEEEEEEEET-----------------TTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECC---
T ss_pred ---------CeEEEEEEeC-----------------CCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEeccc---
Confidence 2247999998 77776655322 1222 489999999999998 4433
Q ss_pred CCCccccccceeee-cCCCC---CCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeC--CeeEE
Q 004149 342 SGAHSATDSLHRID-WPTNG---NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG--SSQVI 415 (771)
Q Consensus 342 ~g~~~~~~~l~~~d-~~~~~---~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~--~~~~l 415 (771)
|.+....+||++| ..++. .+.++.+...+ ...++|||||+.|+|.+..+ +..+|
T Consensus 329 -~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~-------------------~~~~~~spdg~~l~~~~~~~~~~~~~l 388 (723)
T 1xfd_A 329 -GGRGKFYHITVSSSQPNSSNDNIQSITSGDWDV-------------------TKILAYDEKGNKIYFLSTEDLPRRRQL 388 (723)
T ss_dssp -SSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCE-------------------EEEEEEETTTTEEEEEESSSCTTCCEE
T ss_pred -CCCcceeEEEEEeccCCCCccceeEeecCCeEE-------------------EeeeEEcCCCCEEEEEEcCCCCcceEE
Confidence 3223356899999 45555 44554322111 11257999999999888765 67889
Q ss_pred EEEECCCC-cEEEecCC---CCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCCCCCCCchhhh
Q 004149 416 ISVNVSSG-ELLRITPA---ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVK 491 (771)
Q Consensus 416 ~~~d~~tg-~~~~l~~~---~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (771)
|.++..++ +.++|+.. ...+....||+||+.+++.+++++.|..+++ +...+ .++.+ + +.++.+.
T Consensus 389 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~-~~~~~---~~~~~--~-----~~~~~~~ 457 (723)
T 1xfd_A 389 YSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVH-NTTDK---KKMFD--L-----ETNEHVK 457 (723)
T ss_dssp EEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEE-ETTTC---CEEEE--E-----ECCHHHH
T ss_pred EEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEE-ECCCC---CEEEE--e-----ccChhhh
Confidence 99998765 45666642 3345567899999999999999999987665 43222 22211 1 1122222
Q ss_pred hccccCcceeeeecccCcccccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CCcc--hHHHHHHHHCCcE
Q 004149 492 SLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSY--SKSLAFLSSVGYS 568 (771)
Q Consensus 492 ~~l~~~~~~~~~i~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~~~--~~~~~~la~~G~~ 568 (771)
..+....+. +.+. +.+...+| ++.++++.|+++...+++|+||++||+++... ...| ......|+++||+
T Consensus 458 ~~~~~~~~~----~~~~--~~~~~~~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~ 530 (723)
T 1xfd_A 458 KAINDRQMP----KVEY--RDIEIDDY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAV 530 (723)
T ss_dssp HHHHTSCCC----BCCB--CCEEETTE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCE
T ss_pred hhhhhccCC----CceE--EEEEcCCc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEE
Confidence 222222221 1111 23445567 99999999997666788999999999887632 2223 3556677889999
Q ss_pred EEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhC----CCceeEE
Q 004149 569 LLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA----PDKFVAA 644 (771)
Q Consensus 569 V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~----p~~~~a~ 644 (771)
|+++|+||++++|..+.......++...++|+.++++++.+++.+|.+||+|+||||||++++.++.++ |++++++
T Consensus 531 vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~ 610 (723)
T 1xfd_A 531 VVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCG 610 (723)
T ss_dssp EECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEE
T ss_pred EEEECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEE
Confidence 999999999988887766556666667799999999999988778899999999999999999999999 9999999
Q ss_pred EecCCccchhhhhcCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCC-CcEEEEeeCCCCccCcHHH
Q 004149 645 AARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK-TPTIFLLGAQDLRVPVSNG 723 (771)
Q Consensus 645 v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~-~P~Lii~G~~D~~vp~~~~ 723 (771)
|+.+|+.++..+ ...+.+.+.. .+ ......+...++...+.+++ +|+||+||++|.++|++++
T Consensus 611 v~~~~~~~~~~~-------~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~ 674 (723)
T 1xfd_A 611 SALSPITDFKLY-------ASAFSERYLG--------LH-GLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHT 674 (723)
T ss_dssp EEESCCCCTTSS-------BHHHHHHHHC--------CC-SSCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHH
T ss_pred EEccCCcchHHh-------hhhccHhhcC--------Cc-cCChhHHHhcChhhHHhhcCCCCEEEEEeCCCCCcCHhHH
Confidence 999998765422 1111111100 00 01112344556777888999 7999999999999999999
Q ss_pred HHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 724 LQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 724 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
++++++|++.+.+++++++|+++|++...+...++++.+.+||+++|+
T Consensus 675 ~~~~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 722 (723)
T 1xfd_A 675 AELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECFR 722 (723)
T ss_dssp HHHHHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999986566667889999999999875
No 5
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=8.4e-51 Score=474.82 Aligned_cols=592 Identities=13% Similarity=0.133 Sum_probs=415.4
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecC-Cccc-cccceEEEeCCCCCeEEEEecCCCC-CCeE
Q 004149 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAP-FPVE-MTGASAVVPSPSGSKLLVVRNPENE-SPIQ 126 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~-~~~~-~~~~~~~~~SPdG~~la~~~~~~~~-~~~~ 126 (771)
++||++++|.....+ .....+|+.+. .+++.+.|.... +... ......++|||||++|||.....+. ..++
T Consensus 80 ~~dG~~~~~~~~~~~----~~~~~l~~~~~--~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i 153 (710)
T 2xdw_A 80 FKKGKRYFYFYNTGL----QNQRVLYVQDS--LEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTI 153 (710)
T ss_dssp EEETTEEEEEEECSS----CSSCEEEEESS--TTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEE
T ss_pred EEECCEEEEEEEcCC----ceEEEEEEEcC--CCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEE
Confidence 369999999986432 34457888654 333444343221 1110 0136789999999999999886532 2377
Q ss_pred EEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCccccc
Q 004149 127 FELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 205 (771)
Q Consensus 127 ~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (771)
++++ .+++..+.+...... .+++|||||+.|+|.+........ .
T Consensus 154 ~v~d~~tg~~~~~~~~~~~~----------~~~~wspDg~~l~~~~~~~~~~~~--------~----------------- 198 (710)
T 2xdw_A 154 KFMKVDGAKELPDVLERVKF----------SCMAWTHDGKGMFYNAYPQQDGKS--------D----------------- 198 (710)
T ss_dssp EEEETTTTEEEEEEEEEECS----------CCEEECTTSSEEEEEECCCCSSCC--------S-----------------
T ss_pred EEEECCCCCCCcccccCccc----------ceEEEEeCCCEEEEEEECCccccc--------c-----------------
Confidence 7777 566655543322122 589999999999999865431100 0
Q ss_pred CCcCcccCCccCceEEEEEccCCcee--ec-cCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCcee
Q 004149 206 EDWGETYAGKRQPSLFVININSGEVQ--AV-KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCAL 282 (771)
Q Consensus 206 ~d~g~~~~~~~~~~l~v~d~~~~~~~--~l-~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l 282 (771)
+..-.......||++++.+++.. .+ ...........+.|||||+. |++.+..... ...+|
T Consensus 199 ---~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~----l~~~~~~~~~----------~~~~l 261 (710)
T 2xdw_A 199 ---GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRY----VLLSIREGCD----------PVNRL 261 (710)
T ss_dssp ---SSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCE----EEEEEECSSS----------SCCEE
T ss_pred ---ccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCE----EEEEEEccCC----------CccEE
Confidence 00000113468999999887632 22 11111223568899999999 9998743211 14589
Q ss_pred EEEecccccchhhhhhhhcCCCCC------C--cceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceee
Q 004149 283 YAVRVSLYKSEASELELKESSSED------L--PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 354 (771)
Q Consensus 283 ~~~d~~~~~~~~~~~~~~~~~~~~------~--~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~ 354 (771)
|++|+ .+ + ..++|+....... ..|+|||++|+|.++.. ....+|+++
T Consensus 262 ~~~d~-----------------~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~-------~~~~~l~~~ 316 (710)
T 2xdw_A 262 WYCDL-----------------QQESNGITGILKWVKLIDNFEGEY-DYVTNEGTVFTFKTNRH-------SPNYRLINI 316 (710)
T ss_dssp EEEEG-----------------GGSSSSSCSSCCCEEEECSSSSCE-EEEEEETTEEEEEECTT-------CTTCEEEEE
T ss_pred EEEEC-----------------cccccccCCccceEEeeCCCCcEE-EEEeccCCEEEEEECCC-------CCCCEEEEE
Confidence 99998 43 3 4677776554443 46999999999998764 235689999
Q ss_pred ecCCCCC---CCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc-EEEecC
Q 004149 355 DWPTNGN---FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE-LLRITP 430 (771)
Q Consensus 355 d~~~~~~---~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~-~~~l~~ 430 (771)
|+.+++. +.+..... . ..+..+.|+++ ..|+++...++..+|+.+++.+|+ ++.|..
T Consensus 317 d~~~~~~~~~~~l~~~~~-----------~-------~~~~~~~~~~~-~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~ 377 (710)
T 2xdw_A 317 DFTDPEESKWKVLVPEHE-----------K-------DVLEWVACVRS-NFLVLCYLHDVKNTLQLHDLATGALLKIFPL 377 (710)
T ss_dssp ETTSCCGGGCEEEECCCS-----------S-------CEEEEEEEETT-TEEEEEEEETTEEEEEEEETTTCCEEEEECC
T ss_pred eCCCCCcccceeccCCCC-----------C-------CeEEEEEEEcC-CEEEEEEEECCEEEEEEEECCCCCEEEecCC
Confidence 9887642 11211110 0 01234678854 468888888888999999996665 567766
Q ss_pred CCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCCCCCCCchhhhhccccCcceeeeecccCcc
Q 004149 431 AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVS 510 (771)
Q Consensus 431 ~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~ 510 (771)
..+.+....++++++.+++..++.++|.++|++++.+++... ..++.. ++..++ ...+....+
T Consensus 378 ~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~-~~l~~~--~~~~~~--------~~~~~~~~~------ 440 (710)
T 2xdw_A 378 EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEP-RVFREV--TVKGID--------ASDYQTVQI------ 440 (710)
T ss_dssp CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCC-EEEEEC--CCTTCC--------GGGEEEEEE------
T ss_pred CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccce-EEeeec--ccCCcC--------ccccEEEEE------
Confidence 544344456678999999999999999999999986543101 111111 111121 112222222
Q ss_pred cccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHH-CCcEEEEECCCCCCCCChhhhhcCC
Q 004149 511 ANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLP 589 (771)
Q Consensus 511 ~~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~-~G~~V~~~d~rG~~~~g~~~~~~~~ 589 (771)
.+...+|.+++++++.|++....++.|+||++||+++......|......|++ +||+|+++|+||++++|..|.....
T Consensus 441 -~~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~~~ 519 (710)
T 2xdw_A 441 -FYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGI 519 (710)
T ss_dssp -EEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTS
T ss_pred -EEEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHHhhh
Confidence 44566789999999999976566789999999999877666667776667777 9999999999999999998877655
Q ss_pred CCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhh
Q 004149 590 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 669 (771)
Q Consensus 590 ~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~ 669 (771)
.......++|+.+++++|++++.++++||+|+|+|+||++++.++.++|++|+++|+.+|+.++..+........| ..
T Consensus 520 ~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~--~~ 597 (710)
T 2xdw_A 520 LANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAW--TT 597 (710)
T ss_dssp GGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGG--HH
T ss_pred hhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccCCChhH--HH
Confidence 5556667899999999999998889999999999999999999999999999999999999887655432211111 12
Q ss_pred hccCCCCCcCCCCCChhhHHHHhhcCcccccc-----CCCC-cEEEEeeCCCCccCcHHHHHHHHHHHhC-------CCC
Q 004149 670 SYGSKGKDSFTESPSVEDLTRFHSKSPISHIS-----KVKT-PTIFLLGAQDLRVPVSNGLQYARALREK-------GVE 736 (771)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~-----~i~~-P~Lii~G~~D~~vp~~~~~~~~~~l~~~-------g~~ 736 (771)
.++. ....+....+...+|+.++. ++++ |+||+||++|.+||+.++.+++++|+.. +.+
T Consensus 598 ~~g~--------~~~~~~~~~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 669 (710)
T 2xdw_A 598 DYGC--------SDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNP 669 (710)
T ss_dssp HHCC--------TTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSC
T ss_pred hCCC--------CCCHHHHHHHHHhCcHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcC
Confidence 2221 12345566777889999998 7886 9999999999999999999999999988 889
Q ss_pred EEEEEeCCCCccCCCCC-ChHHHHHHHHHHHHHHhC
Q 004149 737 TKVIVFPNDVHGIERPQ-SDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 737 ~~~~~~~~~~H~~~~~~-~~~~~~~~i~~wl~~~l~ 771 (771)
+++++++++||++..+. ...+.+..+.+||.++|+
T Consensus 670 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 705 (710)
T 2xdw_A 670 LLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLN 705 (710)
T ss_dssp EEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999987643 346788899999999874
No 6
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=1.5e-50 Score=471.27 Aligned_cols=586 Identities=13% Similarity=0.135 Sum_probs=414.7
Q ss_pred cCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecC-Ccc-ccccceEEEeCCCCCeEEEEecCCC-CCC
Q 004149 48 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAP-FPV-EMTGASAVVPSPSGSKLLVVRNPEN-ESP 124 (771)
Q Consensus 48 ~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~-~~~-~~~~~~~~~~SPdG~~la~~~~~~~-~~~ 124 (771)
..++||++++|.+.... .....||+.+. .+++.++|+... +.. .......++|||||++|||.....+ +..
T Consensus 74 ~p~~dG~~~~~~~~~~~----~~~~~l~~~~~--~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~ 147 (695)
T 2bkl_A 74 TPSRRNGRFFYVRTHKD----KEKAILYWRQG--ESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEA 147 (695)
T ss_dssp CCEEETTEEEEEEECTT----CSSCEEEEEES--TTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCC
T ss_pred CCEEECCEEEEEEEcCC----CeEEEEEEEcC--CCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceE
Confidence 33479999999886532 33567888664 344566666432 110 0124678999999999999988653 346
Q ss_pred eEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCccc
Q 004149 125 IQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGD 203 (771)
Q Consensus 125 ~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (771)
.+++++ .+++..+...+... .+..++|||||+.|+|.+.+......
T Consensus 148 ~i~v~dl~tg~~~~~~~~~~~---------~~~~~~wspDg~~l~~~~~d~~~~~~------------------------ 194 (695)
T 2bkl_A 148 VLHVIDVDSGEWSKVDVIEGG---------KYATPKWTPDSKGFYYEWLPTDPSIK------------------------ 194 (695)
T ss_dssp EEEEEETTTCCBCSSCCBSCC---------TTCCCEECTTSSEEEEEECCCCTTSC------------------------
T ss_pred EEEEEECCCCCCcCCcccCcc---------cccceEEecCCCEEEEEEecCCCCCc------------------------
Confidence 777777 55543211111111 12589999999999999865421100
Q ss_pred ccCCcCcccCCccCceEEEEEccCCce--eeccCCC-CCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCc
Q 004149 204 WEEDWGETYAGKRQPSLFVININSGEV--QAVKGIP-KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 280 (771)
Q Consensus 204 ~~~d~g~~~~~~~~~~l~v~d~~~~~~--~~l~~~~-~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~ 280 (771)
.-......+||++++.++.. +.+...+ .......+.|||||+. |++.++... ...
T Consensus 195 -------~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~----l~~~~~~~~-----------~~~ 252 (695)
T 2bkl_A 195 -------VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKY----LFVYILRGW-----------SEN 252 (695)
T ss_dssp -------GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCC----EEEEEEETT-----------TEE
T ss_pred -------cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCE----EEEEEeCCC-----------Cce
Confidence 00011346899999998873 3331112 2235668899999999 999875331 224
Q ss_pred eeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCC
Q 004149 281 ALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 281 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
+||+++. .+++.++|+........+.| |||+ |++.++.. .....|+++|+.+++
T Consensus 253 ~l~~~~~-----------------~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~-------~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 253 DVYWKRP-----------------GEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEG-------APRQRVFEVDPAKPA 306 (695)
T ss_dssp EEEEECT-----------------TCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTT-------CTTCEEEEEBTTBCS
T ss_pred EEEEEcC-----------------CCCceEEeecCCCceEEEEe-cCCc-EEEEECCC-------CCCCEEEEEeCCCCC
Confidence 8999986 66778888877666777877 7888 88887653 235689999987765
Q ss_pred C---CCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC-CCCce
Q 004149 361 N---FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA-ESNFS 436 (771)
Q Consensus 361 ~---~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~-~~~~~ 436 (771)
. +.+.... .. ..+..++|+ +..|+++...++..+||.++++++..+.+... .+.+.
T Consensus 307 ~~~~~~l~~~~-----------~~-------~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~ 366 (695)
T 2bkl_A 307 RASWKEIVPED-----------SS-------ASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAAS 366 (695)
T ss_dssp GGGCEEEECCC-----------SS-------CEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEEC
T ss_pred ccCCeEEecCC-----------CC-------CeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEE
Confidence 3 1111110 00 012345666 44688888888999999999876667777644 33334
Q ss_pred eeEEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCCCCCCCchhhhhccccCcceeeeecccCcccccccC
Q 004149 437 WSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKG 516 (771)
Q Consensus 437 ~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~ 516 (771)
...++++++.+++..++.++|.++|+.++.+++ .+ .++... . .++ ...+....+ .+...
T Consensus 367 ~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~--~~-~l~~~~--~-~~~--------~~~~~~~~~-------~~~~~ 425 (695)
T 2bkl_A 367 NLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK--SE-LWAKVD--V-PMN--------PEQYQVEQV-------FYASK 425 (695)
T ss_dssp CCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC--EE-EEEECC--C-SSC--------GGGEEEEEE-------EEECT
T ss_pred EeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc--EE-EEecCC--C-CCC--------HHHCeEEEE-------EEECC
Confidence 456778999999999999999999999986553 11 111111 0 111 111222222 44566
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|.++.++++.|++....++.|+||++|||++......|......|+++||+|+++|+||++++|..|............
T Consensus 426 dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~ 505 (695)
T 2bkl_A 426 DGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYGKAWHDAGRLDKKQNV 505 (695)
T ss_dssp TSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTCHHHHHTTSGGGTHHH
T ss_pred CCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcCHHHHHhhHhhcCCCc
Confidence 78999999999997656678999999999887765556766677788999999999999999999998776555555667
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCC
Q 004149 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 676 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (771)
++|+.+++++|++++.++++||+|+|+|+||++++.++.++|++|+++|+.+|+.++..+...... ......++.
T Consensus 506 ~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~--~~~~~~~g~--- 580 (695)
T 2bkl_A 506 FDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGSG--RTWIPEYGT--- 580 (695)
T ss_dssp HHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTG--GGGHHHHCC---
T ss_pred HHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccCCC--cchHHHhCC---
Confidence 899999999999998889999999999999999999999999999999999999987654332211 111122221
Q ss_pred CcCCCCCChhhHHHHhhcCccccccCCC--CcEEEEeeCCCCccCcHHHHHHHHHHHh---CCCCEEEEEeCCCCccCCC
Q 004149 677 DSFTESPSVEDLTRFHSKSPISHISKVK--TPTIFLLGAQDLRVPVSNGLQYARALRE---KGVETKVIVFPNDVHGIER 751 (771)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~sp~~~~~~i~--~P~Lii~G~~D~~vp~~~~~~~~~~l~~---~g~~~~~~~~~~~~H~~~~ 751 (771)
....+....+...+|+.++.+++ +|+||+||++|.+||+.++.+++++|++ .|.++++++++++||++..
T Consensus 581 -----~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~gH~~~~ 655 (695)
T 2bkl_A 581 -----AEKPEDFKTLHAYSPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPATALLRIEANAGHGGAD 655 (695)
T ss_dssp -----TTSHHHHHHHHHHCGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCSCEEEEEETTCBTTBCS
T ss_pred -----CCCHHHHHHHHhcChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCCCEEEEEeCCCCcCCCC
Confidence 11234556677889999998876 7999999999999999999999999998 6789999999999999864
Q ss_pred C-CChHHHHHHHHHHHHHHhC
Q 004149 752 P-QSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 752 ~-~~~~~~~~~i~~wl~~~l~ 771 (771)
+ ....+.+..+.+||.++|+
T Consensus 656 ~~~~~~~~~~~~~~fl~~~l~ 676 (695)
T 2bkl_A 656 QVAKAIESSVDLYSFLFQVLD 676 (695)
T ss_dssp CHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHcC
Confidence 3 3355678889999999874
No 7
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=1.3e-50 Score=477.14 Aligned_cols=598 Identities=18% Similarity=0.224 Sum_probs=410.7
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCC-CCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCC
Q 004149 46 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKEN-ENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESP 124 (771)
Q Consensus 46 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~ 124 (771)
.+..||||++|+|... ..++++++.+.. ...++++... ..+..++|||||++|||+++.
T Consensus 113 ~~~~SpDg~~l~~~~~----------~~i~~~d~~~~~~~~~~~l~~~~-----~~~~~~~~SPDG~~la~~~~~----- 172 (741)
T 2ecf_A 113 DYQWSPDAQRLLFPLG----------GELYLYDLKQEGKAAVRQLTHGE-----GFATDAKLSPKGGFVSFIRGR----- 172 (741)
T ss_dssp CCEECTTSSEEEEEET----------TEEEEEESSSCSTTSCCBCCCSS-----SCEEEEEECTTSSEEEEEETT-----
T ss_pred eeEECCCCCEEEEEeC----------CcEEEEECCCCCcceEEEcccCC-----cccccccCCCCCCEEEEEeCC-----
Confidence 4456889999999863 478888774331 0445555443 457889999999999999753
Q ss_pred eEEEEe-cCCcceEEEecCCc-c----cccccCC--CcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCC
Q 004149 125 IQFELW-SQSQLEKEFHVPQT-V----HGSVYAD--GWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCN 196 (771)
Q Consensus 125 ~~~~~~-~~~~~~~~~~~~~~-~----~g~~~~~--~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (771)
+++.++ .+++..+++..... + ...++.+ .....++|||||++|+|.+.+..... .+... ..... .
T Consensus 173 ~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~-~~~~~-----~~~p~-~ 245 (741)
T 2ecf_A 173 NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVP-VQKRY-----EVYAD-R 245 (741)
T ss_dssp EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSC-EEEEE-----EECSS-C
T ss_pred cEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCc-eEecC-----CCCCC-c
Confidence 477777 55555554432211 0 0000000 01257999999999999876542211 00000 00000 0
Q ss_pred CCCCcccccCCcCcccCCccCceEEEEEccC-CceeeccCC-CCCCccceEEEecCCCCCccEEEEEeecCcceeeeeee
Q 004149 197 SWKGQGDWEEDWGETYAGKRQPSLFVININS-GEVQAVKGI-PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKY 274 (771)
Q Consensus 197 ~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~-~~~~~l~~~-~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~ 274 (771)
.....+.|... |+ ......|+++|+++ ++.+.+... .....+..++| |||+. |++.+....
T Consensus 246 ~~~~~~~~~~~-g~---~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~----l~~~~~~~~-------- 308 (741)
T 2ecf_A 246 TDVIEQRYPAA-GD---ANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQH----LSFQRQSRD-------- 308 (741)
T ss_dssp EEEEEEECCBT-TS---CCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTE----EEEEEEETT--------
T ss_pred ccceEeecCCC-CC---CCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCE----EEEEEeccc--------
Confidence 00001111111 11 11235899999999 988777311 23446778999 99999 998874221
Q ss_pred eccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCc-----cccceeecCCCCEEEEEecCCCCCCCCccccc
Q 004149 275 CYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS-----SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATD 349 (771)
Q Consensus 275 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~-----~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~ 349 (771)
.....|+++|+ .+++.+.+..... .+..+.|||||+ ++|.+..+ | ..
T Consensus 309 --~~~~~i~~~d~-----------------~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~----g----~~ 360 (741)
T 2ecf_A 309 --QKKLDLVEVTL-----------------ASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERT----G----FQ 360 (741)
T ss_dssp --SSEEEEEEEET-----------------TTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTT----S----SC
T ss_pred --CCeEEEEEEEC-----------------CCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCC----C----cc
Confidence 12348999998 7777666543322 346899999999 66766553 2 46
Q ss_pred cceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCC-ccccCCCEEEEEeeeCC--eeEEEEEECCCCcEE
Q 004149 350 SLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSN-PWLSDGCTMLLSSIWGS--SQVIISVNVSSGELL 426 (771)
Q Consensus 350 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~-~~s~dg~~l~~~~~~~~--~~~l~~~d~~tg~~~ 426 (771)
+||.+|+.++ .+.++..... +..+ .|||||+.|++.+..++ ..+||.++..++..+
T Consensus 361 ~l~~~~~~~~-~~~l~~~~~~--------------------v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~ 419 (741)
T 2ecf_A 361 HLYRIDSKGK-AAALTHGNWS--------------------VDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQ 419 (741)
T ss_dssp EEEEECSSSC-EEESCCSSSC--------------------EEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCE
T ss_pred EEEEEcCCCC-eeeeeecceE--------------------EEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCee
Confidence 7999987654 4444332211 2233 59999999998887665 778999998777788
Q ss_pred EecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCCCCCCCchhhhh-ccccC--cc-eee
Q 004149 427 RITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKS-LLSSR--QF-SIM 502 (771)
Q Consensus 427 ~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~--~~-~~~ 502 (771)
+|+... ......||+||+.|++..+++..|+++++.+...+. +. .+. ..+..+.. .+... .+ ...
T Consensus 420 ~l~~~~-~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~----~~--~l~----~~~~~~~~~~~~~~~~~~~~~~ 488 (741)
T 2ecf_A 420 RLSKAP-GMHSASFARNASVYVDSWSNNSTPPQIELFRANGEK----IA--TLV----ENDLADPKHPYARYREAQRPVE 488 (741)
T ss_dssp ECCCSC-SEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCE----EE--CSS----CCCSSSTTSTTHHHHTTCCCEE
T ss_pred ecccCC-CceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCe----EE--Eec----cCcccccccchhhhhccCCCcE
Confidence 888733 345678999999999999999999999998864321 11 111 10100000 01111 11 111
Q ss_pred eecccCcccccccCCC-ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-Ccch-----HHHHHHHHCCcEEEEECCC
Q 004149 503 KIPVKGVSANLTKGAQ-KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYS-----KSLAFLSSVGYSLLIVNYR 575 (771)
Q Consensus 503 ~i~~~~~~~~~~~~~g-~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~-~~~~-----~~~~~la~~G~~V~~~d~r 575 (771)
.+ .+...+| .+++++++.|++..+.++.|+||++||++..... ..|. ..++.|+++||.|+++|+|
T Consensus 489 ~~-------~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~r 561 (741)
T 2ecf_A 489 FG-------TLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNR 561 (741)
T ss_dssp EE-------EEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCT
T ss_pred EE-------EEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecC
Confidence 12 3445678 8999999999876556778999999998876421 2343 5788899999999999999
Q ss_pred CCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhh
Q 004149 576 GSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 655 (771)
Q Consensus 576 G~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~ 655 (771)
|.++++..+.......++...++|+.++++++.+++.++.++|+|+||||||++++.++.++|++++++|+.+|+.++..
T Consensus 562 G~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~ 641 (741)
T 2ecf_A 562 GTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGL 641 (741)
T ss_dssp TCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGG
T ss_pred CCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhh
Confidence 99888887776666667677799999999999998778889999999999999999999999999999999999887542
Q ss_pred hhcCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCC
Q 004149 656 MVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGV 735 (771)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~ 735 (771)
+. ..+.+.+ ... .......+...+|...+.++++|+|++||++|.++|++++.+++++|+..++
T Consensus 642 ~~-------~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~ 705 (741)
T 2ecf_A 642 YD-------SHYTERY--------MDL-PARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQ 705 (741)
T ss_dssp SB-------HHHHHHH--------HCC-TGGGHHHHHHHCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTC
T ss_pred hc-------cccchhh--------cCC-cccChhhhhhcCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCC
Confidence 21 0111111 111 1234556667889999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 736 ETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 736 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
+++++++++++|.+..... .++++.+.+||+++|+
T Consensus 706 ~~~~~~~~~~~H~~~~~~~-~~~~~~i~~fl~~~l~ 740 (741)
T 2ecf_A 706 PFELMTYPGAKHGLSGADA-LHRYRVAEAFLGRCLK 740 (741)
T ss_dssp CCEEEEETTCCSSCCHHHH-HHHHHHHHHHHHHHHC
T ss_pred ceEEEEECCCCCCCCCCch-hHHHHHHHHHHHHhcC
Confidence 9999999999999874433 6788999999999986
No 8
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-50 Score=474.73 Aligned_cols=607 Identities=14% Similarity=0.143 Sum_probs=405.3
Q ss_pred EEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCc---cceeecCCccccccceEEEeCCCCCeEEEEecCCC
Q 004149 45 TFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENS---VTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN 121 (771)
Q Consensus 45 ~~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~ 121 (771)
..+..||||++|+|.......-+......++++++.++ +. .+++ ..+..++|||||++|||+++.
T Consensus 63 ~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g--~~~~~~~l~--------~~~~~~~~SPDG~~la~~~~~-- 130 (719)
T 1z68_A 63 SNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNG--EFVRGNELP--------RPIQYLCWSPVGSKLAYVYQN-- 130 (719)
T ss_dssp SEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT--EECCSSCCC--------SSBCCEEECSSTTCEEEEETT--
T ss_pred eeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCC--ccccceecC--------cccccceECCCCCEEEEEECC--
Confidence 34566899999999876432111123468888876433 33 3332 346789999999999999753
Q ss_pred CCCeEEEEe-cCCcceEEEecCCc------ccccccCCC---cccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCC
Q 004149 122 ESPIQFELW-SQSQLEKEFHVPQT------VHGSVYADG---WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSS 191 (771)
Q Consensus 122 ~~~~~~~~~-~~~~~~~~~~~~~~------~~g~~~~~~---~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~ 191 (771)
.++..+ .++..++++..... ....+|.++ ...+++|||||++|||.+.+..... .+........
T Consensus 131 ---~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~-~~~~~~~~~~-- 204 (719)
T 1z68_A 131 ---NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIP-VIAYSYYGDE-- 204 (719)
T ss_dssp ---EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSC-EEEEEECCSS--
T ss_pred ---eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCc-eEEeeccCCC--
Confidence 366665 45555555432110 001111111 1148999999999999886542211 1110000000
Q ss_pred CccCCCCCCcccccCCcCcccCCccCceEEEEEccCCcee---eccC----CCCCCccceEEEecCCCCCccEEEEEeec
Q 004149 192 DKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ---AVKG----IPKSLSVGQVVWAPLNEGLHQYLVFVGWS 264 (771)
Q Consensus 192 ~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~---~l~~----~~~~~~~~~~~wspDg~~~~~~l~~~~~~ 264 (771)
.......+.|... |. ......|++||+++++.. .+.. ......+..++|||||+ ++|+...
T Consensus 205 ---~~~~~~~~~yp~~-g~---~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~-----~~~~~~~ 272 (719)
T 1z68_A 205 ---QYPRTINIPYPKA-GA---KNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER-----VCLQWLK 272 (719)
T ss_dssp ---SSCEEEEEECCBT-TS---CCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE-----EEEEEEE
T ss_pred ---CCccceeecCCCC-CC---CCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe-----EEEEEec
Confidence 0000011222211 11 113358999999998753 4410 11334567899999965 6665321
Q ss_pred CcceeeeeeeeccCCceeEEEe----cccccchhhhhhhhcCCCCCCcceecC-----CCCcccc-----ceeecCCCCE
Q 004149 265 SETRKLGIKYCYNRPCALYAVR----VSLYKSEASELELKESSSEDLPVVNLT-----ESISSAF-----FPRFSPDGKF 330 (771)
Q Consensus 265 ~~~~~~g~~~~~~~~~~l~~~d----~~~~~~~~~~~~~~~~~~~~~~~~~lt-----~~~~~~~-----~p~~SpDG~~ 330 (771)
.. .....|+++| + .+++.+.++ .+...+. .|.|||||+.
T Consensus 273 ~~----------~~~~~l~~~d~~~~~-----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 325 (719)
T 1z68_A 273 RV----------QNVSVLSICDFREDW-----------------QTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAIS 325 (719)
T ss_dssp SS----------TTEEEEEEEEECSSS-----------------SSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSC
T ss_pred cc----------cCeEEEEEEcccCCC-----------------CCCceEEEEecccccCCceEccccCCccEECCCCCe
Confidence 11 1223799999 6 667766666 2233344 8999999999
Q ss_pred EEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeee-
Q 004149 331 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW- 409 (771)
Q Consensus 331 l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~- 409 (771)
|+|..... .+..+|+++|+.+++.+.++....+ +..+.++ ||+.|+|++..
T Consensus 326 l~~~~~~~-------~g~~~l~~~~~~~~~~~~lt~~~~~--------------------v~~~~~~-d~~~i~~~~~~~ 377 (719)
T 1z68_A 326 YYKIFSDK-------DGYKHIHYIKDTVENAIQITSGKWE--------------------AINIFRV-TQDSLFYSSNEF 377 (719)
T ss_dssp EEEEEECT-------TSCEEEEEESSCSTTCEECSCSSSC--------------------EEEEEEE-CSSEEEEEESCG
T ss_pred EEEEEEcc-------CCceEEEEEECCCCceEecccCceE--------------------EEEEEEE-eCCEEEEEEecC
Confidence 99965543 1246799999988776555433211 1123455 89999998876
Q ss_pred ---CCeeEEEEEECCCC--cEEEecCC----CCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccC
Q 004149 410 ---GSSQVIISVNVSSG--ELLRITPA----ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVS 480 (771)
Q Consensus 410 ---~~~~~l~~~d~~tg--~~~~l~~~----~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~ 480 (771)
.+..+||.+++++| +.++++.. ...+....|++|++.+++.+++++.| .+++.++.+++ .+.
T Consensus 378 ~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p-~~~l~d~~~g~---~~~----- 448 (719)
T 1z68_A 378 EEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIP-ISTLHDGRTDQ---EIK----- 448 (719)
T ss_dssp GGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSC-EEEEECSSSCC---EEE-----
T ss_pred CCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCC-eEEEEECCCCC---EEE-----
Confidence 57789999998776 46777642 22345578999999999999999888 57777765442 111
Q ss_pred CCCCCCchhhhhccccCcc-eeeeecccCcccccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CCcch-H
Q 004149 481 SPISRCPEKVKSLLSSRQF-SIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYS-K 557 (771)
Q Consensus 481 ~~~~~~~~~~~~~l~~~~~-~~~~i~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~~~~-~ 557 (771)
+.+.++.+...+....+ ....+ ++...+ .+++++++.|+++.+.++.|+||++||++.... ...|. .
T Consensus 449 --~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~ 518 (719)
T 1z68_A 449 --ILEENKELENALKNIQLPKEEIK-------KLEVDE-ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVN 518 (719)
T ss_dssp --EEECCHHHHHHTTSBCCCEEEEE-------EEEETT-EEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCC
T ss_pred --EeecchhhhhhhccccCCceEEE-------EEecCC-eEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhh
Confidence 11223333222333222 11112 233344 889999999987666778999999999887643 22332 2
Q ss_pred HHHHH-HHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHh
Q 004149 558 SLAFL-SSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ 636 (771)
Q Consensus 558 ~~~~l-a~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~ 636 (771)
....| +++||.|+++|+||.++++..+.......++...++|+.++++++.+++.+|++|++|+||||||++++.++.+
T Consensus 519 ~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 598 (719)
T 1z68_A 519 WISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALAS 598 (719)
T ss_dssp HHHHHHHTTCCEEEEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTT
T ss_pred HHHHHHhcCCeEEEEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHh
Confidence 34444 57999999999999999888877666667777789999999999999877889999999999999999999999
Q ss_pred CCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCCcCCCCC-ChhhHHHHhhcCccccccCCCC-cEEEEeeCC
Q 004149 637 APDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESP-SVEDLTRFHSKSPISHISKVKT-PTIFLLGAQ 714 (771)
Q Consensus 637 ~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~sp~~~~~~i~~-P~Lii~G~~ 714 (771)
+|++++++|+.+|+.++..+. ..+.+.+. +.+ ..+....+...+|...+.++++ |+||+||++
T Consensus 599 ~p~~~~~~v~~~~~~~~~~~~-------~~~~~~~~--------g~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~ 663 (719)
T 1z68_A 599 GTGLFKCGIAVAPVSSWEYYA-------SVYTERFM--------GLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTA 663 (719)
T ss_dssp SSSCCSEEEEESCCCCTTTSB-------HHHHHHHH--------CCSSTTTTHHHHHHTCSGGGGGGGTTSEEEEEEETT
T ss_pred CCCceEEEEEcCCccChHHhc-------cccchhhc--------CCcccccchhhhhhCCHhHHHhcCCCCcEEEEEeCC
Confidence 999999999999988754320 11111110 111 1233456677788888999988 899999999
Q ss_pred CCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 715 DLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 715 D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
|.++|++++.+++++|++.+++++++++++++|.+ ..+...++++.+.+||+++|+
T Consensus 664 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~l~ 719 (719)
T 1z68_A 664 DDNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGL-SGLSTNHLYTHMTHFLKQCFS 719 (719)
T ss_dssp CSSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTC-CTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCC-CcccHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999998 445567889999999999985
No 9
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=1.6e-49 Score=465.65 Aligned_cols=587 Identities=14% Similarity=0.125 Sum_probs=402.6
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeec-CCCCccceeecC-Ccccc-ccceEEEeCCCCCeEEEEecCCCC-
Q 004149 47 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISK-ENENSVTFQWAP-FPVEM-TGASAVVPSPSGSKLLVVRNPENE- 122 (771)
Q Consensus 47 ~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lt~~~-~~~~~-~~~~~~~~SPdG~~la~~~~~~~~- 122 (771)
+..++||++++|...... .....+|+.+... ++++..+|.... +.... .....++|||||++|||.+...+.
T Consensus 112 ~~p~pdG~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e 187 (741)
T 1yr2_A 112 GLPQRRGASVFYSWNSGL----MNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSD 187 (741)
T ss_dssp CCCEEETTEEEEEEECSS----CSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCS
T ss_pred CCCEEECCEEEEEEEcCC----CeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCc
Confidence 334579999999886432 3356788866421 033445543322 11110 246789999999999999876532
Q ss_pred CCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCc
Q 004149 123 SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQ 201 (771)
Q Consensus 123 ~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (771)
..++++++ .+++.......... +..++|||| +.|+|.+.+.....
T Consensus 188 ~~~i~v~dl~tg~~~~~~~~~~~----------~~~~~wspD-~~l~~~~~~~~~~~----------------------- 233 (741)
T 1yr2_A 188 WRTVKFVGVADGKPLADELKWVK----------FSGLAWLGN-DALLYSRFAEPKEG----------------------- 233 (741)
T ss_dssp EEEEEEEETTTCCEEEEEEEEEE----------SCCCEESTT-SEEEEEECCCC--------------------------
T ss_pred eEEEEEEECCCCCCCCccCCCce----------eccEEEECC-CEEEEEEecCcccc-----------------------
Confidence 25677777 56655433211111 258899999 99999875542100
Q ss_pred ccccCCcCcccCCccCceEEEEEccCCce--eeccCCCC-CCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccC
Q 004149 202 GDWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIPK-SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNR 278 (771)
Q Consensus 202 ~~~~~d~g~~~~~~~~~~l~v~d~~~~~~--~~l~~~~~-~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~ 278 (771)
++.........||++++.++.. +.+...+. ......+.|||||+. |+|.+.... +.
T Consensus 234 -------~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~----l~~~~~~~~----------~~ 292 (741)
T 1yr2_A 234 -------QAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRW----VVITSSEGT----------DP 292 (741)
T ss_dssp ------------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCE----EEEEEECTT----------CS
T ss_pred -------cccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCE----EEEEEEccC----------CC
Confidence 0000011246899999988763 23311112 123668899999999 999885331 12
Q ss_pred CceeEEEecccccchhhhhhhhcCCCCCC--c-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeee
Q 004149 279 PCALYAVRVSLYKSEASELELKESSSEDL--P-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRID 355 (771)
Q Consensus 279 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d 355 (771)
..+||++|+ +++ + .++|+........+ ++|||++|+|.++.. ....+|+++|
T Consensus 293 ~~~l~~~d~-----------------~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~-------~~~~~l~~~d 347 (741)
T 1yr2_A 293 VNTVHVARV-----------------TNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDG-------APLKKIVRVD 347 (741)
T ss_dssp CCEEEEEEE-----------------ETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTT-------CTTCEEEEEE
T ss_pred cceEEEEEC-----------------CCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCC-------CCCCEEEEEe
Confidence 358999998 555 5 67777665555556 469999999999874 2356899999
Q ss_pred cCCCC--CCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC-C
Q 004149 356 WPTNG--NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA-E 432 (771)
Q Consensus 356 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~-~ 432 (771)
+.++. .+.+..... . .+..+.|+ +..|+++...++..+||.++++++..+.++.+ .
T Consensus 348 ~~~~~~~~~~l~~~~~-----------~--------~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~ 406 (741)
T 1yr2_A 348 LSGSTPRFDTVVPESK-----------D--------NLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGI 406 (741)
T ss_dssp CSSSSCEEEEEECCCS-----------S--------EEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSS
T ss_pred CCCCccccEEEecCCC-----------C--------eEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCC
Confidence 87642 111111110 0 12234455 55788888889999999999877667777643 3
Q ss_pred CCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCCCCCCCchhhhhccccCcceeeeecccCcccc
Q 004149 433 SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSAN 512 (771)
Q Consensus 433 ~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~ 512 (771)
+.+....++++++.+++..++.++|.++|+.++.+++ .+ .+..+...++ ...+....+ .
T Consensus 407 ~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~--~~----~l~~~~~~~~--------~~~~~~~~~-------~ 465 (741)
T 1yr2_A 407 GSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK--TT----PWEPVHLTFD--------PADFRVEQV-------F 465 (741)
T ss_dssp CEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE--EE----ECSCCCCSSC--------GGGEEEEEE-------E
T ss_pred eEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc--EE----EEecCCCCCC--------hhHCEEEEE-------E
Confidence 3344556788999999999999999999999986543 11 1111111111 111222222 3
Q ss_pred cccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCc
Q 004149 513 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 592 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~ 592 (771)
+...+|.+++++++.|++. .++.|+||++||+++......|......|+++||+|+++|+||++++|..|........
T Consensus 466 ~~~~dg~~i~~~~~~p~~~--~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~~~ 543 (741)
T 1yr2_A 466 YPSKDGTKVPMFIVRRKDA--KGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRRDK 543 (741)
T ss_dssp EECTTSCEEEEEEEEETTC--CSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSGGG
T ss_pred EEcCCCCEEEEEEEecCCC--CCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhhhc
Confidence 4556789999999999854 56789999999998876666777777889999999999999999999998877655555
Q ss_pred cccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhcc
Q 004149 593 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 672 (771)
Q Consensus 593 ~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~ 672 (771)
....++|+.+++++|++++.++++||+|+|+|+||++++.++.++|++|+++|+.+|+.++..+........| ...++
T Consensus 544 ~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~--~~~~g 621 (741)
T 1yr2_A 544 KQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTAGRYW--VDDYG 621 (741)
T ss_dssp THHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTTGGGG--HHHHC
T ss_pred CCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCCCCchh--HHHcC
Confidence 5567899999999999998889999999999999999999999999999999999999887654322211111 12222
Q ss_pred CCCCCcCCCCCChhhHHHHhhcCccccccC-CCC-cEEEEeeCCCCccCcHHHHHHHHHHHh---CCCCEEEEEeCCCCc
Q 004149 673 SKGKDSFTESPSVEDLTRFHSKSPISHISK-VKT-PTIFLLGAQDLRVPVSNGLQYARALRE---KGVETKVIVFPNDVH 747 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~-i~~-P~Lii~G~~D~~vp~~~~~~~~~~l~~---~g~~~~~~~~~~~~H 747 (771)
. ....+..+.+...+|+.++.+ +++ |+||+||++|.+||+.++.+++++|+. .|.++++++++++||
T Consensus 622 ~--------~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~gH 693 (741)
T 1yr2_A 622 Y--------PEKEADWRVLRRYSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRAGH 693 (741)
T ss_dssp C--------TTSHHHHHHHHTTCGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC-----
T ss_pred C--------CCCHHHHHHHHHcCchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCCCc
Confidence 1 112355667788899999987 884 999999999999999999999999999 888999999999999
Q ss_pred cCCCCC-ChHHHHHHHHHHHHHHhC
Q 004149 748 GIERPQ-SDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 748 ~~~~~~-~~~~~~~~i~~wl~~~l~ 771 (771)
++..+. ...+.+..+.+||.++|+
T Consensus 694 ~~~~~~~~~~~~~~~~~~fl~~~l~ 718 (741)
T 1yr2_A 694 GSGKPIDKQIEETADVQAFLAHFTG 718 (741)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 986542 335778899999999874
No 10
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=2.6e-49 Score=459.50 Aligned_cols=540 Identities=16% Similarity=0.141 Sum_probs=387.4
Q ss_pred cceEEEeCCCCCeEEEEecCCCC-CCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004149 100 GASAVVPSPSGSKLLVVRNPENE-SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
....++|||||++|||..+..+. ...+++++ .+++....+. .... +.+++|| ||+.|+|.+.+....
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k---------~~~~~Ws-Dg~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVK---------FSGISWL-GNEGFFYSSYDKPDG 198 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEE---------SCCCEEE-TTTEEEEEESSCCC-
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCce---------eccEEEe-CCCEEEEEEecCccc
Confidence 35678999999999999876532 35677777 5565443321 1110 1588999 999999998764210
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce--eeccCCCC--CCccceEEEecCCCC
Q 004149 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIPK--SLSVGQVVWAPLNEG 253 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~--~~l~~~~~--~~~~~~~~wspDg~~ 253 (771)
. +.-......+||++++.++.. +.+...+. ......+.|||||+.
T Consensus 199 ~-------------------------------~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~ 247 (693)
T 3iuj_A 199 S-------------------------------ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRF 247 (693)
T ss_dssp -------------------------------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCE
T ss_pred c-------------------------------cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCE
Confidence 0 000001346899999987653 33311111 223457899999999
Q ss_pred CccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC--cceecCCCCccccceeecCCCCEE
Q 004149 254 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL--PVVNLTESISSAFFPRFSPDGKFL 331 (771)
Q Consensus 254 ~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~lt~~~~~~~~p~~SpDG~~l 331 (771)
|++.+.... ...+||++|+ +++ +.++|+........+ |++||++|
T Consensus 248 ----l~~~~~~~~-----------~~~~i~~~d~-----------------~~~~~~~~~l~~~~~~~~~~-~~~~g~~l 294 (693)
T 3iuj_A 248 ----LLISAANST-----------SGNRLYVKDL-----------------SQENAPLLTVQGDLDADVSL-VDNKGSTL 294 (693)
T ss_dssp ----EEEEEESSS-----------SCCEEEEEET-----------------TSTTCCCEEEECSSSSCEEE-EEEETTEE
T ss_pred ----EEEEEccCC-----------CCcEEEEEEC-----------------CCCCCceEEEeCCCCceEEE-EeccCCEE
Confidence 998874322 2248999998 444 667787766655555 89999999
Q ss_pred EEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCC
Q 004149 332 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 411 (771)
Q Consensus 332 ~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~ 411 (771)
+|.++.+ ....+|+++|+.+++..... .+++ . .. .. . .|+++++.|++....++
T Consensus 295 ~~~t~~~-------~~~~~l~~~d~~~~~~~~~~----~l~~---~--~~--------~~-~-~~s~~g~~lv~~~~~~g 348 (693)
T 3iuj_A 295 YLLTNRD-------APNRRLVTVDAANPGPAHWR----DLIP---E--RQ--------QV-L-TVHSGSGYLFAEYMVDA 348 (693)
T ss_dssp EEEECTT-------CTTCEEEEEETTSCCGGGCE----EEEC---C--CS--------SC-E-EEEEETTEEEEEEEETT
T ss_pred EEEECCC-------CCCCEEEEEeCCCCCccccE----EEec---C--CC--------CE-E-EEEEECCEEEEEEEECC
Confidence 9999875 22468999999876541110 1111 0 00 01 1 79999999999998889
Q ss_pred eeEEEEEECCCCcEEEecCCC-CCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCCCCCCCchhh
Q 004149 412 SQVIISVNVSSGELLRITPAE-SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKV 490 (771)
Q Consensus 412 ~~~l~~~d~~tg~~~~l~~~~-~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (771)
..+|+.++++++..+.+..+. +......++++++.+++..+++++|.++|++++.+++ .+ .++... ..+
T Consensus 349 ~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~--~~-~l~~~~---~~~---- 418 (693)
T 3iuj_A 349 TARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA--IS-LYRASA---APF---- 418 (693)
T ss_dssp EEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC--EE-EEECCC---SSC----
T ss_pred eeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe--EE-EEEeCC---CCc----
Confidence 899999999888888886543 2233345567899999999999999999999986543 11 111110 011
Q ss_pred hhccccCcceeeeecccCcccccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEE
Q 004149 491 KSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLL 570 (771)
Q Consensus 491 ~~~l~~~~~~~~~i~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~ 570 (771)
....+....+ .+...+|.+++++++.|++....++.|+||++|||++......|...+..|+++||+|+
T Consensus 419 ----~~~~~~~~~~-------~~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~ 487 (693)
T 3iuj_A 419 ----KPEDYVSEQR-------FYQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYA 487 (693)
T ss_dssp ----CGGGEEEEEE-------EEECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEE
T ss_pred ----ChhhCeeEEE-------EEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEE
Confidence 1112223333 34556789999999999976667789999999999887666778888888999999999
Q ss_pred EECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCc
Q 004149 571 IVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 650 (771)
Q Consensus 571 ~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~ 650 (771)
++|+||++++|..|............++|+.+++++|++++.+|++||+|+|+|+||++++.++.++|++|+++|+.+|+
T Consensus 488 ~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~ 567 (693)
T 3iuj_A 488 VANLRGGGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGV 567 (693)
T ss_dssp EECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCC
T ss_pred EEeCCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCc
Confidence 99999999999999877666666677899999999999998899999999999999999999999999999999999999
Q ss_pred cchhhhhcCCCCCcchhhhhccCCCCCcCCCCCChhh-HHHHhhcCccccccC-CCCc-EEEEeeCCCCccCcHHHHHHH
Q 004149 651 CNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVED-LTRFHSKSPISHISK-VKTP-TIFLLGAQDLRVPVSNGLQYA 727 (771)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~sp~~~~~~-i~~P-~Lii~G~~D~~vp~~~~~~~~ 727 (771)
.++..+........| ...++. ....+. ...+...+|+.++.+ +++| +||+||++|.+||+.++.+++
T Consensus 568 ~d~~~~~~~~~~~~~--~~~~g~--------p~~~~~~~~~~~~~sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~ 637 (693)
T 3iuj_A 568 LDMLRYHTFTAGTGW--AYDYGT--------SADSEAMFDYLKGYSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFA 637 (693)
T ss_dssp CCTTTGGGSGGGGGC--HHHHCC--------TTSCHHHHHHHHHHCHHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHH
T ss_pred chhhhhccCCCchhH--HHHcCC--------ccCHHHHHHHHHhcCHHHhhcccCCCCceeEEecCCCCCCChhHHHHHH
Confidence 987654322111111 112221 112233 556778899999999 8987 999999999999999999999
Q ss_pred HHHHhC---CCCEEEEEeCCCCccCCCC-CChHHHHHHHHHHHHHHhC
Q 004149 728 RALREK---GVETKVIVFPNDVHGIERP-QSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 728 ~~l~~~---g~~~~~~~~~~~~H~~~~~-~~~~~~~~~i~~wl~~~l~ 771 (771)
++|+.. ++++++++++++||++..+ ....+.+..+.+||.++|+
T Consensus 638 ~~l~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 685 (693)
T 3iuj_A 638 ATLQADNAGPHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLYEMG 685 (693)
T ss_dssp HHHHHHCCSSSCEEEEEEC-------CHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhhCCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHHHcC
Confidence 999998 4799999999999998764 4556778899999999875
No 11
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=2.6e-49 Score=463.23 Aligned_cols=591 Identities=17% Similarity=0.229 Sum_probs=403.1
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeE
Q 004149 47 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 126 (771)
Q Consensus 47 ~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 126 (771)
...||| ++++|+.+ ..++++++. +++.++++... ..+..++|||||++|||+++. .+
T Consensus 87 ~~~spd-~~~~~~~~----------~~i~~~d~~--~~~~~~l~~~~-----~~~~~~~~SpdG~~la~~~~~-----~i 143 (706)
T 2z3z_A 87 TLDAGR-GLVVLFTQ----------GGLVGFDML--ARKVTYLFDTN-----EETASLDFSPVGDRVAYVRNH-----NL 143 (706)
T ss_dssp EEETTT-TEEEEEET----------TEEEEEETT--TTEEEEEECCT-----TCCTTCEECTTSSEEEEEETT-----EE
T ss_pred EEECCC-CeEEEEEC----------CEEEEEECC--CCceEEccCCc-----ccccCCcCCCCCCEEEEEECC-----eE
Confidence 345789 78888753 477887763 33555555433 446779999999999997542 46
Q ss_pred EEEe-cC-----CcceEEEecCCc-c-ccc-ccCC--CcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccC
Q 004149 127 FELW-SQ-----SQLEKEFHVPQT-V-HGS-VYAD--GWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDC 195 (771)
Q Consensus 127 ~~~~-~~-----~~~~~~~~~~~~-~-~g~-~~~~--~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (771)
+.++ .+ ++.++++..... + .|. ++.+ ....+++|||||++|+|.+.+..... .+............
T Consensus 144 ~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~-~~~~~~~~~~~~~~-- 220 (706)
T 2z3z_A 144 YIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVK-PTPIVDYHPLEAES-- 220 (706)
T ss_dssp EEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSC-CEEEEECCSSSCEE--
T ss_pred EEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCc-eEEeeccCCCCCce--
Confidence 6666 45 555555443221 0 000 0000 01258999999999999874432211 11100000000000
Q ss_pred CCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCC-CCCCccceEEEecCCCCCccEEEEEeecCcceeeeeee
Q 004149 196 NSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGI-PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKY 274 (771)
Q Consensus 196 ~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~-~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~ 274 (771)
....|... |. ......|++||+++++.+.+... .....+..++|||||+. |++.+....
T Consensus 221 ----~~~~y~~~-g~---~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~----l~~~~~~~~-------- 280 (706)
T 2z3z_A 221 ----KPLYYPMA-GT---PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENI----LYVAEVNRA-------- 280 (706)
T ss_dssp ----EEECCCBT-TS---CCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSE----EEEEEECTT--------
T ss_pred ----EEeeCCCC-CC---CCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCE----EEEEEeCCC--------
Confidence 00111111 11 12347899999999998777311 23345678999999998 988763221
Q ss_pred eccCCceeEEEecccccchhhhhhhhcCCCCCC-cceecCCC--Cc---cccceeecC--CCCEEEEEecCCCCCCCCcc
Q 004149 275 CYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTES--IS---SAFFPRFSP--DGKFLVFLSAKSSVDSGAHS 346 (771)
Q Consensus 275 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~lt~~--~~---~~~~p~~Sp--DG~~l~f~~~~~~~~~g~~~ 346 (771)
.....|+++|+ .++ ..+.+... .. ....+.||| ||+.| +.+..+ |
T Consensus 281 --~~~~~v~~~d~-----------------~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l-~~~~~~----g--- 333 (706)
T 2z3z_A 281 --QNECKVNAYDA-----------------ETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFI-WQSRRD----G--- 333 (706)
T ss_dssp --SCEEEEEEEET-----------------TTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEE-EEECTT----S---
T ss_pred --CCeeEEEEEEC-----------------CCCceeeEEEEccCCCeECccCCceeecCCCCEEE-EEEccC----C---
Confidence 12237999998 666 44444321 11 135789999 99854 555443 2
Q ss_pred ccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCC-CccccCCCEEEEEeeeCC--eeEEEEEECCCC
Q 004149 347 ATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILS-NPWLSDGCTMLLSSIWGS--SQVIISVNVSSG 423 (771)
Q Consensus 347 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~-~~~s~dg~~l~~~~~~~~--~~~l~~~d~~tg 423 (771)
..+||.++..++..+.++.... .+.. +.|+|||+.|++++..++ ...||.+++.++
T Consensus 334 -~~~l~~~~~~~~~~~~l~~~~~--------------------~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 334 -WNHLYLYDTTGRLIRQVTKGEW--------------------EVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG 392 (706)
T ss_dssp -SCEEEEEETTSCEEEECCCSSS--------------------CEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC
T ss_pred -ccEEEEEECCCCEEEecCCCCe--------------------EEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC
Confidence 4678888865544433332211 1122 579999999998887654 568999999999
Q ss_pred cEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCCCCCCCchhhhhccccCcceeee
Q 004149 424 ELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMK 503 (771)
Q Consensus 424 ~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 503 (771)
+.++++.... +....||+||+.+++.+++.+.|.++++.++.+++ ... ++ ..+ .+.. ......+.
T Consensus 393 ~~~~l~~~~~-~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~----~~~--~~----~~~-~~~~-~~~~~~~~-- 457 (706)
T 2z3z_A 393 KTKDLTPESG-MHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS----HTL--LE----AKN-PDTG-YAMPEIRT-- 457 (706)
T ss_dssp CCEESCCSSS-EEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE----EEE--EE----CC--------CCCCEEE--
T ss_pred CceeccCCCc-eEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe----Eee--cc----ccc-hhhh-cCCCCcEE--
Confidence 9888875433 55678999999999999999999999999876542 111 11 001 1100 01111111
Q ss_pred ecccCcccccccCCC-ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-CcchH----HHHHHHHCCcEEEEECCCCC
Q 004149 504 IPVKGVSANLTKGAQ-KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYSK----SLAFLSSVGYSLLIVNYRGS 577 (771)
Q Consensus 504 i~~~~~~~~~~~~~g-~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~-~~~~~----~~~~la~~G~~V~~~d~rG~ 577 (771)
..+...+| .++.++++.|+++++.+++|+||++||+++.... ..|.. .++.|+++||.|+++|+||.
T Consensus 458 -------~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~ 530 (706)
T 2z3z_A 458 -------GTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGS 530 (706)
T ss_dssp -------EEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTC
T ss_pred -------EEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCC
Confidence 23445567 8999999999876666788999999998876532 34544 57889999999999999999
Q ss_pred CCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhh
Q 004149 578 LGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV 657 (771)
Q Consensus 578 ~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~ 657 (771)
++++..+.......++...++|+.++++++.+++.+|.+|++|+||||||++++.++.++|++++++|+.+|+.++..+.
T Consensus 531 g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~ 610 (706)
T 2z3z_A 531 ANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRYA 610 (706)
T ss_dssp SSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGSB
T ss_pred cccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHHH
Confidence 98888877666667777778999999999988877888999999999999999999999999999999999988754221
Q ss_pred cCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCE
Q 004149 658 GTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVET 737 (771)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~ 737 (771)
..+.+.+ ...+ ....+.+...+|...+.++++|+|++||++|.++|++++++++++|++.++++
T Consensus 611 -------~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~~ 674 (706)
T 2z3z_A 611 -------IMYGERY--------FDAP-QENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTYP 674 (706)
T ss_dssp -------HHHHHHH--------HCCT-TTCHHHHHHHCGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCCC
T ss_pred -------hhhhhhh--------cCCc-ccChhhhhhCCHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCCe
Confidence 0111111 1111 23345667778888999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCccCCCCCChHHHHHHHHHHHHHHh
Q 004149 738 KVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 738 ~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
+++++|+++|.+... ...++++.+.+||+++|
T Consensus 675 ~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 675 DYYVYPSHEHNVMGP-DRVHLYETITRYFTDHL 706 (706)
T ss_dssp EEEEETTCCSSCCTT-HHHHHHHHHHHHHHHHC
T ss_pred EEEEeCCCCCCCCcc-cHHHHHHHHHHHHHHhC
Confidence 999999999998755 56788999999999886
No 12
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=2.9e-47 Score=444.45 Aligned_cols=597 Identities=14% Similarity=0.096 Sum_probs=404.3
Q ss_pred HHHHHHhhcCccccceEEEecCCCCcceEEEEEeechhhcccceeEEEEEEeec-CCC--C-ccceeecCCccccc--cc
Q 004149 28 SKLLQDFTNISSIDKAWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISK-ENE--N-SVTFQWAPFPVEMT--GA 101 (771)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~-~~~lt~~~~~~~~~--~~ 101 (771)
.+||+++...-..... ....++|.+++|+..... +....++..+... .++ . .+.+....+....+ ..
T Consensus 104 ~~l~~e~~~~~~~~~~---~~p~~~g~~~yy~~~~~g----~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~ 176 (751)
T 2xe4_A 104 DDIYAEHISHINEDDM---SAPYVYGKYRYYTREVKG----KPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDV 176 (751)
T ss_dssp HHHHHHHHHTSCSSEE---CCCEEETTEEEEEEECTT----CCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEE
T ss_pred HHHHHHHHHhcccccC---CCCeEECCEEEEEEECCC----CceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEE
Confidence 4567777655444331 111248889999865322 2233455543210 222 2 22222211111001 35
Q ss_pred eEEEeC-CCCCeEEEEecCCC-CCCeEEEEe-cCC-cceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004149 102 SAVVPS-PSGSKLLVVRNPEN-ESPIQFELW-SQS-QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 102 ~~~~~S-PdG~~la~~~~~~~-~~~~~~~~~-~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
..++|| |||++|||+.+..+ +..++++++ .++ +. +.. ... +.+.+++|||||+.|+|++.+...
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~---~~~------~~~~~~~WspDg~~l~y~~~d~~~- 244 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IAD---KVS------GTNGEIVWGPDHTSLFYVTKDETL- 244 (751)
T ss_dssp EEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCC---CEE------EECSCCEECSSTTEEEEEEECTTC-
T ss_pred eeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCc---ccc------CceeeEEEecCCCEEEEEEECCCC-
Confidence 679999 99999999988653 234588888 555 31 110 000 012589999999999998654210
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce--eeccCCCCCCccceEEEecCCCCCc
Q 004149 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIPKSLSVGQVVWAPLNEGLH 255 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~--~~l~~~~~~~~~~~~~wspDg~~~~ 255 (771)
...+||++++.++.. +.+...+......++.|||||+.
T Consensus 245 --------------------------------------~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~-- 284 (751)
T 2xe4_A 245 --------------------------------------RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNT-- 284 (751)
T ss_dssp --------------------------------------CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSE--
T ss_pred --------------------------------------CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCE--
Confidence 125899999988753 23310122223457899999999
Q ss_pred cEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC--cc--eecCCCCccccceeecCC---C
Q 004149 256 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL--PV--VNLTESISSAFFPRFSPD---G 328 (771)
Q Consensus 256 ~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~~--~~lt~~~~~~~~p~~SpD---G 328 (771)
|+|.++.. ..++||++|+ +++ +. +.|+... ..+.|||| |
T Consensus 285 --l~~~~~~~------------~~~~l~~~d~-----------------~~~~~~~~~~~l~~~~---~~~~~s~~~~~g 330 (751)
T 2xe4_A 285 --LCIGSQSP------------ETAEVHLLDL-----------------RKGNAHNTLEIVRPRE---KGVRYDVQMHGT 330 (751)
T ss_dssp --EEEEEECS------------SCEEEEEEES-----------------SSCTTCCCEEESSCCC---TTCCEEEEEETT
T ss_pred --EEEEecCC------------CCceEEEEEC-----------------CCCCCCceeEEeecCC---CCceEEEeeeeC
Confidence 99988532 2348999998 443 44 6666543 35567777 9
Q ss_pred CEEEEEecCCCCCCCCccccccceeeecCCC-CCCC-CccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEE
Q 004149 329 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTN-GNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLS 406 (771)
Q Consensus 329 ~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~-~~~~-~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~ 406 (771)
++|+|.++.+ + ....+|+++|+.+. +.+. +.....++ .+. .|+.+++.|++.
T Consensus 331 ~~l~~~t~~~----~--a~~~~L~~~d~~~~~~~~~~li~~~~~~------------------~l~--~~~~~~~~lv~~ 384 (751)
T 2xe4_A 331 SHLVILTNEG----G--AVNHKLLIAPRGQPSDWSHVLVDHSEDV------------------FME--SIAVRSNYLVVA 384 (751)
T ss_dssp TEEEEEECTT----T--CTTCEEEEEETTSTTCCCCEEECCCSSE------------------EEE--EEEECSSEEEEE
T ss_pred CEEEEEeCCC----C--CCCcEEEEEcCCCcccceeeEECCCCCc------------------EEE--EEEEECCEEEEE
Confidence 9999999874 1 23568999998752 3232 22111000 011 245567789999
Q ss_pred eeeCCeeEEEEEEC-------CCCc-EEEecCCCCCceeeEE------eecCCEEEEEEeCCCCCCeEEEEEecccCCCc
Q 004149 407 SIWGSSQVIISVNV-------SSGE-LLRITPAESNFSWSLL------TLDGDNIIAVSSSPVDVPQVKYGYFVDKANKG 472 (771)
Q Consensus 407 ~~~~~~~~l~~~d~-------~tg~-~~~l~~~~~~~~~~~~------s~d~~~l~~~~s~~~~p~~l~~~~~~~~~~~~ 472 (771)
...++...|+.+++ ++++ .++|+..... ....+ +.+++.+++..+++++|+++|++++.+++ .
T Consensus 385 ~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~~-~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~--~ 461 (751)
T 2xe4_A 385 GRRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPI-FTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS--R 461 (751)
T ss_dssp EEETTEEEEEEEECCTTTSCCCTTTCCEECCCCCSS-CEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC--E
T ss_pred EEeCCEEEEEEEecccccccccCCccceEECCCCce-eEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc--E
Confidence 99999999999996 6777 7888644332 22234 45888999999999999999999876543 1
Q ss_pred eeeeeccCCCCC-CCchhhhhccccCcceeeeecccCcccccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC
Q 004149 473 TWSWLNVSSPIS-RCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS 551 (771)
Q Consensus 473 ~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~ 551 (771)
..++.. +.. .++ ...+....+ .+...+|.+++++++.|++....++.|+||++|||++...
T Consensus 462 -~~l~~~--~~~~~~~--------~~~~~~~~~-------~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~ 523 (751)
T 2xe4_A 462 -TAVKVR--EVGGGFD--------AANYKVERR-------FATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSM 523 (751)
T ss_dssp -EEEEEC--CCCTTCC--------GGGEEEEEE-------EEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCC
T ss_pred -EEEecc--ccccCCC--------ccceEEEEE-------EEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCC
Confidence 111111 110 111 112222222 4455678999999999987655678999999999987765
Q ss_pred CCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhh-cCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHH
Q 004149 552 LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ-SLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLT 630 (771)
Q Consensus 552 ~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~-~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a 630 (771)
...|...+..|+++||+|+++|+||++++|..|.. .....++...++|+.+++++|++++.+|++||+|+|+|+||+++
T Consensus 524 ~~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la 603 (751)
T 2xe4_A 524 DPQFSIQHLPYCDRGMIFAIAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLM 603 (751)
T ss_dssp CCCCCGGGHHHHTTTCEEEEECCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHH
T ss_pred CCcchHHHHHHHhCCcEEEEEeeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHH
Confidence 55676677789999999999999999999999887 66555666789999999999999988999999999999999999
Q ss_pred HHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCc-EEE
Q 004149 631 THLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTP-TIF 709 (771)
Q Consensus 631 ~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P-~Li 709 (771)
+.++.++|++|+++|+.+|+.++..+......+... ..+ ..+......+....+...+|+.++.++++| +||
T Consensus 604 ~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~--~~~-----~~~g~p~~~~~~~~~~~~sp~~~~~~~~~Pp~Li 676 (751)
T 2xe4_A 604 GAVLNMRPDLFKVALAGVPFVDVMTTMCDPSIPLTT--GEW-----EEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNIMV 676 (751)
T ss_dssp HHHHHHCGGGCSEEEEESCCCCHHHHHTCTTSTTHH--HHT-----TTTCCTTSHHHHHHHHHHCTGGGCCSSCCCEEEE
T ss_pred HHHHHhCchheeEEEEeCCcchHHhhhcccCcccch--hhH-----HHcCCCCCHHHHHHHHhcChhhhhccCCCCceeE
Confidence 999999999999999999999987654332222111 111 011111123344567788999999999997 999
Q ss_pred EeeCCCCccCcHHHHHHHHHHHhCCC---CEEEEEeCCCCccCCCCC-ChHHHHHHHHHHHHHHhC
Q 004149 710 LLGAQDLRVPVSNGLQYARALREKGV---ETKVIVFPNDVHGIERPQ-SDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 710 i~G~~D~~vp~~~~~~~~~~l~~~g~---~~~~~~~~~~~H~~~~~~-~~~~~~~~i~~wl~~~l~ 771 (771)
+||++|.+||+.++.+++++|+..++ .+.+.++++++|++.... ...+.+..+.+||.++|+
T Consensus 677 i~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~ 742 (751)
T 2xe4_A 677 QCGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLK 742 (751)
T ss_dssp EEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred EeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999854 456777799999987543 334566789999999874
No 13
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=100.00 E-value=4e-38 Score=357.78 Aligned_cols=468 Identities=14% Similarity=0.137 Sum_probs=325.8
Q ss_pred ceEEEEEccCCc--eeec-cCCCCCCccceEEEecCCCCCccEE---EEEeecCcceeeeeeeeccCCceeEEEeccccc
Q 004149 218 PSLFVININSGE--VQAV-KGIPKSLSVGQVVWAPLNEGLHQYL---VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYK 291 (771)
Q Consensus 218 ~~l~v~d~~~~~--~~~l-~~~~~~~~~~~~~wspDg~~~~~~l---~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 291 (771)
..+|.+.+.+.. -+.+ .+...+. .-.+.-++|++. . ++++...+ ...+++|+++++.
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~-~~~~~~~~~~~~----~~~~~~i~~~~~----------~~~~~~~~~~~~~-- 278 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYI-YVSAGKLLSDTI----SSSLIFISANKD----------FYNYDNYILDTKY-- 278 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSC-EEEEEESSCTTT----CSSEEEEEEESS----------SSCEEEEEEECSS--
T ss_pred CEEEEEECCCChHHCeEEeccCCCce-EEEEEEecCCCc----eEEEEEEEEecc----------cCceeEEEEcCCC--
Confidence 578888876652 2222 2222222 223455778775 3 34431111 1235899998621
Q ss_pred chhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCC-----CC---
Q 004149 292 SEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN-----FS--- 363 (771)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~-----~~--- 363 (771)
..++.++|.... ...+.++++|+.+++...+... .|......+|+.+|+++... ..
T Consensus 279 -------------~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 342 (711)
T 4hvt_A 279 -------------KNLKLQKINMPS--DATLQGSFKEYVFWLLRSDWKF-KSHNIKAGSLVALHFTDLLKTESDKTSLKI 342 (711)
T ss_dssp -------------SSCEEEECCSCT--TCEEEEEETTEEEEECSSCEEE-TTEEECTTCEEEEEGGGGGSCGGGCTTCEE
T ss_pred -------------CCCcceEeecCC--cceEeeeECCEEEEEECccccc-ccccCCCCeEEEEECCcccccccccccceE
Confidence 224555663332 2335667777654444332110 01112346799999876321 10
Q ss_pred -CccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc--EEE-ecCC-CCCceee
Q 004149 364 -SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE--LLR-ITPA-ESNFSWS 438 (771)
Q Consensus 364 -~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~--~~~-l~~~-~~~~~~~ 438 (771)
++...+ ..+..+.|+.| .|++....++...|+.+++.+|+ .+. +..+ .+.+...
T Consensus 343 ~~~~~~~-------------------~~l~~~~~~~~--~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~ 401 (711)
T 4hvt_A 343 LFTPTAN-------------------EVFNFISTTKD--RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGM 401 (711)
T ss_dssp EECCCTT-------------------EEEEEEEECSS--CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEE
T ss_pred EECCCCC-------------------CeEEEEEEECC--EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEE
Confidence 111111 12345567765 58888888899999999987774 445 4433 2333334
Q ss_pred EEeecCCEEEEEEeCCCCCCeEEEEEecccCCCceeeeeccCCCCCCCchhhhhccccCcceeeeecccCcccccccCCC
Q 004149 439 LLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQ 518 (771)
Q Consensus 439 ~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~g 518 (771)
..+++++.+++..+++++|+++|++++. ++ . +.+..+ +. .+....+....+ .+...+|
T Consensus 402 ~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~--~----~~l~~~----~~----~~~~~~~~~e~v-------~~~s~DG 459 (711)
T 4hvt_A 402 SSYEEEEEALITIENSIVPPTIYLWVKT-HE--L----KIIRKA----LY----SFDSENYVLEQK-------EATSFDG 459 (711)
T ss_dssp ECCTTCSCEEEEEECSSSCCEEEEECTT-SC--E----EEEECC----SS----CCCGGGEEEEEE-------EEECTTS
T ss_pred eecCcCCEEEEEEecCCCCCEEEEEeCC-Cc--E----EEEecC----Cc----ccCcccCeeEEE-------EEECCCC
Confidence 4557888999999999999999999875 32 1 111111 11 111222222222 4556789
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHH-HHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccch
Q 004149 519 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV 597 (771)
Q Consensus 519 ~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~-~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~ 597 (771)
.+++++++.|++....++.|+||++|||++......|.... +.|+++||+|+++|+||++++|..|.......++...+
T Consensus 460 ~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~ 539 (711)
T 4hvt_A 460 VKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAF 539 (711)
T ss_dssp CEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHH
T ss_pred eEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcH
Confidence 99999999999776678899999999998877666776655 48899999999999999999999998887777777889
Q ss_pred hhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCC
Q 004149 598 NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKD 677 (771)
Q Consensus 598 ~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (771)
+|+.+++++|++++.+|++||+|+|+|+||+++++++.++|++|+++|+.+|+.++..+........| ...++.
T Consensus 540 ~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~~~~~~~--~~~~G~---- 613 (711)
T 4hvt_A 540 NDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKEFGAGHSW--VTEYGD---- 613 (711)
T ss_dssp HHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGG--HHHHCC----
T ss_pred HHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhccccchHH--HHHhCC----
Confidence 99999999999998899999999999999999999999999999999999999997665433222222 122222
Q ss_pred cCCCCCChhhHHHHhhcCccccccCCCC--cEEEEeeCCCCccCcHHHHHHHHHH-HhCCCCEEEEEeCCCCccCCCCC-
Q 004149 678 SFTESPSVEDLTRFHSKSPISHISKVKT--PTIFLLGAQDLRVPVSNGLQYARAL-REKGVETKVIVFPNDVHGIERPQ- 753 (771)
Q Consensus 678 ~~~~~~~~~~~~~~~~~sp~~~~~~i~~--P~Lii~G~~D~~vp~~~~~~~~~~l-~~~g~~~~~~~~~~~~H~~~~~~- 753 (771)
....+..+.+...||+.++.++++ |+||+||++|.+||+.++.+++++| ++.|++++++++++++|++....
T Consensus 614 ----p~~~~~~~~l~~~SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~ 689 (711)
T 4hvt_A 614 ----PEIPNDLLHIKKYAPLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLK 689 (711)
T ss_dssp ----TTSHHHHHHHHHHCGGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHH
T ss_pred ----CcCHHHHHHHHHcCHHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcc
Confidence 122355677888999999999886 9999999999999999999999999 99999999999999999986533
Q ss_pred ChHHHHHHHHHHHHHHhC
Q 004149 754 SDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 754 ~~~~~~~~i~~wl~~~l~ 771 (771)
.....+..+.+||.++|+
T Consensus 690 ~~~~~~~~i~~FL~~~Lg 707 (711)
T 4hvt_A 690 ESANYFINLYTFFANALK 707 (711)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHhC
Confidence 345566788999999985
No 14
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.92 E-value=1.3e-24 Score=234.30 Aligned_cols=318 Identities=14% Similarity=0.118 Sum_probs=201.9
Q ss_pred cCCCCccceeecCCccccccceE-----EEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCc
Q 004149 81 KENENSVTFQWAPFPVEMTGASA-----VVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGW 154 (771)
Q Consensus 81 ~~~~~~~~lt~~~~~~~~~~~~~-----~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~ 154 (771)
..+...++||..+ ..... |+|||||++|||.+..+ +..++|.++ .+++.++++......
T Consensus 18 ~~g~~~~~lt~~~-----~~~~~~~~~~~~~SpDg~~l~~~~~~~-g~~~l~~~d~~~g~~~~lt~~~~~~--------- 82 (388)
T 3pe7_A 18 STGAQVTRLTPPD-----VTCHRNYFYQKCFTRDGSKLLFGGAFD-GPWNYYLLDLNTQVATQLTEGRGDN--------- 82 (388)
T ss_dssp TTCCEEEECSCTT-----SCEECCCTTSCCBCTTSCEEEEEECTT-SSCEEEEEETTTCEEEECCCSSCBC---------
T ss_pred CCCcceEEecCCc-----ccccchhhcCccCCCCCCEEEEEEcCC-CCceEEEEeCCCCceEEeeeCCCCC---------
Confidence 3444566776554 22333 89999999999998754 567899888 666666666543222
Q ss_pred ccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCc--ccccCCcCcc---------------------
Q 004149 155 FEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQ--GDWEEDWGET--------------------- 211 (771)
Q Consensus 155 ~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~g~~--------------------- 211 (771)
...+.|||||++|+|.+...... .++...............+... ..+++|....
T Consensus 83 ~~~~~~spdg~~l~~~~~~~~l~--~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~ 160 (388)
T 3pe7_A 83 TFGGFLSPDDDALFYVKDGRNLM--RVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHE 160 (388)
T ss_dssp SSSCEECTTSSEEEEEETTTEEE--EEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHH
T ss_pred ccceEEcCCCCEEEEEeCCCeEE--EEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhh
Confidence 12678999999999998542110 1111111100000001111100 1112332111
Q ss_pred -cCCccCceEEEEEccCCceeeccCCCCCCccceEEEec-CCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEeccc
Q 004149 212 -YAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP-LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSL 289 (771)
Q Consensus 212 -~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wsp-Dg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 289 (771)
+.......|+++|+.+++.+.+ +.....+..+.||| ||+. |+|++.... .....+||.+|+
T Consensus 161 ~~~~~~~~~l~~~d~~~g~~~~l--~~~~~~~~~~~~sp~dg~~----l~~~~~~~~---------~~~~~~l~~~d~-- 223 (388)
T 3pe7_A 161 FYFTKPCCRLMRVDLKTGESTVI--LQENQWLGHPIYRPYDDST----VAFCHEGPH---------DLVDARMWLINE-- 223 (388)
T ss_dssp HGGGCCCEEEEEEETTTCCEEEE--EEESSCEEEEEEETTEEEE----EEEEECSCT---------TTSSCSEEEEET--
T ss_pred hhccCCcceEEEEECCCCceEEe--ecCCccccccEECCCCCCE----EEEEEecCC---------CCCcceEEEEeC--
Confidence 1122347899999999999888 45555678899999 9999 999874211 012458999998
Q ss_pred ccchhhhhhhhcCCCCCCcceecCCCCc--cccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccc
Q 004149 290 YKSEASELELKESSSEDLPVVNLTESIS--SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK 367 (771)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~lt~~~~--~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~ 367 (771)
+++..++|+.... .+..|.|||||++|+|.+.+. | .....|+++|+.+++.+.++..
T Consensus 224 ---------------~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~----~--~~~~~l~~~d~~~g~~~~l~~~ 282 (388)
T 3pe7_A 224 ---------------DGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLK----G--SPDRFIYSADPETLENRQLTSM 282 (388)
T ss_dssp ---------------TSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEET----T--CCCEEEEEECTTTCCEEEEEEE
T ss_pred ---------------CCCceEEeeeCCCCcccccceECCCCCEEEEEecCC----C--CCcceEEEEecCCCceEEEEcC
Confidence 7778888887653 477899999999999998764 2 1123599999998876444321
Q ss_pred eeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeee------CCeeEEEEEECCCCcEEEecCCCC--------
Q 004149 368 IVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW------GSSQVIISVNVSSGELLRITPAES-------- 433 (771)
Q Consensus 368 ~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~------~~~~~l~~~d~~tg~~~~l~~~~~-------- 433 (771)
... . .+........|||||+.|++.... .+...||++|+++++.++|+....
T Consensus 283 ~~~-~-------------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~ 348 (388)
T 3pe7_A 283 PAC-S-------------HLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGD 348 (388)
T ss_dssp CCE-E-------------EEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTB
T ss_pred CCc-e-------------eeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccc
Confidence 110 0 000113345799999999887643 556789999999999999986654
Q ss_pred ---CceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 434 ---NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 434 ---~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
....+.|++||+.|++.+.. ...++||++++.+.
T Consensus 349 ~~~~~~~~~~spDg~~l~~~s~~-~g~~~l~~~~l~~~ 385 (388)
T 3pe7_A 349 RQVTHPHPSFTPDDKQILFTSDV-HGKPALYLATLPES 385 (388)
T ss_dssp SSTTCCCCEECTTSSEEEEEECT-TSSCEEEEEECCGG
T ss_pred cccCCCCccCCCCCCEEEEEecC-CCceeEEEEECChh
Confidence 34557899999999988765 45567999887643
No 15
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=99.92 E-value=6.3e-24 Score=214.66 Aligned_cols=209 Identities=17% Similarity=0.182 Sum_probs=143.8
Q ss_pred ccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcc
Q 004149 514 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 514 ~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~ 593 (771)
...||.+|.++++.|. ...+.|+||++||++.......+...++.|+++||+|+++|+||+++++............
T Consensus 36 ~~~dG~~i~g~l~~P~---~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~ 112 (259)
T 4ao6_A 36 LEVDGRTVPGVYWSPA---EGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREPTDVV 112 (259)
T ss_dssp EEETTEEEEEEEEEES---SSCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-------------CCGG
T ss_pred EeeCCeEEEEEEEeCC---CCCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCcccccccchhh
Confidence 3568999999999998 4567799999999887654556777889999999999999999976554332211111110
Q ss_pred ---------------ccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhc
Q 004149 594 ---------------SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG 658 (771)
Q Consensus 594 ---------------~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~ 658 (771)
...+.|..++++++... +|++||+++|+|+||++++.++...|+ ++++|+..+....
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~--~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~~~~----- 184 (259)
T 4ao6_A 113 GLDAFPRMWHEGGGTAAVIADWAAALDFIEAE--EGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMGVEG----- 184 (259)
T ss_dssp GSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--HCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCCTTS-----
T ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--cCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEecccccc-----
Confidence 11234667777777655 578999999999999999999998775 6666654332110
Q ss_pred CCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEE
Q 004149 659 TTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 738 (771)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~ 738 (771)
.. ..++...+.+|++|+|++||++|.+||++++.++++++.. .+.+
T Consensus 185 ------------------------~~--------~~~~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~--~~k~ 230 (259)
T 4ao6_A 185 ------------------------VN--------GEDLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGT--KQKT 230 (259)
T ss_dssp ------------------------TT--------HHHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCC--SSEE
T ss_pred ------------------------cc--------ccchhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhCC--CCeE
Confidence 00 1123455678999999999999999999999999998843 4577
Q ss_pred EEEeCCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 739 VIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 739 ~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
++++++..|.+ ...+.+..+++||++|||
T Consensus 231 l~~~~G~H~~~----p~~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 231 LHVNPGKHSAV----PTWEMFAGTVDYLDQRLK 259 (259)
T ss_dssp EEEESSCTTCC----CHHHHTHHHHHHHHHHCC
T ss_pred EEEeCCCCCCc----CHHHHHHHHHHHHHHhcC
Confidence 88898744433 345778999999999997
No 16
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=1e-22 Score=221.03 Aligned_cols=266 Identities=17% Similarity=0.198 Sum_probs=198.2
Q ss_pred CcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-
Q 004149 52 NGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW- 130 (771)
Q Consensus 52 dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~- 130 (771)
.+.+++|...... +...+.|++++++ +...+.++... ..+..++|||||++|||.+... +...++..+
T Consensus 142 ~~~~l~~~s~~~~---~~~~~~i~i~d~~--g~~~~~l~~~~-----~~v~~~~~Spdg~~la~~s~~~-~~~~i~~~d~ 210 (415)
T 2hqs_A 142 FRTRIAYVVQTNG---GQFPYELRVSDYD--GYNQFVVHRSP-----QPLMSPAWSPDGSKLAYVTFES-GRSALVIQTL 210 (415)
T ss_dssp TTCEEEEEEECSS---SSCCEEEEEEETT--SCSCEEEEEES-----SCEEEEEECTTSSEEEEEECTT-SSCEEEEEET
T ss_pred CCCEEEEEEecCC---CCccceEEEEcCC--CCCCEEEeCCC-----CcceeeEEcCCCCEEEEEEecC-CCcEEEEEEC
Confidence 3667787765421 1223788888874 34556665543 5688999999999999998654 445666666
Q ss_pred cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCc
Q 004149 131 SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGE 210 (771)
Q Consensus 131 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~ 210 (771)
.+++.+++....... ..++|||||++|+|.+...
T Consensus 211 ~tg~~~~l~~~~~~~----------~~~~~spdg~~la~~~~~~------------------------------------ 244 (415)
T 2hqs_A 211 ANGAVRQVASFPRHN----------GAPAFSPDGSKLAFALSKT------------------------------------ 244 (415)
T ss_dssp TTCCEEEEECCSSCE----------EEEEECTTSSEEEEEECTT------------------------------------
T ss_pred CCCcEEEeecCCCcc----------cCEEEcCCCCEEEEEEecC------------------------------------
Confidence 555555554433222 5899999999999975432
Q ss_pred ccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccc
Q 004149 211 TYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLY 290 (771)
Q Consensus 211 ~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~ 290 (771)
+...||+||+.+++.+.+ +.....+..+.|||||+. |+|.+... ...+||.+|+
T Consensus 245 -----g~~~i~~~d~~~~~~~~l--~~~~~~~~~~~~spdg~~----l~~~s~~~------------g~~~i~~~d~--- 298 (415)
T 2hqs_A 245 -----GSLNLYVMDLASGQIRQV--TDGRSNNTEPTWFPDSQN----LAFTSDQA------------GRPQVYKVNI--- 298 (415)
T ss_dssp -----SSCEEEEEETTTCCEEEC--CCCSSCEEEEEECTTSSE----EEEEECTT------------SSCEEEEEET---
T ss_pred -----CCceEEEEECCCCCEEeC--cCCCCcccceEECCCCCE----EEEEECCC------------CCcEEEEEEC---
Confidence 346899999999999888 555556788999999999 99987422 2238999998
Q ss_pred cchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceee
Q 004149 291 KSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVD 370 (771)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~ 370 (771)
.+++.++++.....+..++|||||++|++.+.+. | ...|+++|+.+++.+.++...
T Consensus 299 --------------~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~----g----~~~i~~~d~~~~~~~~l~~~~-- 354 (415)
T 2hqs_A 299 --------------NGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNG----G----QQHIAKQDLATGGVQVLSSTF-- 354 (415)
T ss_dssp --------------TSSCCEECCCSSSEEEEEEECTTSSEEEEEEECS----S----CEEEEEEETTTCCEEECCCSS--
T ss_pred --------------CCCCEEEEecCCCcccCeEECCCCCEEEEEECcC----C----ceEEEEEECCCCCEEEecCCC--
Confidence 7777888887777788999999999999998764 1 467999999887654332211
Q ss_pred EEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeec
Q 004149 371 VIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLD 443 (771)
Q Consensus 371 ~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d 443 (771)
....++|+|||+.|++.+...+...||.+|++++..++|+...+.+..+.|+|.
T Consensus 355 -------------------~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 355 -------------------LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp -------------------SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCC
T ss_pred -------------------CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCccccc
Confidence 134678999999999988888888999999998889999887776777888874
No 17
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=99.92 E-value=7.7e-24 Score=216.70 Aligned_cols=230 Identities=17% Similarity=0.189 Sum_probs=170.3
Q ss_pred ccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCc
Q 004149 514 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 592 (771)
Q Consensus 514 ~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~ 592 (771)
...+|..+.+++..|......++.|+||++||+++... ...+...+..|+++||.|+++|+||.+.... ...
T Consensus 20 ~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~-------~~~ 92 (276)
T 3hxk_A 20 SLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTN-------YNF 92 (276)
T ss_dssp CCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCC-------SCT
T ss_pred cCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCC-------CCc
Confidence 34567788876665543223377899999999774432 3456678889999999999999999654211 011
Q ss_pred cccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHHh-CCCceeEEEecCCccchhhhhcCCCCCcchhh
Q 004149 593 GSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPLCNLALMVGTTDIPDWCYV 668 (771)
Q Consensus 593 ~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~-~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~ 668 (771)
.....+|+.++++++.++. .+++++|+|+|||+||.+++.++.+ .+.+++++|+.+|+.++........ .
T Consensus 93 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~~~~--~---- 166 (276)
T 3hxk_A 93 LSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWPSDL--S---- 166 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCSSSS--S----
T ss_pred CchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCCcch--h----
Confidence 2245789999999998864 3688999999999999999999988 7889999999999876543211110 0
Q ss_pred hhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCcc
Q 004149 669 ESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHG 748 (771)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 748 (771)
...+. . .. . ...++...+.++++|+|++||++|..+|++++..+++.+++.+.+++++++++++|+
T Consensus 167 -------~~~~~--~--~~--~-~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H~ 232 (276)
T 3hxk_A 167 -------HFNFE--I--EN--I-SEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPHG 232 (276)
T ss_dssp -------SSCCC--C--SC--C-GGGBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCTT
T ss_pred -------hhhcC--c--hh--h-hhCChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCCC
Confidence 01111 0 11 1 445677778888999999999999999999999999999999999999999999998
Q ss_pred CCCCCC------------hHHHHHHHHHHHHHHh
Q 004149 749 IERPQS------------DFESFLNIGLWFKKYC 770 (771)
Q Consensus 749 ~~~~~~------------~~~~~~~i~~wl~~~l 770 (771)
+..... ..+++..+.+||+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~ 266 (276)
T 3hxk_A 233 VSLANRTTAPSDAYCLPSVHRWVSWASDWLERQI 266 (276)
T ss_dssp CTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHH
T ss_pred ccccCccccccccccCchHHHHHHHHHHHHHhCc
Confidence 875332 3568888999999875
No 18
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=99.91 E-value=1.3e-23 Score=210.17 Aligned_cols=214 Identities=17% Similarity=0.216 Sum_probs=162.6
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhh-------cCC
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ-------SLP 589 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~-------~~~ 589 (771)
+|.++.++++.|++ ..++.|+||++||.... ...+...+..|+++||.|+++|++|.++....+.. ...
T Consensus 14 ~~~~~~~~~~~p~~--~~~~~p~vv~~HG~~g~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~ 89 (241)
T 3f67_A 14 QGENMPAYHARPKN--ADGPLPIVIVVQEIFGV--HEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDIPTLFKELVS 89 (241)
T ss_dssp TTEEEEEEEEEETT--CCSCEEEEEEECCTTCS--CHHHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSHHHHHHHTGG
T ss_pred CCcceEEEEecCCC--CCCCCCEEEEEcCcCcc--CHHHHHHHHHHHHCCcEEEEecccccCCCCCchhhHHHHHHHhhh
Confidence 67889999999984 33568999999996544 34677788899999999999999986554332110 000
Q ss_pred CCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhh
Q 004149 590 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 669 (771)
Q Consensus 590 ~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~ 669 (771)
........+|+.++++++.+++ +|.++|+|+|||+||.+++.++.++|+ ++++++..+..... .
T Consensus 90 ~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~-------~------- 153 (241)
T 3f67_A 90 KVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGE-------K------- 153 (241)
T ss_dssp GSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCC-------C-------
T ss_pred cCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCC-------C-------
Confidence 0111234789999999998886 788999999999999999999999887 66666655432100 0
Q ss_pred hccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccC
Q 004149 670 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 749 (771)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 749 (771)
..+...+|...+.++++|+|+++|++|..+|++++..+++.+++.+.+++++++++++|++
T Consensus 154 -------------------~~~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 214 (241)
T 3f67_A 154 -------------------SLNSPKHPVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAF 214 (241)
T ss_dssp -------------------CSSSCCCHHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTT
T ss_pred -------------------ccCCccCHHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcce
Confidence 0112234556677889999999999999999999999999999999999999999999988
Q ss_pred CCC-------CChHHHHHHHHHHHHHH
Q 004149 750 ERP-------QSDFESFLNIGLWFKKY 769 (771)
Q Consensus 750 ~~~-------~~~~~~~~~i~~wl~~~ 769 (771)
... ....+.++.+++||++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~fl~~~ 241 (241)
T 3f67_A 215 NADYRASYHEESAKDGWQRMLAWFAQY 241 (241)
T ss_dssp TCTTSTTCCHHHHHHHHHHHHHHHTTC
T ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhhC
Confidence 632 22356788999999764
No 19
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=99.91 E-value=2.2e-23 Score=210.08 Aligned_cols=242 Identities=13% Similarity=0.147 Sum_probs=162.1
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcccc
Q 004149 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 595 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~ 595 (771)
.+|.+++++++.|++ ..++.|+||++||.+.......|...+..|+++||.|+++|+||.+.+..... . .....
T Consensus 8 ~~g~~l~~~~~~p~~--~~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~---~-~~~~~ 81 (251)
T 2wtm_A 8 CDGIKLNAYLDMPKN--NPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKFE---D-HTLFK 81 (251)
T ss_dssp ETTEEEEEEEECCTT--CCSSEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGG---G-CCHHH
T ss_pred cCCcEEEEEEEccCC--CCCCCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCccc---c-CCHHH
Confidence 367889999998873 13467899999997665324467778889999999999999999544322110 0 01122
Q ss_pred chhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCC
Q 004149 596 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKG 675 (771)
Q Consensus 596 ~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (771)
..+|+.++++++.+...+ ++++|+||||||.+++.++.++|++++++|+.+|.................+........
T Consensus 82 ~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T 2wtm_A 82 WLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDPENIPDE 159 (251)
T ss_dssp HHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHHHHHTEETTEECBTTBCCSE
T ss_pred HHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHHHhhhhhccccCCchhcchH
Confidence 367888888888655323 589999999999999999999999999999999975432211000000000000000000
Q ss_pred CCcCCCCC-ChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCC
Q 004149 676 KDSFTESP-SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQS 754 (771)
Q Consensus 676 ~~~~~~~~-~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 754 (771)
...+.... ...........++...+.++++|+|+++|++|..+|++.++.+++.+. +++++++++++|.+ .+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~----~~~~~~~~~~gH~~--~~~ 233 (251)
T 2wtm_A 160 LDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYK----NCKLVTIPGDTHCY--DHH 233 (251)
T ss_dssp EEETTTEEEETHHHHHHTTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHSS----SEEEEEETTCCTTC--TTT
T ss_pred HhhhhccccchHHHHHHHccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhCC----CcEEEEECCCCccc--chh
Confidence 00000000 001112222334445567889999999999999999999888877763 48999999999998 566
Q ss_pred hHHHHHHHHHHHHHHhC
Q 004149 755 DFESFLNIGLWFKKYCK 771 (771)
Q Consensus 755 ~~~~~~~i~~wl~~~l~ 771 (771)
..++.+.+.+||+++++
T Consensus 234 ~~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 234 LELVTEAVKEFMLEQIA 250 (251)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 67899999999998874
No 20
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=99.90 E-value=1.2e-22 Score=207.87 Aligned_cols=224 Identities=17% Similarity=0.209 Sum_probs=162.4
Q ss_pred CCCceEEEEEEecCCC---CCCCCCcEEEEEcCCCCCC-CCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCC
Q 004149 516 GAQKPFEAIFVSSSHK---KDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 591 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~---~~~~~~p~vv~~HGg~~~~-~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~ 591 (771)
.+|.++.+.+|.|+.. ...++.|+||++|||++.. ....|...+..|+++||.|+++||||.+..+ .
T Consensus 11 ~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~--------~- 81 (277)
T 3bxp_A 11 TAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQ--------S- 81 (277)
T ss_dssp STTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTC--------C-
T ss_pred cCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCC--------c-
Confidence 3566788889999731 2456789999999976433 2345677888999999999999999944211 1
Q ss_pred ccccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHHhC--------------CCceeEEEecCCccchh
Q 004149 592 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--------------PDKFVAAAARNPLCNLA 654 (771)
Q Consensus 592 ~~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~--------------p~~~~a~v~~~p~~~~~ 654 (771)
......+|+.++++++.+.. .+++++|+|+|||+||.+++.++.++ +.+++++|+.+|+.+..
T Consensus 82 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~ 161 (277)
T 3bxp_A 82 VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLT 161 (277)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTT
T ss_pred cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCC
Confidence 12245789999999988752 26778999999999999999999885 67899999999987643
Q ss_pred hhhcCCCCCcchhhh-hccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhC
Q 004149 655 LMVGTTDIPDWCYVE-SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREK 733 (771)
Q Consensus 655 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~ 733 (771)
.... ...... .+ .......+|...+.++.+|+|++||++|.++|+++++.+++.+++.
T Consensus 162 ~~~~-----~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~ 220 (277)
T 3bxp_A 162 AGFP-----TTSAARNQI----------------TTDARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQH 220 (277)
T ss_dssp SSSS-----SSHHHHHHH----------------CSCGGGSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHT
T ss_pred CCCC-----Cccccchhc----------------cchhhhcCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHHHC
Confidence 2100 000000 00 0022345666777788899999999999999999999999999999
Q ss_pred CCCEEEEEeCCCCccCCCCCC--------------hHHHHHHHHHHHHHH
Q 004149 734 GVETKVIVFPNDVHGIERPQS--------------DFESFLNIGLWFKKY 769 (771)
Q Consensus 734 g~~~~~~~~~~~~H~~~~~~~--------------~~~~~~~i~~wl~~~ 769 (771)
+.+++++++++++|.+..... ..++++.+.+||+++
T Consensus 221 ~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 270 (277)
T 3bxp_A 221 QVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQ 270 (277)
T ss_dssp TCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhc
Confidence 999999999999997654322 357789999999876
No 21
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=99.90 E-value=1.1e-22 Score=221.25 Aligned_cols=234 Identities=16% Similarity=0.177 Sum_probs=164.2
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhh
Q 004149 520 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVND 599 (771)
Q Consensus 520 ~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D 599 (771)
.+.++++.|+ +.++.|+||++||++.. .+...+..|+++||.|+++|+||.++. +........+|
T Consensus 144 ~l~~~l~~P~---~~~~~P~Vv~~hG~~~~----~~~~~a~~La~~Gy~V~a~D~rG~g~~--------~~~~~~~~~~d 208 (422)
T 3k2i_A 144 RVRATLFLPP---GPGPFPGIIDIFGIGGG----LLEYRASLLAGHGFATLALAYYNFEDL--------PNNMDNISLEY 208 (422)
T ss_dssp TEEEEEEECS---SSCCBCEEEEECCTTCS----CCCHHHHHHHTTTCEEEEEECSSSTTS--------CSSCSCEETHH
T ss_pred cEEEEEEcCC---CCCCcCEEEEEcCCCcc----hhHHHHHHHHhCCCEEEEEccCCCCCC--------CCCcccCCHHH
Confidence 5899999997 45678999999997654 234568889999999999999995543 22233356899
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhh---cCCCCCcchhh-h--hccC
Q 004149 600 VLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV---GTTDIPDWCYV-E--SYGS 673 (771)
Q Consensus 600 ~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~---~~~~~~~~~~~-~--~~~~ 673 (771)
+.++++++.++..++.++|+|+||||||.+++.++.++|+ ++++|+.+|........ .....+..... . ....
T Consensus 209 ~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (422)
T 3k2i_A 209 FEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAF 287 (422)
T ss_dssp HHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECCCCBCGGGCEECT
T ss_pred HHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCCcccchhhcccCc
Confidence 9999999999887888999999999999999999999998 89999988875321100 00000000000 0 0000
Q ss_pred CCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHH-HHHHHHHHhCCCC-EEEEEeCCCCccCCC
Q 004149 674 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNG-LQYARALREKGVE-TKVIVFPNDVHGIER 751 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~-~~~~~~l~~~g~~-~~~~~~~~~~H~~~~ 751 (771)
.....+.. ...........+....+.++++|+|+++|++|.++|.+.. +.+.+.|++.+.+ +++++|++++|.+..
T Consensus 288 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~~gagH~~~~ 365 (422)
T 3k2i_A 288 SGLVDIVD--IRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYIEP 365 (422)
T ss_dssp TSCEECTT--CBCCCTTGGGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEEETTCCSCCCS
T ss_pred chhHHHHH--HHhhhhhcccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEECCCCCEECC
Confidence 00000000 0000001112233345678899999999999999998866 6899999999988 999999999999832
Q ss_pred C---------------------------CChHHHHHHHHHHHHHHhC
Q 004149 752 P---------------------------QSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 752 ~---------------------------~~~~~~~~~i~~wl~~~l~ 771 (771)
+ +...+.++.+++||+++|+
T Consensus 366 p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~ 412 (422)
T 3k2i_A 366 PYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLG 412 (422)
T ss_dssp TTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 2 3466789999999999984
No 22
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=99.90 E-value=1.6e-22 Score=217.66 Aligned_cols=229 Identities=14% Similarity=0.097 Sum_probs=168.1
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|.++.++++.|++ .++.|+||++||++... ..+......|+++||.|+++|+||. |.+.. ........
T Consensus 135 dg~~i~~~l~~p~~---~~~~P~vl~~hG~~~~~--~~~~~~~~~l~~~G~~v~~~d~rG~---G~s~~---~~~~~~~~ 203 (386)
T 2jbw_A 135 DGIPMPVYVRIPEG---PGPHPAVIMLGGLESTK--EESFQMENLVLDRGMATATFDGPGQ---GEMFE---YKRIAGDY 203 (386)
T ss_dssp TTEEEEEEEECCSS---SCCEEEEEEECCSSCCT--TTTHHHHHHHHHTTCEEEEECCTTS---GGGTT---TCCSCSCH
T ss_pred CCEEEEEEEEcCCC---CCCCCEEEEeCCCCccH--HHHHHHHHHHHhCCCEEEEECCCCC---CCCCC---CCCCCccH
Confidence 68899999999984 36789999999876542 2344457888999999999999994 44311 11111222
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCC
Q 004149 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 676 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (771)
.+++.++++++.+++.++.++|+|+|+|+||++++.++.+ |++++++|+. |+.++...... .+.. ..... .
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~~--~~~~-~~~~~----~ 274 (386)
T 2jbw_A 204 EKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWDL--ETPL-TKESW----K 274 (386)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGGG--SCHH-HHHHH----H
T ss_pred HHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHHh--ccHH-HHHHH----H
Confidence 3568888999999877888999999999999999999998 8899999999 98775433220 0000 00000 0
Q ss_pred CcCCCCCChhhH-HHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHH-HhCCCCEEEEEeCCCCccCCCCCC
Q 004149 677 DSFTESPSVEDL-TRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARAL-REKGVETKVIVFPNDVHGIERPQS 754 (771)
Q Consensus 677 ~~~~~~~~~~~~-~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l-~~~g~~~~~~~~~~~~H~~~~~~~ 754 (771)
..+......+.. ..+...++...+.++++|+|+++|++|. +|+++++++++.+ +. +++++++++++|.+ ...
T Consensus 275 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~---~~~~~~~~~~gH~~--~~~ 348 (386)
T 2jbw_A 275 YVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAE---HLNLVVEKDGDHCC--HNL 348 (386)
T ss_dssp HHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGG---GEEEEEETTCCGGG--GGG
T ss_pred HHhCCCCHHHHHHHHHHhCChhhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHhcCC---CcEEEEeCCCCcCC--ccc
Confidence 001111112333 4556778888889999999999999999 9999999999988 64 58999999999976 334
Q ss_pred hHHHHHHHHHHHHHHhC
Q 004149 755 DFESFLNIGLWFKKYCK 771 (771)
Q Consensus 755 ~~~~~~~i~~wl~~~l~ 771 (771)
..++++.+.+||+++|+
T Consensus 349 ~~~~~~~i~~fl~~~l~ 365 (386)
T 2jbw_A 349 GIRPRLEMADWLYDVLV 365 (386)
T ss_dssp TTHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHhcC
Confidence 55789999999999874
No 23
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=99.89 E-value=1.9e-22 Score=216.20 Aligned_cols=216 Identities=16% Similarity=0.162 Sum_probs=168.5
Q ss_pred ccccC-CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcch----------HHHHHHHHCCcEEEEECCCCCCCC
Q 004149 512 NLTKG-AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS----------KSLAFLSSVGYSLLIVNYRGSLGF 580 (771)
Q Consensus 512 ~~~~~-~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~----------~~~~~la~~G~~V~~~d~rG~~~~ 580 (771)
.+.+. +|..+.+++|.|+++.+.+++|+||++||+++........ ....+....|+.|+++|+||.+++
T Consensus 148 ~~~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~~ 227 (380)
T 3doh_A 148 TFKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSW 227 (380)
T ss_dssp EEECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCCS
T ss_pred eeccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCcc
Confidence 44555 7889999999999766678899999999987543221111 012234577899999999998888
Q ss_pred ChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCC
Q 004149 581 GEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT 660 (771)
Q Consensus 581 g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~ 660 (771)
+..|.............+|+.++++++.++..+|++||+|+|||+||++++.++.++|++++++++.+|..+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~~------- 300 (380)
T 3doh_A 228 STLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDV------- 300 (380)
T ss_dssp BTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCG-------
T ss_pred cccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCCh-------
Confidence 7776543333444556889999999999987788899999999999999999999999999999999887410
Q ss_pred CCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCC-CCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEE
Q 004149 661 DIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV-KTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKV 739 (771)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i-~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~ 739 (771)
..+..+ .+|+|++||+.|..+|++++++++++|++.|.++++
T Consensus 301 -------------------------------------~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~ 343 (380)
T 3doh_A 301 -------------------------------------SKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRY 343 (380)
T ss_dssp -------------------------------------GGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEE
T ss_pred -------------------------------------hhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCceEE
Confidence 111223 389999999999999999999999999999999999
Q ss_pred EEeCCC---CccCCCCCChHHHHH--HHHHHHHHHhC
Q 004149 740 IVFPND---VHGIERPQSDFESFL--NIGLWFKKYCK 771 (771)
Q Consensus 740 ~~~~~~---~H~~~~~~~~~~~~~--~i~~wl~~~l~ 771 (771)
++++++ +|++.........+. .+.+||.++.+
T Consensus 344 ~~~~~~~h~~h~~~~H~~~~~~~~~~~i~~wL~~~~r 380 (380)
T 3doh_A 344 TEYEKGFMEKHGWDPHGSWIPTYENQEAIEWLFEQSR 380 (380)
T ss_dssp EEECTTHHHHTTCCTTCTHHHHHTCHHHHHHHHTCC-
T ss_pred EEecCCcccCCCCCCchhHHHhcCCHHHHHHHHhhcC
Confidence 999999 555444444556666 89999987653
No 24
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=99.89 E-value=1.3e-22 Score=215.52 Aligned_cols=237 Identities=19% Similarity=0.227 Sum_probs=159.7
Q ss_pred cccCCCceEEEEEEe-cCCC--------------------CCCCCCcEEEEEcCCCCCCCCCc---chHHHHHHHHC-Cc
Q 004149 513 LTKGAQKPFEAIFVS-SSHK--------------------KDCSCDPLIVVLHGGPHSVSLSS---YSKSLAFLSSV-GY 567 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~-P~~~--------------------~~~~~~p~vv~~HGg~~~~~~~~---~~~~~~~la~~-G~ 567 (771)
+...+| +.+.+|. |+.. ...++.|+||++|||++...... |...+..|+++ ||
T Consensus 69 ~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~ 146 (365)
T 3ebl_A 69 IDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKG 146 (365)
T ss_dssp EETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTS
T ss_pred ecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHHHHHHHHHCCC
Confidence 344556 6677887 8642 23467899999999887543332 45677788775 99
Q ss_pred EEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcC----CCCCC-eEEEEEcChhHHHHHHHHHhCCC---
Q 004149 568 SLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG----LANPS-KVTVVGGSHGGFLTTHLIGQAPD--- 639 (771)
Q Consensus 568 ~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~----~~d~~-ri~l~G~S~GG~~a~~~a~~~p~--- 639 (771)
.|+++|||+++++ .....++|+.++++|+.++. .+|++ ||+|+|+|+||++|+.++.+.++
T Consensus 147 ~Vv~~dyR~~p~~-----------~~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~~~ 215 (365)
T 3ebl_A 147 VVVSVNYRRAPEH-----------RYPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEGV 215 (365)
T ss_dssp EEEEECCCCTTTS-----------CTTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHHHTTC
T ss_pred EEEEeeCCCCCCC-----------CCcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHHhcCC
Confidence 9999999986543 12345799999999999764 47898 99999999999999999987655
Q ss_pred ceeEEEecCCccchhhhhcC------CCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccc-cccCCC----CcEE
Q 004149 640 KFVAAAARNPLCNLALMVGT------TDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPIS-HISKVK----TPTI 708 (771)
Q Consensus 640 ~~~a~v~~~p~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~-~~~~i~----~P~L 708 (771)
.++++|+.+|+++....... ...........+. ..+..... .......+|+. ....++ +|+|
T Consensus 216 ~~~g~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~p~~~~~~~l~~~~~pP~L 288 (365)
T 3ebl_A 216 KVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYW----KAYLPEDA---DRDHPACNPFGPNGRRLGGLPFAKSL 288 (365)
T ss_dssp CCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHH----HHHSCTTC---CTTSTTTCTTSTTCCCCTTSCCCCEE
T ss_pred ceeeEEEEccccCCCcCChhhhhcCCCcccCHHHHHHHH----HHhCCCCC---CCCCcccCCCCCcchhhccCCCCCEE
Confidence 79999999998764311000 0000000000000 00000000 00011122332 223333 6899
Q ss_pred EEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCC---CCCChHHHHHHHHHHHHHHhC
Q 004149 709 FLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE---RPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 709 ii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~---~~~~~~~~~~~i~~wl~~~l~ 771 (771)
|+||+.|..+ .++.+++++|++.|++++++++++++|++. ..+...++++.+.+||+++++
T Consensus 289 i~~G~~D~l~--~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~ 352 (365)
T 3ebl_A 289 IIVSGLDLTC--DRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLY 352 (365)
T ss_dssp EEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC
T ss_pred EEEcCcccch--hHHHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhh
Confidence 9999999776 567899999999999999999999999876 234456789999999999875
No 25
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=99.89 E-value=1.7e-22 Score=220.80 Aligned_cols=234 Identities=14% Similarity=0.170 Sum_probs=161.8
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhh
Q 004149 520 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVND 599 (771)
Q Consensus 520 ~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D 599 (771)
.+.+++|.|+ +.++.|+||++||++.. .+...+..|+++||.|+++||||.++.+ ........+|
T Consensus 160 ~l~~~l~~P~---~~~~~P~Vv~lhG~~~~----~~~~~a~~La~~Gy~Vla~D~rG~~~~~--------~~~~~~~~~d 224 (446)
T 3hlk_A 160 RVRGTLFLPP---EPGPFPGIVDMFGTGGG----LLEYRASLLAGKGFAVMALAYYNYEDLP--------KTMETLHLEY 224 (446)
T ss_dssp TEEEEEEECS---SSCCBCEEEEECCSSCS----CCCHHHHHHHTTTCEEEEECCSSSTTSC--------SCCSEEEHHH
T ss_pred eEEEEEEeCC---CCCCCCEEEEECCCCcc----hhhHHHHHHHhCCCEEEEeccCCCCCCC--------cchhhCCHHH
Confidence 5899999997 45678999999997654 2334588999999999999999955432 2233345899
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhh---cCCCCCcchh-hhh--ccC
Q 004149 600 VLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV---GTTDIPDWCY-VES--YGS 673 (771)
Q Consensus 600 ~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~---~~~~~~~~~~-~~~--~~~ 673 (771)
+.++++++.++..++.++|+|+||||||.+++.++.++|+ ++++|+.+|........ .....+...+ ... ...
T Consensus 225 ~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (446)
T 3hlk_A 225 FEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVTK 303 (446)
T ss_dssp HHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECCCCBCGGGCEECS
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCccccchhcccccc
Confidence 9999999999887888999999999999999999999988 89999888865321100 0000000000 000 000
Q ss_pred CCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHH-HHHHHHHHhCCCC-EEEEEeCCCCccCCC
Q 004149 674 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNG-LQYARALREKGVE-TKVIVFPNDVHGIER 751 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~-~~~~~~l~~~g~~-~~~~~~~~~~H~~~~ 751 (771)
.....+... ...............+.++++|+|+++|++|.++|+.+. ..+++.|++.+.+ +++++||+++|.+..
T Consensus 304 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~pgagH~~~~ 381 (446)
T 3hlk_A 304 DGYADIVDV--LNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYIEP 381 (446)
T ss_dssp SSCEECTTC--BCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEEETTBCSCCCS
T ss_pred chHHHHHHH--HhchhhccccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEEECCCCCeECC
Confidence 000000000 000000111122234677889999999999999998554 7899999999988 899999999999831
Q ss_pred ---------------------------CCChHHHHHHHHHHHHHHhC
Q 004149 752 ---------------------------PQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 752 ---------------------------~~~~~~~~~~i~~wl~~~l~ 771 (771)
.+...+.++.+++||+++|+
T Consensus 382 p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~ 428 (446)
T 3hlk_A 382 PYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLG 428 (446)
T ss_dssp TTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhC
Confidence 11256789999999999984
No 26
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=99.89 E-value=1.6e-22 Score=213.40 Aligned_cols=242 Identities=14% Similarity=0.169 Sum_probs=169.3
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcC-C-
Q 004149 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL-P- 589 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~-~- 589 (771)
.+...+|.++.++++.|++. .++.|+||++||++... .+......|+++||.|+++|+||.++++....... +
T Consensus 72 ~~~~~dg~~i~~~~~~P~~~--~~~~p~vv~~HG~g~~~---~~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~p~ 146 (337)
T 1vlq_A 72 TFSGYRGQRIKGWLLVPKLE--EEKLPCVVQYIGYNGGR---GFPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPE 146 (337)
T ss_dssp EEECGGGCEEEEEEEEECCS--CSSEEEEEECCCTTCCC---CCGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCS
T ss_pred EEEcCCCCEEEEEEEecCCC--CCCccEEEEEcCCCCCC---CCchhhcchhhCCCEEEEecCCCCCCcccCCCCccccc
Confidence 34445688999999999842 56789999999977653 23334457788999999999999775432100000 0
Q ss_pred ----CCc---------------cccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCc
Q 004149 590 ----GKV---------------GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 650 (771)
Q Consensus 590 ----~~~---------------~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~ 650 (771)
..+ ....++|+.++++++.+++.+|.++|+|+|+|+||.+++.++.++| .++++|+.+|.
T Consensus 147 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~vl~~p~ 225 (337)
T 1vlq_A 147 GPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPF 225 (337)
T ss_dssp SSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCC
T ss_pred ccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEEECCCc
Confidence 000 0134789999999999987788899999999999999999999988 58899988885
Q ss_pred cc-hhhhhcCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHH
Q 004149 651 CN-LALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARA 729 (771)
Q Consensus 651 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~ 729 (771)
.. +..+........+.....+.. . ...........+...+|...+.++++|+|+++|+.|.++|++++.+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~ 300 (337)
T 1vlq_A 226 LCHFRRAVQLVDTHPYAEITNFLK----T-HRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNY 300 (337)
T ss_dssp SCCHHHHHHHCCCTTHHHHHHHHH----H-CTTCHHHHHHHHHTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred ccCHHHHHhcCCCcchHHHHHHHH----h-CchhHHHHHHhhhhccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHh
Confidence 43 332221111111111110000 0 00001122233445677778889999999999999999999999999888
Q ss_pred HHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 730 LREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 730 l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
++. +++++++++++|.+. ..+..+.+.+||.++|+
T Consensus 301 l~~---~~~~~~~~~~gH~~~----~~~~~~~~~~fl~~~l~ 335 (337)
T 1vlq_A 301 YAG---PKEIRIYPYNNHEGG----GSFQAVEQVKFLKKLFE 335 (337)
T ss_dssp CCS---SEEEEEETTCCTTTT----HHHHHHHHHHHHHHHHC
T ss_pred cCC---CcEEEEcCCCCCCCc----chhhHHHHHHHHHHHHh
Confidence 764 589999999999863 34677899999999874
No 27
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=99.89 E-value=6.4e-23 Score=210.69 Aligned_cols=225 Identities=18% Similarity=0.179 Sum_probs=162.8
Q ss_pred cCCCceEEEEEEecCCC---CCCCCCcEEEEEcCCCCCCCC-CcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCC
Q 004149 515 KGAQKPFEAIFVSSSHK---KDCSCDPLIVVLHGGPHSVSL-SSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG 590 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~---~~~~~~p~vv~~HGg~~~~~~-~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~ 590 (771)
..+|..+...+| |+.. .+.++.|+||++||+++.... ..|...+..|+++||.|+++|+||.+.++
T Consensus 26 ~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~--------- 95 (283)
T 3bjr_A 26 KLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQQ--------- 95 (283)
T ss_dssp ECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTCS---------
T ss_pred ecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCccc---------
Confidence 334555666777 6632 144678999999997753322 34667888899999999999999965432
Q ss_pred CccccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHHhCCCc-------------eeEEEecCCccchh
Q 004149 591 KVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPDK-------------FVAAAARNPLCNLA 654 (771)
Q Consensus 591 ~~~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~p~~-------------~~a~v~~~p~~~~~ 654 (771)
........|+.++++++.+.. .+++++|+|+|||+||.+++.++.++|+. ++++++.+|..+..
T Consensus 96 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~ 175 (283)
T 3bjr_A 96 PLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPL 175 (283)
T ss_dssp SCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTT
T ss_pred cCchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccccc
Confidence 112234778999999988753 36778999999999999999999999987 89999999987532
Q ss_pred hhhcCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCC
Q 004149 655 LMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG 734 (771)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g 734 (771)
....... . ....+. ..+...++...+.++.+|+|+++|++|..+|++++..+++.+++.+
T Consensus 176 ~~~~~~~-------~-----~~~~~~--------~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g 235 (283)
T 3bjr_A 176 LGFPKDD-------A-----TLATWT--------PTPNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATALATAK 235 (283)
T ss_dssp SBC--------------------CCC--------CCGGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTT
T ss_pred ccccccc-------c-----hHHHHH--------HHhHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCC
Confidence 1100000 0 000000 0133456666778889999999999999999999999999999999
Q ss_pred CCEEEEEeCCCCccCCCCC------------ChHHHHHHHHHHHHHH
Q 004149 735 VETKVIVFPNDVHGIERPQ------------SDFESFLNIGLWFKKY 769 (771)
Q Consensus 735 ~~~~~~~~~~~~H~~~~~~------------~~~~~~~~i~~wl~~~ 769 (771)
.+++++++++++|.+.... ...++.+.+.+||+++
T Consensus 236 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 236 IPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp CCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred CCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 9999999999999765321 2247788999999864
No 28
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=99.89 E-value=1.9e-22 Score=205.35 Aligned_cols=240 Identities=10% Similarity=0.055 Sum_probs=164.4
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
..+|.+++++++.|. ..+.|+||++||++.......|...+..|+++||.|+++|+||.+....... .....
T Consensus 28 ~~~g~~l~~~~~~p~----~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~----~~~~~ 99 (270)
T 3pfb_A 28 ERDGLQLVGTREEPF----GEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFE----NMTVL 99 (270)
T ss_dssp EETTEEEEEEEEECS----SSSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGG----GCCHH
T ss_pred ccCCEEEEEEEEcCC----CCCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCCC----ccCHH
Confidence 447889999999886 2357999999997766434457778889999999999999999554432110 01112
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCC
Q 004149 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSK 674 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (771)
..++|+.++++++.++. +.++++|+|||+||.+++.++.++|++++++|+.+|.................+.......
T Consensus 100 ~~~~d~~~~i~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (270)
T 3pfb_A 100 NEIEDANAILNYVKTDP--HVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHIPD 177 (270)
T ss_dssp HHHHHHHHHHHHHHTCT--TEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHTEETTEECCTTSCCS
T ss_pred HHHHhHHHHHHHHHhCc--CCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhhhhhccccCcccccc
Confidence 33678889999988763 3469999999999999999999999999999999998765432111000000000000000
Q ss_pred CCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCC
Q 004149 675 GKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQS 754 (771)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 754 (771)
................+...+....+.++++|+|+++|++|.++|++.+..+.+.+. +++++++++++|.+. .+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~~~ 252 (270)
T 3pfb_A 178 RLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQ----NSTLHLIEGADHCFS-DSY 252 (270)
T ss_dssp EEEETTEEEEHHHHHHHHHCCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCS----SEEEEEETTCCTTCC-THH
T ss_pred cccccccccchhHhhcccccCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhCC----CCeEEEcCCCCcccC-ccc
Confidence 000000000111223334445566788899999999999999999999888877754 489999999999876 444
Q ss_pred hHHHHHHHHHHHHHH
Q 004149 755 DFESFLNIGLWFKKY 769 (771)
Q Consensus 755 ~~~~~~~i~~wl~~~ 769 (771)
..++.+.+.+||+++
T Consensus 253 ~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 253 QKNAVNLTTDFLQNN 267 (270)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred hHHHHHHHHHHHhhc
Confidence 567888999998765
No 29
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=99.89 E-value=5e-22 Score=195.78 Aligned_cols=201 Identities=20% Similarity=0.244 Sum_probs=156.3
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCC---CCcc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP---GKVG 593 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~---~~~~ 593 (771)
+|.++.++++.|++ +.|+||++||++.......+...+..|+++||.|+++|+|| +|.+...... ....
T Consensus 20 ~g~~l~~~~~~p~~-----~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g---~g~s~~~~~~~~~~~~~ 91 (223)
T 2o2g_A 20 GEVKLKGNLVIPNG-----ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLT---QEEEEIDLRTRHLRFDI 91 (223)
T ss_dssp TTEEEEEEEECCTT-----CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSC---HHHHHHHHHHCSSTTCH
T ss_pred CCeEEEEEEecCCC-----CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCC---cCCCCccchhhcccCcH
Confidence 67899999999862 57999999997765433244567888999999999999998 5544322111 0111
Q ss_pred ccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccC
Q 004149 594 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGS 673 (771)
Q Consensus 594 ~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 673 (771)
....+|+.++++++..+..++.++++++|||+||.+++.++.++|++++++|+.+|..+..
T Consensus 92 ~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~------------------- 152 (223)
T 2o2g_A 92 GLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLA------------------- 152 (223)
T ss_dssp HHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGC-------------------
T ss_pred HHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcC-------------------
Confidence 2236788999999998877888999999999999999999999999999999998864310
Q ss_pred CCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCC
Q 004149 674 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQ 753 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~ 753 (771)
...+.++++|+|+++|++|..+|.. ..+.+.+.+.+++++++++++|.+..++
T Consensus 153 -----------------------~~~~~~~~~P~l~i~g~~D~~~~~~----~~~~~~~~~~~~~~~~~~~~~H~~~~~~ 205 (223)
T 2o2g_A 153 -----------------------PSALPHVKAPTLLIVGGYDLPVIAM----NEDALEQLQTSKRLVIIPRASHLFEEPG 205 (223)
T ss_dssp -----------------------TTTGGGCCSCEEEEEETTCHHHHHH----HHHHHHHCCSSEEEEEETTCCTTCCSTT
T ss_pred -----------------------HHHHhcCCCCEEEEEccccCCCCHH----HHHHHHhhCCCeEEEEeCCCCcccCChH
Confidence 0234557799999999999999633 2345556667899999999999987666
Q ss_pred ChHHHHHHHHHHHHHHhC
Q 004149 754 SDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 754 ~~~~~~~~i~~wl~~~l~ 771 (771)
...++.+.+.+||+++|+
T Consensus 206 ~~~~~~~~i~~fl~~~l~ 223 (223)
T 2o2g_A 206 ALTAVAQLASEWFMHYLR 223 (223)
T ss_dssp HHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 667899999999999986
No 30
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=99.89 E-value=2.7e-21 Score=194.48 Aligned_cols=202 Identities=17% Similarity=0.215 Sum_probs=157.6
Q ss_pred ccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC---CCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCC
Q 004149 514 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV---SLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG 590 (771)
Q Consensus 514 ~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~---~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~ 590 (771)
...+| ++.++++.|. .++.|+||++||.+... ....+...+..|+++||.|+++|+||.+..... .
T Consensus 29 ~~~~g-~l~~~~~~p~----~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~------~ 97 (249)
T 2i3d_A 29 NGPAG-RLEGRYQPSK----EKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGE------F 97 (249)
T ss_dssp EETTE-EEEEEEECCS----STTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC------C
T ss_pred ECCCc-eEEEEEEcCC----CCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCC------C
Confidence 34455 8999988875 25679999999964322 112346678889999999999999995433221 1
Q ss_pred CccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhh
Q 004149 591 KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 670 (771)
Q Consensus 591 ~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~ 670 (771)
.......+|+.++++++.++. .+.++++|+|||+||.+++.++.++|+ ++++|+.+|..+...
T Consensus 98 ~~~~~~~~d~~~~i~~l~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--------------- 160 (249)
T 2i3d_A 98 DHGAGELSDAASALDWVQSLH-PDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD--------------- 160 (249)
T ss_dssp CSSHHHHHHHHHHHHHHHHHC-TTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC---------------
T ss_pred CCccchHHHHHHHHHHHHHhC-CCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh---------------
Confidence 122334689999999998875 477799999999999999999999998 999999988754110
Q ss_pred ccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHh-CCCCEEEEEeCCCCccC
Q 004149 671 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALRE-KGVETKVIVFPNDVHGI 749 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~-~g~~~~~~~~~~~~H~~ 749 (771)
...+.++++|+|+++|++|..+|++.++++++.+.. .+.+++++++++++|.+
T Consensus 161 --------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~ 214 (249)
T 2i3d_A 161 --------------------------FSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFF 214 (249)
T ss_dssp --------------------------CTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTC
T ss_pred --------------------------hhhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCccc
Confidence 122456789999999999999999999999999986 45579999999999988
Q ss_pred CCCCChHHHHHHHHHHHHHHhC
Q 004149 750 ERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 750 ~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
. ....++++.+.+||+++++
T Consensus 215 ~--~~~~~~~~~i~~fl~~~l~ 234 (249)
T 2i3d_A 215 N--GKVDELMGECEDYLDRRLN 234 (249)
T ss_dssp T--TCHHHHHHHHHHHHHHHHT
T ss_pred c--cCHHHHHHHHHHHHHHhcC
Confidence 6 4567889999999998863
No 31
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=99.88 E-value=2.2e-22 Score=206.23 Aligned_cols=223 Identities=17% Similarity=0.189 Sum_probs=148.5
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCC
Q 004149 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 614 (771)
+..+.||++||.+.+ ...|..+++.|+++||.|+++|+|| +|.+........ ....++|+.++++++.+.
T Consensus 49 G~~~~VlllHG~~~s--~~~~~~la~~La~~Gy~Via~Dl~G---hG~S~~~~~~~~-~~~~~~d~~~~~~~l~~~---- 118 (281)
T 4fbl_A 49 GSRIGVLVSHGFTGS--PQSMRFLAEGFARAGYTVATPRLTG---HGTTPAEMAAST-ASDWTADIVAAMRWLEER---- 118 (281)
T ss_dssp CSSEEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEECCCTT---SSSCHHHHHTCC-HHHHHHHHHHHHHHHHHH----
T ss_pred CCCceEEEECCCCCC--HHHHHHHHHHHHHCCCEEEEECCCC---CCCCCccccCCC-HHHHHHHHHHHHHHHHhC----
Confidence 345679999996554 4468889999999999999999999 444432211111 112367888888888765
Q ss_pred CCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhh-----hcCCCCCcch--hhhhccCCCCCcCCCC-CChh
Q 004149 615 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM-----VGTTDIPDWC--YVESYGSKGKDSFTES-PSVE 686 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~ 686 (771)
.++++|+||||||.+++.++.++|++++++|+.+|....... .......... ................ ....
T Consensus 119 ~~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (281)
T 4fbl_A 119 CDVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPVTPVP 198 (281)
T ss_dssp CSEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCCSEEEGG
T ss_pred CCeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhhccCchH
Confidence 368999999999999999999999999999999987643211 0000110000 0000000000000000 0001
Q ss_pred hHHHHhhc--CccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHH
Q 004149 687 DLTRFHSK--SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGL 764 (771)
Q Consensus 687 ~~~~~~~~--sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~ 764 (771)
....+... .....+.++++|+|+++|++|.++|++.++.+++.+.. .+++++++++++|.+.......++.+.|.+
T Consensus 199 ~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~--~~~~l~~~~~~gH~~~~e~~~e~v~~~i~~ 276 (281)
T 4fbl_A 199 AIKHLITIGAVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGS--TEKELLWLENSYHVATLDNDKELILERSLA 276 (281)
T ss_dssp GHHHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCC--SSEEEEEESSCCSCGGGSTTHHHHHHHHHH
T ss_pred HHHHHHHhhhhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCC--CCcEEEEECCCCCcCccccCHHHHHHHHHH
Confidence 11111100 11234678999999999999999999999999887753 468999999999987655556788999999
Q ss_pred HHHHH
Q 004149 765 WFKKY 769 (771)
Q Consensus 765 wl~~~ 769 (771)
||++|
T Consensus 277 FL~~H 281 (281)
T 4fbl_A 277 FIRKH 281 (281)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99986
No 32
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=99.88 E-value=4.1e-22 Score=198.49 Aligned_cols=209 Identities=18% Similarity=0.153 Sum_probs=158.7
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhc----
Q 004149 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQS---- 587 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~---- 587 (771)
++...+|.++.++++.|+ .++.|+||++||.+.. ...+...+..|+++||.|+++|+||.+..+......
T Consensus 7 ~~~~~~g~~l~~~~~~p~----~~~~p~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~ 80 (236)
T 1zi8_A 7 SIQSYDGHTFGALVGSPA----KAPAPVIVIAQDIFGV--NAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQ 80 (236)
T ss_dssp CEECTTSCEECEEEECCS----SCSEEEEEEECCTTBS--CHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHHH
T ss_pred EEecCCCCeEEEEEECCC----CCCCCEEEEEcCCCCC--CHHHHHHHHHHHhCCcEEEeccccccCCCcccccccchhh
Confidence 344567888999999886 3568999999997654 346777888999999999999999865443211000
Q ss_pred -------CCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCC
Q 004149 588 -------LPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT 660 (771)
Q Consensus 588 -------~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~ 660 (771)
..........+|+.++++++.++..++ ++++|+|||+||.+++.++.++| ++++++.+|....
T Consensus 81 ~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~------- 150 (236)
T 1zi8_A 81 REQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE------- 150 (236)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG-------
T ss_pred hhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc-------
Confidence 000011223678899999998775444 79999999999999999999988 8888877764210
Q ss_pred CCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEE
Q 004149 661 DIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVI 740 (771)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~ 740 (771)
++...+.++++|+|+++|++|..+|++.++.+++.+++.+ +++++
T Consensus 151 ----------------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~ 195 (236)
T 1zi8_A 151 ----------------------------------KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANP-LLQVH 195 (236)
T ss_dssp ----------------------------------GCGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCT-TEEEE
T ss_pred ----------------------------------cchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCC-CceEE
Confidence 1233456778999999999999999999999999997655 79999
Q ss_pred EeCCCCccCCCCCC-------hHHHHHHHHHHHHHHhC
Q 004149 741 VFPNDVHGIERPQS-------DFESFLNIGLWFKKYCK 771 (771)
Q Consensus 741 ~~~~~~H~~~~~~~-------~~~~~~~i~~wl~~~l~ 771 (771)
++++++|.+..... ..+.++.+.+||+++|+
T Consensus 196 ~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 233 (236)
T 1zi8_A 196 WYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQS 233 (236)
T ss_dssp EETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC
T ss_pred EECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcC
Confidence 99999998775432 34688999999998874
No 33
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=99.88 E-value=7e-22 Score=207.30 Aligned_cols=228 Identities=16% Similarity=0.208 Sum_probs=162.2
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CCcchHHHHHHHH-CCcEEEEECCCCCCCCChhhhhcCC
Q 004149 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLP 589 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~~~~~~~~~la~-~G~~V~~~d~rG~~~~g~~~~~~~~ 589 (771)
++...+| ++.+++|.|++ ...|+||++|||++... ...+...+..|++ .||.|+++|||+++++
T Consensus 67 ~~~~~~g-~i~~~~~~p~~----~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~--------- 132 (326)
T 3ga7_A 67 AVPTPYG-DVTTRLYSPQP----TSQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQA--------- 132 (326)
T ss_dssp EECCTTS-CEEEEEEESSS----SCSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTS---------
T ss_pred EeecCCC-CeEEEEEeCCC----CCCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCC---------
Confidence 3344556 89999999973 22399999999884432 3456677888887 8999999999986553
Q ss_pred CCccccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHHhCCCc------eeEEEecCCccchhhhhcCC
Q 004149 590 GKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPDK------FVAAAARNPLCNLALMVGTT 660 (771)
Q Consensus 590 ~~~~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~p~~------~~a~v~~~p~~~~~~~~~~~ 660 (771)
.....++|+.++++|+.++. .+|++||+|+|+|+||.+++.++.++++. ++++++.+|+.+......
T Consensus 133 --~~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~~-- 208 (326)
T 3ga7_A 133 --RYPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVS-- 208 (326)
T ss_dssp --CTTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCHH--
T ss_pred --CCCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCChh--
Confidence 12335789999999999863 47899999999999999999999877654 899999999865421100
Q ss_pred CCCcchhhhhccCCCCCcCCCCCChhhHHHH---------hhcCcc-----ccccCCCCcEEEEeeCCCCccCcHHHHHH
Q 004149 661 DIPDWCYVESYGSKGKDSFTESPSVEDLTRF---------HSKSPI-----SHISKVKTPTIFLLGAQDLRVPVSNGLQY 726 (771)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~sp~-----~~~~~i~~P~Lii~G~~D~~vp~~~~~~~ 726 (771)
...+... .. .........+ ...+|. ..+.+..+|+||+||+.|+++ .++..+
T Consensus 209 -------~~~~~~~----~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~--~~~~~~ 274 (326)
T 3ga7_A 209 -------RRLFGGA----WD-GLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLI--DDSRLL 274 (326)
T ss_dssp -------HHHCCCT----TT-TCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEETTCTTH--HHHHHH
T ss_pred -------HhhhcCC----CC-CCCHHHHHHHHHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecCcCcCH--HHHHHH
Confidence 0000000 00 0000110000 011221 133345679999999999998 588999
Q ss_pred HHHHHhCCCCEEEEEeCCCCccCCCC----CChHHHHHHHHHHHHHHhC
Q 004149 727 ARALREKGVETKVIVFPNDVHGIERP----QSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 727 ~~~l~~~g~~~~~~~~~~~~H~~~~~----~~~~~~~~~i~~wl~~~l~ 771 (771)
+++|++.|+++++++|++++|++... +...++++.+.+||+++|+
T Consensus 275 ~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~ 323 (326)
T 3ga7_A 275 HQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMK 323 (326)
T ss_dssp HHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999998532 2346789999999999873
No 34
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.88 E-value=4.1e-21 Score=224.88 Aligned_cols=310 Identities=12% Similarity=0.081 Sum_probs=196.2
Q ss_pred EEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecC-CccccccceEEEeCCCCCeEEEEecCCC--
Q 004149 45 TFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAP-FPVEMTGASAVVPSPSGSKLLVVRNPEN-- 121 (771)
Q Consensus 45 ~~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~-~~~~~~~~~~~~~SPdG~~la~~~~~~~-- 121 (771)
..+.+++||+.++.. + +.|+++++.++ +..++.... +.........++|||||++|||..+...
T Consensus 20 ~~~~w~~dg~~~~~~----~-------~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~ 86 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ----E-------NNILVFNAEYG--NSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQW 86 (740)
T ss_dssp CCEEECSSSEEEEEE----T-------TEEEEEETTTC--CEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECS
T ss_pred cccEECCCCcEEEEc----C-------CcEEEEECCCC--ceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeE
Confidence 345567899755542 2 36777776433 333332221 1111111234899999999999886421
Q ss_pred ---CCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCC
Q 004149 122 ---ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNS 197 (771)
Q Consensus 122 ---~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (771)
....+++++ .+++.++++..... ...++|||||++|||++
T Consensus 87 r~~~~~~~~~~d~~~~~~~~l~~~~~~----------~~~~~~SPdG~~la~~~-------------------------- 130 (740)
T 4a5s_A 87 RHSYTASYDIYDLNKRQLITEERIPNN----------TQWVTWSPVGHKLAYVW-------------------------- 130 (740)
T ss_dssp SSCEEEEEEEEETTTTEECCSSCCCTT----------EEEEEECSSTTCEEEEE--------------------------
T ss_pred EEccceEEEEEECCCCcEEEcccCCCc----------ceeeEECCCCCEEEEEE--------------------------
Confidence 113456655 45554443322222 25899999999999973
Q ss_pred CCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCC------------------ccceEEEecCCCCCccEEE
Q 004149 198 WKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSL------------------SVGQVVWAPLNEGLHQYLV 259 (771)
Q Consensus 198 ~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~------------------~~~~~~wspDg~~~~~~l~ 259 (771)
+..||++|+.+++.++++ ..+.. ....+.|||||+. |+
T Consensus 131 -------------------~~~i~~~~~~~~~~~~lt-~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~----la 186 (740)
T 4a5s_A 131 -------------------NNDIYVKIEPNLPSYRIT-WTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTF----LA 186 (740)
T ss_dssp -------------------TTEEEEESSTTSCCEECC-SCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSE----EE
T ss_pred -------------------CCeEEEEECCCCceEEEc-CCCCccceecCcccccccchhcCCCcceEECCCCCE----EE
Confidence 257999999999988884 11111 1135899999999 99
Q ss_pred EEeecCcc-ee----------------eeeeeec----cCCceeEEEecccccchhhhhhhhcCCCCC---C---cceec
Q 004149 260 FVGWSSET-RK----------------LGIKYCY----NRPCALYAVRVSLYKSEASELELKESSSED---L---PVVNL 312 (771)
Q Consensus 260 ~~~~~~~~-~~----------------~g~~~~~----~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~---~---~~~~l 312 (771)
|.+..... .. ..+.|.. +....|+++|+ ++ + ..++|
T Consensus 187 ~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~-----------------~~~~~~~~~~~~~l 249 (740)
T 4a5s_A 187 YAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNT-----------------DSLSSVTNATSIQI 249 (740)
T ss_dssp EEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEET-----------------TSCCSSSCCCEEEE
T ss_pred EEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEEC-----------------CCCCCCCcceEEEe
Confidence 98754331 10 0011111 12236899998 66 5 55666
Q ss_pred CC------CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCC----C---CCCccceeeEEecccccC
Q 004149 313 TE------SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG----N---FSSLEKIVDVIPVVQCAE 379 (771)
Q Consensus 313 t~------~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~----~---~~~~~~~~~~~~~~~~~~ 379 (771)
.. ....+..|+|||||+.+++..++. .....|+++|+.+++ . ..+....
T Consensus 250 ~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~-------~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~----------- 311 (740)
T 4a5s_A 250 TAPASMLIGDHYLCDVTWATQERISLQWLRRI-------QNYSVMDICDYDESSGRWNCLVARQHIEMS----------- 311 (740)
T ss_dssp CCCHHHHTSCEEEEEEEEEETTEEEEEEEESS-------TTEEEEEEEEEETTTTEEEECGGGCEEEEC-----------
T ss_pred cCCccCCCCCeEEEEEEEeCCCeEEEEEeCCC-------CCEEEEEEEECCCCccccceeEEEEeeecc-----------
Confidence 54 455678999999999888887764 234679999998876 1 1111000
Q ss_pred CCCCcccccC--CCCCCccccCCCEEE-EEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeC---
Q 004149 380 GDCFPGLYSS--SILSNPWLSDGCTML-LSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSS--- 453 (771)
Q Consensus 380 ~~~f~g~~~~--~~~~~~~s~dg~~l~-~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~--- 453 (771)
... |.. ....+.|||||+.|+ +.+..++..+||.+++++++.++|+.....+. ..+++|++.|+|+++.
T Consensus 312 ~~~----~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~-~~~~~d~~~i~f~~~~~~~ 386 (740)
T 4a5s_A 312 TTG----WVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVI-GIEALTSDYLYYISNEYKG 386 (740)
T ss_dssp SSS----CSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEE-EEEEECSSEEEEEESCGGG
T ss_pred CCc----eEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEE-EEEEEeCCEEEEEEecCCC
Confidence 000 000 124688999999988 66667788999999999999999998765433 3455779999998875
Q ss_pred CCCCCeEEEEEecc
Q 004149 454 PVDVPQVKYGYFVD 467 (771)
Q Consensus 454 ~~~p~~l~~~~~~~ 467 (771)
...-..||.+++.+
T Consensus 387 ~~~~~~ly~v~~~g 400 (740)
T 4a5s_A 387 MPGGRNLYKIQLID 400 (740)
T ss_dssp CTTCBEEEEEETTE
T ss_pred CCceeEEEEEECCC
Confidence 12335688777654
No 35
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=99.88 E-value=7.8e-22 Score=206.22 Aligned_cols=224 Identities=17% Similarity=0.259 Sum_probs=158.2
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-CcchHHHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCCCccccch
Q 004149 520 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV 597 (771)
Q Consensus 520 ~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~-~~~~~~~~~la~-~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~ 597 (771)
.+.+++|.|+ ..++.|+||++|||++.... ..+...+..|++ .||.|+++|||+++++ .....+
T Consensus 66 ~i~~~~~~p~---~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~-----------~~~~~~ 131 (322)
T 3fak_A 66 GCAAEWVRAP---GCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEH-----------PFPAAV 131 (322)
T ss_dssp TEEEEEEECT---TCCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTS-----------CTTHHH
T ss_pred CeEEEEEeCC---CCCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCC-----------CCCcHH
Confidence 4888899997 34578999999998865433 245556666765 6999999999986553 223457
Q ss_pred hhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCc----eeEEEecCCccchhhhhcCCCCCcchhhhhccC
Q 004149 598 NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGTTDIPDWCYVESYGS 673 (771)
Q Consensus 598 ~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 673 (771)
+|+.++++|+.++ .+|++||+|+|+|+||++++.++.+.++. ++++|+.+|+.+...... .+ ......
T Consensus 132 ~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~-----~~--~~~~~~ 203 (322)
T 3fak_A 132 EDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTND-----SF--KTRAEA 203 (322)
T ss_dssp HHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCT-----HH--HHTTTT
T ss_pred HHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCc-----CH--HHhCcc
Confidence 9999999999998 57999999999999999999999876554 899999999987532100 00 000000
Q ss_pred CCCCcCCCCCChh-hHHH--------HhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCC
Q 004149 674 KGKDSFTESPSVE-DLTR--------FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 744 (771)
Q Consensus 674 ~~~~~~~~~~~~~-~~~~--------~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~ 744 (771)
..+....... .... ....+|+...-...+|+||++|+.|.++ .++..++++|++.|+++++++|++
T Consensus 204 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g 278 (322)
T 3fak_A 204 ---DPMVAPGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEVLL--DDSIKLDAKAKADGVKSTLEIWDD 278 (322)
T ss_dssp ---CCSCCSSHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEETT
T ss_pred ---CcccCHHHHHHHHHHhcCCCCCCCcccCCCcccccCCChHhEEEcCcCccH--HHHHHHHHHHHHcCCCEEEEEeCC
Confidence 0000000000 0000 1123444322223369999999999885 688999999999999999999999
Q ss_pred CCccCCC----CCChHHHHHHHHHHHHHHh
Q 004149 745 DVHGIER----PQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 745 ~~H~~~~----~~~~~~~~~~i~~wl~~~l 770 (771)
++|++.. .+...++++.+.+||+++|
T Consensus 279 ~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 308 (322)
T 3fak_A 279 MIHVWHAFHPMLPEGKQAIVRVGEFMREQW 308 (322)
T ss_dssp CCTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred ceeehhhccCCCHHHHHHHHHHHHHHHHHH
Confidence 9998753 2334678899999999887
No 36
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.88 E-value=1.7e-21 Score=206.41 Aligned_cols=318 Identities=13% Similarity=0.137 Sum_probs=201.5
Q ss_pred HHhhcCccccceEEEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCC
Q 004149 32 QDFTNISSIDKAWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGS 111 (771)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~ 111 (771)
++|..++.+....+ ||++|+|+....+...+.....||++++. +++.+++ ..+..|+|||||+
T Consensus 9 ~~l~~~~~~~~~~~------dG~~i~~~~~~~~~~~~~~~~~l~~~d~~--~~~~~~l---------~~~~~~~~SpDg~ 71 (347)
T 2gop_A 9 KTFAKFAYLSDPRT------KGELVAYVLTKANLKDNKYENTIVIENLK--NNARRFI---------ENATMPRISPDGK 71 (347)
T ss_dssp -CCCCSCEEEEEEE------ETTEEEEEEEEEETTTTEEEEEEEEEETT--TCCEEEE---------ESCEEEEECTTSS
T ss_pred ccceeeEEcccceE------CCcEEEEEEeecCcccCCccceEEEEeCC--CCceEEc---------ccCCCeEECCCCC
Confidence 45556666655444 89999999887766556667889998764 3344554 2367899999999
Q ss_pred eEEEEecCCC-CCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCC
Q 004149 112 KLLVVRNPEN-ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGG 189 (771)
Q Consensus 112 ~la~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~ 189 (771)
+|||++...+ +..++|.++ .+++.++++.... . ..+.|||||++|+|.+.......
T Consensus 72 ~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~----------~~~~wspdg~~l~~~~~~~~~~~----------- 129 (347)
T 2gop_A 72 KIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-I----------RSLEWNEDSRKLLIVGFKRREDE----------- 129 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-E----------EEEEECTTSSEEEEEEECCCC-------------
T ss_pred EEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-c----------cceeECCCCCEEEEEEccCCCcC-----------
Confidence 9999987542 445688888 6677777776543 3 58999999999999975421100
Q ss_pred CCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce-eeccCCCCCCccceEEEecCCCCCccEEEEEeecCcce
Q 004149 190 SSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV-QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETR 268 (771)
Q Consensus 190 ~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~-~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~ 268 (771)
.........|..+ |..+......+||++|+.+++. +.++ . . .+..+.||||| . ++... .....
T Consensus 130 -----~~~~~~~~~~~~~-g~~~~~~~~~~l~~~d~~~~~~~~~l~--~-~-~~~~~~~spdg-~----~~~~~-~~~~~ 193 (347)
T 2gop_A 130 -----DFIFEDDVPAWFD-DLGFFDGEKTTFWIFDTESEEVIEEFE--K-P-RFSSGIWHRDK-I----VVNVP-HREII 193 (347)
T ss_dssp ------------CCCC----------CEEEEEEEETTTTEEEEEEE--E-E-TTCEEEEETTE-E----EEEEE-CCCSS
T ss_pred -----CcEEEcccceeec-CcccccCccceEEEEECCCCeEEeeec--C-C-CcccccCCCCe-E----EEEEe-ccccc
Confidence 0000011112222 2222223457899999999988 7773 3 3 77899999998 5 54443 22100
Q ss_pred eeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCcccc
Q 004149 269 KLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSAT 348 (771)
Q Consensus 269 ~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~ 348 (771)
. +.....+||.+| . ++.++|+.. .....+ ||||++|+|.+.... ......
T Consensus 194 ~-----~~~~~~~l~~~d-~------------------~~~~~l~~~-~~~~~~--spdg~~l~~~~~~~~---~~~~~~ 243 (347)
T 2gop_A 194 P-----QYFKFWDIYIWE-D------------------GKEEKMFEK-VSFYAV--DSDGERILLYGKPEK---KYMSEH 243 (347)
T ss_dssp C-----CSSCCEEEEEEE-T------------------TEEEEEEEE-ESEEEE--EECSSCEEEEECCSS---SCCCSS
T ss_pred c-----cccccccEEEeC-C------------------CceEEeccC-cceeeE--CCCCCEEEEEEcccc---CCcccc
Confidence 0 000134788887 2 445666655 444444 999999999987642 111234
Q ss_pred ccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCC-CccccCCCEEEEEeeeCCeeEEEEEECCCCcEEE
Q 004149 349 DSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILS-NPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLR 427 (771)
Q Consensus 349 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~ 427 (771)
.+|+++| +++.+.++..... .+.. +.|+ || ++++...++..+|| ++ +|+.++
T Consensus 244 ~~l~~~d--~~~~~~l~~~~~~-------------------~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~--~g~~~~ 296 (347)
T 2gop_A 244 NKLYIYD--GKEVMGILDEVDR-------------------GVGQAKIKD-GK--VYFTLFEEGSVNLY-IW--DGEIKP 296 (347)
T ss_dssp CEEEEEC--SSCEEESSTTCCS-------------------EEEEEEEET-TE--EEEEEEETTEEEEE-EE--SSSEEE
T ss_pred ceEEEEC--CCceEeccccCCc-------------------ccCCccEEc-Cc--EEEEEecCCcEEEE-Ec--CCceEE
Confidence 6799998 4444444332110 1223 6799 87 77888888889999 99 577777
Q ss_pred ecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEE
Q 004149 428 ITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGY 464 (771)
Q Consensus 428 l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~ 464 (771)
++.....+....+++ .++++.++...|.+||+.+
T Consensus 297 ~~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 297 IAKGRHWIMGFDVDE---IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EECSSSEEEEEEESS---SEEEEEECSSSCCEEEEES
T ss_pred EecCCCeEEeeeeeC---cEEEEEcCCCChHHheEeC
Confidence 776544344445555 6888888999999999986
No 37
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=99.88 E-value=1.8e-22 Score=213.81 Aligned_cols=241 Identities=14% Similarity=0.144 Sum_probs=166.4
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCC--
Q 004149 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP-- 589 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~-- 589 (771)
.+...+|.++.++++.|++ .++.|+||++||++... ..|.... .++++||.|+++|+||.++++........
T Consensus 86 ~~~~~~g~~l~~~~~~P~~---~~~~p~vv~~HG~g~~~--~~~~~~~-~~~~~G~~v~~~D~rG~g~s~~~~~~~~~~~ 159 (346)
T 3fcy_A 86 YFTGVRGARIHAKYIKPKT---EGKHPALIRFHGYSSNS--GDWNDKL-NYVAAGFTVVAMDVRGQGGQSQDVGGVTGNT 159 (346)
T ss_dssp EEECGGGCEEEEEEEEESC---SSCEEEEEEECCTTCCS--CCSGGGH-HHHTTTCEEEEECCTTSSSSCCCCCCCSSCC
T ss_pred EEEcCCCCEEEEEEEecCC---CCCcCEEEEECCCCCCC--CChhhhh-HHHhCCcEEEEEcCCCCCCCCCCCcccCCCC
Confidence 4455578899999999983 56789999999987664 3344333 56789999999999997665433211000
Q ss_pred --C--------C----ccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccch-h
Q 004149 590 --G--------K----VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL-A 654 (771)
Q Consensus 590 --~--------~----~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~-~ 654 (771)
+ . .....++|+.++++++.....+|.+||+|+|||+||.+++.++.++|+ ++++|+.+|.... .
T Consensus 160 ~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~~~~~ 238 (346)
T 3fcy_A 160 LNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFLSDYK 238 (346)
T ss_dssp SBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSSCCHH
T ss_pred cCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcccCHH
Confidence 0 0 001125899999999988877888999999999999999999999998 9999999997542 2
Q ss_pred hhhcCC-CCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhC
Q 004149 655 LMVGTT-DIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREK 733 (771)
Q Consensus 655 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~ 733 (771)
...... ....+.....+... ..............+...++...+.++++|+|+++|+.|.++|++.+.++++++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~- 315 (346)
T 3fcy_A 239 RVWDLDLAKNAYQEITDYFRL--FDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQS- 315 (346)
T ss_dssp HHHHTTCCCGGGHHHHHHHHH--HCTTCTTHHHHHHHHGGGCHHHHGGGCCSEEEEEEETTCSSSCHHHHHHHHTTCCS-
T ss_pred HHhhccccccchHHHHHHHHh--cCCCcchHHHHHHHhCcccHHHHHHhcCCCEEEEeeCCCCcCCHHHHHHHHHhcCC-
Confidence 221111 11111100000000 00000111222334445566677889999999999999999999988888777653
Q ss_pred CCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHH
Q 004149 734 GVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 734 g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 769 (771)
+++++++++++|.+. .++.+.+.+||++.
T Consensus 316 --~~~~~~~~~~gH~~~-----~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 316 --KKDIKVYPDYGHEPM-----RGFGDLAMQFMLEL 344 (346)
T ss_dssp --SEEEEEETTCCSSCC-----TTHHHHHHHHHHTT
T ss_pred --CcEEEEeCCCCCcCH-----HHHHHHHHHHHHHh
Confidence 689999999999986 35678999999864
No 38
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=99.88 E-value=8.3e-23 Score=210.60 Aligned_cols=228 Identities=17% Similarity=0.200 Sum_probs=164.7
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|.++.++++.|. +.|+||++||++.. ...|...+..|+++||.|+++|+||. |.+.... ........
T Consensus 14 ~g~~l~~~~~~p~------~~p~vv~~HG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~---g~s~~~~-~~~~~~~~ 81 (290)
T 3ksr_A 14 GQDELSGTLLTPT------GMPGVLFVHGWGGS--QHHSLVRAREAVGLGCICMTFDLRGH---EGYASMR-QSVTRAQN 81 (290)
T ss_dssp TTEEEEEEEEEEE------SEEEEEEECCTTCC--TTTTHHHHHHHHTTTCEEECCCCTTS---GGGGGGT-TTCBHHHH
T ss_pred CCeEEEEEEecCC------CCcEEEEeCCCCCC--cCcHHHHHHHHHHCCCEEEEeecCCC---CCCCCCc-ccccHHHH
Confidence 5789999999985 67999999997765 44677888999999999999999994 4433211 11112234
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCC
Q 004149 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 676 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (771)
.+|+.++++++.+++.++.++|+|+|||+||.+++.++.++| ++++++.+|........ ..+...... ....
T Consensus 82 ~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~---~~~~~~~~~---~~~~ 153 (290)
T 3ksr_A 82 LDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHW---DQPKVSLNA---DPDL 153 (290)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCT---TSBHHHHHH---STTH
T ss_pred HHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhh---hcccccccC---Chhh
Confidence 689999999999887778889999999999999999999887 77888888865422110 000000000 0000
Q ss_pred CcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChH
Q 004149 677 DSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDF 756 (771)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~ 756 (771)
..+..... .....++...+.++++|+|+++|+.|.+++++++..+++.++..+ +++++++++++|.+.......
T Consensus 154 ~~~~~~~~-----~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~ 227 (290)
T 3ksr_A 154 MDYRRRAL-----APGDNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNAR-SLTSRVIAGADHALSVKEHQQ 227 (290)
T ss_dssp HHHTTSCC-----CGGGCHHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSS-EEEEEEETTCCTTCCSHHHHH
T ss_pred hhhhhhhh-----hhccccHHHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccCC-CceEEEcCCCCCCCCcchHHH
Confidence 00000000 011122334566788999999999999999999999999997765 789999999999887665667
Q ss_pred HHHHHHHHHHHHHh
Q 004149 757 ESFLNIGLWFKKYC 770 (771)
Q Consensus 757 ~~~~~i~~wl~~~l 770 (771)
++++.+.+||++++
T Consensus 228 ~~~~~i~~fl~~~~ 241 (290)
T 3ksr_A 228 EYTRALIDWLTEMV 241 (290)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 88899999999875
No 39
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.87 E-value=1.6e-20 Score=203.72 Aligned_cols=243 Identities=17% Similarity=0.155 Sum_probs=182.6
Q ss_pred CCCCeEEEEecCCCCC--CeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCC
Q 004149 108 PSGSKLLVVRNPENES--PIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLG 184 (771)
Q Consensus 108 PdG~~la~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~ 184 (771)
+.+++++|++...++. ..++..+ +++..+.++.....+ .+++|||||++|+|.+.+.
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v----------~~~~~Spdg~~la~~s~~~---------- 200 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPL----------MSPAWSPDGSKLAYVTFES---------- 200 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCE----------EEEEECTTSSEEEEEECTT----------
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcc----------eeeEEcCCCCEEEEEEecC----------
Confidence 4588999998764221 4566555 444555555443333 5899999999999987542
Q ss_pred CCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeec
Q 004149 185 STKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWS 264 (771)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~ 264 (771)
+...|++||+.+++.+.+ ......+..++|||||+. |+|++..
T Consensus 201 -------------------------------~~~~i~~~d~~tg~~~~l--~~~~~~~~~~~~spdg~~----la~~~~~ 243 (415)
T 2hqs_A 201 -------------------------------GRSALVIQTLANGAVRQV--ASFPRHNGAPAFSPDGSK----LAFALSK 243 (415)
T ss_dssp -------------------------------SSCEEEEEETTTCCEEEE--ECCSSCEEEEEECTTSSE----EEEEECT
T ss_pred -------------------------------CCcEEEEEECCCCcEEEe--ecCCCcccCEEEcCCCCE----EEEEEec
Confidence 236899999999998888 444456789999999999 9988632
Q ss_pred CcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCC
Q 004149 265 SETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGA 344 (771)
Q Consensus 265 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~ 344 (771)
+....||++|+ .+++.++++.....+..+.|||||++|+|.+.+. |
T Consensus 244 ------------~g~~~i~~~d~-----------------~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~----g- 289 (415)
T 2hqs_A 244 ------------TGSLNLYVMDL-----------------ASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQA----G- 289 (415)
T ss_dssp ------------TSSCEEEEEET-----------------TTCCEEECCCCSSCEEEEEECTTSSEEEEEECTT----S-
T ss_pred ------------CCCceEEEEEC-----------------CCCCEEeCcCCCCcccceEECCCCCEEEEEECCC----C-
Confidence 23347999998 7788888988887889999999999999998653 2
Q ss_pred ccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc
Q 004149 345 HSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 424 (771)
Q Consensus 345 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~ 424 (771)
..+||++|+.+++.+.++.... ....++|||||+.|++.+...+...|+.+|+.+++
T Consensus 290 ---~~~i~~~d~~~~~~~~l~~~~~--------------------~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 290 ---RPQVYKVNINGGAPQRITWEGS--------------------QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp ---SCEEEEEETTSSCCEECCCSSS--------------------EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred ---CcEEEEEECCCCCEEEEecCCC--------------------cccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 4579999998876544332211 12356899999999988877677889999999999
Q ss_pred EEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEec
Q 004149 425 LLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 425 ~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~ 466 (771)
.+.++... ....+.|+|||+.|++...... ...|++.++.
T Consensus 347 ~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~-~~~l~~~d~~ 386 (415)
T 2hqs_A 347 VQVLSSTF-LDETPSLAPNGTMVIYSSSQGM-GSVLNLVSTD 386 (415)
T ss_dssp EEECCCSS-SCEEEEECTTSSEEEEEEEETT-EEEEEEEETT
T ss_pred EEEecCCC-CcCCeEEcCCCCEEEEEEcCCC-ccEEEEEECC
Confidence 98887654 5667899999999988876443 4468888765
No 40
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=99.87 E-value=1.9e-21 Score=203.10 Aligned_cols=240 Identities=16% Similarity=0.147 Sum_probs=164.6
Q ss_pred cccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCC-CCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCC--
Q 004149 513 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHS-VSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP-- 589 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~-~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~-- 589 (771)
+...+|.++.++++.|++ .++.|+||++||+++. . ..+ .....|+++||.|+++|+||.+++.........
T Consensus 61 ~~~~~g~~i~~~~~~P~~---~~~~p~vv~~HG~~~~~~--~~~-~~~~~l~~~g~~v~~~d~rg~g~s~~~~~~~~~~~ 134 (318)
T 1l7a_A 61 YKSFGNARITGWYAVPDK---EGPHPAIVKYHGYNASYD--GEI-HEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHA 134 (318)
T ss_dssp EEEGGGEEEEEEEEEESS---CSCEEEEEEECCTTCCSG--GGH-HHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCS
T ss_pred EEccCCCEEEEEEEeeCC---CCCccEEEEEcCCCCCCC--CCc-ccccchhhCCcEEEEecCCCCCCCCCcccccCCcc
Confidence 444567899999999974 5678999999997754 2 223 333477889999999999997765433210000
Q ss_pred -----CCc-------cccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccc-hhhh
Q 004149 590 -----GKV-------GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN-LALM 656 (771)
Q Consensus 590 -----~~~-------~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~-~~~~ 656 (771)
... ....++|+.++++++.++..+|.++|+|+|||+||.+++.++.++|+ ++++|+.+|... ....
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~~~~~ 213 (318)
T 1l7a_A 135 LGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNFERA 213 (318)
T ss_dssp SSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCHHHH
T ss_pred ccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccCHHHH
Confidence 000 12347899999999999877888999999999999999999999886 677777888643 2222
Q ss_pred hcCCCCCcchhhhhccCCCCCcCC-CCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCC
Q 004149 657 VGTTDIPDWCYVESYGSKGKDSFT-ESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGV 735 (771)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~ 735 (771)
........+.....+.. ... ..............++...+.++++|+|+++|+.|..+|++++.++++.+..
T Consensus 214 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~--- 286 (318)
T 1l7a_A 214 IDVALEQPYLEINSFFR----RNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLET--- 286 (318)
T ss_dssp HHHCCSTTTTHHHHHHH----HSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCS---
T ss_pred HhcCCcCccHHHHHHHh----ccCCcccHHHHHHhhccccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHhhcCC---
Confidence 11111111111000000 000 0000111222334456667888899999999999999999999998887754
Q ss_pred CEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 736 ETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 736 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
+++++++++++|.. ..+....+.+||+++|+
T Consensus 287 ~~~~~~~~~~~H~~-----~~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 287 KKELKVYRYFGHEY-----IPAFQTEKLAFFKQILK 317 (318)
T ss_dssp SEEEEEETTCCSSC-----CHHHHHHHHHHHHHHHC
T ss_pred CeeEEEccCCCCCC-----cchhHHHHHHHHHHHhC
Confidence 48999999999983 24678999999999885
No 41
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=99.87 E-value=5.3e-21 Score=202.83 Aligned_cols=228 Identities=17% Similarity=0.203 Sum_probs=159.1
Q ss_pred CceEEEEEEecCCCC--------------CCCCCcEEEEEcCCCCCCCCC-c--chHHHHHHH-HCCcEEEEECCCCCCC
Q 004149 518 QKPFEAIFVSSSHKK--------------DCSCDPLIVVLHGGPHSVSLS-S--YSKSLAFLS-SVGYSLLIVNYRGSLG 579 (771)
Q Consensus 518 g~~l~~~~~~P~~~~--------------~~~~~p~vv~~HGg~~~~~~~-~--~~~~~~~la-~~G~~V~~~d~rG~~~ 579 (771)
+..+.+.+|.|++.. ..++.|+||++|||++..... . |...+..|+ +.||.|+++||||.++
T Consensus 80 ~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~ 159 (351)
T 2zsh_A 80 RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPE 159 (351)
T ss_dssp TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTT
T ss_pred CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCCC
Confidence 345778899997542 246789999999987654332 2 667788888 7899999999999654
Q ss_pred CChhhhhcCCCCccccchhhHHHHHHHHHHcC----CCCCC-eEEEEEcChhHHHHHHHHHhCCC---ceeEEEecCCcc
Q 004149 580 FGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG----LANPS-KVTVVGGSHGGFLTTHLIGQAPD---KFVAAAARNPLC 651 (771)
Q Consensus 580 ~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~----~~d~~-ri~l~G~S~GG~~a~~~a~~~p~---~~~a~v~~~p~~ 651 (771)
+. ....++|+.++++|+.++. .+|.+ ||+|+|||+||.+++.++.++++ +++++|+.+|+.
T Consensus 160 ~~-----------~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~ 228 (351)
T 2zsh_A 160 NP-----------YPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMF 228 (351)
T ss_dssp SC-----------TTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCC
T ss_pred CC-----------CchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCcc
Confidence 31 2235789999999998753 47889 99999999999999999998888 899999999987
Q ss_pred chhhhhc----CCCCC--cch----hhhhccCCCCCcCCCCCChhhHHHHhhcCcc----ccccCCCC-cEEEEeeCCCC
Q 004149 652 NLALMVG----TTDIP--DWC----YVESYGSKGKDSFTESPSVEDLTRFHSKSPI----SHISKVKT-PTIFLLGAQDL 716 (771)
Q Consensus 652 ~~~~~~~----~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~----~~~~~i~~-P~Lii~G~~D~ 716 (771)
+...... ....+ ... +...+..... . ......+|. ..+.++++ |+|+++|++|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~~~~~~~~~l~~i~~pP~Lii~G~~D~ 297 (351)
T 2zsh_A 229 GGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGE-------D----REHPACNPFSPRGKSLEGVSFPKSLVVVAGLDL 297 (351)
T ss_dssp CCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTC-------C----TTSTTTCTTSTTSCCCTTCCCCEEEEEEETTST
T ss_pred CCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCC-------C----CCCcccCCCCCCccchhhCCCCCEEEEEcCCCc
Confidence 5321100 00000 000 0000000000 0 000011221 23455565 99999999999
Q ss_pred ccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCC---CCChHHHHHHHHHHHHHH
Q 004149 717 RVPVSNGLQYARALREKGVETKVIVFPNDVHGIER---PQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 717 ~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~---~~~~~~~~~~i~~wl~~~ 769 (771)
+++ .+..+++.|++.+.+++++++++++|++.. .+...++++.+.+||+++
T Consensus 298 ~~~--~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~~ 351 (351)
T 2zsh_A 298 IRD--WQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNAE 351 (351)
T ss_dssp THH--HHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC-
T ss_pred chH--HHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 885 678899999999999999999999998865 244567888999999753
No 42
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=2e-20 Score=219.65 Aligned_cols=322 Identities=12% Similarity=0.081 Sum_probs=206.0
Q ss_pred HHhhcCccccc-eEEEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcc-----------cc-
Q 004149 32 QDFTNISSIDK-AWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPV-----------EM- 98 (771)
Q Consensus 32 ~~~~~~~~~~~-~~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~-----------~~- 98 (771)
+++.+-+.+.. ....+..||||++|+|..... .+.....||++++.+ ++.++++...-.. ..
T Consensus 26 ~~~~~~~~~~~~~~~~~~~SpdG~~la~~~~~d---~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (741)
T 2ecf_A 26 EAITGPLPLSGPTLMKPKVAPDGSRVTFLRGKD---SDRNQLDLWSYDIGS--GQTRLLVDSKVVLPGTETLSDEEKARR 100 (741)
T ss_dssp HHHTSSSCTTCCCCEEEEECTTSSEEEEEECCS---SCTTEEEEEEEETTT--CCEEEEECGGGTC--------------
T ss_pred HHHhccCCcCCCCCCCceEecCCCEEEEEeccC---CCCcccEEEEEECCC--CceeEccchhhcccccccccchhhhhh
Confidence 44443333333 344667789999999986421 112245788887643 3444444321000 00
Q ss_pred --------ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCC---cceEEEecCCcccccccCCCcccceeecCCCCe
Q 004149 99 --------TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQS---QLEKEFHVPQTVHGSVYADGWFEGISWNSDETL 166 (771)
Q Consensus 99 --------~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~ 166 (771)
..+..++|||||++|+|.+. ..+++++ .++ ..++++...... ..++|||||++
T Consensus 101 ~~~~~~~~~~v~~~~~SpDg~~l~~~~~-----~~i~~~d~~~~~~~~~~~l~~~~~~~----------~~~~~SPDG~~ 165 (741)
T 2ecf_A 101 ERQRIAAMTGIVDYQWSPDAQRLLFPLG-----GELYLYDLKQEGKAAVRQLTHGEGFA----------TDAKLSPKGGF 165 (741)
T ss_dssp ------CCEESCCCEECTTSSEEEEEET-----TEEEEEESSSCSTTSCCBCCCSSSCE----------EEEEECTTSSE
T ss_pred hhhhhccccCcceeEECCCCCEEEEEeC-----CcEEEEECCCCCcceEEEcccCCccc----------ccccCCCCCCE
Confidence 12578999999999999876 3577666 454 444443332222 58999999999
Q ss_pred EEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCc-----
Q 004149 167 IAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLS----- 241 (771)
Q Consensus 167 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~----- 241 (771)
|||++. ..|++||+.+++.++++ .....
T Consensus 166 la~~~~---------------------------------------------~~i~~~d~~~g~~~~~~--~~~~~~~~~g 198 (741)
T 2ecf_A 166 VSFIRG---------------------------------------------RNLWVIDLASGRQMQLT--ADGSTTIGNG 198 (741)
T ss_dssp EEEEET---------------------------------------------TEEEEEETTTTEEEECC--CCCCSSEEES
T ss_pred EEEEeC---------------------------------------------CcEEEEecCCCCEEEec--cCCccceecc
Confidence 999731 47999999999988883 32211
Q ss_pred ------------cceEEEecCCCCCccEEEEEeecCccee--------------eeeeee----ccCCceeEEEeccccc
Q 004149 242 ------------VGQVVWAPLNEGLHQYLVFVGWSSETRK--------------LGIKYC----YNRPCALYAVRVSLYK 291 (771)
Q Consensus 242 ------------~~~~~wspDg~~~~~~l~~~~~~~~~~~--------------~g~~~~----~~~~~~l~~~d~~~~~ 291 (771)
+..+.|||||+. |+|.+....... ....|. .+....||++|+
T Consensus 199 ~~~~v~~~~~~~~~~~~~SpDg~~----l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~---- 270 (741)
T 2ecf_A 199 IAEFVADEEMDRHTGYWWAPDDSA----IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP---- 270 (741)
T ss_dssp CCCHHHHHHSCCCCSEEECTTSSC----EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS----
T ss_pred ccceeeeeccccccceEECCCCCE----EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC----
Confidence 467999999999 999875432110 000010 012237999998
Q ss_pred chhhhhhhhcCCCCC-CcceecCC---CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccc
Q 004149 292 SEASELELKESSSED-LPVVNLTE---SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK 367 (771)
Q Consensus 292 ~~~~~~~~~~~~~~~-~~~~~lt~---~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~ 367 (771)
.+ ++.+.+.. ....+..+.| |||++|++...... .....|+++|+.+++.+.+...
T Consensus 271 -------------~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~------~~~~~i~~~d~~~g~~~~~~~~ 330 (741)
T 2ecf_A 271 -------------AEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRD------QKKLDLVEVTLASNQQRVLAHE 330 (741)
T ss_dssp -------------STTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETT------SSEEEEEEEETTTCCEEEEEEE
T ss_pred -------------CCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEeccc------CCeEEEEEEECCCCceEEEEEc
Confidence 67 77666653 3445788999 99999999886431 2356899999988765433221
Q ss_pred eeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceee-EEeecCCE
Q 004149 368 IVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWS-LLTLDGDN 446 (771)
Q Consensus 368 ~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~-~~s~d~~~ 446 (771)
.. .. |......+.|||||+ +++++..++..+||.++++++ .+.++.....+... .|++|++.
T Consensus 331 ~~----------~~-----~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~ 393 (741)
T 2ecf_A 331 TS----------PT-----WVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGL 393 (741)
T ss_dssp EC----------SS-----CCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTE
T ss_pred CC----------CC-----cCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCE
Confidence 10 00 111235789999999 777777777889999998766 78887765544444 59999999
Q ss_pred EEEEEeCCCC-CCeEEEEEe
Q 004149 447 IIAVSSSPVD-VPQVKYGYF 465 (771)
Q Consensus 447 l~~~~s~~~~-p~~l~~~~~ 465 (771)
|++..+.... ..+||..+.
T Consensus 394 l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 394 AYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp EEEEECSSCTTCBEEEEEET
T ss_pred EEEEEeCCCCceEEEEEEEc
Confidence 9888764321 344666554
No 43
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=99.87 E-value=3e-21 Score=206.27 Aligned_cols=247 Identities=13% Similarity=0.084 Sum_probs=165.5
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchH-HHHHHHHCCcEEEEECCCCCCCCChhhhhcCCC
Q 004149 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK-SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG 590 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~-~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~ 590 (771)
++...+|..+.++++.|++ .+.++.|+||++||++.. ...+.. .+..|+++||.|+++|+||.+.+.... ...
T Consensus 72 ~~~~~~g~~~~~~~~~p~~-~~~~~~p~vv~~hG~~~~--~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~---~~~ 145 (367)
T 2hdw_A 72 TFANRYGITLAADLYLPKN-RGGDRLPAIVIGGPFGAV--KEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQP---RNV 145 (367)
T ss_dssp EEECTTSCEEEEEEEEESS-CCSSCEEEEEEECCTTCC--TTSHHHHHHHHHHHTTCEEEEECCTTSTTSCCSS---SSC
T ss_pred EEecCCCCEEEEEEEeCCC-CCCCCCCEEEEECCCCCc--chhhHHHHHHHHHHCCCEEEEECCCCcCCCCCcC---ccc
Confidence 3445568899999999985 235678999999997754 334543 678899999999999999955432211 111
Q ss_pred CccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhh-cCCC--------
Q 004149 591 KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV-GTTD-------- 661 (771)
Q Consensus 591 ~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~-~~~~-------- 661 (771)
.......+|+.++++++.++..++.++++|+|||+||.+++.++.++| .++++|+.+|+....... +...
T Consensus 146 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~ 224 (367)
T 2hdw_A 146 ASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDMTRVMSKGYNDSVTLEQRT 224 (367)
T ss_dssp CCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCHHHHHHHTTTTCCCHHHHH
T ss_pred cchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccccccHHHhhhhccccchHHHH
Confidence 112345789999999999987778899999999999999999999988 589999998863211100 0000
Q ss_pred ------------------------CC---c---ch---hhhhccCCC--CCc---CCCCCChhhHHHHhhcCccccccCC
Q 004149 662 ------------------------IP---D---WC---YVESYGSKG--KDS---FTESPSVEDLTRFHSKSPISHISKV 703 (771)
Q Consensus 662 ------------------------~~---~---~~---~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~sp~~~~~~i 703 (771)
.+ . .. ....+.... ... ............+...++...+.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 304 (367)
T 2hdw_A 225 RTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNMPILTYIKEI 304 (367)
T ss_dssp HHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTTSCSCTTGGGG
T ss_pred HHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcCCChhHhHHhh
Confidence 00 0 00 000000000 000 0000011223445566777788899
Q ss_pred C-CcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHh
Q 004149 704 K-TPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 704 ~-~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
+ +|+|+++|++|. +++.++++++. .+.+++++++++++|..........+.+.+.+||+++|
T Consensus 305 ~~~PvLii~G~~D~--~~~~~~~~~~~---~~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~~l 367 (367)
T 2hdw_A 305 SPRPILLIHGERAH--SRYFSETAYAA---AAEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEHL 367 (367)
T ss_dssp TTSCEEEEEETTCT--THHHHHHHHHH---SCSSEEEEEETTCCTTHHHHCTTTSCHHHHHHHHHHHC
T ss_pred cCCceEEEecCCCC--CHHHHHHHHHh---CCCCeeEEEeCCCCeeeeecCchhHHHHHHHHHHHhhC
Confidence 9 999999999998 77777777665 56789999999999974321111126789999999876
No 44
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=99.87 E-value=9.3e-21 Score=184.71 Aligned_cols=194 Identities=13% Similarity=0.166 Sum_probs=145.9
Q ss_pred cccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCC---CCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCC
Q 004149 513 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGP---HSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP 589 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~---~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~ 589 (771)
+...+| +++++++.|+ ..++.|+||++||++ .......+...+..|+++||.|+++|+||.+.....
T Consensus 11 ~~~~~g-~l~~~~~~p~---~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~------ 80 (208)
T 3trd_A 11 IQGPVG-QLEVMITRPK---GIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGR------ 80 (208)
T ss_dssp EECSSS-EEEEEEECCS---SCCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC------
T ss_pred EECCCc-eEEEEEEcCC---CCCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCC------
Confidence 445567 9999999986 345789999999954 222233456778899999999999999995543221
Q ss_pred CCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhh
Q 004149 590 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 669 (771)
Q Consensus 590 ~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~ 669 (771)
........+|+.++++++.++ .+.++++|+|||+||.+++.++ .+| +++++|+.+|..+..
T Consensus 81 ~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~~--------------- 141 (208)
T 3trd_A 81 YDNGVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFYE--------------- 141 (208)
T ss_dssp CCTTTHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTSG---------------
T ss_pred ccchHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccccC---------------
Confidence 122234578999999999887 3558999999999999999999 667 899999988875100
Q ss_pred hccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccC
Q 004149 670 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 749 (771)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 749 (771)
....+..+++|+|+++|++|..+|++.++++++.+.. +++++++++++|.+
T Consensus 142 --------------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~~H~~ 192 (208)
T 3trd_A 142 --------------------------GFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISS---PVEFVVMSGASHFF 192 (208)
T ss_dssp --------------------------GGTTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHSSS---CCEEEEETTCCSSC
T ss_pred --------------------------CchhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHccC---ceEEEEeCCCCCcc
Confidence 0122344579999999999999999998888877654 38999999999988
Q ss_pred CCCCChHHHHHHHHHHH
Q 004149 750 ERPQSDFESFLNIGLWF 766 (771)
Q Consensus 750 ~~~~~~~~~~~~i~~wl 766 (771)
... ..++.+.+.+||
T Consensus 193 ~~~--~~~~~~~i~~fl 207 (208)
T 3trd_A 193 HGR--LIELRELLVRNL 207 (208)
T ss_dssp TTC--HHHHHHHHHHHH
T ss_pred ccc--HHHHHHHHHHHh
Confidence 743 245666666665
No 45
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.86 E-value=3.6e-21 Score=207.65 Aligned_cols=311 Identities=13% Similarity=0.141 Sum_probs=203.3
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcccccc-ceEEEeCCCCCeEEEEecCCCCCC
Q 004149 46 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTG-ASAVVPSPSGSKLLVVRNPENESP 124 (771)
Q Consensus 46 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~-~~~~~~SPdG~~la~~~~~~~~~~ 124 (771)
.+..||||++|+|..+. .....+|++++ .+++.++++... .. ...+.|||||++|+|++...
T Consensus 40 ~~~~SpdG~~l~~~~~~------~g~~~l~~~d~--~~~~~~~l~~~~-----~~~~~~~~~spdg~~l~~~~~~~---- 102 (396)
T 3c5m_A 40 QKCFTQDGKKLLFAGDF------DGNRNYYLLNL--ETQQAVQLTEGK-----GDNTFGGFISTDERAFFYVKNEL---- 102 (396)
T ss_dssp SCCBCTTSCEEEEEECT------TSSCEEEEEET--TTTEEEECCCSS-----CBCTTTCEECTTSSEEEEEETTT----
T ss_pred cCcCCCCCCEEEEEEec------CCCceEEEEEC--CCCcEEEeecCC-----CCccccceECCCCCEEEEEEcCC----
Confidence 35678999999998754 13457888765 344556665443 22 23388999999999998653
Q ss_pred eEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCccc
Q 004149 125 IQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGD 203 (771)
Q Consensus 125 ~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (771)
+++.++ .+++.++++.... . |+|||++|+|.+...... .+.....
T Consensus 103 ~l~~~d~~~~~~~~~~~~~~-------------~--~~~~g~~l~~~~~~~~~~-------------------~~~~~~~ 148 (396)
T 3c5m_A 103 NLMKVDLETLEEQVIYTVDE-------------E--WKGYGTWVANSDCTKLVG-------------------IEILKRD 148 (396)
T ss_dssp EEEEEETTTCCEEEEEECCT-------------T--EEEEEEEEECTTSSEEEE-------------------EEEEGGG
T ss_pred cEEEEECCCCCcEEEEeccc-------------c--cCCCCCEEEeccCCcccc-------------------ccccccc
Confidence 588777 5666566555321 1 788888888864321100 0000112
Q ss_pred ccCCcCcccC-----CccCceEEEEEccCCceeeccCCCCCCccceEEEec-CCCCCccEEEEEeecCcceeeeeeeecc
Q 004149 204 WEEDWGETYA-----GKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP-LNEGLHQYLVFVGWSSETRKLGIKYCYN 277 (771)
Q Consensus 204 ~~~d~g~~~~-----~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wsp-Dg~~~~~~l~~~~~~~~~~~~g~~~~~~ 277 (771)
|++|....+. ......|+++|+.+++.+.+ ......+..+.||| ||+. |+|++.... ..
T Consensus 149 ~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~--~~~~~~~~~~~~sp~dg~~----l~~~~~~~~---------~~ 213 (396)
T 3c5m_A 149 WQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVI--HQDTAWLGHPIYRPFDDST----VGFCHEGPH---------DL 213 (396)
T ss_dssp CCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEE--EEESSCEEEEEEETTEEEE----EEEEECSCS---------SS
T ss_pred cCCCCcceeeeeeccCCCcceEEEEECCCCcEEee--ccCCcccccceECCCCCCE----EEEEecCCC---------CC
Confidence 3333211111 12457899999999998888 44455677899999 8998 999873110 01
Q ss_pred CCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCC--ccccceeecCCCCEEEEEecCCCCCCCCccccccceeee
Q 004149 278 RPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESI--SSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRID 355 (771)
Q Consensus 278 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~--~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d 355 (771)
...+||.+|+ ++++.+.++... ..+..+.|||||++|+|.+.+. | .....|+++|
T Consensus 214 ~~~~l~~~d~-----------------~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~----~--~~~~~l~~~d 270 (396)
T 3c5m_A 214 VDARMWLVNE-----------------DGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFK----G--QTDRVIYKAN 270 (396)
T ss_dssp CSCCCEEEET-----------------TSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEET----T--TCCEEEEEEC
T ss_pred CCceEEEEEC-----------------CCCceeEeeccCCCccccceEECCCCCEEEEEecCC----C--CccceEEEEE
Confidence 2248999998 677777777642 3477899999999999998764 2 1123499999
Q ss_pred cCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCcccc-CCCEEEEEee-------------eCCeeEEEEEECC
Q 004149 356 WPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS-DGCTMLLSSI-------------WGSSQVIISVNVS 421 (771)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~-dg~~l~~~~~-------------~~~~~~l~~~d~~ 421 (771)
+.+++.+.+.. +++ .. +.|+| ||+.|++... ..+...||.+|+.
T Consensus 271 ~~~g~~~~l~~----------------~~~-----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 271 PETLENEEVMV----------------MPP-----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp TTTCCEEEEEE----------------CCS-----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT
T ss_pred CCCCCeEEeee----------------CCC-----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc
Confidence 98766433211 111 11 67999 9997766432 1244689999999
Q ss_pred CCcEEEecCCCC-----------CceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 422 SGELLRITPAES-----------NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 422 tg~~~~l~~~~~-----------~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
+++.++++.... ....+.|++||+.|++..... ...+||+.++.++
T Consensus 329 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~-~~~~l~~~~~~~~ 385 (396)
T 3c5m_A 329 AKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFE-GVPAIYIADVPES 385 (396)
T ss_dssp TTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCTT
T ss_pred cCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCC-CCceEEEEEEccc
Confidence 998888875543 134468999999999887654 4567999887654
No 46
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=99.86 E-value=9.6e-21 Score=200.11 Aligned_cols=245 Identities=15% Similarity=0.161 Sum_probs=164.3
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCC
Q 004149 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 591 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~ 591 (771)
.+...+|..+.++++.|. ..+.|+||++||++.. ...|...+..|+++||.|+++|+||.+.+.. ......
T Consensus 39 ~~~~~dg~~l~~~~~~p~----~~~~p~vv~~HG~~~~--~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~---~~~~~~ 109 (342)
T 3hju_A 39 HLVNADGQYLFCRYWKPT----GTPKALIFVSHGAGEH--SGRYEELARMLMGLDLLVFAHDHVGHGQSEG---ERMVVS 109 (342)
T ss_dssp EEECTTSCEEEEEEECCS----SCCSEEEEEECCTTCC--GGGGHHHHHHHHTTTEEEEEECCTTSTTSCS---STTCCS
T ss_pred eEEccCCeEEEEEEeCCC----CCCCcEEEEECCCCcc--cchHHHHHHHHHhCCCeEEEEcCCCCcCCCC---cCCCcC
Confidence 345667899999999886 3457999999997765 3478888999999999999999999544322 111111
Q ss_pred ccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcc--hhhh
Q 004149 592 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDW--CYVE 669 (771)
Q Consensus 592 ~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~--~~~~ 669 (771)
.....++|+.++++++..+ .+..+++|+|||+||.+++.++.++|++++++|+.+|........... .... ....
T Consensus 110 ~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~ 186 (342)
T 3hju_A 110 DFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATT-FKVLAAKVLN 186 (342)
T ss_dssp CTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSH-HHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhH-HHHHHHHHHH
Confidence 2223478999999999887 456789999999999999999999999999999999976532110000 0000 0000
Q ss_pred hccC----CCCCcCCCCCChhhHHHHh---------------------hcCccccccCCCCcEEEEeeCCCCccCcHHHH
Q 004149 670 SYGS----KGKDSFTESPSVEDLTRFH---------------------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGL 724 (771)
Q Consensus 670 ~~~~----~~~~~~~~~~~~~~~~~~~---------------------~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~ 724 (771)
.+.. .................+. ..+....+.++++|+|+++|++|.++|++.+.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~ 266 (342)
T 3hju_A 187 LVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAY 266 (342)
T ss_dssp HHCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSSCHHHHH
T ss_pred HhccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCCCcccChHHHH
Confidence 0000 0000000000001111110 00112456788999999999999999999999
Q ss_pred HHHHHHHhCCCCEEEEEeCCCCccCCCCCC--hHHHHHHHHHHHHHHh
Q 004149 725 QYARALREKGVETKVIVFPNDVHGIERPQS--DFESFLNIGLWFKKYC 770 (771)
Q Consensus 725 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~--~~~~~~~i~~wl~~~l 770 (771)
.+++.+.. ..++++++++++|.+..... ..+.+..+++||++++
T Consensus 267 ~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~ 312 (342)
T 3hju_A 267 LLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 312 (342)
T ss_dssp HHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCC--CCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhccc
Confidence 98887753 25899999999998764332 4567788999998875
No 47
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=99.86 E-value=3.1e-21 Score=197.71 Aligned_cols=233 Identities=11% Similarity=0.058 Sum_probs=158.5
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchH---HHHHHHHCCcEEEEECCCCCCC-----------CC
Q 004149 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLG-----------FG 581 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~---~~~~la~~G~~V~~~d~rG~~~-----------~g 581 (771)
..|.++.+.+|.|+++...++.|+||++||++... ..|.. ....+++.||.|+++|.++.+. .|
T Consensus 26 ~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~g 103 (280)
T 3i6y_A 26 TLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSD--ENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQG 103 (280)
T ss_dssp TTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCS--SHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCSSTTSSTT
T ss_pred ccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCCh--hHHhhcccHHHHHhhCCeEEEEeCCcccccccCcccccccccC
Confidence 45788999999998765578899999999977653 23433 3456678899999999875321 11
Q ss_pred hhhhhcCCC-Ccc-ccc-hhhH-HHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhh
Q 004149 582 EEALQSLPG-KVG-SQD-VNDV-LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV 657 (771)
Q Consensus 582 ~~~~~~~~~-~~~-~~~-~~D~-~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~ 657 (771)
.++...... .+. ... ...+ .+.++++.+...+ ++|++|+|||+||++++.++.++|++++++++.+|+++.....
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~~ 182 (280)
T 3i6y_A 104 AGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPV-SDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINNPVNCP 182 (280)
T ss_dssp CCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCCGGGSH
T ss_pred ccccccccCCCccchhhHHHHHHHHHHHHHHHhCCC-CCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCccccccCc
Confidence 111111100 000 001 1222 2444555455434 5899999999999999999999999999999999987643211
Q ss_pred cCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCC--CcEEEEeeCCCCccCcHH-HHHHHHHHHhCC
Q 004149 658 GTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK--TPTIFLLGAQDLRVPVSN-GLQYARALREKG 734 (771)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~--~P~Lii~G~~D~~vp~~~-~~~~~~~l~~~g 734 (771)
.. ...+...++. ....+...+|...+.+++ +|+||+||+.|.+++... ++++++.|++.|
T Consensus 183 ~~----~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~l~~~g 245 (280)
T 3i6y_A 183 WG----QKAFTAYLGK-------------DTDTWREYDASLLMRAAKQYVPALVDQGEADNFLAEQLKPEVLEAAASSNN 245 (280)
T ss_dssp HH----HHHHHHHHCS-------------CGGGTGGGCHHHHHHHCSSCCCEEEEEETTCTTHHHHTCHHHHHHHHHHTT
T ss_pred hH----HHHHHHhcCC-------------chHHHHhcCHHHHHHhcCCCccEEEEEeCCCccccchhhHHHHHHHHHHcC
Confidence 00 0000011111 112334556666555554 899999999999998755 889999999999
Q ss_pred CCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 735 VETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 735 ~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
++++++++|+++|.+. .....+.++++|+.++|+
T Consensus 246 ~~~~~~~~~g~~H~~~---~~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 246 YPLELRSHEGYDHSYY---FIASFIEDHLRFHSNYLN 279 (280)
T ss_dssp CCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEeCCCCccHH---HHHHhHHHHHHHHHhhcc
Confidence 9999999999999863 234667889999999885
No 48
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=99.86 E-value=1.5e-21 Score=200.18 Aligned_cols=233 Identities=14% Similarity=0.098 Sum_probs=154.3
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHH---HHHHHHCCcEEEEECC--CCCCCCChhh------
Q 004149 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKS---LAFLSSVGYSLLIVNY--RGSLGFGEEA------ 584 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~---~~~la~~G~~V~~~d~--rG~~~~g~~~------ 584 (771)
..|.++.+.+|.|++.. .++.|+||++||+++.. ..|... .+.++++||.|+++|+ ||.++.|...
T Consensus 25 ~~~~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g~ 101 (282)
T 3fcx_A 25 ELNCKMKFAVYLPPKAE-TGKCPALYWLSGLTCTE--QNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGT 101 (282)
T ss_dssp TTTEEEEEEEEECGGGG-TSCEEEEEEECCTTCCS--HHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CCC
T ss_pred hcCCeeEEEEEcCCCCC-CCCCCEEEEEcCCCCCc--cchhhcchHHHHhhcCCeEEEEeccccCccccccccccccccC
Confidence 35778999999998542 36789999999987653 234333 5778899999999999 8766544321
Q ss_pred ----hhcCCC-Cccc--cchhhHH-HHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhh
Q 004149 585 ----LQSLPG-KVGS--QDVNDVL-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM 656 (771)
Q Consensus 585 ----~~~~~~-~~~~--~~~~D~~-~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~ 656 (771)
...... .+.. ....++. .+++++.+...+|++||+|+|+|+||++|+.++.++|++++++++.+|+++....
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~ 181 (282)
T 3fcx_A 102 GAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLC 181 (282)
T ss_dssp CCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCCGGGS
T ss_pred CcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccCcccC
Confidence 110010 0000 1122233 4445555455578899999999999999999999999999999999998764321
Q ss_pred hcCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccc---cCCCCcEEEEeeCCCCccCcHH--HHHHHHHHH
Q 004149 657 VGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHI---SKVKTPTIFLLGAQDLRVPVSN--GLQYARALR 731 (771)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~---~~i~~P~Lii~G~~D~~vp~~~--~~~~~~~l~ 731 (771)
... ...+...++. ....+...+|...+ ..+++|+|++||+.|.++|..+ +++++++|+
T Consensus 182 ~~~----~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~~l~ 244 (282)
T 3fcx_A 182 PWG----KKAFSGYLGT-------------DQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACT 244 (282)
T ss_dssp HHH----HHHHHHHHC----------------CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHHTTSSCHHHHHHHHH
T ss_pred chh----HHHHHHhcCC-------------chhhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccccchhhHHHHHHHHH
Confidence 000 0000011111 01112233444333 3447999999999999996655 568999999
Q ss_pred hCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 732 EKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 732 ~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
+.|+++++.++|+++|.+.. ...++.+.+.|+.++|+
T Consensus 245 ~~g~~~~~~~~~g~~H~~~~---~~~~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 245 EKKIPVVFRLQEDYDHSYYF---IATFITDHIRHHAKYLN 281 (282)
T ss_dssp HTTCCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHTT
T ss_pred HcCCceEEEECCCCCcCHHH---HHhhhHHHHHHHHHhhc
Confidence 99999999999999998642 33567788899999875
No 49
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=99.86 E-value=1.6e-21 Score=203.02 Aligned_cols=228 Identities=18% Similarity=0.191 Sum_probs=160.9
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCCcchHHHHHHHHC-CcEEEEECCCCCCCCChhhhhcCCCCc
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLPGKV 592 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~-~~~~~~~~~~~la~~-G~~V~~~d~rG~~~~g~~~~~~~~~~~ 592 (771)
..+| ++.+++|.|++. .++.|+||++|||++.. ....|...+..|+++ ||.|+++||||.+++.
T Consensus 55 ~~~g-~l~~~~~~P~~~--~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~~~----------- 120 (310)
T 2hm7_A 55 LPGR-TLKVRMYRPEGV--EPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHK----------- 120 (310)
T ss_dssp ETTE-EEEEEEEECTTC--CSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC-----------
T ss_pred cCCC-eEEEEEEecCCC--CCCCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCCCC-----------
Confidence 3445 899999999742 46689999999977543 344677788888875 9999999999966532
Q ss_pred cccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHHhCCC----ceeEEEecCCccchhhhhcCCCCCcc
Q 004149 593 GSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLALMVGTTDIPDW 665 (771)
Q Consensus 593 ~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~p~----~~~a~v~~~p~~~~~~~~~~~~~~~~ 665 (771)
.....+|+.++++|+.++. .++.++|+|+|||+||.+++.++.++|+ .++++|+.+|..+..... ..+.+
T Consensus 121 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~~~~---~~~~~ 197 (310)
T 2hm7_A 121 FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAH---PPASI 197 (310)
T ss_dssp TTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCCTTS---CCHHH
T ss_pred CCccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCCccc---CCcch
Confidence 1234789999999998864 3577899999999999999999987765 699999999987643100 00000
Q ss_pred hhhhhccCCCCCcCCCCCChhhH----H---------HHhhcCcccc--ccCCCCcEEEEeeCCCCccCcHHHHHHHHHH
Q 004149 666 CYVESYGSKGKDSFTESPSVEDL----T---------RFHSKSPISH--ISKVKTPTIFLLGAQDLRVPVSNGLQYARAL 730 (771)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~----~---------~~~~~sp~~~--~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l 730 (771)
..... ... ...... . .....+|... +..+ +|+||++|++|.++ .++..+++.+
T Consensus 198 ---~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~-~P~lii~G~~D~~~--~~~~~~~~~l 265 (310)
T 2hm7_A 198 ---EENAE---GYL---LTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDLSGL-PPAYIATAQYDPLR--DVGKLYAEAL 265 (310)
T ss_dssp ---HHTSS---SSS---SCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTC-CCEEEEEEEECTTH--HHHHHHHHHH
T ss_pred ---hhcCC---CCC---CCHHHHHHHHHHhCCCCCccCCccCCCCcCccccCC-CCEEEEEecCCCch--HHHHHHHHHH
Confidence 00000 000 000000 0 0012233321 2333 49999999999988 6788999999
Q ss_pred HhCCCCEEEEEeCCCCccCCC----CCChHHHHHHHHHHHHHHhC
Q 004149 731 REKGVETKVIVFPNDVHGIER----PQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 731 ~~~g~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~wl~~~l~ 771 (771)
++.|++++++++++++|++.. .+...+++..+.+||+++|+
T Consensus 266 ~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 310 (310)
T 2hm7_A 266 NKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDALA 310 (310)
T ss_dssp HHTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHHC
T ss_pred HHCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHhC
Confidence 999999999999999998653 22345788999999999875
No 50
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=99.86 E-value=2.2e-20 Score=192.93 Aligned_cols=245 Identities=15% Similarity=0.179 Sum_probs=162.7
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCC
Q 004149 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 591 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~ 591 (771)
.+...+|..++++++.|. +++.|+||++||.+.. ...|...+..|+++||.|+++|+||.+.... ......
T Consensus 21 ~~~~~~g~~l~~~~~~~~----~~~~~~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~---~~~~~~ 91 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPT----GTPKALIFVSHGAGEH--SGRYEELARMLMGLDLLVFAHDHVGHGQSEG---ERMVVS 91 (303)
T ss_dssp EEECTTSCEEEEEEECCS----SCCSEEEEEECCTTCC--GGGGHHHHHHHHHTTEEEEEECCTTSTTSCS---STTCCS
T ss_pred eEecCCCeEEEEEEeccC----CCCCeEEEEECCCCch--hhHHHHHHHHHHhCCCcEEEeCCCCCCCCCC---CCCCCC
Confidence 345667889999999876 3457999999997665 4478888999999999999999999544321 111111
Q ss_pred ccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhc-----------CC
Q 004149 592 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-----------TT 660 (771)
Q Consensus 592 ~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~-----------~~ 660 (771)
.....++|+.++++++..+ .+.++++|+|||+||.+++.++.++|++++++|+.+|......... ..
T Consensus 92 ~~~~~~~d~~~~l~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (303)
T 3pe6_A 92 DFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNS 169 (303)
T ss_dssp STHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhhc--cCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHHHHHHHH
Confidence 2223378888889888876 3457899999999999999999999999999999999764321100 00
Q ss_pred CCCcch--------------hhhhccCCCCCcCCCCCChhh-HHHHh-hcCccccccCCCCcEEEEeeCCCCccCcHHHH
Q 004149 661 DIPDWC--------------YVESYGSKGKDSFTESPSVED-LTRFH-SKSPISHISKVKTPTIFLLGAQDLRVPVSNGL 724 (771)
Q Consensus 661 ~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~ 724 (771)
..+... ....+........ ....... ...+. .......+.++++|+|+++|++|..++++.++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 248 (303)
T 3pe6_A 170 VLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICR-AGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAY 248 (303)
T ss_dssp TCCSCCCCCCCGGGTCSCHHHHHHHHTCTTSCC-SCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSBCHHHHH
T ss_pred hcccccCCccchhhhhcchhHHHHhccCccccc-cchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeCCCCCCChHHHH
Confidence 000000 0000000000000 0000000 00000 00112346788999999999999999999998
Q ss_pred HHHHHHHhCCCCEEEEEeCCCCccCCCCCC--hHHHHHHHHHHHHHHh
Q 004149 725 QYARALREKGVETKVIVFPNDVHGIERPQS--DFESFLNIGLWFKKYC 770 (771)
Q Consensus 725 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~--~~~~~~~i~~wl~~~l 770 (771)
.+++.+.. ..++++++++++|.+..... ..+.+..+++||++++
T Consensus 249 ~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~ 294 (303)
T 3pe6_A 249 LLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 294 (303)
T ss_dssp HHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhccc--CCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccC
Confidence 88887753 25899999999998764332 4567788999999876
No 51
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=99.86 E-value=2.7e-21 Score=219.15 Aligned_cols=254 Identities=14% Similarity=0.163 Sum_probs=171.8
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC----CC-CcchH-HH---HHHHHCCcEEEEECCCCCCCCCh
Q 004149 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV----SL-SSYSK-SL---AFLSSVGYSLLIVNYRGSLGFGE 582 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~----~~-~~~~~-~~---~~la~~G~~V~~~d~rG~~~~g~ 582 (771)
.+...||.+|+++++.|++ .++.|+||++||.+... .. ..|.. .. +.|+++||+|+++|+||+++++.
T Consensus 29 ~i~~~DG~~L~~~~~~P~~---~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g 105 (615)
T 1mpx_A 29 MIPMRDGVKLHTVIVLPKG---AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEG 105 (615)
T ss_dssp EEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEECCCCCEEEEEEEeCCC---CCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCC
Confidence 3456688999999999974 36789999999844321 11 12221 22 78999999999999999888766
Q ss_pred hhhhcCC-----CCccccchhhHHHHHHHHHHc-CCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhh-
Q 004149 583 EALQSLP-----GKVGSQDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL- 655 (771)
Q Consensus 583 ~~~~~~~-----~~~~~~~~~D~~~~i~~l~~~-~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~- 655 (771)
.+....+ ..++..+.+|+.++++||.++ +..+ .||+|+|+||||++++.++..+|+.++++|+.+|+.++..
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d~~~~ 184 (615)
T 1mpx_A 106 DYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMIDGWMG 184 (615)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCCTTTT
T ss_pred ccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCccccccc
Confidence 5432211 111226789999999999998 6665 5999999999999999999888999999999999988422
Q ss_pred -hh---cCCCCC--cchhhhhccCCC--------C---C-------------cC-C-CCCChh-------hHHHHhhcCc
Q 004149 656 -MV---GTTDIP--DWCYVESYGSKG--------K---D-------------SF-T-ESPSVE-------DLTRFHSKSP 696 (771)
Q Consensus 656 -~~---~~~~~~--~~~~~~~~~~~~--------~---~-------------~~-~-~~~~~~-------~~~~~~~~sp 696 (771)
.. +..... .|.+........ . . .+ . ..+.+. ..+.|...||
T Consensus 185 ~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~w~~~Sp 264 (615)
T 1mpx_A 185 DDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDAFWQEQAL 264 (615)
T ss_dssp SSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTCSSCHHHHTTCH
T ss_pred cccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHHHhCCCcChhhhhcCh
Confidence 11 000000 010000000000 0 0 00 0 000000 1134557789
Q ss_pred cccccC--CCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCC---EEEEEeCCCCccCCC------------CCChHH-H
Q 004149 697 ISHISK--VKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE---TKVIVFPNDVHGIER------------PQSDFE-S 758 (771)
Q Consensus 697 ~~~~~~--i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~---~~~~~~~~~~H~~~~------------~~~~~~-~ 758 (771)
..++++ |++|+|++||..|.+ ++.++.+++++|+++|++ +++++.|. +|+... .+.... .
T Consensus 265 ~~~~~~~~I~~P~Lii~G~~D~~-~~~~~~~~~~aL~~~g~p~~~~~lvigp~-~H~~~~~~~~~~~~~~f~~~~~~~~~ 342 (615)
T 1mpx_A 265 DKVMARTPLKVPTMWLQGLWDQE-DMWGAIHSYAAMEPRDKRNTLNYLVMGPW-RHSQVNYDGSALGALNFEGDTARQFR 342 (615)
T ss_dssp HHHHHTSCCCSCEEEEEETTCSS-CSSHHHHHHHHHGGGCTTSSSEEEEEESC-CTTGGGSCCSEETTEECSSCHHHHHH
T ss_pred hhhhhccCCCCCEEEeecccCcc-ccccHHHHHHHHHhhcCCCcCCEEEECCC-CCCCccccccccCccccCcccchhhh
Confidence 989999 999999999999998 888999999999998753 88988887 697511 111112 2
Q ss_pred HHHHHHHHHHHhC
Q 004149 759 FLNIGLWFKKYCK 771 (771)
Q Consensus 759 ~~~i~~wl~~~l~ 771 (771)
.+.+++||++|||
T Consensus 343 ~~~~~~wfd~~Lk 355 (615)
T 1mpx_A 343 HDVLRPFFDQYLV 355 (615)
T ss_dssp HHTHHHHHHHHHS
T ss_pred hhHHHHHHHHHhc
Confidence 5778999999996
No 52
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=99.86 E-value=7.3e-21 Score=199.28 Aligned_cols=237 Identities=20% Similarity=0.204 Sum_probs=160.6
Q ss_pred cccCCCc-eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CCcchHHHHHHHH-CCcEEEEECCCCCCCCChhhhhcCC
Q 004149 513 LTKGAQK-PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLP 589 (771)
Q Consensus 513 ~~~~~g~-~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~~~~~~~~~la~-~G~~V~~~d~rG~~~~g~~~~~~~~ 589 (771)
+...+|. ++.+++|.|++ ..++.|+||++|||++... ...+...+..|++ .||.|+++||||.+++.
T Consensus 56 i~~~~g~~~l~~~~~~P~~--~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~~~-------- 125 (323)
T 1lzl_A 56 APGLDGDPEVKIRFVTPDN--TAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETT-------- 125 (323)
T ss_dssp ECCSTTCCCEEEEEEEESS--CCSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSC--------
T ss_pred ecCCCCCceeEEEEEecCC--CCCCCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCCCC--------
Confidence 3444565 79999999974 3457899999999885432 3456677788876 59999999999965531
Q ss_pred CCccccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHHhCCC----ceeEEEecCCccchhhh----hc
Q 004149 590 GKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLALM----VG 658 (771)
Q Consensus 590 ~~~~~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~p~----~~~a~v~~~p~~~~~~~----~~ 658 (771)
.....+|+.++++|+.++ ..+|+++|+|+|||+||.+++.++.++++ .++++++.+|+.+.... ..
T Consensus 126 ---~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~ 202 (323)
T 1lzl_A 126 ---FPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETVSMTN 202 (323)
T ss_dssp ---TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSHHHHH
T ss_pred ---CCchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCCcCchhHHH
Confidence 123478999999998874 23677899999999999999999987665 48999999998764321 00
Q ss_pred CCCCCcch------hhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCC--CCcEEEEeeCCCCccCcHHHHHHHHHH
Q 004149 659 TTDIPDWC------YVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV--KTPTIFLLGAQDLRVPVSNGLQYARAL 730 (771)
Q Consensus 659 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i--~~P~Lii~G~~D~~vp~~~~~~~~~~l 730 (771)
......+. +...+....... ..........+|... ..+ .+|+||++|+.|.++ .++..++++|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~sp~~~-~~~~~~~P~li~~G~~D~~~--~~~~~~~~~l 273 (323)
T 1lzl_A 203 FVDTPLWHRPNAILSWKYYLGESYSG------PEDPDVSIYAAPSRA-TDLTGLPPTYLSTMELDPLR--DEGIEYALRL 273 (323)
T ss_dssp CSSCSSCCHHHHHHHHHHHHCTTCCC------TTCSCCCTTTCGGGC-SCCTTCCCEEEEEETTCTTH--HHHHHHHHHH
T ss_pred hccCCCCCHHHHHHHHHHhCCCCccc------ccccCCCcccCcccC-cccCCCChhheEECCcCCch--HHHHHHHHHH
Confidence 00000000 000000000000 000000111233322 122 279999999999988 6889999999
Q ss_pred HhCCCCEEEEEeCCCCccCCCCC---ChHHHHHHHHHHHHHHhC
Q 004149 731 REKGVETKVIVFPNDVHGIERPQ---SDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 731 ~~~g~~~~~~~~~~~~H~~~~~~---~~~~~~~~i~~wl~~~l~ 771 (771)
++.|++++++++++++|++.... ...++++.+.+||+++++
T Consensus 274 ~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~ 317 (323)
T 1lzl_A 274 LQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLR 317 (323)
T ss_dssp HHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTC
T ss_pred HHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999865322 245788999999998874
No 53
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.85 E-value=1e-20 Score=203.76 Aligned_cols=280 Identities=13% Similarity=0.129 Sum_probs=171.2
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeE
Q 004149 47 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 126 (771)
Q Consensus 47 ~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 126 (771)
|..||||++|+|..+. ....+||++++ .+++.++++... ......+.|||||++|+|.+... .+
T Consensus 41 ~~~SpDg~~l~~~~~~------~g~~~l~~~d~--~~g~~~~lt~~~----~~~~~~~~~spdg~~l~~~~~~~----~l 104 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAF------DGPWNYYLLDL--NTQVATQLTEGR----GDNTFGGFLSPDDDALFYVKDGR----NL 104 (388)
T ss_dssp CCBCTTSCEEEEEECT------TSSCEEEEEET--TTCEEEECCCSS----CBCSSSCEECTTSSEEEEEETTT----EE
T ss_pred ccCCCCCCEEEEEEcC------CCCceEEEEeC--CCCceEEeeeCC----CCCccceEEcCCCCEEEEEeCCC----eE
Confidence 7789999999998752 13457888775 445667776553 11223678999999999987532 34
Q ss_pred EEEe-cCCcceEEEecCC-------------------------------------------------------ccccccc
Q 004149 127 FELW-SQSQLEKEFHVPQ-------------------------------------------------------TVHGSVY 150 (771)
Q Consensus 127 ~~~~-~~~~~~~~~~~~~-------------------------------------------------------~~~g~~~ 150 (771)
+.++ .+++.+.++..+. +....+.
T Consensus 105 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 184 (388)
T 3pe7_A 105 MRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL 184 (388)
T ss_dssp EEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE
T ss_pred EEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee
Confidence 4444 3333222221110 0000000
Q ss_pred -CCCcccceeecC-CCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCC
Q 004149 151 -ADGWFEGISWNS-DETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG 228 (771)
Q Consensus 151 -~~~~~~~~~wSp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~ 228 (771)
....+..+.||| ||++|+|.+..... .....||++|++++
T Consensus 185 ~~~~~~~~~~~sp~dg~~l~~~~~~~~~--------------------------------------~~~~~l~~~d~~~~ 226 (388)
T 3pe7_A 185 QENQWLGHPIYRPYDDSTVAFCHEGPHD--------------------------------------LVDARMWLINEDGT 226 (388)
T ss_dssp EESSCEEEEEEETTEEEEEEEEECSCTT--------------------------------------TSSCSEEEEETTSC
T ss_pred cCCccccccEECCCCCCEEEEEEecCCC--------------------------------------CCcceEEEEeCCCC
Confidence 112345788999 99999998753210 02468999999999
Q ss_pred ceeeccCCCCC--CccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCC
Q 004149 229 EVQAVKGIPKS--LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED 306 (771)
Q Consensus 229 ~~~~l~~~~~~--~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 306 (771)
+.+.+ +... ..+..+.|||||+. |+|++...+. ....||++|+ ++
T Consensus 227 ~~~~l--~~~~~~~~~~~~~~spdg~~----l~~~~~~~~~----------~~~~l~~~d~-----------------~~ 273 (388)
T 3pe7_A 227 NMRKV--KTHAEGESCTHEFWVPDGSA----LVYVSYLKGS----------PDRFIYSADP-----------------ET 273 (388)
T ss_dssp CCEES--CCCCTTEEEEEEEECTTSSC----EEEEEEETTC----------CCEEEEEECT-----------------TT
T ss_pred ceEEe--eeCCCCcccccceECCCCCE----EEEEecCCCC----------CcceEEEEec-----------------CC
Confidence 88888 4433 34668899999999 9998854321 1125999998 77
Q ss_pred CcceecCCCCc------cccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCC
Q 004149 307 LPVVNLTESIS------SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEG 380 (771)
Q Consensus 307 ~~~~~lt~~~~------~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (771)
++.+.++...+ ....+.|||||++|+|...+.... ......+|+++|+.+++.++++......
T Consensus 274 g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~--~~~~~~~i~~~d~~~~~~~~l~~~~~~~--------- 342 (388)
T 3pe7_A 274 LENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGY--KIENDPFLYVFNMKNGTQHRVARHDTSW--------- 342 (388)
T ss_dssp CCEEEEEEECCEEEEEECTTSSEEEEEECCC--------------CCCCEEEEEETTTTEEEEEEECCCCC---------
T ss_pred CceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeecccc--ccCCCCEEEEEeccCCceEEeccccCcc---------
Confidence 77766654332 133458999999999976542100 0012467999999887654443221100
Q ss_pred CCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc
Q 004149 381 DCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 424 (771)
Q Consensus 381 ~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~ 424 (771)
..+.+-.......++|||||++|+|.+...+..+||.+++.++.
T Consensus 343 ~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~~~ 386 (388)
T 3pe7_A 343 KVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPESV 386 (388)
T ss_dssp CCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCGGG
T ss_pred cccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECChhc
Confidence 00000000024578999999999999988888999999986543
No 54
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=99.85 E-value=2.4e-21 Score=202.13 Aligned_cols=234 Identities=21% Similarity=0.211 Sum_probs=159.3
Q ss_pred ccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCCcchHHHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCCC
Q 004149 514 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGK 591 (771)
Q Consensus 514 ~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~-~~~~~~~~~~~la~-~G~~V~~~d~rG~~~~g~~~~~~~~~~ 591 (771)
...+| ++.+++|.|++ .++.|+||++|||++.. ....|...+..|++ .||.|+++||||.+++.
T Consensus 57 ~~~~g-~~~~~~~~P~~---~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~---------- 122 (313)
T 2wir_A 57 PGRGG-PIRARVYRPRD---GERLPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRLAPEHK---------- 122 (313)
T ss_dssp EETTE-EEEEEEEECSC---CSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHCCEEEEEECCCTTTSC----------
T ss_pred eCCCC-cEEEEEEecCC---CCCccEEEEECCCcccCCChHHHHHHHHHHHHHcCCEEEEeecCCCCCCC----------
Confidence 33445 89999999973 45679999999987432 24467778888887 49999999999965531
Q ss_pred ccccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHHhCCCc----eeEEEecCCccchhhhh-----cC
Q 004149 592 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMV-----GT 659 (771)
Q Consensus 592 ~~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~p~~~~~~~~-----~~ 659 (771)
.....+|+.++++++.+.. .+++++|+|+|+|+||.+++.++.++++. ++++|+.+|+.+..... ..
T Consensus 123 -~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~ 201 (313)
T 2wir_A 123 -FPAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTAIMARDRGESFVKYQVLIYPAVNLTGSPTVSRVEY 201 (313)
T ss_dssp -TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCCSSCCCHHHHHT
T ss_pred -CCchHHHHHHHHHHHHhHHHHhCCCcccEEEEEeCccHHHHHHHHHHhhhcCCCCceEEEEEcCccCCCCCCCcCHHHh
Confidence 1234788999999988752 25677999999999999999999887766 99999999987621100 00
Q ss_pred C--CCC--cchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCC
Q 004149 660 T--DIP--DWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGV 735 (771)
Q Consensus 660 ~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~ 735 (771)
. ... .......+. ..+.... . .......+|+...-+..+|+||++|+.|.++ .++..+++++++.|+
T Consensus 202 ~~~~~~~~~~~~~~~~~----~~~~~~~--~-~~~~~~~sp~~~~~~~~~P~lii~G~~D~~~--~~~~~~~~~l~~~g~ 272 (313)
T 2wir_A 202 SGPEYVILTADLMAWFG----RQYFSKP--Q-DALSPYASPIFADLSNLPPALVITAEYDPLR--DEGELYAHLLKTRGV 272 (313)
T ss_dssp CSGGGCSSCHHHHHHHH----HHHCSSG--G-GGGSTTTCGGGSCCTTCCCEEEEEEEECTTH--HHHHHHHHHHHHTTC
T ss_pred cccCCCccCHHHHHHHH----HHhCCCC--C-ccCCCccCcCcccccCCCcceEEEcCcCcCh--HHHHHHHHHHHHCCC
Confidence 0 000 000000000 0000000 0 0001122444211122369999999999988 578899999999999
Q ss_pred CEEEEEeCCCCccCCC----CCChHHHHHHHHHHHHHHhC
Q 004149 736 ETKVIVFPNDVHGIER----PQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 736 ~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~wl~~~l~ 771 (771)
+++++++++++|++.. .+...++++.+.+||+++++
T Consensus 273 ~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 312 (313)
T 2wir_A 273 RAVAVRYNGVIHGFVNFYPILEEGREAVSQIAASIKSMAV 312 (313)
T ss_dssp CEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHTTT
T ss_pred CEEEEEeCCCceecccccccCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999998763 23345788899999998764
No 55
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=99.85 E-value=2.1e-20 Score=183.96 Aligned_cols=199 Identities=11% Similarity=0.085 Sum_probs=150.7
Q ss_pred ccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC---CCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCC
Q 004149 514 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV---SLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG 590 (771)
Q Consensus 514 ~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~---~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~ 590 (771)
...+| ++.++++.|++. ..++.|+||++||++... ....|...+..|+++||.|+++|+||.+..... .
T Consensus 16 ~~~~g-~~~~~~~~p~~~-~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~------~ 87 (220)
T 2fuk_A 16 DGPVG-PLDVAVDLPEPD-VAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGS------F 87 (220)
T ss_dssp EETTE-EEEEEEECCCTT-SCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSC------C
T ss_pred eCCCC-eEEEEEEeCCCC-CccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCC------c
Confidence 34456 899999999731 014589999999964321 222356678889999999999999995543221 1
Q ss_pred CccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhh
Q 004149 591 KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 670 (771)
Q Consensus 591 ~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~ 670 (771)
.......+|+.++++++.++. +.++++++|||+||.+++.++.++ .++++|+.+|......
T Consensus 88 ~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~--------------- 148 (220)
T 2fuk_A 88 DHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD--------------- 148 (220)
T ss_dssp CTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC---------------
T ss_pred ccCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh---------------
Confidence 222345889999999999874 667999999999999999999887 7999999988754211
Q ss_pred ccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCC
Q 004149 671 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE 750 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 750 (771)
...+. ...|+|+++|++|..+|++.++++++.+. .+++++++++++|.+.
T Consensus 149 --------------------------~~~~~-~~~p~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~~H~~~ 198 (220)
T 2fuk_A 149 --------------------------FSDVQ-PPAQWLVIQGDADEIVDPQAVYDWLETLE---QQPTLVRMPDTSHFFH 198 (220)
T ss_dssp --------------------------CTTCC-CCSSEEEEEETTCSSSCHHHHHHHHTTCS---SCCEEEEETTCCTTCT
T ss_pred --------------------------hhhcc-cCCcEEEEECCCCcccCHHHHHHHHHHhC---cCCcEEEeCCCCceeh
Confidence 00011 15789999999999999999888887764 3589999999999987
Q ss_pred CCCChHHHHHHHHHHHHHHhC
Q 004149 751 RPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 751 ~~~~~~~~~~~i~~wl~~~l~ 771 (771)
. ...++.+.+.+||+++|+
T Consensus 199 ~--~~~~~~~~i~~~l~~~l~ 217 (220)
T 2fuk_A 199 R--KLIDLRGALQHGVRRWLP 217 (220)
T ss_dssp T--CHHHHHHHHHHHHGGGCS
T ss_pred h--hHHHHHHHHHHHHHHHhh
Confidence 5 355788999999998874
No 56
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=99.85 E-value=8.5e-21 Score=196.97 Aligned_cols=185 Identities=16% Similarity=0.189 Sum_probs=150.4
Q ss_pred EEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHH
Q 004149 523 AIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLT 602 (771)
Q Consensus 523 ~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~ 602 (771)
+.+|.|.. ..+.|+||++||++.. ...|...+..|+++||.|+++|+||.+.... ...+|+.+
T Consensus 85 ~~~~~p~~---~~~~p~vv~~HG~~~~--~~~~~~~~~~la~~G~~vv~~d~~g~g~s~~------------~~~~d~~~ 147 (306)
T 3vis_A 85 GTIYYPRE---NNTYGAIAISPGYTGT--QSSIAWLGERIASHGFVVIAIDTNTTLDQPD------------SRARQLNA 147 (306)
T ss_dssp EEEEEESS---CSCEEEEEEECCTTCC--HHHHHHHHHHHHTTTEEEEEECCSSTTCCHH------------HHHHHHHH
T ss_pred eEEEeeCC---CCCCCEEEEeCCCcCC--HHHHHHHHHHHHhCCCEEEEecCCCCCCCcc------------hHHHHHHH
Confidence 46777863 3378999999997654 3467778889999999999999999544321 23478889
Q ss_pred HHHHHHHc------CCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCC
Q 004149 603 AIDHVIDM------GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 676 (771)
Q Consensus 603 ~i~~l~~~------~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (771)
+++++.+. ..++.++++|+|||+||.+++.++.++|+ ++++|+.+|...
T Consensus 148 ~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~------------------------ 202 (306)
T 3vis_A 148 ALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL------------------------ 202 (306)
T ss_dssp HHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS------------------------
T ss_pred HHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC------------------------
Confidence 99999887 56788999999999999999999999887 889998877532
Q ss_pred CcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcH-HHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCCh
Q 004149 677 DSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVS-NGLQYARALREKGVETKVIVFPNDVHGIERPQSD 755 (771)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~-~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~ 755 (771)
...+.++++|+|+++|++|..+|++ +++.+++.++..+ +++++++++++|.+.....
T Consensus 203 --------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~-~~~~~~~~g~gH~~~~~~~- 260 (306)
T 3vis_A 203 --------------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPT-DKAYLELDGASHFAPNITN- 260 (306)
T ss_dssp --------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTS-CEEEEEETTCCTTGGGSCC-
T ss_pred --------------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCC-CceEEEECCCCccchhhch-
Confidence 1224567799999999999999998 6999999988766 8999999999998765443
Q ss_pred HHHHHHHHHHHHHHhC
Q 004149 756 FESFLNIGLWFKKYCK 771 (771)
Q Consensus 756 ~~~~~~i~~wl~~~l~ 771 (771)
.++.+.+.+||+++++
T Consensus 261 ~~~~~~i~~fl~~~l~ 276 (306)
T 3vis_A 261 KTIGMYSVAWLKRFVD 276 (306)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHcc
Confidence 5888999999999874
No 57
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=99.85 E-value=1.3e-20 Score=196.89 Aligned_cols=227 Identities=19% Similarity=0.203 Sum_probs=157.2
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCCcchHHHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCCCccccch
Q 004149 520 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV 597 (771)
Q Consensus 520 ~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~-~~~~~~~~~~~la~-~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~ 597 (771)
++.+++|.|.+ .++.|+||++|||++.. ....|...+..|++ .||.|+++||||.+++. ....+
T Consensus 76 ~i~~~iy~P~~---~~~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~-----------~p~~~ 141 (323)
T 3ain_A 76 NIKARVYYPKT---QGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENK-----------FPAAV 141 (323)
T ss_dssp EEEEEEEECSS---CSCCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC-----------TTHHH
T ss_pred eEEEEEEecCC---CCCCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCCCC-----------CcchH
Confidence 89999999973 45689999999987433 34467778888876 49999999999965531 12357
Q ss_pred hhHHHHHHHHHHcCC-C-CCCeEEEEEcChhHHHHHHHHHhCCCce---eEEEecCCccchhhhh----cCCCCCcc--h
Q 004149 598 NDVLTAIDHVIDMGL-A-NPSKVTVVGGSHGGFLTTHLIGQAPDKF---VAAAARNPLCNLALMV----GTTDIPDW--C 666 (771)
Q Consensus 598 ~D~~~~i~~l~~~~~-~-d~~ri~l~G~S~GG~~a~~~a~~~p~~~---~a~v~~~p~~~~~~~~----~~~~~~~~--~ 666 (771)
+|+.++++|+.++.. . |.++|+|+|+|+||.+++.++.+++++. +++|+.+|+.+..... .......+ .
T Consensus 142 ~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~l~~~ 221 (323)
T 3ain_A 142 VDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTRE 221 (323)
T ss_dssp HHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCSCCHHHHHHSSSSSSCHH
T ss_pred HHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCCCCccHHHhccCCCCCHH
Confidence 899999999987631 1 7889999999999999999998877665 8999999987632110 00000000 0
Q ss_pred hhhhccCCCCCcCCCCCChhhHHHHhhcCcccc-ccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCC
Q 004149 667 YVESYGSKGKDSFTESPSVEDLTRFHSKSPISH-ISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPND 745 (771)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~ 745 (771)
....+. ..+.... .. ......+|... +..+ +|+||++|+.|.++ .++..+++++++.|+++++++++++
T Consensus 222 ~~~~~~----~~~~~~~--~~-~~~~~~sp~~~~l~~l-~P~lii~G~~D~l~--~~~~~~a~~l~~ag~~~~~~~~~g~ 291 (323)
T 3ain_A 222 HIDWFG----QQYLRSF--AD-LLDFRFSPILADLNDL-PPALIITAEHDPLR--DQGEAYANKLLQSGVQVTSVGFNNV 291 (323)
T ss_dssp HHHHHH----HHHCSSG--GG-GGCTTTCGGGSCCTTC-CCEEEEEETTCTTH--HHHHHHHHHHHHTTCCEEEEEETTC
T ss_pred HHHHHH----HHhCCCC--cc-cCCcccCcccCcccCC-CHHHEEECCCCccH--HHHHHHHHHHHHcCCCEEEEEECCC
Confidence 000000 0000000 00 00012234332 2222 59999999999988 5788999999999999999999999
Q ss_pred CccCCCC----CChHHHHHHHHHHHHHHh
Q 004149 746 VHGIERP----QSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 746 ~H~~~~~----~~~~~~~~~i~~wl~~~l 770 (771)
+|++... +...++++.+.+||+++|
T Consensus 292 ~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 320 (323)
T 3ain_A 292 IHGFVSFFPFIEQGRDAIGLIGYVLRKVF 320 (323)
T ss_dssp CTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCcCHHHHHHHHHHHHHHHHHh
Confidence 9997642 334578899999999876
No 58
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=99.85 E-value=3.5e-20 Score=188.53 Aligned_cols=233 Identities=12% Similarity=0.162 Sum_probs=156.1
Q ss_pred cccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CCcch-HHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCC
Q 004149 513 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG 590 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~~~~-~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~ 590 (771)
+...+|.++.+.++.|. ..++.|+||++||+++... ...+. .....|++. |.|+++|+||.+..
T Consensus 8 ~~~~dg~~l~~~~~~p~---~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~---------- 73 (275)
T 3h04_A 8 VITKDAFALPYTIIKAK---NQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEV---------- 73 (275)
T ss_dssp EECTTSCEEEEEEECCS---SSSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTS----------
T ss_pred EecCCcEEEEEEEEccC---CCCCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCcc----------
Confidence 44567889999999987 4457899999999873222 22343 566677666 99999999985432
Q ss_pred CccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcc-----
Q 004149 591 KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDW----- 665 (771)
Q Consensus 591 ~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~----- 665 (771)
......+|+.++++++.++ ++.++++|+|||+||.+++.++.+ +.++++|+.+|..+.............
T Consensus 74 -~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (275)
T 3h04_A 74 -SLDCIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYYAKIAQ 148 (275)
T ss_dssp -CHHHHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHHHHHHT
T ss_pred -ccchhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccchhhcccc
Confidence 1123478999999999887 567899999999999999999998 789999999998765211100000000
Q ss_pred ----hhhhhccCCCCCcCCCCCChhhHHH-------------Hhh-------c-CccccccCCCCcEEEEeeCCCCccCc
Q 004149 666 ----CYVESYGSKGKDSFTESPSVEDLTR-------------FHS-------K-SPISHISKVKTPTIFLLGAQDLRVPV 720 (771)
Q Consensus 666 ----~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~-------~-sp~~~~~~i~~P~Lii~G~~D~~vp~ 720 (771)
.....+.. ............... +.. . .....+.+++ |+|+++|++|..+|+
T Consensus 149 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~~~~ 225 (275)
T 3h04_A 149 SINETMIAQLTS--PTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCNGDYDVPV 225 (275)
T ss_dssp TSCHHHHHTTSC--SSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETTCSSSCT
T ss_pred cchHHHHhcccC--CCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CEEEEecCCCCCCCh
Confidence 00000000 000000000000000 000 0 0111235666 999999999999999
Q ss_pred HHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCCh--HHHHHHHHHHHHHHhC
Q 004149 721 SNGLQYARALREKGVETKVIVFPNDVHGIERPQSD--FESFLNIGLWFKKYCK 771 (771)
Q Consensus 721 ~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~--~~~~~~i~~wl~~~l~ 771 (771)
+.+..+++.+. +.+++++++++|.+...... .++++.+.+||+++|.
T Consensus 226 ~~~~~~~~~~~----~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 226 EESEHIMNHVP----HSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp HHHHHHHTTCS----SEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcC----CceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 99888877654 47899999999998766554 6899999999999873
No 59
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=99.85 E-value=2.4e-21 Score=197.78 Aligned_cols=210 Identities=10% Similarity=0.095 Sum_probs=148.1
Q ss_pred CCCCCcEEEEEcCCCCCC---CCCcchHHHHHH----HHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHH
Q 004149 533 DCSCDPLIVVLHGGPHSV---SLSSYSKSLAFL----SSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAID 605 (771)
Q Consensus 533 ~~~~~p~vv~~HGg~~~~---~~~~~~~~~~~l----a~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~ 605 (771)
+.++.|+||++|||++.. ....|...+..| ++.||.|+++|||++++. .....++|+.++++
T Consensus 37 ~~~~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~-----------~~~~~~~d~~~~~~ 105 (273)
T 1vkh_A 37 SQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEI-----------TNPRNLYDAVSNIT 105 (273)
T ss_dssp CTTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTS-----------CTTHHHHHHHHHHH
T ss_pred CCCCCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCC-----------CCCcHHHHHHHHHH
Confidence 356789999999987543 234677778888 689999999999985432 11235789999999
Q ss_pred HHHHcCCCCCCeEEEEEcChhHHHHHHHHHhC-----------------CCceeEEEecCCccchhhhhcCCCCCcchhh
Q 004149 606 HVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-----------------PDKFVAAAARNPLCNLALMVGTTDIPDWCYV 668 (771)
Q Consensus 606 ~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-----------------p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~ 668 (771)
++.++ ++.++++|+|||+||.+++.++.++ |+.++++|+.+|+.+................
T Consensus 106 ~l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 183 (273)
T 1vkh_A 106 RLVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYDCFTR 183 (273)
T ss_dssp HHHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGGHHHHH
T ss_pred HHHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcccHHHHHH
Confidence 99887 4678999999999999999999885 7889999999998876543221100000000
Q ss_pred hhccCCCCCcCCCCCChhhHHHHhhcCccc--cccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCC
Q 004149 669 ESYGSKGKDSFTESPSVEDLTRFHSKSPIS--HISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDV 746 (771)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~--~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~ 746 (771)
..++. ....+. .... ..++.. ....+++|+|+++|++|.++|+++++.+++.+++.+.+++++++++++
T Consensus 184 ~~~~~-~~~~~~--~~~~------~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~g 254 (273)
T 1vkh_A 184 LAFPD-GIQMYE--EEPS------RVMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGL 254 (273)
T ss_dssp HHCTT-CGGGCC--CCHH------HHHHHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCS
T ss_pred HHhcc-cccchh--hccc------ccChhhhhcccccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCCCc
Confidence 11100 000000 0000 111110 122367999999999999999999999999999999999999999999
Q ss_pred ccCCCCCChHHHHHHHHHHH
Q 004149 747 HGIERPQSDFESFLNIGLWF 766 (771)
Q Consensus 747 H~~~~~~~~~~~~~~i~~wl 766 (771)
|.+.... .++.+.+.+||
T Consensus 255 H~~~~~~--~~~~~~i~~fl 272 (273)
T 1vkh_A 255 HNDVYKN--GKVAKYIFDNI 272 (273)
T ss_dssp GGGGGGC--HHHHHHHHHTC
T ss_pred ccccccC--hHHHHHHHHHc
Confidence 9875444 57777887775
No 60
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=99.85 E-value=3.7e-21 Score=200.56 Aligned_cols=228 Identities=18% Similarity=0.222 Sum_probs=161.5
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CCcchHHHHHHH-HCCcEEEEECCCCCCCCChhhhhcCC
Q 004149 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLP 589 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~~~~~~~~~la-~~G~~V~~~d~rG~~~~g~~~~~~~~ 589 (771)
++...+|.++.+++|.|.+ ++.|+||++|||++... ...+...+..|+ +.||.|+++|||+++++
T Consensus 64 ~i~~~~G~~i~~~~~~P~~----~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~--------- 130 (317)
T 3qh4_A 64 VVTGEAGRPVPVRIYRAAP----TPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEH--------- 130 (317)
T ss_dssp EEECTTSCEEEEEEEECSC----SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTS---------
T ss_pred EecCCCCCeEEEEEEecCC----CCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCC---------
Confidence 4455667789999999973 57899999999875432 345667777777 56999999999986653
Q ss_pred CCccccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHHhCCC----ceeEEEecCCccchhhhh---cC
Q 004149 590 GKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLALMV---GT 659 (771)
Q Consensus 590 ~~~~~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~p~----~~~a~v~~~p~~~~~~~~---~~ 659 (771)
.....++|+.++++|+.++ ..+|++||+|+|+|+||.+++.++.++++ .++++++.+|+++..... ..
T Consensus 131 --~~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~ 208 (317)
T 3qh4_A 131 --PYPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDRPTASRSEF 208 (317)
T ss_dssp --CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSSCCHHHHHT
T ss_pred --CCchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCCCCcCHHHh
Confidence 2234578999999999885 34788999999999999999999987554 489999999988753100 00
Q ss_pred CCCCcchhhhhccCCCCCcCCCCCChhhHHHHh-------hcCccccccCC--CCcEEEEeeCCCCccCcHHHHHHHHHH
Q 004149 660 TDIPDWCYVESYGSKGKDSFTESPSVEDLTRFH-------SKSPISHISKV--KTPTIFLLGAQDLRVPVSNGLQYARAL 730 (771)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~sp~~~~~~i--~~P~Lii~G~~D~~vp~~~~~~~~~~l 730 (771)
...+.+... . .......+. ..+|... ..+ -+|+||++|+.|.+++ ++..++++|
T Consensus 209 ~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~p~~~-~~l~~lpP~li~~G~~D~~~~--~~~~~a~~l 271 (317)
T 3qh4_A 209 RATPAFDGE-A-------------ASLMWRHYLAGQTPSPESVPGRR-GQLAGLPATLITCGEIDPFRD--EVLDYAQRL 271 (317)
T ss_dssp TTCSSSCHH-H-------------HHHHHHHHHTTCCCCTTTCGGGC-SCCTTCCCEEEEEEEESTTHH--HHHHHHHHH
T ss_pred cCCCCcCHH-H-------------HHHHHHHhcCCCCCCcccCCCcc-cccCCCCceeEEecCcCCCch--hHHHHHHHH
Confidence 000000000 0 000000111 1122211 112 2599999999999984 788999999
Q ss_pred HhCCCCEEEEEeCCCCccCCC----CCChHHHHHHHHHHHHHHhC
Q 004149 731 REKGVETKVIVFPNDVHGIER----PQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 731 ~~~g~~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~wl~~~l~ 771 (771)
++.|+++++++|++++|++.. .+...++++.+.+||+++|+
T Consensus 272 ~~~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 272 LGAGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp HHTTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred HHcCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 999999999999999998642 23456788999999999874
No 61
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=99.85 E-value=1.1e-21 Score=203.58 Aligned_cols=199 Identities=18% Similarity=0.206 Sum_probs=148.5
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhh
Q 004149 521 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVND 599 (771)
Q Consensus 521 l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D 599 (771)
+...+|.|+. ..++.|+||++|||++... ...+...+..|+++||.|+++|||++++.. .....+|
T Consensus 68 ~~~~~~~p~~--~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~-----------~~~~~~d 134 (303)
T 4e15_A 68 QLVDVFYSEK--TTNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVT-----------LEQLMTQ 134 (303)
T ss_dssp CEEEEEECTT--CCTTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSC-----------HHHHHHH
T ss_pred cEEEEEecCC--CCCCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCC-----------hhHHHHH
Confidence 4556778863 3567899999999875432 334566788899999999999999965432 1234789
Q ss_pred HHHHHHHHHHc-CCCCCCeEEEEEcChhHHHHHHHHHhCC-------CceeEEEecCCccchhhhhcCCCCCcchhhhhc
Q 004149 600 VLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAP-------DKFVAAAARNPLCNLALMVGTTDIPDWCYVESY 671 (771)
Q Consensus 600 ~~~~i~~l~~~-~~~d~~ri~l~G~S~GG~~a~~~a~~~p-------~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 671 (771)
+.++++++.+. ...+.++|+|+|||+||++++.++.+.+ +.++++|+.+|+.++..+...... + ....+
T Consensus 135 ~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~~~~~--~-~~~~~ 211 (303)
T 4e15_A 135 FTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSNLESV--N-PKNIL 211 (303)
T ss_dssp HHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHTCTTT--S-GGGTT
T ss_pred HHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhccccc--c-hhhhh
Confidence 99999999873 1246789999999999999999988653 279999999999887654331100 0 00000
Q ss_pred cCCCCCcCCCCCChhhHHHHhhcCcc-ccccCC----CCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCC
Q 004149 672 GSKGKDSFTESPSVEDLTRFHSKSPI-SHISKV----KTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDV 746 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~sp~-~~~~~i----~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~ 746 (771)
+ . ..+.+...+|+ ..+..+ ++|+||+||++|..+|+.+++++++++++.|.+++++++++++
T Consensus 212 ~---------~----~~~~~~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~g~~ 278 (303)
T 4e15_A 212 G---------L----NERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKGYD 278 (303)
T ss_dssp C---------C----CTTTTTTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEEEEEEEEE
T ss_pred c---------C----CHHHHHHcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEEEEeCCCC
Confidence 0 0 11234455666 556655 8999999999999999999999999999999999999999999
Q ss_pred cc
Q 004149 747 HG 748 (771)
Q Consensus 747 H~ 748 (771)
|.
T Consensus 279 H~ 280 (303)
T 4e15_A 279 HF 280 (303)
T ss_dssp TT
T ss_pred ch
Confidence 95
No 62
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=99.85 E-value=1.9e-20 Score=189.80 Aligned_cols=188 Identities=15% Similarity=0.158 Sum_probs=149.3
Q ss_pred EEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHH
Q 004149 522 EAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVL 601 (771)
Q Consensus 522 ~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~ 601 (771)
.+.++.|... +.++.|+||++||.+.. ...|...+..|+++||.|+++|+||.+.... ....|+.
T Consensus 40 ~~~l~~p~~~-~~~~~p~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~------------~~~~d~~ 104 (262)
T 1jfr_A 40 GGTIYYPTST-ADGTFGAVVISPGFTAY--QSSIAWLGPRLASQGFVVFTIDTNTTLDQPD------------SRGRQLL 104 (262)
T ss_dssp CEEEEEESCC-TTCCEEEEEEECCTTCC--GGGTTTHHHHHHTTTCEEEEECCSSTTCCHH------------HHHHHHH
T ss_pred ceeEEecCCC-CCCCCCEEEEeCCcCCC--chhHHHHHHHHHhCCCEEEEeCCCCCCCCCc------------hhHHHHH
Confidence 3567777642 24678999999997655 3467778889999999999999999543211 2356888
Q ss_pred HHHHHHHH----cCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCC
Q 004149 602 TAIDHVID----MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKD 677 (771)
Q Consensus 602 ~~i~~l~~----~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (771)
++++++.+ ...++.++++|+|||+||.+++.++.++|+ ++++|+.+|...
T Consensus 105 ~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~------------------------- 158 (262)
T 1jfr_A 105 SALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT------------------------- 158 (262)
T ss_dssp HHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS-------------------------
T ss_pred HHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc-------------------------
Confidence 89999987 333677899999999999999999999987 899998877421
Q ss_pred cCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHH-HHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChH
Q 004149 678 SFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSN-GLQYARALREKGVETKVIVFPNDVHGIERPQSDF 756 (771)
Q Consensus 678 ~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~-~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~ 756 (771)
...+.++++|+|+++|++|..++++. ++.+++.+.. +.+++++++++++|.+.... ..
T Consensus 159 -------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~H~~~~~~-~~ 217 (262)
T 1jfr_A 159 -------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPG-SLDKAYLELRGASHFTPNTS-DT 217 (262)
T ss_dssp -------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCT-TSCEEEEEETTCCTTGGGSC-CH
T ss_pred -------------------cccccccCCCEEEEecCccccCCchhhHHHHHHHhhc-CCCceEEEeCCCCcCCcccc-hH
Confidence 12345678999999999999999998 9999999843 56789999999999877544 35
Q ss_pred HHHHHHHHHHHHHhC
Q 004149 757 ESFLNIGLWFKKYCK 771 (771)
Q Consensus 757 ~~~~~i~~wl~~~l~ 771 (771)
++.+.+.+||+++++
T Consensus 218 ~~~~~i~~fl~~~l~ 232 (262)
T 1jfr_A 218 TIAKYSISWLKRFID 232 (262)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhc
Confidence 889999999999874
No 63
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=4.7e-20 Score=215.90 Aligned_cols=314 Identities=11% Similarity=0.039 Sum_probs=194.5
Q ss_pred EEEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCC-
Q 004149 44 WTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENE- 122 (771)
Q Consensus 44 ~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~- 122 (771)
...+..||||+.+ |+ + . .+.++++++.++ +..++.... ......+..++|||||++|||.......
T Consensus 19 ~~~~~~spdg~~~-~~-~-~-------dg~i~~~d~~~g--~~~~~~~~~-~~~~~~v~~~~~SpDg~~l~~~~~~~~~~ 85 (723)
T 1xfd_A 19 DPEAKWISDTEFI-YR-E-Q-------KGTVRLWNVETN--TSTVLIEGK-KIESLRAIRYEISPDREYALFSYNVEPIY 85 (723)
T ss_dssp CCCCCBSSSSCBC-CC-C-S-------SSCEEEBCGGGC--CCEEEECTT-TTTTTTCSEEEECTTSSEEEEEESCCCCS
T ss_pred ccccEEcCCCcEE-EE-e-C-------CCCEEEEECCCC--cEEEEeccc-cccccccceEEECCCCCEEEEEecCccce
Confidence 3455678899854 33 1 1 236788776443 333333221 0000136789999999999999765422
Q ss_pred ----CCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCC
Q 004149 123 ----SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNS 197 (771)
Q Consensus 123 ----~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (771)
...+++.+ .+++.+++...... . .....++|||||++|||++.
T Consensus 86 ~~~~~~~i~~~d~~~~~~~~l~~~~~~-~------~~~~~~~~SPdG~~la~~~~------------------------- 133 (723)
T 1xfd_A 86 QHSYTGYYVLSKIPHGDPQSLDPPEVS-N------AKLQYAGWGPKGQQLIFIFE------------------------- 133 (723)
T ss_dssp SSCCCSEEEEEESSSCCCEECCCTTCC-S------CCCSBCCBCSSTTCEEEEET-------------------------
T ss_pred eecceeeEEEEECCCCceEeccCCccc-c------ccccccEECCCCCEEEEEEC-------------------------
Confidence 24566555 45554444332111 0 11258999999999999742
Q ss_pred CCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCC-CC------------------ccceEEEecCCCCCccEE
Q 004149 198 WKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK-SL------------------SVGQVVWAPLNEGLHQYL 258 (771)
Q Consensus 198 ~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~-~~------------------~~~~~~wspDg~~~~~~l 258 (771)
..|+++|+.+++.++++ .. .. ....++|||||+. |
T Consensus 134 --------------------~~i~~~~~~~g~~~~~~--~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~----l 187 (723)
T 1xfd_A 134 --------------------NNIYYCAHVGKQAIRVV--STGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTR----L 187 (723)
T ss_dssp --------------------TEEEEESSSSSCCEEEE--CCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSE----E
T ss_pred --------------------CeEEEEECCCCceEEEe--cCCCCCceECcccceeEEEEeccCcceEEECCCCCE----E
Confidence 47999999999888873 22 11 1257999999999 9
Q ss_pred EEEeecCcceee---------------eeeee----ccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eecCCC---
Q 004149 259 VFVGWSSETRKL---------------GIKYC----YNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTES--- 315 (771)
Q Consensus 259 ~~~~~~~~~~~~---------------g~~~~----~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~--- 315 (771)
+|.+......+. ...+. .+....|+++|+ .+++. +.|+..
T Consensus 188 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~-----------------~~~~~~~~l~~~~~~ 250 (723)
T 1xfd_A 188 AYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGL-----------------NGPTHDLEMMPPDDP 250 (723)
T ss_dssp EEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEES-----------------SSSCCCEECCCCCCG
T ss_pred EEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEEC-----------------CCCceeEEeeCCccC
Confidence 998754321100 00000 012337999998 66663 666653
Q ss_pred ---CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCC
Q 004149 316 ---ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSIL 392 (771)
Q Consensus 316 ---~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~ 392 (771)
...+..+.|||||+.|++...+. .....|+++|+.+++...+..... ..... ....
T Consensus 251 ~~~~~~~~~~~~SpDg~~l~~~~~~~-------~~~~~i~~~d~~~g~~~~~~~~~~----------~~~~~----~~~~ 309 (723)
T 1xfd_A 251 RMREYYITMVKWATSTKVAVTWLNRA-------QNVSILTLCDATTGVCTKKHEDES----------EAWLH----RQNE 309 (723)
T ss_dssp GGSSEEEEEEEESSSSEEEEEEEETT-------SCEEEEEEEETTTCCEEEEEEEEC----------SSCCC----CCCC
T ss_pred CCccceeEEEEEeCCCeEEEEEEcCC-------CCeEEEEEEeCCCCcceEEEEecc----------CCEEe----ccCC
Confidence 44578899999999887776653 234679999998876533321110 00000 0013
Q ss_pred CCccccCCCEEEEE-eeeCC----eeEEEEEE-CCCCc---EEEecCCCCCce-eeEEeecCCEEEEEEeCCC-CCCeEE
Q 004149 393 SNPWLSDGCTMLLS-SIWGS----SQVIISVN-VSSGE---LLRITPAESNFS-WSLLTLDGDNIIAVSSSPV-DVPQVK 461 (771)
Q Consensus 393 ~~~~s~dg~~l~~~-~~~~~----~~~l~~~d-~~tg~---~~~l~~~~~~~~-~~~~s~d~~~l~~~~s~~~-~p~~l~ 461 (771)
.+.|||||+.|++. +..++ ..+||.+| ..+++ .+.++....... ...|++||+.|++...... .-..||
T Consensus 310 ~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 389 (723)
T 1xfd_A 310 EPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLY 389 (723)
T ss_dssp CCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEE
T ss_pred CceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEE
Confidence 67899999999887 54555 66899999 67777 777775443332 3579999999998876531 334566
Q ss_pred EEEec
Q 004149 462 YGYFV 466 (771)
Q Consensus 462 ~~~~~ 466 (771)
..++.
T Consensus 390 ~~~~~ 394 (723)
T 1xfd_A 390 SANTV 394 (723)
T ss_dssp EECSS
T ss_pred EEeCC
Confidence 66543
No 64
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=99.85 E-value=1e-20 Score=193.93 Aligned_cols=233 Identities=12% Similarity=0.067 Sum_probs=156.7
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchH---HHHHHHHCCcEEEEECCCCCCC-----------CC
Q 004149 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLG-----------FG 581 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~---~~~~la~~G~~V~~~d~rG~~~-----------~g 581 (771)
..|.++.+.+|.|+++.+.+++|+||++||++... ..|.. ....+++.||.|+++|.++.+. .|
T Consensus 24 ~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~g 101 (280)
T 3ls2_A 24 STHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTD--ENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQG 101 (280)
T ss_dssp TTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCS--HHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSSTT
T ss_pred hcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCCh--hhhhcchhHHHHHhhCCeEEEEeCCcccccccccccccccccC
Confidence 35778999999999776678899999999977653 23332 3456678899999999764221 12
Q ss_pred hhhhhcCCC-Cc-cccc-hhhHH-HHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhh
Q 004149 582 EEALQSLPG-KV-GSQD-VNDVL-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV 657 (771)
Q Consensus 582 ~~~~~~~~~-~~-~~~~-~~D~~-~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~ 657 (771)
..+...... .+ .... ...+. +.+.++.+...+ .+|++|+|||+||++|+.++.++|++|+++++.+|+++.....
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~~ 180 (280)
T 3ls2_A 102 AGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPV-TSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVNPINCP 180 (280)
T ss_dssp CCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSCGGGSH
T ss_pred CccccccccccccccccHHHHHHHHHHHHHHhhCCC-CCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccCcccCc
Confidence 221111110 00 0001 12222 334455444333 4899999999999999999999999999999999987643211
Q ss_pred cCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCC----CCcEEEEeeCCCCccCcHH-HHHHHHHHHh
Q 004149 658 GTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV----KTPTIFLLGAQDLRVPVSN-GLQYARALRE 732 (771)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i----~~P~Lii~G~~D~~vp~~~-~~~~~~~l~~ 732 (771)
.. ...+...++. ....+...+|...+.++ .+|+|++||+.|.+++... +++++++|++
T Consensus 181 ~~----~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~ 243 (280)
T 3ls2_A 181 WG----VKAFTGYLGA-------------DKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLDEQLKPQNLVAVAKQ 243 (280)
T ss_dssp HH----HHHHHHHHCS-------------CGGGTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCCCCCCHHHHHHHHHH
T ss_pred ch----hhHHHhhcCc-------------hHHHHHhcCHHHHHHhccccCCCcEEEEEeCCCcccCCchhHHHHHHHHHH
Confidence 00 0000011110 11233345565555555 4599999999999998744 8899999999
Q ss_pred CCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 733 KGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 733 ~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
.|+++++.++|+++|.+. .....+..+++|+.++|+
T Consensus 244 ~g~~~~~~~~~g~~H~~~---~~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 244 KDYPLTLEMQTGYDHSYF---FISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp HTCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHC
T ss_pred hCCCceEEEeCCCCCchh---hHHHHHHHHHHHHHHHhc
Confidence 999999999999999864 234567889999999885
No 65
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=99.85 E-value=4.6e-21 Score=202.25 Aligned_cols=234 Identities=17% Similarity=0.180 Sum_probs=154.5
Q ss_pred ceEEEEEEecCCC-CCCCCCcEEEEEcCCCCCCCCCc---chHHHHHHH-HCCcEEEEECCCCCCCCChhhhhcCCCCcc
Q 004149 519 KPFEAIFVSSSHK-KDCSCDPLIVVLHGGPHSVSLSS---YSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 519 ~~l~~~~~~P~~~-~~~~~~p~vv~~HGg~~~~~~~~---~~~~~~~la-~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~ 593 (771)
..+.+.+|.|++. .+.++.|+||++|||++...... |...+..|+ +.||.|+++||||.+++. .
T Consensus 64 ~~~~~~~~~P~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~-----------~ 132 (338)
T 2o7r_A 64 HNTFVRLFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHR-----------L 132 (338)
T ss_dssp TTEEEEEEEEGGGGGSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTC-----------T
T ss_pred CCeEEEEEeCCCCCcCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCC-----------C
Confidence 4467778888753 23578899999999886543322 667778887 789999999999965431 1
Q ss_pred ccchhhHHHHHHHHHHcC------CCCCCeEEEEEcChhHHHHHHHHHhCCC--------ceeEEEecCCccchhhhhc-
Q 004149 594 SQDVNDVLTAIDHVIDMG------LANPSKVTVVGGSHGGFLTTHLIGQAPD--------KFVAAAARNPLCNLALMVG- 658 (771)
Q Consensus 594 ~~~~~D~~~~i~~l~~~~------~~d~~ri~l~G~S~GG~~a~~~a~~~p~--------~~~a~v~~~p~~~~~~~~~- 658 (771)
...++|+.++++|+.++. .+|.++++|+|||+||.+++.++.++|+ +++++|+.+|+.+......
T Consensus 133 ~~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~ 212 (338)
T 2o7r_A 133 PAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGS 212 (338)
T ss_dssp THHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHH
T ss_pred chHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChh
Confidence 235789999999998762 1566899999999999999999998887 8999999999865321100
Q ss_pred ---CCCCCc--chh----hhhccCCCCCcCCCCCChhhHHHHhhcCc---cccccCCCCcEEEEeeCCCCccCcHHHHHH
Q 004149 659 ---TTDIPD--WCY----VESYGSKGKDSFTESPSVEDLTRFHSKSP---ISHISKVKTPTIFLLGAQDLRVPVSNGLQY 726 (771)
Q Consensus 659 ---~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~sp---~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~ 726 (771)
....+. ... ...+....... ..+. ...+...++ +..+..+.+|+|+++|++|.+++ .+.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~~D~~~~--~~~~~ 285 (338)
T 2o7r_A 213 ELRLANDSRLPTFVLDLIWELSLPMGADR--DHEY---CNPTAESEPLYSFDKIRSLGWRVMVVGCHGDPMID--RQMEL 285 (338)
T ss_dssp HHHTTTCSSSCHHHHHHHHHHHSCTTCCT--TSTT---TCCC----CCTHHHHHHHHTCEEEEEEETTSTTHH--HHHHH
T ss_pred hhccCCCcccCHHHHHHHHHHhCCCCCCC--CCcc---cCCCCCCcccccHhhhcCCCCCEEEEECCCCcchH--HHHHH
Confidence 000000 000 00000000000 0000 000000011 11223355699999999999986 56788
Q ss_pred HHHHHhCCCCEEEEEeCCCCccCCCC--CChHHHHHHHHHHHHHHh
Q 004149 727 ARALREKGVETKVIVFPNDVHGIERP--QSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 727 ~~~l~~~g~~~~~~~~~~~~H~~~~~--~~~~~~~~~i~~wl~~~l 770 (771)
+++|++.+.+++++++++++|.+... +...++++.+.+||++++
T Consensus 286 ~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~ 331 (338)
T 2o7r_A 286 AERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSC 331 (338)
T ss_dssp HHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999987532 333678899999998775
No 66
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=99.85 E-value=2.7e-20 Score=194.67 Aligned_cols=222 Identities=18% Similarity=0.189 Sum_probs=153.4
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-CcchHHHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~-~~~~~~~~~la~-~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
+|.++ |.|++ .....++||++|||++.... ..+...+..|++ .||.|+++|||+.+++. ..
T Consensus 66 ~g~~~----~~p~~--~~~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~-----------~~ 128 (322)
T 3k6k_A 66 GGVPC----IRQAT--DGAGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENP-----------FP 128 (322)
T ss_dssp TTEEE----EEEEC--TTCCSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTSC-----------TT
T ss_pred CCEeE----EecCC--CCCCCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCCC-----------Cc
Confidence 45555 45653 22333459999998754332 345566777775 49999999999865431 23
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCc----eeEEEecCCccchhhhhcCCCCCcchhhhh
Q 004149 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGTTDIPDWCYVES 670 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~ 670 (771)
..++|+.++++|+.++ .+++++|+|+|+|+||.+++.++.++++. ++++|+.+|+.+...... .+...
T Consensus 129 ~~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~-------~~~~~ 200 (322)
T 3k6k_A 129 AAVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRW-------SNSNL 200 (322)
T ss_dssp HHHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCSH-------HHHHT
T ss_pred hHHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCcc-------chhhc
Confidence 4589999999999988 46889999999999999999999887654 899999999887532100 00000
Q ss_pred ccCCCCCcCCCCCChhhH----HH--------HhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEE
Q 004149 671 YGSKGKDSFTESPSVEDL----TR--------FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 738 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~----~~--------~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~ 738 (771)
... ... ...... .. ....+|+.......+|+||++|++|.++ .++..++++|++.|++++
T Consensus 201 ~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~ 272 (322)
T 3k6k_A 201 ADR---DFL---AEPDTLGEMSELYVGGEDRKNPLISPVYADLSGLPEMLIHVGSEEALL--SDSTTLAERAGAAGVSVE 272 (322)
T ss_dssp GGG---CSS---SCHHHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEESSCTTH--HHHHHHHHHHHHTTCCEE
T ss_pred cCC---CCc---CCHHHHHHHHHHhcCCCCCCCCcCCcccccccCCCcEEEEECCcCccH--HHHHHHHHHHHHCCCCEE
Confidence 000 000 000000 00 0123444433334479999999999885 788999999999999999
Q ss_pred EEEeCCCCccCCCC----CChHHHHHHHHHHHHHHhC
Q 004149 739 VIVFPNDVHGIERP----QSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 739 ~~~~~~~~H~~~~~----~~~~~~~~~i~~wl~~~l~ 771 (771)
+++|++++|.+... +...++++.+.+||+++|+
T Consensus 273 l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (322)
T 3k6k_A 273 LKIWPDMPHVFQMYGKFVNAADISIKEICHWISARIS 309 (322)
T ss_dssp EEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCccccccccccChHHHHHHHHHHHHHHHHHh
Confidence 99999999987532 2355788999999998874
No 67
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=99.85 E-value=1.5e-20 Score=203.28 Aligned_cols=238 Identities=15% Similarity=0.205 Sum_probs=159.7
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHH-HHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 595 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~-~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~ 595 (771)
+|..+.++++.+ +.++.|+||++||++.. ...+.... ..+.++||.|+++|+||.+. +..... .....
T Consensus 143 ~~~~l~~~~~~~----~~~~~p~vv~~HG~~~~--~~~~~~~~~~~~~~~g~~vi~~D~~G~G~---s~~~~~--~~~~~ 211 (405)
T 3fnb_A 143 EGELLPGYAIIS----EDKAQDTLIVVGGGDTS--REDLFYMLGYSGWEHDYNVLMVDLPGQGK---NPNQGL--HFEVD 211 (405)
T ss_dssp TTEEEEEEEECC----SSSCCCEEEEECCSSCC--HHHHHHHTHHHHHHTTCEEEEECCTTSTT---GGGGTC--CCCSC
T ss_pred CCeEEEEEEEcC----CCCCCCEEEEECCCCCC--HHHHHHHHHHHHHhCCcEEEEEcCCCCcC---CCCCCC--CCCcc
Confidence 467899988843 34456999999996543 23343333 35668999999999999544 322111 22223
Q ss_pred chhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcC-----CCCCcchhhhh
Q 004149 596 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT-----TDIPDWCYVES 670 (771)
Q Consensus 596 ~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~-----~~~~~~~~~~~ 670 (771)
..+|+.++++++..+. ++|+|+|||+||++++.++.++| +++++|+.+|+.++...... ...+.+.. ..
T Consensus 212 ~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~~~~~~~~p~~~~-~~ 285 (405)
T 3fnb_A 212 ARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRISFSTALKAPKTIL-KW 285 (405)
T ss_dssp THHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHHCC-------------
T ss_pred HHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHhhhhhhhCcHHHH-HH
Confidence 4788888888886553 78999999999999999999988 89999999999887543211 00111000 00
Q ss_pred ccCCC--------------CCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCC
Q 004149 671 YGSKG--------------KDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE 736 (771)
Q Consensus 671 ~~~~~--------------~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~ 736 (771)
+.... ...+...........+....+...+.++++|+|+++|++|..+|++++..+++.+++.+.+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l~~~~~~ 365 (405)
T 3fnb_A 286 GSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGID 365 (405)
T ss_dssp ------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCCCcCCChHHHHHHHHHhccCCCC
Confidence 00000 0000000011111223333444447889999999999999999999999999999999899
Q ss_pred EEEEEeCCCCccCC--CCCChHHHHHHHHHHHHHHhC
Q 004149 737 TKVIVFPNDVHGIE--RPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 737 ~~~~~~~~~~H~~~--~~~~~~~~~~~i~~wl~~~l~ 771 (771)
++++++++..|... ..+....+.+.+.+||+++|+
T Consensus 366 ~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~ 402 (405)
T 3fnb_A 366 VTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFK 402 (405)
T ss_dssp EEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC
T ss_pred ceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhC
Confidence 99999977666522 355667888999999999874
No 68
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=99.85 E-value=1.1e-20 Score=196.92 Aligned_cols=232 Identities=17% Similarity=0.223 Sum_probs=157.3
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCCcchHHHHHHHHC-CcEEEEECCCCCCCCChhhhhcCCCCc
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLPGKV 592 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~-~~~~~~~~~~~la~~-G~~V~~~d~rG~~~~g~~~~~~~~~~~ 592 (771)
..+| .+.+++|.|.+ ..+.|+||++||+++.. ....|...+..|+++ ||.|+++||||.+++.
T Consensus 55 ~~~g-~i~~~~~~p~~---~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~----------- 119 (311)
T 2c7b_A 55 VSGG-SIRARVYFPKK---AAGLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYK----------- 119 (311)
T ss_dssp ETTE-EEEEEEEESSS---CSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCTTTSC-----------
T ss_pred CCCC-cEEEEEEecCC---CCCCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCCCCCC-----------
Confidence 3445 89999999973 34579999999987432 234677788888875 9999999999965531
Q ss_pred cccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHHhCCC----ceeEEEecCCccchhh--------hh
Q 004149 593 GSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLAL--------MV 657 (771)
Q Consensus 593 ~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~p~----~~~a~v~~~p~~~~~~--------~~ 657 (771)
.....+|+.++++++.+.. .+|+++++|+|||+||.+++.++.++|+ .++++|+.+|+.++.. +.
T Consensus 120 ~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~ 199 (311)
T 2c7b_A 120 FPTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGVPTASLVEFG 199 (311)
T ss_dssp TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSCCCHHHHHHH
T ss_pred CCccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccccccCCccHH
Confidence 1234788999999988752 3677899999999999999999987765 5899999999876310 00
Q ss_pred cCCCCC-cchhhhhccCCCCCcCCCCCChhhHHHHhhcCcccc-ccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCC
Q 004149 658 GTTDIP-DWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISH-ISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGV 735 (771)
Q Consensus 658 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~ 735 (771)
...... .......+. ..+..... . ......+|... +..+ +|+|+++|+.|.+++ ++..+++.++..+.
T Consensus 200 ~~~~~~~~~~~~~~~~----~~~~~~~~--~-~~~~~~~p~~~~l~~~-~P~lii~G~~D~~~~--~~~~~~~~l~~~g~ 269 (311)
T 2c7b_A 200 VAETTSLPIELMVWFG----RQYLKRPE--E-AYDFKASPLLADLGGL-PPALVVTAEYDPLRD--EGELYAYKMKASGS 269 (311)
T ss_dssp HCTTCSSCHHHHHHHH----HHHCSSTT--G-GGSTTTCGGGSCCTTC-CCEEEEEETTCTTHH--HHHHHHHHHHHTTC
T ss_pred HhccCCCCHHHHHHHH----HHhCCCCc--c-ccCcccCcccccccCC-CcceEEEcCCCCchH--HHHHHHHHHHHCCC
Confidence 000000 000000000 00000000 0 00112233322 2333 499999999999984 66788899999999
Q ss_pred CEEEEEeCCCCccCCC----CCChHHHHHHHHHHHHHHhC
Q 004149 736 ETKVIVFPNDVHGIER----PQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 736 ~~~~~~~~~~~H~~~~----~~~~~~~~~~i~~wl~~~l~ 771 (771)
+++++++++++|.+.. .+...++++.+.+||+++++
T Consensus 270 ~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 270 RAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp CEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred CEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999998762 23346788999999998874
No 69
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=99.85 E-value=1.9e-20 Score=212.67 Aligned_cols=254 Identities=14% Similarity=0.175 Sum_probs=172.5
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCC-----CCC-CcchHH---H-HHHHHCCcEEEEECCCCCCCCC
Q 004149 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHS-----VSL-SSYSKS---L-AFLSSVGYSLLIVNYRGSLGFG 581 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~-----~~~-~~~~~~---~-~~la~~G~~V~~~d~rG~~~~g 581 (771)
.+...||.+|.+++|.|++ .++.|+||++||.+.. ... ..|... . +.|+++||+|+.+|+||+++++
T Consensus 41 ~i~~~DG~~L~~~l~~P~~---~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~ 117 (652)
T 2b9v_A 41 MVPMRDGVKLYTVIVIPKN---ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQ 117 (652)
T ss_dssp EEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCC
T ss_pred EEECCCCcEEEEEEEecCC---CCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCC
Confidence 3445688999999999984 3678999999973321 111 111111 2 7899999999999999998887
Q ss_pred hhhhhcC--CCCcc---ccchhhHHHHHHHHHHc-CCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhh
Q 004149 582 EEALQSL--PGKVG---SQDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 655 (771)
Q Consensus 582 ~~~~~~~--~~~~~---~~~~~D~~~~i~~l~~~-~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~ 655 (771)
..+.... ...++ ..+.+|+.++++||.++ +..+ .||+|+|+|+||++++.++.++++.++++|+.+|+.++..
T Consensus 118 g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d~~~ 196 (652)
T 2b9v_A 118 GDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDGWM 196 (652)
T ss_dssp SCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCTTT
T ss_pred CcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEEEEeccccccccc
Confidence 6653221 11122 36789999999999998 7666 6999999999999999999888999999999999888532
Q ss_pred --hh---cCCCCC--cchhhhhcc-CCCC-------CcC---C---------------CCCChh-------hHHHHhhcC
Q 004149 656 --MV---GTTDIP--DWCYVESYG-SKGK-------DSF---T---------------ESPSVE-------DLTRFHSKS 695 (771)
Q Consensus 656 --~~---~~~~~~--~~~~~~~~~-~~~~-------~~~---~---------------~~~~~~-------~~~~~~~~s 695 (771)
.. +..... .|....... .... ..+ . ..+.+. ..+.|...|
T Consensus 197 ~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~yw~~~S 276 (652)
T 2b9v_A 197 GDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHAHPAYDAFWQGQA 276 (652)
T ss_dssp BSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHHCCSSSHHHHTTC
T ss_pred ccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHhCCCCChHHhcCC
Confidence 10 100000 010000000 0000 000 0 000000 012345678
Q ss_pred ccccccC--CCCcEEEEeeCCCCccCcHHHHHHHHHHHhCC--CCEEEEEeCCCCccCCC-----C------CC--hHHH
Q 004149 696 PISHISK--VKTPTIFLLGAQDLRVPVSNGLQYARALREKG--VETKVIVFPNDVHGIER-----P------QS--DFES 758 (771)
Q Consensus 696 p~~~~~~--i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g--~~~~~~~~~~~~H~~~~-----~------~~--~~~~ 758 (771)
|..++++ |++|+|++||..|.+ +..++.+++++|+.++ +++++++.|. +|+... . .. ....
T Consensus 277 p~~~~~~~~I~~PvLiv~G~~D~~-~~~~~~~~~~aL~~~g~~~~~~lvigp~-~H~~~~~~~~~~~~~~f~~~~~~~~~ 354 (652)
T 2b9v_A 277 LDKILAQRKPTVPMLWEQGLWDQE-DMWGAIHAWQALKDADVKAPNTLVMGPW-RHSGVNYNGSTLGPLEFEGDTAHQYR 354 (652)
T ss_dssp HHHHHHHHCCCSCEEEEEETTCSS-CSSHHHHHHHHHHHTTCSSCEEEEEESC-CTTGGGSCCSEETTEECSSCHHHHHH
T ss_pred hhhhhhcCCCCCCEEEEeecCCcc-ccccHHHHHHHHHhcCCCCCCEEEECCC-CCCCcccccccCCccccccccchhhh
Confidence 8888999 999999999999997 6688999999999998 8899999887 697521 1 11 1223
Q ss_pred HHHHHHHHHHHhC
Q 004149 759 FLNIGLWFKKYCK 771 (771)
Q Consensus 759 ~~~i~~wl~~~l~ 771 (771)
.+.+++||++|||
T Consensus 355 ~~~~~~wfd~~Lk 367 (652)
T 2b9v_A 355 RDVFRPFFDEYLK 367 (652)
T ss_dssp HHTHHHHHHHHHS
T ss_pred hhHHHHHHHHHhC
Confidence 6788999999996
No 70
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=99.85 E-value=4.5e-20 Score=187.42 Aligned_cols=239 Identities=16% Similarity=0.184 Sum_probs=153.0
Q ss_pred ccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcc
Q 004149 514 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 514 ~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~ 593 (771)
...+|..+.+..+.+. ....|+||++||++.......+......|+++||.|+++|+||.+..... ..
T Consensus 18 ~~~~g~~l~~~~~~~~----~~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~--------~~ 85 (270)
T 3llc_A 18 QGSDARSIAALVRAPA----QDERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGA--------FR 85 (270)
T ss_dssp SGGGCEEEEEEEECCS----STTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSC--------GG
T ss_pred eccCcceEEEEeccCC----CCCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCc--------cc
Confidence 3456788887766654 22469999999977653322234467778889999999999995544221 11
Q ss_pred ccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHh---CC---CceeEEEecCCccchhhhhcCCCCCcch-
Q 004149 594 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ---AP---DKFVAAAARNPLCNLALMVGTTDIPDWC- 666 (771)
Q Consensus 594 ~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~---~p---~~~~a~v~~~p~~~~~~~~~~~~~~~~~- 666 (771)
...++++.+.+..+++. +..++++|+|||+||.+++.++.+ +| ++++++|+.+|..+..............
T Consensus 86 ~~~~~~~~~d~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~~~~~~~~~~ 163 (270)
T 3llc_A 86 DGTISRWLEEALAVLDH--FKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLIEPLLGDRER 163 (270)
T ss_dssp GCCHHHHHHHHHHHHHH--HCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTTGGGCCHHHH
T ss_pred cccHHHHHHHHHHHHHH--hccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhhhhhhhhhhh
Confidence 22333433333333332 125799999999999999999999 99 8999999999987654422111111000
Q ss_pred --hhhhccCCCCCcCCCCC---ChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEE
Q 004149 667 --YVESYGSKGKDSFTESP---SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV 741 (771)
Q Consensus 667 --~~~~~~~~~~~~~~~~~---~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 741 (771)
+...........+...+ ................+.++++|+|+++|++|..+|++.++.+++.+.. .++++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~--~~~~~~~ 241 (270)
T 3llc_A 164 AELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHLPA--DDVVLTL 241 (270)
T ss_dssp HHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHTSCS--SSEEEEE
T ss_pred hhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHhcCC--CCeeEEE
Confidence 00000000000011111 1122233334444566788899999999999999999998888877654 3489999
Q ss_pred eCCCCccCCCCCChHHHHHHHHHHHHH
Q 004149 742 FPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 742 ~~~~~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
+++++|.+...+...++.+.+.+||++
T Consensus 242 ~~~~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 242 VRDGDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp ETTCCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred eCCCcccccccccHHHHHHHHHHHhcC
Confidence 999999876556566777788888764
No 71
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=99.84 E-value=1e-20 Score=193.68 Aligned_cols=233 Identities=10% Similarity=0.026 Sum_probs=157.3
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchH---HHHHHHHCCcEEEEECCCCCCCCChhh--------
Q 004149 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLGFGEEA-------- 584 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~---~~~~la~~G~~V~~~d~rG~~~~g~~~-------- 584 (771)
..|.++.+.+|.|++.. .++.|+||++||++... ..|.. ....+.+.||.|+++|+||.+......
T Consensus 24 ~~g~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g~ 100 (278)
T 3e4d_A 24 TLKSEMTFAVYVPPKAI-HEPCPVVWYLSGLTCTH--ANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGK 100 (278)
T ss_dssp TTTEEEEEEEEECGGGG-TSCEEEEEEECCTTCCS--HHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSBT
T ss_pred ccCCcceEEEEcCCCCC-CCCCCEEEEEcCCCCCc--cchhhcccHHHHHhhCCeEEEecCCcccCcccccccccccccC
Confidence 35788999999998543 67889999999977653 23433 344566779999999999854321110
Q ss_pred ----hhcCCC-C-ccccchh-hHH-HHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhh
Q 004149 585 ----LQSLPG-K-VGSQDVN-DVL-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM 656 (771)
Q Consensus 585 ----~~~~~~-~-~~~~~~~-D~~-~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~ 656 (771)
...... . ....... .+. +.++++.+...+|+++++|+|||+||++++.++.++|++++++++.+|+++....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~ 180 (278)
T 3e4d_A 101 GAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVAPSSA 180 (278)
T ss_dssp TBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCSCGGGC
T ss_pred CccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCcccccCC
Confidence 000000 0 0001112 222 3556666665577799999999999999999999999999999999998764321
Q ss_pred hcCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCC--CCcEEEEeeCCCCccCcHH-HHHHHHHHHhC
Q 004149 657 VGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV--KTPTIFLLGAQDLRVPVSN-GLQYARALREK 733 (771)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i--~~P~Lii~G~~D~~vp~~~-~~~~~~~l~~~ 733 (771)
.. ....+...++. ....+...+|...+.++ .+|+||+||+.|.++|... ++.+++.|++.
T Consensus 181 ~~----~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~ 243 (278)
T 3e4d_A 181 DW----SEPALEKYLGA-------------DRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIKGT 243 (278)
T ss_dssp TT----THHHHHHHHCS-------------CGGGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHHHHTCTHHHHHHHTTS
T ss_pred cc----chhhHHHhcCC-------------cHHHHHhcChhhHhhcCCCCCcEEEEecCCCcccccchhHHHHHHHHHHc
Confidence 10 00001111111 11223344555555544 4699999999999998432 68899999999
Q ss_pred CCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 734 GVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 734 g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
|+++++.++++++|.+. .....+.+++.|+.++|+
T Consensus 244 g~~~~~~~~~g~~H~~~---~~~~~~~~~l~~~~~~l~ 278 (278)
T 3e4d_A 244 DIGLTLRMHDRYDHSYY---FISTFMDDHLKWHAERLG 278 (278)
T ss_dssp SCEEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHC
T ss_pred CCCceEEEeCCCCcCHH---HHHHHHHHHHHHHHHhcC
Confidence 99999999999999763 123567889999999885
No 72
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=99.84 E-value=3.5e-21 Score=187.01 Aligned_cols=188 Identities=14% Similarity=0.122 Sum_probs=132.0
Q ss_pred CCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHH---c
Q 004149 534 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVID---M 610 (771)
Q Consensus 534 ~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~---~ 610 (771)
.+..++||++||.+.+ ...|...++.|...|+.|++|+.+|...|+..+..... .....+++..+.++.+++ .
T Consensus 19 ~~a~~~Vv~lHG~G~~--~~~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~ 94 (210)
T 4h0c_A 19 QRAKKAVVMLHGRGGT--AADIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQ--QNQPALDSALALVGEVVAEIEA 94 (210)
T ss_dssp TTCSEEEEEECCTTCC--HHHHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCGG--GGTTHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcEEEEEeCCCCC--HHHHHHHHHHhCCCCeEEEeecCCCCCccccccCCCcc--cchHHHHHHHHHHHHHHHHHHH
Confidence 4557899999995543 23454556667778999999999876544333211111 111123333333333322 2
Q ss_pred CCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCCcCCCCCChhhHHH
Q 004149 611 GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTR 690 (771)
Q Consensus 611 ~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (771)
..++++||+|+|+|+||++++.++.++|++++++++.++.+..... ...
T Consensus 95 ~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~---------------------------~~~---- 143 (210)
T 4h0c_A 95 QGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQEL---------------------------AIG---- 143 (210)
T ss_dssp TTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSC---------------------------CGG----
T ss_pred hCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhh---------------------------hhh----
Confidence 3489999999999999999999999999999999988874310000 000
Q ss_pred HhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004149 691 FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 691 ~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 767 (771)
.......++|+|++||++|++||++.++++++.|++.|.+++++.||+.+|.+. .+.++.+.+||.
T Consensus 144 ------~~~~~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~-----~~el~~i~~wL~ 209 (210)
T 4h0c_A 144 ------NYKGDFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTIS-----GDEIQLVNNTIL 209 (210)
T ss_dssp ------GCCBCCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSCC-----HHHHHHHHHTTT
T ss_pred ------hhhhhccCCceEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCcC-----HHHHHHHHHHHc
Confidence 000112257999999999999999999999999999999999999999999885 345677888875
No 73
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=99.84 E-value=1.6e-20 Score=199.68 Aligned_cols=243 Identities=17% Similarity=0.144 Sum_probs=160.1
Q ss_pred cccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CC--cchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCC
Q 004149 513 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LS--SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP 589 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~--~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~ 589 (771)
+...+|..+.+.+|.|.+. .++.|+||++|||++... .. .|...+..|+++||.|+++||||.+++..
T Consensus 87 ~~~~~g~~l~~~v~~p~~~--~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~------- 157 (361)
T 1jkm_A 87 ILGVDGNEITLHVFRPAGV--EGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEG------- 157 (361)
T ss_dssp EECTTSCEEEEEEEEETTC--CSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTE-------
T ss_pred eecCCCCeEEEEEEeCCCC--CCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCC-------
Confidence 3445666899999999742 237899999999874432 23 46667888888999999999999653321
Q ss_pred CCccccchhhHHHHHHHHHHcC-CCCCCeEEEEEcChhHHHHHHHHHh-----CCCceeEEEecCCccchhhhhc----C
Q 004149 590 GKVGSQDVNDVLTAIDHVIDMG-LANPSKVTVVGGSHGGFLTTHLIGQ-----APDKFVAAAARNPLCNLALMVG----T 659 (771)
Q Consensus 590 ~~~~~~~~~D~~~~i~~l~~~~-~~d~~ri~l~G~S~GG~~a~~~a~~-----~p~~~~a~v~~~p~~~~~~~~~----~ 659 (771)
.........|+.++++|+.++. ..+.++|+|+|||+||.+++.++.. +|++++++|+.+|+.+...... .
T Consensus 158 ~~~~~~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~~~~~~ 237 (361)
T 1jkm_A 158 HHPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRL 237 (361)
T ss_dssp ECCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHH
T ss_pred CCCCCccHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCcccccccccccccc
Confidence 1122345789999999998762 0122399999999999999999987 7878999999999876510000 0
Q ss_pred CCCCcchhhhhcc-C-----CCCCcCCCCCChhhHHHHhhcCcc----ccccCCCCcEEEEeeCCCCccCcHHHHHHHHH
Q 004149 660 TDIPDWCYVESYG-S-----KGKDSFTESPSVEDLTRFHSKSPI----SHISKVKTPTIFLLGAQDLRVPVSNGLQYARA 729 (771)
Q Consensus 660 ~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~sp~----~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~ 729 (771)
.....+....... . .....+..... . ......+|. ..+.++. |+||++|++|.+++ +++.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~p~~~~~~~l~~l~-P~Lii~G~~D~~~~--~~~~~~~~ 311 (361)
T 1jkm_A 238 TELPSLVENDGYFIENGGMALLVRAYDPTGE-H--AEDPIAWPYFASEDELRGLP-PFVVAVNELDPLRD--EGIAFARR 311 (361)
T ss_dssp HHCTHHHHTTTSSSCHHHHHHHHHHHSSSST-T--TTCTTTCGGGCCHHHHTTCC-CEEEEEETTCTTHH--HHHHHHHH
T ss_pred ccCcchhhccCcccCHHHHHHHHHHhCCCCC-C--CCCcccCccccChhhHcCCC-ceEEEEcCcCcchh--hHHHHHHH
Confidence 0000000000000 0 00000000000 0 000112333 2345565 99999999999997 88899999
Q ss_pred HHhCCCCEEEEEeCCCCccCC-CC----CCh-HHHHHHHHHHHHHHh
Q 004149 730 LREKGVETKVIVFPNDVHGIE-RP----QSD-FESFLNIGLWFKKYC 770 (771)
Q Consensus 730 l~~~g~~~~~~~~~~~~H~~~-~~----~~~-~~~~~~i~~wl~~~l 770 (771)
+++.|++++++++++++|.+. .. ... .++++.+.+||+++.
T Consensus 312 l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 312 LARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp HHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999876 21 222 577889999998763
No 74
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=99.84 E-value=6.8e-20 Score=178.75 Aligned_cols=191 Identities=11% Similarity=0.098 Sum_probs=139.3
Q ss_pred EEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhh----------cCCCCccc
Q 004149 525 FVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ----------SLPGKVGS 594 (771)
Q Consensus 525 ~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~----------~~~~~~~~ 594 (771)
++.|. ..++.| ||++||.+.. ...|...+..|+ .||.|+++|.++....+..|.. ........
T Consensus 8 ~~~~~---~~~~~p-vv~lHG~g~~--~~~~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~ 80 (209)
T 3og9_A 8 VFKAG---RKDLAP-LLLLHSTGGD--EHQLVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLD 80 (209)
T ss_dssp EEECC---CTTSCC-EEEECCTTCC--TTTTHHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHH
T ss_pred EEeCC---CCCCCC-EEEEeCCCCC--HHHHHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHHHH
Confidence 44554 345678 9999997655 446777777776 7999999996532211222211 00000011
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCC
Q 004149 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSK 674 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (771)
...+++.+.++.+.++..+|+++++|+|||+||.+++.++.++|++++++|+.+|......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------- 141 (209)
T 3og9_A 81 EETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF------------------- 141 (209)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC-------------------
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc-------------------
Confidence 2245566666666666557889999999999999999999999999999999988642100
Q ss_pred CCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCC
Q 004149 675 GKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQS 754 (771)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 754 (771)
.......++|+|++||++|+++|+++++++++.|++.+.++++.+++ ++|.+.
T Consensus 142 ----------------------~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~---- 194 (209)
T 3og9_A 142 ----------------------EQTVQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYESS-LGHQLT---- 194 (209)
T ss_dssp ----------------------CCCCCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEECS-STTSCC----
T ss_pred ----------------------cccccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEcC-CCCcCC----
Confidence 00123457899999999999999999999999999999999999997 799885
Q ss_pred hHHHHHHHHHHHHHH
Q 004149 755 DFESFLNIGLWFKKY 769 (771)
Q Consensus 755 ~~~~~~~i~~wl~~~ 769 (771)
.+....+.+||+++
T Consensus 195 -~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 195 -QEEVLAAKKWLTET 208 (209)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhh
Confidence 46678999999874
No 75
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=99.84 E-value=6.6e-20 Score=211.27 Aligned_cols=246 Identities=13% Similarity=0.111 Sum_probs=169.2
Q ss_pred ccCCCce--EEEEEEecCCCCCCCCCcEEEEEcCCCCCCC----------------------------------------
Q 004149 514 TKGAQKP--FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS---------------------------------------- 551 (771)
Q Consensus 514 ~~~~g~~--l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~---------------------------------------- 551 (771)
...||.+ |.+.+|+|++ .++.|+||..||-+....
T Consensus 179 ~~~DG~~d~L~a~l~~P~~---~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~ 255 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKS---TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKEL 255 (763)
T ss_dssp TTCSSSCCEEEEEEEECCC---SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCCC
T ss_pred cCCCCCeeeEEEEEEecCC---CCcccEEEecCCcCCCCcccccccccccccccccccCccccccccccccccccccccc
Confidence 5678898 9999999984 468999998887322100
Q ss_pred ------CCcc-----hHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcC---------
Q 004149 552 ------LSSY-----SKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG--------- 611 (771)
Q Consensus 552 ------~~~~-----~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~--------- 611 (771)
...| ......|+++||+|+++|+||.++++.. ....+..+.+|+.++++||..+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~-----~~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~ 330 (763)
T 1lns_A 256 PIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGF-----QTSGDYQQIYSMTAVIDWLNGRARAYTSRKKT 330 (763)
T ss_dssp CEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSC-----CCTTSHHHHHHHHHHHHHHTTSSCEESSTTCC
T ss_pred cccccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCc-----CCCCCHHHHHHHHHHHHHHhhccccccccccc
Confidence 0111 1345789999999999999997665432 12233456899999999998431
Q ss_pred -----CCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCC-------CCCcchh----hhhccCCC
Q 004149 612 -----LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT-------DIPDWCY----VESYGSKG 675 (771)
Q Consensus 612 -----~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~-------~~~~~~~----~~~~~~~~ 675 (771)
..+.+||+|+|+||||++++.+|..+|+.++++|+.+|+.++....... ..+.+.. ...+....
T Consensus 331 ~~v~q~~~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~~ 410 (763)
T 1lns_A 331 HEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNL 410 (763)
T ss_dssp CEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGG
T ss_pred ccccccCCCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhhc
Confidence 1345799999999999999999999999999999999998765433211 0111100 00000000
Q ss_pred C---------------CcC-----CCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCC
Q 004149 676 K---------------DSF-----TESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGV 735 (771)
Q Consensus 676 ~---------------~~~-----~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~ 735 (771)
. ..+ ...+. ....+...++...+++|++|+|++||..|.++|+.++.++++++++ +.
T Consensus 411 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~-~~ 487 (763)
T 1lns_A 411 DGADFLKGNAEYEKRLAEMTAALDRKSGD--YNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPE-GH 487 (763)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHCTTTCC--CCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCT-TC
T ss_pred CcchhhhHHHHHHHHHHHHHhhhhhccCc--hhHHhhccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhcc-CC
Confidence 0 000 00000 0122345677788999999999999999999999999999999987 66
Q ss_pred CEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 736 ETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 736 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
+.++++ ++++|.........++.+.+.+||++|||
T Consensus 488 ~~~l~i-~~~gH~~~~~~~~~~~~~~i~~Ffd~~Lk 522 (763)
T 1lns_A 488 AKHAFL-HRGAHIYMNSWQSIDFSETINAYFVAKLL 522 (763)
T ss_dssp CEEEEE-ESCSSCCCTTBSSCCHHHHHHHHHHHHHT
T ss_pred CeEEEE-eCCcccCccccchHHHHHHHHHHHHHHhc
Confidence 676655 56789865332233568899999999986
No 76
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.84 E-value=6.7e-20 Score=214.37 Aligned_cols=312 Identities=12% Similarity=0.087 Sum_probs=188.9
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCC----
Q 004149 46 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN---- 121 (771)
Q Consensus 46 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~---- 121 (771)
.+.+++||+ +++.. ..+.++++++.+ ++.++++... ......+..++|||||++|||.+...+
T Consensus 20 ~~~~s~dg~-~~~~~---------~d~~i~~~~~~~--g~~~~~~~~~-~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~ 86 (719)
T 1z68_A 20 FPNWISGQE-YLHQS---------ADNNIVLYNIET--GQSYTILSNR-TMKSVNASNYGLSPDRQFVYLESDYSKLWRY 86 (719)
T ss_dssp CCEESSSSE-EEEEC---------TTSCEEEEESSS--CCEEEEECHH-HHHTTTCSEEEECTTSSEEEEEEEEEECSSS
T ss_pred ccEECCCCe-EEEEc---------CCCCEEEEEcCC--CcEEEEEccc-cccccceeeEEECCCCCeEEEEecCceeEEe
Confidence 445578994 44432 124788877643 3455554332 000012678999999999999876321
Q ss_pred -CCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCC
Q 004149 122 -ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWK 199 (771)
Q Consensus 122 -~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (771)
....+++.+ .+++......+.... ..++|||||++|||+.
T Consensus 87 s~~~~i~~~d~~~g~~~~~~~l~~~~----------~~~~~SPDG~~la~~~---------------------------- 128 (719)
T 1z68_A 87 SYTATYYIYDLSNGEFVRGNELPRPI----------QYLCWSPVGSKLAYVY---------------------------- 128 (719)
T ss_dssp CEEEEEEEEETTTTEECCSSCCCSSB----------CCEEECSSTTCEEEEE----------------------------
T ss_pred ecceEEEEEECCCCccccceecCccc----------ccceECCCCCEEEEEE----------------------------
Confidence 123455555 444430001112222 5899999999999973
Q ss_pred CcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCC-------------------ccceEEEecCCCCCccEEEE
Q 004149 200 GQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSL-------------------SVGQVVWAPLNEGLHQYLVF 260 (771)
Q Consensus 200 ~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~-------------------~~~~~~wspDg~~~~~~l~~ 260 (771)
...|++||+.+++.++++ .... ....++|||||+. |+|
T Consensus 129 -----------------~~~i~~~~~~~g~~~~l~--~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~----la~ 185 (719)
T 1z68_A 129 -----------------QNNIYLKQRPGDPPFQIT--FNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKF----LAY 185 (719)
T ss_dssp -----------------TTEEEEESSTTSCCEECC--CCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSE----EEE
T ss_pred -----------------CCeEEEEeCCCCCcEEEe--cCCCcCCeEcccccceeeeecccCcccEEECCCCCE----EEE
Confidence 258999999999888873 2211 1147999999999 999
Q ss_pred EeecCccee-e--------------eeeee----ccCCceeEEEecccccchhhhhhhhcCCCCCCcce---ec------
Q 004149 261 VGWSSETRK-L--------------GIKYC----YNRPCALYAVRVSLYKSEASELELKESSSEDLPVV---NL------ 312 (771)
Q Consensus 261 ~~~~~~~~~-~--------------g~~~~----~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~l------ 312 (771)
.+......+ . ...|. .+....|+++|+ ++++.. ++
T Consensus 186 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~-----------------~~~~~~~~~~~~~~~~~ 248 (719)
T 1z68_A 186 AEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDT-----------------TYPAYVGPQEVPVPAMI 248 (719)
T ss_dssp EEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEES-----------------SCHHHHCCEECCCCHHH
T ss_pred EEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEEC-----------------CCCCccceeEccCCccC
Confidence 885432100 0 00000 022347999998 555432 33
Q ss_pred CCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeee----cCCCCCCCCccceeeEEecccccCCCCCccccc
Q 004149 313 TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRID----WPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYS 388 (771)
Q Consensus 313 t~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d----~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~ 388 (771)
..+...+.+++|||||+ ++|..... + ....+|+++| +.+++.+.+...... ..+... ..
T Consensus 249 ~~~~~~~~~~~~SpD~~-~~~~~~~~----~--~~~~~l~~~d~~~~~~~g~~~~~~~~~~~-------~~~~~~---~~ 311 (719)
T 1z68_A 249 ASSDYYFSWLTWVTDER-VCLQWLKR----V--QNVSVLSICDFREDWQTWDCPKTQEHIEE-------SRTGWA---GG 311 (719)
T ss_dssp HTSCEEEEEEEESSSSE-EEEEEEES----S--TTEEEEEEEEECSSSSSEECCGGGEEEEE-------CSSSCS---SS
T ss_pred CCCcceEEEeEEeCCCe-EEEEEecc----c--cCeEEEEEEcccCCCCCCceEEEEecccc-------cCCceE---cc
Confidence 23455678999999976 55553322 1 2246799999 777666554320000 000000 00
Q ss_pred CCCCCCccccCCCEEEEE-eeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeC---CCCCCeEEEEE
Q 004149 389 SSILSNPWLSDGCTMLLS-SIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSS---PVDVPQVKYGY 464 (771)
Q Consensus 389 ~~~~~~~~s~dg~~l~~~-~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~---~~~p~~l~~~~ 464 (771)
.....+.|||||+.|++. +...+..+||.+++.+++.+.++.....+....++ +++.|+++... ......||..+
T Consensus 312 ~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 312 FFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp SSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred ccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 001267899999988875 44567788999999999988888765544455666 99999988864 12345677777
Q ss_pred ec
Q 004149 465 FV 466 (771)
Q Consensus 465 ~~ 466 (771)
+.
T Consensus 391 ~~ 392 (719)
T 1z68_A 391 IG 392 (719)
T ss_dssp CS
T ss_pred CC
Confidence 63
No 77
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=99.83 E-value=4.4e-20 Score=183.64 Aligned_cols=211 Identities=15% Similarity=0.068 Sum_probs=154.6
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCC---------
Q 004149 521 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK--------- 591 (771)
Q Consensus 521 l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~--------- 591 (771)
+..+++.|.+ +.|+||++||.+.. ...|...+..|+++||.|+++|+||.+...... ....
T Consensus 13 ~~~~~~~~~~-----~~~~vv~~hG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~---~~~~~~~~~~~~~ 82 (238)
T 1ufo_A 13 LSVLARIPEA-----PKALLLALHGLQGS--KEHILALLPGYAERGFLLLAFDAPRHGEREGPP---PSSKSPRYVEEVY 82 (238)
T ss_dssp EEEEEEEESS-----CCEEEEEECCTTCC--HHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCC---CCTTSTTHHHHHH
T ss_pred EEEEEEecCC-----CccEEEEECCCccc--chHHHHHHHHHHhCCCEEEEecCCCCccCCCCC---CcccccchhhhHH
Confidence 4455777762 67999999997654 335556667788899999999999954332111 0000
Q ss_pred -ccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhh
Q 004149 592 -VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 670 (771)
Q Consensus 592 -~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~ 670 (771)
......+|+.++++++.+.+. ++++++|||+||.+++.++.++|+.++++++.++...... ....
T Consensus 83 ~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~-------~~~~---- 148 (238)
T 1ufo_A 83 RVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKL-------PQGQ---- 148 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCC-------CTTC----
T ss_pred HHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchh-------hhhh----
Confidence 011236788888888877642 7899999999999999999999998999888776532110 0000
Q ss_pred ccCCCCCcCCCCCChhhHHHHhhcCccccccCC-CCcEEEEeeCCCCccCcHHHHHHHHHHH-hCCC-CEEEEEeCCCCc
Q 004149 671 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKV-KTPTIFLLGAQDLRVPVSNGLQYARALR-EKGV-ETKVIVFPNDVH 747 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i-~~P~Lii~G~~D~~vp~~~~~~~~~~l~-~~g~-~~~~~~~~~~~H 747 (771)
... ......+...++...+.++ ++|+|+++|++|..+|++.++++++.+. +.+. +++++++++++|
T Consensus 149 ---------~~~--~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 217 (238)
T 1ufo_A 149 ---------VVE--DPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGH 217 (238)
T ss_dssp ---------CCC--CHHHHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCS
T ss_pred ---------ccC--CcccchhhcCChhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCc
Confidence 001 1224455566677777888 8999999999999999999999999999 7777 899999999999
Q ss_pred cCCCCCChHHHHHHHHHHHHHHhC
Q 004149 748 GIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 748 ~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
.+. .+..+.+.+||.++|+
T Consensus 218 ~~~-----~~~~~~~~~~l~~~l~ 236 (238)
T 1ufo_A 218 TLT-----PLMARVGLAFLEHWLE 236 (238)
T ss_dssp SCC-----HHHHHHHHHHHHHHHH
T ss_pred ccH-----HHHHHHHHHHHHHHHh
Confidence 875 3567889999998863
No 78
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=99.83 E-value=4.8e-20 Score=182.87 Aligned_cols=198 Identities=12% Similarity=0.082 Sum_probs=143.1
Q ss_pred EEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCC----------------CChhhhhcC
Q 004149 525 FVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLG----------------FGEEALQSL 588 (771)
Q Consensus 525 ~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~----------------~g~~~~~~~ 588 (771)
++.|+ ..++.|+||++||.+.. ...|...+..|++.||.|+++|+++.+. +.... ..
T Consensus 14 ~~~p~---~~~~~~~vv~lHG~~~~--~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~~~~~--~~ 86 (232)
T 1fj2_A 14 AIVPA---ARKATAAVIFLHGLGDT--GHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDS--QE 86 (232)
T ss_dssp EEECC---SSCCSEEEEEECCSSSC--HHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTC--CB
T ss_pred cccCC---CCCCCceEEEEecCCCc--cchHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccCCccc--cc
Confidence 45565 34678999999997654 3356667777777899999995443100 10000 00
Q ss_pred CCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhh
Q 004149 589 PGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYV 668 (771)
Q Consensus 589 ~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~ 668 (771)
.........+++.++++++.+ ..++.++++|+|||+||.+++.++.++|++++++|+.+|........
T Consensus 87 ~~~~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~----------- 154 (232)
T 1fj2_A 87 DESGIKQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASF----------- 154 (232)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGS-----------
T ss_pred ccHHHHHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCccc-----------
Confidence 000011124566666666665 44777999999999999999999999999999999999975432110
Q ss_pred hhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCC--EEEEEeCCCC
Q 004149 669 ESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE--TKVIVFPNDV 746 (771)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~--~~~~~~~~~~ 746 (771)
. .....+.++++|+|+++|++|..+|++.++++++.+++.+.+ ++++++++++
T Consensus 155 ---~----------------------~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 209 (232)
T 1fj2_A 155 ---P----------------------QGPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMM 209 (232)
T ss_dssp ---C----------------------SSCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCC
T ss_pred ---c----------------------ccccccccCCCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEeCCCC
Confidence 0 001234567899999999999999999999999999988854 9999999999
Q ss_pred ccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 747 HGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 747 H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
|.+. .+.++.+.+||+++|+
T Consensus 210 H~~~-----~~~~~~i~~~l~~~l~ 229 (232)
T 1fj2_A 210 HSSC-----QQEMMDVKQFIDKLLP 229 (232)
T ss_dssp SSCC-----HHHHHHHHHHHHHHSC
T ss_pred cccC-----HHHHHHHHHHHHHhcC
Confidence 9883 3566899999999875
No 79
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=99.83 E-value=3.3e-20 Score=186.06 Aligned_cols=220 Identities=17% Similarity=0.128 Sum_probs=150.0
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCC
Q 004149 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 614 (771)
++.|+||++||.+.. ...|...+..|+++||.|+++|+||.+.+........ . ......+|+.++++++..+
T Consensus 20 ~~~~~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~-~-~~~~~~~d~~~~i~~l~~~---- 91 (251)
T 3dkr_A 20 GTDTGVVLLHAYTGS--PNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTK-G-NPDIWWAESSAAVAHMTAK---- 91 (251)
T ss_dssp CSSEEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHH-C-CHHHHHHHHHHHHHHHHTT----
T ss_pred CCCceEEEeCCCCCC--HHHHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCc-c-cHHHHHHHHHHHHHHHHHh----
Confidence 356889999997665 4477888999999999999999999554421110000 0 1112257888888888765
Q ss_pred CCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCCcCCCCCChhh-------
Q 004149 615 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVED------- 687 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 687 (771)
.++++|+|||+||.+++.++.++|++++++++.+|............ ..+...+. ......+....
T Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~ 164 (251)
T 3dkr_A 92 YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGF---LKYAEYMN----RLAGKSDESTQILAYLPG 164 (251)
T ss_dssp CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHH---HHHHHHHH----HHHTCCCCHHHHHHHHHH
T ss_pred cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHH---HHHHHHHH----hhcccCcchhhHHhhhHH
Confidence 57999999999999999999999999999999998765211000000 00000000 00000000000
Q ss_pred -HHHHh--hcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHH
Q 004149 688 -LTRFH--SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGL 764 (771)
Q Consensus 688 -~~~~~--~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~ 764 (771)
...+. .......+.++++|+|+++|++|..+|++.+..+++.+... .+++++++++++|.+.......++.+.+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~ 243 (251)
T 3dkr_A 165 QLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINA-ARVDFHWYDDAKHVITVNSAHHALEEDVIA 243 (251)
T ss_dssp HHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTC-SCEEEEEETTCCSCTTTSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCC-CCceEEEeCCCCcccccccchhHHHHHHHH
Confidence 00011 01123456788999999999999999999999998888764 568999999999998766667789999999
Q ss_pred HHHHHh
Q 004149 765 WFKKYC 770 (771)
Q Consensus 765 wl~~~l 770 (771)
||++..
T Consensus 244 fl~~~~ 249 (251)
T 3dkr_A 244 FMQQEN 249 (251)
T ss_dssp HHHTTC
T ss_pred HHHhhc
Confidence 998753
No 80
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=99.83 E-value=2e-20 Score=189.61 Aligned_cols=192 Identities=15% Similarity=0.157 Sum_probs=146.4
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCC-CCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004149 518 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHS-VSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 518 g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~-~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+..+...+|.|.+ ++.|+||++|||++. .....|...+..|+++||.|+++|+||++++ .....
T Consensus 48 ~~~~~~~~~~p~~----~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~~-----------~~~~~ 112 (262)
T 2pbl_A 48 GDRHKFDLFLPEG----TPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEV-----------RISEI 112 (262)
T ss_dssp STTCEEEEECCSS----SCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTS-----------CHHHH
T ss_pred CCCceEEEEccCC----CCCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCCC-----------ChHHH
Confidence 3445566888863 568999999997643 2344677778889999999999999986432 12234
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhC------CCceeEEEecCCccchhhhhcCCCCCcchhhhh
Q 004149 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA------PDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 670 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~------p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~ 670 (771)
.+|+.++++++..+.. ++++|+|||+||.+++.++.++ |++++++|+.+|+.++....... ....
T Consensus 113 ~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~~~------~~~~ 183 (262)
T 2pbl_A 113 TQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTS------MNEK 183 (262)
T ss_dssp HHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGST------THHH
T ss_pred HHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHhhh------hhhh
Confidence 7899999999988742 7899999999999999999887 88999999999987654321110 0000
Q ss_pred ccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCC
Q 004149 671 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE 750 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 750 (771)
+. .....+...+|...+.++++|+|+++|++|..+++++++.+++.+. ++++++++++|...
T Consensus 184 ~~-------------~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~H~~~ 245 (262)
T 2pbl_A 184 FK-------------MDADAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD-----ADHVIAFEKHHFNV 245 (262)
T ss_dssp HC-------------CCHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT-----CEEEEETTCCTTTT
T ss_pred hC-------------CCHHHHHhcCcccccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC-----CeEEEeCCCCcchH
Confidence 00 1123445667777788899999999999999999999999999886 78999999999876
Q ss_pred C
Q 004149 751 R 751 (771)
Q Consensus 751 ~ 751 (771)
.
T Consensus 246 ~ 246 (262)
T 2pbl_A 246 I 246 (262)
T ss_dssp T
T ss_pred H
Confidence 4
No 81
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.83 E-value=1.2e-18 Score=179.13 Aligned_cols=263 Identities=15% Similarity=0.142 Sum_probs=180.7
Q ss_pred cceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cC-CcceEEEecCCccc
Q 004149 69 KRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQ-SQLEKEFHVPQTVH 146 (771)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~ 146 (771)
...+.|+++++. .++..++.... ..+..++|||||++|++..+. .++.++ .+ ++..++......
T Consensus 19 ~~~~~i~~~d~~--~~~~~~~~~~~-----~~v~~~~~spdg~~l~~~~~~-----~i~~~d~~~~~~~~~~~~~~~~-- 84 (297)
T 2ojh_A 19 SMRSSIEIFNIR--TRKMRVVWQTP-----ELFEAPNWSPDGKYLLLNSEG-----LLYRLSLAGDPSPEKVDTGFAT-- 84 (297)
T ss_dssp CCCEEEEEEETT--TTEEEEEEEES-----SCCEEEEECTTSSEEEEEETT-----EEEEEESSSCCSCEECCCTTCC--
T ss_pred CcceeEEEEeCC--CCceeeeccCC-----cceEeeEECCCCCEEEEEcCC-----eEEEEeCCCCCCceEecccccc--
Confidence 345677777653 23444444332 568899999999999987532 466665 44 444444322210
Q ss_pred ccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEcc
Q 004149 147 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ 226 (771)
Q Consensus 147 g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~ 226 (771)
..+..+.|||||++|++...... ....||.+++.
T Consensus 85 ------~~~~~~~~spdg~~l~~~~~~~~----------------------------------------~~~~l~~~~~~ 118 (297)
T 2ojh_A 85 ------ICNNDHGISPDGALYAISDKVEF----------------------------------------GKSAIYLLPST 118 (297)
T ss_dssp ------CBCSCCEECTTSSEEEEEECTTT----------------------------------------SSCEEEEEETT
T ss_pred ------ccccceEECCCCCEEEEEEeCCC----------------------------------------CcceEEEEECC
Confidence 11258999999999999864321 24789999999
Q ss_pred CCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCC
Q 004149 227 SGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED 306 (771)
Q Consensus 227 ~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 306 (771)
+++.+.+ .... .+..+.|||||+. |+|++... ....||.+++ .+
T Consensus 119 ~~~~~~~--~~~~-~~~~~~~spdg~~----l~~~~~~~------------~~~~l~~~~~-----------------~~ 162 (297)
T 2ojh_A 119 GGTPRLM--TKNL-PSYWHGWSPDGKS----FTYCGIRD------------QVFDIYSMDI-----------------DS 162 (297)
T ss_dssp CCCCEEC--CSSS-SEEEEEECTTSSE----EEEEEEET------------TEEEEEEEET-----------------TT
T ss_pred CCceEEe--ecCC-CccceEECCCCCE----EEEEECCC------------CceEEEEEEC-----------------CC
Confidence 9888777 3333 3677899999998 99876322 2237888887 67
Q ss_pred CcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCccc
Q 004149 307 LPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGL 386 (771)
Q Consensus 307 ~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~ 386 (771)
+..+.+......+..+.|||||+.|++.+..+ ...+||.++..++....+.....
T Consensus 163 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--------~~~~i~~~~~~~~~~~~~~~~~~----------------- 217 (297)
T 2ojh_A 163 GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRT--------GQMQIWRVRVDGSSVERITDSAY----------------- 217 (297)
T ss_dssp CCEEECCCSSSCEEEEEECTTSSEEEEEECTT--------SSCEEEEEETTSSCEEECCCCSE-----------------
T ss_pred CcceEcccCCCccccceECCCCCEEEEEecCC--------CCccEEEECCCCCCcEEEecCCc-----------------
Confidence 77788887777788999999999999987643 14568888766554433322111
Q ss_pred ccCCCCCCccccCCCEEEEEeeeC--------CeeEEEEEECCCCcEEEecC---CCCCceeeEEeecCCEEEEEEeCCC
Q 004149 387 YSSSILSNPWLSDGCTMLLSSIWG--------SSQVIISVNVSSGELLRITP---AESNFSWSLLTLDGDNIIAVSSSPV 455 (771)
Q Consensus 387 ~~~~~~~~~~s~dg~~l~~~~~~~--------~~~~l~~~d~~tg~~~~l~~---~~~~~~~~~~s~d~~~l~~~~s~~~ 455 (771)
....+.|+|||+.|++.+... ....|+.+|+.+++.+.+.. ....+....|+++++.|++......
T Consensus 218 ---~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 294 (297)
T 2ojh_A 218 ---GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFPV 294 (297)
T ss_dssp ---EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECCC
T ss_pred ---ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEeccC
Confidence 123568999999998887654 33679999999988776653 2334555789999999998876553
No 82
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=99.83 E-value=1.4e-19 Score=177.51 Aligned_cols=197 Identities=15% Similarity=0.145 Sum_probs=142.0
Q ss_pred EEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHH--CCcEEEEECCCCC-----CCCC-hhhhhc-CC---CCc
Q 004149 525 FVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS--VGYSLLIVNYRGS-----LGFG-EEALQS-LP---GKV 592 (771)
Q Consensus 525 ~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~--~G~~V~~~d~rG~-----~~~g-~~~~~~-~~---~~~ 592 (771)
++.|+ ..++.|+||++||.+.. ...|...+..|++ +||.|+++|++|. .+++ ..|... .. ...
T Consensus 5 ~~~~~---~~~~~~~vv~~HG~~~~--~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~ 79 (218)
T 1auo_A 5 LILQP---AKPADACVIWLHGLGAD--RYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSI 79 (218)
T ss_dssp EEECC---SSCCSEEEEEECCTTCC--TTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEE
T ss_pred eecCC---CCCCCcEEEEEecCCCC--hhhHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCccccc
Confidence 34454 34678999999997755 4467788889988 9999999998741 0100 000000 00 001
Q ss_pred cccc----hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHH-hCCCceeEEEecCCccchhhhhcCCCCCcchh
Q 004149 593 GSQD----VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIG-QAPDKFVAAAARNPLCNLALMVGTTDIPDWCY 667 (771)
Q Consensus 593 ~~~~----~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~-~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~ 667 (771)
.... .+++...++++.+ ..++.++++++|||+||.+++.++. ++|++++++|+.+|.... ...+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~------~~~~---- 148 (218)
T 1auo_A 80 SLEELEVSAKMVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPT------FGDE---- 148 (218)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTT------CCTT----
T ss_pred chHHHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCC------chhh----
Confidence 1112 3445555555554 3467889999999999999999999 999999999999997643 0000
Q ss_pred hhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCc
Q 004149 668 VESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVH 747 (771)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H 747 (771)
. ......+++|+|+++|++|..+|++.++++++.+++.+.++++++++ ++|
T Consensus 149 -----~-----------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH 199 (218)
T 1auo_A 149 -----L-----------------------ELSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGH 199 (218)
T ss_dssp -----C-----------------------CCCHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSS
T ss_pred -----h-----------------------hhhhcccCCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEec-CCC
Confidence 0 00113457899999999999999999999999999988899999999 999
Q ss_pred cCCCCCChHHHHHHHHHHHHHHhC
Q 004149 748 GIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 748 ~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
.+. .+..+.+.+||.++|+
T Consensus 200 ~~~-----~~~~~~~~~~l~~~l~ 218 (218)
T 1auo_A 200 EVL-----PQEIHDIGAWLAARLG 218 (218)
T ss_dssp SCC-----HHHHHHHHHHHHHHHC
T ss_pred ccC-----HHHHHHHHHHHHHHhC
Confidence 875 3567899999999875
No 83
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=99.82 E-value=2.9e-19 Score=173.68 Aligned_cols=194 Identities=16% Similarity=0.181 Sum_probs=147.5
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchH--HHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCc
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK--SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 592 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~--~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~ 592 (771)
..+|.++++++|.|.+ +.|+||++||++.. ...|.. .+..|+++||.|+++|+||.+ .++..... .
T Consensus 10 ~~~g~~l~~~~~~~~~-----~~~~vv~~hG~~~~--~~~~~~~~~~~~l~~~G~~v~~~d~~g~g---~s~~~~~~--~ 77 (207)
T 3bdi_A 10 DVNGTRVFQRKMVTDS-----NRRSIALFHGYSFT--SMDWDKADLFNNYSKIGYNVYAPDYPGFG---RSASSEKY--G 77 (207)
T ss_dssp EETTEEEEEEEECCTT-----CCEEEEEECCTTCC--GGGGGGGTHHHHHHTTTEEEEEECCTTST---TSCCCTTT--C
T ss_pred eeCCcEEEEEEEeccC-----CCCeEEEECCCCCC--ccccchHHHHHHHHhCCCeEEEEcCCccc---ccCcccCC--C
Confidence 3468899999999863 56899999997765 346777 889999999999999999944 33110001 1
Q ss_pred ccc-chhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhc
Q 004149 593 GSQ-DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESY 671 (771)
Q Consensus 593 ~~~-~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 671 (771)
... ..+++.+.+..+.+. .+.++++++|||+||.+++.++.++|++++++++.+|..... +
T Consensus 78 ~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~----------~------ 139 (207)
T 3bdi_A 78 IDRGDLKHAAEFIRDYLKA--NGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVES----------L------ 139 (207)
T ss_dssp CTTCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGG----------G------
T ss_pred CCcchHHHHHHHHHHHHHH--cCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccc----------h------
Confidence 122 567777777777766 345799999999999999999999999999999998862100 0
Q ss_pred cCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCC
Q 004149 672 GSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER 751 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 751 (771)
...+.++++|+|+++|++|..++++.++.+.+.+. +++++++++++|.+..
T Consensus 140 -------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~~H~~~~ 190 (207)
T 3bdi_A 140 -------------------------KGDMKKIRQKTLLVWGSKDHVVPIALSKEYASIIS----GSRLEIVEGSGHPVYI 190 (207)
T ss_dssp -------------------------HHHHTTCCSCEEEEEETTCTTTTHHHHHHHHHHST----TCEEEEETTCCSCHHH
T ss_pred -------------------------hHHHhhccCCEEEEEECCCCccchHHHHHHHHhcC----CceEEEeCCCCCCccc
Confidence 12345678999999999999999998888887763 4789999999998653
Q ss_pred CCChHHHHHHHHHHHHH
Q 004149 752 PQSDFESFLNIGLWFKK 768 (771)
Q Consensus 752 ~~~~~~~~~~i~~wl~~ 768 (771)
. ...++.+.+.+||++
T Consensus 191 ~-~~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 191 E-KPEEFVRITVDFLRN 206 (207)
T ss_dssp H-SHHHHHHHHHHHHHT
T ss_pred c-CHHHHHHHHHHHHhh
Confidence 2 345677888888864
No 84
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=99.82 E-value=5.7e-19 Score=174.51 Aligned_cols=184 Identities=19% Similarity=0.245 Sum_probs=139.0
Q ss_pred CCCCCcEEEEEcCCCCCCCCCcchHHHHHHHH--CCcEEEEECCCCCC----------------CCChhhhhcCCCCccc
Q 004149 533 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS--VGYSLLIVNYRGSL----------------GFGEEALQSLPGKVGS 594 (771)
Q Consensus 533 ~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~--~G~~V~~~d~rG~~----------------~~g~~~~~~~~~~~~~ 594 (771)
+.++.|+||++||++.. ...|...+..|++ +||.|+++|++|.+ ++|.+ .....
T Consensus 20 ~~~~~~~vv~lHG~~~~--~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~------~~~~~ 91 (226)
T 3cn9_A 20 APNADACIIWLHGLGAD--RTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPA------RAIDE 91 (226)
T ss_dssp CTTCCEEEEEECCTTCC--GGGGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSST------TCBCH
T ss_pred CCCCCCEEEEEecCCCC--hHHHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCcccccccccccccc------ccccc
Confidence 55678999999997755 4467788888988 99999999988521 12211 01111
Q ss_pred cch----hhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHH-hCCCceeEEEecCCccchhhhhcCCCCCcchhhh
Q 004149 595 QDV----NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIG-QAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 669 (771)
Q Consensus 595 ~~~----~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~-~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~ 669 (771)
..+ +++...++.+.+ ..++.++++|+|||+||.+++.++. ++|++++++|+.+|........
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~------------ 158 (226)
T 3cn9_A 92 DQLNASADQVIALIDEQRA-KGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL------------ 158 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGGC------------
T ss_pred hhHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchhh------------
Confidence 223 344444444443 2467789999999999999999999 9999999999999976432110
Q ss_pred hccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccC
Q 004149 670 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 749 (771)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 749 (771)
.. ....+++|+|+++|++|..+|++.++++++.+.+.+.++++++++ ++|.+
T Consensus 159 -----------------------~~----~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~ 210 (226)
T 3cn9_A 159 -----------------------AL----DERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEV 210 (226)
T ss_dssp -----------------------CC----CTGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES-CCSSC
T ss_pred -----------------------hh----cccccCCCEEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEec-CCCCc
Confidence 00 013567899999999999999999999999999988899999999 99987
Q ss_pred CCCCChHHHHHHHHHHHHHHh
Q 004149 750 ERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 750 ~~~~~~~~~~~~i~~wl~~~l 770 (771)
. .+..+.+.+||+++|
T Consensus 211 ~-----~~~~~~i~~~l~~~l 226 (226)
T 3cn9_A 211 S-----LEEIHDIGAWLRKRL 226 (226)
T ss_dssp C-----HHHHHHHHHHHHHHC
T ss_pred c-----hhhHHHHHHHHHhhC
Confidence 4 456788999999875
No 85
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=99.82 E-value=3.8e-19 Score=180.91 Aligned_cols=219 Identities=17% Similarity=0.218 Sum_probs=149.8
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004149 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
+.|+||++||.+.. ...|...+..|+++||.|+++|+||.+...... .. ......++|+.++++++..+ .
T Consensus 39 ~~~~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~---~~-~~~~~~~~d~~~~i~~l~~~----~ 108 (270)
T 3rm3_A 39 GPVGVLLVHGFTGT--PHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDM---ER-TTFHDWVASVEEGYGWLKQR----C 108 (270)
T ss_dssp SSEEEEEECCTTCC--GGGTHHHHHHHHHTTCEEEECCCTTCSSCHHHH---HT-CCHHHHHHHHHHHHHHHHTT----C
T ss_pred CCeEEEEECCCCCC--hhHHHHHHHHHHHCCCEEEEeCCCCCCCCcccc---cc-CCHHHHHHHHHHHHHHHHhh----C
Confidence 45999999997655 346788899999999999999999955443221 11 11222367888888888765 5
Q ss_pred CeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCC----CCcchhhhhccCCCCC------cCCCCCCh
Q 004149 616 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD----IPDWCYVESYGSKGKD------SFTESPSV 685 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~------~~~~~~~~ 685 (771)
++++|+|||+||.+++.++.++|+ ++++|+.+|............ ...+. ..+...... .+...+ .
T Consensus 109 ~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~ 184 (270)
T 3rm3_A 109 QTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYL--DSIGSDLKNPDVKELAYEKTP-T 184 (270)
T ss_dssp SEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEE--ECCCCCCSCTTCCCCCCSEEE-H
T ss_pred CcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHH--HHhCccccccchHhhcccccC-h
Confidence 799999999999999999999999 999999999776543221110 01110 000000000 000000 0
Q ss_pred hhHHHHh--hcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHH
Q 004149 686 EDLTRFH--SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIG 763 (771)
Q Consensus 686 ~~~~~~~--~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~ 763 (771)
.....+. .......+.++++|+|+++|++|..+|++.+..+++.+.. .+++++++++++|.+.......++.+.+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~ 262 (270)
T 3rm3_A 185 ASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISS--TEKEIVRLRNSYHVATLDYDQPMIIERSL 262 (270)
T ss_dssp HHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSCC--SSEEEEEESSCCSCGGGSTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcCC--CcceEEEeCCCCcccccCccHHHHHHHHH
Confidence 1111110 0112245678899999999999999999999998888754 35799999999999876655578999999
Q ss_pred HHHHHHh
Q 004149 764 LWFKKYC 770 (771)
Q Consensus 764 ~wl~~~l 770 (771)
+||+++.
T Consensus 263 ~fl~~~~ 269 (270)
T 3rm3_A 263 EFFAKHA 269 (270)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9999875
No 86
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=99.82 E-value=1.3e-19 Score=183.85 Aligned_cols=198 Identities=19% Similarity=0.207 Sum_probs=141.7
Q ss_pred EEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHC--CcEEEEECCCC---CCCCChhhhhc--CCCCccc--
Q 004149 524 IFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV--GYSLLIVNYRG---SLGFGEEALQS--LPGKVGS-- 594 (771)
Q Consensus 524 ~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~--G~~V~~~d~rG---~~~~g~~~~~~--~~~~~~~-- 594 (771)
+..+|. .+.++.|+||++||.+.+ ...|...++.|+.+ ++.+++|+-+. ..+.|..|... .......
T Consensus 55 y~~~p~--~~~~~~plVI~LHG~G~~--~~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~ 130 (285)
T 4fhz_A 55 FGRRGA--APGEATSLVVFLHGYGAD--GADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAA 130 (285)
T ss_dssp EEEEES--CTTCCSEEEEEECCTTBC--HHHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHH
T ss_pred eecCCC--CCCCCCcEEEEEcCCCCC--HHHHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchh
Confidence 344554 367788999999995543 23454556666543 88999987431 12244444210 0000001
Q ss_pred -----cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhh
Q 004149 595 -----QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 669 (771)
Q Consensus 595 -----~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~ 669 (771)
...+++.+.++.+.++..+|++||+|+|+|+||.+++.++.++|+.++++|..++....
T Consensus 131 ~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~---------------- 194 (285)
T 4fhz_A 131 AEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLA---------------- 194 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSC----------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccC----------------
Confidence 11335556666666666699999999999999999999999999999999988774310
Q ss_pred hccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccC
Q 004149 670 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 749 (771)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 749 (771)
..... .....++|+|++||+.|++||++.++++++.|++.|.++++++|++.+|.+
T Consensus 195 ---------------~~~~~---------~~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i 250 (285)
T 4fhz_A 195 ---------------PERLA---------EEARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGI 250 (285)
T ss_dssp ---------------HHHHH---------HHCCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSC
T ss_pred ---------------chhhh---------hhhhhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
Confidence 01000 112346899999999999999999999999999999999999999999987
Q ss_pred CCCCChHHHHHHHHHHHHHHh
Q 004149 750 ERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 750 ~~~~~~~~~~~~i~~wl~~~l 770 (771)
. .+.+..+.+||+++|
T Consensus 251 ~-----~~~l~~~~~fL~~~L 266 (285)
T 4fhz_A 251 A-----PDGLSVALAFLKERL 266 (285)
T ss_dssp C-----HHHHHHHHHHHHHHC
T ss_pred C-----HHHHHHHHHHHHHHC
Confidence 5 456789999999987
No 87
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=99.81 E-value=2.4e-19 Score=176.80 Aligned_cols=198 Identities=16% Similarity=0.126 Sum_probs=142.8
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcC-CCC----c
Q 004149 518 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL-PGK----V 592 (771)
Q Consensus 518 g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~-~~~----~ 592 (771)
+.++...++.|. ....|+||++||++.. ...|......|++ ||.|+++|.++..+.|..+.... ... .
T Consensus 15 ~~~l~~~~~~~~----~~~~p~vv~lHG~g~~--~~~~~~~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~ 87 (223)
T 3b5e_A 15 DLAFPYRLLGAG----KESRECLFLLHGSGVD--ETTLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKS 87 (223)
T ss_dssp SSSSCEEEESTT----SSCCCEEEEECCTTBC--TTTTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHH
T ss_pred CCCceEEEeCCC----CCCCCEEEEEecCCCC--HHHHHHHHHhcCC-CceEEEeCCCCCcCCccccccccCCCcccHHH
Confidence 344555555553 2234999999997655 3467777777765 99999999876322122221110 000 0
Q ss_pred cccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhcc
Q 004149 593 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 672 (771)
Q Consensus 593 ~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~ 672 (771)
.....+++.+.++++.++..++.++++|+|||+||.+++.++.++|++++++|+.+|.....
T Consensus 88 ~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~------------------ 149 (223)
T 3b5e_A 88 ILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD------------------ 149 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS------------------
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcc------------------
Confidence 11234566777777776645788999999999999999999999999999999998864210
Q ss_pred CCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCC
Q 004149 673 SKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERP 752 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~ 752 (771)
. . .....+++|+|+++|++|..+|++.++ +++.+++.|.++++++++ ++|.+.
T Consensus 150 ~---------~--------------~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~-- 202 (223)
T 3b5e_A 150 H---------V--------------PATDLAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIG-- 202 (223)
T ss_dssp S---------C--------------CCCCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCC--
T ss_pred c---------c--------------ccccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcC--
Confidence 0 0 012345789999999999999999999 999999999999999999 999885
Q ss_pred CChHHHHHHHHHHHHHHh
Q 004149 753 QSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 753 ~~~~~~~~~i~~wl~~~l 770 (771)
.+..+.+.+||++.+
T Consensus 203 ---~~~~~~i~~~l~~~~ 217 (223)
T 3b5e_A 203 ---DPDAAIVRQWLAGPI 217 (223)
T ss_dssp ---HHHHHHHHHHHHCC-
T ss_pred ---HHHHHHHHHHHHhhh
Confidence 345678999997653
No 88
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=99.81 E-value=1.3e-18 Score=180.77 Aligned_cols=238 Identities=14% Similarity=0.246 Sum_probs=149.6
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|..+...++.+.. ..+..|+||++||.+.. ...|...+..|+++||.|+++|+||.+..... ......
T Consensus 28 ~~~~~~~~~~~~~~--~~~~~p~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~-------~~~~~~ 96 (315)
T 4f0j_A 28 QGQPLSMAYLDVAP--KKANGRTILLMHGKNFC--AGTWERTIDVLADAGYRVIAVDQVGFCKSSKP-------AHYQYS 96 (315)
T ss_dssp TTEEEEEEEEEECC--SSCCSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC-------SSCCCC
T ss_pred CCCCeeEEEeecCC--CCCCCCeEEEEcCCCCc--chHHHHHHHHHHHCCCeEEEeecCCCCCCCCC-------CccccC
Confidence 34445544444432 34567999999997765 44688889999999999999999995443211 112345
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCC---cch-------
Q 004149 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIP---DWC------- 666 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~---~~~------- 666 (771)
.+++.+.+..+++. ++.++++|+|||+||.+++.++.++|++++++|+.+|.............. .+.
T Consensus 97 ~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (315)
T 4f0j_A 97 FQQLAANTHALLER--LGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTS 174 (315)
T ss_dssp HHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHH--hCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHHHhhcccCC
Confidence 77777777777766 345789999999999999999999999999999999864211100000000 000
Q ss_pred ------hhh-hccCCC-CCc----------CCCCCChh--------hHHHHhhcCccccccCCCCcEEEEeeCCCCccCc
Q 004149 667 ------YVE-SYGSKG-KDS----------FTESPSVE--------DLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPV 720 (771)
Q Consensus 667 ------~~~-~~~~~~-~~~----------~~~~~~~~--------~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~ 720 (771)
+.. .+.... ... ........ ........+....+.++++|+|+++|++|..+|.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~lii~G~~D~~~p~ 254 (315)
T 4f0j_A 175 AEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIG 254 (315)
T ss_dssp HHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCCCCTT
T ss_pred hHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhhcccCCCCeEEEEecCCCcCcc
Confidence 000 000000 000 00000000 0111122334456788999999999999999994
Q ss_pred HHH------------HHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004149 721 SNG------------LQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 721 ~~~------------~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
++. .+..+.+.+...++++++++++||.+.. +...++.+.|.+||++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl~~ 313 (315)
T 4f0j_A 255 KDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQI-QAPERFHQALLEGLQT 313 (315)
T ss_dssp GGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCHHH-HSHHHHHHHHHHHHCC
T ss_pred ccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcchhh-hCHHHHHHHHHHHhcc
Confidence 433 3444445444456899999999998653 3456788888888864
No 89
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=99.81 E-value=6.8e-20 Score=188.03 Aligned_cols=232 Identities=12% Similarity=0.059 Sum_probs=152.9
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcch---HHHHHHHHCCcEEEEECCC--CCC---------CCC
Q 004149 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS---KSLAFLSSVGYSLLIVNYR--GSL---------GFG 581 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~---~~~~~la~~G~~V~~~d~r--G~~---------~~g 581 (771)
..|.++.+.+|.|++.. .+++|+||++||++... ..|. .....+++.||.|+++|.+ |.+ ++|
T Consensus 31 ~~~~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g 107 (283)
T 4b6g_A 31 TLQCEMKFAVYLPNNPE-NRPLGVIYWLSGLTCTE--QNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQS 107 (283)
T ss_dssp TTTEEEEEEEEECCCTT-CCCEEEEEEECCTTCCS--HHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTT
T ss_pred hhCCceEEEEEeCCCCC-CCCCCEEEEEcCCCCCc--cchhhcccHHHHHhhCCeEEEEeccccccccccccccccccCC
Confidence 35778999999998654 67899999999987653 2332 2346677889999999964 432 122
Q ss_pred hhhhhcCCC-Ccc-ccchhh-HH-HHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhh
Q 004149 582 EEALQSLPG-KVG-SQDVND-VL-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV 657 (771)
Q Consensus 582 ~~~~~~~~~-~~~-~~~~~D-~~-~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~ 657 (771)
.++...... .+. .....+ +. +.+.++.+... +.+|++|+||||||++|+.++.++|++|+++++.+|+++.....
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~~ 186 (283)
T 4b6g_A 108 AGFYLNATEQPWAANYQMYDYILNELPRLIEKHFP-TNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILSPSLVP 186 (283)
T ss_dssp BCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSC-EEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCCGGGSH
T ss_pred CcccccCccCcccchhhHHHHHHHHHHHHHHHhCC-CCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccccccCc
Confidence 222111111 110 011122 12 33444444432 46899999999999999999999999999999999987643210
Q ss_pred cCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCC--CCcEEEEeeCCCCccCc-HHHHHHHHHHHhCC
Q 004149 658 GTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV--KTPTIFLLGAQDLRVPV-SNGLQYARALREKG 734 (771)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i--~~P~Lii~G~~D~~vp~-~~~~~~~~~l~~~g 734 (771)
.. ...+...++. ....+...+|...+.++ .+|+|++||+.|.+++. .++++++++|++.|
T Consensus 187 ~~----~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~~~~~~~~~~~l~~~g 249 (283)
T 4b6g_A 187 WG----EKAFTAYLGK-------------DREKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAAN 249 (283)
T ss_dssp HH----HHHHHHHHCS-------------CGGGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHHHHTCHHHHHHHHHHHT
T ss_pred ch----hhhHHhhcCC-------------chHHHHhcCHHHHHHhcccCCCEEEEecCCCccCcchhhHHHHHHHHHHcC
Confidence 00 0000011111 11223344555544444 35999999999999976 23889999999999
Q ss_pred CCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 735 VETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 735 ~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
+++++.++|+++|.+. .....+..+++|+.++|+
T Consensus 250 ~~~~~~~~~g~~H~~~---~~~~~l~~~l~~~~~~l~ 283 (283)
T 4b6g_A 250 QPVDVRFHKGYDHSYY---FIASFIGEHIAYHAAFLK 283 (283)
T ss_dssp CCCEEEEETTCCSSHH---HHHHHHHHHHHHHHTTCC
T ss_pred CCceEEEeCCCCcCHh---HHHHHHHHHHHHHHHhcC
Confidence 9999999999999863 234567889999999885
No 90
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=99.81 E-value=2.8e-19 Score=192.96 Aligned_cols=229 Identities=14% Similarity=0.098 Sum_probs=151.6
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|.++.++++.|. ..++.|+||++||.+... ...+......|+++||.|+++|+|| +|.+.... ...+
T Consensus 176 ~g~~l~~~~~~P~---~~~~~P~vv~~hG~~~~~-~~~~~~~~~~l~~~G~~V~~~D~~G---~G~s~~~~-----~~~~ 243 (415)
T 3mve_A 176 EKGKITAHLHLTN---TDKPHPVVIVSAGLDSLQ-TDMWRLFRDHLAKHDIAMLTVDMPS---VGYSSKYP-----LTED 243 (415)
T ss_dssp SSSEEEEEEEESC---SSSCEEEEEEECCTTSCG-GGGHHHHHHTTGGGTCEEEEECCTT---SGGGTTSC-----CCSC
T ss_pred CCEEEEEEEEecC---CCCCCCEEEEECCCCccH-HHHHHHHHHHHHhCCCEEEEECCCC---CCCCCCCC-----CCCC
Confidence 5788999999997 356789999999966442 2234445677889999999999999 44442111 1112
Q ss_pred h-hhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhh-h-cCCCCCcchhhhhccC
Q 004149 597 V-NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM-V-GTTDIPDWCYVESYGS 673 (771)
Q Consensus 597 ~-~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~-~-~~~~~~~~~~~~~~~~ 673 (771)
. .....+++++.....+|.++|+|+|||+||++++.++..+|++++++|+.+|+++.... . .....+. .+...+..
T Consensus 244 ~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 322 (415)
T 3mve_A 244 YSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKLQQMPK-MYLDVLAS 322 (415)
T ss_dssp TTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHHHHTTSCH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHHHHHHhHH-HHHHHHHH
Confidence 2 33356777877776678899999999999999999999999999999999998643211 0 0000110 00000000
Q ss_pred CCCCcCCCC-CCh-hhHHHHhhcCcccc----ccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCC-CC
Q 004149 674 KGKDSFTES-PSV-EDLTRFHSKSPISH----ISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN-DV 746 (771)
Q Consensus 674 ~~~~~~~~~-~~~-~~~~~~~~~sp~~~----~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~-~~ 746 (771)
.+... ... .....+...++... +.++++|+|+++|++|.++|++.+..+.+ .+.+++++++++ ..
T Consensus 323 ----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~----~~~~~~l~~i~g~~~ 394 (415)
T 3mve_A 323 ----RLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAF----FSTYGKAKKISSKTI 394 (415)
T ss_dssp ----HTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSCHHHHHHHHH----TBTTCEEEEECCCSH
T ss_pred ----HhCCCccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHH----hCCCceEEEecCCCc
Confidence 00000 011 11112222333221 46788999999999999999988877665 456689999998 33
Q ss_pred ccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 747 HGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 747 H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
|. ...+.+..+.+||+++|+
T Consensus 395 h~-----~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 395 TQ-----GYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp HH-----HHHHHHHHHHHHHHHHHT
T ss_pred cc-----chHHHHHHHHHHHHHHhc
Confidence 32 345788999999999874
No 91
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=99.81 E-value=4.2e-19 Score=185.96 Aligned_cols=219 Identities=16% Similarity=0.221 Sum_probs=150.6
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCCcchHHHHHHH-HCCcEEEEECCCCCCCCChhhhhcCCCCccccchh
Q 004149 521 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 598 (771)
Q Consensus 521 l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~-~~~~~~~~~~~la-~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~ 598 (771)
+.++++.|.+ ++.|+||++|||++.. ....|...+..|+ +.||.|+++||||+++.. ....++
T Consensus 84 ~~~~~~~p~~----~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~-----------~~~~~~ 148 (326)
T 3d7r_A 84 MQVFRFNFRH----QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFH-----------IDDTFQ 148 (326)
T ss_dssp EEEEEEESTT----CCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSC-----------HHHHHH
T ss_pred EEEEEEeeCC----CCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCC-----------chHHHH
Confidence 5667788863 4569999999987543 2335556677776 569999999999965421 123478
Q ss_pred hHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCc----eeEEEecCCccchhhhhcCCCCCcchhhhhccCC
Q 004149 599 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGTTDIPDWCYVESYGSK 674 (771)
Q Consensus 599 D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (771)
|+.++++++.++ ++.++++|+|||+||.+|+.++.++|+. ++++|+.+|+.+....... ... ..... ..
T Consensus 149 d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~--~~~-~~~~~-~~- 221 (326)
T 3d7r_A 149 AIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKD--ISD-ALIEQ-DA- 221 (326)
T ss_dssp HHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTT--CCH-HHHHH-CS-
T ss_pred HHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChh--HHh-hhccc-Cc-
Confidence 999999999887 6788999999999999999999887665 9999999998764321100 000 00000 00
Q ss_pred CCCcCCCCCChhhH----HHH--------hhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEe
Q 004149 675 GKDSFTESPSVEDL----TRF--------HSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF 742 (771)
Q Consensus 675 ~~~~~~~~~~~~~~----~~~--------~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~ 742 (771)
....... ..+ ...+|+...-...+|+||++|++|..+ .++..+.+.+++.+.+++++++
T Consensus 222 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~--~~~~~~~~~l~~~~~~~~~~~~ 292 (326)
T 3d7r_A 222 -------VLSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREMTH--PDMKLFEQMMLQHHQYIEFYDY 292 (326)
T ss_dssp -------SCCHHHHHHHHHHHHTTSCTTSTTTSGGGSCCTTCCCEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEE
T ss_pred -------ccCHHHHHHHHHHhcCCCCCCCCeECcccCCcccCCCEEEEEeCcccch--HHHHHHHHHHHHCCCcEEEEEe
Confidence 0000000 000 112232211112269999999999744 6778899999999999999999
Q ss_pred CCCCccCCC--CCChHHHHHHHHHHHHHHh
Q 004149 743 PNDVHGIER--PQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 743 ~~~~H~~~~--~~~~~~~~~~i~~wl~~~l 770 (771)
++++|.+.. .+...++++.+.+||++++
T Consensus 293 ~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l 322 (326)
T 3d7r_A 293 PKMVHDFPIYPIRQSHKAIKQIAKSIDEDV 322 (326)
T ss_dssp TTCCTTGGGSSSHHHHHHHHHHHHHHTSCC
T ss_pred CCCcccccccCCHHHHHHHHHHHHHHHHHh
Confidence 999998765 2445578899999998765
No 92
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=99.81 E-value=1.1e-19 Score=184.09 Aligned_cols=230 Identities=13% Similarity=0.066 Sum_probs=149.4
Q ss_pred CCceEEEEEEecCCCC----CCCCCcEEEEEcCCCCCCCCCcchH--HHHHH-HHCCcEEEEECCCCCCCCChhhhhcCC
Q 004149 517 AQKPFEAIFVSSSHKK----DCSCDPLIVVLHGGPHSVSLSSYSK--SLAFL-SSVGYSLLIVNYRGSLGFGEEALQSLP 589 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~----~~~~~p~vv~~HGg~~~~~~~~~~~--~~~~l-a~~G~~V~~~d~rG~~~~g~~~~~~~~ 589 (771)
.|.++.+++|.|++.. +.++.|+||++||++.. ...|.. .+..+ ++.||.|+++|+++++..... ..
T Consensus 17 ~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----~~ 90 (263)
T 2uz0_A 17 LDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGN--HNSWLKRTNVERLLRGTNLIVVMPNTSNGWYTDTQ----YG 90 (263)
T ss_dssp TTEEEEEEEEECC---------CCBCEEEEECCTTCC--TTHHHHHSCHHHHTTTCCCEEEECCCTTSTTSBCT----TS
T ss_pred hCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCC--HHHHHhccCHHHHHhcCCeEEEEECCCCCccccCC----Cc
Confidence 5678999999998652 35678999999998765 334544 24444 558999999999875332110 00
Q ss_pred CCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCC-Ccchhh
Q 004149 590 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDI-PDWCYV 668 (771)
Q Consensus 590 ~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~-~~~~~~ 668 (771)
........+|+...++.+..+..+|.++++|+|||+||++++.++. +|++++++++.+|..+...+...... ....+.
T Consensus 91 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 169 (263)
T 2uz0_A 91 FDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNFSPESQNLGSPAYW 169 (263)
T ss_dssp CBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSCCGGGTTCSCHHHH
T ss_pred ccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhccccccccccchhH
Confidence 0111112345555555443323457899999999999999999999 89999999999998765431100000 000000
Q ss_pred -hhccCCCCCcCCCCCChhhHHHHhhcCccccccCCC--CcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCC
Q 004149 669 -ESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK--TPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPND 745 (771)
Q Consensus 669 -~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~--~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~ 745 (771)
..++. .. ...+...+|...+.+++ +|+|++||++|.++ ..++.+++.+++.|.+++++++++
T Consensus 170 ~~~~~~---------~~---~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v--~~~~~~~~~l~~~g~~~~~~~~~g- 234 (263)
T 2uz0_A 170 RGVFGE---------IR---DWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLY--EANNLAVKNLKKLGFDVTYSHSAG- 234 (263)
T ss_dssp HHHHCC---------CS---CTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTH--HHHHHHHHHHHHTTCEEEEEEESC-
T ss_pred HHHcCC---------hh---hhccccCCHHHHHHhccCCCeEEEEeCCCchhh--HHHHHHHHHHHHCCCCeEEEECCC-
Confidence 00110 00 01223445555556654 79999999999998 457899999999999999999999
Q ss_pred CccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 746 VHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 746 ~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
+|.+. ...+.+..+++||.++|+
T Consensus 235 ~H~~~---~~~~~~~~~~~~l~~~l~ 257 (263)
T 2uz0_A 235 THEWY---YWEKQLEVFLTTLPIDFK 257 (263)
T ss_dssp CSSHH---HHHHHHHHHHHHSSSCCC
T ss_pred CcCHH---HHHHHHHHHHHHHHhhcc
Confidence 99763 124667889999987764
No 93
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=99.81 E-value=5.4e-19 Score=179.68 Aligned_cols=206 Identities=11% Similarity=-0.036 Sum_probs=144.9
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCC-----cchHHHHHHHHC----CcEEEEECCCCCCCCChhhhhc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-----SYSKSLAFLSSV----GYSLLIVNYRGSLGFGEEALQS 587 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~-----~~~~~~~~la~~----G~~V~~~d~rG~~~~g~~~~~~ 587 (771)
.|.++.+.+|.|+++...++.|+||++||++...... .+...++.|+++ ||.|+++|+++.+.. .
T Consensus 42 ~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~---~--- 115 (268)
T 1jjf_A 42 TNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPG---I--- 115 (268)
T ss_dssp TTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTT---C---
T ss_pred cCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCcc---c---
Confidence 4678999999999766677899999999977543211 123346777776 599999999984321 0
Q ss_pred CCCCccccchhh-HHHHHHHHHHcCCC--CCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCc
Q 004149 588 LPGKVGSQDVND-VLTAIDHVIDMGLA--NPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPD 664 (771)
Q Consensus 588 ~~~~~~~~~~~D-~~~~i~~l~~~~~~--d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~ 664 (771)
...+ ....++ +.++++++.++..+ |++|++|+|+|+||++++.++.++|++++++++.+|..+....
T Consensus 116 -~~~~-~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~-------- 185 (268)
T 1jjf_A 116 -ADGY-ENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPN-------- 185 (268)
T ss_dssp -SCHH-HHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCCH--------
T ss_pred -cccH-HHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCCCCCch--------
Confidence 0001 111233 44556677665444 7899999999999999999999999999999999997542110
Q ss_pred chhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCC-cEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeC
Q 004149 665 WCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKT-PTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFP 743 (771)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~-P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~ 743 (771)
...+.. .. . ....+. |+|++||+.|.++| .++.+++.|++.|+++++++++
T Consensus 186 ---~~~~~~---------~~-~-------------~~~~~~pp~li~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~ 237 (268)
T 1jjf_A 186 ---ERLFPD---------GG-K-------------AAREKLKLLFIACGTNDSLIG--FGQRVHEYCVANNINHVYWLIQ 237 (268)
T ss_dssp ---HHHCTT---------TT-H-------------HHHHHCSEEEEEEETTCTTHH--HHHHHHHHHHHTTCCCEEEEET
T ss_pred ---hhhcCc---------ch-h-------------hhhhcCceEEEEecCCCCCcc--HHHHHHHHHHHCCCceEEEEcC
Confidence 000000 00 0 001123 59999999999997 4778999999999999999999
Q ss_pred CCCccCCCCCChHHHHHHHHHHHHHH
Q 004149 744 NDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 744 ~~~H~~~~~~~~~~~~~~i~~wl~~~ 769 (771)
+++|.+. ...+.+..+++||.++
T Consensus 238 g~~H~~~---~~~~~~~~~~~~l~~~ 260 (268)
T 1jjf_A 238 GGGHDFN---VWKPGLWNFLQMADEA 260 (268)
T ss_dssp TCCSSHH---HHHHHHHHHHHHHHHH
T ss_pred CCCcCHh---HHHHHHHHHHHHHHhc
Confidence 9999864 2335567888998775
No 94
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=99.81 E-value=6.4e-19 Score=174.08 Aligned_cols=183 Identities=14% Similarity=0.187 Sum_probs=139.7
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEE--CCCCCCCCChhhh-hc-CCCCcc----ccchhhHHHHHHH
Q 004149 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIV--NYRGSLGFGEEAL-QS-LPGKVG----SQDVNDVLTAIDH 606 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~--d~rG~~~~g~~~~-~~-~~~~~~----~~~~~D~~~~i~~ 606 (771)
++.|+||++||++.. ...|...+..|++ ||.|+++ |++|. |.+.. .. ...... ..+++++.+.+++
T Consensus 36 ~~~~~vv~~HG~~~~--~~~~~~~~~~l~~-g~~v~~~~~d~~g~---g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 109 (226)
T 2h1i_A 36 TSKPVLLLLHGTGGN--ELDLLPLAEIVDS-EASVLSVRGNVLEN---GMPRFFRRLAEGIFDEEDLIFRTKELNEFLDE 109 (226)
T ss_dssp TTSCEEEEECCTTCC--TTTTHHHHHHHHT-TSCEEEECCSEEET---TEEESSCEEETTEECHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEecCCCC--hhHHHHHHHHhcc-CceEEEecCcccCC---cchhhccccCccCcChhhHHHHHHHHHHHHHH
Confidence 568999999997765 4467778888877 9999999 77774 32210 00 001111 1124456666766
Q ss_pred HHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCCcCCCCCChh
Q 004149 607 VIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVE 686 (771)
Q Consensus 607 l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (771)
+.++..++.++++++|||+||.+++.++.++|++++++|+.+|......
T Consensus 110 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------------------- 158 (226)
T 2h1i_A 110 AAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG------------------------------- 158 (226)
T ss_dssp HHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS-------------------------------
T ss_pred HHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc-------------------------------
Confidence 6777667889999999999999999999999999999999998743110
Q ss_pred hHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHH
Q 004149 687 DLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWF 766 (771)
Q Consensus 687 ~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl 766 (771)
......+++|+|+++|+.|..+|++.++.+++.+.+.+.++++ ++++++|.+. .+..+.+.+||
T Consensus 159 ----------~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l 222 (226)
T 2h1i_A 159 ----------MQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTM-HWENRGHQLT-----MGEVEKAKEWY 222 (226)
T ss_dssp ----------CCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTTSCC-----HHHHHHHHHHH
T ss_pred ----------cccccccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCCC-----HHHHHHHHHHH
Confidence 0112234789999999999999999999999999988888888 9999999884 46788999999
Q ss_pred HHHh
Q 004149 767 KKYC 770 (771)
Q Consensus 767 ~~~l 770 (771)
.++|
T Consensus 223 ~~~l 226 (226)
T 2h1i_A 223 DKAF 226 (226)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 9875
No 95
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=99.81 E-value=8.2e-20 Score=190.04 Aligned_cols=226 Identities=18% Similarity=0.194 Sum_probs=151.9
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CCcchHHHHHHH-HCCcEEEEECCCCCCCCChhhhhcCCCCcc
Q 004149 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~-~~~~~~~~~~la-~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~ 593 (771)
.+| .+.+++| +. .++.|+||++|||++... ...+...+..|+ +.||.|+++||||.+++. .
T Consensus 64 ~~g-~i~~~~y-~~----~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~-----------~ 126 (311)
T 1jji_A 64 RNG-DIRVRVY-QQ----KPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHK-----------F 126 (311)
T ss_dssp TTE-EEEEEEE-ES----SSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSC-----------T
T ss_pred CCC-cEEEEEE-cC----CCCceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCCCC-----------C
Confidence 344 7888888 42 356799999999885332 346677788887 689999999999965531 1
Q ss_pred ccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHHhCCCc----eeEEEecCCccchhhhh----cCCCC
Q 004149 594 SQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMV----GTTDI 662 (771)
Q Consensus 594 ~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~p~~~~~~~~----~~~~~ 662 (771)
....+|+.++++|+.+.. .+++++|+|+|+|+||.+++.++.++++. ++++|+.+|+.+..... .....
T Consensus 127 p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~ 206 (311)
T 1jji_A 127 PAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLLEFGEG 206 (311)
T ss_dssp THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHHHTSSS
T ss_pred CCcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCCccHHHhcCC
Confidence 234788999999988752 36778999999999999999999887665 99999999987642110 00000
Q ss_pred Cc-c--hhhhhccCCCCCcCCCCCChhhHHHHhhcCccc-cccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEE
Q 004149 663 PD-W--CYVESYGSKGKDSFTESPSVEDLTRFHSKSPIS-HISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 738 (771)
Q Consensus 663 ~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~-~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~ 738 (771)
.. + .....+. ..+.... . .......+|+. .+..+ +|+||++|+.|.++ .++..+++.|++.+++++
T Consensus 207 ~~~~~~~~~~~~~----~~~~~~~--~-~~~~~~~~p~~~~l~~~-~P~li~~G~~D~l~--~~~~~~~~~l~~~g~~~~ 276 (311)
T 1jji_A 207 LWILDQKIMSWFS----EQYFSRE--E-DKFNPLASVIFADLENL-PPALIITAEYDPLR--DEGEVFGQMLRRAGVEAS 276 (311)
T ss_dssp CSSCCHHHHHHHH----HHHCSSG--G-GGGCTTTSGGGSCCTTC-CCEEEEEEEECTTH--HHHHHHHHHHHHTTCCEE
T ss_pred CccCCHHHHHHHH----HHhCCCC--c-cCCCcccCcccccccCC-ChheEEEcCcCcch--HHHHHHHHHHHHcCCCEE
Confidence 00 0 0000000 0000000 0 00011223432 22232 69999999999998 577889999999999999
Q ss_pred EEEeCCCCccCCCC----CChHHHHHHHHHHHHH
Q 004149 739 VIVFPNDVHGIERP----QSDFESFLNIGLWFKK 768 (771)
Q Consensus 739 ~~~~~~~~H~~~~~----~~~~~~~~~i~~wl~~ 768 (771)
++++++++|.+... +...++++.+.+||++
T Consensus 277 ~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 277 IVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp EEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred EEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 99999999987532 3345678888999874
No 96
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.80 E-value=3e-19 Score=192.58 Aligned_cols=261 Identities=16% Similarity=0.118 Sum_probs=170.8
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCC
Q 004149 101 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 179 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 179 (771)
...++|||||++|||+...+ +..+++.++ .+++.++++...... ...+.|||||++|+|++..
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~-g~~~l~~~d~~~~~~~~l~~~~~~~---------~~~~~~spdg~~l~~~~~~------ 101 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFD-GNRNYYLLNLETQQAVQLTEGKGDN---------TFGGFISTDERAFFYVKNE------ 101 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTT-SSCEEEEEETTTTEEEECCCSSCBC---------TTTCEECTTSSEEEEEETT------
T ss_pred eecCcCCCCCCEEEEEEecC-CCceEEEEECCCCcEEEeecCCCCc---------cccceECCCCCEEEEEEcC------
Confidence 56789999999999998764 556788887 555555544322211 1248899999999998532
Q ss_pred CccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEE
Q 004149 180 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 259 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~ 259 (771)
.+|+++|+.+++.+.+. .... .|+|||+. |+
T Consensus 102 --------------------------------------~~l~~~d~~~~~~~~~~--~~~~-----~~~~~g~~----l~ 132 (396)
T 3c5m_A 102 --------------------------------------LNLMKVDLETLEEQVIY--TVDE-----EWKGYGTW----VA 132 (396)
T ss_dssp --------------------------------------TEEEEEETTTCCEEEEE--ECCT-----TEEEEEEE----EE
T ss_pred --------------------------------------CcEEEEECCCCCcEEEE--eccc-----ccCCCCCE----EE
Confidence 36999999999888773 2111 16677666 66
Q ss_pred EEeecC-------------cceeeeeee--eccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceee
Q 004149 260 FVGWSS-------------ETRKLGIKY--CYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRF 324 (771)
Q Consensus 260 ~~~~~~-------------~~~~~g~~~--~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~ 324 (771)
|.+... +...+.... .......||++|+ .+++.+.++.....+..+.|
T Consensus 133 ~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~-----------------~~g~~~~~~~~~~~~~~~~~ 195 (396)
T 3c5m_A 133 NSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDI-----------------ETGELEVIHQDTAWLGHPIY 195 (396)
T ss_dssp CTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEET-----------------TTCCEEEEEEESSCEEEEEE
T ss_pred eccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEEC-----------------CCCcEEeeccCCcccccceE
Confidence 642110 000000000 0024458999998 77888777766666788999
Q ss_pred cC-CCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEE
Q 004149 325 SP-DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTM 403 (771)
Q Consensus 325 Sp-DG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l 403 (771)
|| ||++|+|.+... ......+|+++|+.++..+.++..... ..+..+.|||||+.|
T Consensus 196 sp~dg~~l~~~~~~~-----~~~~~~~l~~~d~~~~~~~~l~~~~~~------------------~~~~~~~~spdg~~l 252 (396)
T 3c5m_A 196 RPFDDSTVGFCHEGP-----HDLVDARMWLVNEDGSNVRKIKEHAEG------------------ESCTHEFWIPDGSAM 252 (396)
T ss_dssp ETTEEEEEEEEECSC-----SSSCSCCCEEEETTSCCCEESSCCCTT------------------EEEEEEEECTTSSCE
T ss_pred CCCCCCEEEEEecCC-----CCCCCceEEEEECCCCceeEeeccCCC------------------ccccceEECCCCCEE
Confidence 99 899999998532 111125799999887665444321000 012356899999999
Q ss_pred EEEeeeCCee--EEEEEECCCCcEEEecCCCCCceeeEEee-cCCEEEEEEeC------------CCCCCeEEEEEeccc
Q 004149 404 LLSSIWGSSQ--VIISVNVSSGELLRITPAESNFSWSLLTL-DGDNIIAVSSS------------PVDVPQVKYGYFVDK 468 (771)
Q Consensus 404 ~~~~~~~~~~--~l~~~d~~tg~~~~l~~~~~~~~~~~~s~-d~~~l~~~~s~------------~~~p~~l~~~~~~~~ 468 (771)
++.+...+.. .|+.+|+.+++.+.+..... .. ..|++ ||+.+++..+. ......||+.++.++
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 253 AYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp EEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTT
T ss_pred EEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccC
Confidence 8887765554 49999999999888764433 23 78999 99976664432 112367888886544
No 97
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.80 E-value=6.1e-18 Score=205.71 Aligned_cols=328 Identities=11% Similarity=0.008 Sum_probs=210.1
Q ss_pred ceEEEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccc-------eEEEeCCCCCeEE
Q 004149 42 KAWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGA-------SAVVPSPSGSKLL 114 (771)
Q Consensus 42 ~~~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~-------~~~~~SPdG~~la 114 (771)
.....+..||||++|+|...... ......||++++. ++..++|+..+ ..+ ..++|||||+ ++
T Consensus 53 ~~v~~~~~SPDG~~la~~s~~~~---~~~~~~i~~~d~~--~g~~~~lt~~~-----~~~~~~~~~~~~~~~SpDg~-ll 121 (1045)
T 1k32_A 53 GVINNARFFPDGRKIAIRVMRGS---SLNTADLYFYNGE--NGEIKRITYFS-----GKSTGRRMFTDVAGFDPDGN-LI 121 (1045)
T ss_dssp SEEEEEEECTTSSEEEEEEEEST---TCCEEEEEEEETT--TTEEEECCCCC-----EEEETTEECSEEEEECTTCC-EE
T ss_pred CcccCeEECCCCCEEEEEEeecc---CCCCCeEEEEECC--CCCeEEcccCC-----CcccccccccccccCCCCCE-EE
Confidence 34556778999999999875421 1234678887763 44566776544 334 7899999998 77
Q ss_pred EEecCCC---CCCeEEEEe-cCCcceEEEecC------------------------------------------------
Q 004149 115 VVRNPEN---ESPIQFELW-SQSQLEKEFHVP------------------------------------------------ 142 (771)
Q Consensus 115 ~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~------------------------------------------------ 142 (771)
|++.... ...++|.++ .++..++++...
T Consensus 122 ~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~ 201 (1045)
T 1k32_A 122 ISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVD 201 (1045)
T ss_dssp EEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEEC
T ss_pred EEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcC
Confidence 8776431 234577666 343322211100
Q ss_pred --------------------Cccccccc-------------CCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCC
Q 004149 143 --------------------QTVHGSVY-------------ADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGG 189 (771)
Q Consensus 143 --------------------~~~~g~~~-------------~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~ 189 (771)
.+....+| ....+..++|||||++|+|..... ...|+.. ....
T Consensus 202 ~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~---i~~~d~~-~~~l 277 (1045)
T 1k32_A 202 MSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGS---IYIFNPD-TEKI 277 (1045)
T ss_dssp CSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTE---EEEECTT-TCCE
T ss_pred CCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCE---EEEecCC-ceEe
Confidence 00000010 011233567888888888864211 0011110 0000
Q ss_pred CCCc-----------cCCCCCCccccc-CCcCcccCCccCceEEEEEccCCceeeccCCCCCC-ccceEEEecCCCCCcc
Q 004149 190 SSDK-----------DCNSWKGQGDWE-EDWGETYAGKRQPSLFVININSGEVQAVKGIPKSL-SVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 190 ~~~~-----------~~~~~~~~~~~~-~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~-~~~~~~wspDg~~~~~ 256 (771)
.... .+......+.|+ ||....+ ......|+++++.+++.+.+ ..... .+..++|| ||+.
T Consensus 278 ~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la-~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~s-dg~~--- 350 (1045)
T 1k32_A 278 EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIA-FVSRGQAFIQDVSGTYVLKV--PEPLRIRYVRRGGD-TKVA--- 350 (1045)
T ss_dssp EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEE-EEETTEEEEECTTSSBEEEC--SCCSCEEEEEECSS-SEEE---
T ss_pred eeeccCcccccccccccccccceeeecCCCCCEEE-EEEcCEEEEEcCCCCceEEc--cCCCcceEEeeeEc-CCCe---
Confidence 0000 011133456788 8854333 33477999999999988887 44444 67889999 9998
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeE-EEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEe
Q 004149 257 YLVFVGWSSETRKLGIKYCYNRPCALY-AVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLS 335 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~ 335 (771)
|+|.+. ..+|| ++++ .+++.+.++.+...+..+.|||||++|++.+
T Consensus 351 -l~~~s~---------------~~~l~~~~d~-----------------~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~ 397 (1045)
T 1k32_A 351 -FIHGTR---------------EGDFLGIYDY-----------------RTGKAEKFEENLGNVFAMGVDRNGKFAVVAN 397 (1045)
T ss_dssp -EEEEET---------------TEEEEEEEET-----------------TTCCEEECCCCCCSEEEEEECTTSSEEEEEE
T ss_pred -EEEEEC---------------CCceEEEEEC-----------------CCCCceEecCCccceeeeEECCCCCEEEEEC
Confidence 998872 23799 9998 7777888885556788999999999999987
Q ss_pred cCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeC-----
Q 004149 336 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG----- 410 (771)
Q Consensus 336 ~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~----- 410 (771)
.+. .|+++|+.+++.+.+.... ...+..++|||||++|++.+...
T Consensus 398 ~~~-----------~v~~~d~~tg~~~~~~~~~-------------------~~~v~~~~~SpDG~~la~~~~~~~~~~~ 447 (1045)
T 1k32_A 398 DRF-----------EIMTVDLETGKPTVIERSR-------------------EAMITDFTISDNSRFIAYGFPLKHGETD 447 (1045)
T ss_dssp TTS-----------EEEEEETTTCCEEEEEECS-------------------SSCCCCEEECTTSCEEEEEEEECSSTTC
T ss_pred CCC-----------eEEEEECCCCceEEeccCC-------------------CCCccceEECCCCCeEEEEecCcccccc
Confidence 652 5999999887654332111 01245789999999998877643
Q ss_pred --CeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCC
Q 004149 411 --SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSP 454 (771)
Q Consensus 411 --~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~ 454 (771)
....|+.+|+.+++...++........+.|++||+.|++.....
T Consensus 448 ~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~ 493 (1045)
T 1k32_A 448 GYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRS 493 (1045)
T ss_dssp SCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCC
T ss_pred CCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEeccc
Confidence 34679999999999888877655555678999999999877543
No 98
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=99.80 E-value=1.1e-18 Score=164.99 Aligned_cols=174 Identities=11% Similarity=0.138 Sum_probs=128.9
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCC
Q 004149 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 614 (771)
++.|+||++||.+.......+......|+++||.|+++|+||. |.+.... ......+++..+++++.+.. +
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~---g~s~~~~----~~~~~~~~~~~~~~~~~~~~--~ 72 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDL---DARRDLG----QLGDVRGRLQRLLEIARAAT--E 72 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHH---HTCGGGC----TTCCHHHHHHHHHHHHHHHH--T
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCC---CCCCCCC----CCCCHHHHHHHHHHHHHhcC--C
Confidence 4578999999977553322344778889999999999999984 3332111 11112344455666666553 3
Q ss_pred CCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhc
Q 004149 615 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSK 694 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (771)
.++++++|||+||.+++.++.++| ++++|+.+|......+ +
T Consensus 73 ~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~--------------------------~----------- 113 (176)
T 2qjw_A 73 KGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPL--------------------------P----------- 113 (176)
T ss_dssp TSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTB--------------------------C-----------
T ss_pred CCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCcccc--------------------------C-----------
Confidence 579999999999999999999988 9999999887542100 0
Q ss_pred CccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004149 695 SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 695 sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
.+.++++|+|+++|++|..+|++.++++++.+ +++++++ +++|.+. +...++.+.+.+||++
T Consensus 114 ----~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~-~~~H~~~--~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 114 ----ALDAAAVPISIVHAWHDELIPAADVIAWAQAR-----SARLLLV-DDGHRLG--AHVQAASRAFAELLQS 175 (176)
T ss_dssp ----CCCCCSSCEEEEEETTCSSSCHHHHHHHHHHH-----TCEEEEE-SSCTTCT--TCHHHHHHHHHHHHHT
T ss_pred ----cccccCCCEEEEEcCCCCccCHHHHHHHHHhC-----CceEEEe-CCCcccc--ccHHHHHHHHHHHHHh
Confidence 04567899999999999999999999998887 3688888 8999883 5566788888888864
No 99
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=99.80 E-value=2.8e-18 Score=171.03 Aligned_cols=194 Identities=17% Similarity=0.147 Sum_probs=137.3
Q ss_pred CCCCcEEEEEcCCCCCCCCCcchHHHHHHHHC-----CcEEEEECCCCCC------CCChhhhhc----CCCCccccchh
Q 004149 534 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV-----GYSLLIVNYRGSL------GFGEEALQS----LPGKVGSQDVN 598 (771)
Q Consensus 534 ~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~-----G~~V~~~d~rG~~------~~g~~~~~~----~~~~~~~~~~~ 598 (771)
.++.|+||++||.+.. ...|...+..|+.+ ||.|++++.++.. +.+..|... .........++
T Consensus 20 ~~~~p~vv~lHG~g~~--~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 97 (239)
T 3u0v_A 20 GRHSASLIFLHGSGDS--GQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESID 97 (239)
T ss_dssp SCCCEEEEEECCTTCC--HHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHH
T ss_pred CCCCcEEEEEecCCCc--hhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHH
Confidence 4568999999996654 33566677777765 6999999986421 111111110 00011112344
Q ss_pred hHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCC
Q 004149 599 DVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKG 675 (771)
Q Consensus 599 D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (771)
++.+.+..+++. ..++.++++|+|||+||++++.++.++|+.++++|+.+|..+....
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~------------------- 158 (239)
T 3u0v_A 98 VMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA------------------- 158 (239)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCH-------------------
T ss_pred HHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhH-------------------
Confidence 444444444332 3468899999999999999999999999999999999987542110
Q ss_pred CCcCCCCCChhhHHHHhhcCccccccCCCCc-EEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCC
Q 004149 676 KDSFTESPSVEDLTRFHSKSPISHISKVKTP-TIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQS 754 (771)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P-~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~ 754 (771)
..... ......+| +|++||++|..+|+++++.+++.+++.+.+++++++++++|.+.
T Consensus 159 -----------~~~~~-------~~~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~---- 216 (239)
T 3u0v_A 159 -----------VYQAL-------QKSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELS---- 216 (239)
T ss_dssp -----------HHHHH-------HHCCSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCC----
T ss_pred -----------HHHHH-------HhhccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC----
Confidence 00000 01233456 99999999999999999999999999999999999999999986
Q ss_pred hHHHHHHHHHHHHHHhC
Q 004149 755 DFESFLNIGLWFKKYCK 771 (771)
Q Consensus 755 ~~~~~~~i~~wl~~~l~ 771 (771)
.+..+.+.+||+++|+
T Consensus 217 -~~~~~~~~~~l~~~l~ 232 (239)
T 3u0v_A 217 -KTELDILKLWILTKLP 232 (239)
T ss_dssp -HHHHHHHHHHHHHHCC
T ss_pred -HHHHHHHHHHHHHhCC
Confidence 4678899999998874
No 100
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=99.80 E-value=5.6e-19 Score=183.22 Aligned_cols=216 Identities=17% Similarity=0.186 Sum_probs=146.5
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcc-hHHHHHHHHCCcEEEEECCCCCCC---------C--Ch
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY-SKSLAFLSSVGYSLLIVNYRGSLG---------F--GE 582 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~-~~~~~~la~~G~~V~~~d~rG~~~---------~--g~ 582 (771)
..++.++.+++|.|++. ..+.|+||++||++... ..| ......++++||.|+++|+|+... + |.
T Consensus 34 ~~~~~~l~~~~~~P~~~--~~~~p~vv~lHG~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~ 109 (304)
T 3d0k_A 34 RNADRPFTLNTYRPYGY--TPDRPVVVVQHGVLRNG--ADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTA 109 (304)
T ss_dssp -CTTCCEEEEEEECTTC--CTTSCEEEEECCTTCCH--HHHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCT
T ss_pred CCCCceEEEEEEeCCCC--CCCCcEEEEeCCCCCCH--HHHHHHHHHHHHHCCcEEEEeCCccccCCCccccccCccccc
Confidence 56788899999999743 34679999999987653 344 445677888999999999996411 1 11
Q ss_pred hhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCC-ceeEEEecC-CccchhhhhcCC
Q 004149 583 EALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD-KFVAAAARN-PLCNLALMVGTT 660 (771)
Q Consensus 583 ~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~-~~~a~v~~~-p~~~~~~~~~~~ 660 (771)
+. .........++|+.++++++.++..++.++|+|+|||+||++++.++.++|+ .++++|+.+ |..++...
T Consensus 110 s~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~~~~~~~---- 182 (304)
T 3d0k_A 110 AG---NPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGWYTLPTF---- 182 (304)
T ss_dssp TS---CBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSSCCCSST----
T ss_pred cC---CCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCcccccCCc----
Confidence 10 0111122346789999999998766889999999999999999999999985 788888655 55432211
Q ss_pred CCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccC-----------------cHHH
Q 004149 661 DIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVP-----------------VSNG 723 (771)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp-----------------~~~~ 723 (771)
...|. ++. ... ..+|......+++|+|++||+.|..+. .+.+
T Consensus 183 -~~~~~----~~~------~~~----------~~~~~~~~~~~~~p~li~~G~~D~~~~~p~~~~~~~~~~~~~~~~~~~ 241 (304)
T 3d0k_A 183 -EHRFP----EGL------DGV----------GLTEDHLARLLAYPMTILAGDQDIATDDPNLPSEPAALRQGPHRYARA 241 (304)
T ss_dssp -TSBTT----TSS------BTT----------TCCHHHHHHHHHSCCEEEEETTCCCC--CCSCCSHHHHTTCSSHHHHH
T ss_pred -cccCc----ccc------CCC----------CCCHHHHHhhhcCCEEEEEeCCCCCccccccccChhhhccCccHHHHH
Confidence 00000 000 000 012333333456899999999999742 3456
Q ss_pred HHHHHHHH----hCCCC--EEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004149 724 LQYARALR----EKGVE--TKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 724 ~~~~~~l~----~~g~~--~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
..+++.++ +.|++ ++++++|+++|.+. .....+.+||.+
T Consensus 242 ~~~~~~l~~~a~~~g~~~~~~~~~~pg~gH~~~------~~~~~~~~~~~~ 286 (304)
T 3d0k_A 242 RHYYEAGQRAAAQRGLPFGWQLQVVPGIGHDGQ------AMSQVCASLWFD 286 (304)
T ss_dssp HHHHHHHHHHHHHHTCCCCCEEEEETTCCSCHH------HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCcceEEEEeCCCCCchH------HHHHHHHHHHhh
Confidence 67777776 66776 99999999999873 456677777754
No 101
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=99.79 E-value=3.5e-19 Score=190.64 Aligned_cols=251 Identities=15% Similarity=0.150 Sum_probs=153.2
Q ss_pred cccCCCceEEEEEEecCCCC--CCCCCcEEEEEcCCCCCCCCC----cchHHHHHHHHCCcEEEEECCCCCCCCChhhhh
Q 004149 513 LTKGAQKPFEAIFVSSSHKK--DCSCDPLIVVLHGGPHSVSLS----SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ 586 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~--~~~~~p~vv~~HGg~~~~~~~----~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~ 586 (771)
+...+|..+.++.+.|.... ..++.|+||++||.+...... .+...+..|+++||.|+++|+||.+.+......
T Consensus 32 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G~S~~~~~~ 111 (377)
T 1k8q_A 32 VVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYY 111 (377)
T ss_dssp EECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCEESSS
T ss_pred eEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCCCCCCCCCCC
Confidence 34557888998888765211 113678999999976553210 122345588999999999999995443221000
Q ss_pred -cCCC---Cccc-cchh-hHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCC---ceeEEEecCCccchhhhh
Q 004149 587 -SLPG---KVGS-QDVN-DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD---KFVAAAARNPLCNLALMV 657 (771)
Q Consensus 587 -~~~~---~~~~-~~~~-D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~---~~~a~v~~~p~~~~~~~~ 657 (771)
.... .+.. ...+ |+.++++++.+.. +.++++|+||||||.+++.++.++|+ +++++|+.+|........
T Consensus 112 ~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~~--~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~~~~~~~~ 189 (377)
T 1k8q_A 112 SPDSVEFWAFSFDEMAKYDLPATIDFILKKT--GQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTE 189 (377)
T ss_dssp CTTSTTTTCCCHHHHHHTHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCSSCC
T ss_pred CCCcccccCccHHHHHhhhHHHHHHHHHHhc--CcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCchhcccch
Confidence 0000 1111 1234 7888888887752 45789999999999999999999998 899999999875422100
Q ss_pred ------------------cCCC-CCcchhhh----hc------------------cC-------CCCCc-CCCCCCh---
Q 004149 658 ------------------GTTD-IPDWCYVE----SY------------------GS-------KGKDS-FTESPSV--- 685 (771)
Q Consensus 658 ------------------~~~~-~~~~~~~~----~~------------------~~-------~~~~~-~~~~~~~--- 685 (771)
+... .+...... .. +. ..... +...+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (377)
T 1k8q_A 190 TLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSV 269 (377)
T ss_dssp SGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTCCCCEEH
T ss_pred hHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHHHHHHhccCCCCccH
Confidence 0000 00000000 00 00 00000 0000000
Q ss_pred h------------------------hHHHHhhcC-ccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEE-E
Q 004149 686 E------------------------DLTRFHSKS-PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK-V 739 (771)
Q Consensus 686 ~------------------------~~~~~~~~s-p~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~-~ 739 (771)
. ....+.... +...+.++++|+|+++|++|.++|++.++.+++.+.. .+ +
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~----~~~~ 345 (377)
T 1k8q_A 270 QNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPN----LIYH 345 (377)
T ss_dssp HHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCTT----EEEE
T ss_pred HHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHHHHHHHHhCcC----cccE
Confidence 0 111111111 2334788999999999999999999998888777654 44 8
Q ss_pred EEeCCCCccCCC--CCChHHHHHHHHHHHHHH
Q 004149 740 IVFPNDVHGIER--PQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 740 ~~~~~~~H~~~~--~~~~~~~~~~i~~wl~~~ 769 (771)
++++++||.... .+...++++.|.+||+++
T Consensus 346 ~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 377 (377)
T 1k8q_A 346 RKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp EEETTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred EecCCCCceEEEecCCcHHHHHHHHHHHhccC
Confidence 999999998653 455667889999999864
No 102
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=99.79 E-value=8.8e-19 Score=189.32 Aligned_cols=250 Identities=19% Similarity=0.216 Sum_probs=155.0
Q ss_pred cccccCCCceEEEEEEecCC---CCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHH----HCCc---EEEEECCCCCCCC
Q 004149 511 ANLTKGAQKPFEAIFVSSSH---KKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLS----SVGY---SLLIVNYRGSLGF 580 (771)
Q Consensus 511 ~~~~~~~g~~l~~~~~~P~~---~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la----~~G~---~V~~~d~rG~~~~ 580 (771)
.++...+|..+++..+.|.+ ..+.++.|+||++||.+.. ...|...+..|+ +.|| .|+++|+|| +
T Consensus 23 ~~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~--~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G---~ 97 (398)
T 2y6u_A 23 STLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMS--KVVWEYYLPRLVAADAEGNYAIDKVLLIDQVN---H 97 (398)
T ss_dssp SBSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCC--GGGGGGGGGGSCCCBTTTTEEEEEEEEECCTT---S
T ss_pred ccccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCc--HHHHHHHHHHHHHhhhhcCcceeEEEEEcCCC---C
Confidence 34566789999999998863 1123456899999997765 346777777787 4589 999999999 6
Q ss_pred ChhhhhcCCCCccccc----hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhh
Q 004149 581 GEEALQSLPGKVGSQD----VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM 656 (771)
Q Consensus 581 g~~~~~~~~~~~~~~~----~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~ 656 (771)
|.+............. ++|+.+.++.+.....+++.+++|+||||||.+++.++.++|++++++|+.+|.......
T Consensus 98 G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 177 (398)
T 2y6u_A 98 GDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKA 177 (398)
T ss_dssp HHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCC
T ss_pred CCCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEeccccccccc
Confidence 6664321110011122 344444444332111134456999999999999999999999999999999987653110
Q ss_pred hc--CCCCCc----c--hhhhhccCCC-------------C--CcCCCCCChhhHHHHhh--------------------
Q 004149 657 VG--TTDIPD----W--CYVESYGSKG-------------K--DSFTESPSVEDLTRFHS-------------------- 693 (771)
Q Consensus 657 ~~--~~~~~~----~--~~~~~~~~~~-------------~--~~~~~~~~~~~~~~~~~-------------------- 693 (771)
.. ....+. + .+...+.... . ..+...........+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (398)
T 2y6u_A 178 IGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKM 257 (398)
T ss_dssp CSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEEESS
T ss_pred cccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceEecC
Confidence 00 000000 0 0000000000 0 00000011111111100
Q ss_pred ----------------cCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHH
Q 004149 694 ----------------KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFE 757 (771)
Q Consensus 694 ----------------~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~ 757 (771)
......+.++++|+|+++|++|.++|++.++.+++.+. .+++++++++||.+.. +...+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~----~~~~~~~~~~gH~~~~-e~p~~ 332 (398)
T 2y6u_A 258 EQAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQ----NYHLDVIPGGSHLVNV-EAPDL 332 (398)
T ss_dssp CHHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHCS----SEEEEEETTCCTTHHH-HSHHH
T ss_pred CchhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhCC----CceEEEeCCCCccchh-cCHHH
Confidence 01124567889999999999999999998888777664 4899999999997653 34567
Q ss_pred HHHHHHHHHHHHh
Q 004149 758 SFLNIGLWFKKYC 770 (771)
Q Consensus 758 ~~~~i~~wl~~~l 770 (771)
+.+.+.+||++++
T Consensus 333 ~~~~i~~fl~~~~ 345 (398)
T 2y6u_A 333 VIERINHHIHEFV 345 (398)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8899999998875
No 103
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=99.79 E-value=1.2e-18 Score=179.97 Aligned_cols=220 Identities=11% Similarity=0.119 Sum_probs=137.2
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcc-
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG- 593 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~- 593 (771)
..+|..++++.+.|.+. ..++.|+||++||.+.. ...|...+..|+++||.|+++|+||.. |.+... ...+.
T Consensus 14 ~~dG~~l~~~~~~p~~~-~~~~~~~VvllHG~g~~--~~~~~~~~~~L~~~G~~Vi~~D~rGh~--G~S~~~--~~~~~~ 86 (305)
T 1tht_A 14 VNNGQELHVWETPPKEN-VPFKNNTILIASGFARR--MDHFAGLAEYLSTNGFHVFRYDSLHHV--GLSSGS--IDEFTM 86 (305)
T ss_dssp ETTTEEEEEEEECCCTT-SCCCSCEEEEECTTCGG--GGGGHHHHHHHHTTTCCEEEECCCBCC------------CCCH
T ss_pred cCCCCEEEEEEecCccc-CCCCCCEEEEecCCccC--chHHHHHHHHHHHCCCEEEEeeCCCCC--CCCCCc--ccceeh
Confidence 44678899888877531 12356899999996654 347888999999999999999999941 333211 11111
Q ss_pred ccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchh--hhhc
Q 004149 594 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCY--VESY 671 (771)
Q Consensus 594 ~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~--~~~~ 671 (771)
....+|+.++++++.+. +.++++|+||||||.+++.++.+ | +++++|+.++..+............+.. ....
T Consensus 87 ~~~~~D~~~~~~~l~~~---~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (305)
T 1tht_A 87 TTGKNSLCTVYHWLQTK---GTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRDTLEKALGFDYLSLPIDEL 161 (305)
T ss_dssp HHHHHHHHHHHHHHHHT---TCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHHHHHHHHSSCGGGSCGGGC
T ss_pred HHHHHHHHHHHHHHHhC---CCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHHHHHHHhhhhhhhcchhhC
Confidence 12257788888888743 34789999999999999999988 7 7899998887654321110000000000 0000
Q ss_pred cCCCCCcCCCCC-Chhh-HHHHhhc------CccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeC
Q 004149 672 GSKGKDSFTESP-SVED-LTRFHSK------SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFP 743 (771)
Q Consensus 672 ~~~~~~~~~~~~-~~~~-~~~~~~~------sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~ 743 (771)
.. ... +.... .... ....... +....+.++++|+|+++|++|..+|++.++.+++.+.. .++++++++
T Consensus 162 ~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i~~--~~~~l~~i~ 237 (305)
T 1tht_A 162 PN-DLD-FEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRT--GHCKLYSLL 237 (305)
T ss_dssp CS-EEE-ETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTT--CCEEEEEET
T ss_pred cc-ccc-ccccccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhcCC--CCcEEEEeC
Confidence 00 000 00000 0000 0111111 12345778999999999999999999988887765532 348999999
Q ss_pred CCCccCC
Q 004149 744 NDVHGIE 750 (771)
Q Consensus 744 ~~~H~~~ 750 (771)
++||.+.
T Consensus 238 ~agH~~~ 244 (305)
T 1tht_A 238 GSSHDLG 244 (305)
T ss_dssp TCCSCTT
T ss_pred CCCCchh
Confidence 9999875
No 104
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=99.79 E-value=3.5e-18 Score=180.26 Aligned_cols=253 Identities=15% Similarity=0.052 Sum_probs=153.2
Q ss_pred ccccCCC--ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-Cc-----chHHHHHHH-HCCcEEEEECCCCCCCCCh
Q 004149 512 NLTKGAQ--KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SS-----YSKSLAFLS-SVGYSLLIVNYRGSLGFGE 582 (771)
Q Consensus 512 ~~~~~~g--~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~-~~-----~~~~~~~la-~~G~~V~~~d~rG~~~~g~ 582 (771)
...+.+| ..+.++++.|.+. .++.|+|++.||....... .. ....+..|+ ++||+|+++||||.++++.
T Consensus 49 ~s~d~~G~~~~~~g~l~~P~~~--~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~ 126 (377)
T 4ezi_A 49 KTQSPDGNLTIASGLVAMPIHP--VGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNEL 126 (377)
T ss_dssp EEECTTSCEEEEEEEEEEESSC--SSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCC
T ss_pred EEECCCCCEEEEEEEEEECCCC--CCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCC
Confidence 4444445 5588999999853 4678999999997642211 11 123456678 9999999999999766543
Q ss_pred hhhhcCCCCccccchhhHHHHHHHHHHc-CCCCCCeEEEEEcChhHHHHHHHHHhCC----C-ceeEEEecCCccchhhh
Q 004149 583 EALQSLPGKVGSQDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAP----D-KFVAAAARNPLCNLALM 656 (771)
Q Consensus 583 ~~~~~~~~~~~~~~~~D~~~~i~~l~~~-~~~d~~ri~l~G~S~GG~~a~~~a~~~p----~-~~~a~v~~~p~~~~~~~ 656 (771)
....-.........+.|..+++..+.+. +..+.++|+++|||+||++++.++..+| + .+++++..++..++...
T Consensus 127 ~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~dl~~~ 206 (377)
T 4ezi_A 127 TLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYGWEET 206 (377)
T ss_dssp SSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCCHHHH
T ss_pred CCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccCHHHH
Confidence 1100000000111233444444444333 3235689999999999999999988754 3 58899999988876532
Q ss_pred hcCCC---C-C--cch----------------hhhhccCCCC-------C----------cCC----CCCChhhHHHHh-
Q 004149 657 VGTTD---I-P--DWC----------------YVESYGSKGK-------D----------SFT----ESPSVEDLTRFH- 692 (771)
Q Consensus 657 ~~~~~---~-~--~~~----------------~~~~~~~~~~-------~----------~~~----~~~~~~~~~~~~- 692 (771)
....+ . . .+. ....+..... . .+. ..........+.
T Consensus 207 ~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (377)
T 4ezi_A 207 MHFVMLEPGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPLLIFQPKFSNGIIS 286 (377)
T ss_dssp HHHHHHSCCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGGGGBCHHHHHHHHT
T ss_pred HHHHhcCCCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHHHHhchhhhhhccc
Confidence 21100 0 0 000 0000000000 0 000 000000000000
Q ss_pred hcCc-cc--------cccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCC--CCccCCCCCChHHHHHH
Q 004149 693 SKSP-IS--------HISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN--DVHGIERPQSDFESFLN 761 (771)
Q Consensus 693 ~~sp-~~--------~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~--~~H~~~~~~~~~~~~~~ 761 (771)
..+| +. .-.++++|+||+||++|.+||+.+++++++++++.|. ++++.+++ .+|... ....+..
T Consensus 287 ~~~p~~~~~l~~~~~~~~~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~-v~~~~~~~~~~~H~~~----~~~~~~~ 361 (377)
T 4ezi_A 287 KTDRNTEILKINFNHYDFKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSD-FVWIKSVSDALDHVQA----HPFVLKE 361 (377)
T ss_dssp TCSTTHHHHHHHHCCCCSCCSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCS-CEEEEESCSSCCTTTT----HHHHHHH
T ss_pred ccchHHHHHHHHhcccCCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCC-EEEEEcCCCCCCccCh----HHHHHHH
Confidence 0122 10 1125679999999999999999999999999999999 99999999 899754 3567889
Q ss_pred HHHHHHHHhC
Q 004149 762 IGLWFKKYCK 771 (771)
Q Consensus 762 i~~wl~~~l~ 771 (771)
+++||+++++
T Consensus 362 ~~~wl~~~~~ 371 (377)
T 4ezi_A 362 QVDFFKQFER 371 (377)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhhc
Confidence 9999999864
No 105
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=99.79 E-value=7.9e-19 Score=176.55 Aligned_cols=185 Identities=17% Similarity=0.116 Sum_probs=135.6
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEE--CCCCCCCCChhhh-hcCCCC--ccccchhhHHHHHHHHHH
Q 004149 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIV--NYRGSLGFGEEAL-QSLPGK--VGSQDVNDVLTAIDHVID 609 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~--d~rG~~~~g~~~~-~~~~~~--~~~~~~~D~~~~i~~l~~ 609 (771)
++.|+||++||++.. ...|...+..|++ +|.|+++ |++|.++++.... ...... .....++|+.++++++.+
T Consensus 60 ~~~p~vv~~HG~~~~--~~~~~~~~~~l~~-~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 136 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGD--ENQFFDFGARLLP-QATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANRE 136 (251)
T ss_dssp TTSCEEEEECCTTCC--HHHHHHHHHHHST-TSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCC--HhHHHHHHHhcCC-CceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHHHHh
Confidence 567999999997754 3456667777766 5999999 6777443211000 000000 011235677777777766
Q ss_pred cCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCCcCCCCCChhhHH
Q 004149 610 MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLT 689 (771)
Q Consensus 610 ~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (771)
+. +.++++|+|||+||++++.++.++|++++++|+.+|......
T Consensus 137 ~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~---------------------------------- 180 (251)
T 2r8b_A 137 HY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP---------------------------------- 180 (251)
T ss_dssp HH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC----------------------------------
T ss_pred cc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc----------------------------------
Confidence 53 678999999999999999999999999999999998753210
Q ss_pred HHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHH
Q 004149 690 RFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 690 ~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 769 (771)
......+++|+|+++|++|.++|++.++++++.+++.+.++++ .+++++|.+. .+..+.+.+||+++
T Consensus 181 -------~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~~ 247 (251)
T 2r8b_A 181 -------KISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVET-VWHPGGHEIR-----SGEIDAVRGFLAAY 247 (251)
T ss_dssp -------CCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEE-EEESSCSSCC-----HHHHHHHHHHHGGG
T ss_pred -------cccccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEE-EecCCCCccC-----HHHHHHHHHHHHHh
Confidence 0112345789999999999999999999999999987777777 5667899874 45678999999988
Q ss_pred hC
Q 004149 770 CK 771 (771)
Q Consensus 770 l~ 771 (771)
|+
T Consensus 248 l~ 249 (251)
T 2r8b_A 248 GG 249 (251)
T ss_dssp C-
T ss_pred cC
Confidence 74
No 106
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=99.79 E-value=8.3e-18 Score=171.34 Aligned_cols=230 Identities=13% Similarity=0.125 Sum_probs=143.4
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCC-cc-hHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SY-SKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~-~~-~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
+|.++ .+|.|+. ++.|+||++|||++..... .+ ......+++.||.|+++|||+.+++ ...
T Consensus 13 ~~~~~--~~y~p~~----~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~-----------~~p 75 (274)
T 2qru_A 13 NGATV--TIYPTTT----EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNT-----------KID 75 (274)
T ss_dssp TSCEE--EEECCSS----SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTS-----------CHH
T ss_pred CCeeE--EEEcCCC----CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCC-----------CCc
Confidence 34444 5777762 5679999999998755332 33 4456678889999999999986542 223
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHH---hCCCceeEEEecCCccchhhhhcCCC--CCc--chh
Q 004149 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIG---QAPDKFVAAAARNPLCNLALMVGTTD--IPD--WCY 667 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~---~~p~~~~a~v~~~p~~~~~~~~~~~~--~~~--~~~ 667 (771)
..++|+.++++|+.++.. ++++|+|+|+|+||.+|+.++. ..+..++++++.+|..+......... .+. ...
T Consensus 76 ~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (274)
T 2qru_A 76 HILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKLLKQAISAKE 154 (274)
T ss_dssp HHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCSCSSCCCSGG
T ss_pred HHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhhccccccHHH
Confidence 458999999999998742 2689999999999999999987 35677889998888776221110000 000 000
Q ss_pred hhhc-cCCCCCcCCCCCChh---------hHHHHhh--------cCcc--ccccCCCCcEEEEeeCCCCccCcHHHHHHH
Q 004149 668 VESY-GSKGKDSFTESPSVE---------DLTRFHS--------KSPI--SHISKVKTPTIFLLGAQDLRVPVSNGLQYA 727 (771)
Q Consensus 668 ~~~~-~~~~~~~~~~~~~~~---------~~~~~~~--------~sp~--~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~ 727 (771)
...+ .......-....... .+..+.. ..+. ..+.++ +|+||++|+.|+.++..+++++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G~~D~~~~~~~~~~l~ 233 (274)
T 2qru_A 155 IAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTF-PPCFSTASSSDEEVPFRYSKKIG 233 (274)
T ss_dssp GTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEETTCSSSCTHHHHHHH
T ss_pred HhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhcCC-CCEEEEEecCCCCcCHHHHHHHH
Confidence 0000 000000000000000 0000000 0001 123455 89999999999999888777776
Q ss_pred HHHHhCCCCEEEEEeCCCCccCCCC---CChHHHHHHHHHHHHHH
Q 004149 728 RALREKGVETKVIVFPNDVHGIERP---QSDFESFLNIGLWFKKY 769 (771)
Q Consensus 728 ~~l~~~g~~~~~~~~~~~~H~~~~~---~~~~~~~~~i~~wl~~~ 769 (771)
+++ .+++++++++++|++... ....++++.+.+||+++
T Consensus 234 ~~~----~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 274 (274)
T 2qru_A 234 RTI----PESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKER 274 (274)
T ss_dssp HHS----TTCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred HhC----CCcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhhC
Confidence 655 357999999999997532 12235678889998753
No 107
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=99.78 E-value=1.9e-18 Score=174.56 Aligned_cols=184 Identities=15% Similarity=0.060 Sum_probs=137.1
Q ss_pred EEEEecCCCCC-CCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHH
Q 004149 523 AIFVSSSHKKD-CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVL 601 (771)
Q Consensus 523 ~~~~~P~~~~~-~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~ 601 (771)
+.+|.|..... +++.|+||++||++.. ...|...+..|+++||.|+++|+|++. ...|+.
T Consensus 34 ~~~~~p~~~~~~g~~~p~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~~s~-----------------~~~~~~ 94 (258)
T 2fx5_A 34 CRIYRPRDLGQGGVRHPVILWGNGTGAG--PSTYAGLLSHWASHGFVVAAAETSNAG-----------------TGREML 94 (258)
T ss_dssp EEEEEESSTTGGGCCEEEEEEECCTTCC--GGGGHHHHHHHHHHTCEEEEECCSCCT-----------------TSHHHH
T ss_pred EEEEeCCCCcccCCCceEEEEECCCCCC--chhHHHHHHHHHhCCeEEEEecCCCCc-----------------cHHHHH
Confidence 67888874211 2378999999997764 457788889999999999999999631 134555
Q ss_pred HHHHHHHHc---------CCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhcc
Q 004149 602 TAIDHVIDM---------GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 672 (771)
Q Consensus 602 ~~i~~l~~~---------~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~ 672 (771)
.+++++.+. ..++.++++|+||||||.+++.++ .+++++++++.+|....
T Consensus 95 ~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~------------------- 153 (258)
T 2fx5_A 95 ACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLG------------------- 153 (258)
T ss_dssp HHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSS-------------------
T ss_pred HHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCcccc-------------------
Confidence 566666542 235678999999999999999887 35689999987774310
Q ss_pred CCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHH-HHHHHHHHHhCCCCEEEEEeCCCCccCCC
Q 004149 673 SKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSN-GLQYARALREKGVETKVIVFPNDVHGIER 751 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~-~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 751 (771)
.+. ....+.++++|+|+++|++|.++|+.. +..+++. .+.+++++++++++|.+..
T Consensus 154 ---------~~~-----------~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~H~~~~ 210 (258)
T 2fx5_A 154 ---------LGH-----------DSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRR---ANVPVFWGERRYVSHFEPV 210 (258)
T ss_dssp ---------TTC-----------CGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHH---CSSCEEEEEESSCCTTSST
T ss_pred ---------ccc-----------chhhhccCCCCEEEEEcCCCcccCchhhHHHHHhc---cCCCeEEEEECCCCCcccc
Confidence 000 012456788999999999999999886 7777665 3467999999999998775
Q ss_pred CCChHHHHHHHHHHHHHHh
Q 004149 752 PQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 752 ~~~~~~~~~~i~~wl~~~l 770 (771)
... .++.+.+.+||+++|
T Consensus 211 ~~~-~~~~~~i~~fl~~~l 228 (258)
T 2fx5_A 211 GSG-GAYRGPSTAWFRFQL 228 (258)
T ss_dssp TTC-GGGHHHHHHHHHHHH
T ss_pred chH-HHHHHHHHHHHHHHh
Confidence 443 377889999999776
No 108
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=99.78 E-value=4.3e-19 Score=173.02 Aligned_cols=191 Identities=15% Similarity=0.215 Sum_probs=138.1
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchH--HHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcc
Q 004149 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK--SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~--~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~ 593 (771)
.+|.+++++.+.|. ..++.|+||++||++.. ...|.. .+..|+++||.|+++|+|| +|.+.........
T Consensus 14 ~~g~~l~~~~~~p~---~~~~~~~vv~~hG~~~~--~~~~~~~~~~~~l~~~G~~v~~~d~~g---~g~s~~~~~~~~~- 84 (210)
T 1imj_A 14 VQGQALFFREALPG---SGQARFSVLLLHGIRFS--SETWQNLGTLHRLAQAGYRAVAIDLPG---LGHSKEAAAPAPI- 84 (210)
T ss_dssp ETTEEECEEEEECS---SSCCSCEEEECCCTTCC--HHHHHHHTHHHHHHHTTCEEEEECCTT---SGGGTTSCCSSCT-
T ss_pred eCCeEEEEEEeCCC---CCCCCceEEEECCCCCc--cceeecchhHHHHHHCCCeEEEecCCC---CCCCCCCCCcchh-
Confidence 46888999999886 34567999999997654 335555 4788999999999999999 5544322111111
Q ss_pred ccch--hhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhc
Q 004149 594 SQDV--NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESY 671 (771)
Q Consensus 594 ~~~~--~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 671 (771)
.... +++...++.+ +.++++++|||+||.+++.++.++|++++++++.+|.....
T Consensus 85 ~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~----------------- 141 (210)
T 1imj_A 85 GELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK----------------- 141 (210)
T ss_dssp TSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG-----------------
T ss_pred hhcchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc-----------------
Confidence 1112 4555555443 34689999999999999999999999999999998874310
Q ss_pred cCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCC
Q 004149 672 GSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER 751 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~ 751 (771)
.....+.++++|+|+++|++|. ++++.++.+ +.+ .+.++.++++++|.+..
T Consensus 142 -----------------------~~~~~~~~~~~p~l~i~g~~D~-~~~~~~~~~-~~~----~~~~~~~~~~~~H~~~~ 192 (210)
T 1imj_A 142 -----------------------INAANYASVKTPALIVYGDQDP-MGQTSFEHL-KQL----PNHRVLIMKGAGHPCYL 192 (210)
T ss_dssp -----------------------SCHHHHHTCCSCEEEEEETTCH-HHHHHHHHH-TTS----SSEEEEEETTCCTTHHH
T ss_pred -----------------------ccchhhhhCCCCEEEEEcCccc-CCHHHHHHH-hhC----CCCCEEEecCCCcchhh
Confidence 0112335678999999999999 987776665 443 35899999999998643
Q ss_pred CCChHHHHHHHHHHHHH
Q 004149 752 PQSDFESFLNIGLWFKK 768 (771)
Q Consensus 752 ~~~~~~~~~~i~~wl~~ 768 (771)
+...++.+.+.+||++
T Consensus 193 -~~~~~~~~~i~~fl~~ 208 (210)
T 1imj_A 193 -DKPEEWHTGLLDFLQG 208 (210)
T ss_dssp -HCHHHHHHHHHHHHHT
T ss_pred -cCHHHHHHHHHHHHHh
Confidence 3345678888889875
No 109
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=99.78 E-value=3.4e-18 Score=179.07 Aligned_cols=200 Identities=13% Similarity=0.146 Sum_probs=143.8
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcch-------HHHHHHHHCCcEEEEECCCCCCCCChhhhhcC----
Q 004149 520 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS-------KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL---- 588 (771)
Q Consensus 520 ~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~-------~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~---- 588 (771)
.+...++.|.. .+.|+||++||++.. ...|. ..+..|+++||.|+++|+||.+.++.......
T Consensus 49 ~~~~~~~~p~~----~~~~~vvl~HG~g~~--~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~ 122 (328)
T 1qlw_A 49 QMYVRYQIPQR----AKRYPITLIHGCCLT--GMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKL 122 (328)
T ss_dssp CEEEEEEEETT----CCSSCEEEECCTTCC--GGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHT
T ss_pred eEEEEEEccCC----CCCccEEEEeCCCCC--CCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccc
Confidence 35556667752 234679999997754 33455 37888999999999999999554432211000
Q ss_pred ------------------------CC-Ccc---------ccchhh------------------HHHHHHHHHHcCCCCCC
Q 004149 589 ------------------------PG-KVG---------SQDVND------------------VLTAIDHVIDMGLANPS 616 (771)
Q Consensus 589 ------------------------~~-~~~---------~~~~~D------------------~~~~i~~l~~~~~~d~~ 616 (771)
.+ .+. ...+++ +.+++..+.++. +
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~----~ 198 (328)
T 1qlw_A 123 GKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKL----D 198 (328)
T ss_dssp TSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHH----T
T ss_pred cccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHh----C
Confidence 00 000 000122 556666666552 3
Q ss_pred eEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCc
Q 004149 617 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSP 696 (771)
Q Consensus 617 ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 696 (771)
+++|+|||+||.+++.++.++|++++++|+.+|... ..+
T Consensus 199 ~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~-----------------------------------------~~~ 237 (328)
T 1qlw_A 199 GTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC-----------------------------------------PKP 237 (328)
T ss_dssp SEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC-----------------------------------------CCG
T ss_pred CceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC-----------------------------------------CCH
Confidence 899999999999999999999999999999987530 001
Q ss_pred cccccCCCCcEEEEeeCCCCccCc-----HHHHHHHHHHHhCCCCEEEEEeCCCC-----ccCCCCCChHHHHHHHHHHH
Q 004149 697 ISHISKVKTPTIFLLGAQDLRVPV-----SNGLQYARALREKGVETKVIVFPNDV-----HGIERPQSDFESFLNIGLWF 766 (771)
Q Consensus 697 ~~~~~~i~~P~Lii~G~~D~~vp~-----~~~~~~~~~l~~~g~~~~~~~~~~~~-----H~~~~~~~~~~~~~~i~~wl 766 (771)
......+++|+|+++|++|..+|+ +.++.+++.+++.|.++++++++++| |.+....+..++.+.+.+||
T Consensus 238 ~~~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl 317 (328)
T 1qlw_A 238 EDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWI 317 (328)
T ss_dssp GGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHH
T ss_pred HHHhhccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHH
Confidence 111223568999999999999997 99999999999988899999999665 98876665678999999999
Q ss_pred HHHh
Q 004149 767 KKYC 770 (771)
Q Consensus 767 ~~~l 770 (771)
++++
T Consensus 318 ~~~~ 321 (328)
T 1qlw_A 318 GRNT 321 (328)
T ss_dssp HHTC
T ss_pred Hhcc
Confidence 9875
No 110
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=99.77 E-value=1.2e-17 Score=168.48 Aligned_cols=222 Identities=12% Similarity=0.129 Sum_probs=142.5
Q ss_pred cccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCc
Q 004149 513 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 592 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~ 592 (771)
+...+|.++.+.... +.|+||++||++.. ...|...+..|+ .||.|+++|+||.+ .+...
T Consensus 7 ~~~~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~l~-~~~~vi~~d~~G~G---~S~~~------ 66 (262)
T 3r0v_A 7 VPSSDGTPIAFERSG--------SGPPVVLVGGALST--RAGGAPLAERLA-PHFTVICYDRRGRG---DSGDT------ 66 (262)
T ss_dssp EECTTSCEEEEEEEE--------CSSEEEEECCTTCC--GGGGHHHHHHHT-TTSEEEEECCTTST---TCCCC------
T ss_pred EEcCCCcEEEEEEcC--------CCCcEEEECCCCcC--hHHHHHHHHHHh-cCcEEEEEecCCCc---CCCCC------
Confidence 344567788765543 14789999997765 346777888887 89999999999954 33211
Q ss_pred cccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcch--hhhh
Q 004149 593 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWC--YVES 670 (771)
Q Consensus 593 ~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~--~~~~ 670 (771)
.....+++.+.+..+++.. + +++.|+|||+||.+++.++.++| +++++|+.+|............ ..+. ....
T Consensus 67 ~~~~~~~~~~~~~~~~~~l--~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~ 141 (262)
T 3r0v_A 67 PPYAVEREIEDLAAIIDAA--G-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVP-PDYQTRLDAL 141 (262)
T ss_dssp SSCCHHHHHHHHHHHHHHT--T-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCC-TTHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhc--C-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhh-hHHHHHHHHH
Confidence 1234566666555555552 4 78999999999999999999999 9999999998654321110000 0000 0000
Q ss_pred ccC--------CCCCcCCCCCChhhHHHHh------------------------hcCccccccCCCCcEEEEeeCCCCcc
Q 004149 671 YGS--------KGKDSFTESPSVEDLTRFH------------------------SKSPISHISKVKTPTIFLLGAQDLRV 718 (771)
Q Consensus 671 ~~~--------~~~~~~~~~~~~~~~~~~~------------------------~~sp~~~~~~i~~P~Lii~G~~D~~v 718 (771)
... ......... ..+....+. ...+...+.++++|+|+++|++|..+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 220 (262)
T 3r0v_A 142 LAEGRRGDAVTYFMTEGVGV-PPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPAW 220 (262)
T ss_dssp HHTTCHHHHHHHHHHHTSCC-CHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCHH
T ss_pred hhccchhhHHHHHhhcccCC-CHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCCC
Confidence 000 000000000 001111110 11234557788999999999999999
Q ss_pred CcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004149 719 PVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 719 p~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
|++.+..+.+.+.+ +++++++++||. +...++.+.+.+||++
T Consensus 221 ~~~~~~~~~~~~~~----~~~~~~~~~gH~----~~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 221 IRHTAQELADTIPN----ARYVTLENQTHT----VAPDAIAPVLVEFFTR 262 (262)
T ss_dssp HHHHHHHHHHHSTT----EEEEECCCSSSS----CCHHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHhCCC----CeEEEecCCCcc----cCHHHHHHHHHHHHhC
Confidence 99888888877643 799999999993 3456788888888853
No 111
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=99.77 E-value=2.4e-18 Score=175.12 Aligned_cols=230 Identities=17% Similarity=0.187 Sum_probs=135.3
Q ss_pred ccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcc
Q 004149 514 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 514 ~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~ 593 (771)
...+|..+++..+- ..|.||++||.+.+ ...|...+..|+++||.|+++|+||. |.+... ..
T Consensus 4 ~~~~g~~l~y~~~G--------~g~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G~---G~S~~~-----~~ 65 (271)
T 3ia2_A 4 VAKDGTQIYFKDWG--------SGKPVLFSHGWLLD--ADMWEYQMEYLSSRGYRTIAFDRRGF---GRSDQP-----WT 65 (271)
T ss_dssp ECTTSCEEEEEEES--------SSSEEEEECCTTCC--GGGGHHHHHHHHTTTCEEEEECCTTS---TTSCCC-----SS
T ss_pred EcCCCCEEEEEccC--------CCCeEEEECCCCCc--HHHHHHHHHHHHhCCceEEEecCCCC---ccCCCC-----CC
Confidence 34567777655442 23568999997655 45788888999999999999999994 443211 11
Q ss_pred ccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHh-CCCceeEEEecCCccchhhhhc--CCCCCc-c----
Q 004149 594 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPLCNLALMVG--TTDIPD-W---- 665 (771)
Q Consensus 594 ~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~-~p~~~~a~v~~~p~~~~~~~~~--~~~~~~-~---- 665 (771)
....+++.+.+..+++. ++.+++.|+||||||.+++.++++ .|++++++|+.++......... ....+. .
T Consensus 66 ~~~~~~~a~d~~~~l~~--l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (271)
T 3ia2_A 66 GNDYDTFADDIAQLIEH--LDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARF 143 (271)
T ss_dssp CCSHHHHHHHHHHHHHH--HTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH--hCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHHHHH
Confidence 12333443333333333 235789999999999877666555 4899999999876432110000 000000 0
Q ss_pred ---------hhhhhccCCCCCcC-CCCCChhh-------------------HHHHhhcCccccccCCCCcEEEEeeCCCC
Q 004149 666 ---------CYVESYGSKGKDSF-TESPSVED-------------------LTRFHSKSPISHISKVKTPTIFLLGAQDL 716 (771)
Q Consensus 666 ---------~~~~~~~~~~~~~~-~~~~~~~~-------------------~~~~~~~sp~~~~~~i~~P~Lii~G~~D~ 716 (771)
.+...+........ ........ ...+...+....+.++++|+|+++|++|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~ 223 (271)
T 3ia2_A 144 KTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQ 223 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTTCCSCEEEEEETTCS
T ss_pred HHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccccCCCCCEEEEEeCCCC
Confidence 00000000000000 00000000 00111122233467899999999999999
Q ss_pred ccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004149 717 RVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 717 ~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 767 (771)
++|++.+.+++..+. ...++.+++++||.+.. +...++.+.+.+||+
T Consensus 224 ~~p~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 224 IVPFETTGKVAAELI---KGAELKVYKDAPHGFAV-THAQQLNEDLLAFLK 270 (271)
T ss_dssp SSCGGGTHHHHHHHS---TTCEEEEETTCCTTHHH-HTHHHHHHHHHHHHT
T ss_pred cCChHHHHHHHHHhC---CCceEEEEcCCCCcccc-cCHHHHHHHHHHHhh
Confidence 999988555544432 24799999999998763 445678888888885
No 112
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=99.77 E-value=3.2e-18 Score=171.61 Aligned_cols=218 Identities=17% Similarity=0.216 Sum_probs=134.8
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCC
Q 004149 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 616 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 616 (771)
.|.||++||.+.+ ...|...+..|+++||.|+++|+||. |.+........ .....+|+.++++++.+.+ .+
T Consensus 16 ~~~vvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~Gh---G~s~~~~~~~~-~~~~~~d~~~~~~~l~~~~---~~ 86 (247)
T 1tqh_A 16 ERAVLLLHGFTGN--SADVRMLGRFLESKGYTCHAPIYKGH---GVPPEELVHTG-PDDWWQDVMNGYEFLKNKG---YE 86 (247)
T ss_dssp SCEEEEECCTTCC--THHHHHHHHHHHHTTCEEEECCCTTS---SSCHHHHTTCC-HHHHHHHHHHHHHHHHHHT---CC
T ss_pred CcEEEEECCCCCC--hHHHHHHHHHHHHCCCEEEecccCCC---CCCHHHhcCCC-HHHHHHHHHHHHHHHHHcC---CC
Confidence 3679999997654 44677788899999999999999994 43321111111 1112456666667776553 36
Q ss_pred eEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccch---hhhhc-CCCCCcchhhhhccCC------CCCcCCCCC--C
Q 004149 617 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL---ALMVG-TTDIPDWCYVESYGSK------GKDSFTESP--S 684 (771)
Q Consensus 617 ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~---~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~--~ 684 (771)
++.|+||||||.+++.++.++| ++++|+.++.... ..... ...... .+....... ....+...+ .
T Consensus 87 ~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (247)
T 1tqh_A 87 KIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYAR-EYKKREGKSEEQIEQEMEKFKQTPMKT 163 (247)
T ss_dssp CEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHHH-HHHHHHTCCHHHHHHHHHHHTTSCCTT
T ss_pred eEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHHH-HhhcccccchHHHHhhhhcccCCCHHH
Confidence 8999999999999999999988 7777765432210 00000 000000 000000000 000000000 0
Q ss_pred hhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHH
Q 004149 685 VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGL 764 (771)
Q Consensus 685 ~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~ 764 (771)
......+. .+....+.++++|+|+++|++|..+|++.++.+++.+.. ..+++++++++||.....+...++.+.+.+
T Consensus 164 ~~~~~~~~-~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~~~~~~~~~i~~ 240 (247)
T 1tqh_A 164 LKALQELI-ADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIES--PVKQIKWYEQSGHVITLDQEKDQLHEDIYA 240 (247)
T ss_dssp HHHHHHHH-HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCC--SSEEEEEETTCCSSGGGSTTHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCC--CceEEEEeCCCceeeccCccHHHHHHHHHH
Confidence 01111110 122345778999999999999999999999888877653 247999999999987755555688899999
Q ss_pred HHHHH
Q 004149 765 WFKKY 769 (771)
Q Consensus 765 wl~~~ 769 (771)
||++.
T Consensus 241 Fl~~~ 245 (247)
T 1tqh_A 241 FLESL 245 (247)
T ss_dssp HHHHS
T ss_pred HHHhc
Confidence 99863
No 113
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.77 E-value=2.5e-18 Score=195.63 Aligned_cols=233 Identities=16% Similarity=0.105 Sum_probs=160.8
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecC-CcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004149 100 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
.+...++||||++|||++..+ +..++|.+ ++++.++++... ..+ ..+.|||| +|+|.+....
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~-g~~~lw~~-~~g~~~~lt~~~~~~~----------~~~~~spd--~~l~~~~~~~--- 85 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSE-GSVNAYLY-DGGETVKLNREPINSV----------LDPHYGVG--RVILVRDVSK--- 85 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEET-TEEEEEEE-ETTEEEECCSSCCSEE----------CEECTTCS--EEEEEEECST---
T ss_pred chheeecCCCCCeEEEEEccC-CceeEEEE-cCCCcEeeeccccccc----------ccccCCCC--eEEEEeccCC---
Confidence 377899999999999998754 55567765 566666665443 122 58999999 6888765311
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEc--cCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004149 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI--NSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~--~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
+.....||.+++ .++.. .+ +... .....+|||||+.
T Consensus 86 -----------------------------------g~~~~~l~~~~~~~~g~~~-~l--~~~~-~~~~~~~s~dg~~--- 123 (582)
T 3o4h_A 86 -----------------------------------GAEQHALFKVNTSRPGEEQ-RL--EAVK-PMRILSGVDTGEA--- 123 (582)
T ss_dssp -----------------------------------TSCCEEEEEEETTSTTCCE-EC--TTSC-SBEEEEEEECSSC---
T ss_pred -----------------------------------CCcceEEEEEeccCCCccc-cc--cCCC-CceeeeeCCCCCe---
Confidence 012357999998 65554 55 2222 2346799999999
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEec
Q 004149 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~ 336 (771)
++|++...+ .++++|+ ++++.++++.... .+++|||||++|+|.+.
T Consensus 124 -~~~~s~~~~--------------~~~l~d~-----------------~~g~~~~l~~~~~--~~~~~spDG~~la~~~~ 169 (582)
T 3o4h_A 124 -VVFTGATED--------------RVALYAL-----------------DGGGLRELARLPG--FGFVSDIRGDLIAGLGF 169 (582)
T ss_dssp -EEEEEECSS--------------CEEEEEE-----------------ETTEEEEEEEESS--CEEEEEEETTEEEEEEE
T ss_pred -EEEEecCCC--------------CceEEEc-----------------cCCcEEEeecCCC--ceEEECCCCCEEEEEEE
Confidence 999873221 3446687 6778888876544 78999999999999987
Q ss_pred CCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 004149 337 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 416 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~ 416 (771)
+. .....||++|+.+++.+.++.... ....++|||||+.|+ .+..++...||
T Consensus 170 ~~-------~~~~~i~~~d~~~g~~~~l~~~~~--------------------~~~~~~~SpDG~~l~-~~~~~~~~~i~ 221 (582)
T 3o4h_A 170 FG-------GGRVSLFTSNLSSGGLRVFDSGEG--------------------SFSSASISPGMKVTA-GLETAREARLV 221 (582)
T ss_dssp EE-------TTEEEEEEEETTTCCCEEECCSSC--------------------EEEEEEECTTSCEEE-EEECSSCEEEE
T ss_pred cC-------CCCeEEEEEcCCCCCceEeecCCC--------------------ccccceECCCCCEEE-EccCCCeeEEE
Confidence 64 123569999999888765543321 124678999999887 55566667899
Q ss_pred EEECCCCcEEEecCCCCCceeeE--------EeecCCEEEEEEeCC
Q 004149 417 SVNVSSGELLRITPAESNFSWSL--------LTLDGDNIIAVSSSP 454 (771)
Q Consensus 417 ~~d~~tg~~~~l~~~~~~~~~~~--------~s~d~~~l~~~~s~~ 454 (771)
++|+++++.+.++.....+..+. |+||| .++++.+..
T Consensus 222 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~ 266 (582)
T 3o4h_A 222 TVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARRE 266 (582)
T ss_dssp EECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEET
T ss_pred EEcCCCCcEEEccCCCcChhhhhhccccceeEcCCC-cEEEEEEcC
Confidence 99999999883333333333345 99999 666666543
No 114
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=99.77 E-value=2.1e-18 Score=175.26 Aligned_cols=218 Identities=15% Similarity=0.211 Sum_probs=140.1
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004149 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
..|+||++||.+.+ ...|...+..|++ +|.|+++|+|| +|.+... ......++++.+.+..+.+.. +.
T Consensus 14 ~~~~vvllHG~~~~--~~~w~~~~~~L~~-~~~vi~~Dl~G---~G~S~~~----~~~~~~~~~~a~dl~~~l~~l--~~ 81 (268)
T 3v48_A 14 DAPVVVLISGLGGS--GSYWLPQLAVLEQ-EYQVVCYDQRG---TGNNPDT----LAEDYSIAQMAAELHQALVAA--GI 81 (268)
T ss_dssp TCCEEEEECCTTCC--GGGGHHHHHHHHT-TSEEEECCCTT---BTTBCCC----CCTTCCHHHHHHHHHHHHHHT--TC
T ss_pred CCCEEEEeCCCCcc--HHHHHHHHHHHhh-cCeEEEECCCC---CCCCCCC----ccccCCHHHHHHHHHHHHHHc--CC
Confidence 46889999997665 4578888888855 79999999999 5544211 111234666666666666552 34
Q ss_pred CeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhc-----------CCCCCcch-------hhhhccCCCC-
Q 004149 616 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-----------TTDIPDWC-------YVESYGSKGK- 676 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~-----------~~~~~~~~-------~~~~~~~~~~- 676 (771)
+++.|+||||||.+++.++.++|++++++|+.++......... ......+. +...+.....
T Consensus 82 ~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (268)
T 3v48_A 82 EHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAP 161 (268)
T ss_dssp CSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTTHH
T ss_pred CCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhhhcccc
Confidence 6899999999999999999999999999999887543210000 00000000 0000000000
Q ss_pred -------CcCCCCCChhh----HHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCC
Q 004149 677 -------DSFTESPSVED----LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPND 745 (771)
Q Consensus 677 -------~~~~~~~~~~~----~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~ 745 (771)
........... ...+...+....+.++++|+|+++|++|..+|++.++.+.+.+.. .++++++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~p~----~~~~~~~~~ 237 (268)
T 3v48_A 162 RLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPD----SQKMVMPYG 237 (268)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHHHCSS----EEEEEESSC
T ss_pred cchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHHhCCc----CeEEEeCCC
Confidence 00000000000 111122233345778999999999999999999988888877654 789999999
Q ss_pred CccCCCCCChHHHHHHHHHHHHHHh
Q 004149 746 VHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 746 ~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
||... .+....+.+.|.+||.+.+
T Consensus 238 GH~~~-~e~p~~~~~~i~~fl~~~~ 261 (268)
T 3v48_A 238 GHACN-VTDPETFNALLLNGLASLL 261 (268)
T ss_dssp CTTHH-HHCHHHHHHHHHHHHHHHH
T ss_pred Ccchh-hcCHHHHHHHHHHHHHHhc
Confidence 99765 4455688899999998754
No 115
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=99.77 E-value=1.1e-17 Score=173.03 Aligned_cols=231 Identities=13% Similarity=0.132 Sum_probs=139.6
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHH-HHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004149 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKS-LAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~-~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
.+|.++++..+-++ ..|.||++||.+.. ...|... +..|+++||.|+++|+||. |.+.... + ....
T Consensus 8 ~~g~~l~y~~~G~~------~~~~vvllHG~~~~--~~~w~~~~~~~L~~~G~~vi~~D~rG~---G~S~~~~-~-~~~~ 74 (298)
T 1q0r_A 8 SGDVELWSDDFGDP------ADPALLLVMGGNLS--ALGWPDEFARRLADGGLHVIRYDHRDT---GRSTTRD-F-AAHP 74 (298)
T ss_dssp ETTEEEEEEEESCT------TSCEEEEECCTTCC--GGGSCHHHHHHHHTTTCEEEEECCTTS---TTSCCCC-T-TTSC
T ss_pred cCCeEEEEEeccCC------CCCeEEEEcCCCCC--ccchHHHHHHHHHhCCCEEEeeCCCCC---CCCCCCC-C-CcCC
Confidence 35777776655432 24689999997655 3467664 4889999999999999994 4432100 0 0112
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCcc-ch-hhh------h------cCC
Q 004149 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC-NL-ALM------V------GTT 660 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~-~~-~~~------~------~~~ 660 (771)
..++++.+.+..+++. ++.+++.|+||||||.+++.++.++|++++++|+.++.. .. ... . ...
T Consensus 75 ~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (298)
T 1q0r_A 75 YGFGELAADAVAVLDG--WGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLP 152 (298)
T ss_dssp CCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSC
T ss_pred cCHHHHHHHHHHHHHH--hCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhcccc
Confidence 2345555444444444 245689999999999999999999999999999988754 21 000 0 000
Q ss_pred CCC-cc--hhhhhc-cCCC--------C---CcC--CCC-CChhhH-------------------HHHh---hcCcccc-
Q 004149 661 DIP-DW--CYVESY-GSKG--------K---DSF--TES-PSVEDL-------------------TRFH---SKSPISH- 699 (771)
Q Consensus 661 ~~~-~~--~~~~~~-~~~~--------~---~~~--~~~-~~~~~~-------------------~~~~---~~sp~~~- 699 (771)
... .. .+.... .... . ..+ ... ...+.. ..+. ..+....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (298)
T 1q0r_A 153 GPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAE 232 (298)
T ss_dssp CCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGG
T ss_pred cccHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchhhhhhhhhcCccccccc
Confidence 000 00 000000 0000 0 000 000 000000 0000 0011234
Q ss_pred ccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHh
Q 004149 700 ISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 700 ~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
+.++++|+|+++|++|..+|++.++.+.+.+. ..++++++++||. ...++.+.+.+||.+++
T Consensus 233 l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p----~~~~~~i~~~gHe-----~p~~~~~~i~~fl~~~~ 294 (298)
T 1q0r_A 233 LREVTVPTLVIQAEHDPIAPAPHGKHLAGLIP----TARLAEIPGMGHA-----LPSSVHGPLAEVILAHT 294 (298)
T ss_dssp GGGCCSCEEEEEETTCSSSCTTHHHHHHHTST----TEEEEEETTCCSS-----CCGGGHHHHHHHHHHHH
T ss_pred ccccCCCEEEEEeCCCccCCHHHHHHHHHhCC----CCEEEEcCCCCCC-----CcHHHHHHHHHHHHHHh
Confidence 67889999999999999999988887776654 3799999999992 22467889999998764
No 116
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.77 E-value=6e-18 Score=195.80 Aligned_cols=272 Identities=14% Similarity=0.114 Sum_probs=175.8
Q ss_pred ccceEEEeCCCCCeEEEEecC--CCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeec--CCCCe-EEEEecC
Q 004149 99 TGASAVVPSPSGSKLLVVRNP--ENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWN--SDETL-IAYVAEE 173 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wS--pDg~~-la~~~~~ 173 (771)
..+..|+|||| .++|++.+ .++...+|.+..++..++++.....+...+...+ -..+.|| |||++ |+|.+..
T Consensus 24 ~~~~~~~~s~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~SPDg~~~la~~~~~ 100 (662)
T 3azo_A 24 GRPACVGAVGD--EVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYS-GFPWAGVPRPAGGPLLVFTHFG 100 (662)
T ss_dssp SCCEEEEEETT--EEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTC-CCCEEEECCSSSSCEEEEEBTT
T ss_pred CccceeEEcCC--eEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccC-CccceeeeecCCCeEEEEEECC
Confidence 45788999965 68888763 3344456655445555555443322211111100 0144565 99999 9997432
Q ss_pred CCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEcc--C-CceeeccCCC---CCCccceEEE
Q 004149 174 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ--S-GEVQAVKGIP---KSLSVGQVVW 247 (771)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~--~-~~~~~l~~~~---~~~~~~~~~w 247 (771)
...||++++. + ++.+.++..+ .......++|
T Consensus 101 -------------------------------------------~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 137 (662)
T 3azo_A 101 -------------------------------------------DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVL 137 (662)
T ss_dssp -------------------------------------------TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEE
T ss_pred -------------------------------------------CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEE
Confidence 2579999998 5 8888884221 3446778999
Q ss_pred ecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCC------CcceecC-CCCcccc
Q 004149 248 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED------LPVVNLT-ESISSAF 320 (771)
Q Consensus 248 spDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~------~~~~~lt-~~~~~~~ 320 (771)
||||+. |+|++....... ......+||++|+ ++ ++.++|+ .+...+.
T Consensus 138 spDg~~----l~~~~~~~~~~~-----~~~~~~~i~~~~~-----------------~~~~~~~~~~~~~l~~~~~~~~~ 191 (662)
T 3azo_A 138 LPERGE----VWCMAEEFTGEG-----PSDVRRFLAAVPL-----------------DGSAAADRSAVRELSDDAHRFVT 191 (662)
T ss_dssp ETTTTE----EEEEEEEECSSS-----TTCEEEEEEEEET-----------------TSTTTTCGGGSEESSCSCSSEEC
T ss_pred CCCCCE----EEEEEecccCCC-----CCCceeEEEEEEC-----------------CCCccccCCceeEEEecCCCccc
Confidence 999999 999885321000 0012248999998 66 7788888 7677788
Q ss_pred ceeecCCCCEEEEEecCCCCCCCCccccccceeeecC-CC---CCCCCccceeeEEecccccCCCCCcccccCCCCCCcc
Q 004149 321 FPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP-TN---GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPW 396 (771)
Q Consensus 321 ~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~-~~---~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~ 396 (771)
.|+|||||++|+|.+.+.. +......+|+++|+. ++ +.++++... ......+.|
T Consensus 192 ~~~~SpDG~~la~~~~~~~---~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~-------------------~~~~~~~~~ 249 (662)
T 3azo_A 192 GPRLSPDGRQAVWLAWDHP---RMPWEGTELKTARVTEDGRFADTRTLLGGP-------------------EEAIAQAEW 249 (662)
T ss_dssp CCEECTTSSEEEEEEECTT---CCTTTCEEEEEEEECTTSCEEEEEEEEEET-------------------TBCEEEEEE
T ss_pred CceECCCCCEEEEEECCCC---CCCCCCcEEEEEEECCCCcccccEEeCCCC-------------------CceEcceEE
Confidence 9999999999999987642 111234679999998 45 222222110 012346789
Q ss_pred ccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCc---------eeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004149 397 LSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNF---------SWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 397 s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~---------~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~ 467 (771)
||||+ |+|+++.++..+||.+++++++.++++...... ....++++++ ++++.+. .-.+|+++++.+
T Consensus 250 spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~~--~~~~l~~~d~~~ 325 (662)
T 3azo_A 250 APDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGL-IAVVHGK--GAAVLGILDPES 325 (662)
T ss_dssp CTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSC-EEEEEBS--SSCEEEEEETTT
T ss_pred CCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCE-EEEEEEc--CccEEEEEECCC
Confidence 99999 888887777779999999999999888654322 2234555555 5666655 556788887654
Q ss_pred c
Q 004149 468 K 468 (771)
Q Consensus 468 ~ 468 (771)
+
T Consensus 326 ~ 326 (662)
T 3azo_A 326 G 326 (662)
T ss_dssp T
T ss_pred C
Confidence 3
No 117
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.77 E-value=4.5e-17 Score=167.23 Aligned_cols=249 Identities=14% Similarity=0.154 Sum_probs=167.6
Q ss_pred EEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCC
Q 004149 45 TFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESP 124 (771)
Q Consensus 45 ~~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~ 124 (771)
.....+|||++|++.. ...++++++... ++..++.... ....+..++|||||++|++.....++..
T Consensus 45 ~~~~~spdg~~l~~~~----------~~~i~~~d~~~~-~~~~~~~~~~---~~~~~~~~~~spdg~~l~~~~~~~~~~~ 110 (297)
T 2ojh_A 45 EAPNWSPDGKYLLLNS----------EGLLYRLSLAGD-PSPEKVDTGF---ATICNNDHGISPDGALYAISDKVEFGKS 110 (297)
T ss_dssp EEEEECTTSSEEEEEE----------TTEEEEEESSSC-CSCEECCCTT---CCCBCSCCEECTTSSEEEEEECTTTSSC
T ss_pred EeeEECCCCCEEEEEc----------CCeEEEEeCCCC-CCceEecccc---ccccccceEECCCCCEEEEEEeCCCCcc
Confidence 3445688999999863 136788777441 2344333221 1134567999999999999886554667
Q ss_pred eEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCccc
Q 004149 125 IQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGD 203 (771)
Q Consensus 125 ~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (771)
.+|.+. .++....+... ... ..+.|||||++|+|.+...
T Consensus 111 ~l~~~~~~~~~~~~~~~~-~~~----------~~~~~spdg~~l~~~~~~~----------------------------- 150 (297)
T 2ojh_A 111 AIYLLPSTGGTPRLMTKN-LPS----------YWHGWSPDGKSFTYCGIRD----------------------------- 150 (297)
T ss_dssp EEEEEETTCCCCEECCSS-SSE----------EEEEECTTSSEEEEEEEET-----------------------------
T ss_pred eEEEEECCCCceEEeecC-CCc----------cceEECCCCCEEEEEECCC-----------------------------
Confidence 888887 44443333222 112 4789999999999875432
Q ss_pred ccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeE
Q 004149 204 WEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 283 (771)
Q Consensus 204 ~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~ 283 (771)
....||.+++.+++.+.+ ......+..+.|+|||+. |++.+.. +....||
T Consensus 151 ------------~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~s~dg~~----l~~~~~~------------~~~~~i~ 200 (297)
T 2ojh_A 151 ------------QVFDIYSMDIDSGVETRL--THGEGRNDGPDYSPDGRW----IYFNSSR------------TGQMQIW 200 (297)
T ss_dssp ------------TEEEEEEEETTTCCEEEC--CCSSSCEEEEEECTTSSE----EEEEECT------------TSSCEEE
T ss_pred ------------CceEEEEEECCCCcceEc--ccCCCccccceECCCCCE----EEEEecC------------CCCccEE
Confidence 225788888888888888 555556788999999998 8887632 2334789
Q ss_pred EEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCC
Q 004149 284 AVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS 363 (771)
Q Consensus 284 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~ 363 (771)
.+++ .++..+.++.....+..+.|||||++|++.+.+.............|+++|+.+++.+.
T Consensus 201 ~~~~-----------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~ 263 (297)
T 2ojh_A 201 RVRV-----------------DGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVET 263 (297)
T ss_dssp EEET-----------------TSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEE
T ss_pred EECC-----------------CCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCcee
Confidence 9987 66777888877777889999999999999987642100000134679999998876533
Q ss_pred CccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCC
Q 004149 364 SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 411 (771)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~ 411 (771)
+.... . ....+..++|+|||+.|++.+...+
T Consensus 264 ~~~~~-------~----------~~~~~~~~~~spdg~~l~~~~~~~~ 294 (297)
T 2ojh_A 264 LFDLF-------G----------GQGTMNSPNWSPDGDEFAYVRYFPV 294 (297)
T ss_dssp EEEEE-------E----------STTTSCSCCBCTTSSEEEEEEECCC
T ss_pred eeccC-------C----------CCcccccceECCCCCEEEEEEeccC
Confidence 32110 0 0113567899999999988876543
No 118
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=99.77 E-value=5.8e-18 Score=172.97 Aligned_cols=213 Identities=18% Similarity=0.280 Sum_probs=131.6
Q ss_pred cEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCe
Q 004149 538 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 617 (771)
Q Consensus 538 p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 617 (771)
|.||++||.+.+ ...|...+..|+++||.|+++|+|| +|.+.... .....+++.+.+..+++. ++.++
T Consensus 24 ~pvvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G---~G~S~~~~-----~~~~~~~~a~dl~~~l~~--l~~~~ 91 (277)
T 1brt_A 24 QPVVLIHGFPLS--GHSWERQSAALLDAGYRVITYDRRG---FGQSSQPT-----TGYDYDTFAADLNTVLET--LDLQD 91 (277)
T ss_dssp SEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTT---STTSCCCS-----SCCSHHHHHHHHHHHHHH--HTCCS
T ss_pred CeEEEECCCCCc--HHHHHHHHHHHhhCCCEEEEeCCCC---CCCCCCCC-----CCccHHHHHHHHHHHHHH--hCCCc
Confidence 459999997765 4578888999999999999999999 44442111 112334443333333332 13468
Q ss_pred EEEEEcChhHHHHHHHHHhCCC-ceeEEEecCCccchhhhh-cCCC--CC-cc-------------hhhhhccCCCCCc-
Q 004149 618 VTVVGGSHGGFLTTHLIGQAPD-KFVAAAARNPLCNLALMV-GTTD--IP-DW-------------CYVESYGSKGKDS- 678 (771)
Q Consensus 618 i~l~G~S~GG~~a~~~a~~~p~-~~~a~v~~~p~~~~~~~~-~~~~--~~-~~-------------~~~~~~~~~~~~~- 678 (771)
+.|+||||||.+++.++.++|+ +++++|+.++........ .... .+ .. .....+.......
T Consensus 92 ~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (277)
T 1brt_A 92 AVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLD 171 (277)
T ss_dssp EEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTHH
T ss_pred eEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcCchhhHHHHHHHHhhcc
Confidence 9999999999999999999998 999999998743211000 0000 00 00 0000000000000
Q ss_pred --CCCCCChhhHHHH----------------h--hcCccccccCCCCcEEEEeeCCCCccCcHHH-HHHHHHHHhCCCCE
Q 004149 679 --FTESPSVEDLTRF----------------H--SKSPISHISKVKTPTIFLLGAQDLRVPVSNG-LQYARALREKGVET 737 (771)
Q Consensus 679 --~~~~~~~~~~~~~----------------~--~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~-~~~~~~l~~~g~~~ 737 (771)
.......+....+ . ..+....+.++++|+|+++|++|..+|++.+ +.+.+.+.. .
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~----~ 247 (277)
T 1brt_A 172 ENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPS----A 247 (277)
T ss_dssp HHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCTT----S
T ss_pred ccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcccCCCCeEEEecCCCccCChHHHHHHHHHHCCC----C
Confidence 0000011111100 0 1122335678899999999999999999887 777766643 6
Q ss_pred EEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004149 738 KVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 738 ~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 767 (771)
++++++++||.... +...++.+.+.+||+
T Consensus 248 ~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~ 276 (277)
T 1brt_A 248 EYVEVEGAPHGLLW-THAEEVNTALLAFLA 276 (277)
T ss_dssp EEEEETTCCTTHHH-HTHHHHHHHHHHHHH
T ss_pred cEEEeCCCCcchhh-hCHHHHHHHHHHHHh
Confidence 89999999998653 345678888999986
No 119
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=99.77 E-value=1.7e-17 Score=176.93 Aligned_cols=247 Identities=12% Similarity=0.142 Sum_probs=152.5
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCC-----------cchHHHH---HHHHCCcEEEEECCCC--CCCC
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-----------SYSKSLA---FLSSVGYSLLIVNYRG--SLGF 580 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~-----------~~~~~~~---~la~~G~~V~~~d~rG--~~~~ 580 (771)
+|..+++..+.+. ...+.|+||++||.+...... .|...+. .|.+.||.|+++|+|| .+..
T Consensus 29 ~g~~l~y~~~g~~---~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s 105 (366)
T 2pl5_A 29 SPVVIAYETYGTL---SSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSS 105 (366)
T ss_dssp SSEEEEEEEEECC---CTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSS
T ss_pred cCceeeEEeccCc---CCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCC
Confidence 4667776666554 223458999999977654310 3444442 3557899999999999 3433
Q ss_pred ChhhhhcCC-CC----ccccchhhHHHHHHHHHHcCCCCCCeE-EEEEcChhHHHHHHHHHhCCCceeEEEecCCccchh
Q 004149 581 GEEALQSLP-GK----VGSQDVNDVLTAIDHVIDMGLANPSKV-TVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA 654 (771)
Q Consensus 581 g~~~~~~~~-~~----~~~~~~~D~~~~i~~l~~~~~~d~~ri-~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~ 654 (771)
+........ .. .....++++.+.+..+++. ++.+++ .|+||||||.+++.++.++|++++++|+.+|.....
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 183 (366)
T 2pl5_A 106 GPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVES--LGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHS 183 (366)
T ss_dssp STTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHH--TTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCC
T ss_pred CCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHH--cCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCC
Confidence 221100000 00 0123566777666666665 345788 799999999999999999999999999999875431
Q ss_pred hhh---------cCCCCCcc-----------------------------hhhhhccCCC-----------CCc-------
Q 004149 655 LMV---------GTTDIPDW-----------------------------CYVESYGSKG-----------KDS------- 678 (771)
Q Consensus 655 ~~~---------~~~~~~~~-----------------------------~~~~~~~~~~-----------~~~------- 678 (771)
... .....+.| .+...+.... ...
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (366)
T 2pl5_A 184 AMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGE 263 (366)
T ss_dssp HHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTC
T ss_pred CccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHHHH
Confidence 100 00000000 0000000000 000
Q ss_pred -CCCCCChhhH----HHHhhcC------ccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEe-CCCC
Q 004149 679 -FTESPSVEDL----TRFHSKS------PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF-PNDV 746 (771)
Q Consensus 679 -~~~~~~~~~~----~~~~~~s------p~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~-~~~~ 746 (771)
+......... ..+...+ ....+.++++|+|+++|++|.++|++.++.+++.+...+.+++++++ +++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 343 (366)
T 2pl5_A 264 SFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSGEG 343 (366)
T ss_dssp CSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCCBS
T ss_pred hhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccCeEEEEeCCCCC
Confidence 0000011111 1111111 12257889999999999999999999999999999976666899999 8999
Q ss_pred ccCCCCCChHHHHHHHHHHHHHH
Q 004149 747 HGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 747 H~~~~~~~~~~~~~~i~~wl~~~ 769 (771)
|.+.... ..++.+.+.+||+++
T Consensus 344 H~~~~e~-p~~~~~~i~~fl~~~ 365 (366)
T 2pl5_A 344 HDSFLLK-NPKQIEILKGFLENP 365 (366)
T ss_dssp SGGGGSC-CHHHHHHHHHHHHCC
T ss_pred cchhhcC-hhHHHHHHHHHHccC
Confidence 9877544 458889999999764
No 120
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.77 E-value=1.5e-17 Score=202.13 Aligned_cols=326 Identities=9% Similarity=0.035 Sum_probs=200.5
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCC--CCC
Q 004149 46 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPE--NES 123 (771)
Q Consensus 46 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~--~~~ 123 (771)
.|..| |++|+|... ..||++++ .+++.++|+..+ ..+..++|||||++|||.+... ++.
T Consensus 19 ~~~~S--~~~iaf~~~----------~~l~~~~~--~gg~~~~lt~~~-----~~v~~~~~SPDG~~la~~s~~~~~~~~ 79 (1045)
T 1k32_A 19 NPDIH--GDRIIFVCC----------DDLWEHDL--KSGSTRKIVSNL-----GVINNARFFPDGRKIAIRVMRGSSLNT 79 (1045)
T ss_dssp EEEEE--TTEEEEEET----------TEEEEEET--TTCCEEEEECSS-----SEEEEEEECTTSSEEEEEEEESTTCCE
T ss_pred CcEEe--CCEEEEEEC----------CcEEEEEC--CCCcEEEeeeCC-----CcccCeEECCCCCEEEEEEeeccCCCC
Confidence 34444 358999863 37888776 445677887654 5688999999999999998762 244
Q ss_pred CeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC---CCc--cCCCCC-----CCCCC
Q 004149 124 PIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK---PTF--SLGSTK-----GGSSD 192 (771)
Q Consensus 124 ~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~---~~~--~~~~~~-----~~~~~ 192 (771)
.++++++ .++..++++.......+.. .....++|||||+ |+|.+....... ..| ...... .....
T Consensus 80 ~~i~~~d~~~g~~~~lt~~~~~~~~~~---~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~ 155 (1045)
T 1k32_A 80 ADLYFYNGENGEIKRITYFSGKSTGRR---MFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPAT 155 (1045)
T ss_dssp EEEEEEETTTTEEEECCCCCEEEETTE---ECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCS
T ss_pred CeEEEEECCCCCeEEcccCCCcccccc---cccccccCCCCCE-EEEEECCcCCCcccceEEEEECCCCCeEEecCCCcc
Confidence 5677777 5555554443222110000 0014789999998 777765321100 000 000000 00000
Q ss_pred ---------------ccCCCC-----------------------------------------------------------
Q 004149 193 ---------------KDCNSW----------------------------------------------------------- 198 (771)
Q Consensus 193 ---------------~~~~~~----------------------------------------------------------- 198 (771)
.....|
T Consensus 156 ~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g 235 (1045)
T 1k32_A 156 HILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDG 235 (1045)
T ss_dssp EEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTS
T ss_pred eeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCC
Confidence 000000
Q ss_pred -----------CCcccccCCcCcccCCccCceEEEEEccCCceeeccCCC---------CCCccceEEEe-cCCCCCccE
Q 004149 199 -----------KGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIP---------KSLSVGQVVWA-PLNEGLHQY 257 (771)
Q Consensus 199 -----------~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~---------~~~~~~~~~ws-pDg~~~~~~ 257 (771)
.....|++|. ..++......|++||+.++++..+.+.. ....+..++|| |||+.
T Consensus 236 ~~~~~l~~~~~~~~~~~SpDG-~~la~~~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~---- 310 (1045)
T 1k32_A 236 KDLRKHTSFTDYYPRHLNTDG-RRILFSKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDL---- 310 (1045)
T ss_dssp CSCEECCCCCSSCEEEEEESS-SCEEEEETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGC----
T ss_pred CcceEecCCCCcceeeEcCCC-CEEEEEeCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCE----
Confidence 0011233332 2122223456677776555555442100 01146789999 99999
Q ss_pred EEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCc-cccceeecCCCCEEEEEec
Q 004149 258 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS-SAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 258 l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~-~~~~p~~SpDG~~l~f~~~ 336 (771)
|+|.+ ...|+.+++ .+++.++++.+.. .+..+.|| ||+.|+|.+.
T Consensus 311 la~~~----------------~~~i~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~ 356 (1045)
T 1k32_A 311 IAFVS----------------RGQAFIQDV-----------------SGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR 356 (1045)
T ss_dssp EEEEE----------------TTEEEEECT-----------------TSSBEEECSCCSCEEEEEECSS-SEEEEEEEET
T ss_pred EEEEE----------------cCEEEEEcC-----------------CCCceEEccCCCcceEEeeeEc-CCCeEEEEEC
Confidence 99986 127999998 6777777877777 78899999 9999999886
Q ss_pred CCCCCCCCccccccce-eeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 004149 337 KSSVDSGAHSATDSLH-RIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 415 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l 415 (771)
+ .+|| ++++.++..+.++... ..+..++|||||+.|++... ...|
T Consensus 357 ~-----------~~l~~~~d~~~~~~~~l~~~~--------------------~~~~~~~~SpDG~~la~~~~---~~~v 402 (1045)
T 1k32_A 357 E-----------GDFLGIYDYRTGKAEKFEENL--------------------GNVFAMGVDRNGKFAVVAND---RFEI 402 (1045)
T ss_dssp T-----------EEEEEEEETTTCCEEECCCCC--------------------CSEEEEEECTTSSEEEEEET---TSEE
T ss_pred C-----------CceEEEEECCCCCceEecCCc--------------------cceeeeEECCCCCEEEEECC---CCeE
Confidence 2 3689 9998876654433110 12346789999998887653 2378
Q ss_pred EEEECCCCcEEEecC-CCCCceeeEEeecCCEEEEEEeCC------CCCCeEEEEEecc
Q 004149 416 ISVNVSSGELLRITP-AESNFSWSLLTLDGDNIIAVSSSP------VDVPQVKYGYFVD 467 (771)
Q Consensus 416 ~~~d~~tg~~~~l~~-~~~~~~~~~~s~d~~~l~~~~s~~------~~p~~l~~~~~~~ 467 (771)
+.+|+.+|+.+.+.. ....+....|||||++|++..... ..+..|++.++.+
T Consensus 403 ~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 403 MTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred EEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 899999999988873 333446678999999998887654 4456788887654
No 121
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=99.76 E-value=9.3e-18 Score=171.84 Aligned_cols=226 Identities=20% Similarity=0.265 Sum_probs=135.9
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
+.+|..+++... + ..|.||++||.+.+ ...|...+..|+++||.|+++|+|| +|.+.. + ...
T Consensus 13 ~~~g~~l~y~~~------G--~g~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G---~G~S~~---~--~~~ 74 (281)
T 3fob_A 13 NQAPIEIYYEDH------G--TGKPVVLIHGWPLS--GRSWEYQVPALVEAGYRVITYDRRG---FGKSSQ---P--WEG 74 (281)
T ss_dssp TTEEEEEEEEEE------S--SSEEEEEECCTTCC--GGGGTTTHHHHHHTTEEEEEECCTT---STTSCC---C--SSC
T ss_pred CCCceEEEEEEC------C--CCCeEEEECCCCCc--HHHHHHHHHHHHhCCCEEEEeCCCC---CCCCCC---C--ccc
Confidence 445666654432 1 23678999997765 4467778888999999999999999 444421 1 112
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHh-CCCceeEEEecCCccchhhhh-cC-CCCCc-c-----
Q 004149 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPLCNLALMV-GT-TDIPD-W----- 665 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~-~p~~~~a~v~~~p~~~~~~~~-~~-~~~~~-~----- 665 (771)
...+++.+.+..+++. ++.+++.|+||||||.+++.+++. +|++++++|+.++........ .. ..... .
T Consensus 75 ~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (281)
T 3fob_A 75 YEYDTFTSDLHQLLEQ--LELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETF 152 (281)
T ss_dssp CSHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHH--cCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHH
Confidence 3345555555555554 245689999999999987776655 589999999887642110000 00 00000 0
Q ss_pred ---------hhh----hhccCCCCCcCCCCCChhh-------------------HHHHhhcCccccccCCCCcEEEEeeC
Q 004149 666 ---------CYV----ESYGSKGKDSFTESPSVED-------------------LTRFHSKSPISHISKVKTPTIFLLGA 713 (771)
Q Consensus 666 ---------~~~----~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~sp~~~~~~i~~P~Lii~G~ 713 (771)
.+. ..+..... ......... ...+...+....+.++++|+|+++|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~ 230 (281)
T 3fob_A 153 KSGVINDRLAFLDEFTKGFFAAGD--RTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGD 230 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCBTT--BCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEET
T ss_pred HHHhhhhHHHHHHHHHHHhccccc--ccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCCEEEEecC
Confidence 000 00000000 000000000 01111223334578899999999999
Q ss_pred CCCccCcHHH-HHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004149 714 QDLRVPVSNG-LQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 714 ~D~~vp~~~~-~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 767 (771)
+|.++|++.+ +.+.+.+. +.++++++++||.+. .+...++.+.+.+||+
T Consensus 231 ~D~~~p~~~~~~~~~~~~p----~~~~~~i~~~gH~~~-~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 231 SDATVPFEYSGKLTHEAIP----NSKVALIKGGPHGLN-ATHAKEFNEALLLFLK 280 (281)
T ss_dssp TCSSSCGGGTHHHHHHHST----TCEEEEETTCCTTHH-HHTHHHHHHHHHHHHC
T ss_pred CCCCcCHHHHHHHHHHhCC----CceEEEeCCCCCchh-hhhHHHHHHHHHHHhh
Confidence 9999999876 44434443 479999999999865 3445578888888875
No 122
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=99.76 E-value=2.2e-17 Score=168.49 Aligned_cols=230 Identities=16% Similarity=0.188 Sum_probs=136.7
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
..+|..+++..+.|+ ..|+||++||.+.+ ...|...+..|+++||.|+++|+||. |.+... ...
T Consensus 6 ~~~g~~l~y~~~g~~------~~~~vvllHG~~~~--~~~w~~~~~~L~~~g~~vi~~D~~G~---G~S~~~-----~~~ 69 (276)
T 1zoi_A 6 TKDGVQIFYKDWGPR------DAPVIHFHHGWPLS--ADDWDAQLLFFLAHGYRVVAHDRRGH---GRSSQV-----WDG 69 (276)
T ss_dssp CTTSCEEEEEEESCT------TSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTS---TTSCCC-----SSC
T ss_pred CCCCcEEEEEecCCC------CCCeEEEECCCCcc--hhHHHHHHHHHHhCCCEEEEecCCCC---CCCCCC-----CCC
Confidence 345777776655432 23689999997655 45788888999999999999999994 444211 111
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhC-CCceeEEEecCCccchhhhhcCC--CCCcch-----
Q 004149 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGTT--DIPDWC----- 666 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~p~~~~~~~~~~~--~~~~~~----- 666 (771)
..++++.+.+..+++. ++.+++.|+||||||.+++.++.++ |++++++|+.++........... ..+...
T Consensus 70 ~~~~~~~~d~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (276)
T 1zoi_A 70 HDMDHYADDVAAVVAH--LGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQ 147 (276)
T ss_dssp CSHHHHHHHHHHHHHH--HTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH--hCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHHHHH
Confidence 2334433333333332 1346799999999999999988777 99999999988643210000000 000000
Q ss_pred ---------hhhhccC-CCC--CcCCCCCChhhHHH-------------------HhhcCccccccCCCCcEEEEeeCCC
Q 004149 667 ---------YVESYGS-KGK--DSFTESPSVEDLTR-------------------FHSKSPISHISKVKTPTIFLLGAQD 715 (771)
Q Consensus 667 ---------~~~~~~~-~~~--~~~~~~~~~~~~~~-------------------~~~~sp~~~~~~i~~P~Lii~G~~D 715 (771)
+...+.. ... .............. +...+....+.++++|+|+++|++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D 227 (276)
T 1zoi_A 148 AQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDD 227 (276)
T ss_dssp HHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHHHCCSCEEEEEETTC
T ss_pred HHHHHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhhccccCCCEEEEEcCCC
Confidence 0000000 000 00000001111110 1111222346678999999999999
Q ss_pred CccCcHHHHH-HHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004149 716 LRVPVSNGLQ-YARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 716 ~~vp~~~~~~-~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 767 (771)
..+|++...+ +.+.+. +.++++++++||.+.. +...++.+.+.+||+
T Consensus 228 ~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 228 QIVPYENSGVLSAKLLP----NGALKTYKGYPHGMPT-THADVINADLLAFIR 275 (276)
T ss_dssp SSSCSTTTHHHHHHHST----TEEEEEETTCCTTHHH-HTHHHHHHHHHHHHT
T ss_pred cccChHHHHHHHHhhCC----CceEEEcCCCCCchhh-hCHHHHHHHHHHHhc
Confidence 9999874443 333332 4899999999998753 455678888988885
No 123
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.76 E-value=5.7e-18 Score=175.26 Aligned_cols=234 Identities=14% Similarity=0.120 Sum_probs=149.4
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHH---HHHHHHCCcEEEEECCCCCCCCChhhhhc-CCCCcc
Q 004149 518 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKS---LAFLSSVGYSLLIVNYRGSLGFGEEALQS-LPGKVG 593 (771)
Q Consensus 518 g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~---~~~la~~G~~V~~~d~rG~~~~g~~~~~~-~~~~~~ 593 (771)
+.++.++ +.|. .++.|+||++||++.......|... .+.+++.||.|+++|++++..+....... ..+...
T Consensus 20 ~~~i~v~-~~p~----~~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~~~~~~~~~g~~~ 94 (304)
T 1sfr_A 20 GRDIKVQ-FQSG----GANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQ 94 (304)
T ss_dssp TEEEEEE-EECC----STTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEE
T ss_pred CCceEEE-ECCC----CCCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCccccccCCccccccccc
Confidence 4566666 4443 1678999999997532223345442 35677889999999998754332110000 000000
Q ss_pred ccchhhH--HHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCC-------CCCc
Q 004149 594 SQDVNDV--LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT-------DIPD 664 (771)
Q Consensus 594 ~~~~~D~--~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~-------~~~~ 664 (771)
....+++ .+.+.++.++..+++++++|+|+||||++|+.++.++|++|+++++.+|..+........ ....
T Consensus 95 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~~~~~~~~~ 174 (304)
T 1sfr_A 95 TYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAMGPTLIGLAMGDAGG 174 (304)
T ss_dssp CCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTSTTHHHHHHHHHHHTTS
T ss_pred cccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCccccchhhhhhHhhhhccc
Confidence 1223332 234444444334677899999999999999999999999999999999987543210000 0000
Q ss_pred chhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCC---CCcEEEEeeCCCC--------------ccCcHHHHHHH
Q 004149 665 WCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV---KTPTIFLLGAQDL--------------RVPVSNGLQYA 727 (771)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i---~~P~Lii~G~~D~--------------~vp~~~~~~~~ 727 (771)
+.....++. + ....+...+|...+.++ ++|++|++|+.|+ .++..++++++
T Consensus 175 ~~~~~~~g~---------~---~~~~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~~~~ 242 (304)
T 1sfr_A 175 YKASDMWGP---------K---EDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVRTSNIKFQ 242 (304)
T ss_dssp CCHHHHHCS---------T---TSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHHHHHHHHHH
T ss_pred cchHHhcCC---------c---chhhhHhcCHHHHHHHhhhcCCeEEEEecCCCCccccccccccchhHHHHHHHHHHHH
Confidence 000001111 1 11345566676655544 5899999999998 67889999999
Q ss_pred HHHHhCC-CCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 728 RALREKG-VETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 728 ~~l~~~g-~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
+.|++.| +++++.+|++++|.+. .....+..++.||.++|+
T Consensus 243 ~~L~~~G~~~v~~~~~~~g~H~~~---~w~~~l~~~l~~l~~~l~ 284 (304)
T 1sfr_A 243 DAYNAGGGHNGVFDFPDSGTHSWE---YWGAQLNAMKPDLQRALG 284 (304)
T ss_dssp HHHHHTTCCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHHHT
T ss_pred HHHHhCCCCceEEEecCCCccCHH---HHHHHHHHHHHHHHHhcC
Confidence 9999999 9999999977799752 234556778889988764
No 124
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=99.76 E-value=4.1e-17 Score=166.31 Aligned_cols=231 Identities=15% Similarity=0.191 Sum_probs=137.1
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
..+|..+++..+.|+ +.|+||++||.+.+ ...|...+..|+++||.|+++|+||. |.+... ...
T Consensus 5 ~~~g~~l~y~~~g~~------~~~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G~---G~S~~~-----~~~ 68 (275)
T 1a88_A 5 TSDGTNIFYKDWGPR------DGLPVVFHHGWPLS--ADDWDNQMLFFLSHGYRVIAHDRRGH---GRSDQP-----STG 68 (275)
T ss_dssp CTTSCEEEEEEESCT------TSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTS---TTSCCC-----SSC
T ss_pred ccCCCEEEEEEcCCC------CCceEEEECCCCCc--hhhHHHHHHHHHHCCceEEEEcCCcC---CCCCCC-----CCC
Confidence 345777776655432 23689999997655 45788888999999999999999994 444211 111
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhC-CCceeEEEecCCccchhhhhc--CCCCCcch-----
Q 004149 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVG--TTDIPDWC----- 666 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~p~~~~~~~~~--~~~~~~~~----- 666 (771)
..++++.+.+..+++. ++.+++.|+||||||.+++.++.++ |++++++|+.++......... ....+...
T Consensus 69 ~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (275)
T 1a88_A 69 HDMDTYAADVAALTEA--LDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFR 146 (275)
T ss_dssp CSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH--cCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHHHHH
Confidence 2344444333333333 1346899999999999999877776 999999999886432100000 00000000
Q ss_pred ---------hhhhccC-C--CCCcCCCCCChhhHHH-------------------HhhcCccccccCCCCcEEEEeeCCC
Q 004149 667 ---------YVESYGS-K--GKDSFTESPSVEDLTR-------------------FHSKSPISHISKVKTPTIFLLGAQD 715 (771)
Q Consensus 667 ---------~~~~~~~-~--~~~~~~~~~~~~~~~~-------------------~~~~sp~~~~~~i~~P~Lii~G~~D 715 (771)
+...+.. . ................ +...+....+.++++|+|+++|++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 226 (275)
T 1a88_A 147 AALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDD 226 (275)
T ss_dssp HHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTC
T ss_pred HHHhhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccccccCCCCEEEEecCCC
Confidence 0000000 0 0000000011111110 1111222345678999999999999
Q ss_pred CccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004149 716 LRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 716 ~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 767 (771)
..+|++...+.+..+ ..++++++++++||.+.. +...++.+.+.+||+
T Consensus 227 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~ 274 (275)
T 1a88_A 227 QVVPYADAAPKSAEL---LANATLKSYEGLPHGMLS-THPEVLNPDLLAFVK 274 (275)
T ss_dssp SSSCSTTTHHHHHHH---STTEEEEEETTCCTTHHH-HCHHHHHHHHHHHHH
T ss_pred ccCCcHHHHHHHHhh---CCCcEEEEcCCCCccHHH-hCHHHHHHHHHHHhh
Confidence 999987544433332 224899999999998763 455678888999985
No 125
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=99.76 E-value=3.5e-17 Score=166.68 Aligned_cols=229 Identities=18% Similarity=0.263 Sum_probs=136.1
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
..+|.++++..+. ..|+||++||.+.+ ...|...+..|+++||.|+++|+||. |.+.. + ...
T Consensus 5 ~~~g~~l~y~~~g--------~~~~vvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G~---G~S~~---~--~~~ 66 (273)
T 1a8s_A 5 TRDGTQIYYKDWG--------SGQPIVFSHGWPLN--ADSWESQMIFLAAQGYRVIAHDRRGH---GRSSQ---P--WSG 66 (273)
T ss_dssp CTTSCEEEEEEES--------CSSEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTS---TTSCC---C--SSC
T ss_pred cCCCcEEEEEEcC--------CCCEEEEECCCCCc--HHHHhhHHhhHhhCCcEEEEECCCCC---CCCCC---C--CCC
Confidence 3456667544331 23679999997655 45788888999999999999999994 44421 1 112
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhC-CCceeEEEecCCccchhhhhcC-C-CCCcch-----
Q 004149 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGT-T-DIPDWC----- 666 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~p~~~~~~~~~~-~-~~~~~~----- 666 (771)
..++++.+.+..+++. ++.+++.|+||||||.+++.++.++ |++++++|+.++.......... . ......
T Consensus 67 ~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (273)
T 1a8s_A 67 NDMDTYADDLAQLIEH--LDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIR 144 (273)
T ss_dssp CSHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH--hCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHHHHHH
Confidence 2344444444444443 2456899999999999999877765 8999999998864211000000 0 000000
Q ss_pred ---------hhhhccC-C--CCCcCCCCCChhhHH-------------------HHhhcCccccccCCCCcEEEEeeCCC
Q 004149 667 ---------YVESYGS-K--GKDSFTESPSVEDLT-------------------RFHSKSPISHISKVKTPTIFLLGAQD 715 (771)
Q Consensus 667 ---------~~~~~~~-~--~~~~~~~~~~~~~~~-------------------~~~~~sp~~~~~~i~~P~Lii~G~~D 715 (771)
+...+.. . ............... .+...+....+.++++|+|+++|++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 224 (273)
T 1a8s_A 145 QASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDAD 224 (273)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTC
T ss_pred HHhHhhHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhhhhcCCCCEEEEECCCC
Confidence 0000000 0 000000000111100 01112223356789999999999999
Q ss_pred CccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004149 716 LRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 716 ~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 767 (771)
..+|++...+.+..+. .+.++++++++||.+.. +...++.+.+.+||+
T Consensus 225 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 225 QVVPIEASGIASAALV---KGSTLKIYSGAPHGLTD-THKDQLNADLLAFIK 272 (273)
T ss_dssp SSSCSTTTHHHHHHHS---TTCEEEEETTCCSCHHH-HTHHHHHHHHHHHHH
T ss_pred ccCChHHHHHHHHHhC---CCcEEEEeCCCCCcchh-hCHHHHHHHHHHHHh
Confidence 9999885444333322 24789999999998753 455678888999986
No 126
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=99.76 E-value=9.3e-18 Score=172.31 Aligned_cols=229 Identities=14% Similarity=0.110 Sum_probs=142.8
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCC-cchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004149 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~-~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
.+|..+++..+-|+ ..|+||++||.+.+ .. .|...+..| +.||.|+++|+|| +|.+... +.....
T Consensus 10 ~~g~~l~~~~~G~~------~~~~vvllHG~~~~--~~~~w~~~~~~L-~~~~~vi~~Dl~G---~G~S~~~--~~~~~~ 75 (286)
T 2yys_A 10 VGEAELYVEDVGPV------EGPALFVLHGGPGG--NAYVLREGLQDY-LEGFRVVYFDQRG---SGRSLEL--PQDPRL 75 (286)
T ss_dssp CSSCEEEEEEESCT------TSCEEEEECCTTTC--CSHHHHHHHGGG-CTTSEEEEECCTT---STTSCCC--CSCGGG
T ss_pred ECCEEEEEEeecCC------CCCEEEEECCCCCc--chhHHHHHHHHh-cCCCEEEEECCCC---CCCCCCC--ccCccc
Confidence 35677876665442 34789999997765 45 577778778 5689999999999 4444210 111012
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhh----hh-cC--CCCCc-ch
Q 004149 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL----MV-GT--TDIPD-WC 666 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~----~~-~~--~~~~~-~~ 666 (771)
..++++.+.+..+++. ++.+++.|+||||||.+++.++.++|+ ++++|+.+|...... .. .. ..... ..
T Consensus 76 ~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (286)
T 2yys_A 76 FTVDALVEDTLLLAEA--LGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLAARLAEAAGLAPLPDPEE 152 (286)
T ss_dssp CCHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHHHHHHHHTTCCCCSCHHH
T ss_pred CcHHHHHHHHHHHHHH--hCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHHHHHHHHhccccchhHHH
Confidence 3455555555555554 234689999999999999999999999 999999998653221 00 00 00000 00
Q ss_pred -h------------hhhc--cCC-------CC-CcCCCCCChhhHH-----HHhhcCccccccCCCCcEEEEeeCCCCcc
Q 004149 667 -Y------------VESY--GSK-------GK-DSFTESPSVEDLT-----RFHSKSPISHISKVKTPTIFLLGAQDLRV 718 (771)
Q Consensus 667 -~------------~~~~--~~~-------~~-~~~~~~~~~~~~~-----~~~~~sp~~~~~~i~~P~Lii~G~~D~~v 718 (771)
. ...+ ... .. ..+.......... .....+....+.++++|+|+++|++|..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~ 232 (286)
T 2yys_A 153 NLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPERRPLYVLVGERDGTS 232 (286)
T ss_dssp HHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCGGGCCCCSSCEEEEEETTCTTT
T ss_pred HHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChhhhhhhcCCCEEEEEeCCCCcC
Confidence 0 0000 000 00 0000000000000 01111233456788999999999999999
Q ss_pred CcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004149 719 PVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 719 p~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
|++ ++.+.+ +.. .++++++++||..... ...++.+.+.+||++
T Consensus 233 ~~~-~~~~~~-~~~----~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~ 275 (286)
T 2yys_A 233 YPY-AEEVAS-RLR----APIRVLPEAGHYLWID-APEAFEEAFKEALAA 275 (286)
T ss_dssp TTT-HHHHHH-HHT----CCEEEETTCCSSHHHH-CHHHHHHHHHHHHHT
T ss_pred CHh-HHHHHh-CCC----CCEEEeCCCCCCcChh-hHHHHHHHHHHHHHh
Confidence 999 888888 765 5788999999986643 356888999999976
No 127
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.76 E-value=1.2e-16 Score=186.46 Aligned_cols=263 Identities=11% Similarity=0.070 Sum_probs=175.2
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004149 100 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
.+..++|||| ++++|..+ ..++.++ .+++..+++...... ..++|||||++|||+.
T Consensus 83 ~v~~~~~spd-~~~~~~~~-----~~i~~~d~~~~~~~~l~~~~~~~----------~~~~~SpdG~~la~~~------- 139 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLFTQ-----GGLVGFDMLARKVTYLFDTNEET----------ASLDFSPVGDRVAYVR------- 139 (706)
T ss_dssp CCEEEEETTT-TEEEEEET-----TEEEEEETTTTEEEEEECCTTCC----------TTCEECTTSSEEEEEE-------
T ss_pred CceeEEECCC-CeEEEEEC-----CEEEEEECCCCceEEccCCcccc----------cCCcCCCCCCEEEEEE-------
Confidence 4788999999 88888755 2466655 555555555433333 5899999999999962
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccC-----CceeeccCCCCCCc------------
Q 004149 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS-----GEVQAVKGIPKSLS------------ 241 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~-----~~~~~l~~~~~~~~------------ 241 (771)
...|++||+.+ ++.+++ +.....
T Consensus 140 --------------------------------------~~~i~v~~~~~~~~~~g~~~~~--~~~~~~~~~~g~~~~~ee 179 (706)
T 2z3z_A 140 --------------------------------------NHNLYIARGGKLGEGMSRAIAV--TIDGTETLVYGQAVHQRE 179 (706)
T ss_dssp --------------------------------------TTEEEEEECBCTTSCCCCCEES--CSCCBTTEEESSCCGGGC
T ss_pred --------------------------------------CCeEEEEecCcccccCCCcEEe--ccCCCCCeEcccchhhhh
Confidence 25799999999 888887 333222
Q ss_pred ---cceEEEecCCCCCccEEEEEeecCccee--------------eeeeee----ccCCceeEEEecccccchhhhhhhh
Q 004149 242 ---VGQVVWAPLNEGLHQYLVFVGWSSETRK--------------LGIKYC----YNRPCALYAVRVSLYKSEASELELK 300 (771)
Q Consensus 242 ---~~~~~wspDg~~~~~~l~~~~~~~~~~~--------------~g~~~~----~~~~~~l~~~d~~~~~~~~~~~~~~ 300 (771)
+..+.|||||+. |+|.+....... ....|. .+....|+++|+
T Consensus 180 ~~~~~~~~~SpDg~~----la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~------------- 242 (706)
T 2z3z_A 180 FGIEKGTFWSPKGSC----LAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHL------------- 242 (706)
T ss_dssp TTCCCSEEECTTSSE----EEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEET-------------
T ss_pred cCCCceEEECCCCCE----EEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEEC-------------
Confidence 478999999999 999874321100 000000 113357999998
Q ss_pred cCCCCCCcceecCC---CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCC-CCCCCccceeeEEeccc
Q 004149 301 ESSSEDLPVVNLTE---SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN-GNFSSLEKIVDVIPVVQ 376 (771)
Q Consensus 301 ~~~~~~~~~~~lt~---~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~-~~~~~~~~~~~~~~~~~ 376 (771)
.+++.+.+.. ....+..+.|||||++|++.+.+.. .....|+++|+.++ ..+.+....
T Consensus 243 ----~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~------~~~~~v~~~d~~~g~~~~~~~~~~-------- 304 (706)
T 2z3z_A 243 ----ATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRA------QNECKVNAYDAETGRFVRTLFVET-------- 304 (706)
T ss_dssp ----TTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTT------SCEEEEEEEETTTCCEEEEEEEEE--------
T ss_pred ----CCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCC------CCeeEEEEEECCCCceeeEEEEcc--------
Confidence 7777666653 2345788999999999999876531 23467999999887 322221110
Q ss_pred ccCCCCCcccccCCCCCCcccc--CCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCcee-eEEeecCCEEEEEEeC
Q 004149 377 CAEGDCFPGLYSSSILSNPWLS--DGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSW-SLLTLDGDNIIAVSSS 453 (771)
Q Consensus 377 ~~~~~~f~g~~~~~~~~~~~s~--dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~-~~~s~d~~~l~~~~s~ 453 (771)
... |......+.||| ||+ +++++..++..+||.++.+++.++.++........ ..|++|++.|++..+.
T Consensus 305 ---~~~----~~~~~~~~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 305 ---DKH----YVEPLHPLTFLPGSNNQ-FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp ---CSS----CCCCCSCCEECTTCSSE-EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred ---CCC----eECccCCceeecCCCCE-EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 000 101134678999 998 55666667788999999877888888776544433 6899999999888865
Q ss_pred CCC-CCeEEEEEeccc
Q 004149 454 PVD-VPQVKYGYFVDK 468 (771)
Q Consensus 454 ~~~-p~~l~~~~~~~~ 468 (771)
... -..||..++.++
T Consensus 377 ~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 377 ASPLERHFYCIDIKGG 392 (706)
T ss_dssp SCTTCBEEEEEETTCC
T ss_pred CCCceEEEEEEEcCCC
Confidence 321 246787776543
No 128
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=99.76 E-value=9.3e-18 Score=170.04 Aligned_cols=221 Identities=14% Similarity=0.098 Sum_probs=137.7
Q ss_pred CCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCC
Q 004149 534 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 613 (771)
Q Consensus 534 ~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~ 613 (771)
....|+||++||.+.+ ...|...+..|+++||.|+++|+||.+ .+... .......++..+.+..+++.. -
T Consensus 9 ~~~~~~vvllHG~~~~--~~~~~~~~~~l~~~g~~v~~~D~~G~G---~S~~~----~~~~~~~~~~~~~~~~~l~~l-~ 78 (267)
T 3sty_A 9 PFVKKHFVLVHAAFHG--AWCWYKIVALMRSSGHNVTALDLGASG---INPKQ----ALQIPNFSDYLSPLMEFMASL-P 78 (267)
T ss_dssp -CCCCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTST---TCSCC----GGGCCSHHHHHHHHHHHHHTS-C
T ss_pred CCCCCeEEEECCCCCC--cchHHHHHHHHHhcCCeEEEeccccCC---CCCCc----CCccCCHHHHHHHHHHHHHhc-C
Confidence 3456899999997755 457888999999999999999999944 43211 011134555555555555442 1
Q ss_pred CCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhh-----hhcCC--CCCcchhhhhc-cC--CC--------
Q 004149 614 NPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL-----MVGTT--DIPDWCYVESY-GS--KG-------- 675 (771)
Q Consensus 614 d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~-----~~~~~--~~~~~~~~~~~-~~--~~-------- 675 (771)
+.+++.|+|||+||.+++.++.++|++++++|+.++...... ..... ....|...... .. ..
T Consensus 79 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (267)
T 3sty_A 79 ANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAG 158 (267)
T ss_dssp TTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECC
T ss_pred CCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhh
Confidence 467899999999999999999999999999998888543210 00000 00011000000 00 00
Q ss_pred ----CCcCCCCCChhhHHH---------------HhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCC
Q 004149 676 ----KDSFTESPSVEDLTR---------------FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE 736 (771)
Q Consensus 676 ----~~~~~~~~~~~~~~~---------------~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~ 736 (771)
...+........... +............++|+|+++|++|..+|++.++.+.+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---- 234 (267)
T 3sty_A 159 PKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNPP---- 234 (267)
T ss_dssp HHHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHSCC----
T ss_pred HHHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccCHHHHHHHHHhCCC----
Confidence 000001111111111 111111112222358999999999999999888887777643
Q ss_pred EEEEEeCCCCccCCCCCChHHHHHHHHHHHHHH
Q 004149 737 TKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 737 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 769 (771)
+++++++++||.... +...++.+.+.+|++++
T Consensus 235 ~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 235 DEVKEIEGSDHVTMM-SKPQQLFTTLLSIANKY 266 (267)
T ss_dssp SEEEECTTCCSCHHH-HSHHHHHHHHHHHHHHC
T ss_pred ceEEEeCCCCccccc-cChHHHHHHHHHHHHhc
Confidence 689999999998653 44568888999999874
No 129
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=99.76 E-value=5e-18 Score=164.44 Aligned_cols=187 Identities=13% Similarity=0.100 Sum_probs=118.8
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHC--CcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCC
Q 004149 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSV--GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~--G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 614 (771)
.|+|||+||...+..........++++++ +|.|++||++| +|.+ ..+.++.++.. .+
T Consensus 2 mptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~---~g~~----------------~~~~l~~~~~~--~~ 60 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPP---YPAE----------------AAEMLESIVMD--KA 60 (202)
T ss_dssp -CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCS---SHHH----------------HHHHHHHHHHH--HT
T ss_pred CcEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCC---CHHH----------------HHHHHHHHHHh--cC
Confidence 48999999965443222223345566665 49999999998 4432 23333333333 24
Q ss_pred CCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhc
Q 004149 615 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSK 694 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (771)
.++|+|+|+||||++|+.++.++|.....++...+............. .+ .. ...+. ...... ....
T Consensus 61 ~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~---~~~~~--~~~~~~--~~~~ 127 (202)
T 4fle_A 61 GQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGENQ-NP-----YT---GQKYV--LESRHI--YDLK 127 (202)
T ss_dssp TSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEEE-CT-----TT---CCEEE--ECHHHH--HHHH
T ss_pred CCcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhhc-cc-----cc---ccccc--chHHHH--HHHH
Confidence 679999999999999999999999887777665554332211100000 00 00 00000 001111 1122
Q ss_pred CccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004149 695 SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 695 sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 767 (771)
.....+.++++|+|++||++|.+||++++.++++ ++++++++|++|.+... .++++.|.+||+
T Consensus 128 ~~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l~~-------~~~l~i~~g~~H~~~~~---~~~~~~I~~FL~ 190 (202)
T 4fle_A 128 AMQIEKLESPDLLWLLQQTGDEVLDYRQAVAYYT-------PCRQTVESGGNHAFVGF---DHYFSPIVTFLG 190 (202)
T ss_dssp TTCCSSCSCGGGEEEEEETTCSSSCHHHHHHHTT-------TSEEEEESSCCTTCTTG---GGGHHHHHHHHT
T ss_pred hhhhhhhccCceEEEEEeCCCCCCCHHHHHHHhh-------CCEEEEECCCCcCCCCH---HHHHHHHHHHHh
Confidence 3344567788999999999999999999888763 36899999999987543 356888999986
No 130
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=99.75 E-value=5.1e-18 Score=176.77 Aligned_cols=222 Identities=16% Similarity=0.162 Sum_probs=142.2
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|..+++....+ .|+||++||++.. ...|...+..|++ ||.|+++|+||.+. +. .......
T Consensus 56 ~~~~~~~~~~g~--------~p~vv~lhG~~~~--~~~~~~~~~~L~~-~~~v~~~D~~G~G~---S~-----~~~~~~~ 116 (314)
T 3kxp_A 56 GRITLNVREKGS--------GPLMLFFHGITSN--SAVFEPLMIRLSD-RFTTIAVDQRGHGL---SD-----KPETGYE 116 (314)
T ss_dssp SSCEEEEEEECC--------SSEEEEECCTTCC--GGGGHHHHHTTTT-TSEEEEECCTTSTT---SC-----CCSSCCS
T ss_pred CCEEEEEEecCC--------CCEEEEECCCCCC--HHHHHHHHHHHHc-CCeEEEEeCCCcCC---CC-----CCCCCCC
Confidence 466666554422 5799999997655 3467777888876 79999999999544 32 1122234
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhh--------cCC--CCCcch
Q 004149 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV--------GTT--DIPDWC 666 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~--------~~~--~~~~~~ 666 (771)
.+++.+.+..+++.. +.++++|+|||+||.+++.++.++|++++++|+.+|........ ... ....+.
T Consensus 117 ~~~~~~dl~~~l~~l--~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (314)
T 3kxp_A 117 ANDYADDIAGLIRTL--ARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFEDIK 194 (314)
T ss_dssp HHHHHHHHHHHHHHH--TSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBSSHH
T ss_pred HHHHHHHHHHHHHHh--CCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhcCHH
Confidence 566666666555542 34789999999999999999999999999999998865321110 000 000000
Q ss_pred hhhhccCCCCCcCCCCCChhhHHHH---------------------------hhcCccccccCCCCcEEEEeeCCCCccC
Q 004149 667 YVESYGSKGKDSFTESPSVEDLTRF---------------------------HSKSPISHISKVKTPTIFLLGAQDLRVP 719 (771)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~sp~~~~~~i~~P~Lii~G~~D~~vp 719 (771)
....+. ...+.. ........+ ...+....+.++++|+|+++|++|.++|
T Consensus 195 ~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~~~ 270 (314)
T 3kxp_A 195 AVEAYL---AGRYPN-IPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVS 270 (314)
T ss_dssp HHHHHH---HHHSTT-SCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEEEEEETTCSSSC
T ss_pred HHHHHH---Hhhccc-CchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEEEEecCCCccCC
Confidence 000000 000000 000100000 0113444567889999999999999999
Q ss_pred cHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004149 720 VSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 720 ~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
++.+..+.+.+.. ++++++++++|.+.. +...++.+.+.+||++
T Consensus 271 ~~~~~~~~~~~~~----~~~~~~~g~gH~~~~-e~~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 271 AAALAKTSRLRPD----LPVVVVPGADHYVNE-VSPEITLKAITNFIDA 314 (314)
T ss_dssp HHHHHHHHHHCTT----SCEEEETTCCSCHHH-HCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCC----ceEEEcCCCCCcchh-hCHHHHHHHHHHHHhC
Confidence 9998888877743 688999999998753 3355788889889863
No 131
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=99.75 E-value=2.4e-17 Score=180.47 Aligned_cols=231 Identities=16% Similarity=0.188 Sum_probs=142.1
Q ss_pred ccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcc
Q 004149 514 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 514 ~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~ 593 (771)
.+.+|..++.... + ..|+||++||++.. ...|...+..|+++||.|+++|+||.+.+... ..
T Consensus 9 ~~~dG~~l~y~~~------G--~gp~VV~lHG~~~~--~~~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~--------~~ 70 (456)
T 3vdx_A 9 ENSTSIDLYYEDH------G--TGVPVVLIHGFPLS--GHSWERQSAALLDAGYRVITYDRRGFGQSSQP--------TT 70 (456)
T ss_dssp ETTEEEEEEEEEE------S--SSEEEEEECCTTCC--GGGGTTHHHHHHHHTEEEEEECCTTSTTSCCC--------SS
T ss_pred cccCCeEEEEEEe------C--CCCEEEEECCCCCc--HHHHHHHHHHHHHCCcEEEEECCCCCCCCCCC--------CC
Confidence 4556777764332 1 34899999997765 44677788899899999999999995443211 11
Q ss_pred ccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhC-CCceeEEEecCCccchhhhhcCCCCCc--------
Q 004149 594 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGTTDIPD-------- 664 (771)
Q Consensus 594 ~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~p~~~~~~~~~~~~~~~-------- 664 (771)
...++++.+.+..+++. ++.++++|+|||+||.+++.+++++ |++++++|+.+|...............
T Consensus 71 ~~s~~~~a~dl~~~l~~--l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (456)
T 3vdx_A 71 GYDYDTFAADLNTVLET--LDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDG 148 (456)
T ss_dssp CCSHHHHHHHHHHHHHH--HTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH--hCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHHHH
Confidence 22334444333333333 2456899999999999999888877 899999999998753211100000000
Q ss_pred ---------chh----hhhccCCCCCcCCCCCChhhHHHH------------------hhcCccccccCCCCcEEEEeeC
Q 004149 665 ---------WCY----VESYGSKGKDSFTESPSVEDLTRF------------------HSKSPISHISKVKTPTIFLLGA 713 (771)
Q Consensus 665 ---------~~~----~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~sp~~~~~~i~~P~Lii~G~ 713 (771)
..+ ...+... ...............+ ...+....+.++++|+|+++|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~PvLiI~G~ 227 (456)
T 3vdx_A 149 IVAAVKADRYAFYTGFFNDFYNL-DENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGT 227 (456)
T ss_dssp HHHHHHHCHHHHHHHHHHHHTTT-TTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCCCTTTSTTCCSCCEEEEET
T ss_pred HHHhhhccchHHHHHHHHHHhcc-cccccccccHHHHHHHhhhccccchhhhhhhhhhhhhhHHHHhhhCCCCEEEEEeC
Confidence 000 0000000 0000000000100000 0123334567889999999999
Q ss_pred CCCccCcH-HHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHh
Q 004149 714 QDLRVPVS-NGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 714 ~D~~vp~~-~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
+|..+|++ ....+.+.+ .+++++++++++|.+.. +....+.+.+.+||++++
T Consensus 228 ~D~~vp~~~~~~~l~~~~----~~~~~~~i~gagH~~~~-e~p~~v~~~I~~FL~~~l 280 (456)
T 3vdx_A 228 GDRTLPIENTARVFHKAL----PSAEYVEVEGAPHGLLW-THAEEVNTALLAFLAKAL 280 (456)
T ss_dssp TCSSSCGGGTHHHHHHHC----TTSEEEEETTCCSCTTT-TTHHHHHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHC----CCceEEEeCCCCCcchh-hCHHHHHHHHHHHHHHhh
Confidence 99999988 444444433 34799999999998764 556788999999999875
No 132
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=99.75 E-value=3.6e-17 Score=166.67 Aligned_cols=227 Identities=15% Similarity=0.195 Sum_probs=136.4
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcccc
Q 004149 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 595 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~ 595 (771)
.+|.++++..+. ..|+||++||.+.+ ...|...+..|+++||.|+++|+||. |.+... ....
T Consensus 6 ~~g~~l~y~~~g--------~g~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G~---G~S~~~-----~~~~ 67 (274)
T 1a8q_A 6 RDGVEIFYKDWG--------QGRPVVFIHGWPLN--GDAWQDQLKAVVDAGYRGIAHDRRGH---GHSTPV-----WDGY 67 (274)
T ss_dssp TTSCEEEEEEEC--------SSSEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTS---TTSCCC-----SSCC
T ss_pred cCCCEEEEEecC--------CCceEEEECCCcch--HHHHHHHHHHHHhCCCeEEEEcCCCC---CCCCCC-----CCCC
Confidence 356667544331 23679999997655 45788888999999999999999994 443211 1122
Q ss_pred chhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhC-CCceeEEEecCCccchhhhhcC-C-CCCcchh-----
Q 004149 596 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGT-T-DIPDWCY----- 667 (771)
Q Consensus 596 ~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~p~~~~~~~~~~-~-~~~~~~~----- 667 (771)
..+++.+.+..+++. ++.+++.|+||||||.+++.++.++ |++++++|+.++.......... . ..+...+
T Consensus 68 ~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (274)
T 1a8q_A 68 DFDTFADDLNDLLTD--LDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKN 145 (274)
T ss_dssp SHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH--cCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHHHHHHH
Confidence 344444444444443 2456899999999999999877776 8999999998864311000000 0 0000000
Q ss_pred ---------hh----hccCCCCCcCCCCCChhhHH-------------------HHhhcCccccccCCCCcEEEEeeCCC
Q 004149 668 ---------VE----SYGSKGKDSFTESPSVEDLT-------------------RFHSKSPISHISKVKTPTIFLLGAQD 715 (771)
Q Consensus 668 ---------~~----~~~~~~~~~~~~~~~~~~~~-------------------~~~~~sp~~~~~~i~~P~Lii~G~~D 715 (771)
.. .+.. .............. .+...+....+.++++|+|+++|++|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 223 (274)
T 1a8q_A 146 GVLTERSQFWKDTAEGFFS--ANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDD 223 (274)
T ss_dssp HHHHHHHHHHHHHHHHHTT--TTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTC
T ss_pred HhhccHHHHHHHhcccccc--cccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHhhcCCCCEEEEecCcC
Confidence 00 0000 00000000001000 11112233456789999999999999
Q ss_pred CccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCC-CChHHHHHHHHHHHH
Q 004149 716 LRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERP-QSDFESFLNIGLWFK 767 (771)
Q Consensus 716 ~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~-~~~~~~~~~i~~wl~ 767 (771)
.++|++...+.+..+ ..++++++++++||.+... +...++.+.+.+||+
T Consensus 224 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 224 QVVPIDATGRKSAQI---IPNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp SSSCGGGTHHHHHHH---STTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred CCCCcHHHHHHHHhh---CCCceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 999988544433332 1247899999999987753 245678888999985
No 133
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=99.75 E-value=3.2e-17 Score=162.86 Aligned_cols=203 Identities=12% Similarity=0.105 Sum_probs=134.1
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHH--CCcEEEEECCCCCCC------CChhhhhcCCCCc
Q 004149 521 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS--VGYSLLIVNYRGSLG------FGEEALQSLPGKV 592 (771)
Q Consensus 521 l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~--~G~~V~~~d~rG~~~------~g~~~~~~~~~~~ 592 (771)
+...++.|+ .+..++||++||.+.+ ...+...+..|.. .++.+++|+-+.... .+..|........
T Consensus 25 l~y~ii~P~----~~~~~~VI~LHG~G~~--~~dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~ 98 (246)
T 4f21_A 25 MNYELMEPA----KQARFCVIWLHGLGAD--GHDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDA 98 (246)
T ss_dssp CCEEEECCS----SCCCEEEEEEEC--CC--CCCGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC--
T ss_pred cCceEeCCC----CcCCeEEEEEcCCCCC--HHHHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccccc
Confidence 556678886 2345799999996554 3344444444432 368888887432110 1122221111000
Q ss_pred -------cccchhhHHHHHHHHHH---cCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCC
Q 004149 593 -------GSQDVNDVLTAIDHVID---MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDI 662 (771)
Q Consensus 593 -------~~~~~~D~~~~i~~l~~---~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~ 662 (771)
....+....+.++.+++ ...++++||+|+|+|+||.+++.++.++|+.++++++.++.+......
T Consensus 99 ~~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~~~----- 173 (246)
T 4f21_A 99 NSLNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWDNF----- 173 (246)
T ss_dssp -CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHHHH-----
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCccccc-----
Confidence 00112233333333322 234899999999999999999999999999999999998864211100
Q ss_pred CcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEe
Q 004149 663 PDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF 742 (771)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~ 742 (771)
.. ... ....++|+|++||+.|++||++.++++++.|++.|.++++..|
T Consensus 174 ---------~~-------------------~~~----~~~~~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y 221 (246)
T 4f21_A 174 ---------KG-------------------KIT----SINKGLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHY 221 (246)
T ss_dssp ---------ST-------------------TCC----GGGTTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred ---------cc-------------------ccc----ccccCCchhhcccCCCCccCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 00 000 0113579999999999999999999999999999999999999
Q ss_pred CCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 743 PNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 743 ~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
++.+|.+. .+.+..+.+||++.||
T Consensus 222 ~g~gH~i~-----~~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 222 VGMQHSVC-----MEEIKDISNFIAKTFK 245 (246)
T ss_dssp SSCCSSCC-----HHHHHHHHHHHHHHTT
T ss_pred CCCCCccC-----HHHHHHHHHHHHHHhC
Confidence 99999875 4567899999999886
No 134
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=99.75 E-value=8.8e-18 Score=169.24 Aligned_cols=218 Identities=16% Similarity=0.079 Sum_probs=137.2
Q ss_pred cEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCe
Q 004149 538 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 617 (771)
Q Consensus 538 p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 617 (771)
|+||++||.+.+ ...|...+..|+++||.|+++|+||.+.+.... ......++..+.+..+++.... .++
T Consensus 5 ~~vv~lHG~~~~--~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~l~~l~~-~~~ 74 (258)
T 3dqz_A 5 HHFVLVHNAYHG--AWIWYKLKPLLESAGHRVTAVELAASGIDPRPI-------QAVETVDEYSKPLIETLKSLPE-NEE 74 (258)
T ss_dssp CEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTTSTTCSSCG-------GGCCSHHHHHHHHHHHHHTSCT-TCC
T ss_pred CcEEEECCCCCc--cccHHHHHHHHHhCCCEEEEecCCCCcCCCCCC-------CccccHHHhHHHHHHHHHHhcc-cCc
Confidence 889999997765 456888899999999999999999954432210 1113455555555555554212 378
Q ss_pred EEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhc-------CCCCCcchhhhhc---cC-----------C-C
Q 004149 618 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-------TTDIPDWCYVESY---GS-----------K-G 675 (771)
Q Consensus 618 i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~-------~~~~~~~~~~~~~---~~-----------~-~ 675 (771)
+.|+|||+||.+++.++.++|++++++|+.+|......... ......|...... +. . .
T Consensus 75 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (258)
T 3dqz_A 75 VILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFM 154 (258)
T ss_dssp EEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHHH
T ss_pred eEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHHH
Confidence 99999999999999999999999999999888543210000 0000001000000 00 0 0
Q ss_pred CCcCCCCCChhhHHHHh--------------hcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEE
Q 004149 676 KDSFTESPSVEDLTRFH--------------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV 741 (771)
Q Consensus 676 ~~~~~~~~~~~~~~~~~--------------~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 741 (771)
...+...........+. ...........++|+|+++|++|..+|++.++.+.+.+.. .++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~ 230 (258)
T 3dqz_A 155 KARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFNV----SKVYE 230 (258)
T ss_dssp HHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHSCC----SCEEE
T ss_pred HHHhhccCCHHHHHHHHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeCHHHHHHHHHhCCc----ccEEE
Confidence 00000011111111110 0112222223368999999999999999988888777643 58889
Q ss_pred eCCCCccCCCCCChHHHHHHHHHHHHHHh
Q 004149 742 FPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 742 ~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
++++||.... +...++.+.|.+|+++||
T Consensus 231 ~~~~gH~~~~-~~p~~~~~~i~~fl~~~~ 258 (258)
T 3dqz_A 231 IDGGDHMVML-SKPQKLFDSLSAIATDYM 258 (258)
T ss_dssp ETTCCSCHHH-HSHHHHHHHHHHHHHHTC
T ss_pred cCCCCCchhh-cChHHHHHHHHHHHHHhC
Confidence 9999998664 455688899999999875
No 135
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=99.75 E-value=3.3e-18 Score=189.30 Aligned_cols=242 Identities=13% Similarity=0.095 Sum_probs=158.3
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCC-----------------cc----hHHHHHHHHCCcEEE
Q 004149 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-----------------SY----SKSLAFLSSVGYSLL 570 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~-----------------~~----~~~~~~la~~G~~V~ 570 (771)
.+...||.+|.+.+|+|++ .++.|+||+.||.+...... .+ ...++.|+++||+|+
T Consensus 45 ~i~~~DG~~L~a~l~~P~~---~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv 121 (560)
T 3iii_A 45 TVEMRDGEKLYINIFRPNK---DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVV 121 (560)
T ss_dssp EEECTTSCEEEEEEEECSS---SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEE
T ss_pred EEECCCCcEEEEEEEecCC---CCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEE
Confidence 4556689999999999983 57899999999854432100 00 013678999999999
Q ss_pred EECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCc
Q 004149 571 IVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 650 (771)
Q Consensus 571 ~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~ 650 (771)
++|+||.++++..+. .++..+.+|+.++++|+.+++.++ .||+++|+|+||++++.+|+.+|+.++|+|+.+|+
T Consensus 122 ~~D~RG~G~S~G~~~-----~~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~ 195 (560)
T 3iii_A 122 KVALRGSDKSKGVLS-----PWSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGL 195 (560)
T ss_dssp EEECTTSTTCCSCBC-----TTSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCC
T ss_pred EEcCCCCCCCCCccc-----cCChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCc
Confidence 999999887765532 234467899999999999987776 89999999999999999999999999999999999
Q ss_pred cchhhh-hcCCCCCcchhh--------hhccCC-CCC----cCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCC
Q 004149 651 CNLALM-VGTTDIPDWCYV--------ESYGSK-GKD----SFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDL 716 (771)
Q Consensus 651 ~~~~~~-~~~~~~~~~~~~--------~~~~~~-~~~----~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~ 716 (771)
.++..- .....+....+. ..+... ... .+...+..+ +.+...++ .+++|++|+|+++|-.|.
T Consensus 196 ~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~d--~~W~~~~~--~~~~I~vPvl~v~Gw~D~ 271 (560)
T 3iii_A 196 NDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFD--DFWKQRQV--PLSQIKTPLLTCASWSTQ 271 (560)
T ss_dssp CBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSSC--HHHHTTBC--CGGGCCSCEEEEEEGGGT
T ss_pred ccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCcc--hHhhccCC--chhhCCCCEEEeCCcCCC
Confidence 986531 111111100000 000000 000 000011111 12333333 578999999999999997
Q ss_pred ccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 717 RVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 717 ~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
.+....+.+.+++++..+ ..+++.+ .+|... ....+.++..++||++|||
T Consensus 272 ~~~~~g~l~~y~~l~~~~--k~l~ih~-~~~~~~--~~~~~~~~~~~~wfD~~Lk 321 (560)
T 3iii_A 272 GLHNRGSFEGFKQAASEE--KWLYVHG-RKEWES--YYARENLERQKSFFDFYLK 321 (560)
T ss_dssp TTTHHHHHHHHHHCCCSS--EEEEEES-SCHHHH--HHSHHHHHHHHHHHHHHTS
T ss_pred cccchhHHHHHHhccccC--cEEEECC-CCCcCc--ccChhHHHHHHHHHHHHhC
Confidence 555566677777765432 3333332 223210 0012466889999999997
No 136
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=99.75 E-value=6.2e-18 Score=171.60 Aligned_cols=227 Identities=15% Similarity=0.251 Sum_probs=141.5
Q ss_pred ccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcc
Q 004149 514 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 514 ~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~ 593 (771)
...+|..+++...-+ ...|+||++||.+.. ...|...+..|++ +|.|+++|+|| +|.+... . .
T Consensus 10 ~~~~g~~l~y~~~G~------~~~p~lvl~hG~~~~--~~~w~~~~~~L~~-~~~vi~~D~rG---~G~S~~~--~---~ 72 (266)
T 3om8_A 10 ATSDGASLAYRLDGA------AEKPLLALSNSIGTT--LHMWDAQLPALTR-HFRVLRYDARG---HGASSVP--P---G 72 (266)
T ss_dssp ECTTSCEEEEEEESC------TTSCEEEEECCTTCC--GGGGGGGHHHHHT-TCEEEEECCTT---STTSCCC--C---S
T ss_pred eccCCcEEEEEecCC------CCCCEEEEeCCCccC--HHHHHHHHHHhhc-CcEEEEEcCCC---CCCCCCC--C---C
Confidence 345678887666543 235889999997654 4567788888875 79999999999 5544311 1 1
Q ss_pred ccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhh----------hhcCCCCC
Q 004149 594 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL----------MVGTTDIP 663 (771)
Q Consensus 594 ~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~----------~~~~~~~~ 663 (771)
...++++.+.+..+++. ++.+++.|+||||||.+++.++.++|++++++|+.++...... ........
T Consensus 73 ~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (266)
T 3om8_A 73 PYTLARLGEDVLELLDA--LEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAEDMS 150 (266)
T ss_dssp CCCHHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHHHHHCSSSH
T ss_pred CCCHHHHHHHHHHHHHH--hCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHHHHccccHH
Confidence 22345555445444444 2346899999999999999999999999999999876432100 00000000
Q ss_pred cch--hhhhccCCCCCcCCCCCC-hhh----------------HHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHH
Q 004149 664 DWC--YVESYGSKGKDSFTESPS-VED----------------LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGL 724 (771)
Q Consensus 664 ~~~--~~~~~~~~~~~~~~~~~~-~~~----------------~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~ 724 (771)
... ....+... ......+. .+. ...+...+....+.++++|+|+++|++|.++|++.++
T Consensus 151 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~ 228 (266)
T 3om8_A 151 ETAAGFLGNWFPP--ALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGE 228 (266)
T ss_dssp HHHHHHHHHHSCH--HHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSSCHHHHH
T ss_pred HHHHHHHHHhcCh--hhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCCCHHHHH
Confidence 000 00000000 00000000 000 0011112223457789999999999999999999998
Q ss_pred HHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004149 725 QYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 725 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 767 (771)
.+.+.+.. .++++++ +||... .+...++.+.+.+||.
T Consensus 229 ~l~~~ip~----a~~~~i~-~gH~~~-~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 229 LIAASIAG----ARLVTLP-AVHLSN-VEFPQAFEGAVLSFLG 265 (266)
T ss_dssp HHHHHSTT----CEEEEES-CCSCHH-HHCHHHHHHHHHHHHT
T ss_pred HHHHhCCC----CEEEEeC-CCCCcc-ccCHHHHHHHHHHHhc
Confidence 88887764 6888887 799765 4445577888888874
No 137
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.75 E-value=1.5e-17 Score=169.72 Aligned_cols=233 Identities=15% Similarity=0.117 Sum_probs=145.1
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchH---HHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~---~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~ 593 (771)
.|.++.++ |.|++ .|+||++||++.......|.. ..+.+++.||.|+++|++++..+.. +..... +
T Consensus 21 ~~~~~~~~-~~P~~------~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~-~~~~~~---~ 89 (280)
T 1r88_A 21 MGRDIPVA-FLAGG------PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTN-WEQDGS---K 89 (280)
T ss_dssp TTEEEEEE-EECCS------SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSB-CSSCTT---C
T ss_pred cCCcceEE-EeCCC------CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCCccCC-CCCCCC---C
Confidence 46778877 77763 289999999853222334443 4566778899999999977543311 100000 1
Q ss_pred ccchhh-H-HHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhc
Q 004149 594 SQDVND-V-LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESY 671 (771)
Q Consensus 594 ~~~~~D-~-~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 671 (771)
...+ + .+.+.++.++..+++++++|+|+||||++|+.++.++|++|+++++.+|..+.........+... ....
T Consensus 90 --~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~~~--~~~~ 165 (280)
T 1r88_A 90 --QWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGAIAAG--MQQF 165 (280)
T ss_dssp --BHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHHHHHHHHHH--HHHH
T ss_pred --cHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcCCccchhhHHHH--hhhc
Confidence 1212 1 13344444434477789999999999999999999999999999999998764321000000000 0000
Q ss_pred cCCCCCcCCCCCChhhHHHHhhcCccccccCC---CCcEEEEe----eCCCCc-------cCcHHHHHHHHHHHhCC-CC
Q 004149 672 GSKGKDSFTESPSVEDLTRFHSKSPISHISKV---KTPTIFLL----GAQDLR-------VPVSNGLQYARALREKG-VE 736 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i---~~P~Lii~----G~~D~~-------vp~~~~~~~~~~l~~~g-~~ 736 (771)
+......+.+.+ ....+...+|...+.++ ++|++|.+ |+.|.. ++.++++++++.|++.| ++
T Consensus 166 ~~~~~~~~~g~~---~~~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~~~~~~~~~~~L~~~g~~~ 242 (280)
T 1r88_A 166 GGVDTNGMWGAP---QLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRMFYNQYRSVGGHN 242 (280)
T ss_dssp HCCCTHHHHCCG---GGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHHHHHHHHHTTCCS
T ss_pred cccchhhhcCCC---chhhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHHHHHHHHHHHHHHHCCCcc
Confidence 000000000000 01234455676655554 58999999 999984 58899999999999999 99
Q ss_pred EEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHh
Q 004149 737 TKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 737 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
+++.++++++|.+. .....+...+.||.+-|
T Consensus 243 ~~~~~~~~g~H~~~---~w~~~l~~~l~~~~~~~ 273 (280)
T 1r88_A 243 GHFDFPASGDNGWG---SWAPQLGAMSGDIVGAI 273 (280)
T ss_dssp EEEECCSSCCSSHH---HHHHHHHHHHHHHHHHH
T ss_pred eEEEecCCCCcChh---HHHHHHHHHHHHHHHHH
Confidence 99999888899753 12334556666665544
No 138
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=99.75 E-value=4.2e-18 Score=191.40 Aligned_cols=243 Identities=14% Similarity=0.121 Sum_probs=162.0
Q ss_pred cccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-CcchHHH-HHHHHCCcEEEEECCCCCCCCChhhhhcCCC
Q 004149 513 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPG 590 (771)
Q Consensus 513 ~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~-~~~~~~~-~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~ 590 (771)
+...||.+|.+.+|.|+ ..++.|+||++||.+..... ..|...+ ..|+++||+|+++|+||+++++..+..
T Consensus 14 i~~~DG~~L~~~~~~P~---~~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~---- 86 (587)
T 3i2k_A 14 VPMRDGVRLAVDLYRPD---ADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVP---- 86 (587)
T ss_dssp EECTTSCEEEEEEEEEC---CSSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCCT----
T ss_pred EECCCCCEEEEEEEECC---CCCCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCcccc----
Confidence 44567899999999997 34578999999985433110 0122123 789999999999999998777654321
Q ss_pred CccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCc-cchhhhh-cCCCCC-----
Q 004149 591 KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL-CNLALMV-GTTDIP----- 663 (771)
Q Consensus 591 ~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~-~~~~~~~-~~~~~~----- 663 (771)
...+.+|+.++++||.+++..+ .+|+++|+||||++++.++.++|+.++++|+.++. .++..-. ......
T Consensus 87 --~~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~~~~~~~~gG~~~~~~~ 163 (587)
T 3i2k_A 87 --HVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRAPWYGPGGALSVEAL 163 (587)
T ss_dssp --TTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCCCCCSCTTCCCCHHHH
T ss_pred --ccchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCcccccccceeecCCccccchH
Confidence 2346899999999999887555 79999999999999999999989999999999988 6643211 000010
Q ss_pred -cchhhh------------------------------hc-cCCCCC-------------cC-CCCCChhhHHHHhhcCcc
Q 004149 664 -DWCYVE------------------------------SY-GSKGKD-------------SF-TESPSVEDLTRFHSKSPI 697 (771)
Q Consensus 664 -~~~~~~------------------------------~~-~~~~~~-------------~~-~~~~~~~~~~~~~~~sp~ 697 (771)
.|.... .+ ...... .. ...+ .....|...++.
T Consensus 164 ~~w~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~yw~~~s~~ 241 (587)
T 3i2k_A 164 LGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHP--DNDESWQSISLF 241 (587)
T ss_dssp HHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHTTTTCC--SCCHHHHTTCCH
T ss_pred HHHHHHhhhhcccccccCCccchhhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhhhhcCC--CCChHHhcCChh
Confidence 111100 00 000000 00 0001 111335566777
Q ss_pred ccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCC---------CCChH---HHHHHHHHH
Q 004149 698 SHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER---------PQSDF---ESFLNIGLW 765 (771)
Q Consensus 698 ~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~---------~~~~~---~~~~~i~~w 765 (771)
..+++|++|+|+++|..|..+ ..+.+++++|+..+. .++++-|. .|+... +.... +..+.+++|
T Consensus 242 ~~l~~I~vPvL~v~Gw~D~~~--~~~~~~~~~l~~~~~-~~L~iGPw-~H~~~~~~~g~~~~g~~~~~~~~~~~~~~~~w 317 (587)
T 3i2k_A 242 ERLGGLATPALITAGWYDGFV--GESLRTFVAVKDNAD-ARLVVGPW-SHSNLTGRNADRKFGIAATYPIQEATTMHKAF 317 (587)
T ss_dssp HHHTTCCCCEEEEEEEECTTH--HHHHHHHHHHTTTSC-EEEEEEEE-ETTBCSSEETTEECCGGGSCCHHHHHHHHHHH
T ss_pred hhhccCCCCEEEEccCCCccc--hHHHHHHHHHhhcCC-CEEEECCc-cccCccccCCCcccCCccccccchhhHHHHHH
Confidence 789999999999999999876 457788999987664 36666554 465311 11111 334889999
Q ss_pred HHHHhC
Q 004149 766 FKKYCK 771 (771)
Q Consensus 766 l~~~l~ 771 (771)
|++|||
T Consensus 318 FD~~Lk 323 (587)
T 3i2k_A 318 FDRHLR 323 (587)
T ss_dssp HHHHHS
T ss_pred HHHHhc
Confidence 999997
No 139
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=99.75 E-value=9.3e-18 Score=173.83 Aligned_cols=227 Identities=15% Similarity=0.189 Sum_probs=142.9
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|..+.+.... +.|+||++||.+.. ...|...+..|.++||.|+++|+||. |.+... .....
T Consensus 17 ~g~~l~~~~~g--------~~~~vv~~HG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~---G~S~~~-----~~~~~ 78 (309)
T 3u1t_A 17 EGATIAYVDEG--------SGQPVLFLHGNPTS--SYLWRNIIPYVVAAGYRAVAPDLIGM---GDSAKP-----DIEYR 78 (309)
T ss_dssp TTEEEEEEEEE--------CSSEEEEECCTTCC--GGGGTTTHHHHHHTTCEEEEECCTTS---TTSCCC-----SSCCC
T ss_pred CCeEEEEEEcC--------CCCEEEEECCCcch--hhhHHHHHHHHHhCCCEEEEEccCCC---CCCCCC-----CcccC
Confidence 56777655442 24789999997765 34677778887888999999999994 443221 11234
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhh-----------------hcC
Q 004149 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM-----------------VGT 659 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~-----------------~~~ 659 (771)
.+++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.+|....... ...
T Consensus 79 ~~~~~~~~~~~~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (309)
T 3u1t_A 79 LQDHVAYMDGFIDA--LGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRT 156 (309)
T ss_dssp HHHHHHHHHHHHHH--HTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHH--cCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHHhc
Confidence 55666555555554 23478999999999999999999999999999998875432100 000
Q ss_pred CCCC------cchhhhhccCCCCCcCCCCCChhhHHHHh-----------------hc--------------CccccccC
Q 004149 660 TDIP------DWCYVESYGSKGKDSFTESPSVEDLTRFH-----------------SK--------------SPISHISK 702 (771)
Q Consensus 660 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~--------------sp~~~~~~ 702 (771)
.... ...+...+.... ........+....+. .. +....+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 234 (309)
T 3u1t_A 157 ADVGEKMVLDGNFFVETILPEM--GVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMA 234 (309)
T ss_dssp TTHHHHHHTTTCHHHHTHHHHT--SCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHH
T ss_pred cchhhhhccccceehhhhcccc--cccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhhhccc
Confidence 0000 000000000000 000000011111110 00 11123567
Q ss_pred CCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHh
Q 004149 703 VKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 703 i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
+++|+|+++|++|..+|++.++.+.+.+.. .++++++++||.+.. +...++.+.|.+||++..
T Consensus 235 i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl~~~~ 297 (309)
T 3u1t_A 235 SPIPKLLFHAEPGALAPKPVVDYLSENVPN----LEVRFVGAGTHFLQE-DHPHLIGQGIADWLRRNK 297 (309)
T ss_dssp CCSCEEEEEEEECSSSCHHHHHHHHHHSTT----EEEEEEEEESSCHHH-HCHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEecCCCCCCCHHHHHHHHhhCCC----CEEEEecCCcccchh-hCHHHHHHHHHHHHHhcc
Confidence 899999999999999999888888777654 677788999997653 455688899999998764
No 140
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=99.74 E-value=7e-18 Score=171.19 Aligned_cols=217 Identities=14% Similarity=0.121 Sum_probs=132.3
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004149 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~-~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
.|+||++||.+.. ...|...+..|++ +||.|+++|+||.+ .+..... ...+++.+.+..+++.. .+.
T Consensus 21 ~~~vv~lhG~~~~--~~~~~~~~~~l~~~~g~~v~~~d~~G~G---~s~~~~~------~~~~~~~~~~~~~l~~~-~~~ 88 (272)
T 3fsg_A 21 GTPIIFLHGLSLD--KQSTCLFFEPLSNVGQYQRIYLDLPGMG---NSDPISP------STSDNVLETLIEAIEEI-IGA 88 (272)
T ss_dssp SSEEEEECCTTCC--HHHHHHHHTTSTTSTTSEEEEECCTTST---TCCCCSS------CSHHHHHHHHHHHHHHH-HTT
T ss_pred CCeEEEEeCCCCc--HHHHHHHHHHHhccCceEEEEecCCCCC---CCCCCCC------CCHHHHHHHHHHHHHHH-hCC
Confidence 4789999997654 3456666767766 79999999999944 3321111 23344333333333220 134
Q ss_pred CeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCC----CcC---CCCCChhhH
Q 004149 616 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK----DSF---TESPSVEDL 688 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~ 688 (771)
+++.|+|||+||.+++.++.++|++++++|+.+|.....................+..... ..+ .........
T Consensus 89 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (272)
T 3fsg_A 89 RRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFLSMNVIINNQAW 168 (272)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGHHHHHHHCSEESHHHH
T ss_pred CcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHHHHHHHHHHhccCCCchh
Confidence 7899999999999999999999999999999988753221111100000000000000000 000 000000000
Q ss_pred H-------------------HHhh-----cCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCC
Q 004149 689 T-------------------RFHS-----KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 744 (771)
Q Consensus 689 ~-------------------~~~~-----~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~ 744 (771)
. .+.. ..+...+.++++|+|+++|++|..+|++.+..+.+.+. +++++++++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~ 244 (272)
T 3fsg_A 169 HDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHNE----NGEIVLLNR 244 (272)
T ss_dssp HHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTTCSHHHHHHHTTCT----TEEEEEESS
T ss_pred HHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcCCHHHHHHHHHhcC----CCeEEEecC
Confidence 0 0000 00111347789999999999999999998888776653 489999999
Q ss_pred CCccCCCCCChHHHHHHHHHHHHHHh
Q 004149 745 DVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 745 ~~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
++|.+.. +...++.+.+.+||++..
T Consensus 245 ~gH~~~~-~~~~~~~~~i~~fl~~~~ 269 (272)
T 3fsg_A 245 TGHNLMI-DQREAVGFHFDLFLDELN 269 (272)
T ss_dssp CCSSHHH-HTHHHHHHHHHHHHHHHH
T ss_pred CCCCchh-cCHHHHHHHHHHHHHHhh
Confidence 9998764 345678889999998753
No 141
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=99.74 E-value=4.7e-18 Score=182.30 Aligned_cols=140 Identities=10% Similarity=0.031 Sum_probs=102.8
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC------------CCcch----HHHHHHHHCCcEEEEECCC
Q 004149 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS------------LSSYS----KSLAFLSSVGYSLLIVNYR 575 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~------------~~~~~----~~~~~la~~G~~V~~~d~r 575 (771)
.+...+|.++.++++.|++. .++.|+||++||.+.... ...|. ..+..|+++||+|+++|+|
T Consensus 91 ~~~~~~g~~l~~~l~~P~~~--~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~r 168 (391)
T 3g8y_A 91 EFYPFPKSVSTFLVLKPEHL--KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNA 168 (391)
T ss_dssp EECCSTTCCEEEEEEEETTC--CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCT
T ss_pred EEEcCCCCEEEEEEEeCCCC--CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCC
Confidence 44556788999999999742 567899999999654321 00112 5678999999999999999
Q ss_pred CCCCCChhhhhcC----------------CCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCC
Q 004149 576 GSLGFGEEALQSL----------------PGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD 639 (771)
Q Consensus 576 G~~~~g~~~~~~~----------------~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~ 639 (771)
|.++.+....... ...+....+.|+.+++++|.+++.+|++||+|+||||||++++.++.. ++
T Consensus 169 g~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~-~~ 247 (391)
T 3g8y_A 169 AAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVL-DK 247 (391)
T ss_dssp TSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHH-CT
T ss_pred CccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHc-CC
Confidence 9655432211000 001111223789999999999888999999999999999999998886 56
Q ss_pred ceeEEEecCCccchh
Q 004149 640 KFVAAAARNPLCNLA 654 (771)
Q Consensus 640 ~~~a~v~~~p~~~~~ 654 (771)
+++++|+.+++..+.
T Consensus 248 ~i~a~v~~~~~~~~~ 262 (391)
T 3g8y_A 248 DIYAFVYNDFLCQTQ 262 (391)
T ss_dssp TCCEEEEESCBCCHH
T ss_pred ceeEEEEccCCCCcc
Confidence 789999888877664
No 142
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=99.74 E-value=1.8e-17 Score=170.15 Aligned_cols=216 Identities=18% Similarity=0.245 Sum_probs=133.2
Q ss_pred CcEEEEEcCCC-CCCCCCcchHHH-HHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCC
Q 004149 537 DPLIVVLHGGP-HSVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 537 ~p~vv~~HGg~-~~~~~~~~~~~~-~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 614 (771)
.|+||++||.+ +......|...+ ..|++. |.|+++|+|| +|.+... .. ....++++.+.+..+++. ++
T Consensus 33 g~~vvllHG~~~~~~~~~~w~~~~~~~L~~~-~~vi~~D~~G---~G~S~~~---~~-~~~~~~~~a~dl~~~l~~--l~ 102 (286)
T 2puj_A 33 GETVIMLHGGGPGAGGWSNYYRNVGPFVDAG-YRVILKDSPG---FNKSDAV---VM-DEQRGLVNARAVKGLMDA--LD 102 (286)
T ss_dssp SSEEEEECCCSTTCCHHHHHTTTHHHHHHTT-CEEEEECCTT---STTSCCC---CC-SSCHHHHHHHHHHHHHHH--TT
T ss_pred CCcEEEECCCCCCCCcHHHHHHHHHHHHhcc-CEEEEECCCC---CCCCCCC---CC-cCcCHHHHHHHHHHHHHH--hC
Confidence 36899999964 222233566667 778765 9999999999 5544211 11 123455555555555554 24
Q ss_pred CCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCC------------CCcchhh----hhccCCCCCc
Q 004149 615 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD------------IPDWCYV----ESYGSKGKDS 678 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~------------~~~~~~~----~~~~~~~~~~ 678 (771)
.+++.|+||||||.+++.+|.++|++++++|+.+|............ .+.+... ..+... ...
T Consensus 103 ~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 181 (286)
T 2puj_A 103 IDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYD-QSL 181 (286)
T ss_dssp CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSC-GGG
T ss_pred CCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHHHHHHhcC-Ccc
Confidence 57899999999999999999999999999999987542100000000 0000000 000000 000
Q ss_pred CCC----------CCChhhHHHHh---------hcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEE
Q 004149 679 FTE----------SPSVEDLTRFH---------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKV 739 (771)
Q Consensus 679 ~~~----------~~~~~~~~~~~---------~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~ 739 (771)
... .........+. .......+.++++|+|+++|++|..+|++.++.+.+.+. ..++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~----~~~~ 257 (286)
T 2puj_A 182 ITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNID----DARL 257 (286)
T ss_dssp CCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSS----SEEE
T ss_pred CCHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccCHHHHHHHHHHCC----CCeE
Confidence 000 00000000000 112234567889999999999999999998888877664 3799
Q ss_pred EEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004149 740 IVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 740 ~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
++++++||.... +...++.+.+.+||++
T Consensus 258 ~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 258 HVFSKCGAWAQW-EHADEFNRLVIDFLRH 285 (286)
T ss_dssp EEESSCCSCHHH-HTHHHHHHHHHHHHHH
T ss_pred EEeCCCCCCccc-cCHHHHHHHHHHHHhc
Confidence 999999997653 3456788889999875
No 143
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=99.74 E-value=6.2e-17 Score=162.90 Aligned_cols=228 Identities=15% Similarity=0.179 Sum_probs=136.0
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcccc-
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ- 595 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~- 595 (771)
+|..+++....+ ..|.||++||.+... ...|...+..|+++||.|+++|+||. |.+... ...+...
T Consensus 10 ~g~~l~~~~~g~-------~~~~vvllHG~~~~~-~~~~~~~~~~l~~~g~~vi~~D~~G~---G~S~~~--~~~~~~~~ 76 (254)
T 2ocg_A 10 NGVQLHYQQTGE-------GDHAVLLLPGMLGSG-ETDFGPQLKNLNKKLFTVVAWDPRGY---GHSRPP--DRDFPADF 76 (254)
T ss_dssp TTEEEEEEEEEC-------CSEEEEEECCTTCCH-HHHCHHHHHHSCTTTEEEEEECCTTS---TTCCSS--CCCCCTTH
T ss_pred CCEEEEEEEecC-------CCCeEEEECCCCCCC-ccchHHHHHHHhhCCCeEEEECCCCC---CCCCCC--CCCCChHH
Confidence 466666544321 236799999965431 23577788888889999999999994 443211 1111111
Q ss_pred chhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhh-----hhcCCCCCcchhh--
Q 004149 596 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL-----MVGTTDIPDWCYV-- 668 (771)
Q Consensus 596 ~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~-----~~~~~~~~~~~~~-- 668 (771)
..+++.++++.+.+. +.+++.|+||||||.+++.+|.++|++++++|+.++...... .........|...
T Consensus 77 ~~~~~~~~~~~l~~l---~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (254)
T 2ocg_A 77 FERDAKDAVDLMKAL---KFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTR 153 (254)
T ss_dssp HHHHHHHHHHHHHHT---TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHTTSCGGGSCHHHH
T ss_pred HHHHHHHHHHHHHHh---CCCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHHHHHHHHHHHHHhH
Confidence 123334444444433 346899999999999999999999999999999887532110 0001111111000
Q ss_pred ----hhccCCCCCcCCCCCChhhHHHHhh----cCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEE
Q 004149 669 ----ESYGSKGKDSFTESPSVEDLTRFHS----KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVI 740 (771)
Q Consensus 669 ----~~~~~~~~~~~~~~~~~~~~~~~~~----~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~ 740 (771)
..++........ .........+.. ......+.++++|+|+++|++|.++|++.++.+.+.+.. .+++
T Consensus 154 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~----~~~~ 228 (254)
T 2ocg_A 154 KPLEALYGYDYFARTC-EKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKG----SRLH 228 (254)
T ss_dssp HHHHHHHCHHHHHHHH-HHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTT----CEEE
T ss_pred HHHHHHhcchhhHHHH-HHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhCCC----CEEE
Confidence 000000000000 000000000000 012335678999999999999999999988888776653 6899
Q ss_pred EeCCCCccCCCCCChHHHHHHHHHHH
Q 004149 741 VFPNDVHGIERPQSDFESFLNIGLWF 766 (771)
Q Consensus 741 ~~~~~~H~~~~~~~~~~~~~~i~~wl 766 (771)
+++++||.... +...++.+.+.+||
T Consensus 229 ~~~~~gH~~~~-e~p~~~~~~i~~fl 253 (254)
T 2ocg_A 229 LMPEGKHNLHL-RFADEFNKLAEDFL 253 (254)
T ss_dssp EETTCCTTHHH-HTHHHHHHHHHHHH
T ss_pred EcCCCCCchhh-hCHHHHHHHHHHHh
Confidence 99999998763 34556777888886
No 144
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=99.74 E-value=4e-18 Score=175.66 Aligned_cols=232 Identities=17% Similarity=0.166 Sum_probs=135.5
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|..+++..+.+ +.+.|.||++||+++.. ..|...+..+++.||.|+++|+||. |.+.... .....
T Consensus 13 ~g~~l~~~~~g~-----~~~~~~vvllHG~~~~~--~~~~~~~~~l~~~g~~vi~~D~~G~---G~S~~~~----~~~~~ 78 (293)
T 1mtz_A 13 NGIYIYYKLCKA-----PEEKAKLMTMHGGPGMS--HDYLLSLRDMTKEGITVLFYDQFGC---GRSEEPD----QSKFT 78 (293)
T ss_dssp TTEEEEEEEECC-----SSCSEEEEEECCTTTCC--SGGGGGGGGGGGGTEEEEEECCTTS---TTSCCCC----GGGCS
T ss_pred CCEEEEEEEECC-----CCCCCeEEEEeCCCCcc--hhHHHHHHHHHhcCcEEEEecCCCC---ccCCCCC----CCccc
Confidence 456665554432 11237899999976542 2333334455688999999999994 4432111 11123
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcC-----CCCCcc------
Q 004149 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT-----TDIPDW------ 665 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~-----~~~~~~------ 665 (771)
++++.+.+..+++.- .+.+++.|+||||||.+++.+|.++|++++++|+.+|.......... ...+..
T Consensus 79 ~~~~~~dl~~~~~~l-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (293)
T 1mtz_A 79 IDYGVEEAEALRSKL-FGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIK 157 (293)
T ss_dssp HHHHHHHHHHHHHHH-HTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-cCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHHHHHHHhcCHHHHHHHH
Confidence 444444444443331 02358999999999999999999999999999999987653211000 000000
Q ss_pred -----------hhh---hhccCCCCCcCCCCCChhhHHH---------H---------------hhcCccccccCCCCcE
Q 004149 666 -----------CYV---ESYGSKGKDSFTESPSVEDLTR---------F---------------HSKSPISHISKVKTPT 707 (771)
Q Consensus 666 -----------~~~---~~~~~~~~~~~~~~~~~~~~~~---------~---------------~~~sp~~~~~~i~~P~ 707 (771)
.+. ..+...........+. ..... + ...+....+.++++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 236 (293)
T 1mtz_A 158 KYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPP-EVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPT 236 (293)
T ss_dssp HHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCH-HHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCE
T ss_pred HhhccCCcChHHHHHHHHHHHHhhcccccCchH-HHHHhHhhhccchhhhhccCcceecccccccCCChhhhhccCCCCE
Confidence 000 0000000000000010 00000 0 0111223466789999
Q ss_pred EEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHh
Q 004149 708 IFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 708 Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
|+++|++| .+++..++.+.+.+. ++++++++++||..... ...++.+.+.+||+++|
T Consensus 237 lii~G~~D-~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~~l 293 (293)
T 1mtz_A 237 LITVGEYD-EVTPNVARVIHEKIA----GSELHVFRDCSHLTMWE-DREGYNKLLSDFILKHL 293 (293)
T ss_dssp EEEEETTC-SSCHHHHHHHHHHST----TCEEEEETTCCSCHHHH-SHHHHHHHHHHHHHTCC
T ss_pred EEEeeCCC-CCCHHHHHHHHHhCC----CceEEEeCCCCCCcccc-CHHHHHHHHHHHHHhcC
Confidence 99999999 677777777766654 37899999999986533 45678899999998764
No 145
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=99.74 E-value=1.6e-17 Score=172.34 Aligned_cols=227 Identities=17% Similarity=0.173 Sum_probs=139.5
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
++..++++...+ +..|+||++||++.. ...|...+..|++ ||.|+++|+||.+ |.+... .....
T Consensus 53 ~~~~~~~~~~g~------~~~~~vv~lHG~~~~--~~~~~~~~~~L~~-g~~vi~~D~~G~g--G~s~~~-----~~~~~ 116 (306)
T 2r11_A 53 RFGQTHVIASGP------EDAPPLVLLHGALFS--STMWYPNIADWSS-KYRTYAVDIIGDK--NKSIPE-----NVSGT 116 (306)
T ss_dssp TTEEEEEEEESC------TTSCEEEEECCTTTC--GGGGTTTHHHHHH-HSEEEEECCTTSS--SSCEEC-----SCCCC
T ss_pred CCceEEEEeeCC------CCCCeEEEECCCCCC--HHHHHHHHHHHhc-CCEEEEecCCCCC--CCCCCC-----CCCCC
Confidence 445666555432 245889999997765 3457777788877 9999999999952 222110 11234
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhc------CCCC-Ccc--hh
Q 004149 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG------TTDI-PDW--CY 667 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~------~~~~-~~~--~~ 667 (771)
.+++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.+|......... .... ..+ .+
T Consensus 117 ~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (306)
T 2r11_A 117 RTDYANWLLDVFDN--LGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTASNGVETF 194 (306)
T ss_dssp HHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHTTTSTTHHHHH
T ss_pred HHHHHHHHHHHHHh--cCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhHHHHHHHHHHH
Confidence 55666666655554 2457899999999999999999999999999999999765311000 0000 000 00
Q ss_pred hhhccCCC-----------------CCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHH
Q 004149 668 VESYGSKG-----------------KDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARAL 730 (771)
Q Consensus 668 ~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l 730 (771)
...+.... ...+..... .............+.++++|+|+++|++|..+|++.+.++++.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~ 272 (306)
T 2r11_A 195 LNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNP--NADGFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSF 272 (306)
T ss_dssp HHHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCC--CTTSSSCBCCHHHHHTCCSCEEEEEETTCCSSCHHHHHHHHHHH
T ss_pred HHHhhCCccccccccccccHHHHHHHHhhhhhhh--hccCCCCCCCHHHHhcCCCCEEEEEeCCCcccCHHHHHHHHHHH
Confidence 00000000 000000000 00000011223346788999999999999999988877665543
Q ss_pred HhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004149 731 REKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 731 ~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 767 (771)
. .+++++++++++|.+.. +...++.+.|.+||+
T Consensus 273 ~---~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~ 305 (306)
T 2r11_A 273 V---PDIEAEVIKNAGHVLSM-EQPTYVNERVMRFFN 305 (306)
T ss_dssp S---TTCEEEEETTCCTTHHH-HSHHHHHHHHHHHHC
T ss_pred C---CCCEEEEeCCCCCCCcc-cCHHHHHHHHHHHHh
Confidence 2 34799999999997653 334577788888875
No 146
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=99.74 E-value=9.8e-18 Score=170.13 Aligned_cols=229 Identities=15% Similarity=0.186 Sum_probs=141.3
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|..+++..+.|. +.+.|+||++||.+.. ...|...+..|++ +|.|+++|+|| +|.+.... ....
T Consensus 10 ~g~~l~y~~~g~~----~~~~~~vvllHG~~~~--~~~~~~~~~~L~~-~~~vi~~D~~G---~G~S~~~~-----~~~~ 74 (266)
T 2xua_A 10 NGTELHYRIDGER----HGNAPWIVLSNSLGTD--LSMWAPQVAALSK-HFRVLRYDTRG---HGHSEAPK-----GPYT 74 (266)
T ss_dssp SSSEEEEEEESCS----SSCCCEEEEECCTTCC--GGGGGGGHHHHHT-TSEEEEECCTT---STTSCCCS-----SCCC
T ss_pred CCEEEEEEEcCCc----cCCCCeEEEecCccCC--HHHHHHHHHHHhc-CeEEEEecCCC---CCCCCCCC-----CCCC
Confidence 5677877766442 1125889999996654 4467777888865 59999999999 45443211 1223
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhh---hhc------CCCCCcc--
Q 004149 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL---MVG------TTDIPDW-- 665 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~---~~~------~~~~~~~-- 665 (771)
++++.+.+..+++. +..+++.|+||||||.+++.+|.++|++++++|+.++...... +.. .......
T Consensus 75 ~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (266)
T 2xua_A 75 IEQLTGDVLGLMDT--LKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKARTEGMHALAD 152 (266)
T ss_dssp HHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHh--cCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHHHHHHhcChHHHHH
Confidence 45555555444444 2346899999999999999999999999999999887542100 000 0000000
Q ss_pred hhhhhccCCC--------CCcC---CCCCChhh----HHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHH
Q 004149 666 CYVESYGSKG--------KDSF---TESPSVED----LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARAL 730 (771)
Q Consensus 666 ~~~~~~~~~~--------~~~~---~~~~~~~~----~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l 730 (771)
.....+.... ...+ ........ ...+...+....+.++++|+|+++|++|..+|++.++.+.+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~ 232 (266)
T 2xua_A 153 AVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQAI 232 (266)
T ss_dssp HHHHHHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHS
T ss_pred HHHHHHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCCHHHHHHHHHhC
Confidence 0000000000 0000 00000000 0111122334457789999999999999999998888887776
Q ss_pred HhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004149 731 REKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 731 ~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
.. .++++++ +||.... +...++.+.+.+||++
T Consensus 233 ~~----~~~~~~~-~gH~~~~-e~p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 233 AG----ARYVELD-ASHISNI-ERADAFTKTVVDFLTE 264 (266)
T ss_dssp TT----CEEEEES-CCSSHHH-HTHHHHHHHHHHHHTC
T ss_pred CC----CEEEEec-CCCCchh-cCHHHHHHHHHHHHHh
Confidence 54 6899999 9998653 3355788889999863
No 147
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=99.74 E-value=1.4e-17 Score=178.07 Aligned_cols=246 Identities=13% Similarity=0.115 Sum_probs=147.9
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC----------C-cchHHH---HHHHHCCcEEEEECCCCCCC-----
Q 004149 519 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL----------S-SYSKSL---AFLSSVGYSLLIVNYRGSLG----- 579 (771)
Q Consensus 519 ~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~----------~-~~~~~~---~~la~~G~~V~~~d~rG~~~----- 579 (771)
.+|++..+-+. ...+.|+||++||.+.+... . .|...+ ..|...||.|+++|+||.|.
T Consensus 27 ~~i~y~~~g~~---~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~G~~ 103 (377)
T 3i1i_A 27 VQMGYETYGTL---NRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVKNPH 103 (377)
T ss_dssp EEEEEEEESCC---CTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTTSTT
T ss_pred eeEEEEeeccc---CCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecccccccccCCC
Confidence 44555555433 23456899999997765322 0 134344 46667899999999997532
Q ss_pred ---CChhhhhcCCCC-----ccccchhhHHHHHHHHHHcCCCCCCeEE-EEEcChhHHHHHHHHHhCCCceeEEEe-cCC
Q 004149 580 ---FGEEALQSLPGK-----VGSQDVNDVLTAIDHVIDMGLANPSKVT-VVGGSHGGFLTTHLIGQAPDKFVAAAA-RNP 649 (771)
Q Consensus 580 ---~g~~~~~~~~~~-----~~~~~~~D~~~~i~~l~~~~~~d~~ri~-l~G~S~GG~~a~~~a~~~p~~~~a~v~-~~p 649 (771)
+|.+......+. +....++++.+.+..+++. ++.+++. |+||||||.+++.+|.++|++++++|+ .++
T Consensus 104 ~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~--l~~~~~~ilvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 181 (377)
T 3i1i_A 104 VITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKD--MGIARLHAVMGPSAGGMIAQQWAVHYPHMVERMIGVITN 181 (377)
T ss_dssp CCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHH--TTCCCBSEEEEETHHHHHHHHHHHHCTTTBSEEEEESCC
T ss_pred cccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHH--cCCCcEeeEEeeCHhHHHHHHHHHHChHHHHHhcccCcC
Confidence 111110000000 1133567777777777765 3456786 999999999999999999999999999 665
Q ss_pred ccchhhh-hc--------CCCCCcch-----------------------------hhhhccCCCCCc-----C-------
Q 004149 650 LCNLALM-VG--------TTDIPDWC-----------------------------YVESYGSKGKDS-----F------- 679 (771)
Q Consensus 650 ~~~~~~~-~~--------~~~~~~~~-----------------------------~~~~~~~~~~~~-----~------- 679 (771)
....... .. ....+.|. +...+....... +
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (377)
T 3i1i_A 182 PQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEPYEKVSSLTSFE 261 (377)
T ss_dssp SBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGGGTCTTCCCHHH
T ss_pred CCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhccccccccccchhHHH
Confidence 5431000 00 00000000 000010000000 0
Q ss_pred ----------CCCCChhhH----HHHhhcC-------ccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEE
Q 004149 680 ----------TESPSVEDL----TRFHSKS-------PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 738 (771)
Q Consensus 680 ----------~~~~~~~~~----~~~~~~s-------p~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~ 738 (771)
......... ..+...+ ....+.++++|+|+++|++|.++|++.++.+++.+++.+.+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~g~~~~ 341 (377)
T 3i1i_A 262 KEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMVDLLQKQGKYAE 341 (377)
T ss_dssp HHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHHHHHHHHHhcCCCce
Confidence 000000000 0000011 1234678899999999999999999999999999988777899
Q ss_pred EEEeCC-CCccCCCCCChHHHHHHHHHHHHHHh
Q 004149 739 VIVFPN-DVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 739 ~~~~~~-~~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
++++++ +||...... ..++.+.|.+||++++
T Consensus 342 ~~~i~~~~gH~~~~e~-p~~~~~~i~~fl~~~~ 373 (377)
T 3i1i_A 342 VYEIESINGHMAGVFD-IHLFEKKVYEFLNRKV 373 (377)
T ss_dssp ECCBCCTTGGGHHHHC-GGGTHHHHHHHHHSCC
T ss_pred EEEcCCCCCCcchhcC-HHHHHHHHHHHHHhhh
Confidence 999998 999765333 3578889999998765
No 148
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=99.74 E-value=3.2e-17 Score=172.00 Aligned_cols=236 Identities=17% Similarity=0.257 Sum_probs=137.7
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCCCcccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 595 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~-~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~ 595 (771)
+|.++++....|.. +..+.+.||++||++.. ...|...+..|++ .||.|+++|+|| +|.+.... .......
T Consensus 36 ~g~~l~y~~~G~~~--~~~~g~plvllHG~~~~--~~~w~~~~~~l~~~~~~~Via~D~rG---~G~S~~~~-~~~~~~~ 107 (330)
T 3nwo_A 36 GDHETWVQVTTPEN--AQPHALPLIVLHGGPGM--AHNYVANIAALADETGRTVIHYDQVG---CGNSTHLP-DAPADFW 107 (330)
T ss_dssp TTEEEEEEEECCSS--CCTTCCCEEEECCTTTC--CSGGGGGGGGHHHHHTCCEEEECCTT---STTSCCCT-TSCGGGC
T ss_pred cCcEEEEEEecCcc--CCCCCCcEEEECCCCCC--chhHHHHHHHhccccCcEEEEECCCC---CCCCCCCC-CCccccc
Confidence 57778877776531 11112358899997765 3456666677765 699999999999 44442100 0011112
Q ss_pred chhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhh------------------
Q 004149 596 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV------------------ 657 (771)
Q Consensus 596 ~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~------------------ 657 (771)
..+++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.++........
T Consensus 108 ~~~~~a~dl~~ll~~--lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (330)
T 3nwo_A 108 TPQLFVDEFHAVCTA--LGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDLRAQLPAETRAAL 185 (330)
T ss_dssp CHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred cHHHHHHHHHHHHHH--cCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHHHHHHHHHhcCHHHHHHH
Confidence 233333333333333 134689999999999999999999999999999888754321100
Q ss_pred ------cCCCCCcchh-hhhccCCCCCcCCCCCChhhHHH-------------------------HhhcCccccccCCCC
Q 004149 658 ------GTTDIPDWCY-VESYGSKGKDSFTESPSVEDLTR-------------------------FHSKSPISHISKVKT 705 (771)
Q Consensus 658 ------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~sp~~~~~~i~~ 705 (771)
.....+.+.. ...+...........+ ...... +...+....+.+|++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 264 (330)
T 3nwo_A 186 DRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTP-QDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLPDVTA 264 (330)
T ss_dssp HHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCC-HHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGGGGCBCGGGGGGCCS
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHhhccccCCC-HHHHHHHHhhccchhhhhcccCchhhhhhccccCCchhhhcccCCC
Confidence 0000000000 0000000000000000 000000 011122345678899
Q ss_pred cEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHH
Q 004149 706 PTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 706 P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 769 (771)
|+|+++|++|..+| ..+..+.+.+. ..++++++++||.... +...++.+.+.+||+++
T Consensus 265 P~Lvi~G~~D~~~p-~~~~~~~~~ip----~~~~~~i~~~gH~~~~-e~p~~~~~~i~~FL~~~ 322 (330)
T 3nwo_A 265 PVLVIAGEHDEATP-KTWQPFVDHIP----DVRSHVFPGTSHCTHL-EKPEEFRAVVAQFLHQH 322 (330)
T ss_dssp CEEEEEETTCSSCH-HHHHHHHHHCS----SEEEEEETTCCTTHHH-HSHHHHHHHHHHHHHHH
T ss_pred CeEEEeeCCCccCh-HHHHHHHHhCC----CCcEEEeCCCCCchhh-cCHHHHHHHHHHHHHhc
Confidence 99999999999875 45555555443 4899999999997664 34568889999999875
No 149
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=99.74 E-value=2.3e-17 Score=168.48 Aligned_cols=210 Identities=17% Similarity=0.147 Sum_probs=136.1
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
..+|..+++..+.|+ +.|+||++||.+.. ...|...+..|+++||.|+++|+||.+..... .....
T Consensus 10 ~~~g~~l~~~~~g~~------~~~~vv~~hG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~------~~~~~ 75 (286)
T 3qit_A 10 EFGGNQICLCSWGSP------EHPVVLCIHGILEQ--GLAWQEVALPLAAQGYRVVAPDLFGHGRSSHL------EMVTS 75 (286)
T ss_dssp EETTEEEEEEEESCT------TSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC------SSGGG
T ss_pred ecCCceEEEeecCCC------CCCEEEEECCCCcc--cchHHHHHHHhhhcCeEEEEECCCCCCCCCCC------CCCCC
Confidence 346788888777543 35889999997765 44688889999999999999999995443211 11123
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhh---------------c-
Q 004149 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV---------------G- 658 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~---------------~- 658 (771)
...+++.+.+..+++. ++.+++.++|||+||.+++.++.++|++++++|+.+|........ .
T Consensus 76 ~~~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (286)
T 3qit_A 76 YSSLTFLAQIDRVIQE--LPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSS 153 (286)
T ss_dssp CSHHHHHHHHHHHHHH--SCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHh--cCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhHHHHHHHHHHhc
Confidence 3456666666666665 345789999999999999999999999999999999875432110 0
Q ss_pred CCC---CCcchhh-hhccCCCCCcCCCCCChhhHHHH---------------------------------hhcCcccccc
Q 004149 659 TTD---IPDWCYV-ESYGSKGKDSFTESPSVEDLTRF---------------------------------HSKSPISHIS 701 (771)
Q Consensus 659 ~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~sp~~~~~ 701 (771)
... ....... .... ... ..........+ ...+....+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T 3qit_A 154 TPQHPIFPDVATAASRLR----QAI-PSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLK 228 (286)
T ss_dssp CCCCCCBSSHHHHHHHHH----HHS-TTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHHH
T ss_pred cccccccccHHHHHHHhh----cCC-cccCHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHHHHHHh
Confidence 000 0000000 0000 000 00000000000 1111223456
Q ss_pred CCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCC
Q 004149 702 KVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE 750 (771)
Q Consensus 702 ~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 750 (771)
++++|+|+++|++|..+|++....+.+.+.. ++++++++ ||.+.
T Consensus 229 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~g-gH~~~ 272 (286)
T 3qit_A 229 SIQVPTTLVYGDSSKLNRPEDLQQQKMTMTQ----AKRVFLSG-GHNLH 272 (286)
T ss_dssp HCCSCEEEEEETTCCSSCHHHHHHHHHHSTT----SEEEEESS-SSCHH
T ss_pred ccCCCeEEEEeCCCcccCHHHHHHHHHHCCC----CeEEEeeC-CchHh
Confidence 7899999999999999999988887776643 68999999 99765
No 150
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=99.74 E-value=6.3e-18 Score=172.08 Aligned_cols=214 Identities=13% Similarity=0.139 Sum_probs=134.0
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCC
Q 004149 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 616 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 616 (771)
.|+||++||++... ..|...+..|++ ||.|+++|+||.+. +.. .........+++.+.+..+++. ++.+
T Consensus 23 ~~~vv~~HG~~~~~--~~~~~~~~~L~~-~~~vi~~d~~G~G~---s~~---~~~~~~~~~~~~~~~~~~~~~~--l~~~ 91 (278)
T 3oos_A 23 GPPLCVTHLYSEYN--DNGNTFANPFTD-HYSVYLVNLKGCGN---SDS---AKNDSEYSMTETIKDLEAIREA--LYIN 91 (278)
T ss_dssp SSEEEECCSSEECC--TTCCTTTGGGGG-TSEEEEECCTTSTT---SCC---CSSGGGGSHHHHHHHHHHHHHH--TTCS
T ss_pred CCeEEEEcCCCcch--HHHHHHHHHhhc-CceEEEEcCCCCCC---CCC---CCCcccCcHHHHHHHHHHHHHH--hCCC
Confidence 47899999977653 346666777776 99999999999544 321 1111223466666666666665 2456
Q ss_pred eEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCC-----Ccch----hhhhccCC-------------
Q 004149 617 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDI-----PDWC----YVESYGSK------------- 674 (771)
Q Consensus 617 ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~-----~~~~----~~~~~~~~------------- 674 (771)
++.|+|||+||.+++.++.++|++++++|+.+|............. .... ....+...
T Consensus 92 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (278)
T 3oos_A 92 KWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQEERKALSRE 171 (278)
T ss_dssp CEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHHHHHTCTTSCHHHHHHHHHH
T ss_pred eEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHHHhhcccccCchHHHHHHHH
Confidence 8999999999999999999999999999999998762111100000 0000 00000000
Q ss_pred ----------CCCcCCCCC-----ChhhHHHHh-----hcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCC
Q 004149 675 ----------GKDSFTESP-----SVEDLTRFH-----SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG 734 (771)
Q Consensus 675 ----------~~~~~~~~~-----~~~~~~~~~-----~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g 734 (771)
....+...+ .......+. ..+....+.++++|+|+++|++|..+|++.++.+.+.+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--- 248 (278)
T 3oos_A 172 WALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIP--- 248 (278)
T ss_dssp HHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHST---
T ss_pred HhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEEEEEeccCCCCCHHHHHHHHhhCC---
Confidence 000000000 001111111 223344567899999999999999999998888888764
Q ss_pred CCEEEEEeCCCCccCCCCCChHHHHHHHHHHH
Q 004149 735 VETKVIVFPNDVHGIERPQSDFESFLNIGLWF 766 (771)
Q Consensus 735 ~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl 766 (771)
++++++++++||.+.. +...++.+.+.+||
T Consensus 249 -~~~~~~~~~~gH~~~~-~~p~~~~~~i~~fl 278 (278)
T 3oos_A 249 -NATLTKFEESNHNPFV-EEIDKFNQFVNDTL 278 (278)
T ss_dssp -TEEEEEETTCSSCHHH-HSHHHHHHHHHHTC
T ss_pred -CcEEEEcCCcCCCccc-ccHHHHHHHHHhhC
Confidence 3899999999998653 23445555565553
No 151
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=99.73 E-value=1.5e-17 Score=170.35 Aligned_cols=227 Identities=16% Similarity=0.193 Sum_probs=137.4
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 595 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~-~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~ 595 (771)
+|..+++... + ..|.||++||.+... ....|...+..| +.+|.|+++|+|| +|.+.... . ...
T Consensus 13 ~g~~l~y~~~------G--~g~~vvllHG~~~~~~~~~~w~~~~~~L-~~~~~vi~~Dl~G---~G~S~~~~---~-~~~ 76 (282)
T 1iup_A 13 AGVLTNYHDV------G--EGQPVILIHGSGPGVSAYANWRLTIPAL-SKFYRVIAPDMVG---FGFTDRPE---N-YNY 76 (282)
T ss_dssp TTEEEEEEEE------C--CSSEEEEECCCCTTCCHHHHHTTTHHHH-TTTSEEEEECCTT---STTSCCCT---T-CCC
T ss_pred CCEEEEEEec------C--CCCeEEEECCCCCCccHHHHHHHHHHhh-ccCCEEEEECCCC---CCCCCCCC---C-CCC
Confidence 4666665433 1 236799999954321 112455566667 6789999999999 45442111 0 122
Q ss_pred chhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchh-------hhhcCCCCCcchhh
Q 004149 596 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA-------LMVGTTDIPDWCYV 668 (771)
Q Consensus 596 ~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~-------~~~~~~~~~~~~~~ 668 (771)
.++++.+.+..+++. .+.+++.|+||||||.+++.+|.++|++++++|+.+|..... ..... .+.....
T Consensus 77 ~~~~~a~dl~~~l~~--l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 152 (282)
T 1iup_A 77 SKDSWVDHIIGIMDA--LEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGY--TPSIENM 152 (282)
T ss_dssp CHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHHHHHTC--CSCHHHH
T ss_pred CHHHHHHHHHHHHHH--hCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHHHHhcC--CCcHHHH
Confidence 355555555555554 234689999999999999999999999999999998754210 00000 0000000
Q ss_pred ----hhccCCC--C-----C-cC--CCCCCh-hhHHHHhh----------cCccccccCCCCcEEEEeeCCCCccCcHHH
Q 004149 669 ----ESYGSKG--K-----D-SF--TESPSV-EDLTRFHS----------KSPISHISKVKTPTIFLLGAQDLRVPVSNG 723 (771)
Q Consensus 669 ----~~~~~~~--~-----~-~~--~~~~~~-~~~~~~~~----------~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~ 723 (771)
..+.... . . .+ ...+.. .....+.. ......+.++++|+|+++|++|..+|++.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~ 232 (282)
T 1iup_A 153 RNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSS 232 (282)
T ss_dssp HHHHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHH
T ss_pred HHHHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEecCCCCCCCHHHH
Confidence 0000000 0 0 00 000000 00000000 001145678999999999999999999988
Q ss_pred HHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004149 724 LQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 724 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
+++.+.+.. .++++++++||.... +...++.+.+.+||++
T Consensus 233 ~~~~~~~~~----~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 272 (282)
T 1iup_A 233 LRLGELIDR----AQLHVFGRCGHWTQI-EQTDRFNRLVVEFFNE 272 (282)
T ss_dssp HHHHHHCTT----EEEEEESSCCSCHHH-HSHHHHHHHHHHHHHT
T ss_pred HHHHHhCCC----CeEEEECCCCCCccc-cCHHHHHHHHHHHHhc
Confidence 887776643 799999999998653 3456788899999975
No 152
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=99.73 E-value=2.3e-17 Score=168.31 Aligned_cols=219 Identities=11% Similarity=0.082 Sum_probs=138.7
Q ss_pred cEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCe
Q 004149 538 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 617 (771)
Q Consensus 538 p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 617 (771)
|+||++||.+.. ...|...+..|++ ||.|+++|+||.+.+... ... .......+++.+.+..+++.. +.++
T Consensus 29 ~~vv~lHG~~~~--~~~~~~~~~~l~~-g~~v~~~d~~G~G~s~~~---~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~ 99 (282)
T 3qvm_A 29 KTVLLAHGFGCD--QNMWRFMLPELEK-QFTVIVFDYVGSGQSDLE---SFS-TKRYSSLEGYAKDVEEILVAL--DLVN 99 (282)
T ss_dssp CEEEEECCTTCC--GGGGTTTHHHHHT-TSEEEECCCTTSTTSCGG---GCC-TTGGGSHHHHHHHHHHHHHHT--TCCS
T ss_pred CeEEEECCCCCC--cchHHHHHHHHhc-CceEEEEecCCCCCCCCC---CCC-ccccccHHHHHHHHHHHHHHc--CCCc
Confidence 899999997655 3467777888877 999999999995543322 110 011124556665565555552 4578
Q ss_pred EEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcC--CCCCc--ch-hhhhccC-------CCCCc-CCCCCC
Q 004149 618 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT--TDIPD--WC-YVESYGS-------KGKDS-FTESPS 684 (771)
Q Consensus 618 i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~--~~~~~--~~-~~~~~~~-------~~~~~-~~~~~~ 684 (771)
++|+|||+||.+++.++.++|++++++|+.+|.......... ..... .. ....... ..... +.....
T Consensus 100 ~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (282)
T 3qvm_A 100 VSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASHS 179 (282)
T ss_dssp EEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCTTSC
T ss_pred eEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhccCCccc
Confidence 999999999999999999999999999999986532211000 00000 00 0000000 00000 000000
Q ss_pred hh-------------------hHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCC
Q 004149 685 VE-------------------DLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPND 745 (771)
Q Consensus 685 ~~-------------------~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~ 745 (771)
.. ........+....+.++++|+|+++|++|..+|++.+..+.+.+. ..++++++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~ 255 (282)
T 3qvm_A 180 SELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIP----NSQLELIQAE 255 (282)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHHHHSS----SEEEEEEEEE
T ss_pred hhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHHHhCC----CCcEEEecCC
Confidence 00 001111223335577889999999999999999998888877764 3799999999
Q ss_pred CccCCCCCChHHHHHHHHHHHHHHh
Q 004149 746 VHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 746 ~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
+|.+.. +...++.+.+.+||++..
T Consensus 256 gH~~~~-~~~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 256 GHCLHM-TDAGLITPLLIHFIQNNQ 279 (282)
T ss_dssp SSCHHH-HCHHHHHHHHHHHHHHC-
T ss_pred CCcccc-cCHHHHHHHHHHHHHhcC
Confidence 998654 345678899999998753
No 153
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=99.73 E-value=3.7e-17 Score=167.68 Aligned_cols=232 Identities=16% Similarity=0.164 Sum_probs=136.9
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCC-CCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004149 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGP-HSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~-~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
.+|..+++...-+ ...|+||++||.+ +......|...+..|++. |.|+++|+|| +|.+..... ..
T Consensus 14 ~~g~~l~y~~~g~------~g~p~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~D~~G---~G~S~~~~~----~~ 79 (285)
T 1c4x_A 14 SGTLASHALVAGD------PQSPAVVLLHGAGPGAHAASNWRPIIPDLAEN-FFVVAPDLIG---FGQSEYPET----YP 79 (285)
T ss_dssp CTTSCEEEEEESC------TTSCEEEEECCCSTTCCHHHHHGGGHHHHHTT-SEEEEECCTT---STTSCCCSS----CC
T ss_pred ECCEEEEEEecCC------CCCCEEEEEeCCCCCCcchhhHHHHHHHHhhC-cEEEEecCCC---CCCCCCCCC----cc
Confidence 3566676544321 1346799999964 222233566667777665 9999999999 444421110 01
Q ss_pred cchhhH----HHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchh--------hhhcCCCC
Q 004149 595 QDVNDV----LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA--------LMVGTTDI 662 (771)
Q Consensus 595 ~~~~D~----~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~--------~~~~~~~~ 662 (771)
..++++ .+.+..+++. .+.+++.|+||||||.+++.++.++|++++++|+.+|..... ........
T Consensus 80 ~~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 157 (285)
T 1c4x_A 80 GHIMSWVGMRVEQILGLMNH--FGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYAD 157 (285)
T ss_dssp SSHHHHHHHHHHHHHHHHHH--HTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGS
T ss_pred cchhhhhhhHHHHHHHHHHH--hCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHHHhcc
Confidence 234444 4444444443 234689999999999999999999999999999998754210 00000000
Q ss_pred CcchhhhhccCCCCCcCCCC--C------------ChhhHHHHhh------------cCccccccCCCCcEEEEeeCCCC
Q 004149 663 PDWCYVESYGSKGKDSFTES--P------------SVEDLTRFHS------------KSPISHISKVKTPTIFLLGAQDL 716 (771)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~--~------------~~~~~~~~~~------------~sp~~~~~~i~~P~Lii~G~~D~ 716 (771)
+.......+........... . .......+.. ......+.++++|+|+++|++|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 237 (285)
T 1c4x_A 158 PRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDR 237 (285)
T ss_dssp CCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCS
T ss_pred ccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEEEeCCCe
Confidence 00000000000000000000 0 0000000000 01223467889999999999999
Q ss_pred ccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004149 717 RVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 717 ~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
.+|++.++.+++.+. +.++++++++||.... +...++.+.+.+||++
T Consensus 238 ~~p~~~~~~~~~~~~----~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 238 IVPLDTSLYLTKHLK----HAELVVLDRCGHWAQL-ERWDAMGPMLMEHFRA 284 (285)
T ss_dssp SSCTHHHHHHHHHCS----SEEEEEESSCCSCHHH-HSHHHHHHHHHHHHHC
T ss_pred eeCHHHHHHHHHhCC----CceEEEeCCCCcchhh-cCHHHHHHHHHHHHhc
Confidence 999998888777654 4799999999998653 3456788889999864
No 154
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=99.73 E-value=2.3e-17 Score=167.08 Aligned_cols=220 Identities=11% Similarity=0.040 Sum_probs=137.4
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004149 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
..|+||++||.+.. ...|...+..|++ ||.|+++|+||.+.+... ... ......++++.+.+..+++. ++.
T Consensus 19 ~~p~vv~~HG~~~~--~~~~~~~~~~l~~-g~~v~~~D~~G~G~S~~~---~~~-~~~~~~~~~~~~~~~~~~~~--~~~ 89 (269)
T 4dnp_A 19 GERVLVLAHGFGTD--QSAWNRILPFFLR-DYRVVLYDLVCAGSVNPD---FFD-FRRYTTLDPYVDDLLHILDA--LGI 89 (269)
T ss_dssp CSSEEEEECCTTCC--GGGGTTTGGGGTT-TCEEEEECCTTSTTSCGG---GCC-TTTCSSSHHHHHHHHHHHHH--TTC
T ss_pred CCCEEEEEeCCCCc--HHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCC---CCC-ccccCcHHHHHHHHHHHHHh--cCC
Confidence 45899999997655 3466677778877 999999999995443221 111 11112455555555555554 245
Q ss_pred CeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcc----hhhhhccCC-------CCCcCCCCCC
Q 004149 616 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDW----CYVESYGSK-------GKDSFTESPS 684 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~----~~~~~~~~~-------~~~~~~~~~~ 684 (771)
+++.|+|||+||.+++.++.++|++++++|+.+|................ ......... ..........
T Consensus 90 ~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (269)
T 4dnp_A 90 DCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGADV 169 (269)
T ss_dssp CSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCSSC
T ss_pred CeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhhhhccCCC
Confidence 68999999999999999999999999999999986432110000000000 000000000 0000000000
Q ss_pred hh-------------------hHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCC
Q 004149 685 VE-------------------DLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPND 745 (771)
Q Consensus 685 ~~-------------------~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~ 745 (771)
.. ....+...+....+.++++|+|+++|++|..+|++.++.+.+.+.. .+++++++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 246 (269)
T 4dnp_A 170 PAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGG---KNTVHWLNIE 246 (269)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHHHHSSS---CEEEEEEEEE
T ss_pred hhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHHHHhCCC---CceEEEeCCC
Confidence 00 0111122344456778899999999999999999998888777643 2799999999
Q ss_pred CccCCCCCChHHHHHHHHHHHHH
Q 004149 746 VHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 746 ~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
+|.+.. +...++.+.+.+||++
T Consensus 247 gH~~~~-~~p~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 247 GHLPHL-SAPTLLAQELRRALSH 268 (269)
T ss_dssp SSCHHH-HCHHHHHHHHHHHHC-
T ss_pred CCCccc-cCHHHHHHHHHHHHhh
Confidence 998653 3456778888888865
No 155
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=99.73 E-value=2.5e-17 Score=158.36 Aligned_cols=181 Identities=15% Similarity=0.073 Sum_probs=124.1
Q ss_pred CCcEEEEEcCCCCCCC-CCcchH-HHHHHHHC-CcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCC
Q 004149 536 CDPLIVVLHGGPHSVS-LSSYSK-SLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 612 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~-~~~~~~-~~~~la~~-G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 612 (771)
+.|+||++||++.... ...|.. .+..|+++ ||.|+++|+||... .++...++.+.+...
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~------------------~~~~~~~~~~~~~l~ 64 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT------------------ARESIWLPFMETELH 64 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTT------------------CCHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCc------------------ccHHHHHHHHHHHhC
Confidence 4689999999776532 234555 67788777 99999999998311 123344455555422
Q ss_pred CCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHh
Q 004149 613 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFH 692 (771)
Q Consensus 613 ~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (771)
. .+++.|+|||+||.+++.++.++| ++++|+.+|...... .. ..... ..+. .+.
T Consensus 65 ~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~--------~~--~~~~~----~~~~-~~~-------- 118 (194)
T 2qs9_A 65 C-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLG--------DE--NERAS----GYFT-RPW-------- 118 (194)
T ss_dssp C-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTT--------CH--HHHHT----STTS-SCC--------
T ss_pred c-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccc--------hh--hhHHH----hhhc-ccc--------
Confidence 2 278999999999999999999998 999999988753210 00 00000 0000 010
Q ss_pred hcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHh
Q 004149 693 SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 693 ~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
....+..+.+|+|+++|++|..+|++.++.+.+.+ . .++.++++++|.+.. +. .+.+..+++||++..
T Consensus 119 ---~~~~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~-~----~~~~~~~~~gH~~~~-~~-p~~~~~~~~fl~~~~ 186 (194)
T 2qs9_A 119 ---QWEKIKANCPYIVQFGSTDDPFLPWKEQQEVADRL-E----TKLHKFTDCGHFQNT-EF-HELITVVKSLLKVPA 186 (194)
T ss_dssp ---CHHHHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH-T----CEEEEESSCTTSCSS-CC-HHHHHHHHHHHTCCC
T ss_pred ---cHHHHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc-C----CeEEEeCCCCCccch-hC-HHHHHHHHHHHHhhh
Confidence 11123345679999999999999999999998888 3 589999999998763 33 356677789997643
No 156
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=99.73 E-value=7.7e-18 Score=171.52 Aligned_cols=217 Identities=15% Similarity=0.112 Sum_probs=141.6
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHH-HHHCC---cEEEEECCCCCCCCChhhh--hcCCC
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAF-LSSVG---YSLLIVNYRGSLGFGEEAL--QSLPG 590 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~-la~~G---~~V~~~d~rG~~~~g~~~~--~~~~~ 590 (771)
.|.++..++|.|+++.+.+++|+|+++||++.......+...... .++.| +.|+++|+++...++...+ ...+.
T Consensus 28 ~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~~~~r~~~~~~~ 107 (275)
T 2qm0_A 28 EGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFSGEERCYDFTPS 107 (275)
T ss_dssp TCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCCHHHHHHHHCSS
T ss_pred CCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCcccccccccCCC
Confidence 578899999999988767889999999997531111112122222 24567 9999999998543321100 00000
Q ss_pred ----------------Ccc-ccchhhHH--HHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCcc
Q 004149 591 ----------------KVG-SQDVNDVL--TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 591 ----------------~~~-~~~~~D~~--~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 651 (771)
..+ .....+.. +.+.++.++..+|+++++|+||||||++++.++.++|+.|+++++.+|.+
T Consensus 108 ~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~~ 187 (275)
T 2qm0_A 108 VISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPSI 187 (275)
T ss_dssp CCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCT
T ss_pred CccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchhhceeEEeCcee
Confidence 011 01222222 33445555555788999999999999999999999999999999999986
Q ss_pred chhhhhcCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHH-
Q 004149 652 NLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARAL- 730 (771)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l- 730 (771)
.+.... +.. ..+.+.... ......+|++++||+.|..++..+++++++.|
T Consensus 188 ~~~~~~-------------~~~-------------~~~~~~~~~---~~~~~~~~~~l~~G~~D~~~~~~~~~~~~~~L~ 238 (275)
T 2qm0_A 188 WWNNKS-------------VLE-------------KEENLIIEL---NNAKFETGVFLTVGSLEREHMVVGANELSERLL 238 (275)
T ss_dssp THHHHG-------------GGG-------------GTTHHHHHH---HTCSSCEEEEEEEETTSCHHHHHHHHHHHHHHH
T ss_pred eeChHH-------------HHH-------------HHHHHHhhh---cccCCCceEEEEeCCcccchhhHHHHHHHHHHH
Confidence 432110 000 000010000 02345689999999999998999999999999
Q ss_pred --HhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHH
Q 004149 731 --REKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWF 766 (771)
Q Consensus 731 --~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl 766 (771)
++.|+++++.++|+++|+.. ....+...+.||
T Consensus 239 ~~~~~g~~~~~~~~~g~~H~~~----~~~~l~~~l~~l 272 (275)
T 2qm0_A 239 QVNHDKLKFKFYEAEGENHASV----VPTSLSKGLRFI 272 (275)
T ss_dssp HCCCTTEEEEEEEETTCCTTTH----HHHHHHHHHHHH
T ss_pred hcccCCceEEEEECCCCCcccc----HHHHHHHHHHHH
Confidence 55788999999999999643 233445566665
No 157
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=99.73 E-value=1.8e-17 Score=177.62 Aligned_cols=202 Identities=18% Similarity=0.122 Sum_probs=136.4
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhh------hcCCCCc--
Q 004149 521 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEAL------QSLPGKV-- 592 (771)
Q Consensus 521 l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~------~~~~~~~-- 592 (771)
+.+....|.. ..++.|+||++||++.. ...|...++.|+++||.|+++|+||.+....... ......+
T Consensus 84 ~p~~~~~P~~--~~~~~P~Vv~~HG~~~~--~~~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~ 159 (383)
T 3d59_A 84 TPANWNSPLR--PGEKYPLVVFSHGLGAF--RTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLY 159 (383)
T ss_dssp ESSEETCCBC--CSSCEEEEEEECCTTCC--TTTTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEE
T ss_pred eccccCCCcc--cCCCCCEEEEcCCCCCC--chHHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeee
Confidence 4334444432 34578999999997765 3467888999999999999999998544321000 0000000
Q ss_pred -----c-----------ccchhhHHHHHHHHHH--------------------cCCCCCCeEEEEEcChhHHHHHHHHHh
Q 004149 593 -----G-----------SQDVNDVLTAIDHVID--------------------MGLANPSKVTVVGGSHGGFLTTHLIGQ 636 (771)
Q Consensus 593 -----~-----------~~~~~D~~~~i~~l~~--------------------~~~~d~~ri~l~G~S~GG~~a~~~a~~ 636 (771)
+ ....+|+..+++++.+ ...+|.+||+++|||+||.+++.++.+
T Consensus 160 ~~~~~g~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~ 239 (383)
T 3d59_A 160 LRTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSE 239 (383)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred ccccCcccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhh
Confidence 1 0114688888998875 344678899999999999999999887
Q ss_pred CCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCC
Q 004149 637 APDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDL 716 (771)
Q Consensus 637 ~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~ 716 (771)
.+ +++++|+.+|... +.. ...+.++++|+|++||++|.
T Consensus 240 ~~-~v~a~v~~~~~~~------------------------------p~~-----------~~~~~~i~~P~Lii~g~~D~ 277 (383)
T 3d59_A 240 DQ-RFRCGIALDAWMF------------------------------PLG-----------DEVYSRIPQPLFFINSEYFQ 277 (383)
T ss_dssp CT-TCCEEEEESCCCT------------------------------TCC-----------GGGGGSCCSCEEEEEETTTC
T ss_pred CC-CccEEEEeCCccC------------------------------CCc-----------hhhhccCCCCEEEEeccccc
Confidence 55 6999998877421 000 01135678999999999998
Q ss_pred ccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCC------------------CCCh----HHHHHHHHHHHHHHhC
Q 004149 717 RVPVSNGLQYARALREKGVETKVIVFPNDVHGIER------------------PQSD----FESFLNIGLWFKKYCK 771 (771)
Q Consensus 717 ~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~------------------~~~~----~~~~~~i~~wl~~~l~ 771 (771)
.+ .. .+..+.+.+.+.+.+++++++++|.+.. .... ..+.+.+++||+++|+
T Consensus 278 ~~--~~-~~~~~~l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L~ 351 (383)
T 3d59_A 278 YP--AN-IIKMKKCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLG 351 (383)
T ss_dssp CH--HH-HHHHHTTCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ch--hh-HHHHHHHHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHHHcC
Confidence 54 22 2333556666778999999999998631 1112 2233469999999985
No 158
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=99.73 E-value=1.9e-17 Score=169.28 Aligned_cols=213 Identities=17% Similarity=0.222 Sum_probs=129.1
Q ss_pred cEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCe
Q 004149 538 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 617 (771)
Q Consensus 538 p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 617 (771)
+.||++||.+.. ...|...+..|+++||.|+++|+||. |.+.... .....+++.+.+..+++. ++.++
T Consensus 24 ~pvvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G~---G~S~~~~-----~~~~~~~~~~dl~~~l~~--l~~~~ 91 (279)
T 1hkh_A 24 QPVVLIHGYPLD--GHSWERQTRELLAQGYRVITYDRRGF---GGSSKVN-----TGYDYDTFAADLHTVLET--LDLRD 91 (279)
T ss_dssp EEEEEECCTTCC--GGGGHHHHHHHHHTTEEEEEECCTTS---TTSCCCS-----SCCSHHHHHHHHHHHHHH--HTCCS
T ss_pred CcEEEEcCCCch--hhHHhhhHHHHHhCCcEEEEeCCCCC---CCCCCCC-----CCCCHHHHHHHHHHHHHh--cCCCc
Confidence 459999997655 45788889999999999999999994 4442111 112333433333333333 23468
Q ss_pred EEEEEcChhHHHHHHHHHhCCC-ceeEEEecCCccchhhhhcC-C-CCCcch--------------hhhhccCCCCCc--
Q 004149 618 VTVVGGSHGGFLTTHLIGQAPD-KFVAAAARNPLCNLALMVGT-T-DIPDWC--------------YVESYGSKGKDS-- 678 (771)
Q Consensus 618 i~l~G~S~GG~~a~~~a~~~p~-~~~a~v~~~p~~~~~~~~~~-~-~~~~~~--------------~~~~~~~~~~~~-- 678 (771)
+.|+||||||.+++.++.++|+ +++++|+.++.......... . ..+... ....+.......
T Consensus 92 ~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (279)
T 1hkh_A 92 VVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDE 171 (279)
T ss_dssp EEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHTHHH
T ss_pred eEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhHHHHHhhhhhccc
Confidence 9999999999999999999998 99999998874321100000 0 000000 000000000000
Q ss_pred -CCCCCChhhHHHH------------------hhcCccccccCC---CCcEEEEeeCCCCccCcHHH-HHHHHHHHhCCC
Q 004149 679 -FTESPSVEDLTRF------------------HSKSPISHISKV---KTPTIFLLGAQDLRVPVSNG-LQYARALREKGV 735 (771)
Q Consensus 679 -~~~~~~~~~~~~~------------------~~~sp~~~~~~i---~~P~Lii~G~~D~~vp~~~~-~~~~~~l~~~g~ 735 (771)
.......+....+ ...+....+.++ ++|+|+++|++|..+|++.+ +.+.+.+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~---- 247 (279)
T 1hkh_A 172 NLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVP---- 247 (279)
T ss_dssp HBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCT----
T ss_pred CCcccccHHHHHhhhhhhccCcHHHHHHHHHHHhhchhhhHHHhccCCCCEEEEEcCCCccCChHHHHHHHHHhCC----
Confidence 0000000100000 011112235567 89999999999999998877 66666554
Q ss_pred CEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004149 736 ETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 736 ~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 767 (771)
+.+++++++++|.+.. +...++.+.+.+||+
T Consensus 248 ~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~ 278 (279)
T 1hkh_A 248 EADYVEVEGAPHGLLW-THADEVNAALKTFLA 278 (279)
T ss_dssp TSEEEEETTCCTTHHH-HTHHHHHHHHHHHHH
T ss_pred CeeEEEeCCCCccchh-cCHHHHHHHHHHHhh
Confidence 3789999999998753 345678888888885
No 159
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=99.72 E-value=3.9e-17 Score=168.11 Aligned_cols=231 Identities=17% Similarity=0.190 Sum_probs=137.8
Q ss_pred CC-ceEEEEEEecCCCCCCCCCcEEEEEcCCC-CCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004149 517 AQ-KPFEAIFVSSSHKKDCSCDPLIVVLHGGP-HSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 517 ~g-~~l~~~~~~P~~~~~~~~~p~vv~~HGg~-~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
+| ..+++...- .++.|.||++||.+ +......|...+..|++. |.|+++|+|| +|.+.... . ..
T Consensus 21 ~g~~~l~y~~~G------~g~~~~vvllHG~~pg~~~~~~w~~~~~~L~~~-~~via~Dl~G---~G~S~~~~---~-~~ 86 (291)
T 2wue_A 21 DGPLKLHYHEAG------VGNDQTVVLLHGGGPGAASWTNFSRNIAVLARH-FHVLAVDQPG---YGHSDKRA---E-HG 86 (291)
T ss_dssp SSEEEEEEEEEC------TTCSSEEEEECCCCTTCCHHHHTTTTHHHHTTT-SEEEEECCTT---STTSCCCS---C-CS
T ss_pred CCcEEEEEEecC------CCCCCcEEEECCCCCccchHHHHHHHHHHHHhc-CEEEEECCCC---CCCCCCCC---C-CC
Confidence 56 677655432 22346899999964 222233566677778665 9999999999 45442111 1 12
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcC--C----------CC
Q 004149 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT--T----------DI 662 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~--~----------~~ 662 (771)
..++++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.+|.......... . ..
T Consensus 87 ~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
T 2wue_A 87 QFNRYAAMALKGLFDQ--LGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVA 164 (291)
T ss_dssp SHHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHHHHHHHHS
T ss_pred cCHHHHHHHHHHHHHH--hCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHHHHHHhcc
Confidence 3455555555444443 23468999999999999999999999999999999875421000000 0 00
Q ss_pred CcchhhhhccCCCCCcCCCC------------CChhhHHHHhh-----cC-----cc--ccccCCCCcEEEEeeCCCCcc
Q 004149 663 PDWCYVESYGSKGKDSFTES------------PSVEDLTRFHS-----KS-----PI--SHISKVKTPTIFLLGAQDLRV 718 (771)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~-----~s-----p~--~~~~~i~~P~Lii~G~~D~~v 718 (771)
+.+.....+........... ........+.. .+ .. ..+.++++|+|+++|++|..+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~ 244 (291)
T 2wue_A 165 PTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVN 244 (291)
T ss_dssp CCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEEETTCSSS
T ss_pred CCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEEEecCCCCCC
Confidence 00000000000000000000 00000000100 00 11 456788999999999999999
Q ss_pred CcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004149 719 PVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 719 p~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
|++.++.+.+.+. ..++++++++||.... +...++.+.+.+||++
T Consensus 245 ~~~~~~~~~~~~p----~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 245 PLDGALVALKTIP----RAQLHVFGQCGHWVQV-EKFDEFNKLTIEFLGG 289 (291)
T ss_dssp CGGGGHHHHHHST----TEEEEEESSCCSCHHH-HTHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHCC----CCeEEEeCCCCCChhh-hCHHHHHHHHHHHHhc
Confidence 9998888777664 3799999999997653 3455778888888854
No 160
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=99.72 E-value=2.6e-17 Score=165.84 Aligned_cols=215 Identities=17% Similarity=0.147 Sum_probs=127.8
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004149 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
..|+||++||.+.+ ...|...+..|++. |.|+++|+|| +|.+... . ...++++.+.+..+++. .+.
T Consensus 15 ~~~~vvllHG~~~~--~~~w~~~~~~L~~~-~~via~Dl~G---~G~S~~~--~----~~~~~~~a~dl~~~l~~--l~~ 80 (255)
T 3bf7_A 15 NNSPIVLVHGLFGS--LDNLGVLARDLVND-HNIIQVDVRN---HGLSPRE--P----VMNYPAMAQDLVDTLDA--LQI 80 (255)
T ss_dssp CCCCEEEECCTTCC--TTTTHHHHHHHTTT-SCEEEECCTT---STTSCCC--S----CCCHHHHHHHHHHHHHH--HTC
T ss_pred CCCCEEEEcCCccc--HhHHHHHHHHHHhh-CcEEEecCCC---CCCCCCC--C----CcCHHHHHHHHHHHHHH--cCC
Confidence 34779999997765 45688888888765 9999999999 4444221 1 12233333333333332 134
Q ss_pred CeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCc--cch----hhh----h--cCCCCCcchhhh-hccCCCC------
Q 004149 616 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL--CNL----ALM----V--GTTDIPDWCYVE-SYGSKGK------ 676 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~--~~~----~~~----~--~~~~~~~~~~~~-~~~~~~~------ 676 (771)
+++.|+||||||.+++.++.++|++++++|+.++. ... ... . ............ .+.....
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (255)
T 3bf7_A 81 DKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQ 160 (255)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHTTTCCCHHHHH
T ss_pred CCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHHHHHhhhcchhHHHH
Confidence 68999999999999999999999999999986532 110 000 0 000000000000 0000000
Q ss_pred ---CcCC-C--CCChhhHH-HHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccC
Q 004149 677 ---DSFT-E--SPSVEDLT-RFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 749 (771)
Q Consensus 677 ---~~~~-~--~~~~~~~~-~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~ 749 (771)
..+. . ........ .+........+.++++|+|+++|++|..++++.++.+.+.+. ..++++++++||.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~ 236 (255)
T 3bf7_A 161 FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFP----QARAHVIAGAGHWV 236 (255)
T ss_dssp HHHTTEETTEESSCHHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHCT----TEEECCBTTCCSCH
T ss_pred HHHHhccCCceeecHHHHHhhhhhccccccccccCCCeEEEECCCCCCCCHHHHHHHHHHCC----CCeEEEeCCCCCcc
Confidence 0000 0 00000000 000000001256789999999999999999988877766654 38999999999986
Q ss_pred CCCCChHHHHHHHHHHHHHH
Q 004149 750 ERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 750 ~~~~~~~~~~~~i~~wl~~~ 769 (771)
... ....+.+.+.+|+++|
T Consensus 237 ~~e-~p~~~~~~i~~fl~~~ 255 (255)
T 3bf7_A 237 HAE-KPDAVLRAIRRYLNDH 255 (255)
T ss_dssp HHH-CHHHHHHHHHHHHHTC
T ss_pred ccC-CHHHHHHHHHHHHhcC
Confidence 533 3467888999999764
No 161
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=99.72 E-value=2.5e-17 Score=171.10 Aligned_cols=230 Identities=16% Similarity=0.179 Sum_probs=138.7
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchh
Q 004149 519 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 598 (771)
Q Consensus 519 ~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~ 598 (771)
..+++...-|. .+.|.||++||.+.+ ...|...+..|++.||.|+++|+|| +|.+... .......++
T Consensus 34 ~~l~y~~~G~~-----~~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~rvia~Dl~G---~G~S~~~---~~~~~y~~~ 100 (310)
T 1b6g_A 34 LRAHYLDEGNS-----DAEDVFLCLHGEPTW--SYLYRKMIPVFAESGARVIAPDFFG---FGKSDKP---VDEEDYTFE 100 (310)
T ss_dssp CEEEEEEEECT-----TCSCEEEECCCTTCC--GGGGTTTHHHHHHTTCEEEEECCTT---STTSCEE---SCGGGCCHH
T ss_pred eEEEEEEeCCC-----CCCCEEEEECCCCCc--hhhHHHHHHHHHhCCCeEEEeCCCC---CCCCCCC---CCcCCcCHH
Confidence 77876665442 114789999997765 4477788899999999999999999 5554321 111122344
Q ss_pred hHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccc--hhh---h---hcCCCC--Ccchhh
Q 004149 599 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN--LAL---M---VGTTDI--PDWCYV 668 (771)
Q Consensus 599 D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~--~~~---~---~~~~~~--~~~~~~ 668 (771)
++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.++... ... + ...... ..|...
T Consensus 101 ~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (310)
T 1b6g_A 101 FHRNFLLALIER--LDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKYD 178 (310)
T ss_dssp HHHHHHHHHHHH--HTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHH
T ss_pred HHHHHHHHHHHH--cCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccchHHHHHHHH
Confidence 444444444443 1346899999999999999999999999999999887441 000 0 000000 000000
Q ss_pred hhccC------------CCC-----CcCC-CCCChh---hHHHHhh--c-----------Ccccccc-CCCCcEEEEeeC
Q 004149 669 ESYGS------------KGK-----DSFT-ESPSVE---DLTRFHS--K-----------SPISHIS-KVKTPTIFLLGA 713 (771)
Q Consensus 669 ~~~~~------------~~~-----~~~~-~~~~~~---~~~~~~~--~-----------sp~~~~~-~i~~P~Lii~G~ 713 (771)
..... ... ..+. ...... ....+.. . .....+. ++++|+|+++|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~ 258 (310)
T 1b6g_A 179 LVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAIGM 258 (310)
T ss_dssp HHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEET
T ss_pred hccCchhhhhhHHhhcCCCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhhhhhccccCceEEEecc
Confidence 00000 000 0000 000000 0000000 0 0112356 899999999999
Q ss_pred CCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004149 714 QDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 714 ~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
+|..+| +.++.+.+.+.+. ....++++++||.... ...++.+.+.+||++
T Consensus 259 ~D~~~~-~~~~~~~~~ip~~--~~~~i~~~~~GH~~~~--~p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 259 KDKLLG-PDVMYPMKALING--CPEPLEIADAGHFVQE--FGEQVAREALKHFAE 308 (310)
T ss_dssp TCSSSS-HHHHHHHHHHSTT--CCCCEEETTCCSCGGG--GHHHHHHHHHHHHHH
T ss_pred Ccchhh-hHHHHHHHhcccc--cceeeecCCcccchhh--ChHHHHHHHHHHHhc
Confidence 999999 8888887777542 2333334999998775 566888999999975
No 162
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=99.72 E-value=2.4e-17 Score=177.59 Aligned_cols=137 Identities=17% Similarity=0.124 Sum_probs=91.7
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC---------CcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcC
Q 004149 518 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL---------SSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL 588 (771)
Q Consensus 518 g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~---------~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~ 588 (771)
...+.++++.|.+..+.++.|+||++||++..... ..+...+..|+++||.|+++|+||.+.++.......
T Consensus 60 ~~~~~g~l~~P~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~~~~ 139 (397)
T 3h2g_A 60 PATASGVLLIPGGERCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYHPYL 139 (397)
T ss_dssp EEEEEEEEEEEECTTCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSCCTT
T ss_pred eEEEEEEEEeCCCCCCCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCccchh
Confidence 35689999999865556789999999997765431 125667888899999999999999655422110000
Q ss_pred CCCccccchhhHHHHHHHHHHc-CCCCCCeEEEEEcChhHHHHHHHHHh-CC----C-ceeEEEecCCccchh
Q 004149 589 PGKVGSQDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQ-AP----D-KFVAAAARNPLCNLA 654 (771)
Q Consensus 589 ~~~~~~~~~~D~~~~i~~l~~~-~~~d~~ri~l~G~S~GG~~a~~~a~~-~p----~-~~~a~v~~~p~~~~~ 654 (771)
........+.|..+++..+.++ +..++++|+|+||||||++++.++.. .+ + .+.+++..++..++.
T Consensus 140 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~ 212 (397)
T 3h2g_A 140 HSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYALE 212 (397)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCSSHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEecccccccHH
Confidence 0000012345555555555554 33346899999999999999888632 22 2 578888888877764
No 163
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=99.72 E-value=6.3e-17 Score=161.26 Aligned_cols=208 Identities=12% Similarity=0.191 Sum_probs=129.4
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHH------H
Q 004149 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVI------D 609 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~------~ 609 (771)
+.|+||++||.+.. ...|. .+..|+ +||.|+++|+||.+... .......+++.+.+..++ +
T Consensus 15 ~~~~vv~~hG~~~~--~~~~~-~~~~l~-~g~~v~~~d~~g~g~s~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 3e0x_A 15 SPNTLLFVHGSGCN--LKIFG-ELEKYL-EDYNCILLDLKGHGESK---------GQCPSTVYGYIDNVANFITNSEVTK 81 (245)
T ss_dssp CSCEEEEECCTTCC--GGGGT-TGGGGC-TTSEEEEECCTTSTTCC---------SCCCSSHHHHHHHHHHHHHHCTTTT
T ss_pred CCCEEEEEeCCccc--HHHHH-HHHHHH-hCCEEEEecCCCCCCCC---------CCCCcCHHHHHHHHHHHHHhhhhHh
Confidence 46899999997765 33455 555665 89999999999954432 111223555555555554 3
Q ss_pred cCCCCCCeEEEEEcChhHHHHHHHHHh-CCCceeEEEecCCccchhhhh-------cCCCCCcchhhhhccCC-------
Q 004149 610 MGLANPSKVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPLCNLALMV-------GTTDIPDWCYVESYGSK------- 674 (771)
Q Consensus 610 ~~~~d~~ri~l~G~S~GG~~a~~~a~~-~p~~~~a~v~~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~------- 674 (771)
. ++ ++.|+|||+||.+++.++.+ +|+ ++++|+.+|........ .......+.........
T Consensus 82 ~--~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (245)
T 3e0x_A 82 H--QK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNPLSEK 156 (245)
T ss_dssp T--CS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSHHHHH
T ss_pred h--cC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchHHHHH
Confidence 3 33 89999999999999999999 999 99999999976541100 00000000000000000
Q ss_pred CCCcCCCCCC--hhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCC
Q 004149 675 GKDSFTESPS--VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERP 752 (771)
Q Consensus 675 ~~~~~~~~~~--~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~ 752 (771)
....+...+. ..........+....+.++++|+|+++|++|..+|++.++.+.+.+. +++++++++++|.+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~ 232 (245)
T 3e0x_A 157 YFETLEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVE----NSELKIFETGKHFLLVV 232 (245)
T ss_dssp HHTTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSS----SEEEEEESSCGGGHHHH
T ss_pred HHHHHhcCcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHcC----CceEEEeCCCCcceEEe
Confidence 0000000000 01111223344555678899999999999999999998888877764 38999999999986532
Q ss_pred CChHHHHHHHHHHH
Q 004149 753 QSDFESFLNIGLWF 766 (771)
Q Consensus 753 ~~~~~~~~~i~~wl 766 (771)
...++.+.+.+||
T Consensus 233 -~~~~~~~~i~~fl 245 (245)
T 3e0x_A 233 -NAKGVAEEIKNFI 245 (245)
T ss_dssp -THHHHHHHHHTTC
T ss_pred -cHHHHHHHHHhhC
Confidence 3445555555553
No 164
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=99.71 E-value=5.1e-17 Score=167.11 Aligned_cols=216 Identities=15% Similarity=0.189 Sum_probs=136.4
Q ss_pred CCcEEEEEcCCCCCCCCCcch-HHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCC
Q 004149 536 CDPLIVVLHGGPHSVSLSSYS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~-~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 614 (771)
+.|+||++||.+.. ...|. ..+..|++.||.|+++|+|| +|.+... .....+++.+.+..+++. ++
T Consensus 42 ~~~~vv~lHG~~~~--~~~~~~~~~~~l~~~g~~vi~~D~~G---~G~s~~~------~~~~~~~~~~~~~~~l~~--l~ 108 (293)
T 3hss_A 42 TGDPVVFIAGRGGA--GRTWHPHQVPAFLAAGYRCITFDNRG---IGATENA------EGFTTQTMVADTAALIET--LD 108 (293)
T ss_dssp SSEEEEEECCTTCC--GGGGTTTTHHHHHHTTEEEEEECCTT---SGGGTTC------CSCCHHHHHHHHHHHHHH--HT
T ss_pred CCCEEEEECCCCCc--hhhcchhhhhhHhhcCCeEEEEccCC---CCCCCCc------ccCCHHHHHHHHHHHHHh--cC
Confidence 45889999997765 34565 56778889999999999999 4544211 112345555444444443 23
Q ss_pred CCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhc------------CCCCC-cchh----hhhccCCC--
Q 004149 615 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG------------TTDIP-DWCY----VESYGSKG-- 675 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~------------~~~~~-~~~~----~~~~~~~~-- 675 (771)
.+++.|+|||+||.+++.++.++|++++++|+.+|......... ....+ .+.. ...+....
T Consensus 109 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (293)
T 3hss_A 109 IAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLENFSRKTLN 188 (293)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHSCHHHHT
T ss_pred CCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHhhhccccccc
Confidence 46899999999999999999999999999999998754211100 00000 0000 00000000
Q ss_pred -----------CCcCCCCCChhhHHH---HhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEE
Q 004149 676 -----------KDSFTESPSVEDLTR---FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV 741 (771)
Q Consensus 676 -----------~~~~~~~~~~~~~~~---~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 741 (771)
............... ....+....+.++++|+|+++|++|..+|++.++.+.+.+.+ +++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~----~~~~~ 264 (293)
T 3hss_A 189 DDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALPN----GRYLQ 264 (293)
T ss_dssp CHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHSTT----EEEEE
T ss_pred ccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHHCCC----ceEEE
Confidence 000000000000000 111223345678899999999999999999988888777643 79999
Q ss_pred eCCCCccCCCCCChHHHHHHHHHHHHHH
Q 004149 742 FPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 742 ~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 769 (771)
++++||.+.. +...++.+.+.+||++.
T Consensus 265 ~~~~gH~~~~-~~p~~~~~~i~~fl~~~ 291 (293)
T 3hss_A 265 IPDAGHLGFF-ERPEAVNTAMLKFFASV 291 (293)
T ss_dssp ETTCCTTHHH-HSHHHHHHHHHHHHHTC
T ss_pred eCCCcchHhh-hCHHHHHHHHHHHHHhc
Confidence 9999998653 34457888899998753
No 165
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=99.71 E-value=9.1e-17 Score=165.16 Aligned_cols=214 Identities=14% Similarity=0.191 Sum_probs=130.4
Q ss_pred cEEEEEcCCCC-CCCCCcchHHH-HHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004149 538 PLIVVLHGGPH-SVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 538 p~vv~~HGg~~-~~~~~~~~~~~-~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
|+||++||.+. ......|...+ ..|++ +|.|+++|+||. |.+.... ......+++.+.+..+.+. .+.
T Consensus 37 ~~vvllHG~~~~~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~---G~S~~~~----~~~~~~~~~~~~l~~~l~~--l~~ 106 (289)
T 1u2e_A 37 ETVVLLHGSGPGATGWANFSRNIDPLVEA-GYRVILLDCPGW---GKSDSVV----NSGSRSDLNARILKSVVDQ--LDI 106 (289)
T ss_dssp SEEEEECCCSTTCCHHHHTTTTHHHHHHT-TCEEEEECCTTS---TTSCCCC----CSSCHHHHHHHHHHHHHHH--TTC
T ss_pred ceEEEECCCCcccchhHHHHHhhhHHHhc-CCeEEEEcCCCC---CCCCCCC----ccccCHHHHHHHHHHHHHH--hCC
Confidence 38999999642 22233455566 66765 499999999994 4442111 1123456666666666554 245
Q ss_pred CeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCC------------CCcchhhhhccCCCCCcCCCCC
Q 004149 616 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD------------IPDWCYVESYGSKGKDSFTESP 683 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~ 683 (771)
+++.|+||||||.+++.++.++|++++++|+.+|............ .+.+.....+....... ....
T Consensus 107 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 185 (289)
T 1u2e_A 107 AKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFD-TSDL 185 (289)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSC-TTSC
T ss_pred CceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHhhcC-cccC
Confidence 7899999999999999999999999999999887542100000000 00000000000000000 0000
Q ss_pred Chh--------------hHHHHh---------hcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEE
Q 004149 684 SVE--------------DLTRFH---------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVI 740 (771)
Q Consensus 684 ~~~--------------~~~~~~---------~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~ 740 (771)
..+ ....+. ..+....+.++++|+|+++|++|..+|++.++.+.+.+.. .+++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~----~~~~ 261 (289)
T 1u2e_A 186 TDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAG----SELH 261 (289)
T ss_dssp CHHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSTT----CEEE
T ss_pred CHHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCccCHHHHHHHHhhCCC----cEEE
Confidence 000 000000 0112245678899999999999999999998888777643 6899
Q ss_pred EeCCCCccCCCCCChHHHHHHHHHHHH
Q 004149 741 VFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 741 ~~~~~~H~~~~~~~~~~~~~~i~~wl~ 767 (771)
+++++||..... ...++.+.+.+||+
T Consensus 262 ~i~~~gH~~~~e-~p~~~~~~i~~fl~ 287 (289)
T 1u2e_A 262 IFRDCGHWAQWE-HADAFNQLVLNFLA 287 (289)
T ss_dssp EESSCCSCHHHH-THHHHHHHHHHHHT
T ss_pred EeCCCCCchhhc-CHHHHHHHHHHHhc
Confidence 999999986533 35577788888885
No 166
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=99.71 E-value=1.4e-16 Score=164.66 Aligned_cols=234 Identities=11% Similarity=0.122 Sum_probs=135.3
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
.-+|.++++.... +.|+||++||.+.. ...|...+..|++ ||.|+++|+||.+ .+...........
T Consensus 19 ~~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~l~~-~~~v~~~D~~G~G---~S~~~~~~~~~~~ 84 (306)
T 3r40_A 19 NTSSGRIFARVGG--------DGPPLLLLHGFPQT--HVMWHRVAPKLAE-RFKVIVADLPGYG---WSDMPESDEQHTP 84 (306)
T ss_dssp CCTTCCEEEEEEE--------CSSEEEEECCTTCC--GGGGGGTHHHHHT-TSEEEEECCTTST---TSCCCCCCTTCGG
T ss_pred EeCCEEEEEEEcC--------CCCeEEEECCCCCC--HHHHHHHHHHhcc-CCeEEEeCCCCCC---CCCCCCCCcccCC
Confidence 3467777765542 34789999997765 3467778888877 9999999999944 4322111111113
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCC--------------
Q 004149 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT-------------- 660 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~-------------- 660 (771)
...+++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.+|...........
T Consensus 85 ~~~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (306)
T 3r40_A 85 YTKRAMAKQLIEAMEQ--LGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSFLA 162 (306)
T ss_dssp GSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSHHHHHHSTHHHHHT
T ss_pred CCHHHHHHHHHHHHHH--hCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhhhhhhhhHHHHHhh
Confidence 3456666666666655 345689999999999999999999999999999999754321110000
Q ss_pred CC---C-------cchhhhhccCCCCCc-CCCCCChhhHHHHhh--cC------------------------ccccccCC
Q 004149 661 DI---P-------DWCYVESYGSKGKDS-FTESPSVEDLTRFHS--KS------------------------PISHISKV 703 (771)
Q Consensus 661 ~~---~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~s------------------------p~~~~~~i 703 (771)
.. . ...+...+....... .......+....+.. .. ....+.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 242 (306)
T 3r40_A 163 QPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAYADFEHDKIDVEAGNKI 242 (306)
T ss_dssp SCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCB
T ss_pred cccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHhcccccchhhhhhhhhccCC
Confidence 00 0 000000000000000 000011111111110 00 00135788
Q ss_pred CCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHH
Q 004149 704 KTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 704 ~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 769 (771)
++|+|+++|++|.++|+....+.++.+. .++++.++ ++||.+. .+...++.+.|.+||++.
T Consensus 243 ~~P~lii~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~-~~gH~~~-~e~p~~~~~~i~~fl~~~ 303 (306)
T 3r40_A 243 PVPMLALWGASGIAQSAATPLDVWRKWA---SDVQGAPI-ESGHFLP-EEAPDQTAEALVRFFSAA 303 (306)
T ss_dssp CSCEEEEEETTCC------CHHHHHHHB---SSEEEEEE-SSCSCHH-HHSHHHHHHHHHHHHHC-
T ss_pred CcceEEEEecCCcccCchhHHHHHHhhc---CCCeEEEe-cCCcCch-hhChHHHHHHHHHHHHhc
Confidence 9999999999999998555444444432 34777788 7899765 344567889999999764
No 167
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=99.71 E-value=7e-17 Score=166.64 Aligned_cols=229 Identities=17% Similarity=0.149 Sum_probs=136.7
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchh
Q 004149 519 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 598 (771)
Q Consensus 519 ~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~ 598 (771)
..+++...-|. ...|.||++||.+.. ...|...+..|++.||.|+++|+|| +|.+... .......++
T Consensus 33 ~~l~y~~~G~~-----~~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~rvia~Dl~G---~G~S~~~---~~~~~~~~~ 99 (297)
T 2xt0_A 33 LRMHYVDEGPR-----DAEHTFLCLHGEPSW--SFLYRKMLPVFTAAGGRVVAPDLFG---FGRSDKP---TDDAVYTFG 99 (297)
T ss_dssp CCEEEEEESCT-----TCSCEEEEECCTTCC--GGGGTTTHHHHHHTTCEEEEECCTT---STTSCEE---SCGGGCCHH
T ss_pred eEEEEEEccCC-----CCCCeEEEECCCCCc--ceeHHHHHHHHHhCCcEEEEeCCCC---CCCCCCC---CCcccCCHH
Confidence 77876655432 114789999997754 4567788899999999999999999 5544311 111122344
Q ss_pred hHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhh-----------hhc-CCCCCcch
Q 004149 599 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL-----------MVG-TTDIPDWC 666 (771)
Q Consensus 599 D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~-----------~~~-~~~~~~~~ 666 (771)
++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.++...... ... ........
T Consensus 100 ~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (297)
T 2xt0_A 100 FHRRSLLAFLDA--LQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLDVGK 177 (297)
T ss_dssp HHHHHHHHHHHH--HTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHHHHHHHHHTCTTCCHHH
T ss_pred HHHHHHHHHHHH--hCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHHHHHHHhhcccccchhH
Confidence 444444444443 1346899999999999999999999999999999887431000 000 00000000
Q ss_pred hhhhccCCC----CCcCC-CCCCh---hhHHHHhhc--------------Ccccccc-CCCCcEEEEeeCCCCccCcHHH
Q 004149 667 YVESYGSKG----KDSFT-ESPSV---EDLTRFHSK--------------SPISHIS-KVKTPTIFLLGAQDLRVPVSNG 723 (771)
Q Consensus 667 ~~~~~~~~~----~~~~~-~~~~~---~~~~~~~~~--------------sp~~~~~-~i~~P~Lii~G~~D~~vp~~~~ 723 (771)
......... ...+. ..... .....+... .....+. ++++|+|+++|++|..+| ..+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~ 256 (297)
T 2xt0_A 178 LMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLG-PEV 256 (297)
T ss_dssp HHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCEEEEEETTCSSSS-HHH
T ss_pred HHhccCccCCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCeEEEEeCCCcccC-hHH
Confidence 000000000 00000 00000 000011000 0112356 899999999999999999 778
Q ss_pred HHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004149 724 LQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 724 ~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 767 (771)
..+.+.+... ....+.++++||.... ...++.+.|.+||+
T Consensus 257 ~~~~~~~p~~--~~~~~~~~~~GH~~~~--~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 257 MGMLRQAIRG--CPEPMIVEAGGHFVQE--HGEPIARAALAAFG 296 (297)
T ss_dssp HHHHHHHSTT--CCCCEEETTCCSSGGG--GCHHHHHHHHHHTT
T ss_pred HHHHHhCCCC--eeEEeccCCCCcCccc--CHHHHHHHHHHHHh
Confidence 8887776542 3344457899998775 45688888888874
No 168
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=99.71 E-value=1.6e-17 Score=178.38 Aligned_cols=140 Identities=11% Similarity=0.015 Sum_probs=102.9
Q ss_pred ccccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC------------CCcch----HHHHHHHHCCcEEEEECCC
Q 004149 512 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS------------LSSYS----KSLAFLSSVGYSLLIVNYR 575 (771)
Q Consensus 512 ~~~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~------------~~~~~----~~~~~la~~G~~V~~~d~r 575 (771)
.+...+|.++.++++.|++. .++.|+||++||++.... ...|. ..++.|+++||+|+++|+|
T Consensus 96 ~~~~~~g~~l~~~l~~P~~~--~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~r 173 (398)
T 3nuz_A 96 EFYPLPKCVSTFLVLIPDNI--NKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNP 173 (398)
T ss_dssp EECCSTTBCEEEEEEEESSC--CSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECCT
T ss_pred EEEcCCCcEEEEEEEeCCCC--CCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEEEEecCC
Confidence 45566789999999999842 567899999999765321 01122 4778999999999999999
Q ss_pred CCCCCChhhhhc----------------CCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCC
Q 004149 576 GSLGFGEEALQS----------------LPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD 639 (771)
Q Consensus 576 G~~~~g~~~~~~----------------~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~ 639 (771)
|.++.+...... .........+.|+.+++++|.+++.+|++||+|+||||||++++.+++.. +
T Consensus 174 G~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~~-~ 252 (398)
T 3nuz_A 174 AAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLD-T 252 (398)
T ss_dssp TSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHHC-T
T ss_pred CCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhcC-C
Confidence 965543222100 11122223457999999999998888999999999999999999888874 5
Q ss_pred ceeEEEecCCccchh
Q 004149 640 KFVAAAARNPLCNLA 654 (771)
Q Consensus 640 ~~~a~v~~~p~~~~~ 654 (771)
+++++|+.+++..+.
T Consensus 253 ~i~a~v~~~~~~~~~ 267 (398)
T 3nuz_A 253 SIYAFVYNDFLCQTQ 267 (398)
T ss_dssp TCCEEEEESCBCCHH
T ss_pred cEEEEEEecccccch
Confidence 788888877665543
No 169
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=99.71 E-value=1.1e-16 Score=171.33 Aligned_cols=246 Identities=13% Similarity=0.112 Sum_probs=146.8
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCC-------cchHHHH---HHHHCCcEEEEECCCC-CCCCChhhh
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-------SYSKSLA---FLSSVGYSLLIVNYRG-SLGFGEEAL 585 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~-------~~~~~~~---~la~~G~~V~~~d~rG-~~~~g~~~~ 585 (771)
+|..+.+..+.++ ...+.|+||++||.+...... .|...+. .|++.||.|+++|+|| .++......
T Consensus 42 ~g~~l~y~~~g~~---~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~ 118 (377)
T 2b61_A 42 SYINVAYQTYGTL---NDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSS 118 (377)
T ss_dssp CSEEEEEEEESCC---CTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTS
T ss_pred cceeEEEEecccc---cccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcc
Confidence 4566665555433 222358999999977664320 1555543 3667899999999999 444322110
Q ss_pred -hcC-C----CCccccchhhHHHHHHHHHHcCCCCCCeEE-EEEcChhHHHHHHHHHhCCCceeEEEecCCccchhh---
Q 004149 586 -QSL-P----GKVGSQDVNDVLTAIDHVIDMGLANPSKVT-VVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL--- 655 (771)
Q Consensus 586 -~~~-~----~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~-l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~--- 655 (771)
... . ..+....++++.+.+..+++. ++.+++. |+||||||.+++.+|.++|++++++|+.+|......
T Consensus 119 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 196 (377)
T 2b61_A 119 INPQTGKPYGSQFPNIVVQDIVKVQKALLEH--LGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAI 196 (377)
T ss_dssp BCTTTSSBCGGGCCCCCHHHHHHHHHHHHHH--TTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHHH
T ss_pred cCccccccccccCCcccHHHHHHHHHHHHHH--cCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccch
Confidence 000 0 000123567777777777765 3456887 999999999999999999999999999998643210
Q ss_pred -hh-----cCCCCCcchh------------------------------hhhccCCCCCc--------------------C
Q 004149 656 -MV-----GTTDIPDWCY------------------------------VESYGSKGKDS--------------------F 679 (771)
Q Consensus 656 -~~-----~~~~~~~~~~------------------------------~~~~~~~~~~~--------------------~ 679 (771)
+. .....+.|.. ...+....... +
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (377)
T 2b61_A 197 GFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKF 276 (377)
T ss_dssp HHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhhhhhh
Confidence 00 0000000000 00000000000 0
Q ss_pred CCCCChhhH----HHHhhcC-------ccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeC-CCCc
Q 004149 680 TESPSVEDL----TRFHSKS-------PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFP-NDVH 747 (771)
Q Consensus 680 ~~~~~~~~~----~~~~~~s-------p~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~-~~~H 747 (771)
......... ..+...+ ....+.++++|+|+++|++|.++|+++..+..+.+.+....+++++++ ++||
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~gH 356 (377)
T 2b61_A 277 LERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYGH 356 (377)
T ss_dssp HTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTGG
T ss_pred ccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCCCceEEEeCCCCCc
Confidence 000000000 0011111 134567899999999999999999966666666666665678999999 9999
Q ss_pred cCCCCCChHHHHHHHHHHHHH
Q 004149 748 GIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 748 ~~~~~~~~~~~~~~i~~wl~~ 768 (771)
..... ...++.+.|.+||++
T Consensus 357 ~~~~e-~p~~~~~~i~~fl~~ 376 (377)
T 2b61_A 357 DAFLV-DYDQFEKRIRDGLAG 376 (377)
T ss_dssp GHHHH-CHHHHHHHHHHHHHT
T ss_pred hhhhc-CHHHHHHHHHHHHhc
Confidence 87643 345788899999875
No 170
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=99.70 E-value=3.4e-16 Score=160.90 Aligned_cols=194 Identities=12% Similarity=0.018 Sum_probs=129.9
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-----CcchHHHHHHHHCC----cEEEEECCCCCCCCChhhh
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-----SSYSKSLAFLSSVG----YSLLIVNYRGSLGFGEEAL 585 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~-----~~~~~~~~~la~~G----~~V~~~d~rG~~~~g~~~~ 585 (771)
+.++ .+.+++|.|+++.+.+++|+||++||++..... ..+...+..|+++| |+|++||++|..+.+..
T Consensus 48 s~~~-~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~~~~~~~-- 124 (297)
T 1gkl_A 48 GING-TKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQN-- 124 (297)
T ss_dssp ETTE-EEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCSTTCCTTT--
T ss_pred cCCC-EEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCCccchHH--
Confidence 3344 899999999987667789999999997754321 12335567777764 99999999874322111
Q ss_pred hcCCCCccccchhhHHHHHHHHHHcCC------------CCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccch
Q 004149 586 QSLPGKVGSQDVNDVLTAIDHVIDMGL------------ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL 653 (771)
Q Consensus 586 ~~~~~~~~~~~~~D~~~~i~~l~~~~~------------~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~ 653 (771)
+.....+++. .++.+... .++++++|+|+||||++++.++.++|++|+++++.+|...+
T Consensus 125 ------~~~~~~~~l~---~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~~~ 195 (297)
T 1gkl_A 125 ------FYQEFRQNVI---PFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWY 195 (297)
T ss_dssp ------HHHHHHHTHH---HHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCCB
T ss_pred ------HHHHHHHHHH---HHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEecccccc
Confidence 1111133444 44444322 25678999999999999999999999999999999997532
Q ss_pred hhhhcCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhC
Q 004149 654 ALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREK 733 (771)
Q Consensus 654 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~ 733 (771)
... +. ........+... ..+.....++++.+|+.|..+ .+++++.++|++.
T Consensus 196 ~~~---------------~~---------~~~~~~~~~~~~---~~~~~~~~~l~~~~G~~D~~~--~~~~~l~~~L~~~ 246 (297)
T 1gkl_A 196 GNS---------------PQ---------DKANSIAEAINR---SGLSKREYFVFAATGSEDIAY--ANMNPQIEAMKAL 246 (297)
T ss_dssp SSS---------------HH---------HHHHHHHHHHHH---HTCCTTSCEEEEEEETTCTTH--HHHHHHHHHHHTS
T ss_pred CCc---------------cc---------hhhhHHHHHHhh---ccCCcCcEEEEEEeCCCcccc--hhHHHHHHHHHHc
Confidence 100 00 000011111111 112223456777899999875 6788999999998
Q ss_pred C----------CCEEEEEeCCCCccC
Q 004149 734 G----------VETKVIVFPNDVHGI 749 (771)
Q Consensus 734 g----------~~~~~~~~~~~~H~~ 749 (771)
| +++++.++++++|.+
T Consensus 247 g~~~~~~~~~~~~~~~~~~~g~gH~~ 272 (297)
T 1gkl_A 247 PHFDYTSDFSKGNFYFLVAPGATHWW 272 (297)
T ss_dssp TTCCBBSCTTTCCEEEEEETTCCSSH
T ss_pred CCccccccccCCceEEEECCCCCcCH
Confidence 8 589999999999964
No 171
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=99.70 E-value=1.2e-16 Score=164.94 Aligned_cols=229 Identities=14% Similarity=0.081 Sum_probs=137.2
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCC-CCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGP-HSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 595 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~-~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~ 595 (771)
+|.++++... + ..|.||++||.+ .......|...+..|++. |.|+++|+||. |.+. .. ....
T Consensus 24 ~g~~l~y~~~------g--~g~~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~Dl~G~---G~S~-~~----~~~~ 86 (296)
T 1j1i_A 24 GGVETRYLEA------G--KGQPVILIHGGGAGAESEGNWRNVIPILARH-YRVIAMDMLGF---GKTA-KP----DIEY 86 (296)
T ss_dssp TTEEEEEEEE------C--CSSEEEEECCCSTTCCHHHHHTTTHHHHTTT-SEEEEECCTTS---TTSC-CC----SSCC
T ss_pred CCEEEEEEec------C--CCCeEEEECCCCCCcchHHHHHHHHHHHhhc-CEEEEECCCCC---CCCC-CC----CCCC
Confidence 5666664432 1 136799999964 222233466667777655 99999999994 4442 11 1122
Q ss_pred chhhHHHHHHHHHHcCCCCC-CeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhc-CCC----CCcchhhh
Q 004149 596 DVNDVLTAIDHVIDMGLANP-SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-TTD----IPDWCYVE 669 (771)
Q Consensus 596 ~~~D~~~~i~~l~~~~~~d~-~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~-~~~----~~~~~~~~ 669 (771)
..++..+.+..+++.. +. +++.|+||||||.+++.++.++|++++++|+.+|......... ... .+......
T Consensus 87 ~~~~~~~dl~~~l~~l--~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (296)
T 1j1i_A 87 TQDRRIRHLHDFIKAM--NFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMV 164 (296)
T ss_dssp CHHHHHHHHHHHHHHS--CCSSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHHH
T ss_pred CHHHHHHHHHHHHHhc--CCCCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcccCCchHHH
Confidence 3455555554444442 33 6899999999999999999999999999999988642110000 000 00000000
Q ss_pred hccCCCCCcCCCCCChh----------------hHHHHh--------hcCccccccCCCCcEEEEeeCCCCccCcHHHHH
Q 004149 670 SYGSKGKDSFTESPSVE----------------DLTRFH--------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQ 725 (771)
Q Consensus 670 ~~~~~~~~~~~~~~~~~----------------~~~~~~--------~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~ 725 (771)
.+....... ......+ ....+. .......+.++++|+|+++|++|..+|++.+..
T Consensus 165 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~ 243 (296)
T 1j1i_A 165 HLVKALTND-GFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYK 243 (296)
T ss_dssp HHHHHHSCT-TCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHH
T ss_pred HHHHHhccC-cccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcccCHHHHHH
Confidence 000000000 0000000 000000 001223467889999999999999999998888
Q ss_pred HHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHh
Q 004149 726 YARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 726 ~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
+.+.+. +.++++++++||.... +...++.+.+.+||.+.+
T Consensus 244 ~~~~~~----~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~~ 283 (296)
T 1j1i_A 244 FLDLID----DSWGYIIPHCGHWAMI-EHPEDFANATLSFLSLRV 283 (296)
T ss_dssp HHHHCT----TEEEEEESSCCSCHHH-HSHHHHHHHHHHHHHHC-
T ss_pred HHHHCC----CCEEEEECCCCCCchh-cCHHHHHHHHHHHHhccC
Confidence 877664 3789999999998653 345678889999998753
No 172
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=99.70 E-value=2.3e-16 Score=151.22 Aligned_cols=180 Identities=15% Similarity=0.124 Sum_probs=121.3
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHH-HHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004149 537 DPLIVVLHGGPHSVSLSSYSKSLA-FLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~-~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
.|+||++||.+.... ..|...+. .|+++||.|+++|+|.+.. + ..+++.+.+..+.+. . .
T Consensus 4 ~p~vv~~HG~~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~~~~~---------~------~~~~~~~~~~~~~~~--~-~ 64 (192)
T 1uxo_A 4 TKQVYIIHGYRASST-NHWFPWLKKRLLADGVQADILNMPNPLQ---------P------RLEDWLDTLSLYQHT--L-H 64 (192)
T ss_dssp CCEEEEECCTTCCTT-STTHHHHHHHHHHTTCEEEEECCSCTTS---------C------CHHHHHHHHHTTGGG--C-C
T ss_pred CCEEEEEcCCCCCcc-hhHHHHHHHHHHhCCcEEEEecCCCCCC---------C------CHHHHHHHHHHHHHh--c-c
Confidence 478999999776532 15666664 6889999999999993210 1 345555555444443 2 5
Q ss_pred CeEEEEEcChhHHHHHHHHHhCCC--ceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhh
Q 004149 616 SKVTVVGGSHGGFLTTHLIGQAPD--KFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHS 693 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~--~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (771)
++++|+|||+||.+++.++.++|+ +++++|+.+|...... .+..... +...+.
T Consensus 65 ~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~--------~~~~~~~--------~~~~~~--------- 119 (192)
T 1uxo_A 65 ENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLP--------TLQMLDE--------FTQGSF--------- 119 (192)
T ss_dssp TTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCT--------TCGGGGG--------GTCSCC---------
T ss_pred CCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCccc--------cchhhhh--------hhhcCC---------
Confidence 789999999999999999999999 9999999998754211 0000000 000000
Q ss_pred cCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCC--ChHHHHHHHHHHHH
Q 004149 694 KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQ--SDFESFLNIGLWFK 767 (771)
Q Consensus 694 ~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~--~~~~~~~~i~~wl~ 767 (771)
....+.++++|+|+++|++|..+|++.++.+.+.+ . .+++++++++|.+.... ...+....+.+|++
T Consensus 120 --~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~----~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~l~ 188 (192)
T 1uxo_A 120 --DHQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI-D----AALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFS 188 (192)
T ss_dssp --CHHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT-T----CEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHH
T ss_pred --CHHHHHhhcCCEEEEecCCCCcCCHHHHHHHHHhc-C----ceEEEeCCCcCcccccccccHHHHHHHHHHHHH
Confidence 01234456689999999999999999998888877 3 68999999999876332 22233444444443
No 173
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=99.70 E-value=1.4e-16 Score=161.32 Aligned_cols=218 Identities=16% Similarity=0.112 Sum_probs=129.0
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCC
Q 004149 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 614 (771)
+..|.||++||.+.+ ...|...+..|+++||.|+++|+||. |.+.... .....++++.+.+..+++.-. .
T Consensus 8 ~~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G~---G~S~~~~----~~~~~~~~~a~dl~~~l~~l~-~ 77 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLG--AWIWYKLKPLLESAGHKVTAVDLSAA---GINPRRL----DEIHTFRDYSEPLMEVMASIP-P 77 (264)
T ss_dssp -CCCEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTTS---TTCSCCG----GGCCSHHHHHHHHHHHHHHSC-T
T ss_pred CCCCeEEEECCCccc--cchHHHHHHHHHhCCCEEEEeecCCC---CCCCCCc----ccccCHHHHHHHHHHHHHHhC-C
Confidence 456889999997754 34688889999889999999999994 4432110 011234555544444444321 1
Q ss_pred CCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchh---------hhhcCCCCCcch--hhhhccC----------
Q 004149 615 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA---------LMVGTTDIPDWC--YVESYGS---------- 673 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~---------~~~~~~~~~~~~--~~~~~~~---------- 673 (771)
.+++.|+||||||.+++.++.++|++++++|+.++..... .+........|. ....+..
T Consensus 78 ~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
T 2wfl_A 78 DEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMIL 157 (264)
T ss_dssp TCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEESCTTSCEEEEEC
T ss_pred CCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhccCCCCCcchhhh
Confidence 3689999999999999999999999999999988642100 000000000000 0000000
Q ss_pred --CCC-CcCCCCCChhhHHH---HhhcCcc--------ccc---cCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCC
Q 004149 674 --KGK-DSFTESPSVEDLTR---FHSKSPI--------SHI---SKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE 736 (771)
Q Consensus 674 --~~~-~~~~~~~~~~~~~~---~~~~sp~--------~~~---~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~ 736 (771)
... ..+......+.... +....+. ..+ ...++|+|+++|++|..+|++.++.+.+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p~---- 233 (264)
T 2wfl_A 158 GPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVGA---- 233 (264)
T ss_dssp CHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHHCC----
T ss_pred hHHHHHHHHhcCCCHHHHHHHHhccCCCcccccccccccccChHHhCCCCeEEEEeCCcCCCCHHHHHHHHHhCCC----
Confidence 000 00000000011000 0000000 001 11358999999999999999988888877753
Q ss_pred EEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004149 737 TKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 737 ~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 767 (771)
.++++++++||.... +...++.+.+.+|++
T Consensus 234 ~~~~~i~~~gH~~~~-e~P~~~~~~l~~f~~ 263 (264)
T 2wfl_A 234 DKVKEIKEADHMGML-SQPREVCKCLLDISD 263 (264)
T ss_dssp SEEEEETTCCSCHHH-HSHHHHHHHHHHHHC
T ss_pred ceEEEeCCCCCchhh-cCHHHHHHHHHHHhh
Confidence 689999999998663 344577788888864
No 174
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=99.70 E-value=2.6e-17 Score=169.67 Aligned_cols=226 Identities=12% Similarity=0.166 Sum_probs=139.6
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcccc
Q 004149 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 595 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~ 595 (771)
-+|..+++..+.++ ..|+||++||++.. ...|...+..|+ +||.|+++|+||.+ .+... ....
T Consensus 17 ~~g~~l~~~~~g~~------~~~~vl~lHG~~~~--~~~~~~~~~~l~-~~~~v~~~d~~G~G---~s~~~-----~~~~ 79 (299)
T 3g9x_A 17 VLGERMHYVDVGPR------DGTPVLFLHGNPTS--SYLWRNIIPHVA-PSHRCIAPDLIGMG---KSDKP-----DLDY 79 (299)
T ss_dssp ETTEEEEEEEESCS------SSCCEEEECCTTCC--GGGGTTTHHHHT-TTSCEEEECCTTST---TSCCC-----CCCC
T ss_pred eCCeEEEEEecCCC------CCCEEEEECCCCcc--HHHHHHHHHHHc-cCCEEEeeCCCCCC---CCCCC-----CCcc
Confidence 35777776655332 34789999997765 346666777774 69999999999944 43211 1133
Q ss_pred chhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCC----------CCc-
Q 004149 596 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD----------IPD- 664 (771)
Q Consensus 596 ~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~----------~~~- 664 (771)
..+++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.++............ .+.
T Consensus 80 ~~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (299)
T 3g9x_A 80 FFDDHVRYLDAFIEA--LGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRTADV 157 (299)
T ss_dssp CHHHHHHHHHHHHHH--TTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHTSSSH
T ss_pred cHHHHHHHHHHHHHH--hCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHHcCCCc
Confidence 466666666666665 3456899999999999999999999999999999885432210000000 000
Q ss_pred --------chhhhhccCCCCCcCCCCCChhhHHHH-----------------hhc--------------CccccccCCCC
Q 004149 665 --------WCYVESYGSKGKDSFTESPSVEDLTRF-----------------HSK--------------SPISHISKVKT 705 (771)
Q Consensus 665 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~--------------sp~~~~~~i~~ 705 (771)
..+...+.. ..............+ ... +....+.++++
T Consensus 158 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 234 (299)
T 3g9x_A 158 GRELIIDQNAFIEGALP---KCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPV 234 (299)
T ss_dssp HHHHHTTSCHHHHTHHH---HTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCS
T ss_pred chhhhccchhhHHHhhh---hhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhhhhhcccCCC
Confidence 000000000 000000001111100 000 11122567899
Q ss_pred cEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004149 706 PTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 706 P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
|+|+++|++|..+|++.++.+.+.+.+ +++++++++||.+.. +...++.+.|.+++.+
T Consensus 235 P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~-e~p~~~~~~i~~~~~~ 292 (299)
T 3g9x_A 235 PKLLFWGTPGVLIPPAEAARLAESLPN----CKTVDIGPGLHYLQE-DNPDLIGSEIARWLPA 292 (299)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHSTT----EEEEEEEEESSCHHH-HCHHHHHHHHHHHSGG
T ss_pred CeEEEecCCCCCCCHHHHHHHHhhCCC----CeEEEeCCCCCcchh-cCHHHHHHHHHHHHhh
Confidence 999999999999999988888777643 789999999998653 3344666666666543
No 175
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=99.69 E-value=1e-16 Score=167.04 Aligned_cols=226 Identities=15% Similarity=0.202 Sum_probs=139.0
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|..+++...-+ ++.|.||++||.+.+ ...|...+..|++ +|.|+++|+|| +|.+.. +. ....
T Consensus 15 ~g~~l~y~~~G~------g~~~pvvllHG~~~~--~~~w~~~~~~L~~-~~~via~Dl~G---~G~S~~---~~--~~~~ 77 (316)
T 3afi_E 15 LGSSMAYRETGA------QDAPVVLFLHGNPTS--SHIWRNILPLVSP-VAHCIAPDLIG---FGQSGK---PD--IAYR 77 (316)
T ss_dssp TTEEEEEEEESC------TTSCEEEEECCTTCC--GGGGTTTHHHHTT-TSEEEEECCTT---STTSCC---CS--SCCC
T ss_pred CCEEEEEEEeCC------CCCCeEEEECCCCCc--hHHHHHHHHHHhh-CCEEEEECCCC---CCCCCC---CC--CCCC
Confidence 466666554321 223589999998765 4467778888865 49999999999 555421 11 1234
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccc---hhhhh----------------
Q 004149 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN---LALMV---------------- 657 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~---~~~~~---------------- 657 (771)
++++.+.+..+++.- +.+++.|+||||||.+++.+|.++|++++++|+.++... +....
T Consensus 78 ~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (316)
T 3afi_E 78 FFDHVRYLDAFIEQR--GVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARA 155 (316)
T ss_dssp HHHHHHHHHHHHHHT--TCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc--CCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHH
Confidence 566666665555552 347899999999999999999999999999998876321 10000
Q ss_pred --cCCCCCc---c------hhhhhccCCCCCcCCCCCChhhHHHH-----------------hhcC--------------
Q 004149 658 --GTTDIPD---W------CYVESYGSKGKDSFTESPSVEDLTRF-----------------HSKS-------------- 695 (771)
Q Consensus 658 --~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~s-------------- 695 (771)
.....+. . .+...+... ........+....+ ....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (316)
T 3afi_E 156 VFRKFRTPGEGEAMILEANAFVERVLPG---GIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQS 232 (316)
T ss_dssp HHHHHTSTTHHHHHHTTSCHHHHTTTGG---GCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHHH
T ss_pred HHHHhcCCchhhHHHhccchHHHHhccc---ccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHHHH
Confidence 0000000 0 000000000 00000000000000 0000
Q ss_pred ccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHH
Q 004149 696 PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 696 p~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 769 (771)
....+.++++|+|+++|++|..+|++.++.+.+.+. ..++++++++||.... +...++.+.|.+||++.
T Consensus 233 ~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p----~~~~~~i~~~GH~~~~-e~p~~~~~~i~~fl~~~ 301 (316)
T 3afi_E 233 AHAALAASSYPKLLFTGEPGALVSPEFAERFAASLT----RCALIRLGAGLHYLQE-DHADAIGRSVAGWIAGI 301 (316)
T ss_dssp HHHHHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSS----SEEEEEEEEECSCHHH-HHHHHHHHHHHHHHHHH
T ss_pred HHHhhhccCCCeEEEecCCCCccCHHHHHHHHHhCC----CCeEEEcCCCCCCchh-hCHHHHHHHHHHHHhhc
Confidence 011234689999999999999999888887777664 3789999999998653 34567888999999764
No 176
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=99.69 E-value=6.9e-17 Score=169.58 Aligned_cols=223 Identities=16% Similarity=0.166 Sum_probs=135.3
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchh
Q 004149 519 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 598 (771)
Q Consensus 519 ~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~ 598 (771)
..+.+..+.+ ..|+||++||.+.. ...|...+..| ||.|+++|+||. |.+... .......+
T Consensus 70 ~~~~~~~~g~-------~~~~vv~~hG~~~~--~~~~~~~~~~l---g~~Vi~~D~~G~---G~S~~~----~~~~~~~~ 130 (330)
T 3p2m_A 70 GAISALRWGG-------SAPRVIFLHGGGQN--AHTWDTVIVGL---GEPALAVDLPGH---GHSAWR----EDGNYSPQ 130 (330)
T ss_dssp TTEEEEEESS-------SCCSEEEECCTTCC--GGGGHHHHHHS---CCCEEEECCTTS---TTSCCC----SSCBCCHH
T ss_pred ceEEEEEeCC-------CCCeEEEECCCCCc--cchHHHHHHHc---CCeEEEEcCCCC---CCCCCC----CCCCCCHH
Confidence 3466555533 24779999997765 33565555554 999999999994 443211 11223455
Q ss_pred hHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhc--CCC----------CCcch
Q 004149 599 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG--TTD----------IPDWC 666 (771)
Q Consensus 599 D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~--~~~----------~~~~~ 666 (771)
++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.+|......... ... ...+.
T Consensus 131 ~~a~dl~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (330)
T 3p2m_A 131 LNSETLAPVLRE--LAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFP 208 (330)
T ss_dssp HHHHHHHHHHHH--SSTTCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-----------CCBS
T ss_pred HHHHHHHHHHHH--hCCCCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCcccc
Confidence 655555555554 3457899999999999999999999999999999998654211100 000 00000
Q ss_pred hhhhccCCCCCcCCCCCChhhHHHHhhc------------------------CccccccCCCCcEEEEeeCCCCccCcHH
Q 004149 667 YVESYGSKGKDSFTESPSVEDLTRFHSK------------------------SPISHISKVKTPTIFLLGAQDLRVPVSN 722 (771)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------sp~~~~~~i~~P~Lii~G~~D~~vp~~~ 722 (771)
........... ................ .....+.++++|+|+++|++|..+|++.
T Consensus 209 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~ 287 (330)
T 3p2m_A 209 SFQAMLDLTIA-AAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQD 287 (330)
T ss_dssp CHHHHHHHHHH-HCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCHHH
T ss_pred CHHHHHHHHHh-cCCCCCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCHHH
Confidence 00000000000 0000000000000000 0012456789999999999999999998
Q ss_pred HHHHHHHHHhCCCCEE-EEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004149 723 GLQYARALREKGVETK-VIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 723 ~~~~~~~l~~~g~~~~-~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
++.+.+.+.. .+ +++++++||.+.. +...++.+.|.+||++
T Consensus 288 ~~~l~~~~~~----~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 288 TAELHRRATH----FRGVHIVEKSGHSVQS-DQPRALIEIVRGVLDT 329 (330)
T ss_dssp HHHHHHHCSS----EEEEEEETTCCSCHHH-HCHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCC----CeeEEEeCCCCCCcch-hCHHHHHHHHHHHHhc
Confidence 8888776643 67 9999999998753 3455777888888764
No 177
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.69 E-value=2.4e-16 Score=178.00 Aligned_cols=232 Identities=15% Similarity=0.173 Sum_probs=143.8
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcccc
Q 004149 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 595 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~ 595 (771)
.+|.++++.... +.|+||++||++.. ...|...+..|+++||.|+++|+||.+ .+.. +......
T Consensus 245 ~dg~~l~~~~~g--------~~p~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~D~~G~G---~S~~---~~~~~~~ 308 (555)
T 3i28_A 245 KPRVRLHFVELG--------SGPAVCLCHGFPES--WYSWRYQIPALAQAGYRVLAMDMKGYG---ESSA---PPEIEEY 308 (555)
T ss_dssp ETTEEEEEEEEC--------SSSEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTTST---TSCC---CSCGGGG
T ss_pred CCCcEEEEEEcC--------CCCEEEEEeCCCCc--hhHHHHHHHHHHhCCCEEEEecCCCCC---CCCC---CCCcccc
Confidence 367777654432 35899999998765 456778889999999999999999944 3321 1111222
Q ss_pred chhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhh-------------------
Q 004149 596 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM------------------- 656 (771)
Q Consensus 596 ~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~------------------- 656 (771)
..+++.+.+..+++. ++.++++|+|||+||.+++.++.++|++++++|+.+|.......
T Consensus 309 ~~~~~~~d~~~~~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (555)
T 3i28_A 309 CMEVLCKEMVTFLDK--LGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLY 386 (555)
T ss_dssp SHHHHHHHHHHHHHH--HTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHTCGGGHHHHH
T ss_pred cHHHHHHHHHHHHHH--cCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhcCCccchhHH
Confidence 344444444444433 24568999999999999999999999999999988875321000
Q ss_pred hcCCCCCc--------chhhhhccCC---------------------CCCcCCCCCChhhHHHHh---------------
Q 004149 657 VGTTDIPD--------WCYVESYGSK---------------------GKDSFTESPSVEDLTRFH--------------- 692 (771)
Q Consensus 657 ~~~~~~~~--------~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~--------------- 692 (771)
........ ..+...+... ...........+....+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (555)
T 3i28_A 387 FQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWY 466 (555)
T ss_dssp HHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTTTTHHHHHTT
T ss_pred hhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcccchhHHHHH
Confidence 00000000 0000000000 000000000111111110
Q ss_pred -------hcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHH
Q 004149 693 -------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLW 765 (771)
Q Consensus 693 -------~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~w 765 (771)
..+....+.++++|+|+++|++|.++|++.++.+++.+. ++++++++++||.... +...++.+.+.+|
T Consensus 467 ~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~-e~p~~~~~~i~~f 541 (555)
T 3i28_A 467 RNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIP----HLKRGHIEDCGHWTQM-DKPTEVNQILIKW 541 (555)
T ss_dssp SCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCT----TCEEEEETTCCSCHHH-HSHHHHHHHHHHH
T ss_pred HhccccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCC----CceEEEeCCCCCCcch-hCHHHHHHHHHHH
Confidence 012223456889999999999999999998888776664 3789999999997653 4456888999999
Q ss_pred HHHHh
Q 004149 766 FKKYC 770 (771)
Q Consensus 766 l~~~l 770 (771)
|++..
T Consensus 542 l~~~~ 546 (555)
T 3i28_A 542 LDSDA 546 (555)
T ss_dssp HHHHT
T ss_pred HHhcc
Confidence 98764
No 178
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=99.69 E-value=2e-16 Score=161.72 Aligned_cols=224 Identities=14% Similarity=0.078 Sum_probs=137.0
Q ss_pred cEEEEEcCCCCCCCCCcchHH---HHHHHHCCcEEEEECCCCCCCCChhhhhcCC--CCccccchhhH--HHHHHHHHHc
Q 004149 538 PLIVVLHGGPHSVSLSSYSKS---LAFLSSVGYSLLIVNYRGSLGFGEEALQSLP--GKVGSQDVNDV--LTAIDHVIDM 610 (771)
Q Consensus 538 p~vv~~HGg~~~~~~~~~~~~---~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~--~~~~~~~~~D~--~~~i~~l~~~ 610 (771)
|+||++||++.......|... .+.+++.||.|+++|.++...+... ..... +........+. .+.+.++.++
T Consensus 30 ~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~ 108 (280)
T 1dqz_A 30 HAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDW-YQPSQSNGQNYTYKWETFLTREMPAWLQAN 108 (280)
T ss_dssp SEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBC-SSSCTTTTCCSCCBHHHHHHTHHHHHHHHH
T ss_pred CEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCccccCC-CCCCccccccccccHHHHHHHHHHHHHHHH
Confidence 589999997531123344432 3567788999999998864333211 00000 00011223332 2334444443
Q ss_pred CCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCCcCCCCCChhhHHH
Q 004149 611 GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTR 690 (771)
Q Consensus 611 ~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (771)
..+++++++|+|+||||++|+.++.++|++|+++++.+|..+.........+.. ..............+.+. ...
T Consensus 109 ~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~---~~~ 183 (280)
T 1dqz_A 109 KGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSESWWPTLIGL--AMNDSGGYNANSMWGPSS---DPA 183 (280)
T ss_dssp HCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTSTTHHHHHHH--HHHHTTSCCHHHHHCSTT---SHH
T ss_pred cCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccccCcchhhhHHH--HhhhccCcCHHHhcCCCC---chh
Confidence 346777999999999999999999999999999999999876432100000000 000000000000000011 124
Q ss_pred HhhcCccccccCC---CCcEEEEeeCCCC--------------ccCcHHHHHHHHHHHhCC-CCEEEEEeCCCCccCCCC
Q 004149 691 FHSKSPISHISKV---KTPTIFLLGAQDL--------------RVPVSNGLQYARALREKG-VETKVIVFPNDVHGIERP 752 (771)
Q Consensus 691 ~~~~sp~~~~~~i---~~P~Lii~G~~D~--------------~vp~~~~~~~~~~l~~~g-~~~~~~~~~~~~H~~~~~ 752 (771)
+...+|...+.++ .+|+++.+|+.|. .++..++++++++|+++| +++++.++++++|.+.
T Consensus 184 ~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~~-- 261 (280)
T 1dqz_A 184 WKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLRTNQTFRDTYAADGGRNGVFNFPPNGTHSWP-- 261 (280)
T ss_dssp HHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH--
T ss_pred hhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccchhhHHHHHHHHHHHHHHHHHhCCCCceEEEecCCCccChH--
Confidence 5556776555444 5899999999997 577899999999999999 9999999988899752
Q ss_pred CChHHHHHHHHHHHHHHh
Q 004149 753 QSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 753 ~~~~~~~~~i~~wl~~~l 770 (771)
.....+...+.||.+.|
T Consensus 262 -~w~~~l~~~l~~l~~~l 278 (280)
T 1dqz_A 262 -YWNEQLVAMKADIQHVL 278 (280)
T ss_dssp -HHHHHHHHTHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHh
Confidence 22345567777877665
No 179
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=99.69 E-value=2e-16 Score=160.71 Aligned_cols=212 Identities=16% Similarity=0.200 Sum_probs=130.9
Q ss_pred cEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCe
Q 004149 538 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 617 (771)
Q Consensus 538 p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 617 (771)
|.||++||.+.+ ...|...+..|++. |.|+++|+|| +|.+.... . . ...++++.+.+..+++. .+.++
T Consensus 17 ~~vvllHG~~~~--~~~~~~~~~~L~~~-~~vi~~Dl~G---~G~S~~~~--~-~-~~~~~~~~~dl~~~l~~--l~~~~ 84 (269)
T 2xmz_A 17 QVLVFLHGFLSD--SRTYHNHIEKFTDN-YHVITIDLPG---HGEDQSSM--D-E-TWNFDYITTLLDRILDK--YKDKS 84 (269)
T ss_dssp EEEEEECCTTCC--GGGGTTTHHHHHTT-SEEEEECCTT---STTCCCCT--T-S-CCCHHHHHHHHHHHHGG--GTTSE
T ss_pred CeEEEEcCCCCc--HHHHHHHHHHHhhc-CeEEEecCCC---CCCCCCCC--C-C-ccCHHHHHHHHHHHHHH--cCCCc
Confidence 469999997765 44677778888764 9999999999 44442211 1 0 23455655555555554 24578
Q ss_pred EEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhh----cC---CCC------Ccch-hhhhccCCCCCcCCC--
Q 004149 618 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV----GT---TDI------PDWC-YVESYGSKGKDSFTE-- 681 (771)
Q Consensus 618 i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~----~~---~~~------~~~~-~~~~~~~~~~~~~~~-- 681 (771)
+.|+||||||.+++.+|.++|++++++|+.++........ .. ... .... +...+... ..+..
T Consensus 85 ~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 162 (269)
T 2xmz_A 85 ITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKL--PLFQSQL 162 (269)
T ss_dssp EEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS--GGGGGGG
T ss_pred EEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHHHHhC--ccccccc
Confidence 9999999999999999999999999999998754321000 00 000 0000 00000000 00000
Q ss_pred -CC--------------ChhhHH-HHh------hcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEE
Q 004149 682 -SP--------------SVEDLT-RFH------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKV 739 (771)
Q Consensus 682 -~~--------------~~~~~~-~~~------~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~ 739 (771)
.. ...... .+. ..+....+.++++|+|+++|++|..+|+.... +.+.+ .++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~----~~~~~ 237 (269)
T 2xmz_A 163 ELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKK-MANLI----PNSKC 237 (269)
T ss_dssp GSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHHHH-HHHHS----TTEEE
T ss_pred cCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHHHH-HHhhC----CCcEE
Confidence 00 000000 000 01112356788999999999999999876543 54443 34899
Q ss_pred EEeCCCCccCCCCCChHHHHHHHHHHHHHH
Q 004149 740 IVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 740 ~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 769 (771)
++++++||.+.. +...++.+.+.+||++.
T Consensus 238 ~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 238 KLISATGHTIHV-EDSDEFDTMILGFLKEE 266 (269)
T ss_dssp EEETTCCSCHHH-HSHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCChhh-cCHHHHHHHHHHHHHHh
Confidence 999999998764 34567888999999864
No 180
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=99.69 E-value=3.2e-16 Score=160.68 Aligned_cols=231 Identities=15% Similarity=0.233 Sum_probs=131.4
Q ss_pred ccCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcc
Q 004149 514 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 514 ~~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~ 593 (771)
...+|..+++..+.+.+ +.|+||++||.+.+ ...|...+..|++ ||.|+++|+|| +|.+... ....
T Consensus 11 ~~~~g~~l~~~~~g~~~-----~~~~vvllHG~~~~--~~~~~~~~~~L~~-~~~vi~~Dl~G---~G~S~~~---~~~~ 76 (285)
T 3bwx_A 11 TSSDGLRLHFRAYEGDI-----SRPPVLCLPGLTRN--ARDFEDLATRLAG-DWRVLCPEMRG---RGDSDYA---KDPM 76 (285)
T ss_dssp ECTTSCEEEEEEECBCT-----TSCCEEEECCTTCC--GGGGHHHHHHHBB-TBCEEEECCTT---BTTSCCC---SSGG
T ss_pred ecCCCceEEEEEcCCCC-----CCCcEEEECCCCcc--hhhHHHHHHHhhc-CCEEEeecCCC---CCCCCCC---CCcc
Confidence 34567888877765431 24679999997655 4578888888866 99999999999 4444211 0011
Q ss_pred ccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCC--ccchhh------hhcCC-CCCc
Q 004149 594 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNP--LCNLAL------MVGTT-DIPD 664 (771)
Q Consensus 594 ~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p--~~~~~~------~~~~~-~~~~ 664 (771)
...++++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.++ ...... +.... ....
T Consensus 77 ~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (285)
T 3bwx_A 77 TYQPMQYLQDLEALLAQ--EGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERIRGYVGQGRNFET 154 (285)
T ss_dssp GCSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHTTCCCEESS
T ss_pred ccCHHHHHHHHHHHHHh--cCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchhHHHHHHhcCCccccc
Confidence 12233333333333332 1246899999999999999999999999999998643 221100 00000 0000
Q ss_pred chhh-hhccCCCCCcCCCCCChhhHH-------------------------HHhhc-------CccccccCC-CCcEEEE
Q 004149 665 WCYV-ESYGSKGKDSFTESPSVEDLT-------------------------RFHSK-------SPISHISKV-KTPTIFL 710 (771)
Q Consensus 665 ~~~~-~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~-------sp~~~~~~i-~~P~Lii 710 (771)
|... ..+.......+.... ..... .+... .....+.++ ++|+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii 233 (285)
T 3bwx_A 155 WMHAARALQESSGDVYPDWD-ITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVL 233 (285)
T ss_dssp HHHHHHHHHHHHTTTSTTCC-HHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHTTSCEEEE
T ss_pred HHHHHHHHHHhhhhcccccC-hHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHccCCCeEEE
Confidence 1000 000000000000000 00000 00000 000012234 7999999
Q ss_pred eeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004149 711 LGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 711 ~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
+|++|..++++.++.+.+. .++++++++++||.....+ . +.+..|.+||++
T Consensus 234 ~G~~D~~~~~~~~~~~~~~-----~~~~~~~i~~~gH~~~~e~-p-~~~~~i~~fl~~ 284 (285)
T 3bwx_A 234 RGETSDILSAQTAAKMASR-----PGVELVTLPRIGHAPTLDE-P-ESIAAIGRLLER 284 (285)
T ss_dssp EETTCSSSCHHHHHHHHTS-----TTEEEEEETTCCSCCCSCS-H-HHHHHHHHHHTT
T ss_pred EeCCCCccCHHHHHHHHhC-----CCcEEEEeCCCCccchhhC-c-hHHHHHHHHHHh
Confidence 9999999998776665443 4589999999999876443 3 334678888853
No 181
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=99.69 E-value=1.5e-16 Score=168.89 Aligned_cols=122 Identities=20% Similarity=0.263 Sum_probs=88.0
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcccc
Q 004149 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 595 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~ 595 (771)
.+|.++++....|+ ....|+||++||.+.. ...|...+..|+++||.|+++|+||.+ .+.. +......
T Consensus 10 ~~g~~l~y~~~G~~----~~~~~~vv~~hG~~~~--~~~~~~~~~~l~~~g~~vi~~d~~g~g---~s~~---~~~~~~~ 77 (356)
T 2e3j_A 10 CRGTRIHAVADSPP----DQQGPLVVLLHGFPES--WYSWRHQIPALAGAGYRVVAIDQRGYG---RSSK---YRVQKAY 77 (356)
T ss_dssp ETTEEEEEEEECCT----TCCSCEEEEECCTTCC--GGGGTTTHHHHHHTTCEEEEECCTTST---TSCC---CCSGGGG
T ss_pred cCCeEEEEEEecCC----CCCCCEEEEECCCCCc--HHHHHHHHHHHHHcCCEEEEEcCCCCC---CCCC---CCccccc
Confidence 35778887776654 1245889999997765 346777888899999999999999944 3321 1111122
Q ss_pred chhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCcc
Q 004149 596 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 596 ~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 651 (771)
..+++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.++..
T Consensus 78 ~~~~~~~~~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 78 RIKELVGDVVGVLDS--YGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp SHHHHHHHHHHHHHH--TTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred CHHHHHHHHHHHHHH--cCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 344555544444444 345789999999999999999999999999999988654
No 182
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=99.69 E-value=3.1e-16 Score=159.64 Aligned_cols=218 Identities=18% Similarity=0.143 Sum_probs=132.1
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCC
Q 004149 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 616 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 616 (771)
.|.||++||.+.+ ...|...+..|++.||.|+++|+||. |.+... ......++++.+.+..+++.-. ..+
T Consensus 4 ~~~vvllHG~~~~--~~~w~~~~~~L~~~g~rVia~Dl~G~---G~S~~~----~~~~~~~~~~a~dl~~~l~~l~-~~~ 73 (273)
T 1xkl_A 4 GKHFVLVHGACHG--GWSWYKLKPLLEAAGHKVTALDLAAS---GTDLRK----IEELRTLYDYTLPLMELMESLS-ADE 73 (273)
T ss_dssp CCEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEECCCTTS---TTCCCC----GGGCCSHHHHHHHHHHHHHTSC-SSS
T ss_pred CCeEEEECCCCCC--cchHHHHHHHHHhCCCEEEEecCCCC---CCCccC----cccccCHHHHHHHHHHHHHHhc-cCC
Confidence 4789999997754 34678888999999999999999994 443210 0111245555555555555421 136
Q ss_pred eEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchh---------hhhcCCCCCcchh--hhhccCC-----------
Q 004149 617 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA---------LMVGTTDIPDWCY--VESYGSK----------- 674 (771)
Q Consensus 617 ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~---------~~~~~~~~~~~~~--~~~~~~~----------- 674 (771)
++.|+||||||.+++.++.++|++++++|+.++..... .+........|.. ...+...
T Consensus 74 ~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T 1xkl_A 74 KVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFGP 153 (273)
T ss_dssp CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECCH
T ss_pred CEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhccCCCCCccccccCH
Confidence 89999999999999999999999999999888642100 0000000000000 0000000
Q ss_pred -CC-CcCCCCCChhhHHH---HhhcC-----------ccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEE
Q 004149 675 -GK-DSFTESPSVEDLTR---FHSKS-----------PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 738 (771)
Q Consensus 675 -~~-~~~~~~~~~~~~~~---~~~~s-----------p~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~ 738 (771)
.. ..+......+.... +.... ........++|+|+++|++|..+|++.++.+.+.+.. .+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~p~----~~ 229 (273)
T 1xkl_A 154 KFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGV----TE 229 (273)
T ss_dssp HHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHCC----SE
T ss_pred HHHHHHhhccCCHHHHHHHHHhcCCCchhhhhhhcccccchhhhCCCCeEEEEeCCccCCCHHHHHHHHHhCCC----Ce
Confidence 00 00000000010000 00000 0000011368999999999999999988888877743 68
Q ss_pred EEEeCCCCccCCCCCChHHHHHHHHHHHHHH
Q 004149 739 VIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 739 ~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 769 (771)
+++++++||.... +...++.+.+.+|+++.
T Consensus 230 ~~~i~~aGH~~~~-e~P~~~~~~i~~fl~~~ 259 (273)
T 1xkl_A 230 AIEIKGADHMAML-CEPQKLCASLLEIAHKY 259 (273)
T ss_dssp EEEETTCCSCHHH-HSHHHHHHHHHHHHHHC
T ss_pred EEEeCCCCCCchh-cCHHHHHHHHHHHHHHh
Confidence 8999999998763 34457888999999764
No 183
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=99.69 E-value=8.1e-16 Score=161.19 Aligned_cols=237 Identities=19% Similarity=0.248 Sum_probs=135.6
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|..+++...- ..|+||++||.+.. ...|...+..|++.||.|+++|+|| +|.+..... .......
T Consensus 19 ~g~~l~y~~~G--------~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G---~G~S~~~~~-~~~~~~~ 84 (328)
T 2cjp_A 19 NGLNMHLAELG--------EGPTILFIHGFPEL--WYSWRHQMVYLAERGYRAVAPDLRG---YGDTTGAPL-NDPSKFS 84 (328)
T ss_dssp TTEEEEEEEEC--------SSSEEEEECCTTCC--GGGGHHHHHHHHTTTCEEEEECCTT---STTCBCCCT-TCGGGGS
T ss_pred CCcEEEEEEcC--------CCCEEEEECCCCCc--hHHHHHHHHHHHHCCcEEEEECCCC---CCCCCCcCc-CCccccc
Confidence 56667655431 23789999997765 4578888899988999999999999 444421100 1111223
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccc-------hhh-h---hcC------
Q 004149 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN-------LAL-M---VGT------ 659 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~-------~~~-~---~~~------ 659 (771)
++++.+.+..+++.-..+.+++.|+||||||.+++.+|.++|++++++|+.++... ... + ...
T Consensus 85 ~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (328)
T 2cjp_A 85 ILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRNPKMNVVEGLKAIYGEDHYISR 164 (328)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCSSCCHHHHHHHHHCTTBHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccCCCcccccCChHHHHHhhcccchHHHh
Confidence 33333333333332111157899999999999999999999999999999875421 000 0 000
Q ss_pred CCCCcc---h--------hh-hhcc---C------C---CCCcCC------CCCChhhHHHHh----------------h
Q 004149 660 TDIPDW---C--------YV-ESYG---S------K---GKDSFT------ESPSVEDLTRFH----------------S 693 (771)
Q Consensus 660 ~~~~~~---~--------~~-~~~~---~------~---~~~~~~------~~~~~~~~~~~~----------------~ 693 (771)
...+.. . .. ..+. . . ....+. .....+....+. .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (328)
T 2cjp_A 165 FQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNYYRA 244 (328)
T ss_dssp TSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCHHHHHHHHHHHHHHCSHHHHHHHHT
T ss_pred hhCCCcHHHHhhccCHHHHHHHHhcccCCCcccccccchhhhcccccccCcCCCCHHHHHHHHHHhcccCCcchHHHHHh
Confidence 000000 0 00 0000 0 0 000000 000011111000 0
Q ss_pred cC------ccccccCCCCcEEEEeeCCCCccCcHHHHHHH--HHHHhCCCCE-EEEEeCCCCccCCCCCChHHHHHHHHH
Q 004149 694 KS------PISHISKVKTPTIFLLGAQDLRVPVSNGLQYA--RALREKGVET-KVIVFPNDVHGIERPQSDFESFLNIGL 764 (771)
Q Consensus 694 ~s------p~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~--~~l~~~g~~~-~~~~~~~~~H~~~~~~~~~~~~~~i~~ 764 (771)
.. ....+.++++|+|+++|++|..+|+..+.++. +.+.+.-.+. ++++++++||..... ...++.+.|.+
T Consensus 245 ~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~gH~~~~e-~p~~~~~~i~~ 323 (328)
T 2cjp_A 245 LPINWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAHFVSQE-RPHEISKHIYD 323 (328)
T ss_dssp HHHHHHHTGGGTTCCCCSCEEEEEETTCGGGGSTTHHHHHHHSHHHHHSTTBCCCEEETTCCSCHHHH-SHHHHHHHHHH
T ss_pred cccchhhhhhccCCccCCCEEEEEeCCcccccCcchhhhhhhhhHHHHhcCCeeEEEcCCCCCCcchh-CHHHHHHHHHH
Confidence 00 00135678999999999999999876443333 3444333346 788999999986633 45678888999
Q ss_pred HHHH
Q 004149 765 WFKK 768 (771)
Q Consensus 765 wl~~ 768 (771)
||++
T Consensus 324 fl~~ 327 (328)
T 2cjp_A 324 FIQK 327 (328)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 9864
No 184
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=99.69 E-value=5e-17 Score=165.51 Aligned_cols=217 Identities=16% Similarity=0.147 Sum_probs=131.0
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004149 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
+.|+||++||.+.. ...|...+..|.++||.|+++|+||.+.+.... ........+++.+.+..+++. .+.
T Consensus 23 ~~~~vv~lHG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~ 93 (279)
T 4g9e_A 23 EGAPLLMIHGNSSS--GAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAI-----DPDRSYSMEGYADAMTEVMQQ--LGI 93 (279)
T ss_dssp CEEEEEEECCTTCC--GGGGHHHHHSHHHHHEEEEEECCTTSTTSCCCS-----CHHHHSSHHHHHHHHHHHHHH--HTC
T ss_pred CCCeEEEECCCCCc--hhHHHHHHhHHHhcCCeEEeecCCCCCCCCCCC-----CcccCCCHHHHHHHHHHHHHH--hCC
Confidence 45889999997765 446777888877789999999999954432210 011122455555555555554 234
Q ss_pred CeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCc-cchhhhh-cCCCCCcchh----------hhhccCCCCCcCCCCC
Q 004149 616 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL-CNLALMV-GTTDIPDWCY----------VESYGSKGKDSFTESP 683 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~-~~~~~~~-~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 683 (771)
+++.|+|||+||.+++.++.++|+ +.++|+.++. ....... .......... ...+.. ..+....
T Consensus 94 ~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 169 (279)
T 4g9e_A 94 ADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFKSGPDMALAGQEIFSERDVESYAR---STCGEPF 169 (279)
T ss_dssp CCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCSCCCHHHHHHHHH---HHHCSSC
T ss_pred CceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhccchhhhhcCcccccHHHHHHHHH---hhccCcc
Confidence 689999999999999999999999 5555555443 3221110 0000000000 000000 0000000
Q ss_pred ChhhHHHHh------------------hcCccccccCCCCcEEEEeeCCCCccCcHHHHHHH-HHHHhCCCCEEEEEeCC
Q 004149 684 SVEDLTRFH------------------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYA-RALREKGVETKVIVFPN 744 (771)
Q Consensus 684 ~~~~~~~~~------------------~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~-~~l~~~g~~~~~~~~~~ 744 (771)
.......+. ..+....+.++++|+|+++|++|..+|++.+..+. +.+. +++++++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~ 245 (279)
T 4g9e_A 170 EASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPFVELDFVSKVKFGNLW----EGKTHVIDN 245 (279)
T ss_dssp CHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTCSSBCHHHHTTCCCSSBG----GGSCEEETT
T ss_pred cHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCCcccchHHHHHHhhccCC----CCeEEEECC
Confidence 000001110 11222335678999999999999999988777765 3332 367889999
Q ss_pred CCccCCCCCChHHHHHHHHHHHHHHh
Q 004149 745 DVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 745 ~~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
+||.+. .+...++.+.+.+||++.-
T Consensus 246 ~gH~~~-~~~p~~~~~~i~~fl~~~~ 270 (279)
T 4g9e_A 246 AGHAPF-REAPAEFDAYLARFIRDCT 270 (279)
T ss_dssp CCSCHH-HHSHHHHHHHHHHHHHHHH
T ss_pred CCcchH-HhCHHHHHHHHHHHHHHhh
Confidence 999865 3455678899999998753
No 185
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=99.68 E-value=1e-15 Score=159.46 Aligned_cols=118 Identities=18% Similarity=0.278 Sum_probs=78.8
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|..+++...-++ ..|.||++||++.......+ ...+...||.|+++|+|| +|.+... .......
T Consensus 23 ~g~~l~~~~~g~~------~g~~vvllHG~~~~~~~~~~---~~~~~~~~~~vi~~D~~G---~G~S~~~---~~~~~~~ 87 (317)
T 1wm1_A 23 DGHRIYWELSGNP------NGKPAVFIHGGPGGGISPHH---RQLFDPERYKVLLFDQRG---CGRSRPH---ASLDNNT 87 (317)
T ss_dssp SSCEEEEEEEECT------TSEEEEEECCTTTCCCCGGG---GGGSCTTTEEEEEECCTT---STTCBST---TCCTTCS
T ss_pred CCcEEEEEEcCCC------CCCcEEEECCCCCcccchhh---hhhccccCCeEEEECCCC---CCCCCCC---ccccccc
Confidence 5667765544321 23669999997654322112 223445799999999999 4444211 1111223
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCcc
Q 004149 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 651 (771)
.+++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.++..
T Consensus 88 ~~~~~~dl~~l~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 140 (317)
T 1wm1_A 88 TWHLVADIERLREM--AGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFT 140 (317)
T ss_dssp HHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred HHHHHHHHHHHHHH--cCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCC
Confidence 55565556666555 345689999999999999999999999999999987653
No 186
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=99.68 E-value=6.4e-17 Score=177.26 Aligned_cols=242 Identities=17% Similarity=0.206 Sum_probs=142.4
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCC-cchHHHH---HHHHCCcEEEEECCCCCCCCChhhhhcC-C--C
Q 004149 518 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLA---FLSSVGYSLLIVNYRGSLGFGEEALQSL-P--G 590 (771)
Q Consensus 518 g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~-~~~~~~~---~la~~G~~V~~~d~rG~~~~g~~~~~~~-~--~ 590 (771)
|.++++..+.+. ...+.|+||++||.+.+.... .|...+. .|+..||.|+++|+||. ++|.+..... + +
T Consensus 93 g~~l~y~~~G~~---~~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~-~~G~S~~~~~~~~~~ 168 (444)
T 2vat_A 93 DVPVAYKSWGRM---NVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGS-PFGSAGPCSPDPDAE 168 (444)
T ss_dssp EEEEEEEEESCC---CTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTC-SSSSSSTTSBCTTTC
T ss_pred ceeEEEEEecCC---CCCCCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCC-CCCCCCCCCCCcccc
Confidence 444554444332 223458999999977664321 1554443 46578999999999994 1233221000 0 0
Q ss_pred C---c----cccchhhHHHHHHHHHHcCCCCCCe-EEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhh-----
Q 004149 591 K---V----GSQDVNDVLTAIDHVIDMGLANPSK-VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV----- 657 (771)
Q Consensus 591 ~---~----~~~~~~D~~~~i~~l~~~~~~d~~r-i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~----- 657 (771)
. + ....++|+.+.+..+++. ++.++ +.|+||||||.+++.+|.++|++++++|+.++........
T Consensus 169 ~~~~~~~~f~~~t~~~~a~dl~~ll~~--l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~~ 246 (444)
T 2vat_A 169 GQRPYGAKFPRTTIRDDVRIHRQVLDR--LGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFE 246 (444)
T ss_dssp --CBCGGGCCCCCHHHHHHHHHHHHHH--HTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHH
T ss_pred cccccccccccccHHHHHHHHHHHHHh--cCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHHH
Confidence 0 1 123466666666665554 23467 9999999999999999999999999999998865421000
Q ss_pred --c--CCCCCcch------------------------------hhhhccCCCCC-c----------------------CC
Q 004149 658 --G--TTDIPDWC------------------------------YVESYGSKGKD-S----------------------FT 680 (771)
Q Consensus 658 --~--~~~~~~~~------------------------------~~~~~~~~~~~-~----------------------~~ 680 (771)
. ....+.|. +...+...... . +.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (444)
T 2vat_A 247 TQRQCIYDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRA 326 (444)
T ss_dssp HHHHHHHHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC-------------------------
T ss_pred HHHHHHhcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccc
Confidence 0 00000000 00011110000 0 00
Q ss_pred CCC--ChhhH---------------------HHHhhc--------CccccccCCCCcEEEEeeCCCCccCcHHHHHHHHH
Q 004149 681 ESP--SVEDL---------------------TRFHSK--------SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARA 729 (771)
Q Consensus 681 ~~~--~~~~~---------------------~~~~~~--------sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~ 729 (771)
... ..+.. ..+... +....+.++++|+|+++|++|.++|++.++++.+.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~l~~~ 406 (444)
T 2vat_A 327 GQPIEAVSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRS 406 (444)
T ss_dssp --CGGGHHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHH
T ss_pred cCchhhHHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHH
Confidence 000 00000 000000 13345678999999999999999999988888887
Q ss_pred HHhCCCCEEEEEeC-CCCccCCCCCChHHHHHHHHHHHHHHh
Q 004149 730 LREKGVETKVIVFP-NDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 730 l~~~g~~~~~~~~~-~~~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
+.+ +++++++ ++||..... ...++.+.|.+||++++
T Consensus 407 ~p~----~~~~~i~~~~GH~~~~e-~p~~~~~~i~~fL~~~l 443 (444)
T 2vat_A 407 IPN----SRLCVVDTNEGHDFFVM-EADKVNDAVRGFLDQSL 443 (444)
T ss_dssp STT----EEEEECCCSCGGGHHHH-THHHHHHHHHHHHTC--
T ss_pred CCC----cEEEEeCCCCCcchHHh-CHHHHHHHHHHHHHHhc
Confidence 753 7999999 899986543 35678889999998765
No 187
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.68 E-value=2.6e-14 Score=151.03 Aligned_cols=282 Identities=6% Similarity=-0.022 Sum_probs=172.2
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeE
Q 004149 47 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 126 (771)
Q Consensus 47 ~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 126 (771)
...++||+++++.... ... ......++.++.. .++..+....+ .....++|||||+++++..... ..+
T Consensus 46 ~~~s~dg~~l~~~~~~-~~~-~~~~~~v~~~d~~--~~~~~~~~~~~-----~~~~~~~~s~dg~~l~v~~~~~---~~v 113 (353)
T 3vgz_A 46 MAYSQQENALWLATSQ-SRK-LDKGGVVYRLDPV--TLEVTQAIHND-----LKPFGATINNTTQTLWFGNTVN---SAV 113 (353)
T ss_dssp EEEETTTTEEEEEECC-CTT-TEESEEEEEECTT--TCCEEEEEEES-----SCCCSEEEETTTTEEEEEETTT---TEE
T ss_pred eEECCCCCEEEEEcCC-CcC-CCCCccEEEEcCC--CCeEEEEEecC-----CCcceEEECCCCCEEEEEecCC---CEE
Confidence 3456799888655432 111 0124577876653 22332222221 2356789999999887665432 356
Q ss_pred EEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCccccc
Q 004149 127 FELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 205 (771)
Q Consensus 127 ~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (771)
+.++ ..++....+.................++.|||||++|++....
T Consensus 114 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-------------------------------- 161 (353)
T 3vgz_A 114 TAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG-------------------------------- 161 (353)
T ss_dssp EEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES--------------------------------
T ss_pred EEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC--------------------------------
Confidence 6666 4555555555422110000000012468999999987765321
Q ss_pred CCcCcccCCccCceEEEEEccCCceeeccCCC-CCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEE
Q 004149 206 EDWGETYAGKRQPSLFVININSGEVQAVKGIP-KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYA 284 (771)
Q Consensus 206 ~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~-~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~ 284 (771)
....|+++|+.+++.... .+ ....+..++|+|||+. |++.. ....|++
T Consensus 162 ----------~~~~i~~~d~~~~~~~~~--~~~~~~~~~~~~~s~dg~~----l~~~~---------------~~~~i~~ 210 (353)
T 3vgz_A 162 ----------KESVIWVVDGGNIKLKTA--IQNTGKMSTGLALDSEGKR----LYTTN---------------ADGELIT 210 (353)
T ss_dssp ----------SSCEEEEEETTTTEEEEE--ECCCCTTCCCCEEETTTTE----EEEEC---------------TTSEEEE
T ss_pred ----------CCceEEEEcCCCCceEEE--ecCCCCccceEEECCCCCE----EEEEc---------------CCCeEEE
Confidence 136799999999887665 33 3334678899999997 76654 2347889
Q ss_pred EecccccchhhhhhhhcCCCCCCcce-ecCC----CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCC
Q 004149 285 VRVSLYKSEASELELKESSSEDLPVV-NLTE----SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 359 (771)
Q Consensus 285 ~d~~~~~~~~~~~~~~~~~~~~~~~~-~lt~----~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~ 359 (771)
+|+ .+++.. .+.. .........|||||++|+..... ...|+++|+.++
T Consensus 211 ~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----------~~~v~~~d~~~~ 263 (353)
T 3vgz_A 211 IDT-----------------ADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK----------AAEVLVVDTRNG 263 (353)
T ss_dssp EET-----------------TTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS----------SSEEEEEETTTC
T ss_pred EEC-----------------CCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC----------CCEEEEEECCCC
Confidence 997 555443 2222 12235568999999988665533 256999998776
Q ss_pred CCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeE
Q 004149 360 GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSL 439 (771)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~ 439 (771)
+.... +... ....++|+|||++|+++...+ ..|+.+|+.++++..............
T Consensus 264 ~~~~~----------~~~~-----------~~~~~~~s~dg~~l~v~~~~~--~~v~~~d~~~~~~~~~~~~~~~~~~~~ 320 (353)
T 3vgz_A 264 NILAK----------VAAP-----------ESLAVLFNPARNEAYVTHRQA--GKVSVIDAKSYKVVKTFDTPTHPNSLA 320 (353)
T ss_dssp CEEEE----------EECS-----------SCCCEEEETTTTEEEEEETTT--TEEEEEETTTTEEEEEEECCSEEEEEE
T ss_pred cEEEE----------EEcC-----------CCceEEECCCCCEEEEEECCC--CeEEEEECCCCeEEEEEecCCCCCeEE
Confidence 53211 1110 123578999999887765433 467788998888776554444445678
Q ss_pred EeecCCEEEEEEeC
Q 004149 440 LTLDGDNIIAVSSS 453 (771)
Q Consensus 440 ~s~d~~~l~~~~s~ 453 (771)
|++||+.|+++...
T Consensus 321 ~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 321 LSADGKTLYVSVKQ 334 (353)
T ss_dssp ECTTSCEEEEEEEC
T ss_pred EcCCCCEEEEEEcc
Confidence 99999988888766
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.68 E-value=9.3e-16 Score=178.59 Aligned_cols=268 Identities=9% Similarity=0.103 Sum_probs=168.2
Q ss_pred EeCCCCCeEEEEecCCCC-CCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCcc
Q 004149 105 VPSPSGSKLLVVRNPENE-SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFS 182 (771)
Q Consensus 105 ~~SPdG~~la~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~ 182 (771)
..+|||++++|+++..+. ...+|.+. .++..+.+++...-..+. ...+.+++|||||++|||......
T Consensus 78 ~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~---~~~~~~~~~SPDg~~la~~~~~~G------- 147 (710)
T 2xdw_A 78 CHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDG---TVALRGYAFSEDGEYFAYGLSASG------- 147 (710)
T ss_dssp CCEEETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTS---CEEEEEEEECTTSSEEEEEEEETT-------
T ss_pred CCEEECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCC---CEEEEEEEECCCCCEEEEEEcCCC-------
Confidence 345999999999876532 34678877 566666666542211100 012368999999999999876431
Q ss_pred CCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEe
Q 004149 183 LGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVG 262 (771)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~ 262 (771)
....+|+++|+++|+...+ +.....+..++|||||+. |+|++
T Consensus 148 --------------------------------~~~~~i~v~d~~tg~~~~~--~~~~~~~~~~~wspDg~~----l~~~~ 189 (710)
T 2xdw_A 148 --------------------------------SDWVTIKFMKVDGAKELPD--VLERVKFSCMAWTHDGKG----MFYNA 189 (710)
T ss_dssp --------------------------------CSCEEEEEEETTTTEEEEE--EEEEECSCCEEECTTSSE----EEEEE
T ss_pred --------------------------------CceEEEEEEECCCCCCCcc--cccCcccceEEEEeCCCE----EEEEE
Confidence 1235899999999998775 222333668999999999 99988
Q ss_pred ecCcce-eeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc--eecCCC---CccccceeecCCCCEEEEEec
Q 004149 263 WSSETR-KLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--VNLTES---ISSAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 263 ~~~~~~-~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~lt~~---~~~~~~p~~SpDG~~l~f~~~ 336 (771)
...... ..+.....++..+||++++ .++.. +.+... .....++.|||||++|+|.+.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~v~~~~l-----------------~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 190 YPQQDGKSDGTETSTNLHQKLYYHVL-----------------GTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp CCCCSSCCSSSCCCCCCCCEEEEEET-----------------TSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred ECCccccccccccccCCCCEEEEEEC-----------------CCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 543210 0011111234568999998 44442 222222 233568999999999999987
Q ss_pred CCCCCCCCccccccceeeecCC------CC--CCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEee
Q 004149 337 KSSVDSGAHSATDSLHRIDWPT------NG--NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 408 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~~------~~--~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~ 408 (771)
+.. ....+||++|+.+ +. .+.++... + .....|++||+.|++.++
T Consensus 253 ~~~------~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~-----------~----------~~~~~~s~dg~~l~~~s~ 305 (710)
T 2xdw_A 253 EGC------DPVNRLWYCDLQQESNGITGILKWVKLIDNF-----------E----------GEYDYVTNEGTVFTFKTN 305 (710)
T ss_dssp CSS------SSCCEEEEEEGGGSSSSSCSSCCCEEEECSS-----------S----------SCEEEEEEETTEEEEEEC
T ss_pred ccC------CCccEEEEEECcccccccCCccceEEeeCCC-----------C----------cEEEEEeccCCEEEEEEC
Confidence 531 1146899999876 32 22221110 0 012258999999999887
Q ss_pred eCC-eeEEEEEECCCCc---EEEecCCCC--CceeeEEeecCCEEEEEEeCCCCCCeEEEEEec
Q 004149 409 WGS-SQVIISVNVSSGE---LLRITPAES--NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 409 ~~~-~~~l~~~d~~tg~---~~~l~~~~~--~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~ 466 (771)
.+. ...|+.+++++++ .+.++.... .+....++ +++.++++.... ...+|++.++.
T Consensus 306 ~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~lv~~~~~~-g~~~l~~~~~~ 367 (710)
T 2xdw_A 306 RHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACV-RSNFLVLCYLHD-VKNTLQLHDLA 367 (710)
T ss_dssp TTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEE-TTTEEEEEEEET-TEEEEEEEETT
T ss_pred CCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEE-cCCEEEEEEEEC-CEEEEEEEECC
Confidence 544 5689999998874 466665543 23333444 466777666543 33567777763
No 189
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=99.68 E-value=1.5e-15 Score=162.04 Aligned_cols=245 Identities=14% Similarity=0.105 Sum_probs=149.6
Q ss_pred cccccCCCce--EEEEEEecCCCCCCCCCcEEEEEcCCCCCC--CCC----------------cch-HHHHHH-HHCCcE
Q 004149 511 ANLTKGAQKP--FEAIFVSSSHKKDCSCDPLIVVLHGGPHSV--SLS----------------SYS-KSLAFL-SSVGYS 568 (771)
Q Consensus 511 ~~~~~~~g~~--l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~--~~~----------------~~~-~~~~~l-a~~G~~ 568 (771)
+.+.+.+|.+ ..+.++.|.+. ..+.|+|.|-||..+.. +.. .+. ..+..+ .++||+
T Consensus 80 Y~std~~G~p~~~~gtv~~P~~~--~~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~G~~ 157 (462)
T 3guu_A 80 YRTTNTQNEAVADVATVWIPAKP--ASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYY 157 (462)
T ss_dssp EEEECTTSCEEEEEEEEEECSSC--CSSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHTTCE
T ss_pred EEEECCCCCEEEEEEEEEecCCC--CCCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhCCCE
Confidence 3455666665 78899999863 23589999999944321 110 111 245566 899999
Q ss_pred EEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCC-CCCeEEEEEcChhHHHHHHHHHhC----CC-cee
Q 004149 569 LLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA-NPSKVTVVGGSHGGFLTTHLIGQA----PD-KFV 642 (771)
Q Consensus 569 V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~-d~~ri~l~G~S~GG~~a~~~a~~~----p~-~~~ 642 (771)
|+++||+|.+. .+. .+.....++.++++.+.....+ ...+++++|||+||..+++++... |+ .++
T Consensus 158 Vv~~Dy~G~G~---~y~------~~~~~~~~vlD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~ 228 (462)
T 3guu_A 158 VVSSDHEGFKA---AFI------AGYEEGMAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIV 228 (462)
T ss_dssp EEEECTTTTTT---CTT------CHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEEecCCCCCC---ccc------CCcchhHHHHHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceE
Confidence 99999999543 221 1111122334444443333223 247999999999999999887754 33 588
Q ss_pred EEEecCCccchhhhhcCCCCC------------------cc------------------------hhhhh---ccC-CCC
Q 004149 643 AAAARNPLCNLALMVGTTDIP------------------DW------------------------CYVES---YGS-KGK 676 (771)
Q Consensus 643 a~v~~~p~~~~~~~~~~~~~~------------------~~------------------------~~~~~---~~~-~~~ 676 (771)
+++..++..++.......+.. +. |..+. +.. ...
T Consensus 229 g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~~~~~~~~~ 308 (462)
T 3guu_A 229 GASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVLTYPFLNVF 308 (462)
T ss_dssp EEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHHHCTTCCGG
T ss_pred EEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHHhhccCCHH
Confidence 999999888764332111000 00 10000 000 000
Q ss_pred CcCCCCCC---hhhHHHHhhcCccc-----cccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCcc
Q 004149 677 DSFTESPS---VEDLTRFHSKSPIS-----HISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHG 748 (771)
Q Consensus 677 ~~~~~~~~---~~~~~~~~~~sp~~-----~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 748 (771)
..+.+... ......+.+..... -..++++|+||+||.+|.+||+.+++++++.+++.|.+++++.|++++|.
T Consensus 309 ~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~ 388 (462)
T 3guu_A 309 SLVNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHL 388 (462)
T ss_dssp GGBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHH
T ss_pred HHcCCCccccCHHHHHHHHhhcccccccccCCCCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCcc
Confidence 01110000 01111111111101 12456799999999999999999999999999999999999999999997
Q ss_pred CCCCCChHHHHHHHHHHHHHHh
Q 004149 749 IERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 749 ~~~~~~~~~~~~~i~~wl~~~l 770 (771)
... ...+..+++||++++
T Consensus 389 ~~~----~~~~~d~l~WL~~r~ 406 (462)
T 3guu_A 389 TAE----IFGLVPSLWFIKQAF 406 (462)
T ss_dssp HHH----HHTHHHHHHHHHHHH
T ss_pred Cch----hhhHHHHHHHHHHHh
Confidence 642 234688999999876
No 190
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=99.68 E-value=2.1e-16 Score=159.31 Aligned_cols=217 Identities=15% Similarity=0.074 Sum_probs=130.4
Q ss_pred cEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCe
Q 004149 538 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 617 (771)
Q Consensus 538 p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 617 (771)
|.||++||.+.+ ...|...+..|+++||.|+++|+||. |.+... ......++++.+.+..+++.-. ..++
T Consensus 4 ~~vvllHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G~---G~S~~~----~~~~~~~~~~a~dl~~~l~~l~-~~~~ 73 (257)
T 3c6x_A 4 AHFVLIHTICHG--AWIWHKLKPLLEALGHKVTALDLAAS---GVDPRQ----IEEIGSFDEYSEPLLTFLEALP-PGEK 73 (257)
T ss_dssp CEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTTS---TTCSCC----GGGCCSHHHHTHHHHHHHHTSC-TTCC
T ss_pred CcEEEEcCCccC--cCCHHHHHHHHHhCCCEEEEeCCCCC---CCCCCC----cccccCHHHHHHHHHHHHHhcc-ccCC
Confidence 679999997754 44688889999999999999999994 443210 0011235555555555544421 1368
Q ss_pred EEEEEcChhHHHHHHHHHhCCCceeEEEecCCccch-----h----hhhc-CCCC-Ccch-hhh---------hccCCCC
Q 004149 618 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL-----A----LMVG-TTDI-PDWC-YVE---------SYGSKGK 676 (771)
Q Consensus 618 i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~-----~----~~~~-~~~~-~~~~-~~~---------~~~~~~~ 676 (771)
+.|+||||||.+++.++.++|++++++|+.++.... . .... .... ..+. ... .......
T Consensus 74 ~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (257)
T 3c6x_A 74 VILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLL 153 (257)
T ss_dssp EEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHHH
T ss_pred eEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCCCccccccccHHHH
Confidence 999999999999999999999999999988764210 0 0000 0000 0000 000 0000000
Q ss_pred -CcCCCCCChhhHHHHh-hcCc-------------cccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEE
Q 004149 677 -DSFTESPSVEDLTRFH-SKSP-------------ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV 741 (771)
Q Consensus 677 -~~~~~~~~~~~~~~~~-~~sp-------------~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 741 (771)
..+............. ...+ .......++|+|+++|++|..+|++.++.+.+.+. +.++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~~----~~~~~~ 229 (257)
T 3c6x_A 154 RENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYK----PDKVYK 229 (257)
T ss_dssp HHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSC----CSEEEE
T ss_pred HHHHhcCCCHHHHHHHHHhcCCCccchhhhccccccChhhcCcccEEEEEeCCCcccCHHHHHHHHHHCC----CCeEEE
Confidence 0000000111101000 0001 00001126899999999999999998888877764 368999
Q ss_pred eCCCCccCCCCCChHHHHHHHHHHHHHH
Q 004149 742 FPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 742 ~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 769 (771)
++++||... .+...++.+.+.+|++++
T Consensus 230 i~~~gH~~~-~e~P~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 230 VEGGDHKLQ-LTKTKEIAEILQEVADTY 256 (257)
T ss_dssp CCSCCSCHH-HHSHHHHHHHHHHHHHHC
T ss_pred eCCCCCCcc-cCCHHHHHHHHHHHHHhc
Confidence 999999876 344567888899998764
No 191
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=99.67 E-value=5.9e-17 Score=171.88 Aligned_cols=224 Identities=13% Similarity=0.114 Sum_probs=131.9
Q ss_pred CCcEEEEEcCCCCCCCC---Ccch-----------HHHHHHHHCCcEEEEECCCCCCCCChhhhhcCC--CCcc-ccchh
Q 004149 536 CDPLIVVLHGGPHSVSL---SSYS-----------KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP--GKVG-SQDVN 598 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~---~~~~-----------~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~--~~~~-~~~~~ 598 (771)
+.|+||++||++..... ..|. ..+..|+++||.|+++|+||.+........... ..+. ...++
T Consensus 49 ~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 128 (354)
T 2rau_A 49 GNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWIS 128 (354)
T ss_dssp CEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGGGGGTTCSHHHHHH
T ss_pred CCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccccccccCCcHHHHHH
Confidence 46899999997765310 0222 678889999999999999994433211000000 0111 22357
Q ss_pred hHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhC-CCceeEEEecCCccchhhhhcCC-----------------
Q 004149 599 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGTT----------------- 660 (771)
Q Consensus 599 D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~p~~~~~~~~~~~----------------- 660 (771)
|+.++++++.++ .+.++++|+|||+||.+++.++.++ |++++++|+.++...........
T Consensus 129 d~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (354)
T 2rau_A 129 DIKEVVSFIKRD--SGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGIY 206 (354)
T ss_dssp HHHHHHHHHHHH--HCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSCBCTTCC--CCCCSCSSHHHHHHHTCC
T ss_pred HHHHHHHHHHHh--cCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccccccCcccchhhhhhhhHHHhhhhccc
Confidence 888888888765 3457899999999999999999998 99999999986542210000000
Q ss_pred ------CCC------------------------cchhhhhccCCCCCcCC-CCCChhhHH-HH------------hhcCc
Q 004149 661 ------DIP------------------------DWCYVESYGSKGKDSFT-ESPSVEDLT-RF------------HSKSP 696 (771)
Q Consensus 661 ------~~~------------------------~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~------------~~~sp 696 (771)
... .|.....+.......+. ......... .+ ...+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (354)
T 2rau_A 207 VIPSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFDPYWPYRLSLERDL 286 (354)
T ss_dssp EEECSSSTTCTHHHHHHHSTTSCCSSTTSSSHHHHHHHHHHHTTSCCTTSTTCCCHHHHHHHHHTSCSEEEHHHHHTTTC
T ss_pred ccCCCchhhhHHHHHhccccccCccccchhhHHHHHHHhhhccccCCcccCCCccHHHHHHHHhhhccccccccccCccc
Confidence 000 00000000000000000 000001111 11 11223
Q ss_pred cccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCC--CCChHHHHHHHHHHHHHH
Q 004149 697 ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER--PQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 697 ~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~--~~~~~~~~~~i~~wl~~~ 769 (771)
...+.++++|+|+++|++|.++|. .++. + ....++++++++||.... ++...++.+.+.+||+++
T Consensus 287 ~~~l~~i~~P~Lii~G~~D~~~p~-~~~~----l---~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 287 KFDYEGILVPTIAFVSERFGIQIF-DSKI----L---PSNSEIILLKGYGHLDVYTGENSEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp CCCCTTCCCCEEEEEETTTHHHHB-CGGG----S---CTTCEEEEETTCCGGGGTSSTTHHHHTHHHHHHHHHHH
T ss_pred ccccccCCCCEEEEecCCCCCCcc-chhh----h---ccCceEEEcCCCCCchhhcCCCcHHHHHHHHHHHHHhc
Confidence 345668999999999999997763 2222 2 235799999999997643 344568899999999875
No 192
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.67 E-value=4.6e-16 Score=164.37 Aligned_cols=248 Identities=11% Similarity=0.063 Sum_probs=157.0
Q ss_pred cceEEEeCCCCCeEEEEecCCC-----CCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecC
Q 004149 100 GASAVVPSPSGSKLLVVRNPEN-----ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 173 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~ 173 (771)
....|++ ||++|||+....+ ....++.++ .+++.+++ ... ..+.|||||++|||.+..
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~----------~~~~~SpDg~~la~~~~~ 79 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENA----------TMPRISPDGKKIAFMRAN 79 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESC----------EEEEECTTSSEEEEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccC----------CCeEECCCCCEEEEEEec
Confidence 3567888 9999999875321 234577776 55554444 222 589999999999998754
Q ss_pred CCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCC
Q 004149 174 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 253 (771)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~ 253 (771)
.. ....+||++|+++++.+.+ +.... +..+.|||||+.
T Consensus 80 ~~---------------------------------------~~~~~l~~~~~~~g~~~~l--~~~~~-~~~~~wspdg~~ 117 (347)
T 2gop_A 80 EE---------------------------------------KKVSEIWVADLETLSSKKI--LEAKN-IRSLEWNEDSRK 117 (347)
T ss_dssp TT---------------------------------------TTEEEEEEEETTTTEEEEE--EEESE-EEEEEECTTSSE
T ss_pred cC---------------------------------------CCcceEEEEECCCCceEEE--EcCCC-ccceeECCCCCE
Confidence 21 0236899999999998888 33333 788999999999
Q ss_pred CccEEEEEeecCcce-------e-----eeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eecCCCCcccc
Q 004149 254 LHQYLVFVGWSSETR-------K-----LGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTESISSAF 320 (771)
Q Consensus 254 ~~~~l~~~~~~~~~~-------~-----~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~~~~~~ 320 (771)
|+|.+...... + .|..+......+||++|+ .+++. +.|+. . .+.
T Consensus 118 ----l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~-----------------~~~~~~~~l~~-~-~~~ 174 (347)
T 2gop_A 118 ----LLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDT-----------------ESEEVIEEFEK-P-RFS 174 (347)
T ss_dssp ----EEEEEECCCC---------CCCC---------CEEEEEEEET-----------------TTTEEEEEEEE-E-TTC
T ss_pred ----EEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEEC-----------------CCCeEEeeecC-C-Ccc
Confidence 99987531000 0 010011112358999998 77777 77776 4 778
Q ss_pred ceeecCCCCEEEEEecCCCCCCCCccc-cccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccC
Q 004149 321 FPRFSPDGKFLVFLSAKSSVDSGAHSA-TDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD 399 (771)
Q Consensus 321 ~p~~SpDG~~l~f~~~~~~~~~g~~~~-~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~d 399 (771)
.+.||||| |+|....... ..... ..+||.+| +++.+.++.. . .. ..+|||
T Consensus 175 ~~~~spdg--~~~~~~~~~~--~~~~~~~~~l~~~d--~~~~~~l~~~-~--------------------~~--~~~spd 225 (347)
T 2gop_A 175 SGIWHRDK--IVVNVPHREI--IPQYFKFWDIYIWE--DGKEEKMFEK-V--------------------SF--YAVDSD 225 (347)
T ss_dssp EEEEETTE--EEEEEECCCS--SCCSSCCEEEEEEE--TTEEEEEEEE-E--------------------SE--EEEEEC
T ss_pred cccCCCCe--EEEEEecccc--cccccccccEEEeC--CCceEEeccC-c--------------------ce--eeECCC
Confidence 89999999 7777754310 00001 45789888 4443333211 0 01 124999
Q ss_pred CCEEEEEeeeC-----CeeEEEEEECCCCcEEEecCCC-CCcee-eEEeecCCEEEEEEeCCCCCCeEEEEE
Q 004149 400 GCTMLLSSIWG-----SSQVIISVNVSSGELLRITPAE-SNFSW-SLLTLDGDNIIAVSSSPVDVPQVKYGY 464 (771)
Q Consensus 400 g~~l~~~~~~~-----~~~~l~~~d~~tg~~~~l~~~~-~~~~~-~~~s~d~~~l~~~~s~~~~p~~l~~~~ 464 (771)
|+.|++.+... ....||.+| +++.+.++... ..+.. ..|+ |+ ++++.+... ..+|| .+
T Consensus 226 g~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~-~~~l~-~~ 290 (347)
T 2gop_A 226 GERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK--VYFTLFEEG-SVNLY-IW 290 (347)
T ss_dssp SSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE--EEEEEEETT-EEEEE-EE
T ss_pred CCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc--EEEEEecCC-cEEEE-Ec
Confidence 99998887543 246899999 78888887653 23332 5677 65 655554333 34566 54
No 193
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.67 E-value=9.1e-15 Score=157.17 Aligned_cols=243 Identities=14% Similarity=0.110 Sum_probs=163.6
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004149 100 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
....++|||||++|++....+ ..+..++ ..++..+.+.....+ .+++|||||++|++....
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d---~~i~v~d~~~~~~~~~~~~~~~v----------~~~~~spdg~~l~~~~~~----- 94 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHS---NDVSIIDTATNNVIATVPAGSSP----------QGVAVSPDGKQVYVTNMA----- 94 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGG---TEEEEEETTTTEEEEEEECSSSE----------EEEEECTTSSEEEEEETT-----
T ss_pred CcceEEECCCCCEEEEECCCC---CeEEEEECCCCeEEEEEECCCCc----------cceEECCCCCEEEEEECC-----
Confidence 467899999999987665332 2344433 345555544443333 589999999999886422
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEE
Q 004149 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 258 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l 258 (771)
...|++||+.+++.... ......+..++|+|||+. |
T Consensus 95 --------------------------------------~~~v~v~d~~~~~~~~~--~~~~~~~~~~~~s~dg~~----l 130 (391)
T 1l0q_A 95 --------------------------------------SSTLSVIDTTSNTVAGT--VKTGKSPLGLALSPDGKK----L 130 (391)
T ss_dssp --------------------------------------TTEEEEEETTTTEEEEE--EECSSSEEEEEECTTSSE----E
T ss_pred --------------------------------------CCEEEEEECCCCeEEEE--EeCCCCcceEEECCCCCE----E
Confidence 26799999999987666 344456788999999997 7
Q ss_pred EEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCC
Q 004149 259 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 338 (771)
Q Consensus 259 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~ 338 (771)
++++. ....|+++|+ .+++.............+.|+|||+.|++....+
T Consensus 131 ~~~~~--------------~~~~v~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~ 179 (391)
T 1l0q_A 131 YVTNN--------------GDKTVSVINT-----------------VTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDS 179 (391)
T ss_dssp EEEET--------------TTTEEEEEET-----------------TTTEEEEEEECCSSEEEEEECTTSSEEEEEETTT
T ss_pred EEEeC--------------CCCEEEEEEC-----------------CCCcEEEEEecCCCcceEEECCCCCEEEEEeCCC
Confidence 76652 2347999998 5665544433344567899999999887665432
Q ss_pred CCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEE
Q 004149 339 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 418 (771)
Q Consensus 339 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~ 418 (771)
..|+++|+.+++...... . . ..+..++|+|||+.|++.........|+.+
T Consensus 180 ----------~~v~~~d~~~~~~~~~~~----------~---~-------~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~ 229 (391)
T 1l0q_A 180 ----------MSISVIDTVTNSVIDTVK----------V---E-------AAPSGIAVNPEGTKAYVTNVDKYFNTVSMI 229 (391)
T ss_dssp ----------TEEEEEETTTTEEEEEEE----------C---S-------SEEEEEEECTTSSEEEEEEECSSCCEEEEE
T ss_pred ----------CEEEEEECCCCeEEEEEe----------c---C-------CCccceEECCCCCEEEEEecCcCCCcEEEE
Confidence 469999988765321110 0 0 013356899999988877653345678888
Q ss_pred ECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 419 NVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 419 d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
|+.+++...............++++++.++++.+.. ..+.+.++.++
T Consensus 230 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d---~~v~v~d~~~~ 276 (391)
T 1l0q_A 230 DTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFX---NTVSVIDTATN 276 (391)
T ss_dssp ETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTT---TEEEEEETTTT
T ss_pred ECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCC---CEEEEEECCCC
Confidence 998887665554444445568899999887776433 46777776543
No 194
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=99.67 E-value=1.5e-15 Score=156.38 Aligned_cols=227 Identities=16% Similarity=0.202 Sum_probs=132.8
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|..+++...- ..|.||++||.+.+ ...|...+..|++. |.|+++|+|| +|.+... .........
T Consensus 17 ~g~~l~y~~~G--------~g~~lvllHG~~~~--~~~w~~~~~~L~~~-~~via~Dl~G---~G~S~~~-~~~~~~~~~ 81 (294)
T 1ehy_A 17 PDVKIHYVREG--------AGPTLLLLHGWPGF--WWEWSKVIGPLAEH-YDVIVPDLRG---FGDSEKP-DLNDLSKYS 81 (294)
T ss_dssp SSCEEEEEEEE--------CSSEEEEECCSSCC--GGGGHHHHHHHHTT-SEEEEECCTT---STTSCCC-CTTCGGGGC
T ss_pred CCEEEEEEEcC--------CCCEEEEECCCCcc--hhhHHHHHHHHhhc-CEEEecCCCC---CCCCCCC-ccccccCcC
Confidence 56677654432 23789999997765 45788888888776 9999999999 5544321 000001234
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccc-hh-hhhcCC-CCCcch-------
Q 004149 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN-LA-LMVGTT-DIPDWC------- 666 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~-~~-~~~~~~-~~~~~~------- 666 (771)
++++.+.+..+++.- +.+++.|+||||||.+++.+|.++|++++++|+.++... .. ...... ....|.
T Consensus 82 ~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
T 1ehy_A 82 LDKAADDQAALLDAL--GIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLD 159 (294)
T ss_dssp HHHHHHHHHHHHHHT--TCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHc--CCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceEEEecCcc
Confidence 566666665555552 346899999999999999999999999999999886321 10 000000 000010
Q ss_pred h---------------hhhccCCCCCcCCCCCChhhHHHHh-----------------h--cCccc-----cccCCCCcE
Q 004149 667 Y---------------VESYGSKGKDSFTESPSVEDLTRFH-----------------S--KSPIS-----HISKVKTPT 707 (771)
Q Consensus 667 ~---------------~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~--~sp~~-----~~~~i~~P~ 707 (771)
. ...+....... ......+....+. . ..... .+.++++|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 238 (294)
T 1ehy_A 160 MAVEVVGSSREVCKKYFKHFFDHWSYR-DELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPV 238 (294)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHTSSS-SCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCE
T ss_pred hhHHHhccchhHHHHHHHHHhhcccCC-CCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhhhhhhcCCcccCcCCCCE
Confidence 0 00000000000 0000111111110 0 00001 233789999
Q ss_pred EEEeeCCCCccCc-HHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHH
Q 004149 708 IFLLGAQDLRVPV-SNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWF 766 (771)
Q Consensus 708 Lii~G~~D~~vp~-~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl 766 (771)
|+++|++|..+|+ .....+.+.+ ...++++++++||.... +...++.+.|.+||
T Consensus 239 Lvi~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 239 TMIWGLGDTCVPYAPLIEFVPKYY----SNYTMETIEDCGHFLMV-EKPEIAIDRIKTAF 293 (294)
T ss_dssp EEEEECCSSCCTTHHHHHHHHHHB----SSEEEEEETTCCSCHHH-HCHHHHHHHHHHHC
T ss_pred EEEEeCCCCCcchHHHHHHHHHHc----CCCceEEeCCCCCChhh-hCHHHHHHHHHHHh
Confidence 9999999999884 4444544433 34899999999997653 33456777777775
No 195
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=99.66 E-value=1.4e-16 Score=163.94 Aligned_cols=230 Identities=15% Similarity=0.060 Sum_probs=137.7
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCcccc
Q 004149 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 595 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~ 595 (771)
-+|..++...+. +.|+||++||.+.. ...|...+..|++ +|.|+++|+||.+ .+..... ......
T Consensus 15 ~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~l~~-~~~vi~~D~~G~G---~S~~~~~-~~~~~~ 79 (297)
T 2qvb_A 15 IAGKRMAYIDEG--------KGDAIVFQHGNPTS--SYLWRNIMPHLEG-LGRLVACDLIGMG---ASDKLSP-SGPDRY 79 (297)
T ss_dssp ETTEEEEEEEES--------SSSEEEEECCTTCC--GGGGTTTGGGGTT-SSEEEEECCTTST---TSCCCSS-CSTTSS
T ss_pred ECCEEEEEEecC--------CCCeEEEECCCCch--HHHHHHHHHHHhh-cCeEEEEcCCCCC---CCCCCCC-ccccCc
Confidence 356777655442 24889999997765 3356666677755 5999999999944 4321110 011113
Q ss_pred chhhHHHHHHHHHHcCCCCC-CeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCC----------CCCc
Q 004149 596 DVNDVLTAIDHVIDMGLANP-SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT----------DIPD 664 (771)
Q Consensus 596 ~~~D~~~~i~~l~~~~~~d~-~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~----------~~~~ 664 (771)
..+++.+.+..+++. ++. +++.|+|||+||.+++.++.++|++++++|+.+|........... ..+.
T Consensus 80 ~~~~~~~~~~~~l~~--~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (297)
T 2qvb_A 80 SYGEQRDFLFALWDA--LDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQ 157 (297)
T ss_dssp CHHHHHHHHHHHHHH--TTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHTSTT
T ss_pred CHHHHHHHHHHHHHH--cCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHHHhccc
Confidence 455555555555554 244 789999999999999999999999999999998865311000000 0000
Q ss_pred -c-------hhhhhcc-----CCC--------CCcCCCC-CChhhH-HHHhhc--------------CccccccCCCCcE
Q 004149 665 -W-------CYVESYG-----SKG--------KDSFTES-PSVEDL-TRFHSK--------------SPISHISKVKTPT 707 (771)
Q Consensus 665 -~-------~~~~~~~-----~~~--------~~~~~~~-~~~~~~-~~~~~~--------------sp~~~~~~i~~P~ 707 (771)
. .+...+. ... ...+... ...... ..+... +....+.++++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 237 (297)
T 2qvb_A 158 GEPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPK 237 (297)
T ss_dssp HHHHHHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCE
T ss_pred chhhhccccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhcccccccE
Confidence 0 0000000 000 0000000 000000 011111 1123456789999
Q ss_pred EEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHH
Q 004149 708 IFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 708 Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 769 (771)
|+++|++|..+|++.++.+.+.+ .. +++++ +++|.+.. +...++.+.+.+||++.
T Consensus 238 lii~G~~D~~~~~~~~~~~~~~~----~~-~~~~~-~~gH~~~~-~~p~~~~~~i~~fl~~~ 292 (297)
T 2qvb_A 238 LFINAEPGAIITGRIRDYVRSWP----NQ-TEITV-PGVHFVQE-DSPEEIGAAIAQFVRRL 292 (297)
T ss_dssp EEEEEEECSSSCHHHHHHHHTSS----SE-EEEEE-EESSCGGG-TCHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCcCCHHHHHHHHHHc----CC-eEEEe-cCccchhh-hCHHHHHHHHHHHHHHH
Confidence 99999999999988777665544 23 78888 99998664 45668889999999875
No 196
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*
Probab=99.66 E-value=1.3e-16 Score=162.25 Aligned_cols=219 Identities=16% Similarity=0.160 Sum_probs=131.4
Q ss_pred cEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCe
Q 004149 538 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 617 (771)
Q Consensus 538 p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 617 (771)
|+||++||.+.+ ...|...+..|++ +|.|+++|+||. |.+...... ......++++.+.+..+++. ++.++
T Consensus 21 ~~vvllHG~~~~--~~~w~~~~~~L~~-~~~vi~~Dl~G~---G~S~~~~~~-~~~~~~~~~~a~dl~~~l~~--l~~~~ 91 (271)
T 1wom_A 21 ASIMFAPGFGCD--QSVWNAVAPAFEE-DHRVILFDYVGS---GHSDLRAYD-LNRYQTLDGYAQDVLDVCEA--LDLKE 91 (271)
T ss_dssp SEEEEECCTTCC--GGGGTTTGGGGTT-TSEEEECCCSCC---SSSCCTTCC-TTGGGSHHHHHHHHHHHHHH--TTCSC
T ss_pred CcEEEEcCCCCc--hhhHHHHHHHHHh-cCeEEEECCCCC---CCCCCCccc-ccccccHHHHHHHHHHHHHH--cCCCC
Confidence 789999996654 3456666777765 799999999994 443211100 00112344444444444443 23578
Q ss_pred EEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhh----hhcCCCCCcc-hhhhh-------ccCCCCC-cCCCCCC
Q 004149 618 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL----MVGTTDIPDW-CYVES-------YGSKGKD-SFTESPS 684 (771)
Q Consensus 618 i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~----~~~~~~~~~~-~~~~~-------~~~~~~~-~~~~~~~ 684 (771)
+.|+||||||.+++.++.++|++++++|+.++...... +......... ..... +...... .+.....
T Consensus 92 ~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (271)
T 1wom_A 92 TVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPDR 171 (271)
T ss_dssp EEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCTTC
T ss_pred eEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999999999887521100 0000000000 00000 0000000 0000000
Q ss_pred hhhHH----H---------------HhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCC
Q 004149 685 VEDLT----R---------------FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPND 745 (771)
Q Consensus 685 ~~~~~----~---------------~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~ 745 (771)
..... . ....+....+.++++|+|+++|++|..+|++.++.+.+.+. ..++++++++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~~ 247 (271)
T 1wom_A 172 PEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLP----YSSLKQMEAR 247 (271)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHSS----SEEEEEEEEE
T ss_pred hHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHCC----CCEEEEeCCC
Confidence 00000 0 01112223467899999999999999999888777766654 3799999999
Q ss_pred CccCCCCCChHHHHHHHHHHHHHHh
Q 004149 746 VHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 746 ~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
||.... +...++.+.+.+|+++++
T Consensus 248 gH~~~~-e~p~~~~~~i~~fl~~~~ 271 (271)
T 1wom_A 248 GHCPHM-SHPDETIQLIGDYLKAHV 271 (271)
T ss_dssp SSCHHH-HCHHHHHHHHHHHHHHHC
T ss_pred CcCccc-cCHHHHHHHHHHHHHhcC
Confidence 997653 345678899999998864
No 197
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=99.66 E-value=2.4e-16 Score=162.67 Aligned_cols=227 Identities=11% Similarity=0.041 Sum_probs=135.6
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
.-+|..+++..+. ..|+||++||++.+ ...|...+..|++. |.|+++|+||.+ .+... ...
T Consensus 16 ~~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~L~~~-~~vi~~D~~G~G---~S~~~-----~~~ 76 (301)
T 3kda_A 16 EVDGVKLHYVKGG--------QGPLVMLVHGFGQT--WYEWHQLMPELAKR-FTVIAPDLPGLG---QSEPP-----KTG 76 (301)
T ss_dssp EETTEEEEEEEEE--------SSSEEEEECCTTCC--GGGGTTTHHHHTTT-SEEEEECCTTST---TCCCC-----SSC
T ss_pred eeCCeEEEEEEcC--------CCCEEEEECCCCcc--hhHHHHHHHHHHhc-CeEEEEcCCCCC---CCCCC-----CCC
Confidence 3367777765543 34789999998765 45677788888887 999999999954 43211 122
Q ss_pred cchhhHHHHHHHHHHcCCCCCCe-EEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCC------CCCcchh
Q 004149 595 QDVNDVLTAIDHVIDMGLANPSK-VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT------DIPDWCY 667 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~r-i~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~------~~~~~~~ 667 (771)
...+++.+.+..+++. ++.++ +.|+||||||.+++.++.++|++++++|+.+|........... ....|..
T Consensus 77 ~~~~~~~~~l~~~l~~--l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (301)
T 3kda_A 77 YSGEQVAVYLHKLARQ--FSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHF 154 (301)
T ss_dssp SSHHHHHHHHHHHHHH--HCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHH
T ss_pred ccHHHHHHHHHHHHHH--cCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhhH
Confidence 2455555555555443 23456 9999999999999999999999999999999863211110000 0000100
Q ss_pred ---------hhhccC--------CCCCcCCC---CCChhhHHHHhh-------------------------cCccccccC
Q 004149 668 ---------VESYGS--------KGKDSFTE---SPSVEDLTRFHS-------------------------KSPISHISK 702 (771)
Q Consensus 668 ---------~~~~~~--------~~~~~~~~---~~~~~~~~~~~~-------------------------~sp~~~~~~ 702 (771)
...... ........ ....+....+.. ......+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 234 (301)
T 3kda_A 155 SFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTRLQ 234 (301)
T ss_dssp HHHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHHHHTTSCBC
T ss_pred HHhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccchhhcccchhhccc
Confidence 000000 00000000 000111111100 000112338
Q ss_pred CCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHH
Q 004149 703 VKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 703 i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 769 (771)
+++|+|+++|++| +++.....+.+. ..++++++++++||.+. .+...++.+.|.+|+++.
T Consensus 235 i~~P~l~i~G~~D--~~~~~~~~~~~~----~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~~l~~~ 294 (301)
T 3kda_A 235 MPTMTLAGGGAGG--MGTFQLEQMKAY----AEDVEGHVLPGCGHWLP-EECAAPMNRLVIDFLSRG 294 (301)
T ss_dssp SCEEEEEECSTTS--CTTHHHHHHHTT----BSSEEEEEETTCCSCHH-HHTHHHHHHHHHHHHTTS
T ss_pred cCcceEEEecCCC--CChhHHHHHHhh----cccCeEEEcCCCCcCch-hhCHHHHHHHHHHHHhhC
Confidence 8999999999999 665655554433 34589999999999875 344567888888888653
No 198
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}
Probab=99.66 E-value=1.9e-15 Score=144.75 Aligned_cols=171 Identities=12% Similarity=0.121 Sum_probs=121.5
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004149 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
+.|.||++||.+.... ..|...+..+...+ +.++++| ++ ....+++.+.+..+.+.. +
T Consensus 16 ~~~~vv~~HG~~~~~~-~~~~~~~~~~~~~~---~~v~~~~---~~------------~~~~~~~~~~~~~~~~~~--~- 73 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDD-EHWQSHWERRFPHW---QRIRQRE---WY------------QADLDRWVLAIRRELSVC--T- 73 (191)
T ss_dssp TTCEEEEECCTTCCCT-TSHHHHHHHHCTTS---EECCCSC---CS------------SCCHHHHHHHHHHHHHTC--S-
T ss_pred CCceEEEECCCCCCch-hhHHHHHHHhcCCe---EEEeccC---CC------------CcCHHHHHHHHHHHHHhc--C-
Confidence 4588999999775531 34544444333333 4556666 21 123556666666665542 3
Q ss_pred CeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcC
Q 004149 616 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKS 695 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 695 (771)
+++.|+|||+||.+++.++.++|++++++|+.+|....... + +.
T Consensus 74 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~--------------~-----------~~----------- 117 (191)
T 3bdv_A 74 QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFE--------------I-----------DD----------- 117 (191)
T ss_dssp SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGT--------------C-----------TT-----------
T ss_pred CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCcccccc--------------C-----------cc-----------
Confidence 78999999999999999999999999999999997643210 0 00
Q ss_pred ccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCC--CChHHHHHHHHHHHHHHh
Q 004149 696 PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERP--QSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 696 p~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~--~~~~~~~~~i~~wl~~~l 770 (771)
...+.++++|+|+++|++|..+|++.++.+.+.+ +++++++++++|.+... ....+.++.+.+||++..
T Consensus 118 -~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~~ 188 (191)
T 3bdv_A 118 -RIQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW-----DSELVDVGEAGHINAEAGFGPWEYGLKRLAEFSEILI 188 (191)
T ss_dssp -TSCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH-----TCEEEECCSCTTSSGGGTCSSCHHHHHHHHHHHHTTC
T ss_pred -ccccccCCCCEEEEecCCCCcCCHHHHHHHHHhc-----CCcEEEeCCCCcccccccchhHHHHHHHHHHHHHHhc
Confidence 0335678899999999999999999999988876 27899999999987542 133456688888987653
No 199
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.66 E-value=2.2e-15 Score=174.94 Aligned_cols=270 Identities=13% Similarity=0.102 Sum_probs=168.5
Q ss_pred ceEEEeCCCCCeEEEEecCCCC-CCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004149 101 ASAVVPSPSGSKLLVVRNPENE-SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
...+.++|||++++|+++..+. ...+|.+. .++..+.+++...-..+. ...+.+++|||||++|||......
T Consensus 70 ~~~~~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~---~~~~~~~~~SPDG~~la~~~~~~G--- 143 (695)
T 2bkl_A 70 DSVSTPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDG---TVSLGTWAVSWDGKKVAFAQKPNA--- 143 (695)
T ss_dssp CEECCCEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSS---CEEEEEEEECTTSSEEEEEEEETT---
T ss_pred ccCCCCEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCC---CEEEEEEEECCCCCEEEEEECCCC---
Confidence 3455667999999999887632 45678887 567777777653211000 012368999999999999876431
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEE
Q 004149 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 258 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l 258 (771)
.....|+++|+++|+..... .........++|||||+. |
T Consensus 144 ------------------------------------~~~~~i~v~dl~tg~~~~~~-~~~~~~~~~~~wspDg~~----l 182 (695)
T 2bkl_A 144 ------------------------------------ADEAVLHVIDVDSGEWSKVD-VIEGGKYATPKWTPDSKG----F 182 (695)
T ss_dssp ------------------------------------CSCCEEEEEETTTCCBCSSC-CBSCCTTCCCEECTTSSE----E
T ss_pred ------------------------------------CceEEEEEEECCCCCCcCCc-ccCcccccceEEecCCCE----E
Confidence 13479999999999875111 111222368999999999 9
Q ss_pred EEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc--eecCCC---CccccceeecCCCCEEEE
Q 004149 259 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--VNLTES---ISSAFFPRFSPDGKFLVF 333 (771)
Q Consensus 259 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~lt~~---~~~~~~p~~SpDG~~l~f 333 (771)
+|++...... +.....++..+||++++ .++.. +.+... .....++.|||||++|++
T Consensus 183 ~~~~~d~~~~--~~~~~~~~~~~v~~~~l-----------------~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~ 243 (695)
T 2bkl_A 183 YYEWLPTDPS--IKVDERPGYTTIRYHTL-----------------GTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFV 243 (695)
T ss_dssp EEEECCCCTT--SCGGGGGGGCEEEEEET-----------------TSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEE
T ss_pred EEEEecCCCC--CccccCCCCCEEEEEEC-----------------CCCchhceEEEecCCCCEEEEEEEECCCCCEEEE
Confidence 9998543200 00011134558999998 54442 233322 235678999999999999
Q ss_pred EecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeC-Ce
Q 004149 334 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG-SS 412 (771)
Q Consensus 334 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~-~~ 412 (771)
.+.+.. ...+||+++..+++.+.++.... ....+.| +||+ |++.++.+ ..
T Consensus 244 ~~~~~~-------~~~~l~~~~~~~~~~~~l~~~~~--------------------~~~~~~~-~~g~-l~~~s~~~~~~ 294 (695)
T 2bkl_A 244 YILRGW-------SENDVYWKRPGEKDFRLLVKGVG--------------------AKYEVHA-WKDR-FYVLTDEGAPR 294 (695)
T ss_dssp EEEETT-------TEEEEEEECTTCSSCEEEEECSS--------------------CCEEEEE-ETTE-EEEEECTTCTT
T ss_pred EEeCCC-------CceEEEEEcCCCCceEEeecCCC--------------------ceEEEEe-cCCc-EEEEECCCCCC
Confidence 987641 25689999876655444322110 1112334 7888 88877644 46
Q ss_pred eEEEEEECCCCcE---EEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEec
Q 004149 413 QVIISVNVSSGEL---LRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 413 ~~l~~~d~~tg~~---~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~ 466 (771)
..|+.+++++++. +.+...........++..++.++++... +...+|++.++.
T Consensus 295 ~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~-dg~~~l~~~~~~ 350 (695)
T 2bkl_A 295 QRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLK-DATSEVRVATLK 350 (695)
T ss_dssp CEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEE-TTEEEEEEEETT
T ss_pred CEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEE-CCEEEEEEEeCC
Confidence 7899999988763 6666543221222333346777766643 334567777753
No 200
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=99.66 E-value=2.6e-15 Score=156.11 Aligned_cols=118 Identities=18% Similarity=0.278 Sum_probs=78.7
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|..+++...-++ ..|.||++||+++...... ....+...||.|+++|+|| +|.+... .......
T Consensus 20 ~g~~l~y~~~G~~------~g~pvvllHG~~~~~~~~~---~~~~~~~~~~~vi~~D~~G---~G~S~~~---~~~~~~~ 84 (313)
T 1azw_A 20 DRHTLYFEQCGNP------HGKPVVMLHGGPGGGCNDK---MRRFHDPAKYRIVLFDQRG---SGRSTPH---ADLVDNT 84 (313)
T ss_dssp SSCEEEEEEEECT------TSEEEEEECSTTTTCCCGG---GGGGSCTTTEEEEEECCTT---STTSBST---TCCTTCC
T ss_pred CCCEEEEEecCCC------CCCeEEEECCCCCccccHH---HHHhcCcCcceEEEECCCC---CcCCCCC---ccccccc
Confidence 5666765544321 2366999999765432211 1233445799999999999 5544211 1111223
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCcc
Q 004149 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 651 (771)
.+++.+.+..+++. ++.+++.|+||||||.+++.++.++|++++++|+.++..
T Consensus 85 ~~~~~~dl~~l~~~--l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~~ 137 (313)
T 1azw_A 85 TWDLVADIERLRTH--LGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFL 137 (313)
T ss_dssp HHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred HHHHHHHHHHHHHH--hCCCceEEEEECHHHHHHHHHHHhChhheeEEEEecccc
Confidence 55555555555555 234689999999999999999999999999999987653
No 201
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=99.65 E-value=1.1e-15 Score=144.99 Aligned_cols=169 Identities=16% Similarity=0.085 Sum_probs=122.6
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCc---EEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCC
Q 004149 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGY---SLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 613 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~---~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~ 613 (771)
.|+||++||.+.. ...|...+..|+++|| .|+++|+||.+.... ...+++.+.+..+.+. .
T Consensus 3 ~~~vv~~HG~~~~--~~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~------------~~~~~~~~~~~~~~~~--~ 66 (181)
T 1isp_A 3 HNPVVMVHGIGGA--SFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNY------------NNGPVLSRFVQKVLDE--T 66 (181)
T ss_dssp CCCEEEECCTTCC--GGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHH------------HHHHHHHHHHHHHHHH--H
T ss_pred CCeEEEECCcCCC--HhHHHHHHHHHHHcCCCCccEEEEecCCCCCchh------------hhHHHHHHHHHHHHHH--c
Confidence 4779999997655 4568888899999998 699999999443211 2345566666655554 2
Q ss_pred CCCeEEEEEcChhHHHHHHHHHhC--CCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCCcCCCCCChhhHHHH
Q 004149 614 NPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRF 691 (771)
Q Consensus 614 d~~ri~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (771)
+.+++.|+||||||.+++.++.++ |++++++|+.+|....... . .+ +.
T Consensus 67 ~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~------------~--------~~---~~------- 116 (181)
T 1isp_A 67 GAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG------------K--------AL---PG------- 116 (181)
T ss_dssp CCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS------------B--------CC---CC-------
T ss_pred CCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccc------------c--------cC---CC-------
Confidence 457899999999999999999988 8899999999987542110 0 00 00
Q ss_pred hhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHH
Q 004149 692 HSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 692 ~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 769 (771)
. ....++|+|+++|++|.++|++.+. -...+++++++++|.+.... . ++.+.+.+||++.
T Consensus 117 --~-----~~~~~~p~l~i~G~~D~~v~~~~~~---------~~~~~~~~~~~~gH~~~~~~-~-~~~~~i~~fl~~~ 176 (181)
T 1isp_A 117 --T-----DPNQKILYTSIYSSADMIVMNYLSR---------LDGARNVQIHGVGHIGLLYS-S-QVNSLIKEGLNGG 176 (181)
T ss_dssp --S-----CTTCCCEEEEEEETTCSSSCHHHHC---------CBTSEEEEESSCCTGGGGGC-H-HHHHHHHHHHTTT
T ss_pred --C-----CCccCCcEEEEecCCCccccccccc---------CCCCcceeeccCchHhhccC-H-HHHHHHHHHHhcc
Confidence 0 0123579999999999999987432 23478899999999876444 3 7889999998753
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.65 E-value=4e-15 Score=173.98 Aligned_cols=270 Identities=12% Similarity=0.115 Sum_probs=169.9
Q ss_pred ceEEEeCCCCCeEEEEecCCCC-CCeEEEEe-c---CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCC
Q 004149 101 ASAVVPSPSGSKLLVVRNPENE-SPIQFELW-S---QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 175 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~-~~~~~~~~-~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~ 175 (771)
...+.++|||++++|+++..+. ...+|.+. . ++..+.+++...-..+. +..+.+++|||||++|||......
T Consensus 109 ~~~~~p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~---~~~~~~~~~SPDG~~la~~~~~~G 185 (741)
T 1yr2_A 109 ERFGLPQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDG---ATALDAWAASDDGRLLAYSVQDGG 185 (741)
T ss_dssp CEECCCEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC-------EEEEEEEECTTSSEEEEEEEETT
T ss_pred cccCCCEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCC---CEEEEeEEECCCCCEEEEEEcCCC
Confidence 4455667999999999986532 46778887 4 56667776653211100 012368999999999999876531
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCc
Q 004149 176 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLH 255 (771)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~ 255 (771)
....+|+++|+++|+.... .........++|||| +.
T Consensus 186 ---------------------------------------~e~~~i~v~dl~tg~~~~~--~~~~~~~~~~~wspD-~~-- 221 (741)
T 1yr2_A 186 ---------------------------------------SDWRTVKFVGVADGKPLAD--ELKWVKFSGLAWLGN-DA-- 221 (741)
T ss_dssp ---------------------------------------CSEEEEEEEETTTCCEEEE--EEEEEESCCCEESTT-SE--
T ss_pred ---------------------------------------CceEEEEEEECCCCCCCCc--cCCCceeccEEEECC-CE--
Confidence 1236899999999987665 222223467899999 98
Q ss_pred cEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc--eecCCCC---ccccceeecCCCCE
Q 004149 256 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--VNLTESI---SSAFFPRFSPDGKF 330 (771)
Q Consensus 256 ~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~lt~~~---~~~~~p~~SpDG~~ 330 (771)
|+|++..... +.+.....++..+||++++ .++.. +.+.... ....++.|||||++
T Consensus 222 --l~~~~~~~~~-~~~~~~~~~~~~~v~~~~l-----------------gt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~ 281 (741)
T 1yr2_A 222 --LLYSRFAEPK-EGQAFQALNYNQTVWLHRL-----------------GTPQSADQPVFATPELPKRGHGASVSSDGRW 281 (741)
T ss_dssp --EEEEECCCC---------CCCCCEEEEEET-----------------TSCGGGCEEEECCTTCTTCEEEEEECTTSCE
T ss_pred --EEEEEecCcc-cccccccCCCCCEEEEEEC-----------------CCCchhCEEEeccCCCCeEEEEEEECCCCCE
Confidence 9998753321 1111122344568999998 44432 2232222 23678999999999
Q ss_pred EEEEecCCCCCCCCccccccceeeecCCC--C-CCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEe
Q 004149 331 LVFLSAKSSVDSGAHSATDSLHRIDWPTN--G-NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 407 (771)
Q Consensus 331 l~f~~~~~~~~~g~~~~~~~l~~~d~~~~--~-~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~ 407 (771)
|+|.+.+.. ....+||++|+.++ + .+.++... +. . ...+++||+.|++.+
T Consensus 282 l~~~~~~~~------~~~~~l~~~d~~~~~~~~~~~l~~~~-----------~~---------~-~~~~~~dg~~l~~~s 334 (741)
T 1yr2_A 282 VVITSSEGT------DPVNTVHVARVTNGKIGPVTALIPDL-----------KA---------Q-WDFVDGVGDQLWFVS 334 (741)
T ss_dssp EEEEEECTT------CSCCEEEEEEEETTEECCCEEEECSS-----------SS---------C-EEEEEEETTEEEEEE
T ss_pred EEEEEEccC------CCcceEEEEECCCCCCcccEEecCCC-----------Cc---------e-EEEEeccCCEEEEEE
Confidence 999987641 12568999999876 3 33332111 00 1 112568999999988
Q ss_pred eeCC-eeEEEEEECCCC--cEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEec
Q 004149 408 IWGS-SQVIISVNVSSG--ELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 408 ~~~~-~~~l~~~d~~tg--~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~ 466 (771)
+.+. ..+|+.++++++ +.+.++..... ....++..++.++++.... .-.+|++.++.
T Consensus 335 ~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~-~l~~~~~~~~~lv~~~~~d-g~~~l~~~~~~ 394 (741)
T 1yr2_A 335 GDGAPLKKIVRVDLSGSTPRFDTVVPESKD-NLESVGIAGNRLFASYIHD-AKSQVLAFDLD 394 (741)
T ss_dssp CTTCTTCEEEEEECSSSSCEEEEEECCCSS-EEEEEEEEBTEEEEEEEET-TEEEEEEEETT
T ss_pred CCCCCCCEEEEEeCCCCccccEEEecCCCC-eEEEEEEECCEEEEEEEEC-CEEEEEEEeCC
Confidence 7544 678999999884 56777655432 2233455577777776543 33567777753
No 203
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=99.65 E-value=2.8e-16 Score=159.11 Aligned_cols=217 Identities=15% Similarity=0.124 Sum_probs=130.5
Q ss_pred CCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCC
Q 004149 534 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 613 (771)
Q Consensus 534 ~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~ 613 (771)
..+.|+||++||++.. ...|...+..|++ +|.|+++|+|| +|.+... .....++++.+.+..+++. .
T Consensus 17 ~~~~~~vv~~HG~~~~--~~~~~~~~~~l~~-~~~v~~~d~~G---~G~s~~~-----~~~~~~~~~~~~~~~~l~~--~ 83 (267)
T 3fla_A 17 PDARARLVCLPHAGGS--ASFFFPLAKALAP-AVEVLAVQYPG---RQDRRHE-----PPVDSIGGLTNRLLEVLRP--F 83 (267)
T ss_dssp TTCSEEEEEECCTTCC--GGGGHHHHHHHTT-TEEEEEECCTT---SGGGTTS-----CCCCSHHHHHHHHHHHTGG--G
T ss_pred CCCCceEEEeCCCCCC--chhHHHHHHHhcc-CcEEEEecCCC---CCCCCCC-----CCCcCHHHHHHHHHHHHHh--c
Confidence 4567999999997664 4577778888865 49999999999 5554321 1122455555555554444 2
Q ss_pred CCCeEEEEEcChhHHHHHHHHHhCCCc----eeEEEecCCccchhhhhcC-CCCCcchhhhhccCCC-C-CcCCCCCC--
Q 004149 614 NPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGT-TDIPDWCYVESYGSKG-K-DSFTESPS-- 684 (771)
Q Consensus 614 d~~ri~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~-~-~~~~~~~~-- 684 (771)
+.+++.|+|||+||.+++.++.++|++ ++++++.++.......... .......+...+.... . ......+.
T Consensus 84 ~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (267)
T 3fla_A 84 GDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSDAAMLADPELL 163 (267)
T ss_dssp TTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHHHHHHHSHHHH
T ss_pred CCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcchhhccCHHHH
Confidence 457899999999999999999999986 8888887765321111000 0000000000000000 0 00000000
Q ss_pred -------hhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHH
Q 004149 685 -------VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFE 757 (771)
Q Consensus 685 -------~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~ 757 (771)
...........+.. ...+++|+|+++|++|..+|++.+..+.+.+.. +++++++++ +|.+.. +...+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~g-gH~~~~-~~~~~ 237 (267)
T 3fla_A 164 AMVLPAIRSDYRAVETYRHEP-GRRVDCPVTVFTGDHDPRVSVGEARAWEEHTTG---PADLRVLPG-GHFFLV-DQAAP 237 (267)
T ss_dssp HHHHHHHHHHHHHHHHCCCCT-TCCBSSCEEEEEETTCTTCCHHHHHGGGGGBSS---CEEEEEESS-STTHHH-HTHHH
T ss_pred HHHHHHHHHHHHhhhcccccc-cCcCCCCEEEEecCCCCCCCHHHHHHHHHhcCC---CceEEEecC-Cceeec-cCHHH
Confidence 00000111111111 156889999999999999998877776655432 489999998 997653 34567
Q ss_pred HHHHHHHHHHHH
Q 004149 758 SFLNIGLWFKKY 769 (771)
Q Consensus 758 ~~~~i~~wl~~~ 769 (771)
+.+.+.+||++.
T Consensus 238 ~~~~i~~fl~~~ 249 (267)
T 3fla_A 238 MIATMTEKLAGP 249 (267)
T ss_dssp HHHHHHHHTC--
T ss_pred HHHHHHHHhccc
Confidence 788888888654
No 204
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=99.64 E-value=1.4e-15 Score=151.81 Aligned_cols=203 Identities=17% Similarity=0.125 Sum_probs=126.7
Q ss_pred CCcEEEEEcCCCCCCCCCcch----HHHHHHHHCCcEEEEECCCCCCC------------------CCh--hhhhcCCCC
Q 004149 536 CDPLIVVLHGGPHSVSLSSYS----KSLAFLSSVGYSLLIVNYRGSLG------------------FGE--EALQSLPGK 591 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~----~~~~~la~~G~~V~~~d~rG~~~------------------~g~--~~~~~~~~~ 591 (771)
+.|.||++||.+.+. ..|. .+...|.++||.|+.+|+|+... +|. .|.. .
T Consensus 4 ~~~~vl~lHG~g~~~--~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~----~ 77 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNG--KVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFY----H 77 (243)
T ss_dssp CCCEEEEECCTTCCH--HHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSC----C
T ss_pred cCceEEEeCCCCccH--HHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCccccc----C
Confidence 468999999976542 2333 35566777799999999993211 111 1110 0
Q ss_pred ccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCC------CceeEEEecCCccchhhhhcCCCCCcc
Q 004149 592 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP------DKFVAAAARNPLCNLALMVGTTDIPDW 665 (771)
Q Consensus 592 ~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p------~~~~a~v~~~p~~~~~~~~~~~~~~~~ 665 (771)
.......|+.++++++.+....+..+++|+||||||.+|+.++.+++ ..++++++.++........ ...
T Consensus 78 ~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~---~~~-- 152 (243)
T 1ycd_A 78 SEISHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDP---EHP-- 152 (243)
T ss_dssp CSSGGGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECT---TST--
T ss_pred CCCcchhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCccc---ccc--
Confidence 11123456666666666532223468999999999999999998642 2466777776654221100 000
Q ss_pred hhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCC---CCEEEEEe
Q 004149 666 CYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG---VETKVIVF 742 (771)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g---~~~~~~~~ 742 (771)
+. . .+ .. .+ ......+.++++|+|++||++|.++|+++++.+++.+...+ .....+++
T Consensus 153 ------~~--~-~~-----~~---~~--~~~~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~ 213 (243)
T 1ycd_A 153 ------GE--L-RI-----TE---KF--RDSFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYE 213 (243)
T ss_dssp ------TC--E-EE-----CG---GG--TTTTCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEE
T ss_pred ------cc--c-cc-----ch---hH--HHhccCcccCCCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccccccEEEe
Confidence 00 0 00 00 00 01122345688999999999999999999999999998741 11234456
Q ss_pred CCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 743 PNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 743 ~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
++++|.+... ..+++.+.+||+++++
T Consensus 214 ~~~gH~~~~~---~~~~~~i~~fl~~~~~ 239 (243)
T 1ycd_A 214 HPGGHMVPNK---KDIIRPIVEQITSSLQ 239 (243)
T ss_dssp ESSSSSCCCC---HHHHHHHHHHHHHHHC
T ss_pred cCCCCcCCch---HHHHHHHHHHHHHhhh
Confidence 6789987533 3588999999998764
No 205
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=99.64 E-value=3.9e-16 Score=161.18 Aligned_cols=229 Identities=11% Similarity=0.039 Sum_probs=138.9
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
..+|.++....+. +.|+||++||.+.. ...|...+..|++. |.|+++|+||.+ .+..... .....
T Consensus 15 ~~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~L~~~-~~vi~~D~~G~G---~S~~~~~-~~~~~ 79 (302)
T 1mj5_A 15 EIKGRRMAYIDEG--------TGDPILFQHGNPTS--SYLWRNIMPHCAGL-GRLIACDLIGMG---DSDKLDP-SGPER 79 (302)
T ss_dssp EETTEEEEEEEES--------CSSEEEEECCTTCC--GGGGTTTGGGGTTS-SEEEEECCTTST---TSCCCSS-CSTTS
T ss_pred EECCEEEEEEEcC--------CCCEEEEECCCCCc--hhhhHHHHHHhccC-CeEEEEcCCCCC---CCCCCCC-CCccc
Confidence 3457777655442 14889999997765 34566666777654 899999999944 4321110 01111
Q ss_pred cchhhHHHHHHHHHHcCCCCC-CeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCC----------C
Q 004149 595 QDVNDVLTAIDHVIDMGLANP-SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDI----------P 663 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~-~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~----------~ 663 (771)
...+++.+.+..+++. ++. +++.|+|||+||.+++.++.++|++++++|+.+|............. +
T Consensus 80 ~~~~~~~~~~~~~l~~--l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (302)
T 1mj5_A 80 YAYAEHRDYLDALWEA--LDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQ 157 (302)
T ss_dssp SCHHHHHHHHHHHHHH--TTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHST
T ss_pred ccHHHHHHHHHHHHHH--hCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHHhcc
Confidence 3456666666655555 234 78999999999999999999999999999999886531100000000 0
Q ss_pred -cc-------hhhhhccCCCCCcCCCCCChhhH-----------------HH-Hhhc--------------CccccccCC
Q 004149 664 -DW-------CYVESYGSKGKDSFTESPSVEDL-----------------TR-FHSK--------------SPISHISKV 703 (771)
Q Consensus 664 -~~-------~~~~~~~~~~~~~~~~~~~~~~~-----------------~~-~~~~--------------sp~~~~~~i 703 (771)
.. .+...+... ........+.. .. +... +....+.++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 234 (302)
T 1mj5_A 158 AGEELVLQDNVFVEQVLPG---LILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSES 234 (302)
T ss_dssp THHHHHTTTCHHHHTHHHH---TSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTC
T ss_pred chhhhhcChHHHHHHHHHh---cCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhhcc
Confidence 00 000000000 00000000000 00 0010 112346778
Q ss_pred CCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHh
Q 004149 704 KTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 704 ~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
++|+|+++|++|.++|++.++.+.+.+ .. +++++ ++||.+.. +...++.+.+.+|+++..
T Consensus 235 ~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~-~~~~~-~~gH~~~~-e~p~~~~~~i~~fl~~~~ 294 (302)
T 1mj5_A 235 PIPKLFINAEPGALTTGRMRDFCRTWP----NQ-TEITV-AGAHFIQE-DSPDEIGAAIAAFVRRLR 294 (302)
T ss_dssp CSCEEEEEEEECSSSSHHHHHHHTTCS----SE-EEEEE-EESSCGGG-TCHHHHHHHHHHHHHHHS
T ss_pred CCCeEEEEeCCCCCCChHHHHHHHHhc----CC-ceEEe-cCcCcccc-cCHHHHHHHHHHHHHhhc
Confidence 999999999999999987776665544 23 78888 99998664 446688899999998753
No 206
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=99.64 E-value=5.7e-16 Score=156.55 Aligned_cols=226 Identities=11% Similarity=0.108 Sum_probs=132.1
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|.++++....+ ...|+||++||.+.+ ...|...+..|++ +|.|+++|+|| +|.+... .....
T Consensus 7 ~g~~l~~~~~g~------~~~~~vv~lHG~~~~--~~~~~~~~~~L~~-~~~v~~~D~~G---~G~S~~~-----~~~~~ 69 (264)
T 3ibt_A 7 NGTLMTYSESGD------PHAPTLFLLSGWCQD--HRLFKNLAPLLAR-DFHVICPDWRG---HDAKQTD-----SGDFD 69 (264)
T ss_dssp TTEECCEEEESC------SSSCEEEEECCTTCC--GGGGTTHHHHHTT-TSEEEEECCTT---CSTTCCC-----CSCCC
T ss_pred CCeEEEEEEeCC------CCCCeEEEEcCCCCc--HhHHHHHHHHHHh-cCcEEEEcccc---CCCCCCC-----ccccC
Confidence 456666554433 235789999997765 3467778888854 59999999999 4444221 12234
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhC-CCceeEEEecCCccchh-----hhhcCCCCCcchh---
Q 004149 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLA-----LMVGTTDIPDWCY--- 667 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~p~~~~~-----~~~~~~~~~~~~~--- 667 (771)
.+++.+.+..+++. .+.+++.|+|||+||.+++.++.++ |++++++|+.+|..... .+........+..
T Consensus 70 ~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (264)
T 3ibt_A 70 SQTLAQDLLAFIDA--KGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQLAEGQHPTEYVAGRQ 147 (264)
T ss_dssp HHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSSCCHHHHHHHHHTTCTTTHHHHHH
T ss_pred HHHHHHHHHHHHHh--cCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCCcChhhcchhhcccChhhHHHHHH
Confidence 55555555555554 2456899999999999999999999 99999999998765110 0000000000100
Q ss_pred --hhhc-cCCC--------CCcCCCCCChhhHH----HH-----hhcCccccccCCCCcEEEEeeCCCC--ccCcHHHHH
Q 004149 668 --VESY-GSKG--------KDSFTESPSVEDLT----RF-----HSKSPISHISKVKTPTIFLLGAQDL--RVPVSNGLQ 725 (771)
Q Consensus 668 --~~~~-~~~~--------~~~~~~~~~~~~~~----~~-----~~~sp~~~~~~i~~P~Lii~G~~D~--~vp~~~~~~ 725 (771)
...+ .... ...+.. ....... .+ ...++...+.++++|+|+++|..|. .+++.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~~~~~~ 226 (264)
T 3ibt_A 148 SFFDEWAETTDNADVLNHLRNEMPW-FHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQLQLE 226 (264)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHTGGG-SCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHHHHHHH
T ss_pred HHHHHhcccCCcHHHHHHHHHhhhh-ccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchhhHHHHHH
Confidence 0000 0000 000000 0000000 00 0112235567899999999864444 333444444
Q ss_pred HHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004149 726 YARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 726 ~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 767 (771)
+.+. -...++++++++||... .+...++.+.|.+||+
T Consensus 227 ~~~~----~~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 227 FAAG----HSWFHPRHIPGRTHFPS-LENPVAVAQAIREFLQ 263 (264)
T ss_dssp HHHH----CTTEEEEECCCSSSCHH-HHCHHHHHHHHHHHTC
T ss_pred HHHh----CCCceEEEcCCCCCcch-hhCHHHHHHHHHHHHh
Confidence 4443 33589999999999765 3345577778888874
No 207
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=99.63 E-value=1.6e-15 Score=156.92 Aligned_cols=216 Identities=12% Similarity=0.067 Sum_probs=132.6
Q ss_pred CCCCcEEEEEcCCCCCCCCCcchHHHHHHHHC--CcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcC
Q 004149 534 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV--GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG 611 (771)
Q Consensus 534 ~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~--G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~ 611 (771)
.+..|.||++||.+.. ...|...+..|+++ ||.|+++|+|| +|.+... ....++++.+.+..+.+..
T Consensus 33 ~~~~~~vvllHG~~~~--~~~~~~~~~~L~~~~~g~~vi~~D~~G---~G~s~~~------~~~~~~~~~~~l~~~~~~~ 101 (302)
T 1pja_A 33 RASYKPVIVVHGLFDS--SYSFRHLLEYINETHPGTVVTVLDLFD---GRESLRP------LWEQVQGFREAVVPIMAKA 101 (302)
T ss_dssp --CCCCEEEECCTTCC--GGGGHHHHHHHHHHSTTCCEEECCSSC---SGGGGSC------HHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCeEEEECCCCCC--hhHHHHHHHHHHhcCCCcEEEEeccCC---Cccchhh------HHHHHHHHHHHHHHHhhcC
Confidence 3456789999997665 44688889999988 99999999999 4544311 1134667777777766653
Q ss_pred CCCCCeEEEEEcChhHHHHHHHHHhCCC-ceeEEEecCCccchhhh----h--cCCCCCcchhhh-hccC----CCCCcC
Q 004149 612 LANPSKVTVVGGSHGGFLTTHLIGQAPD-KFVAAAARNPLCNLALM----V--GTTDIPDWCYVE-SYGS----KGKDSF 679 (771)
Q Consensus 612 ~~d~~ri~l~G~S~GG~~a~~~a~~~p~-~~~a~v~~~p~~~~~~~----~--~~~~~~~~~~~~-~~~~----~~~~~~ 679 (771)
.+++.|+||||||.+++.++.++|+ +++++|+.++....... . ............ .+.. .....+
T Consensus 102 ---~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (302)
T 1pja_A 102 ---PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQEFSICNY 178 (302)
T ss_dssp ---TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHHHHCTTCCHHHHHHHHTSTTGGGSTGGGG
T ss_pred ---CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhhhHHHHHHHHHHhhccchHHHHHhhhhhc
Confidence 4789999999999999999999999 79999998875432100 0 000000000000 0000 000000
Q ss_pred CCCCC-hhhH-------HHHhhcC-------ccccccCCCCcEEEEeeCCCCccCcHHHHHHHH----------------
Q 004149 680 TESPS-VEDL-------TRFHSKS-------PISHISKVKTPTIFLLGAQDLRVPVSNGLQYAR---------------- 728 (771)
Q Consensus 680 ~~~~~-~~~~-------~~~~~~s-------p~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~---------------- 728 (771)
...+. .... ..+.... ....+.+++ |+|+++|++|.++|++.++.+.+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 1pja_A 179 WHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVY 257 (302)
T ss_dssp BCCTTCHHHHHHHCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEECGGGSHHH
T ss_pred ccChhhhhhhhccchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcCCcccccchhhhhhh
Confidence 00111 0000 0000000 123467788 99999999999999988776632
Q ss_pred --------HHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHH
Q 004149 729 --------ALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWF 766 (771)
Q Consensus 729 --------~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl 766 (771)
.+... .++++++++++||..... ....+.+.+.+||
T Consensus 258 ~~~~~~~~~l~~~-~~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl 301 (302)
T 1pja_A 258 LRDSFGLKTLLAR-GAIVRCPMAGISHTAWHS-NRTLYETCIEPWL 301 (302)
T ss_dssp HTTTTSHHHHHHT-TCEEEEECSSCCTTTTTS-CHHHHHHHTGGGC
T ss_pred hhhhhchhhHhhc-CCeEEEEecCcccccccc-CHHHHHHHHHHhc
Confidence 22222 248999999999986643 4556667776665
No 208
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26
Probab=99.63 E-value=3.5e-16 Score=157.75 Aligned_cols=207 Identities=18% Similarity=0.176 Sum_probs=125.7
Q ss_pred EEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCCeE
Q 004149 539 LIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKV 618 (771)
Q Consensus 539 ~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri 618 (771)
.||++||.+.+ ...|...+..|+ .+|.|+++|+|| +|.+... ....+++ .++.+.+. ++ +++
T Consensus 15 ~vvllHG~~~~--~~~w~~~~~~L~-~~~~vi~~Dl~G---~G~S~~~------~~~~~~~---~~~~l~~~--l~-~~~ 76 (258)
T 1m33_A 15 HLVLLHGWGLN--AEVWRCIDEELS-SHFTLHLVDLPG---FGRSRGF------GALSLAD---MAEAVLQQ--AP-DKA 76 (258)
T ss_dssp EEEEECCTTCC--GGGGGGTHHHHH-TTSEEEEECCTT---STTCCSC------CCCCHHH---HHHHHHTT--SC-SSE
T ss_pred eEEEECCCCCC--hHHHHHHHHHhh-cCcEEEEeeCCC---CCCCCCC------CCcCHHH---HHHHHHHH--hC-CCe
Confidence 79999997654 446777777886 589999999999 5544321 1223344 34445443 34 789
Q ss_pred EEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcc---hhh-----------hhccC-CCCC------
Q 004149 619 TVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDW---CYV-----------ESYGS-KGKD------ 677 (771)
Q Consensus 619 ~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~---~~~-----------~~~~~-~~~~------ 677 (771)
.|+||||||.+++.+|.++|++++++|+.++................ .+. ..+.. ....
T Consensus 77 ~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (258)
T 1m33_A 77 IWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQ 156 (258)
T ss_dssp EEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTTHHH
T ss_pred EEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHHHhcCCccchh
Confidence 99999999999999999999999999998764211100000000000 000 00000 0000
Q ss_pred -------cC--CCCCChhhH----HHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCC
Q 004149 678 -------SF--TESPSVEDL----TRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 744 (771)
Q Consensus 678 -------~~--~~~~~~~~~----~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~ 744 (771)
.+ ...+..... ..+...+....+.++++|+|+++|++|..+|++.++.+.+.+. ..+++++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~ 232 (258)
T 1m33_A 157 DARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP----HSESYIFAK 232 (258)
T ss_dssp HHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCT----TCEEEEETT
T ss_pred hHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHHHHHHHHhCc----cceEEEeCC
Confidence 00 000000000 0111222234567889999999999999999887666554432 468999999
Q ss_pred CCccCCCCCChHHHHHHHHHHHHH
Q 004149 745 DVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 745 ~~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
+||..... ...++.+.|.+|+++
T Consensus 233 ~gH~~~~e-~p~~~~~~i~~fl~~ 255 (258)
T 1m33_A 233 AAHAPFIS-HPAEFCHLLVALKQR 255 (258)
T ss_dssp CCSCHHHH-SHHHHHHHHHHHHTT
T ss_pred CCCCcccc-CHHHHHHHHHHHHHh
Confidence 99986543 356788889999864
No 209
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=99.63 E-value=2e-15 Score=158.20 Aligned_cols=207 Identities=14% Similarity=0.148 Sum_probs=125.2
Q ss_pred CCcEEEEEcCCCCCCC-CCcchHHHHHHHHCCcEEEEECC----CCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHc
Q 004149 536 CDPLIVVLHGGPHSVS-LSSYSKSLAFLSSVGYSLLIVNY----RGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDM 610 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~-~~~~~~~~~~la~~G~~V~~~d~----rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~ 610 (771)
..|+||++||.+.... ...|...+..| +.||.|+++|+ || +|.+.. ....+|+.+.++++.+.
T Consensus 37 ~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G---~G~S~~--------~~~~~d~~~~~~~l~~~ 104 (335)
T 2q0x_A 37 ARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIG---SGPQDH--------AHDAEDVDDLIGILLRD 104 (335)
T ss_dssp SSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTT---SCSCCH--------HHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCC---CCCccc--------cCcHHHHHHHHHHHHHH
Confidence 4578999999654322 22345667777 78999999965 66 554321 12367888888888775
Q ss_pred CCCCCCeEEEEEcChhHHHHHHHHH--hCCCceeEEEecCCccchhhhhcCCCCCc--ch----hhhhc---c--CCC--
Q 004149 611 GLANPSKVTVVGGSHGGFLTTHLIG--QAPDKFVAAAARNPLCNLALMVGTTDIPD--WC----YVESY---G--SKG-- 675 (771)
Q Consensus 611 ~~~d~~ri~l~G~S~GG~~a~~~a~--~~p~~~~a~v~~~p~~~~~~~~~~~~~~~--~~----~~~~~---~--~~~-- 675 (771)
.+.+++.|+||||||.+++.++. .+|++++++|+.+|...... ..... +. ..... . ...
T Consensus 105 --l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (335)
T 2q0x_A 105 --HCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPEN----PLFTPEGCAARKEHVEKLMAEGRGEDSLA 178 (335)
T ss_dssp --SCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTS----TTTSHHHHHHHHHHHHHHHHHTCTTCGGG
T ss_pred --cCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchh----cccCHHHHHHHHHHHHHHhhccCcccccc
Confidence 35678999999999999999998 57999999999887643210 00000 00 00000 0 000
Q ss_pred CCcCCCCCC-hhhH---------HHH----h---hcCccccccCCCCcEEEEeeCCCCccCcHHH-HHHHHHHHhCCCCE
Q 004149 676 KDSFTESPS-VEDL---------TRF----H---SKSPISHISKVKTPTIFLLGAQDLRVPVSNG-LQYARALREKGVET 737 (771)
Q Consensus 676 ~~~~~~~~~-~~~~---------~~~----~---~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~-~~~~~~l~~~g~~~ 737 (771)
...+...+. .... ..+ . ..+....+.++++|+|+++|++|.++|++.. ..+.+.+.+.-...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp~~~~~~~~~~~l~~~~~~~ 258 (335)
T 2q0x_A 179 MLKHYDIPITPARLAGGGFPTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKPSDEEVGTVLEGVRDHTGCN 258 (335)
T ss_dssp GTTTCSSCCCHHHHHTCSCSSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTCCCCHHHHHHHHHHHHHHSSSS
T ss_pred chhhccCccCHHHHhhccCCCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCCCChhhhHHHHHHHHHHhcCcc
Confidence 000000000 0000 000 0 0112235678999999999999999998642 23344444332223
Q ss_pred E--------E-----EEeCCCCccCCCCCChHHHHHHHHHHHHHH
Q 004149 738 K--------V-----IVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 738 ~--------~-----~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 769 (771)
+ + .+++++|| +..+.+.+||++.
T Consensus 259 ~~~~~~~~~~~~~~~~~i~~agH---------e~~~~i~~FL~~~ 294 (335)
T 2q0x_A 259 RVTVSYFNDTCDELRRVLKAAES---------EHVAAILQFLADE 294 (335)
T ss_dssp CEEEEECCCEECTTSCEEECCHH---------HHHHHHHHHHHHH
T ss_pred ccccccccchhhhhhcccCCCCC---------HHHHHHHHHHHhh
Confidence 3 5 78999999 3478899999764
No 210
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=99.63 E-value=2.3e-15 Score=152.42 Aligned_cols=210 Identities=16% Similarity=0.209 Sum_probs=123.8
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCC
Q 004149 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 616 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 616 (771)
.|.||++||.+.+ ...|...+..|++.||.|+++|+|| +|.+... ....++++.+.+..+++...++..
T Consensus 16 ~~~vvllHG~~~~--~~~w~~~~~~L~~~~~~vi~~Dl~G---hG~S~~~------~~~~~~~~a~~l~~~l~~l~~~~~ 84 (264)
T 1r3d_A 16 TPLVVLVHGLLGS--GADWQPVLSHLARTQCAALTLDLPG---HGTNPER------HCDNFAEAVEMIEQTVQAHVTSEV 84 (264)
T ss_dssp BCEEEEECCTTCC--GGGGHHHHHHHTTSSCEEEEECCTT---CSSCC-------------CHHHHHHHHHHHTTCCTTS
T ss_pred CCcEEEEcCCCCC--HHHHHHHHHHhcccCceEEEecCCC---CCCCCCC------CccCHHHHHHHHHHHHHHhCcCCC
Confidence 4889999997665 4578888888876899999999999 4444211 012345555555555554323323
Q ss_pred eEEEEEcChhHHHHHH---HHHhCCCceeEEEecCCccchhhhh----cCCCCCcch----------hhhhccCCCCCcC
Q 004149 617 KVTVVGGSHGGFLTTH---LIGQAPDKFVAAAARNPLCNLALMV----GTTDIPDWC----------YVESYGSKGKDSF 679 (771)
Q Consensus 617 ri~l~G~S~GG~~a~~---~a~~~p~~~~a~v~~~p~~~~~~~~----~~~~~~~~~----------~~~~~~~~~~~~~ 679 (771)
++.|+||||||.+++. ++.++|++++++|+.++........ .......|. ....+.. ...+
T Consensus 85 p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 162 (264)
T 1r3d_A 85 PVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQ--QAVF 162 (264)
T ss_dssp EEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTT--SGGG
T ss_pred ceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHHHHHhh--hhhh
Confidence 4999999999999999 8888999999999887643210000 000000000 0000000 0000
Q ss_pred CCCC--------------ChhhHHHHh-h------cCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEE
Q 004149 680 TESP--------------SVEDLTRFH-S------KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 738 (771)
Q Consensus 680 ~~~~--------------~~~~~~~~~-~------~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~ 738 (771)
.... .......+. . ......+.++++|+|+++|++|..++ .+.+.+ . .+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~---~--~~ 232 (264)
T 1r3d_A 163 SSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKFQ-----QLAESS---G--LS 232 (264)
T ss_dssp TTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHHH-----HHHHHH---C--SE
T ss_pred hccCHHHHHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchHH-----HHHHHh---C--Cc
Confidence 0000 000000011 0 11223456789999999999997542 233333 1 56
Q ss_pred EEEeCCCCccCCCCCChHHHHHHHHHHHHHHh
Q 004149 739 VIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 739 ~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
+++++++||.... +...++.+.+.+|++++.
T Consensus 233 ~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~~ 263 (264)
T 1r3d_A 233 YSQVAQAGHNVHH-EQPQAFAKIVQAMIHSII 263 (264)
T ss_dssp EEEETTCCSCHHH-HCHHHHHHHHHHHHHHHC
T ss_pred EEEcCCCCCchhh-cCHHHHHHHHHHHHHHhc
Confidence 8899999998653 345688899999998764
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.62 E-value=2.1e-14 Score=166.18 Aligned_cols=265 Identities=9% Similarity=0.017 Sum_probs=171.0
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCC----
Q 004149 46 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN---- 121 (771)
Q Consensus 46 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~---- 121 (771)
.+++||||++|+|+.+... .....|+++++.++ +..+.+... .....++|| ||+.|+|++..+.
T Consensus 133 ~~~~SpDg~~lAy~~~~~G----~~~~~i~v~dl~tg--~~~~~~~~~-----~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 133 QLSFSRDGRILAYSLSLAG----SDWREIHLMDVESK--QPLETPLKD-----VKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp EEEECTTSSEEEEEEECSS----CCEEEEEEEETTTC--SEEEEEEEE-----EESCCCEEE-TTTEEEEEESSCCC---
T ss_pred EEEECCCCCEEEEEEecCC----CceEEEEEEECCCC--CCCccccCC-----ceeccEEEe-CCCEEEEEEecCccccc
Confidence 3456899999999986532 34578888887443 333332121 113678999 9999999987642
Q ss_pred -----CCCeEEEEecC-Cc--ceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCc
Q 004149 122 -----ESPIQFELWSQ-SQ--LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDK 193 (771)
Q Consensus 122 -----~~~~~~~~~~~-~~--~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (771)
...+++....+ +. .+.+....... +.++.++.|||||++|++.+....
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~------~~~~~~~~~SpDg~~l~~~~~~~~------------------ 256 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQ------HHRYVGATVTEDDRFLLISAANST------------------ 256 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESCSGGG------CCSEEEEEECTTSCEEEEEEESSS------------------
T ss_pred ccccCCCcEEEEEECCCCcccceEEEecCCCC------CeEEEEEEEcCCCCEEEEEEccCC------------------
Confidence 23456655522 22 23333322201 112357899999999999765321
Q ss_pred cCCCCCCcccccCCcCcccCCccCceEEEEEccCC--ceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeee
Q 004149 194 DCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG--EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLG 271 (771)
Q Consensus 194 ~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~--~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g 271 (771)
....||++|++++ +.+.+ +........+ |++||++ |+|.++...
T Consensus 257 ----------------------~~~~i~~~d~~~~~~~~~~l--~~~~~~~~~~-~~~~g~~----l~~~t~~~~----- 302 (693)
T 3iuj_A 257 ----------------------SGNRLYVKDLSQENAPLLTV--QGDLDADVSL-VDNKGST----LYLLTNRDA----- 302 (693)
T ss_dssp ----------------------SCCEEEEEETTSTTCCCEEE--ECSSSSCEEE-EEEETTE----EEEEECTTC-----
T ss_pred ----------------------CCcEEEEEECCCCCCceEEE--eCCCCceEEE-EeccCCE----EEEEECCCC-----
Confidence 2368999999877 56777 3333333333 8999999 999986543
Q ss_pred eeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc---eecCCCCccccceeecCCCCEEEEEecCCCCCCCCcccc
Q 004149 272 IKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV---VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSAT 348 (771)
Q Consensus 272 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~ 348 (771)
.+.+|+.+|+ +++.. +.|+.+..... .|||+|++|++...++ | .
T Consensus 303 ------~~~~l~~~d~-----------------~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~----g----~ 349 (693)
T 3iuj_A 303 ------PNRRLVTVDA-----------------ANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVD----A----T 349 (693)
T ss_dssp ------TTCEEEEEET-----------------TSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEET----T----E
T ss_pred ------CCCEEEEEeC-----------------CCCCccccEEEecCCCCEE--EEEEECCEEEEEEEEC----C----e
Confidence 2348999998 55443 56666554443 9999999999998875 2 4
Q ss_pred ccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeee-CCeeEEEEEECCCCcEEE
Q 004149 349 DSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW-GSSQVIISVNVSSGELLR 427 (771)
Q Consensus 349 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~l~~~d~~tg~~~~ 427 (771)
.+|++++++++..+.+..... ..+..+.+++|++.|++..+. .....||.+|+.+++.+.
T Consensus 350 ~~l~~~d~~g~~~~~l~~p~~-------------------~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~ 410 (693)
T 3iuj_A 350 ARVEQFDYEGKRVREVALPGL-------------------GSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISL 410 (693)
T ss_dssp EEEEEECTTSCEEEEECCSSS-------------------SEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEE
T ss_pred eEEEEEECCCCeeEEeecCCC-------------------ceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEE
Confidence 679999988654332211100 012345678899988887653 344679999999999888
Q ss_pred ecCCC
Q 004149 428 ITPAE 432 (771)
Q Consensus 428 l~~~~ 432 (771)
+....
T Consensus 411 l~~~~ 415 (693)
T 3iuj_A 411 YRASA 415 (693)
T ss_dssp EECCC
T ss_pred EEeCC
Confidence 87544
No 212
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.62 E-value=2.6e-13 Score=142.03 Aligned_cols=267 Identities=12% Similarity=0.093 Sum_probs=161.5
Q ss_pred eEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcc-eEEEecCCcccccc
Q 004149 72 KFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQL-EKEFHVPQTVHGSV 149 (771)
Q Consensus 72 ~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~g~~ 149 (771)
..+.++++.. ++.......+ .... .++|||||+++++..... ..++.++ ..+.. .+.........
T Consensus 20 ~~v~~~d~~~--~~~~~~~~~~----~~~~-~~~~s~dg~~l~~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~--- 86 (331)
T 3u4y_A 20 RRISFFSTDT--LEILNQITLG----YDFV-DTAITSDCSNVVVTSDFC---QTLVQIETQLEPPKVVAIQEGQSSM--- 86 (331)
T ss_dssp TEEEEEETTT--CCEEEEEECC----CCEE-EEEECSSSCEEEEEESTT---CEEEEEECSSSSCEEEEEEECSSCC---
T ss_pred CeEEEEeCcc--cceeeeEEcc----CCcc-eEEEcCCCCEEEEEeCCC---CeEEEEECCCCceeEEecccCCCCc---
Confidence 4677766532 2333222222 1234 889999999887765532 3677777 45554 33333333321
Q ss_pred cCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCc
Q 004149 150 YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE 229 (771)
Q Consensus 150 ~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~ 229 (771)
.+++|||||++|+ ++.... ....|++||+.+++
T Consensus 87 ------~~~~~s~dg~~l~-~~~~~~----------------------------------------~~~~i~v~d~~~~~ 119 (331)
T 3u4y_A 87 ------ADVDITPDDQFAV-TVTGLN----------------------------------------HPFNMQSYSFLKNK 119 (331)
T ss_dssp ------CCEEECTTSSEEE-ECCCSS----------------------------------------SSCEEEEEETTTTE
T ss_pred ------cceEECCCCCEEE-EecCCC----------------------------------------CcccEEEEECCCCC
Confidence 2389999999888 432210 12489999999988
Q ss_pred eeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCce-eEEEecccccchhhhhhhhcCCCCCCc
Q 004149 230 VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCA-LYAVRVSLYKSEASELELKESSSEDLP 308 (771)
Q Consensus 230 ~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~-l~~~d~~~~~~~~~~~~~~~~~~~~~~ 308 (771)
.... .+.......++|+|||+. |++..... .. |++++++ ..+.
T Consensus 120 ~~~~--~~~~~~~~~~~~spdg~~----l~~~~~~~--------------~~~i~~~~~~----------------~~g~ 163 (331)
T 3u4y_A 120 FIST--IPIPYDAVGIAISPNGNG----LILIDRSS--------------ANTVRRFKID----------------ADGV 163 (331)
T ss_dssp EEEE--EECCTTEEEEEECTTSSC----EEEEEETT--------------TTEEEEEEEC----------------TTCC
T ss_pred eEEE--EECCCCccceEECCCCCE----EEEEecCC--------------CceEEEEEEC----------------CCCc
Confidence 7665 344445678999999998 87765211 13 6666652 2222
Q ss_pred c----eecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCc
Q 004149 309 V----VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFP 384 (771)
Q Consensus 309 ~----~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 384 (771)
. ..............|||||++|++..... ..|+++|+.+++.... +..+.. .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~----------~~v~v~d~~~~~~~~~-------~~~~~~---~--- 220 (331)
T 3u4y_A 164 LFDTGQEFISGGTRPFNITFTPDGNFAFVANLIG----------NSIGILETQNPENITL-------LNAVGT---N--- 220 (331)
T ss_dssp EEEEEEEEECSSSSEEEEEECTTSSEEEEEETTT----------TEEEEEECSSTTSCEE-------EEEEEC---S---
T ss_pred EeecCCccccCCCCccceEECCCCCEEEEEeCCC----------CeEEEEECCCCcccce-------eeeccC---C---
Confidence 2 12222333467889999999887766442 4699999887664110 011100 0
Q ss_pred ccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC---C----CC---CceeeEEeecCCEEEEEEeCC
Q 004149 385 GLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP---A----ES---NFSWSLLTLDGDNIIAVSSSP 454 (771)
Q Consensus 385 g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~---~----~~---~~~~~~~s~d~~~l~~~~s~~ 454 (771)
..+..++|+|||++|+++.. +...|+.+|+.+++++.+.. . .. ......|++|++.|+++....
T Consensus 221 ----~~~~~~~~spdg~~l~v~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 294 (331)
T 3u4y_A 221 ----NLPGTIVVSRDGSTVYVLTE--STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANIS 294 (331)
T ss_dssp ----SCCCCEEECTTSSEEEEECS--SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTT
T ss_pred ----CCCceEEECCCCCEEEEEEc--CCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCC
Confidence 13457889999998877643 44568889999998754421 1 11 012258999999988776433
Q ss_pred CCCCeEEEEEec
Q 004149 455 VDVPQVKYGYFV 466 (771)
Q Consensus 455 ~~p~~l~~~~~~ 466 (771)
..+.+.++.
T Consensus 295 ---~~v~v~d~~ 303 (331)
T 3u4y_A 295 ---RELKVFTIS 303 (331)
T ss_dssp ---TEEEEEETT
T ss_pred ---CcEEEEEec
Confidence 346776654
No 213
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=99.62 E-value=3.4e-15 Score=152.99 Aligned_cols=235 Identities=13% Similarity=0.131 Sum_probs=131.6
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchH-----HHHHHHHCCcEEEEECCCCCCCCChhhhhcCC
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK-----SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP 589 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~-----~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~ 589 (771)
..+|.++++..+-+. ....|+||++||.+.... ..|.. .+..|++ +|.|+++|+||.+ .+.... +
T Consensus 17 ~~~~~~l~y~~~G~~----~~~~p~vvllHG~~~~~~-~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G---~s~~~~-~ 86 (286)
T 2qmq_A 17 ETPYGSVTFTVYGTP----KPKRPAIFTYHDVGLNYK-SCFQPLFRFGDMQEIIQ-NFVRVHVDAPGME---EGAPVF-P 86 (286)
T ss_dssp EETTEEEEEEEESCC----CTTCCEEEEECCTTCCHH-HHHHHHHTSHHHHHHHT-TSCEEEEECTTTS---TTCCCC-C
T ss_pred ccCCeEEEEEeccCC----CCCCCeEEEeCCCCCCch-hhhhhhhhhchhHHHhc-CCCEEEecCCCCC---CCCCCC-C
Confidence 345777776665432 124689999999776521 11332 5667765 6999999999943 321110 1
Q ss_pred CCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhh---------cCC
Q 004149 590 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV---------GTT 660 (771)
Q Consensus 590 ~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~---------~~~ 660 (771)
........+++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.+|........ ...
T Consensus 87 ~~~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 164 (286)
T 2qmq_A 87 LGYQYPSLDQLADMIPCILQY--LNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTS 164 (286)
T ss_dssp TTCCCCCHHHHHHTHHHHHHH--HTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHHHHHHHHHHHTTS
T ss_pred CCCCccCHHHHHHHHHHHHHH--hCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchhhhhhhhhccccc
Confidence 111001344444444444333 234689999999999999999999999999999999855221100 000
Q ss_pred CCCcchhhhhccCC-------C----CCcCCCCCChhhHHHHh----hcCc----cccccCCCCcEEEEeeCCCCccCcH
Q 004149 661 DIPDWCYVESYGSK-------G----KDSFTESPSVEDLTRFH----SKSP----ISHISKVKTPTIFLLGAQDLRVPVS 721 (771)
Q Consensus 661 ~~~~~~~~~~~~~~-------~----~~~~~~~~~~~~~~~~~----~~sp----~~~~~~i~~P~Lii~G~~D~~vp~~ 721 (771)
..........+... . ...+...........+. .... ...+.++++|+|+++|++|..+| .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~ 243 (286)
T 2qmq_A 165 SIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHED-A 243 (286)
T ss_dssp CHHHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTTHH-H
T ss_pred cchHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCcccc-H
Confidence 00000000000000 0 00000000000001110 0011 13456889999999999999987 2
Q ss_pred HHHHHHHHHHhCCC-CEEEEEeCCCCccCCCCCChHHHHHHHHHHHH
Q 004149 722 NGLQYARALREKGV-ETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 722 ~~~~~~~~l~~~g~-~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~ 767 (771)
. .+.+.+... .+++++++++||.+.. +...++.+.+.+||+
T Consensus 244 ~----~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 244 V----VECNSKLDPTQTSFLKMADSGGQPQL-TQPGKLTEAFKYFLQ 285 (286)
T ss_dssp H----HHHHHHSCGGGEEEEEETTCTTCHHH-HCHHHHHHHHHHHHC
T ss_pred H----HHHHHHhcCCCceEEEeCCCCCcccc-cChHHHHHHHHHHhc
Confidence 2 333444433 5899999999998653 335577788888874
No 214
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=99.62 E-value=1.3e-15 Score=163.19 Aligned_cols=212 Identities=11% Similarity=0.033 Sum_probs=139.6
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcE----EEEECCCCCCCCChhhhhcCCCCc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYS----LLIVNYRGSLGFGEEALQSLPGKV 592 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~----V~~~d~rG~~~~g~~~~~~~~~~~ 592 (771)
.|..+.+++|.|+++. .+++|+|+++||+.+... ..+...++.|+++|+. |+++|+++.. ++.. ...
T Consensus 178 ~g~~~~~~vy~P~~~~-~~~~PvlvllHG~~~~~~-~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~--~r~~--~~~--- 248 (403)
T 3c8d_A 178 LKNSRRVWIFTTGDVT-AEERPLAVLLDGEFWAQS-MPVWPVLTSLTHRQQLPPAVYVLIDAIDTT--HRAH--ELP--- 248 (403)
T ss_dssp TTEEEEEEEEEC------CCCCEEEESSHHHHHHT-SCCHHHHHHHHHTTSSCSCEEEEECCCSHH--HHHH--HSS---
T ss_pred cCCcEEEEEEeCCCCC-CCCCCEEEEeCCHHHhhc-CcHHHHHHHHHHcCCCCCeEEEEECCCCCc--cccc--cCC---
Confidence 4667889999998653 578999999999654221 2344567888888875 9999998621 1110 111
Q ss_pred cccchhhH--HHHHHHHHHcCC--CCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchhh
Q 004149 593 GSQDVNDV--LTAIDHVIDMGL--ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYV 668 (771)
Q Consensus 593 ~~~~~~D~--~~~i~~l~~~~~--~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~ 668 (771)
......+. .+++.++.++.. .|+++++|+|+||||++++.++.++|++|+++++.+|.+.+....
T Consensus 249 ~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~~~~~~----------- 317 (403)
T 3c8d_A 249 CNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRG----------- 317 (403)
T ss_dssp SCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTT-----------
T ss_pred ChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccccCCCC-----------
Confidence 01122332 245666666532 478899999999999999999999999999999999986432110
Q ss_pred hhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCcc
Q 004149 669 ESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHG 748 (771)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~ 748 (771)
.. ........+.. . ......+|++|++|+.|..+ ..+++++++.|+++|+++++.++++ +|.
T Consensus 318 ----~~--------~~~~~~~~~~~-~---~~~~~~~~i~l~~G~~D~~~-~~~~~~l~~~L~~~G~~v~~~~~~G-gH~ 379 (403)
T 3c8d_A 318 ----GQ--------QEGVLLEKLKA-G---EVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQVDG-GHD 379 (403)
T ss_dssp ----SS--------SCCHHHHHHHT-T---SSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEESC-CSC
T ss_pred ----CC--------cHHHHHHHHHh-c---cccCCCceEEEEeeCCCchh-HHHHHHHHHHHHhCCCCEEEEEeCC-CCC
Confidence 00 00011111111 1 12345688999999998654 5789999999999999999999999 697
Q ss_pred CCCCCChHHHHHHHHHHHHHH
Q 004149 749 IERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 749 ~~~~~~~~~~~~~i~~wl~~~ 769 (771)
+. .....+..++.||.+.
T Consensus 380 ~~---~w~~~l~~~l~~l~~~ 397 (403)
T 3c8d_A 380 AL---CWRGGLMQGLIDLWQP 397 (403)
T ss_dssp HH---HHHHHHHHHHHHHHGG
T ss_pred HH---HHHHHHHHHHHHHhcc
Confidence 42 2234566777777654
No 215
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.61 E-value=5e-14 Score=143.84 Aligned_cols=259 Identities=9% Similarity=0.063 Sum_probs=182.8
Q ss_pred CCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCC---------
Q 004149 51 GNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN--------- 121 (771)
Q Consensus 51 ~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~--------- 121 (771)
.+|..|.|+.... ...|+.++ .++...++|+.. ..--++|+|++|+|+....+
T Consensus 23 ~~g~~iy~~n~~d-------~~~ly~~~--~dg~~~~~l~~~---------~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~ 84 (302)
T 3s25_A 23 ESDGEVFFSNTND-------NGRLYAMN--IDGSNIHKLSND---------TAMYINADKNYVYYVRNNNQKITSQTFFS 84 (302)
T ss_dssp EETTEEEEEEGGG-------TTEEEEEE--TTSCSCEEEEEE---------EEEEEEECSSEEEEEEECC------CCSS
T ss_pred EeCCEEEEEeCCC-------CceEEEEc--CCCCCCEEccCC---------ceeeEEEcCCEEEEEECCCCcccccceec
Confidence 3788999975421 24677754 566677777543 23456999999999987642
Q ss_pred -CCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCC
Q 004149 122 -ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWK 199 (771)
Q Consensus 122 -~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (771)
....|+.+. ++++.++++.. .+..|+|+|++|+|.....
T Consensus 85 ~n~~~Iy~i~~dg~~~~~l~~~--------------~~~~~s~~g~~Iy~~~~~~------------------------- 125 (302)
T 3s25_A 85 YDRNSLCRIKRNGHGSTVLDPD--------------PCIYASLIGNYIYYLHYDT------------------------- 125 (302)
T ss_dssp CCSEEEEEEETTSCCCEEEECS--------------CEEEEEEETTEEEEEEESS-------------------------
T ss_pred cCCCeEEEEeCCCCcceEeecC--------------CccEEEEeCCEEEEEeecC-------------------------
Confidence 145688888 55555555432 2457999999999975111
Q ss_pred CcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCC
Q 004149 200 GQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRP 279 (771)
Q Consensus 200 ~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~ 279 (771)
.....||++++++...++| +.... ..|+|+|+. |+|++. ..
T Consensus 126 ---------------~~~~~Iy~~~~dGs~~~~l--t~~~~----~~~~~~g~~----iy~t~~--------------g~ 166 (302)
T 3s25_A 126 ---------------QTATSLYRIRIDGEEKKKI--KNHYL----FTCNTSDRY----FYYNNP--------------KN 166 (302)
T ss_dssp ---------------SSCEEEEEEETTSCCCEEE--ESSCC----CCSEEETTE----EEEECT--------------TT
T ss_pred ---------------CCCceEEEEECCCCCeEEE--eCCCc----eEeeEECCE----EEEEeC--------------CC
Confidence 0347899999999888888 44332 346899999 999873 23
Q ss_pred ceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCC
Q 004149 280 CALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 359 (771)
Q Consensus 280 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~ 359 (771)
.+||++++ +++..++|..... ..| ++|+|++|+|..... ..+|++++++++
T Consensus 167 ~~Iy~~~l-----------------~g~~~~~l~~~~~--~~~-~~P~g~~iy~t~~~~---------~~~I~~~~ldG~ 217 (302)
T 3s25_A 167 GQLYRYDT-----------------ASQSEALFYDCNC--YKP-VVLDDTNVYYMDVNR---------DNAIVHVNINNP 217 (302)
T ss_dssp CCEEEEET-----------------TTTEEEEEECSCE--EEE-EEEETTEEEEEEGGG---------TTEEEEECSSSC
T ss_pred ceEEEEEC-----------------CCCCEEEEeCCCc--cce-eeecCCEEEEEEcCC---------CcEEEEEECCCC
Confidence 38999998 7777777765322 345 459999999988653 268999999988
Q ss_pred CCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeE
Q 004149 360 GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSL 439 (771)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~ 439 (771)
..+.++... .+.|+|+|++|+|..... ...|+++++++...++|.... ...
T Consensus 218 ~~~~Lt~~~------------------------~~~~~~~g~~Iy~~~~~~-~~~i~~~~~DG~~r~~l~~~~----~~~ 268 (302)
T 3s25_A 218 NPVVLTEAN------------------------IEHYNVYGSLIFYQRGGD-NPALCVVKNDGTGFKELAKGE----FCN 268 (302)
T ss_dssp CCEECSCSC------------------------EEEEEEETTEEEEEECSS-SCEEEEEETTSCCCEEEEESC----EEE
T ss_pred CeEEEeCCC------------------------cceEEECCCEEEEEECCC-CcEEEEEECCCCccEEeeCCc----cce
Confidence 776664332 134899999998876543 378999999888888887653 246
Q ss_pred EeecCCEEEEEEeCCCCCCeEEEEEec
Q 004149 440 LTLDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 440 ~s~d~~~l~~~~s~~~~p~~l~~~~~~ 466 (771)
+++.+++|+++..... .|++.++.
T Consensus 269 i~i~~d~Iy~td~~~~---~i~~~~~d 292 (302)
T 3s25_A 269 INVTSQYVYFTDFVSN---KEYCTSTQ 292 (302)
T ss_dssp EEECSSEEEEEETTTC---CEEEEESS
T ss_pred EEEeCCEEEEEECCCC---eEEEEECC
Confidence 7889999999875333 38877643
No 216
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=99.61 E-value=4.3e-16 Score=160.14 Aligned_cols=215 Identities=13% Similarity=0.140 Sum_probs=128.2
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCC
Q 004149 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 616 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 616 (771)
.|+||++||.+.......|...+..|+ .||.|+++|+||. |.+.. .......++++.+.+..+++.. +.+
T Consensus 41 ~p~vv~lHG~G~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~---G~S~~----~~~~~~~~~~~~~~l~~~l~~~--~~~ 110 (292)
T 3l80_A 41 NPCFVFLSGAGFFSTADNFANIIDKLP-DSIGILTIDAPNS---GYSPV----SNQANVGLRDWVNAILMIFEHF--KFQ 110 (292)
T ss_dssp SSEEEEECCSSSCCHHHHTHHHHTTSC-TTSEEEEECCTTS---TTSCC----CCCTTCCHHHHHHHHHHHHHHS--CCS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHHh-hcCeEEEEcCCCC---CCCCC----CCcccccHHHHHHHHHHHHHHh--CCC
Confidence 389999997433322345667777775 6999999999994 44321 1112234667777666666653 446
Q ss_pred eEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCCCCcchh---hhhccC---------CCCCcCCCCCC
Q 004149 617 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCY---VESYGS---------KGKDSFTESPS 684 (771)
Q Consensus 617 ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~---~~~~~~---------~~~~~~~~~~~ 684 (771)
++.|+|||+||.+++.++.++|++++++|+.+|.................. ...... ...........
T Consensus 111 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (292)
T 3l80_A 111 SYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQ 190 (292)
T ss_dssp EEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHSCHHH
T ss_pred CeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchhHHHHHHHHhccCchhhhHhhccccccCHHH
Confidence 899999999999999999999999999999996543222111110000000 000000 00000000000
Q ss_pred h--------hhHHHHhhcCc---------------cccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEE
Q 004149 685 V--------EDLTRFHSKSP---------------ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV 741 (771)
Q Consensus 685 ~--------~~~~~~~~~sp---------------~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 741 (771)
. .....+....+ ...+.+ ++|+|+++|++|..++++ + .+.+.+. ..+ ++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~~~-~-~~~~~~~----~~~-~~ 262 (292)
T 3l80_A 191 FKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDFKTGISE-KIPSIVFSESFREKEYLE-S-EYLNKHT----QTK-LI 262 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSTTCCSSCCCCGGGGCCCCCT-TSCEEEEECGGGHHHHHT-S-TTCCCCT----TCE-EE
T ss_pred HHHhHHHHHHHHHHHHhhhhccccchhhhhcchhhhhccCC-CCCEEEEEccCccccchH-H-HHhccCC----Cce-ee
Confidence 0 00000111111 123445 899999999999999877 5 5443332 356 89
Q ss_pred eCCCCccCCCCCChHHHHHHHHHHHHHHh
Q 004149 742 FPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 742 ~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
+++++|.+.. +...++.+.|.+||+++-
T Consensus 263 ~~~~gH~~~~-e~p~~~~~~i~~fl~~~~ 290 (292)
T 3l80_A 263 LCGQHHYLHW-SETNSILEKVEQLLSNHE 290 (292)
T ss_dssp ECCSSSCHHH-HCHHHHHHHHHHHHHTCT
T ss_pred eCCCCCcchh-hCHHHHHHHHHHHHHhcc
Confidence 9999997653 345678899999998764
No 217
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=99.61 E-value=3.4e-15 Score=155.59 Aligned_cols=225 Identities=14% Similarity=0.165 Sum_probs=131.9
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|..+++... +.++.|+||++||.+.+ ...|...+..|++. |.|+++|+|| +|.+... ......
T Consensus 29 ~g~~l~y~~~------G~g~~~~vvllHG~~~~--~~~w~~~~~~L~~~-~~via~Dl~G---hG~S~~~----~~~~~~ 92 (318)
T 2psd_A 29 LDSFINYYDS------EKHAENAVIFLHGNATS--SYLWRHVVPHIEPV-ARCIIPDLIG---MGKSGKS----GNGSYR 92 (318)
T ss_dssp TTEEEEEEEC------CSCTTSEEEEECCTTCC--GGGGTTTGGGTTTT-SEEEEECCTT---STTCCCC----TTSCCS
T ss_pred CCeEEEEEEc------CCCCCCeEEEECCCCCc--HHHHHHHHHHhhhc-CeEEEEeCCC---CCCCCCC----CCCccC
Confidence 4666654432 22334689999997755 34576677777654 7999999999 4444211 111234
Q ss_pred hhhHHHHHHHHHHcCCCCC-CeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchh-hhhcCCCCCc-c--------
Q 004149 597 VNDVLTAIDHVIDMGLANP-SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA-LMVGTTDIPD-W-------- 665 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~-~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~-~~~~~~~~~~-~-------- 665 (771)
++++.+.+..+++. ++. +++.|+||||||.+++.+|.++|++++++|+.++..... .......... +
T Consensus 93 ~~~~a~dl~~ll~~--l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (318)
T 2psd_A 93 LLDHYKYLTAWFEL--LNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEG 170 (318)
T ss_dssp HHHHHHHHHHHHTT--SCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCHHHHHHHHSTHH
T ss_pred HHHHHHHHHHHHHh--cCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHHHHHHHHhcccc
Confidence 66666666666665 344 789999999999999999999999999999866432110 0000000000 0
Q ss_pred --------hhhhhccCCCCCcCCCCCChhhHHH-----------------HhhcC----------------ccccccCC-
Q 004149 666 --------CYVESYGSKGKDSFTESPSVEDLTR-----------------FHSKS----------------PISHISKV- 703 (771)
Q Consensus 666 --------~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~s----------------p~~~~~~i- 703 (771)
.+...+.... .......+.... +.... ....+.++
T Consensus 171 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 247 (318)
T 2psd_A 171 EKMVLENNFFVETVLPSK---IMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASD 247 (318)
T ss_dssp HHHHTTTCHHHHTHHHHT---CSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHTCT
T ss_pred hhhhhcchHHHHhhcccc---ccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHHHhcccc
Confidence 0000000000 000000000000 00000 01124567
Q ss_pred CCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHh
Q 004149 704 KTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 704 ~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
++|+|+++|++| .+++ .++.+.+.+ ...+++++ ++||... .+...++.+.|.+||++..
T Consensus 248 ~~P~Lvi~G~~D-~~~~-~~~~~~~~~----~~~~~~~i-~~gH~~~-~e~p~~~~~~i~~fl~~~~ 306 (318)
T 2psd_A 248 DLPKLFIESDPG-FFSN-AIVEGAKKF----PNTEFVKV-KGLHFLQ-EDAPDEMGKYIKSFVERVL 306 (318)
T ss_dssp TSCEEEEEEEEC-SSHH-HHHHHHTTS----SSEEEEEE-EESSSGG-GTCHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeccc-cCcH-HHHHHHHhC----CCcEEEEe-cCCCCCH-hhCHHHHHHHHHHHHHHhh
Confidence 999999999999 8876 555554443 24677788 7799765 4456788999999998653
No 218
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=99.39 E-value=6.4e-17 Score=167.05 Aligned_cols=220 Identities=12% Similarity=0.190 Sum_probs=124.2
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004149 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
..|+||++||.+.. ...|...+..|+ +||.|+++|+||. |.+..............+++.+.+..+++. ++.
T Consensus 24 ~~p~vv~lHG~~~~--~~~~~~~~~~l~-~g~~v~~~D~~G~---G~s~~~~~~~~~~~~~~~~~~~~l~~~l~~--l~~ 95 (304)
T 3b12_A 24 SGPALLLLHGFPQN--LHMWARVAPLLA-NEYTVVCADLRGY---GGSSKPVGAPDHANYSFRAMASDQRELMRT--LGF 95 (304)
Confidence 35789999997765 346777778887 7999999999994 444321100001112233333333333332 234
Q ss_pred CeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhhcCCC-----------------CCcch-------hhhh-
Q 004149 616 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD-----------------IPDWC-------YVES- 670 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~-----------------~~~~~-------~~~~- 670 (771)
+++.|+|||+||.+++.++.++|++++++|+.+|............ ..... +...
T Consensus 96 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (304)
T 3b12_A 96 ERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPYPEKVIGADPDTFYEGC 175 (304)
Confidence 6899999999999999999999999999999988654221100000 00000 0000
Q ss_pred cc-----------CCCCCcCCCCC-C----hhhHHHHhhc---C----ccccccCCCCcEEEEeeCCCCcc-CcHHHHHH
Q 004149 671 YG-----------SKGKDSFTESP-S----VEDLTRFHSK---S----PISHISKVKTPTIFLLGAQDLRV-PVSNGLQY 726 (771)
Q Consensus 671 ~~-----------~~~~~~~~~~~-~----~~~~~~~~~~---s----p~~~~~~i~~P~Lii~G~~D~~v-p~~~~~~~ 726 (771)
+. ......+.... . ......+... . ....+.++++|+|+++|++|..+ +......+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~ 255 (304)
T 3b12_A 176 LFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFSGSAGLMHSLFEMQVVW 255 (304)
Confidence 00 00000000000 0 0000000000 0 00116788999999999999655 44444444
Q ss_pred HHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHH
Q 004149 727 ARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 769 (771)
Q Consensus 727 ~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~ 769 (771)
.+.+. ++++.++ ++||.+.. +...++.+.|.+||++.
T Consensus 256 ~~~~~----~~~~~~i-~~gH~~~~-e~p~~~~~~i~~fl~~~ 292 (304)
T 3b12_A 256 APRLA----NMRFASL-PGGHFFVD-RFPDDTARILREFLSDA 292 (304)
Confidence 44333 3677778 99998764 34457888899999765
No 219
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=99.59 E-value=4.9e-15 Score=150.62 Aligned_cols=212 Identities=17% Similarity=0.124 Sum_probs=129.0
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHH-CCcEEEEECCCCCCCCC-----hhhhhcC---
Q 004149 518 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFG-----EEALQSL--- 588 (771)
Q Consensus 518 g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~-~G~~V~~~d~rG~~~~g-----~~~~~~~--- 588 (771)
+.++..++|.|+++.+.+++|+|+++||+.... .......+.+++ .+..|+.+++++...+. .++....
T Consensus 24 ~~~~~~~vylP~~y~~~~~yPvly~l~G~~~~~--~~~~~~~~~l~~~~~~ivV~v~~~~~~~~~~~~R~~d~~~~~~~~ 101 (278)
T 2gzs_A 24 TRHYRVWTAVPNTTAPASGYPILYMLDGNAVMD--RLDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRAYDYTPAAESR 101 (278)
T ss_dssp SCEEEEEEEEESSCCCTTCEEEEEESSHHHHHH--HCCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHHHHHTCCGGGGT
T ss_pred CceEEEEEECCCCCCCCCCCCEEEEeeChhHHH--HHHHHHHHHhccCCCeEEEEEcCCCCCcCcccccccccCCCCccc
Confidence 678999999999887778899887777743211 111223455554 68889989987532111 0110000
Q ss_pred -CC-C-----ccccchhhHHHH-----HHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhh
Q 004149 589 -PG-K-----VGSQDVNDVLTA-----IDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM 656 (771)
Q Consensus 589 -~~-~-----~~~~~~~D~~~~-----i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~ 656 (771)
+. . .......++... +.++.++..++++|++|+|+||||++++.++.+ |+.|+++++.+|...+...
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~~~~~~~ 180 (278)
T 2gzs_A 102 KTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPSLGRGYD 180 (278)
T ss_dssp TCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGGGSTTHH
T ss_pred cccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcchhcCcc
Confidence 00 0 000012222222 223344455788899999999999999999999 9999999999986432100
Q ss_pred hcCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCcc--------CcHHHHHHHH
Q 004149 657 VGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRV--------PVSNGLQYAR 728 (771)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~v--------p~~~~~~~~~ 728 (771)
.+. .......+ . ..-..|+++.+|+.|..+ +..+++++++
T Consensus 181 ---------~~~--------------------~~~~~~~~--~-~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~ 228 (278)
T 2gzs_A 181 ---------ALL--------------------SRVTAVEP--L-QFCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTLT 228 (278)
T ss_dssp ---------HHH--------------------HHHHTSCT--T-TTTTCEEEEEECCC-----------CHHHHHHHHHH
T ss_pred ---------hHH--------------------HHHHHhhc--c-CCCCCcEEEEecCccccccccchhhhhHHHHHHHHH
Confidence 000 00000000 0 112468999999999864 3688999999
Q ss_pred HHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004149 729 ALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 729 ~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
+|+++|+++++.++|+++|.... ...+...+.||.+
T Consensus 229 ~L~~~g~~~~~~~~~g~~H~~~~----~~~~~~~l~fl~~ 264 (278)
T 2gzs_A 229 ILKDKGVNAVFWDFPNLGHGPMF----NASFRQALLDISG 264 (278)
T ss_dssp HHHHTTCCEEEEECTTCCHHHHH----HHHHHHHHHHHTT
T ss_pred HHHcCCCeeEEEEcCCCCccchh----HHHHHHHHHHHhh
Confidence 99999999999999999997431 1223445556643
No 220
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.59 E-value=4.9e-13 Score=139.95 Aligned_cols=258 Identities=9% Similarity=-0.015 Sum_probs=148.7
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceE-EEeCCCCCeEEEEecCCCCCC
Q 004149 46 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASA-VVPSPSGSKLLVVRNPENESP 124 (771)
Q Consensus 46 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~-~~~SPdG~~la~~~~~~~~~~ 124 (771)
....++||+.+++.... ...++.+++.........++.. ..... ++|||||++|+ +....++..
T Consensus 44 ~~~~s~dg~~l~~~~~~--------~~~i~~~d~~~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~-~~~~~~~~~ 108 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDF--------CQTLVQIETQLEPPKVVAIQEG------QSSMADVDITPDDQFAV-TVTGLNHPF 108 (331)
T ss_dssp EEEECSSSCEEEEEEST--------TCEEEEEECSSSSCEEEEEEEC------SSCCCCEEECTTSSEEE-ECCCSSSSC
T ss_pred eEEEcCCCCEEEEEeCC--------CCeEEEEECCCCceeEEecccC------CCCccceEECCCCCEEE-EecCCCCcc
Confidence 44457899877665432 2478887764332102223222 22345 89999999997 544332222
Q ss_pred eEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCccc
Q 004149 125 IQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGD 203 (771)
Q Consensus 125 ~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (771)
.++.++ ..++..+.+...... .++.|||||++|++.....
T Consensus 109 ~i~v~d~~~~~~~~~~~~~~~~----------~~~~~spdg~~l~~~~~~~----------------------------- 149 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIPYDA----------VGIAISPNGNGLILIDRSS----------------------------- 149 (331)
T ss_dssp EEEEEETTTTEEEEEEECCTTE----------EEEEECTTSSCEEEEEETT-----------------------------
T ss_pred cEEEEECCCCCeEEEEECCCCc----------cceEECCCCCEEEEEecCC-----------------------------
Confidence 566655 455554544443333 4899999999877654321
Q ss_pred ccCCcCcccCCccCce-EEEEEccCCc-e----eeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeecc
Q 004149 204 WEEDWGETYAGKRQPS-LFVININSGE-V----QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYN 277 (771)
Q Consensus 204 ~~~d~g~~~~~~~~~~-l~v~d~~~~~-~----~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~ 277 (771)
.. |++|+++... + ... .+....+..++|+|||+. |+++..
T Consensus 150 --------------~~~i~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~spdg~~----l~v~~~-------------- 195 (331)
T 3u4y_A 150 --------------ANTVRRFKIDADGVLFDTGQEF--ISGGTRPFNITFTPDGNF----AFVANL-------------- 195 (331)
T ss_dssp --------------TTEEEEEEECTTCCEEEEEEEE--ECSSSSEEEEEECTTSSE----EEEEET--------------
T ss_pred --------------CceEEEEEECCCCcEeecCCcc--ccCCCCccceEECCCCCE----EEEEeC--------------
Confidence 23 6666665322 2 122 233345678899999997 766652
Q ss_pred CCceeEEEecccccchhhhhhhhcCCCCCCcc---eecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceee
Q 004149 278 RPCALYAVRVSLYKSEASELELKESSSEDLPV---VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 354 (771)
Q Consensus 278 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~ 354 (771)
....|+++|+ .+++. ............++|||||++|++.... ...|+++
T Consensus 196 ~~~~v~v~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~----------~~~i~~~ 248 (331)
T 3u4y_A 196 IGNSIGILET-----------------QNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTES----------TVDVFNF 248 (331)
T ss_dssp TTTEEEEEEC-----------------SSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSS----------EEEEEEE
T ss_pred CCCeEEEEEC-----------------CCCcccceeeeccCCCCCceEEECCCCCEEEEEEcC----------CCEEEEE
Confidence 2347899998 55553 2222234556789999999988765543 2458999
Q ss_pred ecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC
Q 004149 355 DWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP 430 (771)
Q Consensus 355 d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~ 430 (771)
|+.+++...+..- ...+. ... ........++|+|||++|+++....+ .+..+++.+..+..+..
T Consensus 249 d~~~~~~~~~~~~----~~~~~--~~~----~~~~~~~~~~~spdg~~l~v~~~~~~--~v~v~d~~~~~~~~~~~ 312 (331)
T 3u4y_A 249 NQLSGTLSFVKSF----GHGLL--IDP----RPLFGANQMALNKTETKLFISANISR--ELKVFTISGKVVGYVAG 312 (331)
T ss_dssp ETTTTEEEEEEEE----ECCCC--CCC----GGGTTCCCEEECTTSSEEEEEETTTT--EEEEEETTSCEEEECTT
T ss_pred ECCCCceeeeccc----ccccc--cCC----CCcccccceEECCCCCEEEEecCCCC--cEEEEEecCCcccceec
Confidence 9887664222100 00000 000 00011235689999999887765444 45566787766665543
No 221
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.58 E-value=1.3e-13 Score=144.39 Aligned_cols=261 Identities=11% Similarity=0.015 Sum_probs=155.3
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCC-cccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004149 101 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQ-TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
...++|||||+++++.... ...++.++ .+++....+.... ..++ ....++.|||||++|++.......
T Consensus 36 ~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~~~-- 105 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNK---SESLVKIDLVTGETLGRIDLSTPEERV-----KSLFGAALSPDGKTLAIYESPVRL-- 105 (337)
T ss_dssp CCCEEECTTSSEEEEEETT---TTEEEEEETTTCCEEEEEECCBTTEEE-----ECTTCEEECTTSSEEEEEEEEEEE--
T ss_pred ccceEEcCCCCEEEEEeCC---CCeEEEEECCCCCeEeeEEcCCccccc-----ccccceEECCCCCEEEEEeccccc--
Confidence 5678999999998776542 23566666 4555544444322 0000 012589999999998886422100
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEE
Q 004149 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 258 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l 258 (771)
.++|. ......|++||+.+++.... .+....+..++|+|||+. |
T Consensus 106 --------------------------~~~~~----~~~~~~i~v~d~~~~~~~~~--~~~~~~~~~~~~s~dg~~----l 149 (337)
T 1pby_B 106 --------------------------ELTHF----EVQPTRVALYDAETLSRRKA--FEAPRQITMLAWARDGSK----L 149 (337)
T ss_dssp --------------------------CSSCE----EECCCEEEEEETTTTEEEEE--EECCSSCCCEEECTTSSC----E
T ss_pred --------------------------ccccc----cccCceEEEEECCCCcEEEE--EeCCCCcceeEECCCCCE----E
Confidence 00000 00237899999998877655 333445678899999998 8
Q ss_pred EEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCC
Q 004149 259 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 338 (771)
Q Consensus 259 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~ 338 (771)
++.. ..|+++|+ .+++...............|+|||+.|++.....
T Consensus 150 ~~~~-----------------~~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 195 (337)
T 1pby_B 150 YGLG-----------------RDLHVMDP-----------------EAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESS 195 (337)
T ss_dssp EEES-----------------SSEEEEET-----------------TTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTT
T ss_pred EEeC-----------------CeEEEEEC-----------------CCCcEeeeeeccccCCCceeCCCccEEeeeccCC
Confidence 7762 16899998 5565443322222223558999999876554332
Q ss_pred CCC----------CC---CccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEE
Q 004149 339 SVD----------SG---AHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLL 405 (771)
Q Consensus 339 ~~~----------~g---~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~ 405 (771)
... .| +......|+++|+.+++...+.... ....+..++|+|||++|++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~------------------~~~~~~~~~~s~dg~~l~~ 257 (337)
T 1pby_B 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI------------------MDVFYFSTAVNPAKTRAFG 257 (337)
T ss_dssp TEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEE------------------CSSCEEEEEECTTSSEEEE
T ss_pred CceeeeeeccccccccccccccccceEEEeCCCCCceEeecCC------------------CCCceeeEEECCCCCEEEE
Confidence 100 00 0001125788888876542110000 0012235789999998876
Q ss_pred EeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 406 SSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 406 ~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
. ...|+.+|+.+++...............|++||+.|++.. ....|.+.++.++
T Consensus 258 ~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~----~~~~i~v~d~~~~ 311 (337)
T 1pby_B 258 A-----YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGG----ALGDLAAYDAETL 311 (337)
T ss_dssp E-----ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEES----BSSEEEEEETTTC
T ss_pred e-----CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEc----CCCcEEEEECcCC
Confidence 6 2578889999988765543333345678999999887752 2356888876554
No 222
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.57 E-value=2e-13 Score=143.99 Aligned_cols=266 Identities=11% Similarity=0.115 Sum_probs=148.2
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEE
Q 004149 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 128 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 128 (771)
.+|||+ |+++... .....++++++..+ ..+++... .........++|||||++|++..... +.-.+|.
T Consensus 47 ~spdg~-l~~~~~~------~~~~~v~~~~~~~g--~~~~~~~~--~~~~~~p~~~a~spdg~~l~~~~~~~-~~v~v~~ 114 (347)
T 3hfq_A 47 LSAKDC-LYSVDKE------DDEGGIAAWQIDGQ--TAHKLNTV--VAPGTPPAYVAVDEARQLVYSANYHK-GTAEVMK 114 (347)
T ss_dssp ECTTCE-EEEEEEE------TTEEEEEEEEEETT--EEEEEEEE--EEESCCCSEEEEETTTTEEEEEETTT-TEEEEEE
T ss_pred EccCCe-EEEEEec------CCCceEEEEEecCC--cEEEeeee--ecCCCCCEEEEECCCCCEEEEEeCCC-CEEEEEE
Confidence 367998 5444321 12467888877432 33333321 01113466789999999997765432 3344555
Q ss_pred EecCCcceEEEecCCcccccc--cCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccC
Q 004149 129 LWSQSQLEKEFHVPQTVHGSV--YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE 206 (771)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (771)
+..++....+........+.. ........++|||||+ |+.. ..
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~-~~--------------------------------- 159 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVI-DL--------------------------------- 159 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEE-ET---------------------------------
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEE-eC---------------------------------
Confidence 544444444433321110000 0001124689999999 5443 22
Q ss_pred CcCcccCCccCceEEEEEcc-CCceeecc--CCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeE
Q 004149 207 DWGETYAGKRQPSLFVININ-SGEVQAVK--GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 283 (771)
Q Consensus 207 d~g~~~~~~~~~~l~v~d~~-~~~~~~l~--~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~ 283 (771)
....|++|++. +++...+. ..+....+..++|+|||+. |+++.. ....|+
T Consensus 160 ---------~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~----l~v~~~--------------~~~~v~ 212 (347)
T 3hfq_A 160 ---------GSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQY----AFLAGE--------------LSSQIA 212 (347)
T ss_dssp ---------TTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSE----EEEEET--------------TTTEEE
T ss_pred ---------CCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCE----EEEEeC--------------CCCEEE
Confidence 22578899987 56554331 0222335667899999997 766542 222455
Q ss_pred EEecccccchhhhhhhhcCCCCCCcceec---CCC------CccccceeecCCCCEEEEEecCCCCCCCCccccccceee
Q 004149 284 AVRVSLYKSEASELELKESSSEDLPVVNL---TES------ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 354 (771)
Q Consensus 284 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~l---t~~------~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~ 354 (771)
+++++. .+++.+.+ ... ......++|||||++|+...... ..|.++
T Consensus 213 v~~~~~---------------~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~----------~~v~v~ 267 (347)
T 3hfq_A 213 SLKYDT---------------QTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY----------NTLAVF 267 (347)
T ss_dssp EEEEET---------------TTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT----------TEEEEE
T ss_pred EEEecC---------------CCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC----------CEEEEE
Confidence 555521 23433221 111 12366789999999887665432 357778
Q ss_pred ecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 004149 355 DWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 429 (771)
Q Consensus 355 d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 429 (771)
++...+... .+..+.. .+ ..+..++|+|||++|+++....+...+|.+|.++|+++++.
T Consensus 268 ~~~~~g~~~-------~~~~~~~--~~-------~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 268 AVTADGHLT-------LIQQIST--EG-------DFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp EECGGGCEE-------EEEEEEC--SS-------SCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred EECCCCcEE-------EeEEEec--CC-------CCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 775322110 1111110 01 12456789999998887766667888999999999988765
No 223
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.56 E-value=1.3e-12 Score=136.60 Aligned_cols=265 Identities=11% Similarity=0.060 Sum_probs=165.3
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEE
Q 004149 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFEL 129 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~ 129 (771)
++||+.|+... .+.+.+|++....... .+...........+...+|+|||+.|+.....+ .+.+
T Consensus 60 ~~~~~~l~~~~----------dg~i~iw~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~ 123 (337)
T 1gxr_A 60 SNPTRHVYTGG----------KGCVKVWDISHPGNKS-PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS-----TLSI 123 (337)
T ss_dssp CSSSSEEEEEC----------BSEEEEEETTSTTCCS-CSEEEECSCTTSBEEEEEECTTSSEEEEEESSS-----EEEE
T ss_pred ecCCcEEEEcC----------CCeEEEEECCCCCcee-eeecccccCCCCcEEEEEEcCCCCEEEEEcCCC-----cEEE
Confidence 56777777642 2467777775433211 111100011225688899999999998876543 3445
Q ss_pred e--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCC
Q 004149 130 W--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEED 207 (771)
Q Consensus 130 ~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 207 (771)
| ..++.......... .+ .+..+.|+|||+.|+..+.
T Consensus 124 ~d~~~~~~~~~~~~~~~-~~------~i~~~~~~~~~~~l~~~~~----------------------------------- 161 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTSS-AP------ACYALAISPDSKVCFSCCS----------------------------------- 161 (337)
T ss_dssp EECCCC--EEEEEEECS-SS------CEEEEEECTTSSEEEEEET-----------------------------------
T ss_pred EECCCCCcceeeecccC-CC------ceEEEEECCCCCEEEEEeC-----------------------------------
Confidence 5 23332222222111 11 1258999999998887643
Q ss_pred cCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEec
Q 004149 208 WGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRV 287 (771)
Q Consensus 208 ~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~ 287 (771)
...|++||+.+++..... ......+..+.|+|||+. |+..+ ....|+++|+
T Consensus 162 ---------dg~v~~~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~----l~~~~---------------~dg~i~~~d~ 212 (337)
T 1gxr_A 162 ---------DGNIAVWDLHNQTLVRQF-QGHTDGASCIDISNDGTK----LWTGG---------------LDNTVRSWDL 212 (337)
T ss_dssp ---------TSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------TTSEEEEEET
T ss_pred ---------CCcEEEEeCCCCceeeee-ecccCceEEEEECCCCCE----EEEEe---------------cCCcEEEEEC
Confidence 257899999888765441 234456888999999987 77665 3347889998
Q ss_pred ccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccc
Q 004149 288 SLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK 367 (771)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~ 367 (771)
.+++..........+....|||||+.|+..+.+. .|+++|+.+++...+...
T Consensus 213 -----------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~-----------~i~~~~~~~~~~~~~~~~ 264 (337)
T 1gxr_A 213 -----------------REGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESS-----------NVEVLHVNKPDKYQLHLH 264 (337)
T ss_dssp -----------------TTTEEEEEEECSSCEEEEEECTTSSEEEEEETTS-----------CEEEEETTSSCEEEECCC
T ss_pred -----------------CCCceEeeecCCCceEEEEECCCCCEEEEEcCCC-----------cEEEEECCCCCeEEEcCC
Confidence 5555444444556688899999999998777542 488899877553211100
Q ss_pred eeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEE
Q 004149 368 IVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNI 447 (771)
Q Consensus 368 ~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l 447 (771)
...+..+.|+||++.|+ +...++ .|..+++.+++..........+....|+++++.|
T Consensus 265 --------------------~~~v~~~~~~~~~~~l~-~~~~dg--~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 321 (337)
T 1gxr_A 265 --------------------ESCVLSLKFAYCGKWFV-STGKDN--LLNAWRTPYGASIFQSKESSSVLSCDISVDDKYI 321 (337)
T ss_dssp --------------------SSCEEEEEECTTSSEEE-EEETTS--EEEEEETTTCCEEEEEECSSCEEEEEECTTSCEE
T ss_pred --------------------ccceeEEEECCCCCEEE-EecCCC--cEEEEECCCCeEEEEecCCCcEEEEEECCCCCEE
Confidence 11245678999999665 444444 4555688888776555444455667889999877
Q ss_pred EEEEe
Q 004149 448 IAVSS 452 (771)
Q Consensus 448 ~~~~s 452 (771)
+....
T Consensus 322 ~~~~~ 326 (337)
T 1gxr_A 322 VTGSG 326 (337)
T ss_dssp EEEET
T ss_pred EEecC
Confidence 66553
No 224
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.56 E-value=5.5e-13 Score=152.25 Aligned_cols=313 Identities=16% Similarity=0.119 Sum_probs=180.3
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEE
Q 004149 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFEL 129 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~ 129 (771)
+|||+.|+|... ..+.++++... .....++.. ...+...+|||||++||..+..+ ...+
T Consensus 27 spdg~~l~~~~~----------~~v~l~~~~~~-~~~~~~~~h-----~~~v~~~~~spdg~~lasg~~d~-----~v~l 85 (611)
T 1nr0_A 27 TPAGDKIQYCNG----------TSVYTVPVGSL-TDTEIYTEH-----SHQTTVAKTSPSGYYCASGDVHG-----NVRI 85 (611)
T ss_dssp CTTSSEEEEEET----------TEEEEEETTCS-SCCEEECCC-----SSCEEEEEECTTSSEEEEEETTS-----EEEE
T ss_pred CCCCCEEEeCCC----------CEEEEecCCCc-ccCeEecCC-----CCceEEEEECCCCcEEEEEeCCC-----CEEE
Confidence 789999998642 14555555322 122223222 25688899999999999876544 5667
Q ss_pred ec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC--CCCCccCCCCCCCCCCccCCCCCCccccc
Q 004149 130 WS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP--SKPTFSLGSTKGGSSDKDCNSWKGQGDWE 205 (771)
Q Consensus 130 ~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (771)
|+ .++......+. ...+. +..++|||||+.|+..+..... ....|+. .........+......+.|+
T Consensus 86 Wd~~~~~~~~~~~~~-~~~~~------v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~~~~l~gh~~~v~~v~f~ 156 (611)
T 1nr0_A 86 WDTTQTTHILKTTIP-VFSGP------VKDISWDSESKRIAAVGEGRERFGHVFLFDT--GTSNGNLTGQARAMNSVDFK 156 (611)
T ss_dssp EESSSTTCCEEEEEE-CSSSC------EEEEEECTTSCEEEEEECCSSCSEEEEETTT--CCBCBCCCCCSSCEEEEEEC
T ss_pred eECCCCcceeeEeec-ccCCc------eEEEEECCCCCEEEEEECCCCceeEEEEeeC--CCCcceecCCCCCceEEEEC
Confidence 73 22222222211 11122 2699999999999987754321 1112221 11122233444555667788
Q ss_pred CCcCc-ccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEE
Q 004149 206 EDWGE-TYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYA 284 (771)
Q Consensus 206 ~d~g~-~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~ 284 (771)
|+... .+++..+..|.+||..+++..... ......+..++|||||+. |+..+ .+..|.+
T Consensus 157 p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l-~~H~~~V~~v~fspdg~~----las~s---------------~D~~i~l 216 (611)
T 1nr0_A 157 PSRPFRIISGSDDNTVAIFEGPPFKFKSTF-GEHTKFVHSVRYNPDGSL----FASTG---------------GDGTIVL 216 (611)
T ss_dssp SSSSCEEEEEETTSCEEEEETTTBEEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------TTSCEEE
T ss_pred CCCCeEEEEEeCCCeEEEEECCCCeEeeee-ccccCceEEEEECCCCCE----EEEEE---------------CCCcEEE
Confidence 88653 566777889999998877654431 334456889999999997 77665 3346888
Q ss_pred EecccccchhhhhhhhcCCCCCCcc-eecC-------CCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeec
Q 004149 285 VRVSLYKSEASELELKESSSEDLPV-VNLT-------ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW 356 (771)
Q Consensus 285 ~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt-------~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~ 356 (771)
+|+ .+++. ..+. .+...+...+|||||++|+..+.+. .|.+||+
T Consensus 217 wd~-----------------~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~-----------~v~lWd~ 268 (611)
T 1nr0_A 217 YNG-----------------VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK-----------TIKIWNV 268 (611)
T ss_dssp EET-----------------TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS-----------EEEEEET
T ss_pred EEC-----------------CCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCC-----------eEEEEeC
Confidence 887 44433 2332 4566788999999999998777653 4778887
Q ss_pred CCCCCCCCcc----------------------ceeeEEecccccCCC---CCcccccCCCCCCccccCCCEEEEEeeeCC
Q 004149 357 PTNGNFSSLE----------------------KIVDVIPVVQCAEGD---CFPGLYSSSILSNPWLSDGCTMLLSSIWGS 411 (771)
Q Consensus 357 ~~~~~~~~~~----------------------~~~~~~~~~~~~~~~---~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~ 411 (771)
.+++...... ..+..+.++...... .+.| +...+..++|+|||+.| ++...++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~g-h~~~v~~l~~spdg~~l-~s~s~D~ 346 (611)
T 1nr0_A 269 ATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYG-HNKAITALSSSADGKTL-FSADAEG 346 (611)
T ss_dssp TTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEE-EEEETTS
T ss_pred CCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcC-CCCCEEEEEEeCCCCEE-EEEeCCC
Confidence 7654321100 000011111111000 0001 11234568899999966 4555566
Q ss_pred eeEEEEEECCCCcEEEecCC--CCCceeeEEeecC
Q 004149 412 SQVIISVNVSSGELLRITPA--ESNFSWSLLTLDG 444 (771)
Q Consensus 412 ~~~l~~~d~~tg~~~~l~~~--~~~~~~~~~s~d~ 444 (771)
...+ +|+.+++..++... ...+....+++++
T Consensus 347 ~v~~--Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~ 379 (611)
T 1nr0_A 347 HINS--WDISTGISNRVFPDVHATMITGIKTTSKG 379 (611)
T ss_dssp CEEE--EETTTCCEEECSSCSCSSCEEEEEECTTS
T ss_pred cEEE--EECCCCceeeecccCCcceEEEEEECCCC
Confidence 5555 47888887665422 2233344556444
No 225
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.55 E-value=8.7e-13 Score=140.01 Aligned_cols=269 Identities=13% Similarity=0.052 Sum_probs=150.1
Q ss_pred eEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCC--CCCeEEEEec-CCcceEEEecCCccccc
Q 004149 72 KFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN--ESPIQFELWS-QSQLEKEFHVPQTVHGS 148 (771)
Q Consensus 72 ~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~g~ 148 (771)
..++++.++...+...+++.. ........+|||||++|++....++ +.-.+|.+.. ++..+.+........
T Consensus 27 ~~i~~~~~d~~~g~~~~~~~~----~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~-- 100 (361)
T 3scy_A 27 KGIYTFRFNEETGESLPLSDA----EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGA-- 100 (361)
T ss_dssp CEEEEEEEETTTCCEEEEEEE----ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSS--
T ss_pred CCEEEEEEeCCCCCEEEeecc----cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCC--
Confidence 456666665555554444322 1244566899999999988776521 3334466663 355555544321110
Q ss_pred ccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCC
Q 004149 149 VYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG 228 (771)
Q Consensus 149 ~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~ 228 (771)
....+++ ||++|+..... ...+.+|++...
T Consensus 101 -----~p~~~~~--dg~~l~~~~~~-------------------------------------------~~~v~~~~~~~~ 130 (361)
T 3scy_A 101 -----DPCYLTT--NGKNIVTANYS-------------------------------------------GGSITVFPIGQD 130 (361)
T ss_dssp -----CEEEEEE--CSSEEEEEETT-------------------------------------------TTEEEEEEBCTT
T ss_pred -----CcEEEEE--CCCEEEEEECC-------------------------------------------CCEEEEEEeCCC
Confidence 0024455 89877765321 256777877542
Q ss_pred -ceeecc---CCCC---------CCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhh
Q 004149 229 -EVQAVK---GIPK---------SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 295 (771)
Q Consensus 229 -~~~~l~---~~~~---------~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~ 295 (771)
.+..+. .... ...+..++|||||+. |++... ....|++++++.
T Consensus 131 g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~----l~~~~~--------------~~~~v~v~~~~~------ 186 (361)
T 3scy_A 131 GALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKY----LLADDL--------------GTDQIHKFNINP------ 186 (361)
T ss_dssp SCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSE----EEEEET--------------TTTEEEEEEECT------
T ss_pred CcCcccceeEEccCCCCCccccCCCcceEEEECCCCCE----EEEEeC--------------CCCEEEEEEEcC------
Confidence 222220 0000 112356899999997 776642 122566666521
Q ss_pred hhhhhcCCCCCC----c-c-------eecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCC
Q 004149 296 ELELKESSSEDL----P-V-------VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS 363 (771)
Q Consensus 296 ~~~~~~~~~~~~----~-~-------~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~ 363 (771)
.++ + . ............++|||||++|++..... ..|.++++.++....
T Consensus 187 ---------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~----------~~v~v~~~~~g~~~~ 247 (361)
T 3scy_A 187 ---------NANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIG----------GTVIAFRYADGMLDE 247 (361)
T ss_dssp ---------TCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT----------CEEEEEEEETTEEEE
T ss_pred ---------CCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCC----------CeEEEEEecCCceEE
Confidence 222 2 1 11122333467899999999887766432 358888877554311
Q ss_pred CccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeee-CCeeEEEEEECCCCcEEEecC--CCCCceeeEE
Q 004149 364 SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW-GSSQVIISVNVSSGELLRITP--AESNFSWSLL 440 (771)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~-~~~~~l~~~d~~tg~~~~l~~--~~~~~~~~~~ 440 (771)
+ ..+.... ..+. ....++|||||++|+++... .+...+|.++..+|+++.+.. .........|
T Consensus 248 ~-------~~~~~~~--~~~~-----~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~ 313 (361)
T 3scy_A 248 I-------QTVAADT--VNAQ-----GSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFII 313 (361)
T ss_dssp E-------EEEESCS--SCCC-----CEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEE
T ss_pred e-------EEEecCC--CCCC-----CcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEE
Confidence 1 0000000 0111 12367899999988776655 567788888877887665432 1223445789
Q ss_pred eecCCEEEEEEeC
Q 004149 441 TLDGDNIIAVSSS 453 (771)
Q Consensus 441 s~d~~~l~~~~s~ 453 (771)
+|||++|++....
T Consensus 314 spdg~~l~~~~~~ 326 (361)
T 3scy_A 314 TPNGKYLLVACRD 326 (361)
T ss_dssp CTTSCEEEEEETT
T ss_pred CCCCCEEEEEECC
Confidence 9999988877643
No 226
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.55 E-value=4.3e-13 Score=144.00 Aligned_cols=245 Identities=11% Similarity=0.104 Sum_probs=158.2
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeE
Q 004149 47 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 126 (771)
Q Consensus 47 ~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 126 (771)
...++||+.|+++... .+.++++++.. ++..+..... ..+...+|||||++|++....+ ..+
T Consensus 37 ~~~s~dg~~l~~~~~~--------d~~i~v~d~~~--~~~~~~~~~~-----~~v~~~~~spdg~~l~~~~~~~---~~v 98 (391)
T 1l0q_A 37 AVISPDGTKVYVANAH--------SNDVSIIDTAT--NNVIATVPAG-----SSPQGVAVSPDGKQVYVTNMAS---STL 98 (391)
T ss_dssp EEECTTSSEEEEEEGG--------GTEEEEEETTT--TEEEEEEECS-----SSEEEEEECTTSSEEEEEETTT---TEE
T ss_pred EEECCCCCEEEEECCC--------CCeEEEEECCC--CeEEEEEECC-----CCccceEECCCCCEEEEEECCC---CEE
Confidence 3457799887665422 24677777532 2333222222 3577899999999998765432 235
Q ss_pred EEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCccccc
Q 004149 127 FELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 205 (771)
Q Consensus 127 ~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (771)
+.++ ..++....+...... .+++|+|||++|++...
T Consensus 99 ~v~d~~~~~~~~~~~~~~~~----------~~~~~s~dg~~l~~~~~--------------------------------- 135 (391)
T 1l0q_A 99 SVIDTTSNTVAGTVKTGKSP----------LGLALSPDGKKLYVTNN--------------------------------- 135 (391)
T ss_dssp EEEETTTTEEEEEEECSSSE----------EEEEECTTSSEEEEEET---------------------------------
T ss_pred EEEECCCCeEEEEEeCCCCc----------ceEEECCCCCEEEEEeC---------------------------------
Confidence 5444 444444444433332 58999999999877643
Q ss_pred CCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEE
Q 004149 206 EDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 285 (771)
Q Consensus 206 ~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~ 285 (771)
....|++||+.+++.... ......+..+.|+|||+. |++++. ....|+++
T Consensus 136 ----------~~~~v~~~d~~~~~~~~~--~~~~~~~~~~~~~~dg~~----l~~~~~--------------~~~~v~~~ 185 (391)
T 1l0q_A 136 ----------GDKTVSVINTVTKAVINT--VSVGRSPKGIAVTPDGTK----VYVANF--------------DSMSISVI 185 (391)
T ss_dssp ----------TTTEEEEEETTTTEEEEE--EECCSSEEEEEECTTSSE----EEEEET--------------TTTEEEEE
T ss_pred ----------CCCEEEEEECCCCcEEEE--EecCCCcceEEECCCCCE----EEEEeC--------------CCCEEEEE
Confidence 236899999999887666 344445678999999997 766541 23479999
Q ss_pred ecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCc
Q 004149 286 RVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSL 365 (771)
Q Consensus 286 d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~ 365 (771)
|+ .+++...............|+|||++|+....+. ....|+++|+.+++....
T Consensus 186 d~-----------------~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~--------~~~~v~~~d~~~~~~~~~- 239 (391)
T 1l0q_A 186 DT-----------------VTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDK--------YFNTVSMIDTGTNKITAR- 239 (391)
T ss_dssp ET-----------------TTTEEEEEEECSSEEEEEEECTTSSEEEEEEECS--------SCCEEEEEETTTTEEEEE-
T ss_pred EC-----------------CCCeEEEEEecCCCccceEECCCCCEEEEEecCc--------CCCcEEEEECCCCeEEEE-
Confidence 98 5665554444455677899999999988877521 135699999877543211
Q ss_pred cceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 004149 366 EKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 429 (771)
Q Consensus 366 ~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 429 (771)
+... ..+..++|+|||+.|+++...++ .+..+|+.++++....
T Consensus 240 ---------~~~~----------~~~~~~~~s~dg~~l~~s~~~d~--~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 240 ---------IPVG----------PDPAGIAVTPDGKKVYVALSFXN--TVSVIDTATNTITATM 282 (391)
T ss_dssp ---------EECC----------SSEEEEEECTTSSEEEEEETTTT--EEEEEETTTTEEEEEE
T ss_pred ---------EecC----------CCccEEEEccCCCEEEEEcCCCC--EEEEEECCCCcEEEEE
Confidence 1000 01235689999998877765454 4666788888766543
No 227
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=99.54 E-value=3.2e-14 Score=144.91 Aligned_cols=228 Identities=14% Similarity=0.149 Sum_probs=128.8
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccc
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 596 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~ 596 (771)
+|..+++... +. +...|+||++||.+.+ ...|...+..|+ .+|.|+++|+|| +|.+... .....
T Consensus 12 ~g~~l~y~~~-~~----G~~~p~vvllHG~~~~--~~~w~~~~~~L~-~~~rvia~DlrG---hG~S~~~-----~~~~~ 75 (276)
T 2wj6_A 12 FDNKLSYIDN-QR----DTDGPAILLLPGWCHD--HRVYKYLIQELD-ADFRVIVPNWRG---HGLSPSE-----VPDFG 75 (276)
T ss_dssp TTEEEEEEEC-CC----CCSSCEEEEECCTTCC--GGGGHHHHHHHT-TTSCEEEECCTT---CSSSCCC-----CCCCC
T ss_pred CCeEEEEEEe-cC----CCCCCeEEEECCCCCc--HHHHHHHHHHHh-cCCEEEEeCCCC---CCCCCCC-----CCCCC
Confidence 4666655433 11 1234789999997655 457888888886 479999999999 5554321 11223
Q ss_pred hhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhC-CCceeEEEecCCccch-----hh-hhcCCCCCcch---
Q 004149 597 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNL-----AL-MVGTTDIPDWC--- 666 (771)
Q Consensus 597 ~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~p~~~~-----~~-~~~~~~~~~~~--- 666 (771)
++++.+.+..+++. .+.+++.|+||||||.+++.+|.++ |++++++|+.++.... .. .........|.
T Consensus 76 ~~~~a~dl~~ll~~--l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (276)
T 2wj6_A 76 YQEQVKDALEILDQ--LGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLLKDPERWREGT 153 (276)
T ss_dssp HHHHHHHHHHHHHH--HTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHHHHHHHHCTTTHHHHH
T ss_pred HHHHHHHHHHHHHH--hCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHHHhhhccCcchHHHHH
Confidence 44444444444443 2346899999999999999999999 9999999998764210 00 00000000110
Q ss_pred --hhhhccCCC---------CCcCCCCCChhhH----H----HHh-hcCccccccCCCCcEEEEeeCCCCccC--cHHHH
Q 004149 667 --YVESYGSKG---------KDSFTESPSVEDL----T----RFH-SKSPISHISKVKTPTIFLLGAQDLRVP--VSNGL 724 (771)
Q Consensus 667 --~~~~~~~~~---------~~~~~~~~~~~~~----~----~~~-~~sp~~~~~~i~~P~Lii~G~~D~~vp--~~~~~ 724 (771)
+...+.... ...... ...... . .+. ..++...+.++++|+|+++|..|...+ .....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~~~~~~~~~~ 232 (276)
T 2wj6_A 154 HGLFDVWLDGHDEKRVRHHLLEEMAD-YGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPEYEKINS 232 (276)
T ss_dssp HHHHHHHHTTBCCHHHHHHHHTTTTT-CCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCSCSHHHHHHHH
T ss_pred HHHHHHhhcccchHHHHHHHHHHhhh-cchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCccchhHHHHHH
Confidence 000000000 000000 000000 0 000 012234567889999998874443322 12223
Q ss_pred HHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHHHHH
Q 004149 725 QYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 725 ~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
.+.+. -...++++++++||.... +...++.+.+.+||++
T Consensus 233 ~~~~~----~p~a~~~~i~~~gH~~~~-e~P~~~~~~i~~Fl~~ 271 (276)
T 2wj6_A 233 DFAEQ----HPWFSYAKLGGPTHFPAI-DVPDRAAVHIREFATA 271 (276)
T ss_dssp HHHHH----CTTEEEEECCCSSSCHHH-HSHHHHHHHHHHHHHH
T ss_pred HHHhh----CCCeEEEEeCCCCCcccc-cCHHHHHHHHHHHHhh
Confidence 33332 335899999999997653 3456888899999975
No 228
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.54 E-value=2.6e-12 Score=135.56 Aligned_cols=249 Identities=12% Similarity=0.104 Sum_probs=157.5
Q ss_pred cceEEEeCCCCCeEEEEecCCC---CCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCC
Q 004149 100 GASAVVPSPSGSKLLVVRNPEN---ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 175 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~ 175 (771)
....++|||||++|++...... ....++.++ .+++..+.+...... ..+.|||||++|++....
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~----------~~~~~s~dg~~l~v~~~~-- 109 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKP----------FGATINNTTQTLWFGNTV-- 109 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCC----------CSEEEETTTTEEEEEETT--
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCc----------ceEEECCCCCEEEEEecC--
Confidence 3567899999999966654321 134566666 555555555544333 489999999987775332
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCC--------ccceEEE
Q 004149 176 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSL--------SVGQVVW 247 (771)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~--------~~~~~~w 247 (771)
...|+++|+.+++........... .+..++|
T Consensus 110 -----------------------------------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (353)
T 3vgz_A 110 -----------------------------------------NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVA 148 (353)
T ss_dssp -----------------------------------------TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEE
T ss_pred -----------------------------------------CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEE
Confidence 258999999988864431121111 2567899
Q ss_pred ecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCC-CCccccceeecC
Q 004149 248 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSP 326 (771)
Q Consensus 248 spDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~~~~~~p~~Sp 326 (771)
+|||+. |++..+. ....|+++|+ .+++...... .........|||
T Consensus 149 s~dg~~----l~~~~~~-------------~~~~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 149 DDATNT----VYISGIG-------------KESVIWVVDG-----------------GNIKLKTAIQNTGKMSTGLALDS 194 (353)
T ss_dssp ETTTTE----EEEEEES-------------SSCEEEEEET-----------------TTTEEEEEECCCCTTCCCCEEET
T ss_pred CCCCCE----EEEEecC-------------CCceEEEEcC-----------------CCCceEEEecCCCCccceEEECC
Confidence 999997 7666521 2347999998 6665544333 344477899999
Q ss_pred CCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEE
Q 004149 327 DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLS 406 (771)
Q Consensus 327 DG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~ 406 (771)
||++|++.... ..|+++|+.+++.... +........ .....++|+|||+.|+++
T Consensus 195 dg~~l~~~~~~-----------~~i~~~d~~~~~~~~~----------~~~~~~~~~-----~~~~~~~~s~dg~~l~~~ 248 (353)
T 3vgz_A 195 EGKRLYTTNAD-----------GELITIDTADNKILSR----------KKLLDDGKE-----HFFINISLDTARQRAFIT 248 (353)
T ss_dssp TTTEEEEECTT-----------SEEEEEETTTTEEEEE----------EECCCSSSC-----CCEEEEEEETTTTEEEEE
T ss_pred CCCEEEEEcCC-----------CeEEEEECCCCeEEEE----------EEcCCCCCC-----cccceEEECCCCCEEEEE
Confidence 99998776542 3588999877653211 111000000 012346899999988766
Q ss_pred eeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004149 407 SIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 407 ~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~ 467 (771)
.. ....|+.+|+.+++......... .....++++++.+++..... ..|++.+..+
T Consensus 249 ~~--~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~s~dg~~l~v~~~~~---~~v~~~d~~~ 303 (353)
T 3vgz_A 249 DS--KAAEVLVVDTRNGNILAKVAAPE-SLAVLFNPARNEAYVTHRQA---GKVSVIDAKS 303 (353)
T ss_dssp ES--SSSEEEEEETTTCCEEEEEECSS-CCCEEEETTTTEEEEEETTT---TEEEEEETTT
T ss_pred eC--CCCEEEEEECCCCcEEEEEEcCC-CceEEECCCCCEEEEEECCC---CeEEEEECCC
Confidence 53 33568888998888665443322 23478999999887766432 4677777543
No 229
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.53 E-value=1.9e-13 Score=149.00 Aligned_cols=290 Identities=9% Similarity=-0.019 Sum_probs=174.7
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCC--cccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004149 101 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQ--TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
...++||| ++.+++....+ ..+..++ ..++..+.+.... ... +...++.|+|||+.++....+....
T Consensus 125 ~~~~~~s~-~~~~~~~~~~~---~~i~~~d~~~g~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~~s~~~d~~v~ 194 (433)
T 3bws_A 125 PKSVRFID-NTRLAIPLLED---EGMDVLDINSGQTVRLSPPEKYKKKL------GFVETISIPEHNELWVSQMQANAVH 194 (433)
T ss_dssp BCCCEESS-SSEEEEEBTTS---SSEEEEETTTCCEEEECCCHHHHTTC------CEEEEEEEGGGTEEEEEEGGGTEEE
T ss_pred ceEEEEeC-CCeEEEEeCCC---CeEEEEECCCCeEeeecCcccccccC------CceeEEEEcCCCEEEEEECCCCEEE
Confidence 45789999 55666654432 2344444 4444443332211 111 1235789999998766655443221
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCc-cCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004149 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGK-RQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~-~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
.|+............+........|+++....++.. ....|++||+.+++.... ......+..++|+|||+.
T Consensus 195 --~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~--~~~~~~~~~~~~~~~g~~--- 267 (433)
T 3bws_A 195 --VFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK--TDKIGLPRGLLLSKDGKE--- 267 (433)
T ss_dssp --EEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE--CCCCSEEEEEEECTTSSE---
T ss_pred --EEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE--ecCCCCceEEEEcCCCCE---
Confidence 232211111111112223334566788755554333 567999999999887666 455556788999999997
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEec
Q 004149 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~ 336 (771)
|++.+...... ...+..|+++|+ .+++.............+.|+|||+.|++...
T Consensus 268 -l~~~~~~~~~~-------~~~dg~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~ 322 (433)
T 3bws_A 268 -LYIAQFSASNQ-------ESGGGRLGIYSM-----------------DKEKLIDTIGPPGNKRHIVSGNTENKIYVSDM 322 (433)
T ss_dssp -EEEEEEESCTT-------CSCCEEEEEEET-----------------TTTEEEEEEEEEECEEEEEECSSTTEEEEEET
T ss_pred -EEEEECCCCcc-------ccCCCeEEEEEC-----------------CCCcEEeeccCCCCcceEEECCCCCEEEEEec
Confidence 77776422110 012347999998 55655444444446778999999998877764
Q ss_pred CCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCe----
Q 004149 337 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSS---- 412 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~---- 412 (771)
.+ ..|++||+.+++.... +.. ...+..++|+|||+.|++.....+.
T Consensus 323 ~~----------~~v~v~d~~~~~~~~~----------~~~----------~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 372 (433)
T 3bws_A 323 CC----------SKIEVYDLKEKKVQKS----------IPV----------FDKPNTIALSPDGKYLYVSCRGPNHPTEG 372 (433)
T ss_dssp TT----------TEEEEEETTTTEEEEE----------EEC----------SSSEEEEEECTTSSEEEEEECCCCCTTTC
T ss_pred CC----------CEEEEEECCCCcEEEE----------ecC----------CCCCCeEEEcCCCCEEEEEecCCCccccc
Confidence 43 4689999886543211 100 0123467899999988777654432
Q ss_pred --------eEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEe
Q 004149 413 --------QVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 465 (771)
Q Consensus 413 --------~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~ 465 (771)
..|+.+|+.+++...............|+++|+.|++..... ..+++.++
T Consensus 373 ~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d---~~i~v~~~ 430 (433)
T 3bws_A 373 YLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLD---HQIRVYRR 430 (433)
T ss_dssp TTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTT---TEEEEEEE
T ss_pred cccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCC---CeEEEEEe
Confidence 379999999998776655544456678999999887665422 34555554
No 230
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.53 E-value=4.5e-13 Score=152.97 Aligned_cols=184 Identities=9% Similarity=0.009 Sum_probs=109.6
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEE
Q 004149 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFEL 129 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~ 129 (771)
||||++|+-. ...+.+.+|++...... ...+... ..+.+...+|||||++||...... +......+
T Consensus 68 spdg~~lasg---------~~d~~v~lWd~~~~~~~-~~~~~~~---~~~~v~~v~fs~dg~~l~~~~~~~-~~~~~v~~ 133 (611)
T 1nr0_A 68 SPSGYYCASG---------DVHGNVRIWDTTQTTHI-LKTTIPV---FSGPVKDISWDSESKRIAAVGEGR-ERFGHVFL 133 (611)
T ss_dssp CTTSSEEEEE---------ETTSEEEEEESSSTTCC-EEEEEEC---SSSCEEEEEECTTSCEEEEEECCS-SCSEEEEE
T ss_pred CCCCcEEEEE---------eCCCCEEEeECCCCcce-eeEeecc---cCCceEEEEECCCCCEEEEEECCC-CceeEEEE
Confidence 5666666543 33457777776433221 1111111 125688999999999999876543 22234555
Q ss_pred ecCCcceEEEecCCcccccccCCCcccceeecCCCCe-EEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCc
Q 004149 130 WSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETL-IAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDW 208 (771)
Q Consensus 130 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~-la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 208 (771)
|+.+.....+. +..+ .+..++|+||++. |+..+.+...+ .|+............+..+...+.|++|.
T Consensus 134 wd~~~~~~~l~---gh~~------~v~~v~f~p~~~~~l~s~s~D~~v~--lwd~~~~~~~~~l~~H~~~V~~v~fspdg 202 (611)
T 1nr0_A 134 FDTGTSNGNLT---GQAR------AMNSVDFKPSRPFRIISGSDDNTVA--IFEGPPFKFKSTFGEHTKFVHSVRYNPDG 202 (611)
T ss_dssp TTTCCBCBCCC---CCSS------CEEEEEECSSSSCEEEEEETTSCEE--EEETTTBEEEEEECCCSSCEEEEEECTTS
T ss_pred eeCCCCcceec---CCCC------CceEEEECCCCCeEEEEEeCCCeEE--EEECCCCeEeeeeccccCceEEEEECCCC
Confidence 65443322111 1111 2368999999984 77766665432 33322111112233455566678899996
Q ss_pred CcccCCccCceEEEEEccCCceeeccCC------CCCCccceEEEecCCCCCccEEEEEe
Q 004149 209 GETYAGKRQPSLFVININSGEVQAVKGI------PKSLSVGQVVWAPLNEGLHQYLVFVG 262 (771)
Q Consensus 209 g~~~~~~~~~~l~v~d~~~~~~~~l~~~------~~~~~~~~~~wspDg~~~~~~l~~~~ 262 (771)
...+++..+..|.+||+.+++....... .....+..++|+|||+. |+..+
T Consensus 203 ~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~----l~s~s 258 (611)
T 1nr0_A 203 SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK----IASAS 258 (611)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSE----EEEEE
T ss_pred CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCE----EEEEe
Confidence 6666777789999999988876544100 23446788999999997 77666
No 231
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.53 E-value=1.4e-12 Score=137.16 Aligned_cols=231 Identities=11% Similarity=0.043 Sum_probs=146.0
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEec-CCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004149 100 GASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
.+...+||||++ |+..+.. + .+.+| ..++....... ..+..+. +.+++|||||++|+..+.+
T Consensus 84 ~v~~~~~s~d~~-l~~~s~d--g---~v~lWd~~~~~~~~~~~~~~~~H~~~------V~~v~~spdg~~l~sgs~d--- 148 (344)
T 4gqb_B 84 GVADLTWVGERG-ILVASDS--G---AVELWELDENETLIVSKFCKYEHDDI------VSTVSVLSSGTQAVSGSKD--- 148 (344)
T ss_dssp CEEEEEEETTTE-EEEEETT--S---EEEEEEECTTSSCEEEEEEEECCSSC------EEEEEECTTSSEEEEEETT---
T ss_pred CEEEEEEeCCCe-EEEEECC--C---EEEEEeccCCCceeEeeccccCCCCC------EEEEEECCCCCEEEEEeCC---
Confidence 478899999974 5554443 2 44555 23333222221 1111122 3689999999999886433
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004149 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
..|.+||+.+++..... ......+..+.|+||++.
T Consensus 149 -----------------------------------------~~i~iwd~~~~~~~~~~-~~h~~~V~~~~~~~~~~~--- 183 (344)
T 4gqb_B 149 -----------------------------------------ICIKVWDLAQQVVLSSY-RAHAAQVTCVAASPHKDS--- 183 (344)
T ss_dssp -----------------------------------------SCEEEEETTTTEEEEEE-CCCSSCEEEEEECSSCTT---
T ss_pred -----------------------------------------CeEEEEECCCCcEEEEE-cCcCCceEEEEecCCCCC---
Confidence 57899999998865541 334557888999999988
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eecCC--CCccccceeecCCCCEEEE
Q 004149 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTE--SISSAFFPRFSPDGKFLVF 333 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt~--~~~~~~~p~~SpDG~~l~f 333 (771)
++.++. .+..|.++|+ .+++. ..+.. ....+.+..|+|++..++.
T Consensus 184 -~l~s~s--------------~D~~v~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 231 (344)
T 4gqb_B 184 -VFLSCS--------------EDNRILLWDT-----------------RCPKPASQIGCSAPGYLPTSLAWHPQQSEVFV 231 (344)
T ss_dssp -EEEEEE--------------TTSCEEEEET-----------------TSSSCEEECC----CCCEEEEEECSSCTTEEE
T ss_pred -ceeeec--------------cccccccccc-----------------cccceeeeeecceeeccceeeeecCCCCcceE
Confidence 766552 2336888888 55543 33432 2334678999997665443
Q ss_pred EecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCee
Q 004149 334 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 413 (771)
Q Consensus 334 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 413 (771)
....+ ..|.+||+.+++....... +...+..++|+|||..++++.+.++..
T Consensus 232 sg~~d----------g~v~~wd~~~~~~~~~~~~-------------------h~~~v~~v~fsp~g~~~lasgs~D~~i 282 (344)
T 4gqb_B 232 FGDEN----------GTVSLVDTKSTSCVLSSAV-------------------HSQCVTGLVFSPHSVPFLASLSEDCSL 282 (344)
T ss_dssp EEETT----------SEEEEEESCC--CCEEEEC-------------------CSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred EeccC----------CcEEEEECCCCcEEEEEcC-------------------CCCCEEEEEEccCCCeEEEEEeCCCeE
Confidence 33222 3588999887664321111 111345678999998777777777766
Q ss_pred EEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeC
Q 004149 414 VIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSS 453 (771)
Q Consensus 414 ~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~ 453 (771)
.|| |+.++++.++......+....|+|+++.++++.+.
T Consensus 283 ~vw--d~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~ 320 (344)
T 4gqb_B 283 AVL--DSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGW 320 (344)
T ss_dssp EEE--CTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEET
T ss_pred EEE--ECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcC
Confidence 665 88889888776555556667899999887766653
No 232
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.53 E-value=2.3e-12 Score=135.16 Aligned_cols=256 Identities=9% Similarity=-0.001 Sum_probs=147.2
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEE
Q 004149 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 128 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 128 (771)
.++||+.|++.... ...+.+++++...+....+...... ......+|||||++|++....+ +.-.+|.
T Consensus 45 ~spdg~~l~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~-~~i~~~d 112 (343)
T 1ri6_A 45 VSPDKRYLYVGVRP--------EFRVLAYRIAPDDGALTFAAESALP---GSLTHISTDHQGQFVFVGSYNA-GNVSVTR 112 (343)
T ss_dssp ECTTSSEEEEEETT--------TTEEEEEEECTTTCCEEEEEEEECS---SCCSEEEECTTSSEEEEEETTT-TEEEEEE
T ss_pred ECCCCCEEEEeecC--------CCeEEEEEecCCCCceeeccccccC---CCCcEEEEcCCCCEEEEEecCC-CeEEEEE
Confidence 36789887775432 1356666665333333333221111 2467789999999987765432 3233333
Q ss_pred EecCCcceEEEec-CCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCC
Q 004149 129 LWSQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEED 207 (771)
Q Consensus 129 ~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 207 (771)
+. .+........ .... ....++|||||++|+....
T Consensus 113 ~~-~~~~~~~~~~~~~~~--------~~~~~~~s~dg~~l~~~~~----------------------------------- 148 (343)
T 1ri6_A 113 LE-DGLPVGVVDVVEGLD--------GCHSANISPDNRTLWVPAL----------------------------------- 148 (343)
T ss_dssp EE-TTEEEEEEEEECCCT--------TBCCCEECTTSSEEEEEEG-----------------------------------
T ss_pred CC-CCccccccccccCCC--------CceEEEECCCCCEEEEecC-----------------------------------
Confidence 32 3322222221 1110 1258899999998876532
Q ss_pred cCcccCCccCceEEEEEccC-Cceeecc----CCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCcee
Q 004149 208 WGETYAGKRQPSLFVININS-GEVQAVK----GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCAL 282 (771)
Q Consensus 208 ~g~~~~~~~~~~l~v~d~~~-~~~~~l~----~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l 282 (771)
....|++||+.+ ++...+. ..+....+..++|+|||+. |+++.. ....|
T Consensus 149 --------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~----l~~~~~--------------~~~~i 202 (343)
T 1ri6_A 149 --------KQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY----AYCVNE--------------LNSSV 202 (343)
T ss_dssp --------GGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSE----EEEEET--------------TTTEE
T ss_pred --------CCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCE----EEEEeC--------------CCCEE
Confidence 225789999987 6654220 0223345667899999997 766641 22367
Q ss_pred EEEecccccchhhhhhhhcCCCCCCccee------cCCC---CccccceeecCCCCEEEEEecCCCCCCCCcccccccee
Q 004149 283 YAVRVSLYKSEASELELKESSSEDLPVVN------LTES---ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHR 353 (771)
Q Consensus 283 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~------lt~~---~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~ 353 (771)
.+++++. .+++.+. +... ......+.|||||++|++....+ ..|.+
T Consensus 203 ~~~~~~~---------------~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~----------~~i~v 257 (343)
T 1ri6_A 203 DVWELKD---------------PHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA----------SLITV 257 (343)
T ss_dssp EEEESSC---------------TTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT----------TEEEE
T ss_pred EEEEecC---------------CCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC----------CEEEE
Confidence 7777621 2232211 1111 12344689999999886655332 45888
Q ss_pred eecCC--CCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 004149 354 IDWPT--NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 429 (771)
Q Consensus 354 ~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 429 (771)
+++.. +..+.+ ..+.. . ..+..++|+|||+.|++....++...+|.+|..+|+++.+.
T Consensus 258 ~d~~~~~~~~~~~--------~~~~~--~--------~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 258 FSVSEDGSVLSKE--------GFQPT--E--------TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp EEECTTSCCEEEE--------EEEEC--S--------SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEE
T ss_pred EEEcCCCCceEEe--------eeecC--C--------CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcc
Confidence 88763 221111 11100 0 12457889999998887766678888999999998877654
No 233
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.53 E-value=1.5e-13 Score=155.92 Aligned_cols=263 Identities=17% Similarity=0.149 Sum_probs=167.1
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEec-CCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
..+...+|||||+.|+.....+ .+.+| ..+........ ... ..+++|||||+.|+....+...
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~d~-----~i~~w~~~~~~~~~~~~~~~~----------v~~~~~s~~g~~l~~~~~dg~v 368 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASDDK-----TVKLWNRNGQHLQTLTGHSSS----------VWGVAFSPDGQTIASASDDKTV 368 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTSCEEEEECCCSSC----------EEEEEECTTSSEEEEEETTSEE
T ss_pred CCeEEEEECCCCCEEEEEeCCC-----eEEEEeCCCCeeEEEeCCCCC----------EEEEEECCCCCEEEEEeCCCEE
Confidence 4577889999999998876543 45666 33332222221 112 2588999999999988765432
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004149 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
+ .|+. ..........+........|++|....+++.....|.+||..+.....+ ......+..++|+||++.
T Consensus 369 ~--~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~--~~~~~~v~~~~~s~d~~~--- 440 (577)
T 2ymu_A 369 K--LWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL--TGHSSSVWGVAFSPDDQT--- 440 (577)
T ss_dssp E--EEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEE--ECCSSCEEEEEECTTSSE---
T ss_pred E--EEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEe--cCCCCCeEEEEECCCCCE---
Confidence 2 2221 1111111122333334567888865566666778999999876666666 344556788999999997
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEec
Q 004149 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~ 336 (771)
|+..+ .+..|.++|+ .+.....+..+...+....|||||+.|+..+.
T Consensus 441 -l~~~~---------------~d~~v~~w~~-----------------~~~~~~~~~~~~~~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 441 -IASAS---------------DDKTVKLWNR-----------------NGQLLQTLTGHSSSVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp -EEEEE---------------TTSEEEEEET-----------------TSCEEEEEECCSSCEEEEEECTTSCEEEEEET
T ss_pred -EEEEc---------------CCCEEEEEEC-----------------CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 77665 2336778886 55566777777778899999999999987765
Q ss_pred CCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 004149 337 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 416 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~ 416 (771)
+. .|.+||..+ +..+ .+.. +...+..++|||||+.| ++...++...||
T Consensus 488 d~-----------~i~iw~~~~-~~~~----------~~~~---------h~~~v~~l~~s~dg~~l-~s~~~dg~v~lw 535 (577)
T 2ymu_A 488 DK-----------TVKLWNRNG-QLLQ----------TLTG---------HSSSVRGVAFSPDGQTI-ASASDDKTVKLW 535 (577)
T ss_dssp TS-----------EEEEEETTS-CEEE----------EEEC---------CSSCEEEEEECTTSSCE-EEEETTSEEEEE
T ss_pred CC-----------EEEEEcCCC-CEEE----------EEeC---------CCCCEEEEEEcCCCCEE-EEEECcCEEEEE
Confidence 42 478888543 2111 0000 11234567899999966 455556655555
Q ss_pred EEECCCCcEEEecCCCCCceeeEEeecCCEEEEEE
Q 004149 417 SVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 417 ~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~ 451 (771)
|..+..+..+......+....|++|++.|+...
T Consensus 536 --d~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~ 568 (577)
T 2ymu_A 536 --NRNGQLLQTLTGHSSSVWGVAFSPDGQTIASAS 568 (577)
T ss_dssp --CTTSCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred --eCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 664444555555445566678999999877544
No 234
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.53 E-value=3.9e-12 Score=133.42 Aligned_cols=244 Identities=15% Similarity=0.130 Sum_probs=140.2
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
......+|||||++|++..... +.-.+|.+. .++..+.+...... + ....++|||||++|++....
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~s~dg~~l~~~~~~---- 104 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPE-FRVLAYRIAPDDGALTFAAESALP--G------SLTHISTDHQGQFVFVGSYN---- 104 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTT-TEEEEEEECTTTCCEEEEEEEECS--S------CCSEEEECTTSSEEEEEETT----
T ss_pred CCCceEEECCCCCEEEEeecCC-CeEEEEEecCCCCceeeccccccC--C------CCcEEEEcCCCCEEEEEecC----
Confidence 3466789999999998776542 333344444 24444444333211 0 11589999999988776432
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCC---ceeeccCCCCCCccceEEEecCCCCC
Q 004149 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG---EVQAVKGIPKSLSVGQVVWAPLNEGL 254 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~---~~~~l~~~~~~~~~~~~~wspDg~~~ 254 (771)
...|++||+..+ +.... ......+..++|+|||+.
T Consensus 105 ---------------------------------------~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~s~dg~~- 142 (343)
T 1ri6_A 105 ---------------------------------------AGNVSVTRLEDGLPVGVVDV--VEGLDGCHSANISPDNRT- 142 (343)
T ss_dssp ---------------------------------------TTEEEEEEEETTEEEEEEEE--ECCCTTBCCCEECTTSSE-
T ss_pred ---------------------------------------CCeEEEEECCCCcccccccc--ccCCCCceEEEECCCCCE-
Confidence 256888888433 33333 233345778899999997
Q ss_pred ccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCC-Cccee-----cCC-CCccccceeecCC
Q 004149 255 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-LPVVN-----LTE-SISSAFFPRFSPD 327 (771)
Q Consensus 255 ~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~-----lt~-~~~~~~~p~~SpD 327 (771)
|++... ....|+++|+ .+ ++... +.. .........|+||
T Consensus 143 ---l~~~~~--------------~~~~v~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd 188 (343)
T 1ri6_A 143 ---LWVPAL--------------KQDRICLFTV-----------------SDDGHLVAQDPAEVTTVEGAGPRHMVFHPN 188 (343)
T ss_dssp ---EEEEEG--------------GGTEEEEEEE-----------------CTTSCEEEEEEEEEECSTTCCEEEEEECTT
T ss_pred ---EEEecC--------------CCCEEEEEEe-----------------cCCCceeeecccccccCCCCCcceEEECCC
Confidence 765541 2236888887 33 44332 221 2234567889999
Q ss_pred CCEEEEEecCCCCCCCCccccccceeeecCC--CCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEE
Q 004149 328 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPT--NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLL 405 (771)
Q Consensus 328 G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~ 405 (771)
|++|++..... ..|.++++.. +....+ ....... ..+.+ ......++|+|||+.|++
T Consensus 189 g~~l~~~~~~~----------~~i~~~~~~~~~g~~~~~-----~~~~~~~----~~~~~--~~~~~~i~~s~dg~~l~v 247 (343)
T 1ri6_A 189 EQYAYCVNELN----------SSVDVWELKDPHGNIECV-----QTLDMMP----ENFSD--TRWAADIHITPDGRHLYA 247 (343)
T ss_dssp SSEEEEEETTT----------TEEEEEESSCTTSCCEEE-----EEEECSC----TTCCS--CCCEEEEEECTTSSEEEE
T ss_pred CCEEEEEeCCC----------CEEEEEEecCCCCcEEEE-----eeccccC----ccccc--cCCccceEECCCCCEEEE
Confidence 99887776432 3578888753 322110 0011000 00100 001225789999998877
Q ss_pred EeeeCCeeEEEEEECCCCcEEEec--CCCCCceeeEEeecCCEEEEEEe
Q 004149 406 SSIWGSSQVIISVNVSSGELLRIT--PAESNFSWSLLTLDGDNIIAVSS 452 (771)
Q Consensus 406 ~~~~~~~~~l~~~d~~tg~~~~l~--~~~~~~~~~~~s~d~~~l~~~~s 452 (771)
+...++...+|.++..+++.+.+. ..........|+++|+.|++...
T Consensus 248 ~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 296 (343)
T 1ri6_A 248 CDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQ 296 (343)
T ss_dssp EETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECT
T ss_pred EecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecC
Confidence 665556656665554466555442 12222455789999998876653
No 235
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=99.53 E-value=6.6e-15 Score=150.41 Aligned_cols=213 Identities=11% Similarity=0.028 Sum_probs=117.5
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004149 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
..|.||++||.+.. ...|...+..|++ ||.|+++|+|| +|.+... .....++++.+.+..+++.. ...
T Consensus 50 ~~~~lvllHG~~~~--~~~~~~l~~~L~~-~~~v~~~D~~G---~G~S~~~-----~~~~~~~~~a~~~~~~l~~~-~~~ 117 (280)
T 3qmv_A 50 APLRLVCFPYAGGT--VSAFRGWQERLGD-EVAVVPVQLPG---RGLRLRE-----RPYDTMEPLAEAVADALEEH-RLT 117 (280)
T ss_dssp CSEEEEEECCTTCC--GGGGTTHHHHHCT-TEEEEECCCTT---SGGGTTS-----CCCCSHHHHHHHHHHHHHHT-TCS
T ss_pred CCceEEEECCCCCC--hHHHHHHHHhcCC-CceEEEEeCCC---CCCCCCC-----CCCCCHHHHHHHHHHHHHHh-CCC
Confidence 34889999997655 4467778888876 99999999999 5554321 11223444444444443331 135
Q ss_pred CeEEEEEcChhHHHHHHHHHhCCCcee----EEEecCCccchhhhhc-CCCCCcchh---hhhccCCCCC-----cCCCC
Q 004149 616 SKVTVVGGSHGGFLTTHLIGQAPDKFV----AAAARNPLCNLALMVG-TTDIPDWCY---VESYGSKGKD-----SFTES 682 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~p~~~~----a~v~~~p~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~-----~~~~~ 682 (771)
+++.|+||||||.+++.+|.++|+++. .+++.+.......... ........+ ...++..... .+...
T Consensus 118 ~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (280)
T 3qmv_A 118 HDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDR 197 (280)
T ss_dssp SSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC---------CCT
T ss_pred CCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChhhhcCHHHHHH
Confidence 789999999999999999998887655 5555443221100000 000000000 0000000000 00000
Q ss_pred CC---hhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCC-CCChHHH
Q 004149 683 PS---VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER-PQSDFES 758 (771)
Q Consensus 683 ~~---~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~-~~~~~~~ 758 (771)
.. ...........+ ..+.++++|+|+++|++|..++++.+..+.+.+. ..++++++++ ||.... .+...++
T Consensus 198 ~~~~~~~~~~~~~~~~~-~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~---~~~~~~~~~g-gH~~~~~~~~~~~~ 272 (280)
T 3qmv_A 198 RLPVLRADLRACERYDW-HPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTT---GSFLRRHLPG-NHFFLNGGPSRDRL 272 (280)
T ss_dssp THHHHHHHHHHHHTCCC-CCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBS---SCEEEEEEEE-ETTGGGSSHHHHHH
T ss_pred HHHHHHHHHHHHHhccc-cCCCceecCeEEEEecCCCCcChHHHHHHHHhcC---CceEEEEecC-CCeEEcCchhHHHH
Confidence 00 000111111111 1246789999999999999999887776655442 2467778875 897654 2333344
Q ss_pred HHHHHHH
Q 004149 759 FLNIGLW 765 (771)
Q Consensus 759 ~~~i~~w 765 (771)
.+.|.+|
T Consensus 273 ~~~i~~~ 279 (280)
T 3qmv_A 273 LAHLGTE 279 (280)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 4444443
No 236
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=99.52 E-value=7.7e-14 Score=143.23 Aligned_cols=120 Identities=14% Similarity=0.208 Sum_probs=79.7
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccc
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 594 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~ 594 (771)
+.+|.++++... + ..|.||++||.+.+ ...|...+..|+ .+|.|+++|+|| +|.+...........
T Consensus 11 ~~~~~~~~~~~~------g--~g~~~vllHG~~~~--~~~w~~~~~~l~-~~~~vi~~Dl~G---~G~s~~~~~~~~~~~ 76 (291)
T 3qyj_A 11 DTTEARINLVKA------G--HGAPLLLLHGYPQT--HVMWHKIAPLLA-NNFTVVATDLRG---YGDSSRPASVPHHIN 76 (291)
T ss_dssp ECSSCEEEEEEE------C--CSSEEEEECCTTCC--GGGGTTTHHHHT-TTSEEEEECCTT---STTSCCCCCCGGGGG
T ss_pred ecCCeEEEEEEc------C--CCCeEEEECCCCCC--HHHHHHHHHHHh-CCCEEEEEcCCC---CCCCCCCCCCccccc
Confidence 345667765432 1 24679999998765 446777777774 589999999999 444422111100111
Q ss_pred cchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCc
Q 004149 595 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 650 (771)
Q Consensus 595 ~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~ 650 (771)
...+++.+.+..+.+. ...+++.|+||||||.+++.++.++|++++++|+.++.
T Consensus 77 ~~~~~~~~~~~~~~~~--l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (291)
T 3qyj_A 77 YSKRVMAQDQVEVMSK--LGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIA 130 (291)
T ss_dssp GSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred cCHHHHHHHHHHHHHH--cCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCC
Confidence 2344444444334433 23468999999999999999999999999999988753
No 237
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=99.52 E-value=1.3e-13 Score=143.36 Aligned_cols=104 Identities=23% Similarity=0.450 Sum_probs=72.6
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCCCc-cccchhhHHHHHHHHHHcCCCC
Q 004149 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKV-GSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~-~G~~V~~~d~rG~~~~g~~~~~~~~~~~-~~~~~~D~~~~i~~l~~~~~~d 614 (771)
.|+||++||++.+ ...|...+..|++ .+|.|+++|+|| +|.+.... ...+ ....++|+.+.++.+... +
T Consensus 38 ~p~lvllHG~~~~--~~~w~~~~~~L~~~~~~~via~Dl~G---hG~S~~~~-~~~~~~~~~a~dl~~~l~~l~~~--~- 108 (316)
T 3c5v_A 38 GPVLLLLHGGGHS--ALSWAVFTAAIISRVQCRIVALDLRS---HGETKVKN-PEDLSAETMAKDVGNVVEAMYGD--L- 108 (316)
T ss_dssp SCEEEEECCTTCC--GGGGHHHHHHHHTTBCCEEEEECCTT---STTCBCSC-TTCCCHHHHHHHHHHHHHHHHTT--C-
T ss_pred CcEEEEECCCCcc--cccHHHHHHHHhhcCCeEEEEecCCC---CCCCCCCC-ccccCHHHHHHHHHHHHHHHhcc--C-
Confidence 4789999997654 4568888888876 389999999999 44442111 0111 112255666666665321 1
Q ss_pred CCeEEEEEcChhHHHHHHHHHh--CCCceeEEEecCCc
Q 004149 615 PSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPL 650 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~p~ 650 (771)
.+++.|+||||||.+++.+|.+ +|+ ++++|+.++.
T Consensus 109 ~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~ 145 (316)
T 3c5v_A 109 PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVV 145 (316)
T ss_dssp CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCC
T ss_pred CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEccc
Confidence 2689999999999999999985 576 8999988764
No 238
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.52 E-value=2.6e-12 Score=135.45 Aligned_cols=275 Identities=12% Similarity=0.065 Sum_probs=147.0
Q ss_pred EEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEec---CCccccc
Q 004149 73 FMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHV---PQTVHGS 148 (771)
Q Consensus 73 ~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~g~ 148 (771)
.++++.++...+...+++... .......++|||||+ |+++.... +...++.+. .++..+.+... ....
T Consensus 17 ~i~v~~~d~~tg~~~~~~~~~---~~~~p~~~a~spdg~-l~~~~~~~-~~~~v~~~~~~~g~~~~~~~~~~~~~~p--- 88 (347)
T 3hfq_A 17 GIYQGTLDTTAKTLTNDGLLA---ATQNPTYLALSAKDC-LYSVDKED-DEGGIAAWQIDGQTAHKLNTVVAPGTPP--- 88 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEE---ECSCCCCEEECTTCE-EEEEEEET-TEEEEEEEEEETTEEEEEEEEEEESCCC---
T ss_pred CEEEEEEcCCCCeEEEeeeee---ccCCcceEEEccCCe-EEEEEecC-CCceEEEEEecCCcEEEeeeeecCCCCC---
Confidence 445555544444433322111 113456789999999 66655432 233455444 45554444432 1222
Q ss_pred ccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEcc-C
Q 004149 149 VYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ-S 227 (771)
Q Consensus 149 ~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~-~ 227 (771)
..++|||||++|++.... ...+.+|++. +
T Consensus 89 -------~~~a~spdg~~l~~~~~~-------------------------------------------~~~v~v~~~~~~ 118 (347)
T 3hfq_A 89 -------AYVAVDEARQLVYSANYH-------------------------------------------KGTAEVMKIAAD 118 (347)
T ss_dssp -------SEEEEETTTTEEEEEETT-------------------------------------------TTEEEEEEECTT
T ss_pred -------EEEEECCCCCEEEEEeCC-------------------------------------------CCEEEEEEeCCC
Confidence 488999999988876432 2467777774 4
Q ss_pred CceeeccC--CC--------CCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhh
Q 004149 228 GEVQAVKG--IP--------KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 297 (771)
Q Consensus 228 ~~~~~l~~--~~--------~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 297 (771)
+..+.+.. .. ....+..++|+|||+ +++... ....|+++++.
T Consensus 119 g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-----l~v~~~--------------~~~~v~~~~~~--------- 170 (347)
T 3hfq_A 119 GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-----LAVIDL--------------GSDKVYVYNVS--------- 170 (347)
T ss_dssp SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-----EEEEET--------------TTTEEEEEEEC---------
T ss_pred CCeeecceeecCCCCCCccccCCCceEEEECCCCc-----EEEEeC--------------CCCEEEEEEEC---------
Confidence 44433310 11 111355689999998 444431 22368888872
Q ss_pred hhhcCCCCCCcceec---CC-CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCC--CCCCCCccceeeE
Q 004149 298 ELKESSSEDLPVVNL---TE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT--NGNFSSLEKIVDV 371 (771)
Q Consensus 298 ~~~~~~~~~~~~~~l---t~-~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~--~~~~~~~~~~~~~ 371 (771)
.+++...+ .. .......++|||||++|++..... ..+.++++.. +....+
T Consensus 171 -------~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~----------~~v~v~~~~~~~g~~~~~------- 226 (347)
T 3hfq_A 171 -------DAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS----------SQIASLKYDTQTGAFTQL------- 226 (347)
T ss_dssp -------TTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT----------TEEEEEEEETTTTEEEEE-------
T ss_pred -------CCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC----------CEEEEEEecCCCCceEEe-------
Confidence 24443322 11 122355689999999887766442 3466666553 332111
Q ss_pred EecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEe---cCCCCCceeeEEeecCCEEE
Q 004149 372 IPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI---TPAESNFSWSLLTLDGDNII 448 (771)
Q Consensus 372 ~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l---~~~~~~~~~~~~s~d~~~l~ 448 (771)
..+... ...+.+. .....++|+|||++|+++....+...+|.++. +|+.+.+ ...........|++||++|+
T Consensus 227 -~~~~~~-~~~~~~~--~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~spdg~~l~ 301 (347)
T 3hfq_A 227 -GIVKTI-PADYTAH--NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA-DGHLTLIQQISTEGDFPRDFDLDPTEAFVV 301 (347)
T ss_dssp -EEEESS-CTTCCSC--CEEEEEEECTTSCEEEEEEETTTEEEEEEECG-GGCEEEEEEEECSSSCCCEEEECTTSSEEE
T ss_pred -eeeeec-CCCCCCC--CcceeEEECCCCCEEEEEeCCCCEEEEEEECC-CCcEEEeEEEecCCCCcCeEEECCCCCEEE
Confidence 000000 0011100 01345789999998888776666666666653 3444433 22222345578999999887
Q ss_pred EEEeCCCCCCeEEEEEe
Q 004149 449 AVSSSPVDVPQVKYGYF 465 (771)
Q Consensus 449 ~~~s~~~~p~~l~~~~~ 465 (771)
+...... .+.++++
T Consensus 302 v~~~~~~---~v~v~~~ 315 (347)
T 3hfq_A 302 VVNQNTD---NATLYAR 315 (347)
T ss_dssp EEETTTT---EEEEEEE
T ss_pred EEEcCCC---cEEEEEE
Confidence 7665332 3555443
No 239
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=99.52 E-value=1e-13 Score=147.71 Aligned_cols=121 Identities=16% Similarity=0.202 Sum_probs=92.0
Q ss_pred CCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHC---------CcEEEEECCCCCCCCChhhhh
Q 004149 516 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV---------GYSLLIVNYRGSLGFGEEALQ 586 (771)
Q Consensus 516 ~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~---------G~~V~~~d~rG~~~~g~~~~~ 586 (771)
-+|..++...+.+. .+..|.||++||.+++ ...|...+..|++. ||.|+++|+|| +|.+...
T Consensus 75 i~g~~i~~~~~~~~----~~~~~plll~HG~~~s--~~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G---~G~S~~~ 145 (388)
T 4i19_A 75 IDGATIHFLHVRSP----EPDATPMVITHGWPGT--PVEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPG---FGLSGPL 145 (388)
T ss_dssp ETTEEEEEEEECCS----STTCEEEEEECCTTCC--GGGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTT---SGGGCCC
T ss_pred ECCeEEEEEEccCC----CCCCCeEEEECCCCCC--HHHHHHHHHHHhCcccccCCCCCCeEEEEEcCCC---CCCCCCC
Confidence 36888987777654 2345789999998766 45688888888776 99999999999 5554321
Q ss_pred cCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCcc
Q 004149 587 SLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 587 ~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 651 (771)
.. .....+++.+.+..+.+. ++.++++++||||||.+++.++.++|++++++++.+|..
T Consensus 146 ~~----~~~~~~~~a~~~~~l~~~--lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 204 (388)
T 4i19_A 146 KS----AGWELGRIAMAWSKLMAS--LGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQT 204 (388)
T ss_dssp SS----CCCCHHHHHHHHHHHHHH--TTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCC
T ss_pred CC----CCCCHHHHHHHHHHHHHH--cCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCC
Confidence 11 123466777766666665 344689999999999999999999999999999998643
No 240
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.51 E-value=1.2e-12 Score=152.36 Aligned_cols=262 Identities=10% Similarity=0.023 Sum_probs=160.7
Q ss_pred EEecCC-CCcceEEEEEeechhhcccceeEEEEEEeecC-CCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCC
Q 004149 45 TFNSGN-GNGTQAMFSISQPNLLANKRKKFMLSTVISKE-NENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENE 122 (771)
Q Consensus 45 ~~~~~s-~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~ 122 (771)
..+.+| |||++|+|+.+.. +.....||++++.++ ..-...++ .....++|||||+.|+|++....+
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~----G~~~~~l~v~dl~~g~~~l~~~~~--------~~~~~~~WspDg~~l~y~~~d~~~ 244 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMS----GNEVYTIEFKRISDPSQTIADKVS--------GTNGEIVWGPDHTSLFYVTKDETL 244 (751)
T ss_dssp EEEEECTTTTCEEEEEEESS----SSSCEEEEEEETTCTTCCCCCCEE--------EECSCCEECSSTTEEEEEEECTTC
T ss_pred eeeEecCCCCCEEEEEEeCC----CCceEEEEEEECCCCCEeCCcccc--------CceeeEEEecCCCEEEEEEECCCC
Confidence 356678 9999999998753 233467999887443 21011111 123568999999999999875433
Q ss_pred C-CeEEEEec-CCcc--eEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCC
Q 004149 123 S-PIQFELWS-QSQL--EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSW 198 (771)
Q Consensus 123 ~-~~~~~~~~-~~~~--~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (771)
. .++|.... +++. +.+...... ..+.++.|||||++|+|.+...
T Consensus 245 ~~~~v~~~~lgt~~~~~~lv~~~~~~--------~~~~~~~~SpDg~~l~~~~~~~------------------------ 292 (751)
T 2xe4_A 245 RENKVWRHVMGKLQSEDVCLYEEHNP--------LFSAFMYKAADTNTLCIGSQSP------------------------ 292 (751)
T ss_dssp CEEEEEEEETTSCGGGCEEEEECCCT--------TCEEEEEECTTSSEEEEEEECS------------------------
T ss_pred CCCEEEEEECCCCchhcEEEEecCCC--------ceEEEEEECCCCCEEEEEecCC------------------------
Confidence 3 36777773 3332 223322111 1124789999999999986432
Q ss_pred CCcccccCCcCcccCCccCceEEEEEccCC--ce--eeccCCCCCCccceEEEecC---CCCCccEEEEEeecCcceeee
Q 004149 199 KGQGDWEEDWGETYAGKRQPSLFVININSG--EV--QAVKGIPKSLSVGQVVWAPL---NEGLHQYLVFVGWSSETRKLG 271 (771)
Q Consensus 199 ~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~--~~--~~l~~~~~~~~~~~~~wspD---g~~~~~~l~~~~~~~~~~~~g 271 (771)
....||++|++++ +. +.+ ++.. ..+.|+|| |+. |+|.++..+
T Consensus 293 -----------------~~~~l~~~d~~~~~~~~~~~~l--~~~~---~~~~~s~~~~~g~~----l~~~t~~~~----- 341 (751)
T 2xe4_A 293 -----------------ETAEVHLLDLRKGNAHNTLEIV--RPRE---KGVRYDVQMHGTSH----LVILTNEGG----- 341 (751)
T ss_dssp -----------------SCEEEEEEESSSCTTCCCEEES--SCCC---TTCCEEEEEETTTE----EEEEECTTT-----
T ss_pred -----------------CCceEEEEECCCCCCCceeEEe--ecCC---CCceEEEeeeeCCE----EEEEeCCCC-----
Confidence 2378999999886 45 666 3432 23456666 888 999986541
Q ss_pred eeeeccCCceeEEEecccccchhhhhhhhcCCCCC-Cccee-cCCCCccccceeecCCCCEEEEEecCCCCCCCCccccc
Q 004149 272 IKYCYNRPCALYAVRVSLYKSEASELELKESSSED-LPVVN-LTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATD 349 (771)
Q Consensus 272 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~-lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~ 349 (771)
..+.+||.+++ ++ +..+. |........-..|++++++|+|....+ +..
T Consensus 342 -----a~~~~L~~~d~-----------------~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~--------g~~ 391 (751)
T 2xe4_A 342 -----AVNHKLLIAPR-----------------GQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRA--------GLT 391 (751)
T ss_dssp -----CTTCEEEEEET-----------------TSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEET--------TEE
T ss_pred -----CCCcEEEEEcC-----------------CCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeC--------CEE
Confidence 12348999997 43 34344 433333223345677789999988775 257
Q ss_pred cceeeec-------CCCC-CCCCccceeeEEecccccCCCCCcccccCCCCCCcc----ccCCCEEEEEeeeCC-eeEEE
Q 004149 350 SLHRIDW-------PTNG-NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPW----LSDGCTMLLSSIWGS-SQVII 416 (771)
Q Consensus 350 ~l~~~d~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~----s~dg~~l~~~~~~~~-~~~l~ 416 (771)
+|+++++ .+++ .+.++.... . ....+.+ +.|++.|+++.+... ...+|
T Consensus 392 ~l~~~dl~~~~~~~~~g~~~~~l~l~~~-----------~--------~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~ 452 (751)
T 2xe4_A 392 RIWTMMADSQDGVFKAGTGLREVVMEEP-----------I--------FTVHLVESQMLEYEEPTFRMEYSSLATPNTWF 452 (751)
T ss_dssp EEEEEECCTTTSCCCTTTCCEECCCCCS-----------S--------CEEEECGGGCCCTTCSCEEEEEEETTEEEEEE
T ss_pred EEEEEecccccccccCCccceEECCCCc-----------e--------eEEEeccCcccCCCCCEEEEEEeCCCCCCEEE
Confidence 8999996 4443 333211100 0 0011222 557777777766443 45799
Q ss_pred EEECCCCcEEEecC
Q 004149 417 SVNVSSGELLRITP 430 (771)
Q Consensus 417 ~~d~~tg~~~~l~~ 430 (771)
.+|+.+++.+.++.
T Consensus 453 ~~d~~~~~~~~l~~ 466 (751)
T 2xe4_A 453 DVSPQDHSRTAVKV 466 (751)
T ss_dssp EECTTTCCEEEEEE
T ss_pred EEECCCCcEEEEec
Confidence 99999999888764
No 241
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=99.51 E-value=4.5e-15 Score=162.55 Aligned_cols=228 Identities=15% Similarity=0.141 Sum_probs=140.6
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCC-cchHHHHHHHHCC-cEEEEECCC-CCCCCChhhhhcCCCC
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLAFLSSVG-YSLLIVNYR-GSLGFGEEALQSLPGK 591 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~-~~~~~~~~la~~G-~~V~~~d~r-G~~~~g~~~~~~~~~~ 591 (771)
+.|++ ...+|.|+. ..++.|+||++|||++..... .+......|+++| ++|+.+||| |..+++...... ...
T Consensus 79 ~edcL--~l~v~~P~~--~~~~~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~-~~~ 153 (489)
T 1qe3_A 79 SEDCL--YVNVFAPDT--PSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFD-EAY 153 (489)
T ss_dssp CSCCC--EEEEEEECS--SCCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTC-TTS
T ss_pred CCCCC--EEEEEeCCC--CCCCCCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCcccccCcccccc-ccC
Confidence 34454 445778874 234589999999988654332 2222345666665 999999999 332343221100 012
Q ss_pred ccccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHHhC--CCceeEEEecCCccchhhhhcCCCCCcch
Q 004149 592 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCNLALMVGTTDIPDWC 666 (771)
Q Consensus 592 ~~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~p~~~~~~~~~~~~~~~~~ 666 (771)
.+...+.|+.++++|+.++. ..|++||+|+|+|+||++++.++... +++|+++|+.+|..++......... ...
T Consensus 154 ~~n~gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~~-~~~ 232 (489)
T 1qe3_A 154 SDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQAAST-AAA 232 (489)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHHHHHH-HHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHHHHHH-HHH
Confidence 23344789999999998752 36899999999999999998887653 5789999999997632211100000 001
Q ss_pred hhhhccCC--CCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCC
Q 004149 667 YVESYGSK--GKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 744 (771)
Q Consensus 667 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~ 744 (771)
+...+++. ....+...+. + +.+...+++........|.+++++..|..+.+++..++++..+..++++.+-..++
T Consensus 233 ~~~~~g~~~~~~~~Lr~~~~-~--~l~~~~~~~~~~~~~~~~~~~~~p~~D~~~~~~~~~~~~~~~~~~~vp~~~g~~~~ 309 (489)
T 1qe3_A 233 FLQVLGINESQLDRLHTVAA-E--DLLKAADQLRIAEKENIFQLFFQPALDPKTLPEEPEKSIAEGAASGIPLLIGTTRD 309 (489)
T ss_dssp HHHHHTCCTTCGGGGGTSCH-H--HHHHHHHHHHTSTTCCTTSCSSCCBCBTTTBCSCHHHHHHTTTTTTCCEEEEEETT
T ss_pred HHHHcCCCHHHHHHHHcCCH-H--HHHHHHHHhhhccccccCCccceEeECCeecCcCHHHHHhcCCCCCCCEEEeeecc
Confidence 11222221 1111111111 1 11111112211112345678889999999999999999888888899999999999
Q ss_pred CCccCCC
Q 004149 745 DVHGIER 751 (771)
Q Consensus 745 ~~H~~~~ 751 (771)
++|.+..
T Consensus 310 Eg~~~~~ 316 (489)
T 1qe3_A 310 EGYLFFT 316 (489)
T ss_dssp GGGGTCC
T ss_pred hhHhhcc
Confidence 9998764
No 242
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.50 E-value=4.9e-13 Score=136.44 Aligned_cols=235 Identities=13% Similarity=0.167 Sum_probs=164.3
Q ss_pred eCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCC
Q 004149 106 PSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLG 184 (771)
Q Consensus 106 ~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~ 184 (771)
++++|++|+|.... +...+|.+. +++..++++... .--+++||++|+|......+...
T Consensus 21 ~~~~g~~iy~~n~~--d~~~ly~~~~dg~~~~~l~~~~--------------~~~i~~~g~~Iyy~~~~~~~~~~----- 79 (302)
T 3s25_A 21 FCESDGEVFFSNTN--DNGRLYAMNIDGSNIHKLSNDT--------------AMYINADKNYVYYVRNNNQKITS----- 79 (302)
T ss_dssp EEEETTEEEEEEGG--GTTEEEEEETTSCSCEEEEEEE--------------EEEEEECSSEEEEEEECC----------
T ss_pred EEEeCCEEEEEeCC--CCceEEEEcCCCCCCEEccCCc--------------eeeEEEcCCEEEEEECCCCcccc-----
Confidence 46799999887653 346799999 666777776532 33478999999999765421100
Q ss_pred CCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeec
Q 004149 185 STKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWS 264 (771)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~ 264 (771)
..+....+..||.+++++++.+.| .... ...|+|+|++ |+|+...
T Consensus 80 -------------------------~~~~~~n~~~Iy~i~~dg~~~~~l--~~~~----~~~~s~~g~~----Iy~~~~~ 124 (302)
T 3s25_A 80 -------------------------QTFFSYDRNSLCRIKRNGHGSTVL--DPDP----CIYASLIGNY----IYYLHYD 124 (302)
T ss_dssp --------------------------CCSSCCSEEEEEEETTSCCCEEE--ECSC----EEEEEEETTE----EEEEEES
T ss_pred -------------------------cceeccCCCeEEEEeCCCCcceEe--ecCC----ccEEEEeCCE----EEEEeec
Confidence 000011357899999999998888 3322 2379999999 9998621
Q ss_pred CcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCC
Q 004149 265 SETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGA 344 (771)
Q Consensus 265 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~ 344 (771)
. .....||++++ ++...++|+.+.. +.|+|+|++|+|.+..
T Consensus 125 ~-----------~~~~~Iy~~~~-----------------dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g------- 165 (302)
T 3s25_A 125 T-----------QTATSLYRIRI-----------------DGEEKKKIKNHYL----FTCNTSDRYFYYNNPK------- 165 (302)
T ss_dssp S-----------SSCEEEEEEET-----------------TSCCCEEEESSCC----CCSEEETTEEEEECTT-------
T ss_pred C-----------CCCceEEEEEC-----------------CCCCeEEEeCCCc----eEeeEECCEEEEEeCC-------
Confidence 1 12348999999 7777888887643 5679999999999862
Q ss_pred ccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc
Q 004149 345 HSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 424 (771)
Q Consensus 345 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~ 424 (771)
..+|+++++.++..+.+..+. .. .+++|+++.|+++....+ .+|++++++++.
T Consensus 166 ---~~~Iy~~~l~g~~~~~l~~~~----------------------~~-~~~~P~g~~iy~t~~~~~-~~I~~~~ldG~~ 218 (302)
T 3s25_A 166 ---NGQLYRYDTASQSEALFYDCN----------------------CY-KPVVLDDTNVYYMDVNRD-NAIVHVNINNPN 218 (302)
T ss_dssp ---TCCEEEEETTTTEEEEEECSC----------------------EE-EEEEEETTEEEEEEGGGT-TEEEEECSSSCC
T ss_pred ---CceEEEEECCCCCEEEEeCCC----------------------cc-ceeeecCCEEEEEEcCCC-cEEEEEECCCCC
Confidence 357999999876654332211 01 135699999998765433 789999999999
Q ss_pred EEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 425 LLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 425 ~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
.+.|+.... +.+++++++|+++..... ..|+++++...
T Consensus 219 ~~~Lt~~~~----~~~~~~g~~Iy~~~~~~~--~~i~~~~~DG~ 256 (302)
T 3s25_A 219 PVVLTEANI----EHYNVYGSLIFYQRGGDN--PALCVVKNDGT 256 (302)
T ss_dssp CEECSCSCE----EEEEEETTEEEEEECSSS--CEEEEEETTSC
T ss_pred eEEEeCCCc----ceEEECCCEEEEEECCCC--cEEEEEECCCC
Confidence 888875432 569999999988765433 78999887643
No 243
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.49 E-value=2e-13 Score=144.70 Aligned_cols=284 Identities=10% Similarity=0.038 Sum_probs=165.1
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCC-CeEEEEec--CCcc-----eEEEecCCcccccccCCCcccceeecCCCCeEEEE
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENES-PIQFELWS--QSQL-----EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYV 170 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~-~~~~~~~~--~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~ 170 (771)
..+..++|||||++||-.+.....- .....+|+ .+.. ........ .+.+++|+||++.|+ .
T Consensus 43 ~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~----------~V~~~~~s~d~~~l~-~ 111 (357)
T 4g56_B 43 VQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEA----------GVTDVAWVSEKGILV-A 111 (357)
T ss_dssp SEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSS----------CEEEEEEETTTEEEE-E
T ss_pred CCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCC----------CEEEEEEcCCCCEEE-E
Confidence 4588999999999999876532100 11233342 1111 01111111 236899999997554 4
Q ss_pred ecCCCCCCCCccCCCCCCCCC----CccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEE
Q 004149 171 AEEPSPSKPTFSLGSTKGGSS----DKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVV 246 (771)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~ 246 (771)
+.+... ..|+......... ...+......+.|++|....+++.....|.+||+.+++..... ......+..++
T Consensus 112 s~dg~v--~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~-~~h~~~v~~v~ 188 (357)
T 4g56_B 112 SDSGAV--ELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSY-NAHSSEVNCVA 188 (357)
T ss_dssp ETTSCE--EEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEE
T ss_pred ECCCEE--EEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE-cCCCCCEEEEE
Confidence 544432 2444322221111 1123344456678998766777777889999999998765541 23345678899
Q ss_pred EecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eec--CCCCcccccee
Q 004149 247 WAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNL--TESISSAFFPR 323 (771)
Q Consensus 247 wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~l--t~~~~~~~~p~ 323 (771)
|+|+++. ++.++. .+..|.++|+ .+++. ..+ ......+....
T Consensus 189 ~s~~~~~----~~~s~~--------------~dg~v~~wd~-----------------~~~~~~~~~~~~~~~~~v~~v~ 233 (357)
T 4g56_B 189 ACPGKDT----IFLSCG--------------EDGRILLWDT-----------------RKPKPATRIDFCASDTIPTSVT 233 (357)
T ss_dssp ECTTCSS----CEEEEE--------------TTSCEEECCT-----------------TSSSCBCBCCCTTCCSCEEEEE
T ss_pred EccCCCc----eeeeec--------------cCCceEEEEC-----------------CCCceeeeeeeccccccccchh
Confidence 9999986 555442 2336888887 44443 222 23344578899
Q ss_pred ecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEE
Q 004149 324 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTM 403 (771)
Q Consensus 324 ~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l 403 (771)
|+|++..++.....+ ..|.+||+.+++....... +...+..++|+||++.+
T Consensus 234 ~sp~~~~~la~g~~d----------~~i~~wd~~~~~~~~~~~~-------------------~~~~v~~l~~sp~~~~~ 284 (357)
T 4g56_B 234 WHPEKDDTFACGDET----------GNVSLVNIKNPDSAQTSAV-------------------HSQNITGLAYSYHSSPF 284 (357)
T ss_dssp ECTTSTTEEEEEESS----------SCEEEEESSCGGGCEEECC-------------------CSSCEEEEEECSSSSCC
T ss_pred hhhcccceEEEeecc----------cceeEEECCCCcEeEEEec-------------------cceeEEEEEEcCCCCCE
Confidence 999976554443332 3588999877654221111 01124567899999877
Q ss_pred EEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEee-cCCEEEEEEeCCCCCCeEEEEEec
Q 004149 404 LLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTL-DGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 404 ~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~-d~~~l~~~~s~~~~p~~l~~~~~~ 466 (771)
+++...++...|| |+.++++.+.......+....|+| |++.|+.... + ..|.+-++.
T Consensus 285 lasgs~D~~i~iw--d~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~--D--g~v~iW~~~ 342 (357)
T 4g56_B 285 LASISEDCTVAVL--DADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGW--D--HKVLHHHLP 342 (357)
T ss_dssp EEEEETTSCEEEE--CTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEET--T--SCEEEEECC
T ss_pred EEEEeCCCEEEEE--ECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcC--C--CeEEEEECC
Confidence 7777766665555 888888877765555566678888 6665543332 2 235555553
No 244
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.49 E-value=1.4e-12 Score=135.90 Aligned_cols=269 Identities=12% Similarity=0.080 Sum_probs=165.0
Q ss_pred ccceEEEeCCC----CCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEec
Q 004149 99 TGASAVVPSPS----GSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAE 172 (771)
Q Consensus 99 ~~~~~~~~SPd----G~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~ 172 (771)
..+...+|+|+ ++.|+..+..+ .+.+|+ .+.......+. +..+. +.++.|+|+++.|+..+.
T Consensus 33 ~~V~~v~~~~~~~~~~~~l~tgs~D~-----~v~vW~~~~~~~~~~~~l~-gh~~~------v~~~~~~~~~~~l~s~s~ 100 (321)
T 3ow8_A 33 DAIWSVAWGTNKKENSETVVTGSLDD-----LVKVWKWRDERLDLQWSLE-GHQLG------VVSVDISHTLPIAASSSL 100 (321)
T ss_dssp SCEEEEEEC-------CEEEEEETTS-----CEEEEEEETTEEEEEEEEC-CCSSC------EEEEEECSSSSEEEEEET
T ss_pred CcEEEEEEecCCCCCCCEEEEEcCCC-----CEEEEECCCCCeeeeeeec-cCCCC------EEEEEECCCCCEEEEEeC
Confidence 45889999986 45666554432 445552 22222222221 11112 268999999998888776
Q ss_pred CCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCC
Q 004149 173 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 252 (771)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~ 252 (771)
+...+ .|+.....................|+++....+++.....+.+||+.+++..... ......+..++|+|||+
T Consensus 101 D~~i~--lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~-~~~~~~v~~~~~spdg~ 177 (321)
T 3ow8_A 101 DAHIR--LWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSL-DTRGKFILSIAYSPDGK 177 (321)
T ss_dssp TSEEE--EEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEE-ECSSSCEEEEEECTTSS
T ss_pred CCcEE--EEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEe-cCCCceEEEEEECCCCC
Confidence 65432 3332222111111122233345678888766677777889999999988765431 23334577899999999
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEE
Q 004149 253 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFL 331 (771)
Q Consensus 253 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l 331 (771)
. |+..+ .+..|.++|+ .+++ ...+..+...+....|||||+.|
T Consensus 178 ~----lasg~---------------~dg~i~iwd~-----------------~~~~~~~~~~~h~~~v~~l~~spd~~~l 221 (321)
T 3ow8_A 178 Y----LASGA---------------IDGIINIFDI-----------------ATGKLLHTLEGHAMPIRSLTFSPDSQLL 221 (321)
T ss_dssp E----EEEEE---------------TTSCEEEEET-----------------TTTEEEEEECCCSSCCCEEEECTTSCEE
T ss_pred E----EEEEc---------------CCCeEEEEEC-----------------CCCcEEEEEcccCCceeEEEEcCCCCEE
Confidence 7 77765 2347888898 5554 45566667778999999999998
Q ss_pred EEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCC
Q 004149 332 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 411 (771)
Q Consensus 332 ~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~ 411 (771)
+..+.+. .|.+||+.+++......+ +...+..++|+|||+.| ++...++
T Consensus 222 ~s~s~dg-----------~i~iwd~~~~~~~~~~~~-------------------h~~~v~~~~~sp~~~~l-~s~s~D~ 270 (321)
T 3ow8_A 222 VTASDDG-----------YIKIYDVQHANLAGTLSG-------------------HASWVLNVAFCPDDTHF-VSSSSDK 270 (321)
T ss_dssp EEECTTS-----------CEEEEETTTCCEEEEECC-------------------CSSCEEEEEECTTSSEE-EEEETTS
T ss_pred EEEcCCC-----------eEEEEECCCcceeEEEcC-------------------CCCceEEEEECCCCCEE-EEEeCCC
Confidence 8776553 488899876543211000 01124567899999865 4555566
Q ss_pred eeEEEEEECCCCcEEEe-cCCCCCceeeEEeecCCEEEEEE
Q 004149 412 SQVIISVNVSSGELLRI-TPAESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 412 ~~~l~~~d~~tg~~~~l-~~~~~~~~~~~~s~d~~~l~~~~ 451 (771)
...|| |+.+++.... ......+....|+++++.|+...
T Consensus 271 ~v~iw--d~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 271 SVKVW--DVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVG 309 (321)
T ss_dssp CEEEE--ETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred cEEEE--eCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEe
Confidence 65555 7777765543 33344556678889988776554
No 245
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.49 E-value=1.6e-12 Score=138.08 Aligned_cols=236 Identities=15% Similarity=0.131 Sum_probs=141.5
Q ss_pred hhcccceeEEEEEEeecCCCCccceeecCC---ccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEE
Q 004149 65 LLANKRKKFMLSTVISKENENSVTFQWAPF---PVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEF 139 (771)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~---~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~ 139 (771)
+........++++++.........+....+ ......+...+|||||+++|+.+... ...+.+|+ .++.....
T Consensus 97 l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~---d~~i~iwd~~~~~~~~~~ 173 (365)
T 4h5i_A 97 ITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKV---PAIMRIIDPSDLTEKFEI 173 (365)
T ss_dssp HHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCS---SCEEEEEETTTTEEEEEE
T ss_pred EEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCC---CCEEEEeECCCCcEEEEe
Confidence 333444555666666544432222221111 11112356789999999998876432 23566773 33333333
Q ss_pred ecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCce
Q 004149 140 HVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPS 219 (771)
Q Consensus 140 ~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~ 219 (771)
..... | ..++|||||+.|+..+. ..
T Consensus 174 ~~~~~----V------~~v~fspdg~~l~s~s~---------------------------------------------~~ 198 (365)
T 4h5i_A 174 ETRGE----V------KDLHFSTDGKVVAYITG---------------------------------------------SS 198 (365)
T ss_dssp ECSSC----C------CEEEECTTSSEEEEECS---------------------------------------------SC
T ss_pred CCCCc----e------EEEEEccCCceEEeccc---------------------------------------------ee
Confidence 22222 2 68999999999988642 34
Q ss_pred EEEEEccCCceee-ccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhh
Q 004149 220 LFVININSGEVQA-VKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELE 298 (771)
Q Consensus 220 l~v~d~~~~~~~~-l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~ 298 (771)
+.+|+..+++... .........+..++|+|||+. ++..+.... ....|+.+++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~----l~~~s~d~~-----------~~~~i~~~~~----------- 252 (365)
T 4h5i_A 199 LEVISTVTGSCIARKTDFDKNWSLSKINFIADDTV----LIAASLKKG-----------KGIVLTKISI----------- 252 (365)
T ss_dssp EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEE----EEEEEESSS-----------CCEEEEEEEE-----------
T ss_pred EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCE----EEEEecCCc-----------ceeEEeeccc-----------
Confidence 5667766665432 211233446788999999998 877763322 1124666665
Q ss_pred hhcCCCCCCc-----ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEe
Q 004149 299 LKESSSEDLP-----VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIP 373 (771)
Q Consensus 299 ~~~~~~~~~~-----~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 373 (771)
.... ...+..+...+.+.+|||||+.||..+.+. .|.+||+.+++....
T Consensus 253 ------~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~-----------~V~iwd~~~~~~~~~--------- 306 (365)
T 4h5i_A 253 ------KSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN-----------SIALVKLKDLSMSKI--------- 306 (365)
T ss_dssp ------ETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS-----------CEEEEETTTTEEEEE---------
T ss_pred ------ccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC-----------EEEEEECCCCcEEEE---------
Confidence 2221 234555666788999999999999887663 488999887654211
Q ss_pred cccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEEC
Q 004149 374 VVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 420 (771)
Q Consensus 374 ~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~ 420 (771)
+.. .+...+..++|||||++| ++.+.++..+||.+..
T Consensus 307 ~~~---------gH~~~V~~v~fSpdg~~l-aS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 307 FKQ---------AHSFAITEVTISPDSTYV-ASVSAANTIHIIKLPL 343 (365)
T ss_dssp ETT---------SSSSCEEEEEECTTSCEE-EEEETTSEEEEEECCT
T ss_pred ecC---------cccCCEEEEEECCCCCEE-EEEeCCCeEEEEEcCC
Confidence 000 011235678999999855 6777888888887653
No 246
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.49 E-value=1.6e-12 Score=140.81 Aligned_cols=266 Identities=12% Similarity=0.081 Sum_probs=160.6
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
..+...+|||||++|+.....+ .+.+| ..+.....+.... + .+..+.|+|||+.|+..+.+....
T Consensus 109 ~~v~~~~~s~~~~~l~~~~~dg-----~i~i~~~~~~~~~~~~~~~---~------~v~~~~~~~~~~~l~~~~~d~~i~ 174 (425)
T 1r5m_A 109 NQVTCLAWSHDGNSIVTGVENG-----ELRLWNKTGALLNVLNFHR---A------PIVSVKWNKDGTHIISMDVENVTI 174 (425)
T ss_dssp BCEEEEEECTTSSEEEEEETTS-----CEEEEETTSCEEEEECCCC---S------CEEEEEECTTSSEEEEEETTCCEE
T ss_pred CceEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCeeeeccCCC---c------cEEEEEECCCCCEEEEEecCCeEE
Confidence 4688999999999998876543 34455 3343333332111 1 226899999999999887655322
Q ss_pred CCCccCCCCCCCCCCccCC---------------CCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCcc
Q 004149 178 KPTFSLGSTKGGSSDKDCN---------------SWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSV 242 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~ 242 (771)
.|+.............. .......|.++ +..+++.....|++||+.+++..... ......+
T Consensus 175 --iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~i~~~d~~~~~~~~~~-~~~~~~i 250 (425)
T 1r5m_A 175 --LWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD-DKFVIPGPKGAIFVYQITEKTPTGKL-IGHHGPI 250 (425)
T ss_dssp --EEETTTTEEEEEECCC---------------CCCBSCCEEEET-TEEEEECGGGCEEEEETTCSSCSEEE-CCCSSCE
T ss_pred --EEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC-CEEEEEcCCCeEEEEEcCCCceeeee-ccCCCce
Confidence 22221111100000011 11334556666 55666777889999999987654431 3344567
Q ss_pred ceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccc
Q 004149 243 GQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFF 321 (771)
Q Consensus 243 ~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~ 321 (771)
..++|+||++. |+..+ ....|+++|+ ..++ ...+..+...+..
T Consensus 251 ~~~~~~~~~~~----l~~~~---------------~d~~i~i~d~-----------------~~~~~~~~~~~~~~~i~~ 294 (425)
T 1r5m_A 251 SVLEFNDTNKL----LLSAS---------------DDGTLRIWHG-----------------GNGNSQNCFYGHSQSIVS 294 (425)
T ss_dssp EEEEEETTTTE----EEEEE---------------TTSCEEEECS-----------------SSBSCSEEECCCSSCEEE
T ss_pred EEEEECCCCCE----EEEEc---------------CCCEEEEEEC-----------------CCCccceEecCCCccEEE
Confidence 88999999997 77665 3347888887 4443 4555556677899
Q ss_pred eeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCC
Q 004149 322 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC 401 (771)
Q Consensus 322 p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~ 401 (771)
..|+||| .|+..+.+ ..|.+||+.+++.... +.. ....+..++|+||++
T Consensus 295 ~~~~~~~-~l~~~~~d-----------~~i~i~d~~~~~~~~~----------~~~---------~~~~i~~~~~s~~~~ 343 (425)
T 1r5m_A 295 ASWVGDD-KVISCSMD-----------GSVRLWSLKQNTLLAL----------SIV---------DGVPIFAGRISQDGQ 343 (425)
T ss_dssp EEEETTT-EEEEEETT-----------SEEEEEETTTTEEEEE----------EEC---------TTCCEEEEEECTTSS
T ss_pred EEECCCC-EEEEEeCC-----------CcEEEEECCCCcEeEe----------ccc---------CCccEEEEEEcCCCC
Confidence 9999999 66655543 3588999876543211 100 011245678999998
Q ss_pred EEEEEeeeCCeeEEEEEECCCCc---------------------EEEecCCCC--CceeeEEeecCCEEEEEEe
Q 004149 402 TMLLSSIWGSSQVIISVNVSSGE---------------------LLRITPAES--NFSWSLLTLDGDNIIAVSS 452 (771)
Q Consensus 402 ~l~~~~~~~~~~~l~~~d~~tg~---------------------~~~l~~~~~--~~~~~~~s~d~~~l~~~~s 452 (771)
.|+. ...++...+| ++.+++ +..+..... .+....|+++++.|+....
T Consensus 344 ~l~~-~~~dg~i~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 414 (425)
T 1r5m_A 344 KYAV-AFMDGQVNVY--DLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYS 414 (425)
T ss_dssp EEEE-EETTSCEEEE--ECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEES
T ss_pred EEEE-EECCCeEEEE--ECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEec
Confidence 6654 4445555555 555555 333433322 4566788888887765543
No 247
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.49 E-value=5.3e-13 Score=139.11 Aligned_cols=234 Identities=15% Similarity=0.118 Sum_probs=150.6
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEec-CCcccccccCCCcccceeecCCCCeEEEEecCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 175 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~ 175 (771)
..+....|+|++..++..+... .+.+|+ .++..+.+.. .... ..++|||||+.|+..+.+..
T Consensus 81 ~~v~~~~~~~~~~~l~s~s~D~-----~i~lWd~~~~~~~~~~~~~~~~~----------~~~~~spdg~~l~~g~~dg~ 145 (321)
T 3ow8_A 81 LGVVSVDISHTLPIAASSSLDA-----HIRLWDLENGKQIKSIDAGPVDA----------WTLAFSPDSQYLATGTHVGK 145 (321)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----EEEEEETTTTEEEEEEECCTTCC----------CCEEECTTSSEEEEECTTSE
T ss_pred CCEEEEEECCCCCEEEEEeCCC-----cEEEEECCCCCEEEEEeCCCccE----------EEEEECCCCCEEEEEcCCCc
Confidence 5578899999999888766544 566773 3333333322 1122 58999999999998765543
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCc
Q 004149 176 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLH 255 (771)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~ 255 (771)
.. .|......................|++|....+++.....|.+||+.+++..... ......+..++|+|||+.
T Consensus 146 v~--i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~spd~~~-- 220 (321)
T 3ow8_A 146 VN--IFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL-EGHAMPIRSLTFSPDSQL-- 220 (321)
T ss_dssp EE--EEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCCCEEEECTTSCE--
T ss_pred EE--EEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE-cccCCceeEEEEcCCCCE--
Confidence 21 2222111111111122233345678888766677777889999999988765441 234456889999999997
Q ss_pred cEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEE
Q 004149 256 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFL 334 (771)
Q Consensus 256 ~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~ 334 (771)
|+..+ .+..|.++|+ ..++ ...+..+...+...+|+|||+.|+..
T Consensus 221 --l~s~s---------------~dg~i~iwd~-----------------~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~ 266 (321)
T 3ow8_A 221 --LVTAS---------------DDGYIKIYDV-----------------QHANLAGTLSGHASWVLNVAFCPDDTHFVSS 266 (321)
T ss_dssp --EEEEC---------------TTSCEEEEET-----------------TTCCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred --EEEEc---------------CCCeEEEEEC-----------------CCcceeEEEcCCCCceEEEEECCCCCEEEEE
Confidence 76655 2346888887 4443 45666677778999999999998877
Q ss_pred ecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeE
Q 004149 335 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 414 (771)
Q Consensus 335 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 414 (771)
+.+. .|.+||+.+++....... +...+..++|+|||+.| ++...++...
T Consensus 267 s~D~-----------~v~iwd~~~~~~~~~~~~-------------------h~~~v~~v~~s~~g~~l-~s~~~d~~i~ 315 (321)
T 3ow8_A 267 SSDK-----------SVKVWDVGTRTCVHTFFD-------------------HQDQVWGVKYNGNGSKI-VSVGDDQEIH 315 (321)
T ss_dssp ETTS-----------CEEEEETTTTEEEEEECC-------------------CSSCEEEEEECTTSSEE-EEEETTCCEE
T ss_pred eCCC-----------cEEEEeCCCCEEEEEEcC-------------------CCCcEEEEEECCCCCEE-EEEeCCCeEE
Confidence 7653 488899877553211000 01134567899999866 5666677767
Q ss_pred EEE
Q 004149 415 IIS 417 (771)
Q Consensus 415 l~~ 417 (771)
||-
T Consensus 316 vwd 318 (321)
T 3ow8_A 316 IYD 318 (321)
T ss_dssp EEE
T ss_pred EEe
Confidence 764
No 248
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.48 E-value=1.2e-12 Score=148.54 Aligned_cols=264 Identities=17% Similarity=0.142 Sum_probs=166.8
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
..+...+|+|||+.|+...... .+.+| ..++..+.... ..+ .+..++|+|||+.|+..+.+...+
T Consensus 263 ~~v~~v~~~~d~~~l~~~~~d~-----~i~~w~~~~~~~~~~~~---h~~------~v~~~~~~~~~~~l~t~~~d~~i~ 328 (577)
T 2ymu_A 263 SSVNGVAFRPDGQTIASASDDK-----TVKLWNRNGQLLQTLTG---HSS------SVWGVAFSPDGQTIASASDDKTVK 328 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTSCEEEEECC---CSS------CEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCEEEEEEcCCCCEEEEEeCCC-----EEEEEeCCCcEEEEEec---CCC------CeEEEEECCCCCEEEEEeCCCeEE
Confidence 4577899999999998776543 45566 34443333221 111 125889999999999887665432
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccE
Q 004149 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 257 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~ 257 (771)
.|+... ........+........|+++....+.+.....|.+||..+.....+ ......+..++|||||+.
T Consensus 329 --~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~--~~~~~~v~~~~~s~dg~~---- 399 (577)
T 2ymu_A 329 --LWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL--TGHSSSVRGVAFSPDGQT---- 399 (577)
T ss_dssp --EEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEE--ECCSSCEEEEEECTTSSC----
T ss_pred --EEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEe--cCCCCCeEEEEECCCCCE----
Confidence 232111 00011111222223456788866666666778899999876666666 344556788999999998
Q ss_pred EEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecC
Q 004149 258 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 337 (771)
Q Consensus 258 l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~ 337 (771)
|+..+ .+..|.++|. .+.....+..+...+....||||++.|+..+.+
T Consensus 400 l~~~~---------------~d~~v~~~~~-----------------~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 447 (577)
T 2ymu_A 400 IASAS---------------DDKTVKLWNR-----------------NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDD 447 (577)
T ss_dssp EEEEE---------------TTSEEEEECT-----------------TCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEe---------------CCCEEEEEeC-----------------CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCC
Confidence 88766 2236777886 555566677777778899999999999887755
Q ss_pred CCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEE
Q 004149 338 SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 417 (771)
Q Consensus 338 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~ 417 (771)
. .|.+||..+.....+. . +...+..++|+|||+.|+ +...++...||
T Consensus 448 ~-----------~v~~w~~~~~~~~~~~-----------~---------~~~~v~~~~~spd~~~la-s~~~d~~i~iw- 494 (577)
T 2ymu_A 448 K-----------TVKLWNRNGQLLQTLT-----------G---------HSSSVRGVAFSPDGQTIA-SASDDKTVKLW- 494 (577)
T ss_dssp S-----------EEEEEETTSCEEEEEE-----------C---------CSSCEEEEEECTTSCEEE-EEETTSEEEEE-
T ss_pred C-----------EEEEEECCCCEEEEEc-----------C---------CCCCEEEEEEcCCCCEEE-EEeCCCEEEEE-
Confidence 3 4778886432111110 0 011244678999998664 55555555555
Q ss_pred EECCCCcEEEecCCCCCceeeEEeecCCEEEEEE
Q 004149 418 VNVSSGELLRITPAESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 418 ~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~ 451 (771)
|..+..++.+......+....|+||++.|+...
T Consensus 495 -~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~ 527 (577)
T 2ymu_A 495 -NRNGQLLQTLTGHSSSVRGVAFSPDGQTIASAS 527 (577)
T ss_dssp -ETTSCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred -cCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEE
Confidence 665444555655555566678999998776554
No 249
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.48 E-value=2.9e-12 Score=138.59 Aligned_cols=293 Identities=6% Similarity=0.025 Sum_probs=166.9
Q ss_pred CCCCcceEEEEEeech--hhcccceeEEEEEEeecCCCC-ccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCe
Q 004149 49 GNGNGTQAMFSISQPN--LLANKRKKFMLSTVISKENEN-SVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 125 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 125 (771)
.+|||+.+.++.+... +......+.+.+|++...... ...... ....+..++|||||++||.....+
T Consensus 20 ~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~dg----- 89 (416)
T 2pm9_A 20 WSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQ-----VDSKFNDLDWSHNNKIIAGALDNG----- 89 (416)
T ss_dssp BCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCC-----CSSCEEEEEECSSSSCEEEEESSS-----
T ss_pred eCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEe-----cCCceEEEEECCCCCeEEEEccCC-----
Confidence 3678885555432110 001123456777776443211 111111 124688999999999998876543
Q ss_pred EEEEec-CC---cceEEEecCCcccccccCCCcccceeecCC-CCeEEEEecCCCCCCCCccCCCCC------CC---CC
Q 004149 126 QFELWS-QS---QLEKEFHVPQTVHGSVYADGWFEGISWNSD-ETLIAYVAEEPSPSKPTFSLGSTK------GG---SS 191 (771)
Q Consensus 126 ~~~~~~-~~---~~~~~~~~~~~~~g~~~~~~~~~~~~wSpD-g~~la~~~~~~~~~~~~~~~~~~~------~~---~~ 191 (771)
.+.+|+ .. ....+..+. ...+ .+.++.|+|| ++.|+..+.+.... .|+..... .. ..
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~-~h~~------~v~~~~~~~~~~~~l~s~~~dg~v~--iwd~~~~~~~~~~~~~~~~~~ 160 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFS-NHSS------SVKTVKFNAKQDNVLASGGNNGEIF--IWDMNKCTESPSNYTPLTPGQ 160 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECC-CSSS------CCCEEEECSSSTTBEEEECSSSCEE--BCBTTTTSSCTTTCCCBCCCC
T ss_pred eEEEeecccccccccchhhcc-CCcc------ceEEEEEcCCCCCEEEEEcCCCeEE--EEECCCCcccccccccccccc
Confidence 344552 11 112222221 1111 2268999999 77777766554332 34322221 11 11
Q ss_pred CccCCCCCCcccccCCcC-cccCCccCceEEEEEccCCceeeccCCCC-----CCccceEEEecCCCCCccEEEEEeecC
Q 004149 192 DKDCNSWKGQGDWEEDWG-ETYAGKRQPSLFVININSGEVQAVKGIPK-----SLSVGQVVWAPLNEGLHQYLVFVGWSS 265 (771)
Q Consensus 192 ~~~~~~~~~~~~~~~d~g-~~~~~~~~~~l~v~d~~~~~~~~l~~~~~-----~~~~~~~~wspDg~~~~~~l~~~~~~~ 265 (771)
...+........|.++.+ ..+++.....|.+||+.+++......... ...+..++|+|||.. +++++...
T Consensus 161 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~l~~~~~d 236 (416)
T 2pm9_A 161 SMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNST----RVATATGS 236 (416)
T ss_dssp SCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTT----EEEEEECC
T ss_pred ccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCC----EEEEEECC
Confidence 123344455677888844 34455667889999999887655421221 456889999999976 66665221
Q ss_pred cceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC-c-ceecC-CCCccccceeecC-CCCEEEEEecCCCCC
Q 004149 266 ETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-P-VVNLT-ESISSAFFPRFSP-DGKFLVFLSAKSSVD 341 (771)
Q Consensus 266 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~-~~~lt-~~~~~~~~p~~Sp-DG~~l~f~~~~~~~~ 341 (771)
+ ....|+++|+ .++ . ...+. .+...+..+.||| ||+.|+..+.+
T Consensus 237 ~-----------~~~~i~~~d~-----------------~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d---- 284 (416)
T 2pm9_A 237 D-----------NDPSILIWDL-----------------RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD---- 284 (416)
T ss_dssp S-----------SSCCCCEEET-----------------TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS----
T ss_pred C-----------CCceEEEEeC-----------------CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCC----
Confidence 1 1126788887 332 2 34444 5666789999999 89988877654
Q ss_pred CCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECC
Q 004149 342 SGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS 421 (771)
Q Consensus 342 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~ 421 (771)
..|.+||+.+++.... +.. +...+..++|+||+..++++...++...|| ++.
T Consensus 285 -------g~v~~wd~~~~~~~~~----------~~~---------~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw--~~~ 336 (416)
T 2pm9_A 285 -------NTVLLWNPESAEQLSQ----------FPA---------RGNWCFKTKFAPEAPDLFACASFDNKIEVQ--TLQ 336 (416)
T ss_dssp -------SEEEEECSSSCCEEEE----------EEC---------SSSCCCCEEECTTCTTEEEECCSSSEEEEE--ESC
T ss_pred -------CCEEEeeCCCCcccee----------ecC---------CCCceEEEEECCCCCCEEEEEecCCcEEEE--Ecc
Confidence 2588999877653211 100 112356789999995566777666666666 444
Q ss_pred CCc
Q 004149 422 SGE 424 (771)
Q Consensus 422 tg~ 424 (771)
+++
T Consensus 337 ~~~ 339 (416)
T 2pm9_A 337 NLT 339 (416)
T ss_dssp CCC
T ss_pred CCC
Confidence 443
No 250
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.47 E-value=7.9e-13 Score=138.33 Aligned_cols=279 Identities=9% Similarity=-0.011 Sum_probs=171.8
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
+.+..++|||||+.+++....+ .+ ..+ .......+.... ..+ .+.+++|+|||+.|+..+ +...
T Consensus 10 ~~v~~~~~s~dg~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~--h~~------~v~~~~~~~~~~~l~~~~-dg~i- 74 (337)
T 1gxr_A 10 KPAYSFHVTADGQMQPVPFPPD----AL-IGPGIPRHARQINTLN--HGE------VVCAVTISNPTRHVYTGG-KGCV- 74 (337)
T ss_dssp EECCEEEECSSSCEEECCCCTT----SS-SSTTCCSEEEEEEEEC--CSS------CCCEEEECSSSSEEEEEC-BSEE-
T ss_pred CceeEEEECCCCCEEEeecCCC----cE-eccccCCccccceecc--CCC------ceEEEEEecCCcEEEEcC-CCeE-
Confidence 3477899999999998764332 11 222 222212222211 111 126999999999998876 3322
Q ss_pred CCCccCCCCCCCCCCc-----cCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeecc-CCCCCCccceEEEecCC
Q 004149 178 KPTFSLGSTKGGSSDK-----DCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPLN 251 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~-~~~~~~~~~~~~wspDg 251 (771)
..|+........... .+........|.++....+++.....|.+||+.+++..... -......+..+.|+||+
T Consensus 75 -~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 153 (337)
T 1gxr_A 75 -KVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDS 153 (337)
T ss_dssp -EEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTS
T ss_pred -EEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCC
Confidence 234332222111111 22333345678888656666677789999999988732221 02334457789999999
Q ss_pred CCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCE
Q 004149 252 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKF 330 (771)
Q Consensus 252 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~ 330 (771)
+. |+..+ ....|+++|+ .+++ ...+..+...+....|+|||+.
T Consensus 154 ~~----l~~~~---------------~dg~v~~~d~-----------------~~~~~~~~~~~~~~~i~~~~~~~~~~~ 197 (337)
T 1gxr_A 154 KV----CFSCC---------------SDGNIAVWDL-----------------HNQTLVRQFQGHTDGASCIDISNDGTK 197 (337)
T ss_dssp SE----EEEEE---------------TTSCEEEEET-----------------TTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred CE----EEEEe---------------CCCcEEEEeC-----------------CCCceeeeeecccCceEEEEECCCCCE
Confidence 87 77655 2347888998 4444 4455556677889999999999
Q ss_pred EEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeC
Q 004149 331 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG 410 (771)
Q Consensus 331 l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~ 410 (771)
|+..+.+ ..|++||+.+++..... .. ...+..++|+||++.|++.. .+
T Consensus 198 l~~~~~d-----------g~i~~~d~~~~~~~~~~----------~~----------~~~v~~~~~s~~~~~l~~~~-~~ 245 (337)
T 1gxr_A 198 LWTGGLD-----------NTVRSWDLREGRQLQQH----------DF----------TSQIFSLGYCPTGEWLAVGM-ES 245 (337)
T ss_dssp EEEEETT-----------SEEEEEETTTTEEEEEE----------EC----------SSCEEEEEECTTSSEEEEEE-TT
T ss_pred EEEEecC-----------CcEEEEECCCCceEeee----------cC----------CCceEEEEECCCCCEEEEEc-CC
Confidence 8877654 35889998775432110 00 01244678999999776543 34
Q ss_pred CeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004149 411 SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 411 ~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~ 467 (771)
+ .++.+++.+++...+......+....|+++++.|+....+ ..+.+.++.+
T Consensus 246 ~--~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~~~~~~~ 296 (337)
T 1gxr_A 246 S--NVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKD----NLLNAWRTPY 296 (337)
T ss_dssp S--CEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETT----SEEEEEETTT
T ss_pred C--cEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCC----CcEEEEECCC
Confidence 4 3666688888888777666666677899999977655532 3566666543
No 251
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.47 E-value=2.9e-12 Score=135.92 Aligned_cols=266 Identities=12% Similarity=0.042 Sum_probs=142.3
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEE
Q 004149 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 128 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 128 (771)
.+|||+.|++..... ...+.+.+++++...+...++.... .........++ ||++|++....+ +.-.+|.
T Consensus 57 ~spdg~~l~~~~~~~-----~~~~~v~~~~~~~~~g~~~~~~~~~--~~~~~p~~~~~--dg~~l~~~~~~~-~~v~~~~ 126 (361)
T 3scy_A 57 PSADGKFVYSVNEFS-----KDQAAVSAFAFDKEKGTLHLLNTQK--TMGADPCYLTT--NGKNIVTANYSG-GSITVFP 126 (361)
T ss_dssp ECTTSSEEEEEECCS-----STTCEEEEEEEETTTTEEEEEEEEE--CSSSCEEEEEE--CSSEEEEEETTT-TEEEEEE
T ss_pred ECCCCCEEEEEEccC-----CCCCcEEEEEEeCCCCcEEEeeEec--cCCCCcEEEEE--CCCEEEEEECCC-CEEEEEE
Confidence 478998877664321 1224565555655434444443221 00122334445 899886654322 3333444
Q ss_pred EecCCcceE---EEecCC-cccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccc
Q 004149 129 LWSQSQLEK---EFHVPQ-TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 204 (771)
Q Consensus 129 ~~~~~~~~~---~~~~~~-~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (771)
+...+.... ...... +.....-......++.|||||++|++....
T Consensus 127 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~------------------------------- 175 (361)
T 3scy_A 127 IGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG------------------------------- 175 (361)
T ss_dssp BCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT-------------------------------
T ss_pred eCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC-------------------------------
Confidence 433332221 111110 000000000011368999999988776321
Q ss_pred cCCcCcccCCccCceEEEEEccCCc-------e------eeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeee
Q 004149 205 EEDWGETYAGKRQPSLFVININSGE-------V------QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLG 271 (771)
Q Consensus 205 ~~d~g~~~~~~~~~~l~v~d~~~~~-------~------~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g 271 (771)
...|++|+++... . ..+. .+....+..++|||||+. |+++..
T Consensus 176 ------------~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~spdg~~----l~v~~~-------- 230 (361)
T 3scy_A 176 ------------TDQIHKFNINPNANADNKEKFLTKGTPEAFK-VAPGSGPRHLIFNSDGKF----AYLINE-------- 230 (361)
T ss_dssp ------------TTEEEEEEECTTCCTTTCCCCEEEEEEEEEE-CCTTCCEEEEEECTTSSE----EEEEET--------
T ss_pred ------------CCEEEEEEEcCCCCcccccceeeccccccee-cCCCCCCeEEEEcCCCCE----EEEEcC--------
Confidence 2466777665432 1 1111 333445678999999996 665541
Q ss_pred eeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceec------CCCCccccceeecCCCCEEEEEecCCCCCCCCc
Q 004149 272 IKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL------TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAH 345 (771)
Q Consensus 272 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l------t~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~ 345 (771)
....|+++++ .++..+.+ .........++|||||++|+......
T Consensus 231 ------~~~~v~v~~~-----------------~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~------- 280 (361)
T 3scy_A 231 ------IGGTVIAFRY-----------------ADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLK------- 280 (361)
T ss_dssp ------TTCEEEEEEE-----------------ETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSS-------
T ss_pred ------CCCeEEEEEe-----------------cCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCC-------
Confidence 2236777777 44433222 11122346889999999886655431
Q ss_pred cccccceeeecC--CCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCC
Q 004149 346 SATDSLHRIDWP--TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSG 423 (771)
Q Consensus 346 ~~~~~l~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg 423 (771)
...|.++++. ++....+ ..+.. + ..+..++|+|||++|++.....+...+|.+|..+|
T Consensus 281 --~~~i~v~~~~~~~g~~~~~--------~~~~~---g-------~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g 340 (361)
T 3scy_A 281 --ADGVAIFKVDETNGTLTKV--------GYQLT---G-------IHPRNFIITPNGKYLLVACRDTNVIQIFERDQATG 340 (361)
T ss_dssp --SCEEEEEEECTTTCCEEEE--------EEEEC---S-------SCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTC
T ss_pred --CCEEEEEEEcCCCCcEEEe--------eEecC---C-------CCCceEEECCCCCEEEEEECCCCCEEEEEEECCCC
Confidence 1346666654 4432111 00000 0 12456789999998887776678888999999999
Q ss_pred cEEEecC
Q 004149 424 ELLRITP 430 (771)
Q Consensus 424 ~~~~l~~ 430 (771)
+++.+..
T Consensus 341 ~~~~~~~ 347 (361)
T 3scy_A 341 LLTDIKK 347 (361)
T ss_dssp CEEECSC
T ss_pred cEeecce
Confidence 9887753
No 252
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=99.47 E-value=1.1e-13 Score=143.24 Aligned_cols=195 Identities=14% Similarity=0.137 Sum_probs=124.9
Q ss_pred CceEEEEEEecCCCCC-CCCCcEEEEEcCCCCCCCCCcchHHHHHHHH------CCcEEEEECCCCCCCCChhhhh----
Q 004149 518 QKPFEAIFVSSSHKKD-CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS------VGYSLLIVNYRGSLGFGEEALQ---- 586 (771)
Q Consensus 518 g~~l~~~~~~P~~~~~-~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~------~G~~V~~~d~rG~~~~g~~~~~---- 586 (771)
|.+...++|.|+++.+ .+++|+|+++||... ........+.++. .+++||++++.. ...++..
T Consensus 23 ~~~r~~~VylP~~y~~~~~~yPVlylldG~~~---f~~~~~~~~~l~~~~~~~~~~~IvV~i~~~~---R~~dytp~~~~ 96 (331)
T 3gff_A 23 KETREYVIALPEGYAQSLEAYPVVYLLDGEDQ---FDHMASLLQFLSQGTMPQIPKVIIVGIHNTN---RMRDYTPTHTL 96 (331)
T ss_dssp TEEEEEEEECCTTGGGSCCCEEEEEESSHHHH---HHHHHHHHHHHTCSSSCSSCCCEEEEECCSS---HHHHSCSSCCS
T ss_pred CCeEEEEEEeCCCCCCCCCCccEEEEecChhh---hHHHHHHHHHHHhhhhcCCCCEEEEEECCCC---cccccCCCccc
Confidence 5678899999998755 688999999999421 0111223344433 368999988621 1111100
Q ss_pred ----------cCCCCccccchhhHH--HHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchh
Q 004149 587 ----------SLPGKVGSQDVNDVL--TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA 654 (771)
Q Consensus 587 ----------~~~~~~~~~~~~D~~--~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~ 654 (771)
..+...+.....+.+ +.+.++.++..+++.| +|+||||||+++++++.++|+.|+++++.+|.+.+.
T Consensus 97 ~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~~r-~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~w~~ 175 (331)
T 3gff_A 97 VLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGIN-VLVGHSFGGLVAMEALRTDRPLFSAYLALDTSLWFD 175 (331)
T ss_dssp BCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEEEE-EEEEETHHHHHHHHHHHTTCSSCSEEEEESCCTTTT
T ss_pred cccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCCCe-EEEEECHHHHHHHHHHHhCchhhheeeEeCchhcCC
Confidence 000001111222222 4455666666566555 899999999999999999999999999999975211
Q ss_pred hhhcCCCCCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCC-------ccCcHHHHHHH
Q 004149 655 LMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDL-------RVPVSNGLQYA 727 (771)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~-------~vp~~~~~~~~ 727 (771)
. .. ........ .........|+++.+|+.|. .++...+++++
T Consensus 176 ~-------------~~-------------~~~~~~~~-----~~~~~~~~~~l~l~~G~~d~~~~~~~~~~~~~~~~~l~ 224 (331)
T 3gff_A 176 S-------------PH-------------YLTLLEER-----VVKGDFKQKQLFMAIANNPLSPGFGVSSYHKDLNLAFA 224 (331)
T ss_dssp T-------------TH-------------HHHHHHHH-----HHHCCCSSEEEEEEECCCSEETTTEECCHHHHHHHHHH
T ss_pred h-------------HH-------------HHHHHHHH-----hhcccCCCCeEEEEeCCCCCCCccchHHHHHHHHHHHH
Confidence 0 00 00001111 11111245799999999998 57778889999
Q ss_pred HHHHhC---CCCEEEEEeCCCCccCC
Q 004149 728 RALREK---GVETKVIVFPNDVHGIE 750 (771)
Q Consensus 728 ~~l~~~---g~~~~~~~~~~~~H~~~ 750 (771)
+.|++. |+++++.++|+++|+..
T Consensus 225 ~~Lk~~~~~g~~~~~~~~pg~~H~sv 250 (331)
T 3gff_A 225 DKLTKLAPKGLGFMAKYYPEETHQSV 250 (331)
T ss_dssp HHHHHHCCTTEEEEEEECTTCCTTTH
T ss_pred HHHHhccCCCceEEEEECCCCCcccc
Confidence 999986 67899999999999754
No 253
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.46 E-value=1.1e-11 Score=131.46 Aligned_cols=279 Identities=10% Similarity=0.011 Sum_probs=173.5
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEE
Q 004149 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 128 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 128 (771)
.++||+.|+... ..+.+.+|++... .....+... ...+...+|+|||++|+.....+ .+.
T Consensus 40 ~s~~~~~l~~~~---------~dg~i~vwd~~~~-~~~~~~~~h-----~~~v~~~~~~~~~~~l~s~~~dg-----~i~ 99 (369)
T 3zwl_B 40 YNKEGDLLFSCS---------KDSSASVWYSLNG-ERLGTLDGH-----TGTIWSIDVDCFTKYCVTGSADY-----SIK 99 (369)
T ss_dssp ECTTSCEEEEEE---------SSSCEEEEETTTC-CEEEEECCC-----SSCEEEEEECTTSSEEEEEETTT-----EEE
T ss_pred EcCCCCEEEEEe---------CCCEEEEEeCCCc-hhhhhhhhc-----CCcEEEEEEcCCCCEEEEEeCCC-----eEE
Confidence 366787776643 2346677666332 122222212 25688999999999998876543 455
Q ss_pred Ee--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccC
Q 004149 129 LW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE 206 (771)
Q Consensus 129 ~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (771)
+| ..++..........+ ..+.|+|||+.|+......
T Consensus 100 iwd~~~~~~~~~~~~~~~v----------~~~~~~~~~~~l~~~~~~~-------------------------------- 137 (369)
T 3zwl_B 100 LWDVSNGQCVATWKSPVPV----------KRVEFSPCGNYFLAILDNV-------------------------------- 137 (369)
T ss_dssp EEETTTCCEEEEEECSSCE----------EEEEECTTSSEEEEEECCB--------------------------------
T ss_pred EEECCCCcEEEEeecCCCe----------EEEEEccCCCEEEEecCCc--------------------------------
Confidence 56 344444444433333 6899999999998875431
Q ss_pred CcCcccCCccCceEEEEEccCCce------------eeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeee
Q 004149 207 DWGETYAGKRQPSLFVININSGEV------------QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKY 274 (771)
Q Consensus 207 d~g~~~~~~~~~~l~v~d~~~~~~------------~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~ 274 (771)
......|.+||+..+.. ..+........+..+.|+|||+. |+..+
T Consensus 138 -------~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~------------ 194 (369)
T 3zwl_B 138 -------MKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKY----IIAGH------------ 194 (369)
T ss_dssp -------TTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCE----EEEEE------------
T ss_pred -------cCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCE----EEEEc------------
Confidence 01236788888766532 11211122226778899999997 77654
Q ss_pred eccCCceeEEEecccccchhhhhhhhcCCCCC--CcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccce
Q 004149 275 CYNRPCALYAVRVSLYKSEASELELKESSSED--LPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLH 352 (771)
Q Consensus 275 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~ 352 (771)
....|+++|+ .+ .....+..+...+....|+|||+.|+..+.+ ..|.
T Consensus 195 ---~dg~i~i~d~-----------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------~~i~ 243 (369)
T 3zwl_B 195 ---KDGKISKYDV-----------------SNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRD-----------TNSF 243 (369)
T ss_dssp ---TTSEEEEEET-----------------TTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETT-----------SEEE
T ss_pred ---CCCEEEEEEC-----------------CCCcEeEEEEecCCCceeEEEECCCCCEEEEecCC-----------ceEE
Confidence 3347889997 33 3345555666778899999999999877654 2588
Q ss_pred eeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCC-----------eeEEEEEECC
Q 004149 353 RIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS-----------SQVIISVNVS 421 (771)
Q Consensus 353 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~-----------~~~l~~~d~~ 421 (771)
+||+.+++....... ...+..++|+|+++.+++....++ ...+..+|..
T Consensus 244 v~d~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 303 (369)
T 3zwl_B 244 LVDVSTLQVLKKYET--------------------DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKI 303 (369)
T ss_dssp EEETTTCCEEEEEEC--------------------SSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETT
T ss_pred EEECCCCceeeeecC--------------------CCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecC
Confidence 999887654211110 012346789999998877654331 1257777888
Q ss_pred CCcEEEecC-CCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004149 422 SGELLRITP-AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 422 tg~~~~l~~-~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~ 467 (771)
+++...... ....+....|+++++.|+....+ ..|.+.++..
T Consensus 304 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~v~iw~~~~ 346 (369)
T 3zwl_B 304 FEEEIGRVQGHFGPLNTVAISPQGTSYASGGED----GFIRLHHFEK 346 (369)
T ss_dssp TCCEEEEEECCSSCEEEEEECTTSSEEEEEETT----SEEEEEEECH
T ss_pred CCcchhheecccCcEEEEEECCCCCEEEEEcCC----CeEEEEECcc
Confidence 877655433 34455667899999877765532 3566666654
No 254
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.45 E-value=1.9e-11 Score=133.87 Aligned_cols=260 Identities=13% Similarity=0.045 Sum_probs=151.8
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEec-CCcceEEEec---CCcccccccCCCcccceeecCCCCeEEEEecCCC
Q 004149 100 GASAVVPSPSGSKLLVVRNPENESPIQFELWS-QSQLEKEFHV---PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 175 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~ 175 (771)
.+..++|||||++|+++...+ +.-.+|.+.. .+...+.+.. ...+ .+++|||||+.|+....
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~v----------~~~~~sp~~~~l~~~~~--- 169 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSD-KSLLVFDVDKTSKNVLKLRKRFCFSKRP----------NAISIAEDDTTVIIADK--- 169 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGG-TEEEEEEECSSSSSCEEEEEEEECSSCE----------EEEEECTTSSEEEEEET---
T ss_pred ceEEEEEcCCCCEEEEEECCC-CeEEEEECcCCCCceeeeeecccCCCCc----------eEEEEcCCCCEEEEEeC---
Confidence 478899999999986555433 3334444431 4444444431 2222 58999999999988632
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceee----ccCCCCCCccceEEEecC-
Q 004149 176 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQA----VKGIPKSLSVGQVVWAPL- 250 (771)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~----l~~~~~~~~~~~~~wspD- 250 (771)
...+++|++.+++... .. ......+..++|+||
T Consensus 170 -----------------------------------------~g~v~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~sp~~ 207 (450)
T 2vdu_B 170 -----------------------------------------FGDVYSIDINSIPEEKFTQEPI-LGHVSMLTDVHLIKDS 207 (450)
T ss_dssp -----------------------------------------TSEEEEEETTSCCCSSCCCCCS-EECSSCEEEEEEEECT
T ss_pred -----------------------------------------CCcEEEEecCCcccccccceee-ecccCceEEEEEcCCC
Confidence 2578999988776542 10 223346788999999
Q ss_pred --CCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-cee-cCCCCccccceeecC
Q 004149 251 --NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVN-LTESISSAFFPRFSP 326 (771)
Q Consensus 251 --g~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~-lt~~~~~~~~p~~Sp 326 (771)
++. |+..+ .+..|+++|+ .++. ... +..+...+..+.||
T Consensus 208 ~~~~~----l~s~~---------------~d~~i~vwd~-----------------~~~~~~~~~~~~h~~~v~~~~~s- 250 (450)
T 2vdu_B 208 DGHQF----IITSD---------------RDEHIKISHY-----------------PQCFIVDKWLFGHKHFVSSICCG- 250 (450)
T ss_dssp TSCEE----EEEEE---------------TTSCEEEEEE-----------------SCTTCEEEECCCCSSCEEEEEEC-
T ss_pred CCCcE----EEEEc---------------CCCcEEEEEC-----------------CCCceeeeeecCCCCceEEEEEC-
Confidence 775 66554 2347888887 4444 333 44566778999999
Q ss_pred CCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEeccccc--CCCCCc----ccccCCCCCCccccCC
Q 004149 327 DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCA--EGDCFP----GLYSSSILSNPWLSDG 400 (771)
Q Consensus 327 DG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~f~----g~~~~~~~~~~~s~dg 400 (771)
||+.|+..+.+ ..|.+||+.+++..........+..+.... ....|. ......+..+.|+||+
T Consensus 251 d~~~l~s~~~d-----------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 319 (450)
T 2vdu_B 251 KDYLLLSAGGD-----------DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL 319 (450)
T ss_dssp STTEEEEEESS-----------SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred CCCEEEEEeCC-----------CeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence 99999877754 358999998876422111000000000000 000000 0011234567899999
Q ss_pred CEEEEEeeeCCeeEEEEE-ECCCCcEE---EecCCCCCceeeEEeecCCEEEEEEeCCCCCC------eEEEEEec
Q 004149 401 CTMLLSSIWGSSQVIISV-NVSSGELL---RITPAESNFSWSLLTLDGDNIIAVSSSPVDVP------QVKYGYFV 466 (771)
Q Consensus 401 ~~l~~~~~~~~~~~l~~~-d~~tg~~~---~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~------~l~~~~~~ 466 (771)
+.|++....++...||.+ +..++++. .+... ..+....|++ +.++++..+...|. ++|.++..
T Consensus 320 ~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~--~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 320 PFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHN--DEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEET--TEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred CEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecC--CcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 988776646666677766 33333333 23333 3344455666 46777776766664 66665543
No 255
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.45 E-value=5.9e-12 Score=132.65 Aligned_cols=285 Identities=12% Similarity=0.153 Sum_probs=162.4
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004149 100 GASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
.+...+|||||+.||..+..+ .+.+| .++..........+..+. +..++|||||++|+..+.+...+
T Consensus 18 ~v~~l~~sp~g~~las~~~D~-----~i~iw~~~~~~~~~~~~~~~~h~~~------v~~~~~sp~g~~l~s~s~D~~v~ 86 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDR-----RIRIWGTEGDSWICKSVLSEGHQRT------VRKVAWSPCGNYLASASFDATTC 86 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTS-----CEEEEEEETTEEEEEEEECSSCSSC------EEEEEECTTSSEEEEEETTSCEE
T ss_pred cEEEEEECCCCCEEEEEcCCC-----eEEEEEcCCCcceeeeeeccccCCc------EEEEEECCCCCEEEEEECCCcEE
Confidence 477899999999999876543 34555 222221111111222222 36899999999999988766432
Q ss_pred CCCccCCCCC--CCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce----eeccCCCCCCccceEEEecCC
Q 004149 178 KPTFSLGSTK--GGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV----QAVKGIPKSLSVGQVVWAPLN 251 (771)
Q Consensus 178 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~----~~l~~~~~~~~~~~~~wspDg 251 (771)
.|+..... .......+......+.|+++....+++..+..|.+||+.++.. ..+ ......+..++|+|||
T Consensus 87 --iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 87 --IWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL--NSHTQDVKHVVWHPSQ 162 (345)
T ss_dssp --EEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEE--CCCCSCEEEEEECSSS
T ss_pred --EEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEe--cCcCCCeEEEEECCCC
Confidence 23321111 0111223344445677888876667777788999999987642 223 2344467889999999
Q ss_pred CCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc---ceecCCCCccccceeecCCC
Q 004149 252 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP---VVNLTESISSAFFPRFSPDG 328 (771)
Q Consensus 252 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~---~~~lt~~~~~~~~p~~SpDG 328 (771)
+. |+..+. +..|.++|+ ..+. ...+..+...+.+.+|||||
T Consensus 163 ~~----l~s~s~---------------d~~i~~w~~-----------------~~~~~~~~~~~~~h~~~v~~l~~sp~g 206 (345)
T 3fm0_A 163 EL----LASASY---------------DDTVKLYRE-----------------EEDDWVCCATLEGHESTVWSLAFDPSG 206 (345)
T ss_dssp SC----EEEEET---------------TSCEEEEEE-----------------ETTEEEEEEEECCCSSCEEEEEECTTS
T ss_pred CE----EEEEeC---------------CCcEEEEEe-----------------cCCCEEEEEEecCCCCceEEEEECCCC
Confidence 98 887762 224666665 3332 24566667778999999999
Q ss_pred CEEEEEecCCCCCCCCccccccceeeecCCCCC-CCCcc-ceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEE
Q 004149 329 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN-FSSLE-KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLS 406 (771)
Q Consensus 329 ~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~-~~~~~-~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~ 406 (771)
++|+..+.+. .|.+|+....+. ..+.. ........+. .+.+.....+..++|++++..| ++
T Consensus 207 ~~l~s~s~D~-----------~v~iW~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~h~~~v~~v~~~~~~~~l-~s 269 (345)
T 3fm0_A 207 QRLASCSDDR-----------TVRIWRQYLPGNEQGVACSGSDPSWKCIC-----TLSGFHSRTIYDIAWCQLTGAL-AT 269 (345)
T ss_dssp SEEEEEETTS-----------CEEEEEEECTTCTTCCCCC---CEEEEEE-----EECSSCSSCEEEEEECTTTCCE-EE
T ss_pred CEEEEEeCCC-----------eEEEeccccCCCCccceeeccCCccceeE-----EecCCCCCcEEEEEEecCCCEE-EE
Confidence 9998877653 366666432221 11110 0000000000 0111112235578899999865 45
Q ss_pred eeeCCeeEEEEEECCCCc----E---EEe-cCCCCCceeeEEeecCCEEEEEEe
Q 004149 407 SIWGSSQVIISVNVSSGE----L---LRI-TPAESNFSWSLLTLDGDNIIAVSS 452 (771)
Q Consensus 407 ~~~~~~~~l~~~d~~tg~----~---~~l-~~~~~~~~~~~~s~d~~~l~~~~s 452 (771)
...++...+|.++..... . ..+ ......+....|+|++..++++.+
T Consensus 270 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s 323 (345)
T 3fm0_A 270 ACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCS 323 (345)
T ss_dssp EETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEE
T ss_pred EeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcC
Confidence 556777788876543211 1 111 122234556678888764555544
No 256
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.44 E-value=4.6e-12 Score=133.20 Aligned_cols=268 Identities=12% Similarity=0.097 Sum_probs=163.8
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
+.+...+|||||++|+..+..+ .+.+|+ .+.....+..... .+..++|||||+.|+..+.+...
T Consensus 56 ~~v~~~~~s~d~~~l~s~s~Dg-----~v~iWd~~~~~~~~~~~~~~~---------~v~~~~~s~~~~~l~s~~~d~~v 121 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSASQDG-----KLIIWDSYTTNKVHAIPLRSS---------WVMTCAYAPSGNYVACGGLDNIC 121 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTT-----EEEEEETTTCCEEEEEECSSS---------CEEEEEECTTSSEEEEEETTCEE
T ss_pred CceEEEEECCCCCEEEEEeCCC-----cEEEEECCCCCcceEeecCCc---------cEEEEEECCCCCEEEEEeCCCeE
Confidence 4578899999999998776544 566773 3333322222111 12588999999999988765432
Q ss_pred CCCCccCCCCCCC----CCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCC
Q 004149 177 SKPTFSLGSTKGG----SSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 252 (771)
Q Consensus 177 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~ 252 (771)
+ .|+....... .....+........|.++ +..+++..+..|.+||+.+++..... ......+..++|+|||+
T Consensus 122 ~--iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~s~s~d~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~~~~~~ 197 (340)
T 1got_B 122 S--IYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQIVTSSGDTTCALWDIETGQQTTTF-TGHTGDVMSLSLAPDTR 197 (340)
T ss_dssp E--EEETTTCSBSCEEEEEEECCSSCEEEEEEEET-TEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSS
T ss_pred E--EEECccCCCcceeEEEecCCCccEEEEEECCC-CcEEEEECCCcEEEEECCCCcEEEEE-cCCCCceEEEEECCCCC
Confidence 2 2222111100 011112222233445555 45666677889999999988765441 33445688999999998
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEE
Q 004149 253 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFL 331 (771)
Q Consensus 253 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l 331 (771)
. |+..+ .+..|.++|+ .++. ...+..+...+....|+|||+.|
T Consensus 198 ~----l~sg~---------------~d~~v~~wd~-----------------~~~~~~~~~~~h~~~v~~v~~~p~~~~l 241 (340)
T 1got_B 198 L----FVSGA---------------CDASAKLWDV-----------------REGMCRQTFTGHESDINAICFFPNGNAF 241 (340)
T ss_dssp E----EEEEE---------------TTSCEEEEET-----------------TTCSEEEEECCCSSCEEEEEECTTSSEE
T ss_pred E----EEEEe---------------CCCcEEEEEC-----------------CCCeeEEEEcCCcCCEEEEEEcCCCCEE
Confidence 6 66554 2347888887 4444 45566677778999999999998
Q ss_pred EEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCC
Q 004149 332 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 411 (771)
Q Consensus 332 ~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~ 411 (771)
+..+.+. .|.+||+.+++.... ... ... ...+..++|+|||+.| ++...++
T Consensus 242 ~s~s~d~-----------~v~iwd~~~~~~~~~----------~~~--~~~-----~~~v~~~~~s~~g~~l-~~g~~d~ 292 (340)
T 1got_B 242 ATGSDDA-----------TCRLFDLRADQELMT----------YSH--DNI-----ICGITSVSFSKSGRLL-LAGYDDF 292 (340)
T ss_dssp EEEETTS-----------CEEEEETTTTEEEEE----------ECC--TTC-----CSCEEEEEECTTSSEE-EEEETTS
T ss_pred EEEcCCC-----------cEEEEECCCCcEEEE----------Ecc--CCc-----ccceEEEEECCCCCEE-EEECCCC
Confidence 8777553 488899876543110 000 000 0124467899999865 4445555
Q ss_pred eeEEEEEECCCCcEEE-ecCCCCCceeeEEeecCCEEEEEE
Q 004149 412 SQVIISVNVSSGELLR-ITPAESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 412 ~~~l~~~d~~tg~~~~-l~~~~~~~~~~~~s~d~~~l~~~~ 451 (771)
. +..+|+.+++... +......+....|++++..|+...
T Consensus 293 ~--i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s 331 (340)
T 1got_B 293 N--CNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGS 331 (340)
T ss_dssp E--EEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred e--EEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEc
Confidence 5 4445776766543 433344556667888888766544
No 257
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=99.43 E-value=2e-12 Score=127.79 Aligned_cols=211 Identities=13% Similarity=0.063 Sum_probs=131.4
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCc--EEEEECCCCCCC--C-Chhh---hhc-----CCCC-cc--ccchhhH
Q 004149 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGY--SLLIVNYRGSLG--F-GEEA---LQS-----LPGK-VG--SQDVNDV 600 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~--~V~~~d~rG~~~--~-g~~~---~~~-----~~~~-~~--~~~~~D~ 600 (771)
.+.||++||.+.+ ...|...+..|++.|| .|+.+|.++.+. + |... .+. ...+ .. ....+++
T Consensus 6 ~~pvvliHG~~~~--~~~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l 83 (249)
T 3fle_A 6 TTATLFLHGYGGS--ERSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWI 83 (249)
T ss_dssp CEEEEEECCTTCC--GGGTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHH
T ss_pred CCcEEEECCCCCC--hhHHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHH
Confidence 4678999996554 5578889999999996 588888775321 0 1000 000 0000 00 1125567
Q ss_pred HHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCC-----ceeEEEecCCccchhhhhcCCCCCcchhhhhccCCC
Q 004149 601 LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD-----KFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKG 675 (771)
Q Consensus 601 ~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~-----~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 675 (771)
.++++++.++. +.+++.|+||||||.+++.++.++|+ +++.+|++++..+....... .... ..+..
T Consensus 84 ~~~i~~l~~~~--~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~--~~~~---~~~~~-- 154 (249)
T 3fle_A 84 KEVLSQLKSQF--GIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNE--NVNE---IIVDK-- 154 (249)
T ss_dssp HHHHHHHHHTT--CCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSS--CTTT---SCBCT--
T ss_pred HHHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccC--Ccch---hhhcc--
Confidence 77788887764 45689999999999999999998863 68888888765543211110 0000 00000
Q ss_pred CCcCCCCCC--hhhHHHHhhcCccccccCCCCcEEEEeeC------CCCccCcHHHHHHHHHHHhCCCCEEEEEeCC--C
Q 004149 676 KDSFTESPS--VEDLTRFHSKSPISHISKVKTPTIFLLGA------QDLRVPVSNGLQYARALREKGVETKVIVFPN--D 745 (771)
Q Consensus 676 ~~~~~~~~~--~~~~~~~~~~sp~~~~~~i~~P~Lii~G~------~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~--~ 745 (771)
.+.|. ......+... ...+.+.++|+|.|+|+ .|..||...++.+...++......+.+.+.+ +
T Consensus 155 ----~g~p~~~~~~~~~l~~~--~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a 228 (249)
T 3fle_A 155 ----QGKPSRMNAAYRQLLSL--YKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKA 228 (249)
T ss_dssp ----TCCBSSCCHHHHHTGGG--HHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGG
T ss_pred ----cCCCcccCHHHHHHHHH--HhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCCCC
Confidence 01111 1122222211 23344467899999998 6999999999888777777655666667765 8
Q ss_pred CccCCCCCChHHHHHHHHHHH
Q 004149 746 VHGIERPQSDFESFLNIGLWF 766 (771)
Q Consensus 746 ~H~~~~~~~~~~~~~~i~~wl 766 (771)
.|..... + .++.+.|..||
T Consensus 229 ~Hs~l~~-n-~~V~~~I~~FL 247 (249)
T 3fle_A 229 QHSQLHE-N-KDVANEIIQFL 247 (249)
T ss_dssp STGGGGG-C-HHHHHHHHHHH
T ss_pred chhcccc-C-HHHHHHHHHHh
Confidence 8986643 3 37888888887
No 258
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.43 E-value=1.1e-11 Score=128.44 Aligned_cols=274 Identities=14% Similarity=0.150 Sum_probs=163.1
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
..+...+|||||++||.....+ .+.+| ..++..+.+.... + .+..++|+|||+.|+..+.+...
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~dg-----~i~iw~~~~~~~~~~~~~h~---~------~v~~~~~~~~~~~l~s~~~d~~i 89 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSADK-----LIKIWGAYDGKFEKTISGHK---L------GISDVAWSSDSNLLVSASDDKTL 89 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEECCCS---S------CEEEEEECTTSSEEEEEETTSEE
T ss_pred CcEEEEEECCCCCEEEEeeCCC-----eEEEEeCCCcccchhhccCC---C------ceEEEEEcCCCCEEEEECCCCEE
Confidence 4578899999999998876543 45566 2334333332211 1 12689999999999988766533
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004149 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
+ .|+............+........|.++....+++.....|.+||+.+++..... ......+..+.|+|||+.
T Consensus 90 ~--vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~--- 163 (312)
T 4ery_A 90 K--IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL-PAHSDPVSAVHFNRDGSL--- 163 (312)
T ss_dssp E--EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSE---
T ss_pred E--EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcEEEEEEcCCCCE---
Confidence 2 3332222211122223333345567787666666777889999999988754431 334456788999999996
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eecC-CCCccccceeecCCCCEEEEE
Q 004149 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLT-ESISSAFFPRFSPDGKFLVFL 334 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt-~~~~~~~~p~~SpDG~~l~f~ 334 (771)
|+..+ ....|.++|+ .+++. ..+. .....+....|+|||++|+..
T Consensus 164 -l~~~~---------------~d~~i~~wd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 210 (312)
T 4ery_A 164 -IVSSS---------------YDGLCRIWDT-----------------ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 210 (312)
T ss_dssp -EEEEE---------------TTSCEEEEET-----------------TTCCEEEEECCSSCCCEEEEEECTTSSEEEEE
T ss_pred -EEEEe---------------CCCcEEEEEC-----------------CCCceeeEEeccCCCceEEEEECCCCCEEEEE
Confidence 76655 2347888887 44443 3333 333457778999999998877
Q ss_pred ecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccc-cCCCEEEEEeeeCCee
Q 004149 335 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL-SDGCTMLLSSIWGSSQ 413 (771)
Q Consensus 335 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s-~dg~~l~~~~~~~~~~ 413 (771)
+.+ ..|.+||+.+++.... +....... ......|+ ++++ ++++...++..
T Consensus 211 ~~d-----------~~i~iwd~~~~~~~~~----------~~~~~~~~-------~~~~~~~~~~~~~-~l~sg~~dg~i 261 (312)
T 4ery_A 211 TLD-----------NTLKLWDYSKGKCLKT----------YTGHKNEK-------YCIFANFSVTGGK-WIVSGSEDNLV 261 (312)
T ss_dssp ETT-----------TEEEEEETTTTEEEEE----------ECSSCCSS-------SCCCEEEECSSSC-EEEECCTTSCE
T ss_pred cCC-----------CeEEEEECCCCcEEEE----------EEecCCce-------EEEEEEEEeCCCc-EEEEECCCCEE
Confidence 654 3588899877543211 10000000 01122344 4554 55665555554
Q ss_pred EEEEEECCCCcEEEecC-CCCCceeeEEeecCCEEEEEEeCCCC
Q 004149 414 VIISVNVSSGELLRITP-AESNFSWSLLTLDGDNIIAVSSSPVD 456 (771)
Q Consensus 414 ~l~~~d~~tg~~~~l~~-~~~~~~~~~~s~d~~~l~~~~s~~~~ 456 (771)
..+|+.+++...... ....+....++|+++.++....+.+.
T Consensus 262 --~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~ 303 (312)
T 4ery_A 262 --YIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDK 303 (312)
T ss_dssp --EEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTC
T ss_pred --EEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCc
Confidence 445787887654443 33345556788888877655433333
No 259
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.42 E-value=3.5e-11 Score=127.80 Aligned_cols=270 Identities=12% Similarity=0.062 Sum_probs=136.8
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCe-EEEEecCCCCCC
Q 004149 100 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETL-IAYVAEEPSPSK 178 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~-la~~~~~~~~~~ 178 (771)
.....+|||||++|+..... .-.+|.+...++..++..... .|. ...++|||||++ ++|++......
T Consensus 41 ~~~~~a~spdg~~l~~~~~~---~v~~~~~~~~g~~~~~~~~~~--~g~------~~~~~~spdg~~l~~~~~~~~~~~- 108 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK---KWSSFAVKSPTEIVHEASHPI--GGH------PRANDADTNTRAIFLLAAKQPPYA- 108 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT---EEEEEEEEETTEEEEEEEEEC--CSS------GGGGCTTSCCEEEEEEECSSTTCC-
T ss_pred CCcEEEECCCCCEEEEEccc---eEEEEEECCCCCEEEeeEeec--CCC------CccEEECCCCCEEEEEEecCCcce-
Confidence 35678999999988655432 222333322455444333211 111 146899999997 45554411000
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEcc-CCceee-ccCC--CCCCccceEEEecCCCCC
Q 004149 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGEVQA-VKGI--PKSLSVGQVVWAPLNEGL 254 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~-~~~~~~-l~~~--~~~~~~~~~~wspDg~~~ 254 (771)
.|.. +.+. ....+.+|+++ .|+... +... .....+..++|||||+.
T Consensus 109 ------------------------~~~~---~~~~--~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~- 158 (365)
T 1jof_A 109 ------------------------VYAN---PFYK--FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETY- 158 (365)
T ss_dssp ------------------------EEEE---EESS--SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSE-
T ss_pred ------------------------eccc---eeec--CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCE-
Confidence 0000 0000 12457778776 354432 2101 12345678999999996
Q ss_pred ccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCC-CCcceec---C--CCCccccceeecCCC
Q 004149 255 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE-DLPVVNL---T--ESISSAFFPRFSPDG 328 (771)
Q Consensus 255 ~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~l---t--~~~~~~~~p~~SpDG 328 (771)
|++.. . ....|+++++ + +++.+.+ . .........+|||||
T Consensus 159 ---l~~~~-~-------------~~~~v~~~~~-----------------~~~g~~~~~~~~~~~~~g~~p~~~~~spdg 204 (365)
T 1jof_A 159 ---LYSAD-L-------------TANKLWTHRK-----------------LASGEVELVGSVDAPDPGDHPRWVAMHPTG 204 (365)
T ss_dssp ---EEEEE-T-------------TTTEEEEEEE-----------------CTTSCEEEEEEEECSSTTCCEEEEEECTTS
T ss_pred ---EEEEc-C-------------CCCEEEEEEE-----------------CCCCCEEEeeeEecCCCCCCCCEeEECCCC
Confidence 65443 1 1237888887 4 4554322 1 113346778999999
Q ss_pred CEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccc-----cCCCCCCc-cccCCCE
Q 004149 329 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLY-----SSSILSNP-WLSDGCT 402 (771)
Q Consensus 329 ~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~-----~~~~~~~~-~s~dg~~ 402 (771)
++|+...... +...+|.+|..+++.... . ..+..+.. .+.|.- ......++ |||||++
T Consensus 205 ~~l~v~~~~~--------~~v~v~~~~~~~g~~~~~---~-~~~~~~~~----~~~g~~~~~~~~~~~~~i~~~spdG~~ 268 (365)
T 1jof_A 205 NYLYALMEAG--------NRICEYVIDPATHMPVYT---H-HSFPLIPP----GIPDRDPETGKGLYRADVCALTFSGKY 268 (365)
T ss_dssp SEEEEEETTT--------TEEEEEEECTTTCCEEEE---E-EEEESSCT----TCCCBCTTTSSBSEEEEEEEECTTSSE
T ss_pred CEEEEEECCC--------CeEEEEEEeCCCCcEEEc---c-ceEEcCCC----CcCCcccccccccccccEEEECCCCCE
Confidence 9887665432 122344444434432100 0 00111100 010000 00134578 9999998
Q ss_pred EEEEeeeCC-----eeEEEEEECCCCcEEEe---c-CCCCCceeeEEee---cCCEEEEEEeCCCCCCeEEEEEe
Q 004149 403 MLLSSIWGS-----SQVIISVNVSSGELLRI---T-PAESNFSWSLLTL---DGDNIIAVSSSPVDVPQVKYGYF 465 (771)
Q Consensus 403 l~~~~~~~~-----~~~l~~~d~~tg~~~~l---~-~~~~~~~~~~~s~---d~~~l~~~~s~~~~p~~l~~~~~ 465 (771)
|+++....+ ...+|.++. +|+++.+ . ..........++| ||++|++..... ..+.+.+.
T Consensus 269 l~v~~~~~~~~~~~~i~v~~~~~-~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~---~~v~v~~~ 339 (365)
T 1jof_A 269 MFASSRANKFELQGYIAGFKLRD-CGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQE---GWLEIYRW 339 (365)
T ss_dssp EEEEEEESSTTSCCEEEEEEECT-TSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSS---CEEEEEEE
T ss_pred EEEECCCCCCCCCCeEEEEEECC-CCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCC---CeEEEEEE
Confidence 876554433 455665543 6777652 1 1222234567899 899877664322 34555554
No 260
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.40 E-value=1e-12 Score=139.21 Aligned_cols=286 Identities=12% Similarity=0.041 Sum_probs=159.9
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEE
Q 004149 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 128 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 128 (771)
.||||++|+-..... ...-...+++++............ .. ......+...+|||||+.++ .+.. + .+.
T Consensus 50 fSpDG~~las~s~d~---~~~wd~~v~~~~~~~~~~~~~~~~-~~-~~~~~~V~~~~~s~d~~~l~-~s~d--g---~v~ 118 (357)
T 4g56_B 50 YRRDGALLLAASSLS---SRTWGGSIWVFKDPEGAPNESLCT-AG-VQTEAGVTDVAWVSEKGILV-ASDS--G---AVE 118 (357)
T ss_dssp ECSSSCEEEEEECSS---SSSCCEEEEEESSCC---CGGGCS-EE-EECSSCEEEEEEETTTEEEE-EETT--S---CEE
T ss_pred ECCCCCEEEEEcCCC---CccccCeEEEEECCCCCcceeEec-cc-CCCCCCEEEEEEcCCCCEEE-EECC--C---EEE
Confidence 368999888654211 111245677766533321111110 00 01114578899999997664 3332 2 244
Q ss_pred Eec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccC
Q 004149 129 LWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE 206 (771)
Q Consensus 129 ~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (771)
+|+ .++...........| .+.+.+++|||||+.|+..+.+...+ .|+............+......+.|.+
T Consensus 119 lWd~~~~~~~~~~~~~~~~h-----~~~V~~v~~spdg~~l~sgs~dg~v~--iwd~~~~~~~~~~~~h~~~v~~v~~s~ 191 (357)
T 4g56_B 119 LWEILEKESLLVNKFAKYEH-----DDIVKTLSVFSDGTQAVSGGKDFSVK--VWDLSQKAVLKSYNAHSSEVNCVAACP 191 (357)
T ss_dssp EC--------CCCCEEECCC-----SSCEEEEEECSSSSEEEEEETTSCEE--EEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred EeeccccceeEEEeeccCCC-----CCCEEEEEECCCCCEEEEEeCCCeEE--EEECCCCcEEEEEcCCCCCEEEEEEcc
Confidence 552 222111111100011 11236899999999999887765433 333222221122222333344556777
Q ss_pred CcCc-ccCCccCceEEEEEccCCceeec-cCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEE
Q 004149 207 DWGE-TYAGKRQPSLFVININSGEVQAV-KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYA 284 (771)
Q Consensus 207 d~g~-~~~~~~~~~l~v~d~~~~~~~~l-~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~ 284 (771)
+... .+++..+..|.+||+.+++.... ........+..++|+|++.. ++.++. .+..|.+
T Consensus 192 ~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~----~la~g~--------------~d~~i~~ 253 (357)
T 4g56_B 192 GKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDD----TFACGD--------------ETGNVSL 253 (357)
T ss_dssp TCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTT----EEEEEE--------------SSSCEEE
T ss_pred CCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccc----eEEEee--------------cccceeE
Confidence 6533 34555668899999988875443 11233445778999999887 766652 2336888
Q ss_pred EecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCE-EEEEecCCCCCCCCccccccceeeecCCCCCC
Q 004149 285 VRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKF-LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF 362 (771)
Q Consensus 285 ~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~-l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~ 362 (771)
+|+ .+++ ...+......+...+|||||+. |+..+.+ ..|++||+.+++..
T Consensus 254 wd~-----------------~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D-----------~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 254 VNI-----------------KNPDSAQTSAVHSQNITGLAYSYHSSPFLASISED-----------CTVAVLDADFSEVF 305 (357)
T ss_dssp EES-----------------SCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETT-----------SCEEEECTTSCEEE
T ss_pred EEC-----------------CCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCC-----------CEEEEEECCCCcEe
Confidence 887 4443 4556666777889999999965 5544443 35889998876542
Q ss_pred CCccceeeEEecccccCCCCCcccccCCCCCCcccc-CCCEEEEEeeeCCeeEEEEEE
Q 004149 363 SSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS-DGCTMLLSSIWGSSQVIISVN 419 (771)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~l~~~d 419 (771)
.... +...+..++||| |++ ++++...++...+|.++
T Consensus 306 ~~~~--------------------H~~~V~~vafsP~d~~-~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 306 RDLS--------------------HRDFVTGVAWSPLDHS-KFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp EECC--------------------CSSCEEEEEECSSSTT-EEEEEETTSCEEEEECC
T ss_pred EECC--------------------CCCCEEEEEEeCCCCC-EEEEEcCCCeEEEEECC
Confidence 2110 111345778998 676 55677777877777654
No 261
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=99.40 E-value=6.4e-12 Score=127.54 Aligned_cols=217 Identities=15% Similarity=0.149 Sum_probs=132.4
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECC--------CCCCCCChhhhhc--
Q 004149 518 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNY--------RGSLGFGEEALQS-- 587 (771)
Q Consensus 518 g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~--------rG~~~~g~~~~~~-- 587 (771)
...+.+.+|.|.+ ..++.|+||.+||+... ..+||+|+.+++ +|+.++|. +...
T Consensus 89 s~~~~~~i~lP~~--~~~p~Pvii~i~~~~~~-------------~~~G~a~~~~~~~~v~~~~~~gs~g~g~-f~~ly~ 152 (375)
T 3pic_A 89 SISFTVTITYPSS--GTAPYPAIIGYGGGSLP-------------APAGVAMINFNNDNIAAQVNTGSRGQGK-FYDLYG 152 (375)
T ss_dssp EEEEEEEEECCSS--SCSSEEEEEEETTCSSC-------------CCTTCEEEEECHHHHSCCSSGGGTTCSH-HHHHHC
T ss_pred eeEEEEEEECCCC--CCCCccEEEEECCCccc-------------cCCCeEEEEecccccccccCCCCcccee-cccccC
Confidence 3568889999984 35788999999985321 257999999986 45545654 3321
Q ss_pred CCCCccccc--hhhHHHHHHHHHHcC--CCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhh------
Q 004149 588 LPGKVGSQD--VNDVLTAIDHVIDMG--LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV------ 657 (771)
Q Consensus 588 ~~~~~~~~~--~~D~~~~i~~l~~~~--~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~------ 657 (771)
....++... .-++.++++||..++ .+|++||+++|||+||..++++++.. ++|+++|..++.++-....
T Consensus 153 ~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D-~Ri~~~v~~~~g~~G~~~~R~~~~~ 231 (375)
T 3pic_A 153 SSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFE-KRIVLTLPQESGAGGSACWRISDYL 231 (375)
T ss_dssp TTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHC-TTEEEEEEESCCTTTTSCHHHHHHH
T ss_pred CccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcC-CceEEEEeccCCCCchhhhhhhhhh
Confidence 122344333 358999999999987 89999999999999999999999985 5899999887654321110
Q ss_pred ---cCCC--------CCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCcc---ccccCC-CCcEEEEeeCCCCccCcHH
Q 004149 658 ---GTTD--------IPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPI---SHISKV-KTPTIFLLGAQDLRVPVSN 722 (771)
Q Consensus 658 ---~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~---~~~~~i-~~P~Lii~G~~D~~vp~~~ 722 (771)
+..- ...|+. ..+ ..|... ...-|+ ..+.-+ ..|+|++.| +|..+++..
T Consensus 232 ~~~Ge~v~~~~~~~~e~~Wf~-~~~-----~~y~~~---------~~~lP~D~h~L~ALiAPRPllv~~g-~D~w~~~~g 295 (375)
T 3pic_A 232 KSQGANIQTASEIIGEDPWFS-TTF-----NSYVNQ---------VPVLPFDHHSLAALIAPRGLFVIDN-NIDWLGPQS 295 (375)
T ss_dssp HHTTCCCCCHHHHTTTCSCSC-GGG-----GGTTTC---------GGGSSCCHHHHHHTSTTSEEEEECC-CCGGGCHHH
T ss_pred cccCccccccccccCcccccc-cch-----hhhccc---------ccccCcCHHHHHHHhCCceEEEecC-CCcccCcHH
Confidence 1000 001110 000 000000 000111 112222 257999999 999998876
Q ss_pred HHHHHHHH----HhCCC--CEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 723 GLQYARAL----REKGV--ETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 723 ~~~~~~~l----~~~g~--~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
....+..+ +..|. ++.+....+.+|+.. +. +..+.+.+||+++|+
T Consensus 296 ~~~~~~~a~~VY~~lG~~d~~~~~~~ggH~Hc~f-p~---~~~~~~~~F~~k~L~ 346 (375)
T 3pic_A 296 CFGCMTAAHMAWQALGVSDHMGYSQIGAHAHCAF-PS---NQQSQLTAFVQKFLL 346 (375)
T ss_dssp HHHHHHHHHHHHHHTTCGGGEEEECCSCCSTTCC-CG---GGHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHcCCccceEEEeeCCCccccC-CH---HHHHHHHHHHHHHhC
Confidence 55444433 33454 466644333345322 22 234789999999985
No 262
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.40 E-value=7.2e-12 Score=131.70 Aligned_cols=229 Identities=12% Similarity=0.093 Sum_probs=140.7
Q ss_pred hcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCC
Q 004149 66 LANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQ 143 (771)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 143 (771)
......+.|.+|++..... ...+. ..+......+...+|||||++||..+..+ .+.+|+ .++..+....
T Consensus 97 ~~~s~dg~v~lWd~~~~~~-~~~~~-~~~~~H~~~V~~v~~spdg~~l~sgs~d~-----~i~iwd~~~~~~~~~~~~-- 167 (344)
T 4gqb_B 97 LVASDSGAVELWELDENET-LIVSK-FCKYEHDDIVSTVSVLSSGTQAVSGSKDI-----CIKVWDLAQQVVLSSYRA-- 167 (344)
T ss_dssp EEEETTSEEEEEEECTTSS-CEEEE-EEEECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECC--
T ss_pred EEEECCCEEEEEeccCCCc-eeEee-ccccCCCCCEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEcC--
Confidence 3344556778888754422 11111 00011224588999999999998876543 466663 3333222221
Q ss_pred cccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEE
Q 004149 144 TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVI 223 (771)
Q Consensus 144 ~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~ 223 (771)
..+. +.++.|+||++.++..+. .+..|.+|
T Consensus 168 -h~~~------V~~~~~~~~~~~~l~s~s-------------------------------------------~D~~v~iw 197 (344)
T 4gqb_B 168 -HAAQ------VTCVAASPHKDSVFLSCS-------------------------------------------EDNRILLW 197 (344)
T ss_dssp -CSSC------EEEEEECSSCTTEEEEEE-------------------------------------------TTSCEEEE
T ss_pred -cCCc------eEEEEecCCCCCceeeec-------------------------------------------cccccccc
Confidence 1112 268999999976654422 22578999
Q ss_pred EccCCceeec-cCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcC
Q 004149 224 NINSGEVQAV-KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKES 302 (771)
Q Consensus 224 d~~~~~~~~l-~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 302 (771)
|+.+++.... ........+..++|+|++.. ++.++. .+..|.++|+
T Consensus 198 d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~----~l~sg~--------------~dg~v~~wd~--------------- 244 (344)
T 4gqb_B 198 DTRCPKPASQIGCSAPGYLPTSLAWHPQQSE----VFVFGD--------------ENGTVSLVDT--------------- 244 (344)
T ss_dssp ETTSSSCEEECC----CCCEEEEEECSSCTT----EEEEEE--------------TTSEEEEEES---------------
T ss_pred cccccceeeeeecceeeccceeeeecCCCCc----ceEEec--------------cCCcEEEEEC---------------
Confidence 9998876543 11122335678899998877 766552 2347888897
Q ss_pred CCCCCc-ceecCCCCccccceeecCCCCE-EEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCC
Q 004149 303 SSEDLP-VVNLTESISSAFFPRFSPDGKF-LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEG 380 (771)
Q Consensus 303 ~~~~~~-~~~lt~~~~~~~~p~~SpDG~~-l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (771)
.+++ ...+..+...+...+|||||.. |+..+.+ ..|.+||+.+++...+..
T Consensus 245 --~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D-----------~~i~vwd~~~~~~~~~~~-------------- 297 (344)
T 4gqb_B 245 --KSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSED-----------CSLAVLDSSLSELFRSQA-------------- 297 (344)
T ss_dssp --CC--CCEEEECCSSCEEEEEECSSSSCCEEEEETT-----------SCEEEECTTCCEEEEECC--------------
T ss_pred --CCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCC-----------CeEEEEECCCCcEEEEcC--------------
Confidence 4444 4567777778899999999965 5555544 348889987765321110
Q ss_pred CCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEE
Q 004149 381 DCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 419 (771)
Q Consensus 381 ~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d 419 (771)
+...+..++|+||++.|+++...++...+|.++
T Consensus 298 ------H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 298 ------HRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp ------CSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred ------CCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 112355788999999888888888887777554
No 263
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.40 E-value=2.7e-11 Score=128.31 Aligned_cols=245 Identities=13% Similarity=0.134 Sum_probs=150.1
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
..+...+|||||++|+.....+ .+.+| ..++....+.... + .+.+++|+|||+.|+..+.
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~~h~---~------~v~~~~~~~~~~~l~s~~~---- 94 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSKDS-----SASVWYSLNGERLGTLDGHT---G------TIWSIDVDCFTKYCVTGSA---- 94 (369)
T ss_dssp SCEEEEEECTTSCEEEEEESSS-----CEEEEETTTCCEEEEECCCS---S------CEEEEEECTTSSEEEEEET----
T ss_pred ceEEEEEEcCCCCEEEEEeCCC-----EEEEEeCCCchhhhhhhhcC---C------cEEEEEEcCCCCEEEEEeC----
Confidence 4588899999999998775443 34555 3333333332111 1 1268999999999987643
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004149 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
+..|.+||+.+++.... ......+..+.|+|||+.
T Consensus 95 ----------------------------------------dg~i~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~--- 129 (369)
T 3zwl_B 95 ----------------------------------------DYSIKLWDVSNGQCVAT--WKSPVPVKRVEFSPCGNY--- 129 (369)
T ss_dssp ----------------------------------------TTEEEEEETTTCCEEEE--EECSSCEEEEEECTTSSE---
T ss_pred ----------------------------------------CCeEEEEECCCCcEEEE--eecCCCeEEEEEccCCCE---
Confidence 25799999998887666 345557889999999997
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCc--cccceeecCCCCEEEEE
Q 004149 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS--SAFFPRFSPDGKFLVFL 334 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~--~~~~p~~SpDG~~l~f~ 334 (771)
|+..+.... .....|.++|+.... ...... .........+..... .+....|+|||+.|+..
T Consensus 130 -l~~~~~~~~----------~~~g~i~~~d~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 193 (369)
T 3zwl_B 130 -FLAILDNVM----------KNPGSINIYEIERDS----ATHELT-KVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAG 193 (369)
T ss_dssp -EEEEECCBT----------TBCCEEEEEEEEECT----TTCCEE-EECSSCSEEEECCTTCCCEEEEEECGGGCEEEEE
T ss_pred -EEEecCCcc----------CCCCEEEEEEecCCc----cceeec-ccccceeeeccCCcCccceeEEEEcCCCCEEEEE
Confidence 777652200 112366677662110 000000 000112222223333 67889999999998876
Q ss_pred ecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeE
Q 004149 335 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 414 (771)
Q Consensus 335 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 414 (771)
+.+ ..|++||+.++... ...+.. ....+..++|+||++.|+.. ..++ .
T Consensus 194 ~~d-----------g~i~i~d~~~~~~~---------~~~~~~---------~~~~v~~~~~~~~~~~l~~~-~~d~--~ 241 (369)
T 3zwl_B 194 HKD-----------GKISKYDVSNNYEY---------VDSIDL---------HEKSISDMQFSPDLTYFITS-SRDT--N 241 (369)
T ss_dssp ETT-----------SEEEEEETTTTTEE---------EEEEEC---------CSSCEEEEEECTTSSEEEEE-ETTS--E
T ss_pred cCC-----------CEEEEEECCCCcEe---------EEEEec---------CCCceeEEEECCCCCEEEEe-cCCc--e
Confidence 654 35889998763211 111100 01134567899999876544 4344 4
Q ss_pred EEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCC
Q 004149 415 IISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSP 454 (771)
Q Consensus 415 l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~ 454 (771)
|..+|+.+++...............++++++.+++.....
T Consensus 242 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 242 SFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC
T ss_pred EEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCC
Confidence 6666888888776655555566778999999888776543
No 264
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.40 E-value=9.7e-11 Score=125.13 Aligned_cols=275 Identities=11% Similarity=0.109 Sum_probs=164.7
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
+.+...+|||||++|+..+..+ .+.+|+ .++....+..... ++..++|||||+.|+..+.+...
T Consensus 67 ~~V~~~~~sp~~~~l~s~s~D~-----~v~iWd~~~~~~~~~~~~h~~---------~v~~~~~s~~g~~las~~~d~~v 132 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSASQDG-----RLIVWNALTSQKTHAIKLHCP---------WVMECAFAPNGQSVACGGLDSAC 132 (380)
T ss_dssp SCEEEEEECTTSSCEEEEETTS-----EEEEEETTTTEEEEEEECCCT---------TCCCCEECTTSSEEEECCSSSCC
T ss_pred cEEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCccceEEecCCC---------CEEEEEECCCCCEEEEeeCCCcE
Confidence 4588899999999998776554 677774 3333333322111 22688999999999987766543
Q ss_pred CCCCccCCCC-------CCCCCCccCCCCCCcccccCCcC-cccCCccCceEEEEEccCCceeeccC----CCCCCccce
Q 004149 177 SKPTFSLGST-------KGGSSDKDCNSWKGQGDWEEDWG-ETYAGKRQPSLFVININSGEVQAVKG----IPKSLSVGQ 244 (771)
Q Consensus 177 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~d~g-~~~~~~~~~~l~v~d~~~~~~~~l~~----~~~~~~~~~ 244 (771)
+ .|+.... +.......+........|.++.+ ..+++..+..|.+||+.+++...... ......+..
T Consensus 133 ~--iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~ 210 (380)
T 3iz6_a 133 S--IFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLS 210 (380)
T ss_dssp E--EEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEE
T ss_pred E--EEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEE
Confidence 3 2322111 11112233444455566777644 35566678899999999987655421 112335667
Q ss_pred EEEec-CCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCC-CcceecCCCCccccce
Q 004149 245 VVWAP-LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-LPVVNLTESISSAFFP 322 (771)
Q Consensus 245 ~~wsp-Dg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~lt~~~~~~~~p 322 (771)
+.|+| ++.. |+..+ .+..|.++|+. .+ .....+..+...+...
T Consensus 211 ~~~~~~~~~~----l~sgs---------------~D~~v~~wd~~----------------~~~~~~~~~~~h~~~v~~v 255 (380)
T 3iz6_a 211 LSINSLNANM----FISGS---------------CDTTVRLWDLR----------------ITSRAVRTYHGHEGDINSV 255 (380)
T ss_dssp EEECSSSCCE----EEEEE---------------TTSCEEEEETT----------------TTCCCCEEECCCSSCCCEE
T ss_pred EEeecCCCCE----EEEEE---------------CCCeEEEEECC----------------CCCcceEEECCcCCCeEEE
Confidence 88877 6654 44443 23468888872 12 2345566677789999
Q ss_pred eecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCE
Q 004149 323 RFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCT 402 (771)
Q Consensus 323 ~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~ 402 (771)
.|+|||+.|+..+.+. .|.+||+.++.......... ....... ..+..++|+|||+.
T Consensus 256 ~~~p~~~~l~s~s~D~-----------~i~lwd~~~~~~~~~~~~~~-------~~~~~~~-----~~v~~~~~s~~g~~ 312 (380)
T 3iz6_a 256 KFFPDGQRFGTGSDDG-----------TCRLFDMRTGHQLQVYNREP-------DRNDNEL-----PIVTSVAFSISGRL 312 (380)
T ss_dssp EECTTSSEEEEECSSS-----------CEEEEETTTTEEEEEECCCC-------SSSCCSS-----CSCSEEEECSSSSE
T ss_pred EEecCCCeEEEEcCCC-----------eEEEEECCCCcEEEEecccc-------ccccccc-----CceEEEEECCCCCE
Confidence 9999999988777653 48899988765422110000 0000001 12456789999996
Q ss_pred EEEEeeeCCeeEEEEEECCCCcEEE-ec----CCCCCceeeEEeecCCEEEEE
Q 004149 403 MLLSSIWGSSQVIISVNVSSGELLR-IT----PAESNFSWSLLTLDGDNIIAV 450 (771)
Q Consensus 403 l~~~~~~~~~~~l~~~d~~tg~~~~-l~----~~~~~~~~~~~s~d~~~l~~~ 450 (771)
|+ +...++. ++.+|+.+++... +. .....+....|++||+.|+..
T Consensus 313 l~-~g~~dg~--i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg 362 (380)
T 3iz6_a 313 LF-AGYSNGD--CYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTG 362 (380)
T ss_dssp EE-EECTTSC--EEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEE
T ss_pred EE-EEECCCC--EEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEe
Confidence 64 4444444 5555877776543 31 222345667899999876543
No 265
>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP}
Probab=99.40 E-value=5.1e-12 Score=131.13 Aligned_cols=214 Identities=12% Similarity=0.052 Sum_probs=123.1
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHH-HHHHHHcCCC
Q 004149 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTA-IDHVIDMGLA 613 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~-i~~l~~~~~~ 613 (771)
+..|.||++||.........|...+..| ..||.|+++|+|| +|.+.. ....++++.+. ++.+.+. .
T Consensus 79 ~~~~~lv~lhG~~~~~~~~~~~~~~~~L-~~~~~v~~~d~~G---~G~~~~-------~~~~~~~~~~~~~~~l~~~--~ 145 (319)
T 3lcr_A 79 QLGPQLILVCPTVMTTGPQVYSRLAEEL-DAGRRVSALVPPG---FHGGQA-------LPATLTVLVRSLADVVQAE--V 145 (319)
T ss_dssp CSSCEEEEECCSSTTCSGGGGHHHHHHH-CTTSEEEEEECTT---SSTTCC-------EESSHHHHHHHHHHHHHHH--H
T ss_pred CCCCeEEEECCCCcCCCHHHHHHHHHHh-CCCceEEEeeCCC---CCCCCC-------CCCCHHHHHHHHHHHHHHh--c
Confidence 3468899999942222245788888888 7899999999999 443211 01123333322 2223222 1
Q ss_pred CCCeEEEEEcChhHHHHHHHHHhC---CCceeEEEecCCccchhhhhcCCCCCcch--hhhhccCCCCCcCCCCCC-hhh
Q 004149 614 NPSKVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLCNLALMVGTTDIPDWC--YVESYGSKGKDSFTESPS-VED 687 (771)
Q Consensus 614 d~~ri~l~G~S~GG~~a~~~a~~~---p~~~~a~v~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~ 687 (771)
+.+++.|+||||||.+++.++.++ |+.++++|+.++....... .....+. +....... ...+..... ...
T Consensus 146 ~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 221 (319)
T 3lcr_A 146 ADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDG---GRPEELFRSALNERFVE-YLRLTGGGNLSQR 221 (319)
T ss_dssp TTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSC---CHHHHHHHHHHHHHHHH-HHHHHCCCCHHHH
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccc---hhhHHHHHHHHHHHHhh-hhcccCCCchhHH
Confidence 236899999999999999999887 8889999988765321100 0000000 00000000 000000000 011
Q ss_pred ---HHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHH
Q 004149 688 ---LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGL 764 (771)
Q Consensus 688 ---~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~ 764 (771)
...+...........+++|+|+++|++ ..+++.....+.+.+.. .++++.+++..|.+..++...++.+.|.+
T Consensus 222 l~~~~~~~~~~~~~~~~~i~~PvLli~g~~-~~~~~~~~~~~~~~~~~---~~~~~~~~g~H~~~~~~~~~~~va~~i~~ 297 (319)
T 3lcr_A 222 ITAQVWCLELLRGWRPEGLTAPTLYVRPAQ-PLVEQEKPEWRGDVLAA---MGQVVEAPGDHFTIIEGEHVASTAHIVGD 297 (319)
T ss_dssp HHHHHHHHHHTTTCCCCCCSSCEEEEEESS-CSSSCCCTHHHHHHHHT---CSEEEEESSCTTGGGSTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcCCCEEEEEeCC-CCCCcccchhhhhcCCC---CceEEEeCCCcHHhhCcccHHHHHHHHHH
Confidence 111111111122357899999999998 56666777777776654 36788888744444444677789999999
Q ss_pred HHHHH
Q 004149 765 WFKKY 769 (771)
Q Consensus 765 wl~~~ 769 (771)
||++.
T Consensus 298 fL~~~ 302 (319)
T 3lcr_A 298 WLREA 302 (319)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99865
No 266
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.40 E-value=1.7e-11 Score=130.17 Aligned_cols=197 Identities=15% Similarity=0.117 Sum_probs=126.4
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEE
Q 004149 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFEL 129 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~ 129 (771)
||||+.++..... ..+.+++|++... .....+. .. +.+...+|||||++|+..++.. +..+
T Consensus 142 SpDg~~la~as~~-------~d~~i~iwd~~~~-~~~~~~~-~~-----~~V~~v~fspdg~~l~s~s~~~-----~~~~ 202 (365)
T 4h5i_A 142 SREGTVAAIASSK-------VPAIMRIIDPSDL-TEKFEIE-TR-----GEVKDLHFSTDGKVVAYITGSS-----LEVI 202 (365)
T ss_dssp CTTSSCEEEEESC-------SSCEEEEEETTTT-EEEEEEE-CS-----SCCCEEEECTTSSEEEEECSSC-----EEEE
T ss_pred cCCCCEEEEEECC-------CCCEEEEeECCCC-cEEEEeC-CC-----CceEEEEEccCCceEEecccee-----EEEE
Confidence 6788887765432 3356777776332 1112221 21 4578899999999999876433 5666
Q ss_pred e-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCc
Q 004149 130 W-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDW 208 (771)
Q Consensus 130 ~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 208 (771)
| ..+...... ...... ..+..++|||||+.|+..+.+..
T Consensus 203 ~~~~~~~~~~~-~~~~~~------~~v~~v~fspdg~~l~~~s~d~~--------------------------------- 242 (365)
T 4h5i_A 203 STVTGSCIARK-TDFDKN------WSLSKINFIADDTVLIAASLKKG--------------------------------- 242 (365)
T ss_dssp ETTTCCEEEEE-CCCCTT------EEEEEEEEEETTEEEEEEEESSS---------------------------------
T ss_pred EeccCcceeee-ecCCCC------CCEEEEEEcCCCCEEEEEecCCc---------------------------------
Confidence 6 333322211 111111 12368999999999998765431
Q ss_pred CcccCCccCceEEEEEccCCceeecc---CCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEE
Q 004149 209 GETYAGKRQPSLFVININSGEVQAVK---GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 285 (771)
Q Consensus 209 g~~~~~~~~~~l~v~d~~~~~~~~l~---~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~ 285 (771)
....++.|++..+....+. -......+..++|||||+. |+..+ .+..|.++
T Consensus 243 -------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~----lasgs---------------~D~~V~iw 296 (365)
T 4h5i_A 243 -------KGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGEL----AVLAS---------------NDNSIALV 296 (365)
T ss_dssp -------CCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCE----EEEEE---------------TTSCEEEE
T ss_pred -------ceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCc----eEEEc---------------CCCEEEEE
Confidence 2246788888766543220 0233346788999999997 77765 23478889
Q ss_pred ecccccchhhhhhhhcCCCCCCcc-ee-cCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCC
Q 004149 286 RVSLYKSEASELELKESSSEDLPV-VN-LTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 359 (771)
Q Consensus 286 d~~~~~~~~~~~~~~~~~~~~~~~-~~-lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~ 359 (771)
|+ .+++. .. +..+...+.+.+|||||++||-.+.+. .|.+|++..+
T Consensus 297 d~-----------------~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~-----------tvrvw~ip~~ 344 (365)
T 4h5i_A 297 KL-----------------KDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAAN-----------TIHIIKLPLN 344 (365)
T ss_dssp ET-----------------TTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTS-----------EEEEEECCTT
T ss_pred EC-----------------CCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCC-----------eEEEEEcCCC
Confidence 98 66654 33 456777899999999999999888764 4788887643
No 267
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.39 E-value=7.7e-12 Score=136.16 Aligned_cols=206 Identities=12% Similarity=0.025 Sum_probs=134.1
Q ss_pred cccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCc
Q 004149 201 QGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 280 (771)
Q Consensus 201 ~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~ 280 (771)
...|.++....+.+.....|++||+.+++..... ......+..++|+|||+. +++++. ...
T Consensus 174 ~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----l~~~~~--------------~~~ 234 (433)
T 3bws_A 174 TISIPEHNELWVSQMQANAVHVFDLKTLAYKATV-DLTGKWSKILLYDPIRDL----VYCSNW--------------ISE 234 (433)
T ss_dssp EEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEE-ECSSSSEEEEEEETTTTE----EEEEET--------------TTT
T ss_pred EEEEcCCCEEEEEECCCCEEEEEECCCceEEEEE-cCCCCCeeEEEEcCCCCE----EEEEec--------------CCC
Confidence 3456665433344455689999999988765441 233446778999999997 666542 233
Q ss_pred eeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCC
Q 004149 281 ALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 281 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
.|+++|+ .+++..........+....|+|||+.|+......... ......|+++|+.+++
T Consensus 235 ~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~---~~~dg~i~~~d~~~~~ 294 (433)
T 3bws_A 235 DISVIDR-----------------KTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQ---ESGGGRLGIYSMDKEK 294 (433)
T ss_dssp EEEEEET-----------------TTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTT---CSCCEEEEEEETTTTE
T ss_pred cEEEEEC-----------------CCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCcc---ccCCCeEEEEECCCCc
Confidence 7999998 5666554444455688899999999998877543100 0123579999988765
Q ss_pred CCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEE
Q 004149 361 NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLL 440 (771)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~ 440 (771)
........ ..+..++|+|||+.|+++...++ .++.+|+.+++...............+
T Consensus 295 ~~~~~~~~--------------------~~~~~~~~~~~g~~l~~~~~~~~--~v~v~d~~~~~~~~~~~~~~~~~~~~~ 352 (433)
T 3bws_A 295 LIDTIGPP--------------------GNKRHIVSGNTENKIYVSDMCCS--KIEVYDLKEKKVQKSIPVFDKPNTIAL 352 (433)
T ss_dssp EEEEEEEE--------------------ECEEEEEECSSTTEEEEEETTTT--EEEEEETTTTEEEEEEECSSSEEEEEE
T ss_pred EEeeccCC--------------------CCcceEEECCCCCEEEEEecCCC--EEEEEECCCCcEEEEecCCCCCCeEEE
Confidence 32211000 02335689999998888765554 566678888877655544444566789
Q ss_pred eecCCEEEEEEeCCCCC-----------CeEEEEEecc
Q 004149 441 TLDGDNIIAVSSSPVDV-----------PQVKYGYFVD 467 (771)
Q Consensus 441 s~d~~~l~~~~s~~~~p-----------~~l~~~~~~~ 467 (771)
+++++.+++........ ..+++.++.+
T Consensus 353 s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 353 SPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp CTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred cCCCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 99999888877654433 3677766543
No 268
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.39 E-value=9.2e-12 Score=134.93 Aligned_cols=278 Identities=8% Similarity=-0.006 Sum_probs=159.7
Q ss_pred eEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCc
Q 004149 55 QAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQ 134 (771)
Q Consensus 55 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~ 134 (771)
.++|+.+..-+......+.++++++.... ..+..... .......|+|||++||.....+ .+.+|+-..
T Consensus 61 ~~~~s~~g~~l~~~~~d~~v~i~d~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~ 128 (420)
T 3vl1_A 61 GNTFEKVGSHLYKARLDGHDFLFNTIIRD--GSKMLKRA-----DYTAVDTAKLQMRRFILGTTEG-----DIKVLDSNF 128 (420)
T ss_dssp TCEEEEEETTEEEEEETTEEEEEECCSEE--TTTTSCSC-----CEEEEEEECSSSCEEEEEETTS-----CEEEECTTS
T ss_pred ceeeeecCCeEEEEEcCCcEEEEEecccc--eeeEEecC-----CceEEEEEecCCCEEEEEECCC-----CEEEEeCCC
Confidence 45666666666655566778887764332 11111111 2345567999999998876543 455663222
Q ss_pred ceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCC
Q 004149 135 LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAG 214 (771)
Q Consensus 135 ~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~ 214 (771)
....... ....+ .+.+++|+|||+.|+..+.
T Consensus 129 ~~~~~~~-~~h~~------~v~~~~~~~~~~~l~s~s~------------------------------------------ 159 (420)
T 3vl1_A 129 NLQREID-QAHVS------EITKLKFFPSGEALISSSQ------------------------------------------ 159 (420)
T ss_dssp CEEEEET-TSSSS------CEEEEEECTTSSEEEEEET------------------------------------------
T ss_pred cceeeec-ccccC------ccEEEEECCCCCEEEEEeC------------------------------------------
Confidence 2222221 11111 2368999999998887643
Q ss_pred ccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchh
Q 004149 215 KRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 294 (771)
Q Consensus 215 ~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 294 (771)
...|.+||+.+++..... ......+..++|+|||+. |+..+ .+..|.++|+
T Consensus 160 --d~~i~iwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~----l~s~~---------------~d~~v~iwd~------- 210 (420)
T 3vl1_A 160 --DMQLKIWSVKDGSNPRTL-IGHRATVTDIAIIDRGRN----VLSAS---------------LDGTIRLWEC------- 210 (420)
T ss_dssp --TSEEEEEETTTCCCCEEE-ECCSSCEEEEEEETTTTE----EEEEE---------------TTSCEEEEET-------
T ss_pred --CCeEEEEeCCCCcCceEE-cCCCCcEEEEEEcCCCCE----EEEEc---------------CCCcEEEeEC-------
Confidence 257999999877654331 334556889999999997 77665 2235667776
Q ss_pred hhhhhhcCCCCCCcc-eecCC------------------------CCccccceeecCCCCEEEEEecCCCCCCCCccccc
Q 004149 295 SELELKESSSEDLPV-VNLTE------------------------SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATD 349 (771)
Q Consensus 295 ~~~~~~~~~~~~~~~-~~lt~------------------------~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~ 349 (771)
.+++. ..+.. ....+..+.|||||+.|+..+.+.
T Consensus 211 ----------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg----------- 269 (420)
T 3vl1_A 211 ----------GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG----------- 269 (420)
T ss_dssp ----------TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS-----------
T ss_pred ----------CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC-----------
Confidence 32222 11211 124466788999999988766553
Q ss_pred cceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc--EEE
Q 004149 350 SLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE--LLR 427 (771)
Q Consensus 350 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~--~~~ 427 (771)
.|.+||+.+++.... +.. .+...+..++|+|+++.++++...++. |..+|+.+++ +..
T Consensus 270 ~i~i~d~~~~~~~~~---------~~~---------~~~~~v~~~~~~~~~~~~l~~g~~dg~--i~vwd~~~~~~~~~~ 329 (420)
T 3vl1_A 270 VITVHNVFSKEQTIQ---------LPS---------KFTCSCNSLTVDGNNANYIYAGYENGM--LAQWDLRSPECPVGE 329 (420)
T ss_dssp CEEEEETTTCCEEEE---------ECC---------TTSSCEEEEEECSSCTTEEEEEETTSE--EEEEETTCTTSCSEE
T ss_pred eEEEEECCCCceeEE---------ccc---------ccCCCceeEEEeCCCCCEEEEEeCCCe--EEEEEcCCCcCchhh
Confidence 488999877553111 000 011134577899999855566665655 4455777664 445
Q ss_pred ecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004149 428 ITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 428 l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~ 467 (771)
+...........++++++.|+ +.+ .+ ..+.+.++..
T Consensus 330 ~~~~~~~~v~~~~~~~~~~l~-s~~-~d--~~v~iw~~~~ 365 (420)
T 3vl1_A 330 FLINEGTPINNVYFAAGALFV-SSG-FD--TSIKLDIISD 365 (420)
T ss_dssp EEESTTSCEEEEEEETTEEEE-EET-TT--EEEEEEEECC
T ss_pred hhccCCCCceEEEeCCCCEEE-Eec-CC--ccEEEEeccC
Confidence 544233223344666665433 332 22 3455555543
No 269
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.38 E-value=2.2e-11 Score=128.78 Aligned_cols=269 Identities=13% Similarity=0.087 Sum_probs=165.1
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
..+...+|||||++||..+..+ .+.+|+ .+.....+..... ++..++|||||+.|+..+.+...
T Consensus 65 ~~V~~~~~s~d~~~l~s~s~Dg-----~v~vWd~~~~~~~~~~~~~~~---------~v~~~~~sp~g~~lasg~~d~~i 130 (354)
T 2pbi_B 65 NKVLCMDWCKDKRRIVSSSQDG-----KVIVWDSFTTNKEHAVTMPCT---------WVMACAYAPSGCAIACGGLDNKC 130 (354)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----EEEEEETTTCCEEEEEECSSS---------CCCEEEECTTSSEEEEESTTSEE
T ss_pred CeEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCCcceEEecCCC---------CEEEEEECCCCCEEEEeeCCCCE
Confidence 4588899999999998776554 677774 2333333332211 23689999999999987655432
Q ss_pred CCCCccCCCCCC------CCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecC
Q 004149 177 SKPTFSLGSTKG------GSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPL 250 (771)
Q Consensus 177 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspD 250 (771)
. .|....... ......+........|.++....+++..+..|.+||+.+++..... ......+..+.|+|+
T Consensus 131 ~--v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~-~~h~~~v~~~~~~~~ 207 (354)
T 2pbi_B 131 S--VYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSF-HGHGADVLCLDLAPS 207 (354)
T ss_dssp E--EEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECCC
T ss_pred E--EEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEE-cCCCCCeEEEEEEeC
Confidence 1 121111100 0111123333345567887666777778899999999988765431 223345667788774
Q ss_pred --CCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCC
Q 004149 251 --NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPD 327 (771)
Q Consensus 251 --g~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpD 327 (771)
|+. |+..+ .+..|.++|+ .+++ ...+..+...+...+|+||
T Consensus 208 ~~g~~----l~sgs---------------~Dg~v~~wd~-----------------~~~~~~~~~~~h~~~v~~v~~~p~ 251 (354)
T 2pbi_B 208 ETGNT----FVSGG---------------CDKKAMVWDM-----------------RSGQCVQAFETHESDVNSVRYYPS 251 (354)
T ss_dssp SSCCE----EEEEE---------------TTSCEEEEET-----------------TTCCEEEEECCCSSCEEEEEECTT
T ss_pred CCCCE----EEEEe---------------CCCeEEEEEC-----------------CCCcEEEEecCCCCCeEEEEEeCC
Confidence 554 55444 3347888898 5554 3455666777899999999
Q ss_pred CCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEe
Q 004149 328 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 407 (771)
Q Consensus 328 G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~ 407 (771)
|+.|+..+.+. .|.+||+.++..... ... ... ......++|+|||+.| ++.
T Consensus 252 ~~~l~s~s~D~-----------~v~lwd~~~~~~~~~----------~~~--~~~-----~~~~~~~~~s~~g~~l-~~g 302 (354)
T 2pbi_B 252 GDAFASGSDDA-----------TCRLYDLRADREVAI----------YSK--ESI-----IFGASSVDFSLSGRLL-FAG 302 (354)
T ss_dssp SSEEEEEETTS-----------CEEEEETTTTEEEEE----------ECC--TTC-----CSCEEEEEECTTSSEE-EEE
T ss_pred CCEEEEEeCCC-----------eEEEEECCCCcEEEE----------EcC--CCc-----ccceeEEEEeCCCCEE-EEE
Confidence 99988777653 488889876532111 000 000 0023457899999855 455
Q ss_pred eeCCeeEEEEEECCCCcEE-EecCCCCCceeeEEeecCCEEEEEE
Q 004149 408 IWGSSQVIISVNVSSGELL-RITPAESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 408 ~~~~~~~l~~~d~~tg~~~-~l~~~~~~~~~~~~s~d~~~l~~~~ 451 (771)
..++...+| |+.+++.. .+......+....|+||++.|+...
T Consensus 303 ~~d~~i~vw--d~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 303 YNDYTINVW--DVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp ETTSCEEEE--ETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred ECCCcEEEE--ECCCCceEEEEECCCCcEEEEEECCCCCEEEEEc
Confidence 555555555 77677644 4444444566678999998776554
No 270
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.37 E-value=1.9e-11 Score=131.27 Aligned_cols=264 Identities=16% Similarity=0.082 Sum_probs=148.1
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCccc---------ccccCCCcccceeecCCCCeEEE
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVH---------GSVYADGWFEGISWNSDETLIAY 169 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~wSpDg~~la~ 169 (771)
..+...+|||||++||...+ +..++|.+ ..++....+....... ...-.+..+.+++|||||+.|+.
T Consensus 65 ~~V~~v~fspdg~~la~g~~---~~v~i~~~-~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGCN---KTTQVYRV-SDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp SCCCEEEECTTSSEEEEECB---SCEEEEET-TTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CEEEEEEECCCCCEEEEEcC---CcEEEEEe-cCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 44778999999999987643 22222222 2333322221110000 00001113468999999999998
Q ss_pred EecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEec
Q 004149 170 VAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP 249 (771)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wsp 249 (771)
.+.+...+ .|+............+......+.|.++....+++..+..|.+||+.+++.... ......+..++|+|
T Consensus 141 ~~~d~~i~--iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~--~~~~~~v~~~~~~~ 216 (393)
T 1erj_A 141 GAEDRLIR--IWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLT--LSIEDGVTTVAVSP 216 (393)
T ss_dssp EETTSCEE--EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE--EECSSCEEEEEECS
T ss_pred EcCCCeEE--EEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEE--EEcCCCcEEEEEEC
Confidence 87765433 343322221122223344445677888876777777789999999999876554 33444677889999
Q ss_pred -CCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eec-------CCCCcccc
Q 004149 250 -LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNL-------TESISSAF 320 (771)
Q Consensus 250 -Dg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~l-------t~~~~~~~ 320 (771)
||+. |+..+ .+..|.++|+ .++.. ..+ ..+...+.
T Consensus 217 ~~~~~----l~~~s---------------~d~~v~iwd~-----------------~~~~~~~~~~~~~~~~~~h~~~v~ 260 (393)
T 1erj_A 217 GDGKY----IAAGS---------------LDRAVRVWDS-----------------ETGFLVERLDSENESGTGHKDSVY 260 (393)
T ss_dssp TTCCE----EEEEE---------------TTSCEEEEET-----------------TTCCEEEEEC------CCCSSCEE
T ss_pred CCCCE----EEEEc---------------CCCcEEEEEC-----------------CCCcEEEeecccccCCCCCCCCEE
Confidence 7776 66554 2336777787 44432 233 33455688
Q ss_pred ceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccce--eeEEecccccCCCCCcccccCCCCCCcccc
Q 004149 321 FPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKI--VDVIPVVQCAEGDCFPGLYSSSILSNPWLS 398 (771)
Q Consensus 321 ~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~ 398 (771)
+..|+|||+.|+..+.+. .|.+||+.+.......... ......+ .+ +...+..++|++
T Consensus 261 ~v~~~~~g~~l~s~s~d~-----------~v~~wd~~~~~~~~~~~~~~~~~~~~~~--------~~-h~~~v~~~~~~~ 320 (393)
T 1erj_A 261 SVVFTRDGQSVVSGSLDR-----------SVKLWNLQNANNKSDSKTPNSGTCEVTY--------IG-HKDFVLSVATTQ 320 (393)
T ss_dssp EEEECTTSSEEEEEETTS-----------EEEEEEC---------------CEEEEE--------EC-CSSCEEEEEECG
T ss_pred EEEECCCCCEEEEEeCCC-----------EEEEEECCCCCCcccccCCCCCcceEEE--------ec-ccCcEEEEEECC
Confidence 999999999988766553 5888888664432110000 0000000 00 111244678999
Q ss_pred CCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 004149 399 DGCTMLLSSIWGSSQVIISVNVSSGELLRIT 429 (771)
Q Consensus 399 dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 429 (771)
|++.| ++...++. +..+|+.+++.....
T Consensus 321 ~~~~l-~sgs~D~~--v~iwd~~~~~~~~~l 348 (393)
T 1erj_A 321 NDEYI-LSGSKDRG--VLFWDKKSGNPLLML 348 (393)
T ss_dssp GGCEE-EEEETTSE--EEEEETTTCCEEEEE
T ss_pred CCCEE-EEEeCCCe--EEEEECCCCeEEEEE
Confidence 99865 45555554 555588888765443
No 271
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.37 E-value=2.6e-10 Score=121.82 Aligned_cols=274 Identities=9% Similarity=0.024 Sum_probs=157.3
Q ss_pred eeEEEEEEeecCCCCccceeecCCccccccceEEEeCC-CCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCccccc
Q 004149 71 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSP-SGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGS 148 (771)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 148 (771)
.+.+.+|++.... ....+.. ......+...+||| +++.|+...... .+.+| ..+...+.........
T Consensus 95 dg~i~iwd~~~~~-~~~~~~~---~~h~~~v~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~~~-- 163 (383)
T 3ei3_B 95 GGDIILWDYDVQN-KTSFIQG---MGPGDAITGMKFNQFNTNQLFVSSIRG-----ATTLRDFSGSVIQVFAKTDSWD-- 163 (383)
T ss_dssp TSCEEEEETTSTT-CEEEECC---CSTTCBEEEEEEETTEEEEEEEEETTT-----EEEEEETTSCEEEEEECCCCSS--
T ss_pred CCeEEEEeCCCcc-cceeeec---CCcCCceeEEEeCCCCCCEEEEEeCCC-----EEEEEECCCCceEEEeccCCCC--
Confidence 3567777764332 1112211 11225688999999 677777665433 45566 3333333332222111
Q ss_pred ccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCC
Q 004149 149 VYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG 228 (771)
Q Consensus 149 ~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~ 228 (771)
..+.+++|+|||+.|+..+. ...|++||+.+.
T Consensus 164 ----~~v~~~~~~~~~~~l~~~~~--------------------------------------------d~~i~i~d~~~~ 195 (383)
T 3ei3_B 164 ----YWYCCVDVSVSRQMLATGDS--------------------------------------------TGRLLLLGLDGH 195 (383)
T ss_dssp ----CCEEEEEEETTTTEEEEEET--------------------------------------------TSEEEEEETTSC
T ss_pred ----CCeEEEEECCCCCEEEEECC--------------------------------------------CCCEEEEECCCC
Confidence 12368999999998887643 368999999766
Q ss_pred ceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc
Q 004149 229 EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP 308 (771)
Q Consensus 229 ~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 308 (771)
....+ ......+..++|+|+++. +++++. .+..|.++|+... ...+.
T Consensus 196 ~~~~~--~~h~~~v~~~~~~~~~~~----~l~s~~--------------~d~~i~iwd~~~~-------------~~~~~ 242 (383)
T 3ei3_B 196 EIFKE--KLHKAKVTHAEFNPRCDW----LMATSS--------------VDATVKLWDLRNI-------------KDKNS 242 (383)
T ss_dssp EEEEE--ECSSSCEEEEEECSSCTT----EEEEEE--------------TTSEEEEEEGGGC-------------CSTTC
T ss_pred EEEEe--ccCCCcEEEEEECCCCCC----EEEEEe--------------CCCEEEEEeCCCC-------------Ccccc
Confidence 66666 344557889999999996 655552 3347888887210 00133
Q ss_pred ceecCCCCccccceeecC-CCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccc
Q 004149 309 VVNLTESISSAFFPRFSP-DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLY 387 (771)
Q Consensus 309 ~~~lt~~~~~~~~p~~Sp-DG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~ 387 (771)
......+...+.++.|+| ||+.|+..+.+ ..|.+||+.+++.......... ..+. +
T Consensus 243 ~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d-----------~~i~iwd~~~~~~~~~~~~~~~----------~~~~--~ 299 (383)
T 3ei3_B 243 YIAEMPHEKPVNAAYFNPTDSTKLLTTDQR-----------NEIRVYSSYDWSKPDQIIIHPH----------RQFQ--H 299 (383)
T ss_dssp EEEEEECSSCEEEEEECTTTSCEEEEEESS-----------SEEEEEETTBTTSCSEEEECCB----------CCCT--T
T ss_pred eEEEecCCCceEEEEEcCCCCCEEEEEcCC-----------CcEEEEECCCCccccccccccc----------cccc--c
Confidence 333335666789999999 99999877754 3589999887665322111100 0000 0
Q ss_pred cCCCCCCccccCCCEEEEEeee------CCeeEEEEEECCCCcEEEecCC---CCCceeeEEeecCCEEEEEEeCCCCCC
Q 004149 388 SSSILSNPWLSDGCTMLLSSIW------GSSQVIISVNVSSGELLRITPA---ESNFSWSLLTLDGDNIIAVSSSPVDVP 458 (771)
Q Consensus 388 ~~~~~~~~~s~dg~~l~~~~~~------~~~~~l~~~d~~tg~~~~l~~~---~~~~~~~~~s~d~~~l~~~~s~~~~p~ 458 (771)
. ..-...|+|++..+.+.... .....|..+|+.+++....... ........|+++++.|+.. + + .
T Consensus 300 ~-~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~-s--d--~ 373 (383)
T 3ei3_B 300 L-TPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASG-M--G--F 373 (383)
T ss_dssp S-CCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEE-E--T--T
T ss_pred c-cceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEe-c--C--C
Confidence 0 11123566666644433221 1233466668888876544332 2334445899999977655 3 2 4
Q ss_pred eEEEEEe
Q 004149 459 QVKYGYF 465 (771)
Q Consensus 459 ~l~~~~~ 465 (771)
.|.+.++
T Consensus 374 ~i~iw~~ 380 (383)
T 3ei3_B 374 NILIWNR 380 (383)
T ss_dssp EEEEEEC
T ss_pred cEEEEec
Confidence 4666554
No 272
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=99.37 E-value=2.8e-12 Score=130.33 Aligned_cols=227 Identities=11% Similarity=0.080 Sum_probs=134.2
Q ss_pred CCceEEEEEEecCCCC-----CCCCCcEEEEEcCCCCCCCCCcchH---HHHHHHHCCcEEEEECCC--CCC---C----
Q 004149 517 AQKPFEAIFVSSSHKK-----DCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYR--GSL---G---- 579 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~-----~~~~~p~vv~~HGg~~~~~~~~~~~---~~~~la~~G~~V~~~d~r--G~~---~---- 579 (771)
-|.++...+|.|+++. ..+++|+|+++||.+.+ ...|.. ..+.+.+.|..+++++.. +.. +
T Consensus 24 l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~--~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~ 101 (299)
T 4fol_A 24 TKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCT--PDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGS 101 (299)
T ss_dssp TSSEEEEEEEECGGGGCC------CBCEEEEECCTTCC--HHHHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTTCC
T ss_pred cCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCC--hHHHHHhchHhHHHHHcCchhhccCCCcceeecCCCcccc
Confidence 3667888999998763 35789999999996654 223432 334567789999999852 110 0
Q ss_pred --CC--hhhhhcC-------CCCccccchhhHHHHHHHHHHcCC-------CCCCeEEEEEcChhHHHHHHHHHhC--CC
Q 004149 580 --FG--EEALQSL-------PGKVGSQDVNDVLTAIDHVIDMGL-------ANPSKVTVVGGSHGGFLTTHLIGQA--PD 639 (771)
Q Consensus 580 --~g--~~~~~~~-------~~~~~~~~~~D~~~~i~~l~~~~~-------~d~~ri~l~G~S~GG~~a~~~a~~~--p~ 639 (771)
.| ..+.... ...+...-.+++... +.++.. .+.++.+|.|+||||+.|+.++.++ |+
T Consensus 102 ~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~---i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~ 178 (299)
T 4fol_A 102 WDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQT---LDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGK 178 (299)
T ss_dssp SSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHH---HHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGT
T ss_pred cccccCCccccccccCccccCccHHHHHHHHhHHH---HHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCC
Confidence 00 0000000 000111112334333 333322 2456899999999999999999985 67
Q ss_pred ceeEEEecCCccchhhhhcCCCCCcchh---hhhccCCCCCcCCCCCChhhHHHHhhcCccccc---cCC-CCcEEEEee
Q 004149 640 KFVAAAARNPLCNLALMVGTTDIPDWCY---VESYGSKGKDSFTESPSVEDLTRFHSKSPISHI---SKV-KTPTIFLLG 712 (771)
Q Consensus 640 ~~~a~v~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~---~~i-~~P~Lii~G 712 (771)
.++++.+.+|.++.... .|.. ...++. +...+...++...+ .+. ..+++|-+|
T Consensus 179 ~~~~~~s~s~~~~p~~~-------~~~~~~~~~~~g~-------------~~~~~~~~d~~~l~~~~~~~~~~~i~id~G 238 (299)
T 4fol_A 179 RYKSCSAFAPIVNPSNV-------PWGQKAFKGYLGE-------------EKAQWEAYDPCLLIKNIRHVGDDRILIHVG 238 (299)
T ss_dssp CCSEEEEESCCCCGGGS-------HHHHHHHHHHTC------------------CGGGCHHHHGGGSCCCTTCCEEEEEE
T ss_pred ceEEEEecccccCcccc-------ccccccccccccc-------------chhhhhhcCHHHHHHhcccCCCCceEEEec
Confidence 88999999998764321 1110 011111 11122233333322 222 357999999
Q ss_pred CCCCccCcH-HHHHHHHHHHhCCCC--EEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 713 AQDLRVPVS-NGLQYARALREKGVE--TKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 713 ~~D~~vp~~-~~~~~~~~l~~~g~~--~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
+.|.+.... ..+.|.++++++|.+ +++...||.+|.+.- ...+++.-+.|..++|+
T Consensus 239 ~~D~f~~~~l~~~~f~~a~~~~g~~~~~~~r~~~GydHsy~f---~~~fi~dhl~fha~~Lg 297 (299)
T 4fol_A 239 DSDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYF---VSTFVPEHAEFHARNLG 297 (299)
T ss_dssp TTCTTHHHHTCTHHHHHHHTTSTTTTCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHTT
T ss_pred CCCcchhhhcCHHHHHHHHHhcCCCceEEEEeCCCCCCCHHH---HHHHHHHHHHHHHHhcC
Confidence 999886321 135688899888876 788899998997531 23456777888888875
No 273
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=99.37 E-value=1.6e-11 Score=125.89 Aligned_cols=215 Identities=15% Similarity=0.091 Sum_probs=130.9
Q ss_pred ceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECC--------CCCCCCChhhhhcC--
Q 004149 519 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNY--------RGSLGFGEEALQSL-- 588 (771)
Q Consensus 519 ~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~--------rG~~~~g~~~~~~~-- 588 (771)
..+.+.+|.|+ +.++.|+||.+||+.. ...+||+|+.+++ +|+.++|. +....
T Consensus 123 ~sf~~~i~lP~---g~~P~Pvii~~~~~~~-------------~~~~G~A~i~f~~~~va~d~~~gsrG~g~-f~~ly~~ 185 (433)
T 4g4g_A 123 ISFSASIRKPS---GAGPFPAIIGIGGASI-------------PIPSNVATITFNNDEFGAQMGSGSRGQGK-FYDLFGR 185 (433)
T ss_dssp EEEEEEEECCS---SSCCEEEEEEESCCCS-------------CCCTTSEEEEECHHHHSCCSSGGGTTCSH-HHHHHCT
T ss_pred EEEEEEEECCC---CCCCccEEEEECCCcc-------------ccCCCeEEEEeCCcccccccCCCcCCccc-cccccCC
Confidence 45789999997 4578999999997421 0357999999997 34445555 43221
Q ss_pred CCCccccc--hhhHHHHHHHHHH----cCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCccchhhhh-----
Q 004149 589 PGKVGSQD--VNDVLTAIDHVID----MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV----- 657 (771)
Q Consensus 589 ~~~~~~~~--~~D~~~~i~~l~~----~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~----- 657 (771)
...++... .-++.+++++|.. ++.+|++||+++|||+||..++++++.. ++|+++|..++.++-....
T Consensus 186 ~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D-~Ri~~vi~~~sg~~G~~~~R~~~~ 264 (433)
T 4g4g_A 186 DHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALV-DRIALTIPQESGAGGAACWRISDQ 264 (433)
T ss_dssp TCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEESCCTTTTSCHHHHHH
T ss_pred ccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcC-CceEEEEEecCCCCchhhhhhchh
Confidence 12333322 3588999999998 7889999999999999999999999985 5899999888754322111
Q ss_pred ----cCCC--------CCcchhhhhccCCCCCcCCCCCChhhHHHHhhcCccc---cccCC-CCcEEEEeeCCCCccCcH
Q 004149 658 ----GTTD--------IPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPIS---HISKV-KTPTIFLLGAQDLRVPVS 721 (771)
Q Consensus 658 ----~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~---~~~~i-~~P~Lii~G~~D~~vp~~ 721 (771)
+..- ...|+. .. ...|... ...-|+. .+.-+ ..|+|++.| +|..+++.
T Consensus 265 ~~~~Ge~v~~~~~~~ge~~Wf~-~~-----f~~y~~~---------~~~LPfD~heL~ALiAPRPlLv~~g-~D~w~~p~ 328 (433)
T 4g4g_A 265 QKAAGANIQTAAQIITENPWFS-RN-----FDPHVNS---------ITSVPQDHHLLAALIVPRGLAVFEN-NIDWLGPV 328 (433)
T ss_dssp HHHTTCCCCCHHHHTTTCCCSC-TT-----TGGGTTC---------GGGSSCCGGGHHHHHTTSEEEEEEC-CCTTTCHH
T ss_pred hcccCcchhhhhcccCCccccc-hh-----hHhhccc---------cccCCcCHHHHHHhhCCceEEEecC-CCCcCCcH
Confidence 1000 001110 00 0000000 0000111 11111 257999999 89888876
Q ss_pred HHHHHHHHH----HhCCC--CEEEEEeCCCCccCCCCCChHHHHHHHHHHHHHHhC
Q 004149 722 NGLQYARAL----REKGV--ETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 771 (771)
Q Consensus 722 ~~~~~~~~l----~~~g~--~~~~~~~~~~~H~~~~~~~~~~~~~~i~~wl~~~l~ 771 (771)
.....+..+ +..|. ++.+...++.+|+.. +. +....+.+||+++|+
T Consensus 329 g~~~a~~aa~~VY~~lGa~d~l~~~~~ggH~Hc~f-p~---~~r~~~~~F~~k~Lk 380 (433)
T 4g4g_A 329 STTGCMAAGRLIYKAYGVPNNMGFSLVGGHNHCQF-PS---SQNQDLNSYINYFLL 380 (433)
T ss_dssp HHHHHHHHHHHHHHHHTCGGGEEEEECCSSCTTCC-CG---GGHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCccceEEEeeCCCCcccC-CH---HHHHHHHHHHHHHhC
Confidence 555433333 22343 467765545456432 22 234788899999985
No 274
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=99.36 E-value=1.6e-12 Score=130.17 Aligned_cols=210 Identities=14% Similarity=0.076 Sum_probs=125.4
Q ss_pred cEEEEEcCCCCCCCCCcchHHHHHHHHCCcE---E----------EEECCCCCCCCChhhhh-c--CCCCccccchhhHH
Q 004149 538 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYS---L----------LIVNYRGSLGFGEEALQ-S--LPGKVGSQDVNDVL 601 (771)
Q Consensus 538 p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~---V----------~~~d~rG~~~~g~~~~~-~--~~~~~~~~~~~D~~ 601 (771)
+.|||+||.+.+ ...|...+..|+++++. | +.+|-++....+..... . ..........+++.
T Consensus 4 ~pvvllHG~~~~--~~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~ 81 (254)
T 3ds8_A 4 IPIILIHGSGGN--ASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLK 81 (254)
T ss_dssp CCEEEECCTTCC--TTTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHH
T ss_pred CCEEEECCCCCC--cchHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHH
Confidence 558899997665 45688899999988763 3 33332211100000000 0 00001112255666
Q ss_pred HHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCC-----ceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCC
Q 004149 602 TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD-----KFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 676 (771)
Q Consensus 602 ~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~-----~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 676 (771)
++++.+.++. +.+++.++||||||.+++.++.++|+ +++++|+.++..+......... .+.
T Consensus 82 ~~i~~l~~~~--~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~--------~~~---- 147 (254)
T 3ds8_A 82 IAMEDLKSRY--GFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNGM--------DLS---- 147 (254)
T ss_dssp HHHHHHHHHH--CCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHCS--------CTT----
T ss_pred HHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCccccccccc--------ccc----
Confidence 6677777763 33789999999999999999999988 8999999988654322111000 000
Q ss_pred CcCCCCCC-hhhHHHHhhcCccccccCCCCcEEEEeeC------CCCccCcHHHHHHHHHHHhCCCCEEEEEeCC--CCc
Q 004149 677 DSFTESPS-VEDLTRFHSKSPISHISKVKTPTIFLLGA------QDLRVPVSNGLQYARALREKGVETKVIVFPN--DVH 747 (771)
Q Consensus 677 ~~~~~~~~-~~~~~~~~~~sp~~~~~~i~~P~Lii~G~------~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~--~~H 747 (771)
+...+. ......+... ...+.+ ++|+|.|+|+ .|..||+..++.+...+.......+...+.+ ++|
T Consensus 148 --~~~~p~~~~~~~~~~~~--~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~H 222 (254)
T 3ds8_A 148 --FKKLPNSTPQMDYFIKN--QTEVSP-DLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVH 222 (254)
T ss_dssp --CSSCSSCCHHHHHHHHT--GGGSCT-TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCG
T ss_pred --cccCCcchHHHHHHHHH--HhhCCC-CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCch
Confidence 000111 1111111111 112222 6899999999 9999999998888777765434455556655 679
Q ss_pred cCCCCCChHHHHHHHHHHHHHHh
Q 004149 748 GIERPQSDFESFLNIGLWFKKYC 770 (771)
Q Consensus 748 ~~~~~~~~~~~~~~i~~wl~~~l 770 (771)
..... +. ++.+.+..||+++.
T Consensus 223 s~l~~-~~-~v~~~i~~fL~~~~ 243 (254)
T 3ds8_A 223 QTLHE-TP-KSIEKTYWFLEKFK 243 (254)
T ss_dssp GGGGG-SH-HHHHHHHHHHHTCC
T ss_pred hcccC-CH-HHHHHHHHHHHHhc
Confidence 76533 33 68899999998764
No 275
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=99.36 E-value=3.2e-12 Score=136.64 Aligned_cols=119 Identities=14% Similarity=0.098 Sum_probs=85.3
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHH------CCcEEEEECCCCCCCCChhhhhcCCC
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS------VGYSLLIVNYRGSLGFGEEALQSLPG 590 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~------~G~~V~~~d~rG~~~~g~~~~~~~~~ 590 (771)
+|..|+.....+. ....+.||++||.+++ ...|...+..|++ .||.|+++|+|| +|.+....
T Consensus 93 ~g~~i~~~~~~~~----~~~~~pllllHG~~~s--~~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG---~G~S~~~~--- 160 (408)
T 3g02_A 93 EGLTIHFAALFSE----REDAVPIALLHGWPGS--FVEFYPILQLFREEYTPETLPFHLVVPSLPG---YTFSSGPP--- 160 (408)
T ss_dssp TTEEEEEEEECCS----CTTCEEEEEECCSSCC--GGGGHHHHHHHHHHCCTTTCCEEEEEECCTT---STTSCCSC---
T ss_pred CCEEEEEEEecCC----CCCCCeEEEECCCCCc--HHHHHHHHHHHhcccccccCceEEEEECCCC---CCCCCCCC---
Confidence 6888988777654 2345779999998776 4568888888887 699999999999 44432211
Q ss_pred CccccchhhHHHHHHHHHHcCCCCCC-eEEEEEcChhHHHHHHHHHhCCCceeEEEecCC
Q 004149 591 KVGSQDVNDVLTAIDHVIDMGLANPS-KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNP 649 (771)
Q Consensus 591 ~~~~~~~~D~~~~i~~l~~~~~~d~~-ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p 649 (771)
.......+++.+.+..+.+.- +.+ +++++||||||.+++.+|.++|+++...+..++
T Consensus 161 ~~~~~~~~~~a~~~~~l~~~l--g~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~ 218 (408)
T 3g02_A 161 LDKDFGLMDNARVVDQLMKDL--GFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCN 218 (408)
T ss_dssp SSSCCCHHHHHHHHHHHHHHT--TCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHh--CCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCC
Confidence 011234666666666666652 344 899999999999999999999876666555444
No 276
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.36 E-value=3.9e-11 Score=126.37 Aligned_cols=299 Identities=10% Similarity=0.018 Sum_probs=162.0
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEE
Q 004149 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 128 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 128 (771)
.+|||+.|+... ..+.+.+|++............. .....+...+|||||++||..+... ...
T Consensus 24 ~sp~g~~las~~---------~D~~i~iw~~~~~~~~~~~~~~~---~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~ 86 (345)
T 3fm0_A 24 WNPAGTLLASCG---------GDRRIRIWGTEGDSWICKSVLSE---GHQRTVRKVAWSPCGNYLASASFDA-----TTC 86 (345)
T ss_dssp ECTTSSCEEEEE---------TTSCEEEEEEETTEEEEEEEECS---SCSSCEEEEEECTTSSEEEEEETTS-----CEE
T ss_pred ECCCCCEEEEEc---------CCCeEEEEEcCCCcceeeeeecc---ccCCcEEEEEECCCCCEEEEEECCC-----cEE
Confidence 467888777543 23456666664331101111111 1224588899999999998876543 344
Q ss_pred Ee--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCC---CCCccCCCCCCccc
Q 004149 129 LW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGG---SSDKDCNSWKGQGD 203 (771)
Q Consensus 129 ~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 203 (771)
+| ..+....+..+. +..+. +.+++|+|||+.|+..+.+...+ .|+....... .....+......+.
T Consensus 87 iw~~~~~~~~~~~~~~-~h~~~------v~~v~~sp~~~~l~s~s~D~~v~--iwd~~~~~~~~~~~~~~~h~~~v~~~~ 157 (345)
T 3fm0_A 87 IWKKNQDDFECVTTLE-GHENE------VKSVAWAPSGNLLATCSRDKSVW--VWEVDEEDEYECVSVLNSHTQDVKHVV 157 (345)
T ss_dssp EEEECCC-EEEEEEEC-CCSSC------EEEEEECTTSSEEEEEETTSCEE--EEEECTTSCEEEEEEECCCCSCEEEEE
T ss_pred EEEccCCCeEEEEEcc-CCCCC------ceEEEEeCCCCEEEEEECCCeEE--EEECCCCCCeEEEEEecCcCCCeEEEE
Confidence 55 222222222221 11112 26899999999999988766432 3332211110 11112333344567
Q ss_pred ccCCcCcccCCccCceEEEEEccCCcee---eccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCc
Q 004149 204 WEEDWGETYAGKRQPSLFVININSGEVQ---AVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 280 (771)
Q Consensus 204 ~~~d~g~~~~~~~~~~l~v~d~~~~~~~---~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~ 280 (771)
|.++....+++..+..|.+||+.+++.. .+ ......+..++|+|||+. |+..+. +.
T Consensus 158 ~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~--~~h~~~v~~l~~sp~g~~----l~s~s~---------------D~ 216 (345)
T 3fm0_A 158 WHPSQELLASASYDDTVKLYREEEDDWVCCATL--EGHESTVWSLAFDPSGQR----LASCSD---------------DR 216 (345)
T ss_dssp ECSSSSCEEEEETTSCEEEEEEETTEEEEEEEE--CCCSSCEEEEEECTTSSE----EEEEET---------------TS
T ss_pred ECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEe--cCCCCceEEEEECCCCCE----EEEEeC---------------CC
Confidence 8888666666777889999999887643 33 334456889999999997 777662 12
Q ss_pred eeEEEec--ccccchhhhhhhhcCCCCCCc-ceecCC-CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeec
Q 004149 281 ALYAVRV--SLYKSEASELELKESSSEDLP-VVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW 356 (771)
Q Consensus 281 ~l~~~d~--~~~~~~~~~~~~~~~~~~~~~-~~~lt~-~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~ 356 (771)
.|.++++ +... ..... ........ ...+.. +...+...+|+|+|..|+..+.+. .|.++++
T Consensus 217 ~v~iW~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~-----------~i~vw~~ 281 (345)
T 3fm0_A 217 TVRIWRQYLPGNE---QGVAC-SGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDD-----------AIRVFQE 281 (345)
T ss_dssp CEEEEEEECTTCT---TCCCC-C---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTS-----------CEEEEEE
T ss_pred eEEEeccccCCCC---cccee-eccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCC-----------eEEEEEe
Confidence 3444443 1000 00000 00000000 111222 344578899999999998877653 3667776
Q ss_pred CCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEE
Q 004149 357 PTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 419 (771)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d 419 (771)
.++......... ....... .+...+..++|+|++..++++.+.++...||.+.
T Consensus 282 ~~~~~~~~~~~~-~~~~~~~---------~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~ 334 (345)
T 3fm0_A 282 DPNSDPQQPTFS-LTAHLHQ---------AHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQ 334 (345)
T ss_dssp CTTSCTTSCCEE-EEEEETT---------SSSSCEEEEEECSSSTTEEEEEETTSCEEEEEEC
T ss_pred CCCCCcceeeEE-EEeeecc---------cccCcEeEeEEeCCCceEEEEcCCCCcEEEEEec
Confidence 554321110000 0000000 0112355788999987677888888888888654
No 277
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.35 E-value=2.5e-11 Score=131.58 Aligned_cols=259 Identities=9% Similarity=0.012 Sum_probs=151.4
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
..+..++|||||+++|-.+.+. ... + ++..+.+. +..+. ...++||||| ..+
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~-----TV~-d--~~~~~~l~---gh~~~------v~~V~FsPdg-------~~~---- 67 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDI-----SIG-Q--PKYAKDIN---CNSKN------LFHVKEFPLE-------FEN---- 67 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSE-----EEE-E--ECCCSCCS---SBGGG------TEEEEEECCC-------CCC----
T ss_pred ccEEEEEECCCCCEEEEEcCCc-----eee-c--ccccceec---CCCcc------EEEEEECCCC-------Ccc----
Confidence 4588899999999998764432 222 2 11111111 11112 2588999999 111
Q ss_pred CCccCCCCCCCCCCc-cCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCC-----ccceEEEecCCC
Q 004149 179 PTFSLGSTKGGSSDK-DCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSL-----SVGQVVWAPLNE 252 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~-----~~~~~~wspDg~ 252 (771)
.|............ .+..+.....|+||+....+......+.+||.++ ....+ . .+. .+..++|||||+
T Consensus 68 -~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l--~-~~~~~~~~sv~svafSPDG~ 142 (588)
T 2j04_A 68 -KLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNL--D-SKGNLSSRTYHCFEWNPIES 142 (588)
T ss_dssp -TTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-EEEEC--C-CSSCSTTTCEEEEEECSSSS
T ss_pred -eEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeec--c-CCCccccccEEEEEEcCCCC
Confidence 12111111111111 2245556778999977777777889999999655 33333 2 222 477999999999
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc--------eec----CCCCcccc
Q 004149 253 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--------VNL----TESISSAF 320 (771)
Q Consensus 253 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--------~~l----t~~~~~~~ 320 (771)
. |+..+ .++.|.++|+ .++.. ..+ ..+...+.
T Consensus 143 ~----LAsgs---------------~DGtVkIWd~-----------------~~~~l~~~~~i~l~ti~~~~~gh~~~V~ 186 (588)
T 2j04_A 143 S----IVVGN---------------EDGELQFFSI-----------------RKNSENTPEFYFESSIRLSDAGSKDWVT 186 (588)
T ss_dssp C----EEEEE---------------TTSEEEEEEC-----------------CCCTTTCCCCEEEEEEECSCTTCCCCEE
T ss_pred E----EEEEc---------------CCCEEEEEEC-----------------CCCccccccceeeeeeecccccccccEE
Confidence 8 88876 3447778887 44432 333 33445689
Q ss_pred ceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCC
Q 004149 321 FPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDG 400 (771)
Q Consensus 321 ~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg 400 (771)
+.+||||| |+..+.+ ..+++||+.++....+... +. ..+...+..++|+ |
T Consensus 187 sVawSPdg--Laass~D-----------~tVrlWd~~~~~~~~~~~t-------L~--------~~h~~~V~svaFs--g 236 (588)
T 2j04_A 187 HIVWYEDV--LVAALSN-----------NSVFSMTVSASSHQPVSRM-------IQ--------NASRRKITDLKIV--D 236 (588)
T ss_dssp EEEEETTE--EEEEETT-----------CCEEEECCCSSSSCCCEEE-------EE--------CCCSSCCCCEEEE--T
T ss_pred EEEEcCCc--EEEEeCC-----------CeEEEEECCCCccccceee-------ec--------ccccCcEEEEEEE--C
Confidence 99999999 6555544 3488889877663210000 00 0011246788899 4
Q ss_pred CEEEEEeeeCCeeEEEEEECCCCcEEEec-CCCCCceeeEE--eecCCEEEEEEeCCCCCCeEEEE
Q 004149 401 CTMLLSSIWGSSQVIISVNVSSGELLRIT-PAESNFSWSLL--TLDGDNIIAVSSSPVDVPQVKYG 463 (771)
Q Consensus 401 ~~l~~~~~~~~~~~l~~~d~~tg~~~~l~-~~~~~~~~~~~--s~d~~~l~~~~s~~~~p~~l~~~ 463 (771)
+.|+.+ . . ..+..+++.+++...+. .....+....| ++|+..++.+..+.. .++..
T Consensus 237 ~~LASa-~-~--~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~---klw~~ 295 (588)
T 2j04_A 237 YKVVLT-C-P--GYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY---KVLLE 295 (588)
T ss_dssp TEEEEE-C-S--SEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE---EEEES
T ss_pred CEEEEE-e-C--CeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC---EEEee
Confidence 655443 3 3 35666688888885554 44445666788 888865544443322 56654
No 278
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.35 E-value=4e-11 Score=124.70 Aligned_cols=243 Identities=11% Similarity=0.117 Sum_probs=141.3
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
..+...+|||||++|+..+... .+.+|+ .++..+.+... .+. +.++.|+|+++.|+..+.+...
T Consensus 66 ~~v~~~~~s~dg~~l~s~s~D~-----~v~~wd~~~~~~~~~~~~h---~~~------v~~~~~~~~~~~l~s~s~D~~i 131 (319)
T 3frx_A 66 HIVQDCTLTADGAYALSASWDK-----TLRLWDVATGETYQRFVGH---KSD------VMSVDIDKKASMIISGSRDKTI 131 (319)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEECC---SSC------EEEEEECTTSCEEEEEETTSCE
T ss_pred ccEEEEEECCCCCEEEEEeCCC-----EEEEEECCCCCeeEEEccC---CCc------EEEEEEcCCCCEEEEEeCCCeE
Confidence 5578899999999998776544 566773 33332222211 111 2689999999999988877644
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCC------cCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecC
Q 004149 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEED------WGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPL 250 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspD 250 (771)
+ .|+.. .........+..+.....+.+. ....+++.....|.+||+.+++..... ......+..++|+||
T Consensus 132 ~--vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~sp~ 207 (319)
T 3frx_A 132 K--VWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADF-IGHNSNINTLTASPD 207 (319)
T ss_dssp E--EEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEE-CCCCSCEEEEEECTT
T ss_pred E--EEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheee-cCCCCcEEEEEEcCC
Confidence 3 33321 1111111122233333344442 123445556788999999887754431 344556888999999
Q ss_pred CCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCE
Q 004149 251 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKF 330 (771)
Q Consensus 251 g~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~ 330 (771)
|+. |+..+ .+..|.++|+ .+++..........+...+|||||..
T Consensus 208 g~~----l~s~~---------------~dg~i~iwd~-----------------~~~~~~~~~~~~~~v~~~~~sp~~~~ 251 (319)
T 3frx_A 208 GTL----IASAG---------------KDGEIMLWNL-----------------AAKKAMYTLSAQDEVFSLAFSPNRYW 251 (319)
T ss_dssp SSE----EEEEE---------------TTCEEEEEET-----------------TTTEEEEEEECCSCEEEEEECSSSSE
T ss_pred CCE----EEEEe---------------CCCeEEEEEC-----------------CCCcEEEEecCCCcEEEEEEcCCCCE
Confidence 997 77665 3347888888 55543322233456888999999998
Q ss_pred EEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeC
Q 004149 331 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG 410 (771)
Q Consensus 331 l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~ 410 (771)
|+..... .+.++++.++... ..+.... ..+.......+..++|||||+.| ++...+
T Consensus 252 la~~~~~------------~i~v~~~~~~~~~----------~~~~~~~-~~~~~~~~~~v~~~~~spdg~~l-~sg~~D 307 (319)
T 3frx_A 252 LAAATAT------------GIKVFSLDPQYLV----------DDLRPEF-AGYSKAAEPHAVSLAWSADGQTL-FAGYTD 307 (319)
T ss_dssp EEEEETT------------EEEEEEETTEEEE----------EEECCCC-TTCCGGGCCCEEEEEECTTSSEE-EEEETT
T ss_pred EEEEcCC------------CcEEEEeCcCeee----------eccCccc-cccccCcCcceeEEEECCCCCEE-EEeecC
Confidence 8765532 2566666543211 0000000 00000011123467899999966 455667
Q ss_pred CeeEEEEEE
Q 004149 411 SSQVIISVN 419 (771)
Q Consensus 411 ~~~~l~~~d 419 (771)
+...||.+.
T Consensus 308 g~i~vWd~~ 316 (319)
T 3frx_A 308 NVIRVWQVM 316 (319)
T ss_dssp SCEEEEEEE
T ss_pred ceEEEEEEe
Confidence 777777654
No 279
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.35 E-value=3.4e-11 Score=126.67 Aligned_cols=262 Identities=8% Similarity=0.035 Sum_probs=145.5
Q ss_pred EEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCC--cccccccCCCcccceeecCCCCeEEEEecCCCCCCC
Q 004149 103 AVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQ--TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 179 (771)
Q Consensus 103 ~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 179 (771)
.++++++++.++.... ...++.++ ..++..+.+.... .. ..+.|||||+.+++...
T Consensus 4 g~~~~~~~~~~v~~~~----~~~v~~~d~~~~~~~~~~~~~~~~~~----------~~~~~s~dg~~~~v~~~------- 62 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNY----PNNLHVVDVASDTVYKSCVMPDKFGP----------GTAMMAPDNRTAYVLNN------- 62 (349)
T ss_dssp CCCCCTTCEEEEEEET----TTEEEEEETTTTEEEEEEECSSCCSS----------CEEEECTTSSEEEEEET-------
T ss_pred cccccCCCEEEEEeCC----CCeEEEEECCCCcEEEEEecCCCCCC----------ceeEECCCCCEEEEEeC-------
Confidence 3567887776554433 23566666 4555555555433 23 48899999987766532
Q ss_pred CccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCC-----CCccceEEEecCCCCC
Q 004149 180 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK-----SLSVGQVVWAPLNEGL 254 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~-----~~~~~~~~wspDg~~~ 254 (771)
....|++||+.+++......... ...+..++|||||+.
T Consensus 63 ------------------------------------~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~- 105 (349)
T 1jmx_B 63 ------------------------------------HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKE- 105 (349)
T ss_dssp ------------------------------------TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSE-
T ss_pred ------------------------------------CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCE-
Confidence 23689999999887654311121 123678899999997
Q ss_pred ccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCccee---cCCCCccccceeecCCCCEE
Q 004149 255 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVN---LTESISSAFFPRFSPDGKFL 331 (771)
Q Consensus 255 ~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---lt~~~~~~~~p~~SpDG~~l 331 (771)
|++........+. .+ ......|+++|+ .+++... .......+....|||||+ |
T Consensus 106 ---l~~~~~~~~~~~~--~~-~~~~~~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l 161 (349)
T 1jmx_B 106 ---VYATVNPTQRLND--HY-VVKPPRLEVFST-----------------ADGLEAKPVRTFPMPRQVYLMRAADDGS-L 161 (349)
T ss_dssp ---EEEEEEEEEECSS--CE-EECCCEEEEEEG-----------------GGGGGBCCSEEEECCSSCCCEEECTTSC-E
T ss_pred ---EEEEccccccccc--cc-ccCCCeEEEEEC-----------------CCccccceeeeccCCCcccceeECCCCc-E
Confidence 7776632100000 00 011348999998 4433221 112223456677999999 5
Q ss_pred EEEecCCCCCCCCccccccceeeecCCCCCCCCcc-cee------------------------eEEecccccC-------
Q 004149 332 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE-KIV------------------------DVIPVVQCAE------- 379 (771)
Q Consensus 332 ~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~-~~~------------------------~~~~~~~~~~------- 379 (771)
++.+ ..|+++|+.+++...... ... ....+...+.
T Consensus 162 ~~~~-------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 228 (349)
T 1jmx_B 162 YVAG-------------PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT 228 (349)
T ss_dssp EEES-------------SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC
T ss_pred EEcc-------------CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccc
Confidence 5521 128888887765422110 000 0000000000
Q ss_pred -------------CCCCcc----cccCCCCCCcccc-CCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEe
Q 004149 380 -------------GDCFPG----LYSSSILSNPWLS-DGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLT 441 (771)
Q Consensus 380 -------------~~~f~g----~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s 441 (771)
.+...- -.......++|+| ||+.|++. ...|+.+|+.+++...............++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s 303 (349)
T 1jmx_B 229 ADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-----LNRLAKYDLKQRKLIKAANLDHTYYCVAFD 303 (349)
T ss_dssp CEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-----ESEEEEEETTTTEEEEEEECSSCCCEEEEC
T ss_pred cccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-----cCeEEEEECccCeEEEEEcCCCCccceEEC
Confidence 000000 0000123557889 99987766 347899999999876554333334567899
Q ss_pred ecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 442 LDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 442 ~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
+|++.|++. +. -..|.+.+..+.
T Consensus 304 ~dg~~l~~~--~~--~~~v~v~d~~~~ 326 (349)
T 1jmx_B 304 KKGDKLYLG--GT--FNDLAVFNPDTL 326 (349)
T ss_dssp SSSSCEEEE--SB--SSEEEEEETTTT
T ss_pred CCCCEEEEe--cC--CCeEEEEecccc
Confidence 999988773 22 267888776543
No 280
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.34 E-value=2.2e-11 Score=125.68 Aligned_cols=262 Identities=11% Similarity=0.056 Sum_probs=158.3
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
..+...+|||||+.||.....+ .+.+|+ .+...+....... ......|+|||+.|+..+.+...
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg-----~v~lWd~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSG-----RVELWNYETQVEVRSIQVTET---------PVRAGKFIARKNWIIVGSDDFRI 79 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----EEEEEETTTTEEEEEEECCSS---------CEEEEEEEGGGTEEEEEETTSEE
T ss_pred CceEEEEECCCCCEEEEEcCCC-----cEEEEECCCCceeEEeeccCC---------cEEEEEEeCCCCEEEEECCCCEE
Confidence 4588999999999998776543 566773 2333333322111 12588999999999988876543
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCc-eeeccCCCCCCccceEEEecC-CCCC
Q 004149 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE-VQAVKGIPKSLSVGQVVWAPL-NEGL 254 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~-~~~l~~~~~~~~~~~~~wspD-g~~~ 254 (771)
+ .|+............+........|.++....+++..+..|.+||+.++. ..... ......+..++|+|+ +..
T Consensus 80 ~--vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~- 155 (304)
T 2ynn_A 80 R--VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF-EGHEHFVMCVAFNPKDPST- 155 (304)
T ss_dssp E--EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEE-CCCCSCEEEEEECTTCTTE-
T ss_pred E--EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhh-cccCCcEEEEEECCCCCCE-
Confidence 3 34433222222233345555667788887667777788999999998873 33321 334456788999995 454
Q ss_pred ccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC-cceecC-CCCccccceeecC--CCCE
Q 004149 255 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLT-ESISSAFFPRFSP--DGKF 330 (771)
Q Consensus 255 ~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~lt-~~~~~~~~p~~Sp--DG~~ 330 (771)
|+..+ .+..|.++|+ ..+ ....+. .....+....|+| |++.
T Consensus 156 ---l~sgs---------------~D~~v~iwd~-----------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 200 (304)
T 2ynn_A 156 ---FASGC---------------LDRTVKVWSL-----------------GQSTPNFTLTTGQERGVNYVDYYPLPDKPY 200 (304)
T ss_dssp ---EEEEE---------------TTSEEEEEET-----------------TCSSCSEEEECCCTTCEEEEEECCSTTCCE
T ss_pred ---EEEEe---------------CCCeEEEEEC-----------------CCCCccceeccCCcCcEEEEEEEEcCCCCE
Confidence 44443 2336888887 332 222332 2334456667765 7788
Q ss_pred EEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeC
Q 004149 331 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG 410 (771)
Q Consensus 331 l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~ 410 (771)
|+..+.+ ..|.+||+.+++......+ +...+...+|+|+++. +++...+
T Consensus 201 l~s~s~D-----------~~i~iWd~~~~~~~~~~~~-------------------h~~~v~~~~~~p~~~~-l~s~s~D 249 (304)
T 2ynn_A 201 MITASDD-----------LTIKIWDYQTKSCVATLEG-------------------HMSNVSFAVFHPTLPI-IISGSED 249 (304)
T ss_dssp EEEEETT-----------SEEEEEETTTTEEEEEEEC-------------------CSSCEEEEEECSSSSE-EEEEETT
T ss_pred EEEEcCC-----------CeEEEEeCCCCccceeeCC-------------------CCCCEEEEEECCCCCE-EEEEcCC
Confidence 8776654 3588999877543211100 0112445789999984 4566667
Q ss_pred CeeEEEEEECCCCcEEEecCCC-CCceeeEEeecCCE
Q 004149 411 SSQVIISVNVSSGELLRITPAE-SNFSWSLLTLDGDN 446 (771)
Q Consensus 411 ~~~~l~~~d~~tg~~~~l~~~~-~~~~~~~~s~d~~~ 446 (771)
+...|| |+.+++..+..... .......++|+++.
T Consensus 250 g~i~iW--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (304)
T 2ynn_A 250 GTLKIW--NSSTYKVEKTLNVGLERSWCIATHPTGRK 284 (304)
T ss_dssp SCEEEE--ETTTCCEEEEECCSSSSEEEEEECTTCGG
T ss_pred CeEEEE--ECCCCceeeeccCCCccEEEEEECCCCCc
Confidence 666665 78788766544332 23333455666654
No 281
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A
Probab=99.34 E-value=2e-12 Score=133.27 Aligned_cols=209 Identities=12% Similarity=0.068 Sum_probs=124.0
Q ss_pred CCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHH-HHHHcC
Q 004149 533 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAID-HVIDMG 611 (771)
Q Consensus 533 ~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~-~l~~~~ 611 (771)
..+..|.||++||.+.......|...+..|. .+|.|+++|+|| +|.+.. ....++++.+.+. .+.+.
T Consensus 63 ~~~~~~~lvllhG~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~G---~G~s~~-------~~~~~~~~a~~~~~~l~~~- 130 (300)
T 1kez_A 63 DGPGEVTVICCAGTAAISGPHEFTRLAGALR-GIAPVRAVPQPG---YEEGEP-------LPSSMAAVAAVQADAVIRT- 130 (300)
T ss_dssp CCSCSSEEEECCCSSTTCSTTTTHHHHHHTS-SSCCBCCCCCTT---SSTTCC-------BCSSHHHHHHHHHHHHHHH-
T ss_pred CCCCCCeEEEECCCcccCcHHHHHHHHHhcC-CCceEEEecCCC---CCCCCC-------CCCCHHHHHHHHHHHHHHh-
Confidence 3445689999999776532256777777774 469999999999 444311 1123455444433 44443
Q ss_pred CCCCCeEEEEEcChhHHHHHHHHHhCC---CceeEEEecCCccchhhhhcCCCCCcch--hhhhccCCCCCcCCCCCChh
Q 004149 612 LANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPLCNLALMVGTTDIPDWC--YVESYGSKGKDSFTESPSVE 686 (771)
Q Consensus 612 ~~d~~ri~l~G~S~GG~~a~~~a~~~p---~~~~a~v~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 686 (771)
.+.+++.|+|||+||.+++.++.++| ++++++|+.++........ ...+. ....+.. .........
T Consensus 131 -~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~ 201 (300)
T 1kez_A 131 -QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDA----MNAWLEELTATLFD----RETVRMDDT 201 (300)
T ss_dssp -CSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHH----HHHHHHHHHGGGCC----CCSSCCCHH
T ss_pred -cCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhH----HHHHHHHHHHHHHh----CcCCccchH
Confidence 24568999999999999999999987 4899999988764321100 00000 0000000 000000001
Q ss_pred ---hHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhC-CCCEEEEEeCCCCccCCCCCChHHHHHHH
Q 004149 687 ---DLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREK-GVETKVIVFPNDVHGIERPQSDFESFLNI 762 (771)
Q Consensus 687 ---~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~-g~~~~~~~~~~~~H~~~~~~~~~~~~~~i 762 (771)
....+..........++++|+|+++|+ |..+++.. .. +... ...++++++++ +|.....+....+...|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~i~~P~lii~G~-d~~~~~~~-~~----~~~~~~~~~~~~~i~g-gH~~~~~e~~~~~~~~i 274 (300)
T 1kez_A 202 RLTALGAYDRLTGQWRPRETGLPTLLVSAG-EPMGPWPD-DS----WKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHI 274 (300)
T ss_dssp HHHHHHHHHHHTTTCCCCCCSCCBEEEEES-SCSSCCCS-SC----CSCCCSSCCEEEEESS-CTTTSSSSCSHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCEEEEEeC-CCCCCCcc-cc----hhhhcCCCCeEEEecC-CChhhccccHHHHHHHH
Confidence 111111111112346789999999995 66666554 22 2222 22478999999 99876435566888999
Q ss_pred HHHHHHH
Q 004149 763 GLWFKKY 769 (771)
Q Consensus 763 ~~wl~~~ 769 (771)
.+||++.
T Consensus 275 ~~fl~~~ 281 (300)
T 1kez_A 275 DAWLGGG 281 (300)
T ss_dssp HHHHTCC
T ss_pred HHHHHhc
Confidence 9998754
No 282
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.34 E-value=3.5e-11 Score=149.45 Aligned_cols=235 Identities=12% Similarity=0.044 Sum_probs=154.9
Q ss_pred cccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeec
Q 004149 154 WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV 233 (771)
Q Consensus 154 ~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l 233 (771)
...+++|||||+.|++........ .|+............+........|+++....+++.....|.+||+.+++...+
T Consensus 963 ~i~~~~~sp~g~~l~~g~~~g~i~--i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~ 1040 (1249)
T 3sfz_A 963 QVSCCCLSPHLEYVAFGDEDGAIK--IIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFL 1040 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCE--EEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECC
T ss_pred cEEEEEEcCCCCEEEEEcCCCCEE--EEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEE
Confidence 446889999999999987665432 233222222222233445556778899876677777788999999999988776
Q ss_pred cCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceec
Q 004149 234 KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNL 312 (771)
Q Consensus 234 ~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~l 312 (771)
......+..+.|+||++ ++..+ ....|.++|+ .+++ ...+
T Consensus 1041 --~~~~~~v~~~~~~~~~~-----l~~~~---------------~dg~v~vwd~-----------------~~~~~~~~~ 1081 (1249)
T 3sfz_A 1041 --QAHQETVKDFRLLQDSR-----LLSWS---------------FDGTVKVWNV-----------------ITGRIERDF 1081 (1249)
T ss_dssp --BCCSSCEEEEEECSSSE-----EEEEE---------------SSSEEEEEET-----------------TTTCCCEEE
T ss_pred --ecCCCcEEEEEEcCCCc-----EEEEE---------------CCCcEEEEEC-----------------CCCceeEEE
Confidence 45556788899999876 55444 2347888998 4444 4566
Q ss_pred CCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCC
Q 004149 313 TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSIL 392 (771)
Q Consensus 313 t~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~ 392 (771)
..+...+....|||||+.|+..+.+. .|.+||+.++......... ...+.
T Consensus 1082 ~~~~~~v~~~~~s~d~~~l~s~s~d~-----------~v~iwd~~~~~~~~~l~~h-------------------~~~v~ 1131 (1249)
T 3sfz_A 1082 TCHQGTVLSCAISSDATKFSSTSADK-----------TAKIWSFDLLSPLHELKGH-------------------NGCVR 1131 (1249)
T ss_dssp ECCSSCCCCEEECSSSSSCEEECCSS-----------CCCEECSSSSSCSBCCCCC-------------------SSCEE
T ss_pred cccCCcEEEEEECCCCCEEEEEcCCC-----------cEEEEECCCcceeeeeccC-------------------CCcEE
Confidence 66777789999999999998877653 4888888776543221111 11245
Q ss_pred CCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec----------CCCCCceeeEEeecCCEEEEEEeCCCCCCeEEE
Q 004149 393 SNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT----------PAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKY 462 (771)
Q Consensus 393 ~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~----------~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~ 462 (771)
.++|||||+.|+ +...++...+| |+.+++..... .....+....|++|++.++... ..+.+
T Consensus 1132 ~~~~s~dg~~la-t~~~dg~i~vw--d~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~------g~v~v 1202 (1249)
T 3sfz_A 1132 CSAFSLDGILLA-TGDDNGEIRIW--NVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG------GYLKW 1202 (1249)
T ss_dssp EEEECSSSSEEE-EEETTSCCCEE--ESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES------SSEEE
T ss_pred EEEECCCCCEEE-EEeCCCEEEEE--ECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC------CeEEE
Confidence 678999998664 44555554555 77777644321 2223456678999999886542 35777
Q ss_pred EEeccc
Q 004149 463 GYFVDK 468 (771)
Q Consensus 463 ~~~~~~ 468 (771)
.++.++
T Consensus 1203 wd~~~g 1208 (1249)
T 3sfz_A 1203 WNVATG 1208 (1249)
T ss_dssp BCSSSC
T ss_pred EECCCC
Confidence 666544
No 283
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.34 E-value=1.6e-11 Score=132.60 Aligned_cols=269 Identities=11% Similarity=0.062 Sum_probs=161.0
Q ss_pred hhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCc
Q 004149 65 LLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQT 144 (771)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (771)
+......+.+.+|++.... ....+.. ....+...+|+|+|+.|+..+... .+.+|+-.....+..+. +
T Consensus 123 l~s~s~Dg~i~vwd~~~~~-~~~~l~~-----h~~~V~~v~~~~~~~~l~sgs~D~-----~i~iwd~~~~~~~~~~~-~ 190 (410)
T 1vyh_C 123 MVSASEDATIKVWDYETGD-FERTLKG-----HTDSVQDISFDHSGKLLASCSADM-----TIKLWDFQGFECIRTMH-G 190 (410)
T ss_dssp EEEEESSSCEEEEETTTCC-CCEEECC-----CSSCEEEEEECTTSSEEEEEETTS-----CCCEEETTSSCEEECCC-C
T ss_pred EEEEeCCCeEEEEECCCCc-EEEEEec-----cCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCceeEEEc-C
Confidence 3344455677787764332 1222221 225688899999999888765543 34445221112222221 1
Q ss_pred ccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEE
Q 004149 145 VHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVIN 224 (771)
Q Consensus 145 ~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d 224 (771)
..+ .+.++.|+|||+.|+..+.+...+ .|+............+..+.....+.++....+++..+..|.+||
T Consensus 191 h~~------~V~~v~~~p~~~~l~s~s~D~~i~--~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd 262 (410)
T 1vyh_C 191 HDH------NVSSVSIMPNGDHIVSASRDKTIK--MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262 (410)
T ss_dssp CSS------CEEEEEECSSSSEEEEEETTSEEE--EEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCC------CEEEEEEeCCCCEEEEEeCCCeEE--EEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 111 236899999999998887665432 343322222222333445555566777765566667788999999
Q ss_pred ccCCceeeccCCCCCCccceEEEecCCCCC----------------ccEEEEEeecCcceeeeeeeeccCCceeEEEecc
Q 004149 225 INSGEVQAVKGIPKSLSVGQVVWAPLNEGL----------------HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVS 288 (771)
Q Consensus 225 ~~~~~~~~l~~~~~~~~~~~~~wspDg~~~----------------~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~ 288 (771)
+.+++..... ......+..+.|+|++... +.+|+..+ .+..|.++|+
T Consensus 263 ~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs---------------~D~~i~iwd~- 325 (410)
T 1vyh_C 263 VATKECKAEL-REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS---------------RDKTIKMWDV- 325 (410)
T ss_dssp TTTCCEEEEE-CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE---------------TTSEEEEEET-
T ss_pred CCCCceeeEe-cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe---------------CCCeEEEEEC-
Confidence 9888765431 3444567888999974210 00033333 3447889998
Q ss_pred cccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccc
Q 004149 289 LYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK 367 (771)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~ 367 (771)
.++. ...+..+...+....|+|+|++|+..+.+ ..|.+||+.+++.......
T Consensus 326 ----------------~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D-----------~~i~vwd~~~~~~~~~~~~ 378 (410)
T 1vyh_C 326 ----------------STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADD-----------KTLRVWDYKNKRCMKTLNA 378 (410)
T ss_dssp ----------------TTTEEEEEEECCSSCEEEEEECSSSSCEEEEETT-----------TEEEEECCTTSCCCEEEEC
T ss_pred ----------------CCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCC-----------CeEEEEECCCCceEEEEcC
Confidence 4444 45566667778899999999998876654 3588999876553211110
Q ss_pred eeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEE
Q 004149 368 IVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 417 (771)
Q Consensus 368 ~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~ 417 (771)
+...+..++|+|++..| ++.+.++...+|.
T Consensus 379 -------------------h~~~v~~l~~~~~~~~l-~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 379 -------------------HEHFVTSLDFHKTAPYV-VTGSVDQTVKVWE 408 (410)
T ss_dssp -------------------CSSCEEEEEECSSSSCE-EEEETTSEEEEEC
T ss_pred -------------------CCCcEEEEEEcCCCCEE-EEEeCCCcEEEEe
Confidence 11124567899999855 5666777777774
No 284
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Probab=99.33 E-value=2.2e-12 Score=131.85 Aligned_cols=148 Identities=14% Similarity=0.109 Sum_probs=98.8
Q ss_pred CCCCCCeEEEEEcChhHHHHHHHHHhCCCcee-EEEecCCccchhhhhcCCCCCcchhhhhccCCCCCcCCCCCChhhHH
Q 004149 611 GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFV-AAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLT 689 (771)
Q Consensus 611 ~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~-a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (771)
..+|++||+|+|+|+||++++.++..+|++|+ ++++.++...... .+.. ....+.. .+......+...
T Consensus 6 ~~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~----~~~~---~~~~~~~----~~~~~~~~~~~~ 74 (318)
T 2d81_A 6 FNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCA----RNQY---YTSCMYN----GYPSITTPTANM 74 (318)
T ss_dssp CCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTT----SSSC---GGGGSTT----CCCCCHHHHHHH
T ss_pred cCcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEeccccccc----chHH---HHHHhhc----cCCCCCCHHHHH
Confidence 34889999999999999999999999999998 8776665321100 0000 0000000 000001112222
Q ss_pred HHhhcCccccccCCC-CcEEEEeeCCCCccCcHHHHHHHHHHHhCCC--CEEEEEeCCCCccCCCCCC------------
Q 004149 690 RFHSKSPISHISKVK-TPTIFLLGAQDLRVPVSNGLQYARALREKGV--ETKVIVFPNDVHGIERPQS------------ 754 (771)
Q Consensus 690 ~~~~~sp~~~~~~i~-~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~--~~~~~~~~~~~H~~~~~~~------------ 754 (771)
.....+++..+.+++ +|+||+||+.|.+||++++++++++|++.+. +++++.+++++|.+.....
T Consensus 75 ~~~~~~~i~~~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~ 154 (318)
T 2d81_A 75 KSWSGNQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTS 154 (318)
T ss_dssp HHHBTTTBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCT
T ss_pred HHhhcccCChhHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccccCCC
Confidence 222224555555554 6899999999999999999999999998874 7999999999998653221
Q ss_pred ------hHHHHHHHHHHHHHH
Q 004149 755 ------DFESFLNIGLWFKKY 769 (771)
Q Consensus 755 ------~~~~~~~i~~wl~~~ 769 (771)
..+....|++||...
T Consensus 155 pyi~~~~~d~~~~i~~ff~g~ 175 (318)
T 2d81_A 155 PYISNCNYDGAGAALKWIYGS 175 (318)
T ss_dssp TCEEECSSCHHHHHHHHHHSS
T ss_pred CcccCCCChHHHHHHHHHhcc
Confidence 246677899998643
No 285
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.33 E-value=1.9e-11 Score=128.50 Aligned_cols=260 Identities=9% Similarity=0.035 Sum_probs=151.6
Q ss_pred cceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CC-cceEEEecCCcc
Q 004149 69 KRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QS-QLEKEFHVPQTV 145 (771)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~ 145 (771)
...+.+.+|++.... ....+... ...+...+|||+|+.||.....+ ...+|+ .+ ...++...-.+.
T Consensus 74 s~Dg~v~iWd~~~~~-~~~~~~~~-----~~~v~~~~~s~~~~~l~s~~~d~-----~v~iw~~~~~~~~~~~~~~~~~h 142 (340)
T 1got_B 74 SQDGKLIIWDSYTTN-KVHAIPLR-----SSWVMTCAYAPSGNYVACGGLDN-----ICSIYNLKTREGNVRVSRELAGH 142 (340)
T ss_dssp ETTTEEEEEETTTCC-EEEEEECS-----SSCEEEEEECTTSSEEEEEETTC-----EEEEEETTTCSBSCEEEEEEECC
T ss_pred eCCCcEEEEECCCCC-cceEeecC-----CccEEEEEECCCCCEEEEEeCCC-----eEEEEECccCCCcceeEEEecCC
Confidence 344577777763321 12222211 24578899999999998776543 455552 11 111221111111
Q ss_pred cccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEc
Q 004149 146 HGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI 225 (771)
Q Consensus 146 ~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~ 225 (771)
.+ .+..+.|+||++ |+..+.+...+ .|+............+........|.++....+++..+..|.+||+
T Consensus 143 ~~------~v~~~~~~~~~~-l~s~s~d~~i~--~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~ 213 (340)
T 1got_B 143 TG------YLSCCRFLDDNQ-IVTSSGDTTCA--LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213 (340)
T ss_dssp SS------CEEEEEEEETTE-EEEEETTSCEE--EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred Cc------cEEEEEECCCCc-EEEEECCCcEE--EEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 11 226788999986 66665554322 3433222211222223334456678888655666777889999999
Q ss_pred cCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCC
Q 004149 226 NSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE 305 (771)
Q Consensus 226 ~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 305 (771)
.+++..... ......+..++|+|||+. |+..+ .+..|.++|+ .
T Consensus 214 ~~~~~~~~~-~~h~~~v~~v~~~p~~~~----l~s~s---------------~d~~v~iwd~-----------------~ 256 (340)
T 1got_B 214 REGMCRQTF-TGHESDINAICFFPNGNA----FATGS---------------DDATCRLFDL-----------------R 256 (340)
T ss_dssp TTCSEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------TTSCEEEEET-----------------T
T ss_pred CCCeeEEEE-cCCcCCEEEEEEcCCCCE----EEEEc---------------CCCcEEEEEC-----------------C
Confidence 888765441 334556889999999997 77655 3346888887 4
Q ss_pred CCcc-eecCCC--CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCC
Q 004149 306 DLPV-VNLTES--ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDC 382 (771)
Q Consensus 306 ~~~~-~~lt~~--~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (771)
.++. ..+... ...+.+..|||||+.|+..+.+ ..|.+||+.++.......+
T Consensus 257 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-----------~~i~vwd~~~~~~~~~~~~--------------- 310 (340)
T 1got_B 257 ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD-----------FNCNVWDALKADRAGVLAG--------------- 310 (340)
T ss_dssp TTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-----------SEEEEEETTTCCEEEEEEC---------------
T ss_pred CCcEEEEEccCCcccceEEEEECCCCCEEEEECCC-----------CeEEEEEcccCcEeeEeec---------------
Confidence 4332 233222 2347889999999988876654 3588999876543111000
Q ss_pred CcccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 004149 383 FPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 416 (771)
Q Consensus 383 f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~ 416 (771)
+...+..++|+|||+.| ++.+.++...||
T Consensus 311 ----h~~~v~~~~~s~dg~~l-~s~s~D~~i~iW 339 (340)
T 1got_B 311 ----HDNRVSCLGVTDDGMAV-ATGSWDSFLKIW 339 (340)
T ss_dssp ----CSSCEEEEEECTTSSCE-EEEETTSCEEEE
T ss_pred ----CCCcEEEEEEcCCCCEE-EEEcCCccEEec
Confidence 11134567899999855 566667777776
No 286
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.33 E-value=3.2e-11 Score=127.17 Aligned_cols=291 Identities=12% Similarity=0.043 Sum_probs=169.6
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEec--CCcccccccCCCcccceeecCC---CCeEEEEe
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHV--PQTVHGSVYADGWFEGISWNSD---ETLIAYVA 171 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~wSpD---g~~la~~~ 171 (771)
..+...+|||+|+.++...... .....+.+| ..++...+... ...+ .+++|+|+ |+.|+..+
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~-~~d~~v~iw~~~~~~~~~~~~~~~~~~v----------~~~~~~~~~~~~~~l~~~~ 87 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFA-RGTGVIQLYEIQHGDLKLLREIEKAKPI----------KCGTFGATSLQQRYLATGD 87 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC---CCCEEEEEEEECSSSEEEEEEEEESSCE----------EEEECTTCCTTTCCEEEEE
T ss_pred CceEEEEEcCCCceEEEecCcc-CCCcEEEEEeCCCCcccceeeecccCcE----------EEEEEcCCCCCCceEEEec
Confidence 4588999999998887765431 112244455 33333333322 2222 68999999 68888877
Q ss_pred cCCCCCCCCccCCCCC-CCCCCccCCCCCCcc------cccCCcCcccCCccCceEEEEEccCCc--eeeccCCCC--CC
Q 004149 172 EEPSPSKPTFSLGSTK-GGSSDKDCNSWKGQG------DWEEDWGETYAGKRQPSLFVININSGE--VQAVKGIPK--SL 240 (771)
Q Consensus 172 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~~~~d~g~~~~~~~~~~l~v~d~~~~~--~~~l~~~~~--~~ 240 (771)
.+.... .|+..... .......+....... .|+++....+++.....|.+||+.+++ ...+..... ..
T Consensus 88 ~dg~i~--iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 165 (357)
T 3i2n_A 88 FGGNLH--IWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKR 165 (357)
T ss_dssp TTSCEE--EECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCC
T ss_pred CCCeEE--EEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCC
Confidence 665432 33322222 111122222222222 456676566666777899999998875 344421111 12
Q ss_pred ccceEE----EecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCC
Q 004149 241 SVGQVV----WAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESI 316 (771)
Q Consensus 241 ~~~~~~----wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~ 316 (771)
.+..+. |+||++. |+..+ ....|+++|+ .+++........
T Consensus 166 ~v~~~~~~~~~~~~~~~----l~~~~---------------~d~~i~i~d~-----------------~~~~~~~~~~~~ 209 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERV----VCAGY---------------DNGDIKLFDL-----------------RNMALRWETNIK 209 (357)
T ss_dssp CEEEEEEECCCC-CCCE----EEEEE---------------TTSEEEEEET-----------------TTTEEEEEEECS
T ss_pred ceEEEEEEeccCCCCCE----EEEEc---------------cCCeEEEEEC-----------------ccCceeeecCCC
Confidence 445555 7899986 66655 3347899998 666665556666
Q ss_pred ccccceeecC---CCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCC
Q 004149 317 SSAFFPRFSP---DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILS 393 (771)
Q Consensus 317 ~~~~~p~~Sp---DG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~ 393 (771)
..+....|+| +|+.|+..+.+ ..|.+||+.++......... .... ....+..
T Consensus 210 ~~v~~~~~~~~~~~~~~l~~~~~d-----------g~i~i~d~~~~~~~~~~~~~-----~~~~---------~~~~v~~ 264 (357)
T 3i2n_A 210 NGVCSLEFDRKDISMNKLVATSLE-----------GKFHVFDMRTQHPTKGFASV-----SEKA---------HKSTVWQ 264 (357)
T ss_dssp SCEEEEEESCSSSSCCEEEEEEST-----------TEEEEEEEEEEETTTEEEEE-----EEEC---------CSSCEEE
T ss_pred CceEEEEcCCCCCCCCEEEEECCC-----------CeEEEEeCcCCCcccceeee-----ccCC---------CcCCEEE
Confidence 7789999999 99998877654 25888888765432211000 0000 1113456
Q ss_pred CccccCCCEEEEEeeeCCeeEEEEEECCCCc------------------EEEecCCCCCceeeEEeecCCEEEEEEeCCC
Q 004149 394 NPWLSDGCTMLLSSIWGSSQVIISVNVSSGE------------------LLRITPAESNFSWSLLTLDGDNIIAVSSSPV 455 (771)
Q Consensus 394 ~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~------------------~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~ 455 (771)
++|+||++.++++...++...+|.++..... +..+......+....|+++++.|+++.+..
T Consensus 265 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d- 343 (357)
T 3i2n_A 265 VRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFD- 343 (357)
T ss_dssp EEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETT-
T ss_pred EEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCC-
Confidence 7899999877788887888888877642211 223333334455678888888877555432
Q ss_pred CCCeEEEEEec
Q 004149 456 DVPQVKYGYFV 466 (771)
Q Consensus 456 ~p~~l~~~~~~ 466 (771)
..+.+.++.
T Consensus 344 --~~i~iw~~~ 352 (357)
T 3i2n_A 344 --QTVRVLIVT 352 (357)
T ss_dssp --SEEEEEEEC
T ss_pred --CcEEEEECC
Confidence 245555543
No 287
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.33 E-value=5.5e-11 Score=128.44 Aligned_cols=267 Identities=12% Similarity=0.076 Sum_probs=167.5
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
..+...+|||+|+.|+..+..+ .+.+| ..++..+.+.... +. +.+++|+|||+.|+..+.+...
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg-----~i~vwd~~~~~~~~~l~~h~---~~------V~~v~~~~~~~~l~sgs~D~~i 174 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDA-----TIKVWDYETGDFERTLKGHT---DS------VQDISFDHSGKLLASCSADMTI 174 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSS-----CEEEEETTTCCCCEEECCCS---SC------EEEEEECTTSSEEEEEETTSCC
T ss_pred CcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEeccC---Cc------EEEEEEcCCCCEEEEEeCCCeE
Confidence 5688899999999988776543 45566 3344444333211 11 2689999999999988877654
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004149 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
+ .|+............+........|.++....+++..+..|.+||+.++...... ......+..+.|+|||+.
T Consensus 175 ~--iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~~~~g~~--- 248 (410)
T 1vyh_C 175 K--LWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPNQDGTL--- 248 (410)
T ss_dssp C--EEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECTTSSE---
T ss_pred E--EEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE-eCCCccEEEEEECCCCCE---
Confidence 4 4443222222223334444456678888666677778899999999988754431 233446778899999996
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCC--------
Q 004149 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPD-------- 327 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpD-------- 327 (771)
|+..+ .+..|.++|+ .+++ ...+..+...+....|+|+
T Consensus 249 -l~s~s---------------~D~~v~vwd~-----------------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 295 (410)
T 1vyh_C 249 -IASCS---------------NDQTVRVWVV-----------------ATKECKAELREHRHVVECISWAPESSYSSISE 295 (410)
T ss_dssp -EEEEE---------------TTSCEEEEET-----------------TTCCEEEEECCCSSCEEEEEECCSCGGGGGGG
T ss_pred -EEEEc---------------CCCeEEEEEC-----------------CCCceeeEecCCCceEEEEEEcCcccccchhh
Confidence 66655 2346888887 4444 3456666677888999997
Q ss_pred ------------CCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCc
Q 004149 328 ------------GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNP 395 (771)
Q Consensus 328 ------------G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ 395 (771)
|..|+..+.+ ..|.+||+.++.......+ +...+..++
T Consensus 296 ~~~~~~~~~~~~g~~l~sgs~D-----------~~i~iwd~~~~~~~~~~~~-------------------h~~~v~~v~ 345 (410)
T 1vyh_C 296 ATGSETKKSGKPGPFLLSGSRD-----------KTIKMWDVSTGMCLMTLVG-------------------HDNWVRGVL 345 (410)
T ss_dssp CCSCC-------CCEEEEEETT-----------SEEEEEETTTTEEEEEEEC-------------------CSSCEEEEE
T ss_pred hccccccccCCCCCEEEEEeCC-----------CeEEEEECCCCceEEEEEC-------------------CCCcEEEEE
Confidence 5556555543 3588999877653211000 011244678
Q ss_pred cccCCCEEEEEeeeCCeeEEEEEECCCCc-EEEecCCCCCceeeEEeecCCEEEEEE
Q 004149 396 WLSDGCTMLLSSIWGSSQVIISVNVSSGE-LLRITPAESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 396 ~s~dg~~l~~~~~~~~~~~l~~~d~~tg~-~~~l~~~~~~~~~~~~s~d~~~l~~~~ 451 (771)
|+|+|+.| ++...++...+| |+.+++ +..+......+....|++++..|+..+
T Consensus 346 ~~~~g~~l-~s~s~D~~i~vw--d~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs 399 (410)
T 1vyh_C 346 FHSGGKFI-LSCADDKTLRVW--DYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399 (410)
T ss_dssp ECSSSSCE-EEEETTTEEEEE--CCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEE
T ss_pred EcCCCCEE-EEEeCCCeEEEE--ECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEe
Confidence 99999866 455556665555 666665 344444444455667888887665443
No 288
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=99.32 E-value=1.2e-11 Score=122.24 Aligned_cols=198 Identities=11% Similarity=0.083 Sum_probs=123.1
Q ss_pred cEEEEEcCCCCCCCCCcchHHHHHHHHCC---cEEEEECCCCCCC--CChhhh----hc-----CCCCc-----cccchh
Q 004149 538 PLIVVLHGGPHSVSLSSYSKSLAFLSSVG---YSLLIVNYRGSLG--FGEEAL----QS-----LPGKV-----GSQDVN 598 (771)
Q Consensus 538 p~vv~~HGg~~~~~~~~~~~~~~~la~~G---~~V~~~d~rG~~~--~g~~~~----~~-----~~~~~-----~~~~~~ 598 (771)
+.|||+||.+.+ ...|..++..|++.| +.|+.+|.++.+. +...+. +. ...+. .....+
T Consensus 5 ~pvv~iHG~~~~--~~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~ 82 (250)
T 3lp5_A 5 APVIMVPGSSAS--QNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAV 82 (250)
T ss_dssp CCEEEECCCGGG--HHHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHH
T ss_pred CCEEEECCCCCC--HHHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHH
Confidence 458889996654 457888899998876 6777776654221 100000 00 00000 012346
Q ss_pred hHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhC-----CCceeEEEecCCccchhhhhcCCCCCcchhhhhccC
Q 004149 599 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-----PDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGS 673 (771)
Q Consensus 599 D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-----p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 673 (771)
++.++++.+.++. +.+++.|+||||||.++..++.++ ++.++.+|++++..+..... +.
T Consensus 83 ~l~~~~~~l~~~~--~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~-----~~--------- 146 (250)
T 3lp5_A 83 WLNTAFKALVKTY--HFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTS-----TT--------- 146 (250)
T ss_dssp HHHHHHHHHHTTS--CCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCC-----SS---------
T ss_pred HHHHHHHHHHHHc--CCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccc-----cc---------
Confidence 7778888887764 457899999999999999999877 66889988887754322110 00
Q ss_pred CCCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeC----CCCccCcHHHHHHHHHHHhCCCCEEEEEeC--CCCc
Q 004149 674 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGA----QDLRVPVSNGLQYARALREKGVETKVIVFP--NDVH 747 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~----~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~--~~~H 747 (771)
........+... ...+.+ ++|+|+|+|+ .|..||.+.++.+...++......+.+.+. +++|
T Consensus 147 ---------~~~~~~~~l~~~--~~~lp~-~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H 214 (250)
T 3lp5_A 147 ---------AKTSMFKELYRY--RTGLPE-SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAH 214 (250)
T ss_dssp ---------CCCHHHHHHHHT--GGGSCT-TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSS
T ss_pred ---------ccCHHHHHHHhc--cccCCC-CceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCch
Confidence 000111222211 112222 6899999999 999999998888777776533344444554 4679
Q ss_pred cCCCCCChHHHHHHHHHHHH
Q 004149 748 GIERPQSDFESFLNIGLWFK 767 (771)
Q Consensus 748 ~~~~~~~~~~~~~~i~~wl~ 767 (771)
..... +. ++.+.|.+||.
T Consensus 215 ~~l~e-~~-~v~~~I~~FL~ 232 (250)
T 3lp5_A 215 SDLPQ-NK-QIVSLIRQYLL 232 (250)
T ss_dssp CCHHH-HH-HHHHHHHHHTS
T ss_pred hcchh-CH-HHHHHHHHHHh
Confidence 76533 33 67788888875
No 289
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.32 E-value=1.1e-10 Score=123.79 Aligned_cols=256 Identities=12% Similarity=0.012 Sum_probs=131.6
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeE-EEEec-------C-
Q 004149 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKL-LVVRN-------P- 119 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~l-a~~~~-------~- 119 (771)
.++||++|+.. +. . .+.++++... ++..++...+.. +....++|||||++| +++.+ .
T Consensus 47 ~spdg~~l~~~-~~-------~--~v~~~~~~~~-g~~~~~~~~~~~---g~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 47 FDHERKNIYGA-AM-------K--KWSSFAVKSP-TEIVHEASHPIG---GHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp ECTTSSEEEEE-EB-------T--EEEEEEEEET-TEEEEEEEEECC---SSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred ECCCCCEEEEE-cc-------c--eEEEEEECCC-CCEEEeeEeecC---CCCccEEECCCCCEEEEEEecCCcceeccc
Confidence 36799877543 22 1 4666666422 233332211100 113347899999973 45543 1
Q ss_pred ----CCCCCeEEEEecCCcceEEEec-CCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCcc
Q 004149 120 ----ENESPIQFELWSQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKD 194 (771)
Q Consensus 120 ----~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (771)
.++.-.+|.+...++....+.. ..... ....++.|||||++|+.. ..
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~------~~~~~~~~spdG~~l~~~-~~--------------------- 164 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQEN------TGIHGMVFDPTETYLYSA-DL--------------------- 164 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEEEEEEECCTT------CCEEEEEECTTSSEEEEE-ET---------------------
T ss_pred eeecCCceEEEEccCCCCcCcceEeeEEeCCC------CcceEEEECCCCCEEEEE-cC---------------------
Confidence 2233345555434444333321 10000 012488999999987554 21
Q ss_pred CCCCCCcccccCCcCcccCCccCceEEEEEcc-CCceeecc--CCCC-CCccceEEEecCCCCCccEEEEEeecCcceee
Q 004149 195 CNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGEVQAVK--GIPK-SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKL 270 (771)
Q Consensus 195 ~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~-~~~~~~l~--~~~~-~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~ 270 (771)
....|++||++ +|+.+.+. ..+. ...+..++|||||+. |++... .
T Consensus 165 ---------------------~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~----l~v~~~-~----- 213 (365)
T 1jof_A 165 ---------------------TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNY----LYALME-A----- 213 (365)
T ss_dssp ---------------------TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSE----EEEEET-T-----
T ss_pred ---------------------CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCE----EEEEEC-C-----
Confidence 12579999998 77765431 0121 345778899999997 766542 1
Q ss_pred eeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcce-------ecCCC-C--c-------ccccee-ecCCCCEEE
Q 004149 271 GIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-------NLTES-I--S-------SAFFPR-FSPDGKFLV 332 (771)
Q Consensus 271 g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~-------~lt~~-~--~-------~~~~p~-~SpDG~~l~ 332 (771)
...|.+++++. .+++.. .+... . . ....++ |||||++|+
T Consensus 214 --------~~~v~v~~~~~---------------~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~ 270 (365)
T 1jof_A 214 --------GNRICEYVIDP---------------ATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMF 270 (365)
T ss_dssp --------TTEEEEEEECT---------------TTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred --------CCeEEEEEEeC---------------CCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEE
Confidence 12344443310 334321 12111 0 1 356788 999999885
Q ss_pred EEecCCCCCCCCccccccceeeecC-CCCCCCCccceeeEEecccccCCCCCcccccCCCCCCcccc---CCCEEEEEee
Q 004149 333 FLSAKSSVDSGAHSATDSLHRIDWP-TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS---DGCTMLLSSI 408 (771)
Q Consensus 333 f~~~~~~~~~g~~~~~~~l~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~---dg~~l~~~~~ 408 (771)
.+++.. . ......|.++++. +++...+ ...... .......++|+| ||++|++...
T Consensus 271 -v~~~~~---~-~~~~~~i~v~~~~~~g~~~~~-------~~~~~~---------~~~~~~~~a~sp~~~dg~~l~v~~~ 329 (365)
T 1jof_A 271 -ASSRAN---K-FELQGYIAGFKLRDCGSIEKQ-------LFLSPT---------PTSGGHSNAVSPCPWSDEWMAITDD 329 (365)
T ss_dssp -EEEEES---S-TTSCCEEEEEEECTTSCEEEE-------EEEEEC---------SSCCTTCCCEEECTTCTTEEEEECS
T ss_pred -EECCCC---C-CCCCCeEEEEEECCCCCEEEe-------eeeeec---------CCCCcccceecCCCcCCCEEEEEEc
Confidence 443320 0 0001257777775 3332111 000000 001245678999 8998877655
Q ss_pred eCCeeEEEEEECC
Q 004149 409 WGSSQVIISVNVS 421 (771)
Q Consensus 409 ~~~~~~l~~~d~~ 421 (771)
..+...+|.++.+
T Consensus 330 ~~~~v~v~~~~~~ 342 (365)
T 1jof_A 330 QEGWLEIYRWKDE 342 (365)
T ss_dssp SSCEEEEEEEETT
T ss_pred CCCeEEEEEEchh
Confidence 5567778877753
No 290
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.32 E-value=1.7e-11 Score=145.25 Aligned_cols=235 Identities=9% Similarity=0.032 Sum_probs=146.4
Q ss_pred cCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEE
Q 004149 48 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 127 (771)
Q Consensus 48 ~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 127 (771)
..+|||..|+... ..+.+.+|++..+ .....+.... +.+..++|||||++||.....+ .+
T Consensus 20 ~~sp~~~~la~~~---------~~g~v~iwd~~~~-~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~dg-----~i 79 (814)
T 3mkq_A 20 DFHPTEPWVLTTL---------YSGRVEIWNYETQ-VEVRSIQVTE-----TPVRAGKFIARKNWIIVGSDDF-----RI 79 (814)
T ss_dssp EECSSSSEEEEEE---------TTSEEEEEETTTT-EEEEEEECCS-----SCEEEEEEEGGGTEEEEEETTS-----EE
T ss_pred EECCCCCEEEEEe---------CCCEEEEEECCCC-ceEEEEecCC-----CcEEEEEEeCCCCEEEEEeCCC-----eE
Confidence 4577898888764 2346677666332 1223333222 5688999999999999876543 45
Q ss_pred EEe--cCCcceEEEec-CCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCC-CCCCCCccCCCCCCccc
Q 004149 128 ELW--SQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGST-KGGSSDKDCNSWKGQGD 203 (771)
Q Consensus 128 ~~~--~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 203 (771)
.+| ..++....... ... +..++|||||++|+..+.+.... .|+.... ........+........
T Consensus 80 ~vw~~~~~~~~~~~~~~~~~----------v~~~~~s~~~~~l~~~~~dg~i~--vw~~~~~~~~~~~~~~~~~~v~~~~ 147 (814)
T 3mkq_A 80 RVFNYNTGEKVVDFEAHPDY----------IRSIAVHPTKPYVLSGSDDLTVK--LWNWENNWALEQTFEGHEHFVMCVA 147 (814)
T ss_dssp EEEETTTCCEEEEEECCSSC----------EEEEEECSSSSEEEEEETTSEEE--EEEGGGTSEEEEEEECCSSCEEEEE
T ss_pred EEEECCCCcEEEEEecCCCC----------EEEEEEeCCCCEEEEEcCCCEEE--EEECCCCceEEEEEcCCCCcEEEEE
Confidence 566 33433333321 222 26899999999999877654332 2322111 11111222333445667
Q ss_pred ccC-CcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEec--CCCCCccEEEEEeecCcceeeeeeeeccCCc
Q 004149 204 WEE-DWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP--LNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 280 (771)
Q Consensus 204 ~~~-d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wsp--Dg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~ 280 (771)
|++ +....+++.....|.+||+.+++............+..+.|+| ||+. |+..+ ...
T Consensus 148 ~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----l~~~~---------------~dg 208 (814)
T 3mkq_A 148 FNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPY----MITAS---------------DDL 208 (814)
T ss_dssp EETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCE----EEEEC---------------TTS
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCE----EEEEe---------------CCC
Confidence 888 5445556666789999999876644331123335678899999 8886 66654 334
Q ss_pred eeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCC
Q 004149 281 ALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 359 (771)
Q Consensus 281 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~ 359 (771)
.|.++|+ .+++ ...+..+...+..+.|+|||+.|+..+.+. .|.+||+.++
T Consensus 209 ~i~~~d~-----------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----------~v~vwd~~~~ 260 (814)
T 3mkq_A 209 TIKIWDY-----------------QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG-----------TLKIWNSSTY 260 (814)
T ss_dssp EEEEEET-----------------TTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS-----------CEEEEETTTC
T ss_pred EEEEEEC-----------------CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC-----------eEEEEECCCC
Confidence 7888887 4443 455555667788999999999888776543 4888888775
Q ss_pred CC
Q 004149 360 GN 361 (771)
Q Consensus 360 ~~ 361 (771)
..
T Consensus 261 ~~ 262 (814)
T 3mkq_A 261 KV 262 (814)
T ss_dssp SE
T ss_pred cE
Confidence 53
No 291
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.32 E-value=6.2e-11 Score=123.83 Aligned_cols=228 Identities=11% Similarity=0.011 Sum_probs=138.5
Q ss_pred eEEEEe-cCCcceEEEecCC---cccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCC
Q 004149 125 IQFELW-SQSQLEKEFHVPQ---TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKG 200 (771)
Q Consensus 125 ~~~~~~-~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (771)
.+..++ ..++..+.+.... .. ..++|||||++|++....
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~----------~~~~~s~dg~~l~v~~~~--------------------------- 54 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTP----------MVPMVAPGGRIAYATVNK--------------------------- 54 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCC----------CCEEECTTSSEEEEEETT---------------------------
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCc----------cceEEcCCCCEEEEEeCC---------------------------
Confidence 455555 4455554454433 23 589999999988776432
Q ss_pred cccccCCcCcccCCccCceEEEEEccCCceeeccCCCC----CCccceEEEecCCCCCccEEEEEeecCcceeeeeeeec
Q 004149 201 QGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK----SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCY 276 (771)
Q Consensus 201 ~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~----~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~ 276 (771)
...|++||+.+++......... ...+..++|+|||+. |++........+... .
T Consensus 55 ----------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~----l~~~~~~~~~~~~~~---~ 111 (337)
T 1pby_B 55 ----------------SESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKT----LAIYESPVRLELTHF---E 111 (337)
T ss_dssp ----------------TTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSE----EEEEEEEEEECSSCE---E
T ss_pred ----------------CCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCE----EEEEecccccccccc---c
Confidence 2579999999888654311121 114668899999997 777642110000000 0
Q ss_pred cCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeec
Q 004149 277 NRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW 356 (771)
Q Consensus 277 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~ 356 (771)
.....|+++|+ .+++.............+.|||||++|++.+ ..|+++|+
T Consensus 112 ~~~~~i~v~d~-----------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~-------------~~i~~~d~ 161 (337)
T 1pby_B 112 VQPTRVALYDA-----------------ETLSRRKAFEAPRQITMLAWARDGSKLYGLG-------------RDLHVMDP 161 (337)
T ss_dssp ECCCEEEEEET-----------------TTTEEEEEEECCSSCCCEEECTTSSCEEEES-------------SSEEEEET
T ss_pred ccCceEEEEEC-----------------CCCcEEEEEeCCCCcceeEECCCCCEEEEeC-------------CeEEEEEC
Confidence 02358999998 5555443333344567789999999988772 24899998
Q ss_pred CCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCee---------------------EE
Q 004149 357 PTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ---------------------VI 415 (771)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~---------------------~l 415 (771)
.+++.... +.. .. ......|+|||+.|++.....+.. .|
T Consensus 162 ~~~~~~~~----------~~~---~~-------~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 221 (337)
T 1pby_B 162 EAGTLVED----------KPI---QS-------WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGL 221 (337)
T ss_dssp TTTEEEEE----------ECS---TT-------TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEE
T ss_pred CCCcEeee----------eec---cc-------cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccce
Confidence 87653211 100 00 012347899998776654333322 68
Q ss_pred EEEECCCCcEEEecCC--CCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 416 ISVNVSSGELLRITPA--ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 416 ~~~d~~tg~~~~l~~~--~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
+.+|+.+++...+... ........+++|++.+++. . ..|++.++.++
T Consensus 222 ~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~-----~~v~~~d~~~~ 270 (337)
T 1pby_B 222 LTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-Y-----NVLESFDLEKN 270 (337)
T ss_dssp EEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-E-----SEEEEEETTTT
T ss_pred EEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-C-----CeEEEEECCCC
Confidence 8999999987644322 1223446899999998877 1 56888876543
No 292
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.32 E-value=3.3e-10 Score=123.37 Aligned_cols=265 Identities=11% Similarity=0.100 Sum_probs=154.2
Q ss_pred hhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCC-CCCeEEEEecCCCCCCeEEEEec-CCcceEEEecC
Q 004149 65 LLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSP-SGSKLLVVRNPENESPIQFELWS-QSQLEKEFHVP 142 (771)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 142 (771)
++.+...+.|.+|++...... ..++ +....+.+...+||| ||++|+..+.++ .+.+|+ .+...+.+...
T Consensus 135 lasGs~dg~i~lWd~~~~~~~-~~~~---~~gH~~~V~~l~f~p~~~~~l~s~s~D~-----~v~iwd~~~~~~~~~~~~ 205 (435)
T 4e54_B 135 VAVGSKGGDIMLWNFGIKDKP-TFIK---GIGAGGSITGLKFNPLNTNQFYASSMEG-----TTRLQDFKGNILRVFASS 205 (435)
T ss_dssp EEEEETTSCEEEECSSCCSCC-EEEC---CCSSSCCCCEEEECSSCTTEEEEECSSS-----CEEEEETTSCEEEEEECC
T ss_pred EEEEeCCCEEEEEECCCCCce-eEEE---ccCCCCCEEEEEEeCCCCCEEEEEeCCC-----EEEEeeccCCceeEEecc
Confidence 445556678888887544321 1111 111235688999999 677776654432 456663 33333333222
Q ss_pred CcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEE
Q 004149 143 QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFV 222 (771)
Q Consensus 143 ~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v 222 (771)
.... .++.++.|+|||+.|+.... ...|++
T Consensus 206 ~~~~------~~~~~~~~~~~~~~l~~g~~--------------------------------------------dg~i~~ 235 (435)
T 4e54_B 206 DTIN------IWFCSLDVSASSRMVVTGDN--------------------------------------------VGNVIL 235 (435)
T ss_dssp SSCS------CCCCCEEEETTTTEEEEECS--------------------------------------------SSBEEE
T ss_pred CCCC------ccEEEEEECCCCCEEEEEeC--------------------------------------------CCcEee
Confidence 1111 12358899999998887532 357899
Q ss_pred EEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcC
Q 004149 223 ININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKES 302 (771)
Q Consensus 223 ~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 302 (771)
||+.+..+..+ ......+..+.|+|+++. +++++. .+..|.++|+
T Consensus 236 wd~~~~~~~~~--~~h~~~v~~v~~~p~~~~----~~~s~s--------------~d~~v~iwd~--------------- 280 (435)
T 4e54_B 236 LNMDGKELWNL--RMHKKKVTHVALNPCCDW----FLATAS--------------VDQTVKIWDL--------------- 280 (435)
T ss_dssp EESSSCBCCCS--BCCSSCEEEEEECTTCSS----EEEEEE--------------TTSBCCEEET---------------
T ss_pred eccCcceeEEE--ecccceEEeeeecCCCce----EEEEec--------------CcceeeEEec---------------
Confidence 99988776666 344556889999999998 776652 2235677776
Q ss_pred CCCCCc----ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEeccccc
Q 004149 303 SSEDLP----VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCA 378 (771)
Q Consensus 303 ~~~~~~----~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 378 (771)
...+ ......+...+.+..|||||++|+..+.+. .|.+||+.++........ ..
T Consensus 281 --~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~-----------~i~iwd~~~~~~~~~~~~---------~~ 338 (435)
T 4e54_B 281 --RQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS-----------EIRVYSASQWDCPLGLIP---------HP 338 (435)
T ss_dssp --TTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS-----------CEEEEESSSSSSEEEECC---------CC
T ss_pred --ccccccceEEEeeeccccccceeECCCCCeeEEEcCCC-----------EEEEEECCCCccceEEec---------cc
Confidence 2222 122234455688899999999998777653 488899877654211000 00
Q ss_pred CCCCCcccccCCCCCCccccCCCEEEEEeeeCC---------eeEEEEEECCCCcEEEec-CCCC-C-ceeeEEeecCCE
Q 004149 379 EGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS---------SQVIISVNVSSGELLRIT-PAES-N-FSWSLLTLDGDN 446 (771)
Q Consensus 379 ~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~---------~~~l~~~d~~tg~~~~l~-~~~~-~-~~~~~~s~d~~~ 446 (771)
...+. ........|++++..+++....++ ...|..+|..+|+..... .... . .....|+|+|+.
T Consensus 339 -~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~ 414 (435)
T 4e54_B 339 -HRHFQ---HLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDT 414 (435)
T ss_dssp -CCCCS---SSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSC
T ss_pred -ccccc---cceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCE
Confidence 00000 001234567888776655543221 124666788888866443 2222 2 233468999987
Q ss_pred EEE
Q 004149 447 IIA 449 (771)
Q Consensus 447 l~~ 449 (771)
|+.
T Consensus 415 las 417 (435)
T 4e54_B 415 LAS 417 (435)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 293
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.31 E-value=1.2e-10 Score=127.16 Aligned_cols=179 Identities=8% Similarity=0.061 Sum_probs=101.9
Q ss_pred CCCCCCcccccCCcCcccCCccCceEEEEEcc-CCceeecc------CCCCCCccceEEEecCCCCCccEEEEEeecCcc
Q 004149 195 CNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGEVQAVK------GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSET 267 (771)
Q Consensus 195 ~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~-~~~~~~l~------~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~ 267 (771)
+........|.++....+++ .+..|.+||+. +++...+. -......+..++|+|||.. +++++.
T Consensus 176 h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~----~l~s~~---- 246 (447)
T 3dw8_B 176 HTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN----TFVYSS---- 246 (447)
T ss_dssp CSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTT----EEEEEE----
T ss_pred CCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCc----EEEEEe----
Confidence 34445567788885555555 78899999998 34333310 0223446788999999944 444441
Q ss_pred eeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-----ceecCCCCc------------cccceeecCCCCE
Q 004149 268 RKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-----VVNLTESIS------------SAFFPRFSPDGKF 330 (771)
Q Consensus 268 ~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~lt~~~~------------~~~~p~~SpDG~~ 330 (771)
.+..|.++|+ .+++ ...+..+.. .+....|||||+.
T Consensus 247 ----------~dg~i~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 299 (447)
T 3dw8_B 247 ----------SKGTIRLCDM-----------------RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY 299 (447)
T ss_dssp ----------TTSCEEEEET-----------------TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSE
T ss_pred ----------CCCeEEEEEC-----------------cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCE
Confidence 2336888887 4443 244544443 6889999999999
Q ss_pred EEEEecCCCCCCCCccccccceeeecCC-CCCCCCccceeeEEecc-cccCCCCCcccccCCCCCCccccCCCEEEEEee
Q 004149 331 LVFLSAKSSVDSGAHSATDSLHRIDWPT-NGNFSSLEKIVDVIPVV-QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 408 (771)
Q Consensus 331 l~f~~~~~~~~~g~~~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~-~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~ 408 (771)
|+..+. . .|.+||+.+ +...........+...+ ....... + .....++|+|||+.| ++..
T Consensus 300 l~~~~~-~-----------~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---i--~~~~~~~~s~~~~~l-~s~s 361 (447)
T 3dw8_B 300 MMTRDY-L-----------SVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDC---I--FDKFECCWNGSDSVV-MTGS 361 (447)
T ss_dssp EEEEES-S-----------EEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSG---G--GCCCCEEECTTSSEE-EEEC
T ss_pred EEEeeC-C-----------eEEEEeCCCCccccceeeccccccccccccccccc---c--ccceEEEECCCCCEE-EEec
Confidence 886554 2 488899876 43322111110000000 0000000 0 012347899999976 5555
Q ss_pred eCCeeEEEEEECCCCcEEEec
Q 004149 409 WGSSQVIISVNVSSGELLRIT 429 (771)
Q Consensus 409 ~~~~~~l~~~d~~tg~~~~l~ 429 (771)
.++. |+.+|+.+++...+.
T Consensus 362 ~dg~--v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 362 YNNF--FRMFDRNTKRDITLE 380 (447)
T ss_dssp STTE--EEEEETTTCCEEEEE
T ss_pred cCCE--EEEEEcCCCcceeee
Confidence 5554 555588888876654
No 294
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.31 E-value=6.1e-11 Score=128.26 Aligned_cols=289 Identities=14% Similarity=0.103 Sum_probs=169.9
Q ss_pred ccceEEEeCCCCC-eEEEEecCCCCCCeEEEEe---cCCc------ceEEEecCCccccccc-CCCcccceeecCCCCeE
Q 004149 99 TGASAVVPSPSGS-KLLVVRNPENESPIQFELW---SQSQ------LEKEFHVPQTVHGSVY-ADGWFEGISWNSDETLI 167 (771)
Q Consensus 99 ~~~~~~~~SPdG~-~la~~~~~~~~~~~~~~~~---~~~~------~~~~~~~~~~~~g~~~-~~~~~~~~~wSpDg~~l 167 (771)
..+...+|||||+ .||..... +.-.+|.+. ..+. ...........+.... ..+.+.+++|||||+.|
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 123 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKN--SVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSI 123 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETB--TEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEE
T ss_pred CceEEEEECCCCCcEEEEecCC--ceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEE
Confidence 3578899999999 88876543 333444441 1122 1122221111110000 01134799999999999
Q ss_pred EEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCc------
Q 004149 168 AYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLS------ 241 (771)
Q Consensus 168 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~------ 241 (771)
+....+.... .|+ ...........+........|.++....+++.....|.+||+.+++..... ......
T Consensus 124 ~~~~~dg~i~--i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~ 199 (425)
T 1r5m_A 124 VTGVENGELR--LWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHF-ELKETGGSSINA 199 (425)
T ss_dssp EEEETTSCEE--EEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEE-CCC---------
T ss_pred EEEeCCCeEE--EEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEe-eccccCccceee
Confidence 9887655322 233 111111112223334446678888666667777889999999888765542 111112
Q ss_pred ---------cceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-cee
Q 004149 242 ---------VGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVN 311 (771)
Q Consensus 242 ---------~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~ 311 (771)
+..+.|+|++. ++..+ ....|+++|+ .+++ ...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~-----~~~~~---------------~~g~i~~~d~-----------------~~~~~~~~ 242 (425)
T 1r5m_A 200 ENHSGDGSLGVDVEWVDDDK-----FVIPG---------------PKGAIFVYQI-----------------TEKTPTGK 242 (425)
T ss_dssp ------CCCBSCCEEEETTE-----EEEEC---------------GGGCEEEEET-----------------TCSSCSEE
T ss_pred ccccCCcceeeEEEEcCCCE-----EEEEc---------------CCCeEEEEEc-----------------CCCceeee
Confidence 67889999864 44443 2347889998 4443 445
Q ss_pred cCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCC
Q 004149 312 LTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSI 391 (771)
Q Consensus 312 lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~ 391 (771)
+..+...+....|+|||+.|+..+.+. .|.+||+.+++........ ...+
T Consensus 243 ~~~~~~~i~~~~~~~~~~~l~~~~~d~-----------~i~i~d~~~~~~~~~~~~~-------------------~~~i 292 (425)
T 1r5m_A 243 LIGHHGPISVLEFNDTNKLLLSASDDG-----------TLRIWHGGNGNSQNCFYGH-------------------SQSI 292 (425)
T ss_dssp ECCCSSCEEEEEEETTTTEEEEEETTS-----------CEEEECSSSBSCSEEECCC-------------------SSCE
T ss_pred eccCCCceEEEEECCCCCEEEEEcCCC-----------EEEEEECCCCccceEecCC-------------------CccE
Confidence 556667788999999999888776542 4888988775542211100 1124
Q ss_pred CCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC-CCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 392 LSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA-ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 392 ~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~-~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
..++|+||+ ++++...++ .|..+|+.+++....... ...+....|+++++.|+....+ ..+.+.++.+.
T Consensus 293 ~~~~~~~~~--~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~i~i~~~~~~ 362 (425)
T 1r5m_A 293 VSASWVGDD--KVISCSMDG--SVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMD----GQVNVYDLKKL 362 (425)
T ss_dssp EEEEEETTT--EEEEEETTS--EEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETT----SCEEEEECHHH
T ss_pred EEEEECCCC--EEEEEeCCC--cEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECC----CeEEEEECCCC
Confidence 567899999 445555454 455668878776654433 3455667889999877765532 35777776543
No 295
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.30 E-value=5e-11 Score=124.00 Aligned_cols=270 Identities=12% Similarity=0.099 Sum_probs=158.6
Q ss_pred ccceEEEeCCCC-CeEEEEecCCCCCCeEEEEecCCc-c-eEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCC
Q 004149 99 TGASAVVPSPSG-SKLLVVRNPENESPIQFELWSQSQ-L-EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 175 (771)
Q Consensus 99 ~~~~~~~~SPdG-~~la~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~ 175 (771)
+.+...+|||++ +.|+..+.. +.-.+|.+..... . ..+..+. +..+ .+..+.|+|||++|+..+.+..
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s~D--~~v~~W~~~~~~~~~~~~~~~~~-~h~~------~v~~~~~s~dg~~l~s~s~D~~ 88 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSASRD--KTLISWKLTGDDQKFGVPVRSFK-GHSH------IVQDCTLTADGAYALSASWDKT 88 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEETT--SEEEEEEEEEETTEEEEEEEEEE-CCSS------CEEEEEECTTSSEEEEEETTSE
T ss_pred ceEEEEEccCCCccEEEEecCC--ccEEEecCCCCCccccccceEEe-CCcc------cEEEEEECCCCCEEEEEeCCCE
Confidence 457889999977 555554433 3223333331111 1 1111111 1111 1268899999999998887664
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCC---
Q 004149 176 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE--- 252 (771)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~--- 252 (771)
.+ .|+............+........|.++....+++..+..|.+||+.+.....+ ......+..+.|+|+++
T Consensus 89 v~--~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~ 164 (319)
T 3frx_A 89 LR--LWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATL--LGHNDWVSQVRVVPNEKADD 164 (319)
T ss_dssp EE--EEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEE--CCCSSCEEEEEECCC-----
T ss_pred EE--EEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE--eccCCcEEEEEEccCCCCCC
Confidence 43 344322222222223334444566788766667777788999999988777777 44555677889998543
Q ss_pred ---CCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCC
Q 004149 253 ---GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDG 328 (771)
Q Consensus 253 ---~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG 328 (771)
. |+..+ .+..|.++|+ ...+ ...+..+...+....|||||
T Consensus 165 ~~~~----l~s~~---------------~d~~i~~wd~-----------------~~~~~~~~~~~h~~~v~~~~~sp~g 208 (319)
T 3frx_A 165 DSVT----IISAG---------------NDKMVKAWNL-----------------NQFQIEADFIGHNSNINTLTASPDG 208 (319)
T ss_dssp -CCE----EEEEE---------------TTSCEEEEET-----------------TTTEEEEEECCCCSCEEEEEECTTS
T ss_pred CccE----EEEEe---------------CCCEEEEEEC-----------------CcchhheeecCCCCcEEEEEEcCCC
Confidence 3 44333 3346888887 4443 34566667778999999999
Q ss_pred CEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEee
Q 004149 329 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 408 (771)
Q Consensus 329 ~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~ 408 (771)
+.|+..+.+ ..|.+||+.+++........ ..+..++|+||+..|+...
T Consensus 209 ~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~~--------------------~~v~~~~~sp~~~~la~~~- 256 (319)
T 3frx_A 209 TLIASAGKD-----------GEIMLWNLAAKKAMYTLSAQ--------------------DEVFSLAFSPNRYWLAAAT- 256 (319)
T ss_dssp SEEEEEETT-----------CEEEEEETTTTEEEEEEECC--------------------SCEEEEEECSSSSEEEEEE-
T ss_pred CEEEEEeCC-----------CeEEEEECCCCcEEEEecCC--------------------CcEEEEEEcCCCCEEEEEc-
Confidence 998877755 35889998775432110000 1244678999998665443
Q ss_pred eCCeeEEEEEECCCCcEEE-ecCCC--------CCceeeEEeecCCEEEEEEe
Q 004149 409 WGSSQVIISVNVSSGELLR-ITPAE--------SNFSWSLLTLDGDNIIAVSS 452 (771)
Q Consensus 409 ~~~~~~l~~~d~~tg~~~~-l~~~~--------~~~~~~~~s~d~~~l~~~~s 452 (771)
.....+|. ++++.... +.... .......|+|||+.|+....
T Consensus 257 -~~~i~v~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~ 306 (319)
T 3frx_A 257 -ATGIKVFS--LDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYT 306 (319)
T ss_dssp -TTEEEEEE--ETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEET
T ss_pred -CCCcEEEE--eCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeec
Confidence 33445554 44444332 22111 12234688999998876553
No 296
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.30 E-value=1.1e-11 Score=132.26 Aligned_cols=234 Identities=10% Similarity=0.057 Sum_probs=135.6
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCC
Q 004149 100 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 179 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 179 (771)
.+...+|||||++||..... +.-.+|.+.. +....+..+. ...+ .+.+++|+|||+.|+..+.+
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d--~~i~iw~~~~-~~~~~~~~~~-~h~~------~v~~~~~s~~~~~l~s~s~d------ 76 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTAT--NQVELYEQDG-NGWKHARTFS-DHDK------IVTCVDWAPKSNRIVTCSQD------ 76 (377)
T ss_dssp CCSCCEECSSSSEEECCCSS--SCBCEEEEET-TEEEECCCBC-CCSS------CEEEEEECTTTCCEEEEETT------
T ss_pred cEEEEEECCCCCEEEEecCC--CEEEEEEccC-CceEEEEEEe-cCCc------eEEEEEEeCCCCEEEEEeCC------
Confidence 47788999999998865432 3344444432 2111211111 1111 23689999999999886533
Q ss_pred CccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCc----eeeccCCCCCCccceEEEecCCCCCc
Q 004149 180 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE----VQAVKGIPKSLSVGQVVWAPLNEGLH 255 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~----~~~l~~~~~~~~~~~~~wspDg~~~~ 255 (771)
..|.+||+.+++ ...+ ......+..+.|+|||+.
T Consensus 77 --------------------------------------~~v~vwd~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~-- 114 (377)
T 3dwl_C 77 --------------------------------------RNAYVYEKRPDGTWKQTLVL--LRLNRAATFVRWSPNEDK-- 114 (377)
T ss_dssp --------------------------------------SSEEEC------CCCCEEEC--CCCSSCEEEEECCTTSSC--
T ss_pred --------------------------------------CeEEEEEcCCCCceeeeeEe--cccCCceEEEEECCCCCE--
Confidence 568899998876 3344 345557889999999998
Q ss_pred cEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc----ceecCC-CCccccceeecCCCCE
Q 004149 256 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP----VVNLTE-SISSAFFPRFSPDGKF 330 (771)
Q Consensus 256 ~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~----~~~lt~-~~~~~~~p~~SpDG~~ 330 (771)
|+..+ ....|.++|+ .+++ ...+.. +...+....|+|||+.
T Consensus 115 --l~~~~---------------~d~~i~iwd~-----------------~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 160 (377)
T 3dwl_C 115 --FAVGS---------------GARVISVCYF-----------------EQENDWWVSKHLKRPLRSTILSLDWHPNNVL 160 (377)
T ss_dssp --CEEEE---------------SSSCEEECCC----------------------CCCCEEECSSCCSCEEEEEECTTSSE
T ss_pred --EEEEe---------------cCCeEEEEEE-----------------CCcccceeeeEeecccCCCeEEEEEcCCCCE
Confidence 88776 2336777777 4443 455655 6677899999999999
Q ss_pred EEEEecCCCCCCCCccccccceeeecCCCCCCCCccc--------eeeEEecccccCCCCCcccccCCCCCCccccCCCE
Q 004149 331 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK--------IVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCT 402 (771)
Q Consensus 331 l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~ 402 (771)
|+..+.+. .|.+||+..++....... .......+ .+...+..++|+|||+.
T Consensus 161 l~~~~~d~-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~sp~~~~ 219 (377)
T 3dwl_C 161 LAAGCADR-----------KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY----------PSGGWVHAVGFSPSGNA 219 (377)
T ss_dssp EEEEESSS-----------CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC----------CCSSSEEEEEECTTSSC
T ss_pred EEEEeCCC-----------EEEEEEEEecccCCCccccccccccchhhhhhcc----------cCCceEEEEEECCCCCE
Confidence 98877653 478888764432111000 00111111 01123457789999996
Q ss_pred EEEEeeeCCeeEEEEEECCCCcE-----EEecCCCCCceeeEEeecCCEEEE
Q 004149 403 MLLSSIWGSSQVIISVNVSSGEL-----LRITPAESNFSWSLLTLDGDNIIA 449 (771)
Q Consensus 403 l~~~~~~~~~~~l~~~d~~tg~~-----~~l~~~~~~~~~~~~s~d~~~l~~ 449 (771)
|+ +...++...|| |+.+++. ..+......+....|+++++.|+.
T Consensus 220 l~-~~~~d~~i~iw--d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 268 (377)
T 3dwl_C 220 LA-YAGHDSSVTIA--YPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAA 268 (377)
T ss_dssp EE-EEETTTEEC-C--EECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEE
T ss_pred EE-EEeCCCcEEEE--ECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEE
Confidence 64 44555655555 5555553 333333444566788999875543
No 297
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=99.29 E-value=1.5e-12 Score=143.53 Aligned_cols=222 Identities=14% Similarity=0.097 Sum_probs=131.4
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCC-cchHHHHHH-HHCCcEEEEECCCCC-CCCChhhhhcCCCC
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLAFL-SSVGYSLLIVNYRGS-LGFGEEALQSLPGK 591 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~-~~~~~~~~l-a~~G~~V~~~d~rG~-~~~g~~~~~~~~~~ 591 (771)
+.|.+. ..+|.|......++.|+||++|||++..... .+....... ...|++|+.+|||.. -||+........+
T Consensus 82 ~edcl~--l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~~- 158 (522)
T 1ukc_A 82 SEDCLF--INVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNG- 158 (522)
T ss_dssp ESCCCE--EEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHSS-
T ss_pred CCcCCE--EEEEECCCCCCCCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccccC-
Confidence 344544 4678887544456789999999998765432 232221111 256999999999942 2232211111011
Q ss_pred ccccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHHhC----CCceeEEEecCCccchhhhhcCCCCCc
Q 004149 592 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA----PDKFVAAAARNPLCNLALMVGTTDIPD 664 (771)
Q Consensus 592 ~~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~----p~~~~a~v~~~p~~~~~~~~~~~~~~~ 664 (771)
.+...+.|+.++++|+.++. ..|++||.|+|+|.||.++..++... +.+|+++|+.+|....... .....
T Consensus 159 ~~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~~~~~---~~~~~ 235 (522)
T 1ukc_A 159 DLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWPTQRT---VSEME 235 (522)
T ss_dssp CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCCCCCC---SGGGH
T ss_pred CCChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcCCcCC---HHHHH
Confidence 12345889999999998862 36899999999999999888776643 5689999999986532110 00000
Q ss_pred c---hhhhhccCCCCCcCCCCCChhhHHHHhhcCcccc---------ccCCCCc--EEEEeeCCCCccCcHHHHHHHHHH
Q 004149 665 W---CYVESYGSKGKDSFTESPSVEDLTRFHSKSPISH---------ISKVKTP--TIFLLGAQDLRVPVSNGLQYARAL 730 (771)
Q Consensus 665 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~---------~~~i~~P--~Lii~G~~D~~vp~~~~~~~~~~l 730 (771)
+ .+....++. ...+..+.++..++... ......| .+..++..|..+.+++..++.+..
T Consensus 236 ~~~~~~~~~~gc~--------~~~~~~~~Lr~~~~~~l~~a~~~~~~~~~~~~~~~~~~f~Pv~D~~~l~~~p~~~~~~g 307 (522)
T 1ukc_A 236 FQFERFVNDTGCS--------SARDSLECLREQDIATIQKGNTGSPFPGGSSSPLPDWYFLPVTDGSLVPDELYNAFDAG 307 (522)
T ss_dssp HHHHHHHHHTTCT--------TCSSHHHHHHHSCHHHHHHHSSCCCCTTCCSSSCCSCCSCCCCCSSSSCSCHHHHHHHT
T ss_pred HHHHHHHHHcCCC--------CHHHHHHHHHcCCHHHHHHHHHhccccccccCcccccccccccCCcccCCCHHHHHhcC
Confidence 0 111222221 01112222332222111 1112233 455677778777777777777766
Q ss_pred HhCCCCEEEEEeCCCCccCC
Q 004149 731 REKGVETKVIVFPNDVHGIE 750 (771)
Q Consensus 731 ~~~g~~~~~~~~~~~~H~~~ 750 (771)
+..++++-+-...+++|.+.
T Consensus 308 ~~~~vp~l~G~~~~Eg~~f~ 327 (522)
T 1ukc_A 308 NFIKVPVLVGDDTDEGSNFA 327 (522)
T ss_dssp CSCCCCEEEEEETBGGGGTS
T ss_pred CCCCCCEEEEeecchhHHhh
Confidence 55667777778888899775
No 298
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.29 E-value=2.8e-11 Score=150.35 Aligned_cols=272 Identities=11% Similarity=-0.010 Sum_probs=165.4
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004149 100 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
.+...+|||+|+.+++....+ . +...+ ..+....... ...+ .+.+++|||||+.|+..+.+....
T Consensus 963 ~i~~~~~sp~g~~l~~g~~~g--~--i~i~d~~~~~~~~~~~---~h~~------~v~~l~~s~dg~~l~s~~~dg~i~- 1028 (1249)
T 3sfz_A 963 QVSCCCLSPHLEYVAFGDEDG--A--IKIIELPNNRVFSSGV---GHKK------AVRHIQFTADGKTLISSSEDSVIQ- 1028 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTS--C--CEEEETTTTSCEEECC---CCSS------CCCCEEECSSSSCEEEECSSSBEE-
T ss_pred cEEEEEEcCCCCEEEEEcCCC--C--EEEEEcCCCceeeecc---cCCC------ceEEEEECCCCCEEEEEcCCCEEE-
Confidence 467789999999998876543 2 33223 2333222221 1111 226899999999999887655322
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEE
Q 004149 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 258 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l 258 (771)
.|+....... ....+......+.|.++ +..+++.....|.+||+.+++..... ......+..++|||||+. |
T Consensus 1029 -vwd~~~~~~~-~~~~~~~~v~~~~~~~~-~~l~~~~~dg~v~vwd~~~~~~~~~~-~~~~~~v~~~~~s~d~~~----l 1100 (1249)
T 3sfz_A 1029 -VWNWQTGDYV-FLQAHQETVKDFRLLQD-SRLLSWSFDGTVKVWNVITGRIERDF-TCHQGTVLSCAISSDATK----F 1100 (1249)
T ss_dssp -EEETTTTEEE-CCBCCSSCEEEEEECSS-SEEEEEESSSEEEEEETTTTCCCEEE-ECCSSCCCCEEECSSSSS----C
T ss_pred -EEECCCCceE-EEecCCCcEEEEEEcCC-CcEEEEECCCcEEEEECCCCceeEEE-cccCCcEEEEEECCCCCE----E
Confidence 2332211111 11122223334556665 45566667789999999988754431 234456788999999998 8
Q ss_pred EEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC-cceecCCCCccccceeecCCCCEEEEEecC
Q 004149 259 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTESISSAFFPRFSPDGKFLVFLSAK 337 (771)
Q Consensus 259 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~ 337 (771)
+..+ .+..|.++|+ .++ ....+..+...+...+|||||+.|+..+.+
T Consensus 1101 ~s~s---------------~d~~v~iwd~-----------------~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~d 1148 (1249)
T 3sfz_A 1101 SSTS---------------ADKTAKIWSF-----------------DLLSPLHELKGHNGCVRCSAFSLDGILLATGDDN 1148 (1249)
T ss_dssp EEEC---------------CSSCCCEECS-----------------SSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETT
T ss_pred EEEc---------------CCCcEEEEEC-----------------CCcceeeeeccCCCcEEEEEECCCCCEEEEEeCC
Confidence 8766 2336777787 333 445666667778999999999999887765
Q ss_pred CCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEE
Q 004149 338 SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 417 (771)
Q Consensus 338 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~ 417 (771)
. .|.+||+.+++.......... ..... .+...+..++|||||+.|+... + .+..
T Consensus 1149 g-----------~i~vwd~~~~~~~~~~~~~~~---------~~~~~-~~~~~v~~l~fs~dg~~l~s~~---g--~v~v 1202 (1249)
T 3sfz_A 1149 G-----------EIRIWNVSDGQLLHSCAPISV---------EEGTA-THGGWVTDVCFSPDSKTLVSAG---G--YLKW 1202 (1249)
T ss_dssp S-----------CCCEEESSSSCCCCCCCCCC-----------------CCSCCCEEEECTTSSCEEEES---S--SEEE
T ss_pred C-----------EEEEEECCCCceEEEeccccc---------ccccc-ccCceEEEEEECCCCCEEEECC---C--eEEE
Confidence 3 488899888765332111000 00000 0122466789999999775442 3 4556
Q ss_pred EECCCCcEEEecC-CCCCceeeEEeecCCEEEEEE
Q 004149 418 VNVSSGELLRITP-AESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 418 ~d~~tg~~~~l~~-~~~~~~~~~~s~d~~~l~~~~ 451 (771)
+|+.+|+...... ....+....|++|++.++...
T Consensus 1203 wd~~~g~~~~~~~~~~~~i~~~~~s~dg~~l~~~~ 1237 (1249)
T 3sfz_A 1203 WNVATGDSSQTFYTNGTNLKKIHVSPDFRTYVTVD 1237 (1249)
T ss_dssp BCSSSCBCCCCCCCSSCCCCCCEECSSSCCEEEEC
T ss_pred EECCCCceeeeeeccCCcccEEEECCCCCEEEEec
Confidence 6777776544332 233445578999998777644
No 299
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.29 E-value=1.1e-10 Score=122.62 Aligned_cols=248 Identities=11% Similarity=0.065 Sum_probs=138.7
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEec-CCcccccccCCCcccceeecCCCCeEEEEecCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 175 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~ 175 (771)
..+...+|||+|+.++..+... .+.+|+ .++..+.+.. ... +.+++|||||+.|+..+.+..
T Consensus 77 ~~V~~~~~~~~~~~l~s~s~D~-----~v~lwd~~~~~~~~~~~~h~~~----------v~~v~~sp~~~~l~s~~~d~~ 141 (343)
T 2xzm_R 77 HFVSDLALSQENCFAISSSWDK-----TLRLWDLRTGTTYKRFVGHQSE----------VYSVAFSPDNRQILSAGAERE 141 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTS-----EEEEEETTSSCEEEEEECCCSC----------EEEEEECSSTTEEEEEETTSC
T ss_pred CceEEEEECCCCCEEEEEcCCC-----cEEEEECCCCcEEEEEcCCCCc----------EEEEEECCCCCEEEEEcCCCE
Confidence 4578899999999998765543 566773 3333322221 222 268999999999998876654
Q ss_pred CCCCCccCCCCCC--CCCCccCCCCCCcccccCCc----------CcccCCccCceEEEEEccCCceeeccCCCCCCccc
Q 004149 176 PSKPTFSLGSTKG--GSSDKDCNSWKGQGDWEEDW----------GETYAGKRQPSLFVININSGEVQAVKGIPKSLSVG 243 (771)
Q Consensus 176 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~----------g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~ 243 (771)
.+ .|+...... ......+..+.....|.++. ...+++.....|.+||........+ ......+.
T Consensus 142 i~--~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~--~~h~~~v~ 217 (343)
T 2xzm_R 142 IK--LWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTF--KAHESNVN 217 (343)
T ss_dssp EE--EEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEE--ECCSSCEE
T ss_pred EE--EEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEE--cCccccce
Confidence 33 333211000 00111223333344555553 2234445568899999654444444 33445688
Q ss_pred eEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCcccccee
Q 004149 244 QVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPR 323 (771)
Q Consensus 244 ~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~ 323 (771)
.++|+|||+. |+..+ .+..|.++|+. ..............+...+
T Consensus 218 ~~~~s~~g~~----l~sgs---------------~dg~v~iwd~~----------------~~~~~~~~~~~~~~v~~v~ 262 (343)
T 2xzm_R 218 HLSISPNGKY----IATGG---------------KDKKLLIWDIL----------------NLTYPQREFDAGSTINQIA 262 (343)
T ss_dssp EEEECTTSSE----EEEEE---------------TTCEEEEEESS----------------CCSSCSEEEECSSCEEEEE
T ss_pred EEEECCCCCE----EEEEc---------------CCCeEEEEECC----------------CCcccceeecCCCcEEEEE
Confidence 8999999997 77665 33468888861 1222222222334578899
Q ss_pred ecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEE
Q 004149 324 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTM 403 (771)
Q Consensus 324 ~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l 403 (771)
|||||+.|+.. .+ ..|.+||+.++....+..-. ...+... ....+ +...+..++|+|||+.|
T Consensus 263 ~sp~~~~la~~-~d-----------~~v~iw~~~~~~~~~~~~~~--~~~~~~~---~~~~~-~~~~v~~~~~sp~g~~l 324 (343)
T 2xzm_R 263 FNPKLQWVAVG-TD-----------QGVKIFNLMTQSKAPVCTIE--AEPITKA---EGQKG-KNPQCTSLAWNALGKKL 324 (343)
T ss_dssp ECSSSCEEEEE-ES-----------SCEEEEESSSCCSCSEEECC--CCSGGGB---TTBCC-SCCCEEEEEECSSSCCE
T ss_pred ECCCCCEEEEE-CC-----------CCEEEEEeCCCCCCceEEee--cCcchhh---hhhcC-CCCceEEEEECCCCCeE
Confidence 99999877543 33 23788888776543210000 0000000 00000 11124567899999866
Q ss_pred EEEeeeCCeeEEEEEE
Q 004149 404 LLSSIWGSSQVIISVN 419 (771)
Q Consensus 404 ~~~~~~~~~~~l~~~d 419 (771)
++...++...+|.++
T Consensus 325 -~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 325 -FAGFTDGVIRTFSFE 339 (343)
T ss_dssp -EEEETTSEEEEEEEE
T ss_pred -EEecCCceEEEEEEE
Confidence 555667777777654
No 300
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=99.29 E-value=2.9e-12 Score=132.17 Aligned_cols=215 Identities=14% Similarity=0.083 Sum_probs=124.7
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCc-ch-HHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccch
Q 004149 520 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV 597 (771)
Q Consensus 520 ~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~-~~-~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~ 597 (771)
.+...++.|.... .+..+.||++||...+. .. |. .....|+++||.|+++|+||. |... .....
T Consensus 15 ~l~~~i~~p~~~~-~~~~~~VvllHG~~~~~--~~~~~~~l~~~L~~~G~~v~~~d~~g~---g~~~--------~~~~~ 80 (317)
T 1tca_A 15 VLDAGLTCQGASP-SSVSKPILLVPGTGTTG--PQSFDSNWIPLSTQLGYTPCWISPPPF---MLND--------TQVNT 80 (317)
T ss_dssp HHHHTEEETTBCT-TSCSSEEEEECCTTCCH--HHHHTTTHHHHHHTTTCEEEEECCTTT---TCSC--------HHHHH
T ss_pred HHhheeeCCCCCC-CCCCCeEEEECCCCCCc--chhhHHHHHHHHHhCCCEEEEECCCCC---CCCc--------HHHHH
Confidence 3445577776543 23446799999976542 22 55 677889899999999999983 3211 01235
Q ss_pred hhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCC---CceeEEEecCCccchhhhhcCCCCCcchhhhhccCC
Q 004149 598 NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSK 674 (771)
Q Consensus 598 ~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p---~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 674 (771)
+++.+.++++.+.. +.+++.|+||||||.++..++..++ ++++++|+.+|.......... ...+...
T Consensus 81 ~~l~~~i~~~~~~~--g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~~~--------~~~~~~~ 150 (317)
T 1tca_A 81 EYMVNAITALYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGP--------LDALAVS 150 (317)
T ss_dssp HHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHH--------HHHTTCB
T ss_pred HHHHHHHHHHHHHh--CCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcchhh--------hhhhhhc
Confidence 67788888887763 3478999999999999999888765 789999999886532211100 0000000
Q ss_pred CCCcCCCCCChhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHH--HHHHHHHHHhCCCCEEEEEe-------CCC
Q 004149 675 GKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSN--GLQYARALREKGVETKVIVF-------PND 745 (771)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~--~~~~~~~l~~~g~~~~~~~~-------~~~ 745 (771)
................+.... .....+|+++++|+.|.+|++.. +......+.. .+.+.+ ++.
T Consensus 151 ~~~~~~~~~~s~f~~~L~~~~----~~~~~vp~~~i~g~~D~iV~p~~~~g~~~~~~l~~----a~~~~~~~~~~~~~~~ 222 (317)
T 1tca_A 151 APSVWQQTTGSALTTALRNAG----GLTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLFN----GKNVQAQAVCGPLFVI 222 (317)
T ss_dssp CHHHHHTBTTCHHHHHHHHTT----TTBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCBT----SEEEEHHHHHCTTCCC
T ss_pred CchHHhhCcCcHHHHHHHhcC----CCCCCCCEEEEEeCCCCeECCccccccchhhhccC----CccEEeeeccCCCCcc
Confidence 000000000001111111110 01236899999999999998765 2111111211 122222 477
Q ss_pred CccCCCCCChHHHHHHHHHHHHH
Q 004149 746 VHGIERPQSDFESFLNIGLWFKK 768 (771)
Q Consensus 746 ~H~~~~~~~~~~~~~~i~~wl~~ 768 (771)
+|.... .+ .+.+..+++||+.
T Consensus 223 gH~~~l-~~-p~~~~~v~~~L~~ 243 (317)
T 1tca_A 223 DHAGSL-TS-QFSYVVGRSALRS 243 (317)
T ss_dssp CTTHHH-HB-HHHHHHHHHHHHC
T ss_pred Cccccc-CC-HHHHHHHHHHhcC
Confidence 896432 22 3467788888874
No 301
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.29 E-value=3.8e-10 Score=121.45 Aligned_cols=273 Identities=14% Similarity=0.110 Sum_probs=163.4
Q ss_pred EEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcce
Q 004149 59 SISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLE 136 (771)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~ 136 (771)
.++...+......+.+.+|++..+ ...++.... ....+...+|||||+.|+.....+ .+.+| ..++..
T Consensus 100 ~~s~~~l~~~~~d~~v~lw~~~~~--~~~~~~~~~---~~~~v~~v~~s~~~~~l~~~~~dg-----~i~iwd~~~~~~~ 169 (401)
T 4aez_A 100 DWSNLNVVAVALERNVYVWNADSG--SVSALAETD---ESTYVASVKWSHDGSFLSVGLGNG-----LVDIYDVESQTKL 169 (401)
T ss_dssp EECTTSEEEEEETTEEEEEETTTC--CEEEEEECC---TTCCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEE
T ss_pred eecCCCEEEEECCCeEEEeeCCCC--cEeEeeecC---CCCCEEEEEECCCCCEEEEECCCC-----eEEEEECcCCeEE
Confidence 333333334444567888776433 333322221 124588999999999998876543 34555 233333
Q ss_pred EEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCcc
Q 004149 137 KEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKR 216 (771)
Q Consensus 137 ~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~ 216 (771)
+.... ..+ .+.+++| +++.|+..+.
T Consensus 170 ~~~~~---~~~------~v~~~~~--~~~~l~~~~~-------------------------------------------- 194 (401)
T 4aez_A 170 RTMAG---HQA------RVGCLSW--NRHVLSSGSR-------------------------------------------- 194 (401)
T ss_dssp EEECC---CSS------CEEEEEE--ETTEEEEEET--------------------------------------------
T ss_pred EEecC---CCC------ceEEEEE--CCCEEEEEcC--------------------------------------------
Confidence 33221 111 1257788 5666666432
Q ss_pred CceEEEEEccC-Cc-eeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchh
Q 004149 217 QPSLFVININS-GE-VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 294 (771)
Q Consensus 217 ~~~l~v~d~~~-~~-~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 294 (771)
...|.+||+.. +. ...+ ......+..+.|+|||+. |+..+ .+..|.++|+
T Consensus 195 dg~i~i~d~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~----l~s~~---------------~d~~v~iwd~------- 246 (401)
T 4aez_A 195 SGAIHHHDVRIANHQIGTL--QGHSSEVCGLAWRSDGLQ----LASGG---------------NDNVVQIWDA------- 246 (401)
T ss_dssp TSEEEEEETTSSSCEEEEE--ECCSSCEEEEEECTTSSE----EEEEE---------------TTSCEEEEET-------
T ss_pred CCCEEEEecccCcceeeEE--cCCCCCeeEEEEcCCCCE----EEEEe---------------CCCeEEEccC-------
Confidence 36889999974 33 3334 344557888999999987 77665 2347888998
Q ss_pred hhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEe
Q 004149 295 SELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIP 373 (771)
Q Consensus 295 ~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 373 (771)
.+++ ...+..+...+....|+|+|+.++...... ....|.+||+.+++.....
T Consensus 247 ----------~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs--------~d~~i~i~d~~~~~~~~~~-------- 300 (401)
T 4aez_A 247 ----------RSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGT--------MDKQIHFWNAATGARVNTV-------- 300 (401)
T ss_dssp ----------TCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCT--------TTCEEEEEETTTCCEEEEE--------
T ss_pred ----------CCCCccEEecCCcceEEEEEECCCCCCEEEEecCC--------CCCEEEEEECCCCCEEEEE--------
Confidence 4444 445666677789999999998887765311 1246999998876542111
Q ss_pred cccccCCCCCcccccCCCCCCccccCCCEEEEEee-eCCeeEEEEEECCCCcEEEe---cCCCCCceeeEEeecCCEEEE
Q 004149 374 VVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI-WGSSQVIISVNVSSGELLRI---TPAESNFSWSLLTLDGDNIIA 449 (771)
Q Consensus 374 ~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~-~~~~~~l~~~d~~tg~~~~l---~~~~~~~~~~~~s~d~~~l~~ 449 (771)
.. ...+..++|+||++.|+.+.. .++...+| ++.+++...+ ......+....|+++++.|+.
T Consensus 301 --~~----------~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~--~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s 366 (401)
T 4aez_A 301 --DA----------GSQVTSLIWSPHSKEIMSTHGFPDNNLSIW--SYSSSGLTKQVDIPAHDTRVLYSALSPDGRILST 366 (401)
T ss_dssp --EC----------SSCEEEEEECSSSSEEEEEECTTTCEEEEE--EEETTEEEEEEEEECCSSCCCEEEECTTSSEEEE
T ss_pred --eC----------CCcEEEEEECCCCCeEEEEeecCCCcEEEE--ecCCccceeEEEecCCCCCEEEEEECCCCCEEEE
Confidence 00 012457789999997766542 45555555 4446554443 333344566789999987765
Q ss_pred EEeCCCCCCeEEEEEeccc
Q 004149 450 VSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 450 ~~s~~~~p~~l~~~~~~~~ 468 (771)
...+ ..|.+.++.++
T Consensus 367 ~~~d----g~i~iw~~~~~ 381 (401)
T 4aez_A 367 AASD----ENLKFWRVYDG 381 (401)
T ss_dssp ECTT----SEEEEEECCC-
T ss_pred EeCC----CcEEEEECCCC
Confidence 5432 35667666544
No 302
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.29 E-value=7.4e-11 Score=124.65 Aligned_cols=261 Identities=13% Similarity=0.048 Sum_probs=147.9
Q ss_pred cceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCC-----cceEEEecCC
Q 004149 69 KRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS-----QLEKEFHVPQ 143 (771)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 143 (771)
...+.+.+|+..... ....+... ...+...+|||||+.+|.....+ ...+|.+.... ..........
T Consensus 83 s~Dg~v~vWd~~~~~-~~~~~~~~-----~~~v~~~~~sp~g~~lasg~~d~--~i~v~~~~~~~~~~~~~~~~~~~~h~ 154 (354)
T 2pbi_B 83 SQDGKVIVWDSFTTN-KEHAVTMP-----CTWVMACAYAPSGCAIACGGLDN--KCSVYPLTFDKNENMAAKKKSVAMHT 154 (354)
T ss_dssp ETTSEEEEEETTTCC-EEEEEECS-----SSCCCEEEECTTSSEEEEESTTS--EEEEEECCCCTTCCSGGGCEEEEECS
T ss_pred eCCCeEEEEECCCCC-cceEEecC-----CCCEEEEEECCCCCEEEEeeCCC--CEEEEEEeccccccccccceeeeccC
Confidence 445677777753221 12222211 14578899999999998764432 22233322110 1111221111
Q ss_pred cccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccC--CcCcccCCccCceEE
Q 004149 144 TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE--DWGETYAGKRQPSLF 221 (771)
Q Consensus 144 ~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~g~~~~~~~~~~l~ 221 (771)
+.+..++|+||++.|+..+.+...+ .|+............+........+.+ +....+++..+..|.
T Consensus 155 ---------~~v~~~~~~~~~~~l~t~s~D~~v~--lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~ 223 (354)
T 2pbi_B 155 ---------NYLSACSFTNSDMQILTASGDGTCA--LWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAM 223 (354)
T ss_dssp ---------SCEEEEEECSSSSEEEEEETTSEEE--EEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEE
T ss_pred ---------CcEEEEEEeCCCCEEEEEeCCCcEE--EEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEE
Confidence 1236899999999999887765432 343322211111112222222233433 333455566678999
Q ss_pred EEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhc
Q 004149 222 VININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKE 301 (771)
Q Consensus 222 v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 301 (771)
+||+.+++..... ......+..++|+|||+. |+..+ .+..|.++|+
T Consensus 224 ~wd~~~~~~~~~~-~~h~~~v~~v~~~p~~~~----l~s~s---------------~D~~v~lwd~-------------- 269 (354)
T 2pbi_B 224 VWDMRSGQCVQAF-ETHESDVNSVRYYPSGDA----FASGS---------------DDATCRLYDL-------------- 269 (354)
T ss_dssp EEETTTCCEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------TTSCEEEEET--------------
T ss_pred EEECCCCcEEEEe-cCCCCCeEEEEEeCCCCE----EEEEe---------------CCCeEEEEEC--------------
Confidence 9999988765541 334556889999999987 77665 2336778887
Q ss_pred CCCCCCcc-eecCCC--CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEeccccc
Q 004149 302 SSSEDLPV-VNLTES--ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCA 378 (771)
Q Consensus 302 ~~~~~~~~-~~lt~~--~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 378 (771)
..+.. ..+... ...+....|||||+.|+..+.+ ..|.+||+.++.......+
T Consensus 270 ---~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-----------~~i~vwd~~~~~~~~~l~~----------- 324 (354)
T 2pbi_B 270 ---RADREVAIYSKESIIFGASSVDFSLSGRLLFAGYND-----------YTINVWDVLKGSRVSILFG----------- 324 (354)
T ss_dssp ---TTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-----------SCEEEEETTTCSEEEEECC-----------
T ss_pred ---CCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECC-----------CcEEEEECCCCceEEEEEC-----------
Confidence 33332 222222 2246788999999988776654 3588999876553211000
Q ss_pred CCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 004149 379 EGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 416 (771)
Q Consensus 379 ~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~ 416 (771)
+...+..++|+|||+.| ++.+.++...||
T Consensus 325 --------h~~~v~~l~~spdg~~l-~sgs~D~~v~vW 353 (354)
T 2pbi_B 325 --------HENRVSTLRVSPDGTAF-CSGSWDHTLRVW 353 (354)
T ss_dssp --------CSSCEEEEEECTTSSCE-EEEETTSEEEEE
T ss_pred --------CCCcEEEEEECCCCCEE-EEEcCCCCEEec
Confidence 11134567899999855 566667777776
No 303
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.28 E-value=3.9e-11 Score=141.99 Aligned_cols=263 Identities=9% Similarity=0.023 Sum_probs=162.7
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
+.+...+|||||++||+....+ .+.+|+ .+...+...... + .+.++.|||||++|+..+.+...
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~g-----~v~iwd~~~~~~~~~~~~~~---~------~v~~~~~s~~~~~l~~~~~dg~i 79 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYSG-----RVEIWNYETQVEVRSIQVTE---T------PVRAGKFIARKNWIIVGSDDFRI 79 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----EEEEEETTTTEEEEEEECCS---S------CEEEEEEEGGGTEEEEEETTSEE
T ss_pred CceEEEEECCCCCEEEEEeCCC-----EEEEEECCCCceEEEEecCC---C------cEEEEEEeCCCCEEEEEeCCCeE
Confidence 4588899999999999876543 556663 333333333211 1 12699999999999998775432
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCC-ceeeccCCCCCCccceEEEec-CCCCC
Q 004149 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG-EVQAVKGIPKSLSVGQVVWAP-LNEGL 254 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~-~~~~l~~~~~~~~~~~~~wsp-Dg~~~ 254 (771)
. .|+............+........|+++....+++.....|.+||+.++ ...... ......+..+.|+| |++.
T Consensus 80 ~--vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~- 155 (814)
T 3mkq_A 80 R--VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF-EGHEHFVMCVAFNPKDPST- 155 (814)
T ss_dssp E--EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEE-ECCSSCEEEEEEETTEEEE-
T ss_pred E--EEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEE-cCCCCcEEEEEEEcCCCCE-
Confidence 2 3333222222222234444456778888666667777889999999887 333331 33445688899999 7776
Q ss_pred ccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCC-CccccceeecC--CCCE
Q 004149 255 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTES-ISSAFFPRFSP--DGKF 330 (771)
Q Consensus 255 ~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~-~~~~~~p~~Sp--DG~~ 330 (771)
|+..+ ....|+++|+ .++. ...+... ...+..+.|+| ||+.
T Consensus 156 ---l~~~~---------------~dg~v~vwd~-----------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 200 (814)
T 3mkq_A 156 ---FASGC---------------LDRTVKVWSL-----------------GQSTPNFTLTTGQERGVNYVDYYPLPDKPY 200 (814)
T ss_dssp ---EEEEE---------------TTSEEEEEET-----------------TCSSCSEEEECCCTTCCCEEEECCSTTCCE
T ss_pred ---EEEEe---------------CCCeEEEEEC-----------------CCCcceeEEecCCCCCEEEEEEEECCCCCE
Confidence 66654 3347888887 3333 3333333 35688899999 9998
Q ss_pred EEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeC
Q 004149 331 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG 410 (771)
Q Consensus 331 l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~ 410 (771)
|+..+.+ ..|.+||+.+++.... +.. +...+..++|+|||+.|+ +...+
T Consensus 201 l~~~~~d-----------g~i~~~d~~~~~~~~~----------~~~---------~~~~v~~~~~~~~~~~l~-~~~~d 249 (814)
T 3mkq_A 201 MITASDD-----------LTIKIWDYQTKSCVAT----------LEG---------HMSNVSFAVFHPTLPIII-SGSED 249 (814)
T ss_dssp EEEECTT-----------SEEEEEETTTTEEEEE----------EEC---------CSSCEEEEEECSSSSEEE-EEETT
T ss_pred EEEEeCC-----------CEEEEEECCCCcEEEE----------EcC---------CCCCEEEEEEcCCCCEEE-EEeCC
Confidence 8876654 3588899876543111 100 011245678999998554 44445
Q ss_pred CeeEEEEEECCCCcEEEecC-CCCCceeeEEeecCCEE
Q 004149 411 SSQVIISVNVSSGELLRITP-AESNFSWSLLTLDGDNI 447 (771)
Q Consensus 411 ~~~~l~~~d~~tg~~~~l~~-~~~~~~~~~~s~d~~~l 447 (771)
+.. ..+|+.+++...... ....+....+++++..+
T Consensus 250 g~v--~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 285 (814)
T 3mkq_A 250 GTL--KIWNSSTYKVEKTLNVGLERSWCIATHPTGRKN 285 (814)
T ss_dssp SCE--EEEETTTCSEEEEECCSSSSEEEEEECTTCGGG
T ss_pred CeE--EEEECCCCcEEEEeecCCCcEEEEEEccCCCce
Confidence 554 445787777654433 33345556778887754
No 304
>2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A
Probab=99.28 E-value=2.8e-12 Score=127.58 Aligned_cols=208 Identities=15% Similarity=0.160 Sum_probs=111.4
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCC
Q 004149 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 614 (771)
...+.||++||.+.. ...|...+..|+ .+|.|+++|+|| +|.+.. ...+|+.+.++.+.+.-.+.
T Consensus 11 ~~~~~lv~lhg~g~~--~~~~~~~~~~L~-~~~~vi~~Dl~G---hG~S~~---------~~~~~~~~~~~~~~~~l~~~ 75 (242)
T 2k2q_B 11 SEKTQLICFPFAGGY--SASFRPLHAFLQ-GECEMLAAEPPG---HGTNQT---------SAIEDLEELTDLYKQELNLR 75 (242)
T ss_dssp TCCCEEESSCCCCHH--HHHHHHHHHHHC-CSCCCEEEECCS---SCCSCC---------CTTTHHHHHHHHTTTTCCCC
T ss_pred CCCceEEEECCCCCC--HHHHHHHHHhCC-CCeEEEEEeCCC---CCCCCC---------CCcCCHHHHHHHHHHHHHhh
Confidence 345679999996654 346777777775 479999999999 444311 12456666666655432222
Q ss_pred -CCeEEEEEcChhHHHHHHHHHh------CCCceeEEEecCCccchhhhhcCCCCCcchhhhhccC-CCC-Cc------C
Q 004149 615 -PSKVTVVGGSHGGFLTTHLIGQ------APDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGS-KGK-DS------F 679 (771)
Q Consensus 615 -~~ri~l~G~S~GG~~a~~~a~~------~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~------~ 679 (771)
.+++.|+||||||.+|+.+|.+ +|+.+-......|...... ........+...+.. ... .. .
T Consensus 76 ~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~v~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (242)
T 2k2q_B 76 PDRPFVLFGHSMGGMITFRLAQKLEREGIFPQAVIISAIQPPHIQRKK---VSHLPDDQFLDHIIQLGGMPAELVENKEV 152 (242)
T ss_dssp CCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCSEEEEEEECSCCCSCC---CSSCTTHHHHHTTCCTTCCCCTTTHHHHT
T ss_pred cCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCEEEEECCCCCCCCccc---ccCCCHHHHHHHHHHhCCCChHHhcCHHH
Confidence 2689999999999999999976 5665321111111111000 000000000000000 000 00 0
Q ss_pred CC--CCC-hhhHHHHhhcCccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChH
Q 004149 680 TE--SPS-VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDF 756 (771)
Q Consensus 680 ~~--~~~-~~~~~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~ 756 (771)
.. .+. ............ ..+.++++|+|+++|++|..++ ..... +.+.-...+++++++ ||..... ...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~-~~l~~i~~P~lvi~G~~D~~~~-~~~~~----~~~~~~~~~~~~~~~-gH~~~~e-~p~ 224 (242)
T 2k2q_B 153 MSFFLPSFRSDYRALEQFEL-YDLAQIQSPVHVFNGLDDKKCI-RDAEG----WKKWAKDITFHQFDG-GHMFLLS-QTE 224 (242)
T ss_dssp TTTCCSCHHHHHHHHTCCCC-SCCTTCCCSEEEEEECSSCCHH-HHHHH----HHTTCCCSEEEEEEC-CCSHHHH-HCH
T ss_pred HHHHHHHHHHHHHHHHhccc-CCCCccCCCEEEEeeCCCCcCH-HHHHH----HHHHhcCCeEEEEeC-CceeEcC-CHH
Confidence 00 000 011111111111 1256789999999999998864 22222 333222345777775 8976533 345
Q ss_pred HHHHHHHHHHHH
Q 004149 757 ESFLNIGLWFKK 768 (771)
Q Consensus 757 ~~~~~i~~wl~~ 768 (771)
++.+.+.+||++
T Consensus 225 ~~~~~i~~fl~~ 236 (242)
T 2k2q_B 225 EVAERIFAILNQ 236 (242)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHhhc
Confidence 778889999875
No 305
>3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus}
Probab=99.27 E-value=2e-11 Score=123.31 Aligned_cols=211 Identities=13% Similarity=0.061 Sum_probs=113.7
Q ss_pred CCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCC
Q 004149 534 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 613 (771)
Q Consensus 534 ~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~ 613 (771)
.+..+.||++||++.. ...|...+. | ..+|.|+++|+||. +.+.. . ...++++.+.+..+++.. .
T Consensus 18 ~~~~~~lv~lhg~~~~--~~~~~~~~~-l-~~~~~v~~~d~~G~---~~~~~---~----~~~~~~~~~~~~~~i~~~-~ 82 (265)
T 3ils_A 18 MVARKTLFMLPDGGGS--AFSYASLPR-L-KSDTAVVGLNCPYA---RDPEN---M----NCTHGAMIESFCNEIRRR-Q 82 (265)
T ss_dssp TTSSEEEEEECCTTCC--GGGGTTSCC-C-SSSEEEEEEECTTT---TCGGG---C----CCCHHHHHHHHHHHHHHH-C
T ss_pred CCCCCEEEEECCCCCC--HHHHHHHHh-c-CCCCEEEEEECCCC---CCCCC---C----CCCHHHHHHHHHHHHHHh-C
Confidence 3456889999997765 335655555 5 67899999999994 22210 1 123444433332222221 1
Q ss_pred CCCeEEEEEcChhHHHHHHHHH---hCCCceeEEEecCCccchhhhhcCCCCCc--chhhhhccCCCC----C--cCCCC
Q 004149 614 NPSKVTVVGGSHGGFLTTHLIG---QAPDKFVAAAARNPLCNLALMVGTTDIPD--WCYVESYGSKGK----D--SFTES 682 (771)
Q Consensus 614 d~~ri~l~G~S~GG~~a~~~a~---~~p~~~~a~v~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~----~--~~~~~ 682 (771)
...++.|+||||||.+++.++. .+++.++++|+.++...... ...+. ..+......... . .-...
T Consensus 83 ~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (265)
T 3ils_A 83 PRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAM----EQLPRAFYEHCNSIGLFATQPGASPDGSTEP 158 (265)
T ss_dssp SSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCC----CCCCHHHHHHHHHTTTTTTSSSSCSSSCSCC
T ss_pred CCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcc----cccCHHHHHHHHHHHHhCCCccccccCCHHH
Confidence 2358999999999999999987 66888999888876432100 00000 000111000000 0 00000
Q ss_pred CCh------hhHHHHhhcCccccccCCCCcEE-EEeeCC---CCccC--------------cHHHHHHHHHHHhCCCCEE
Q 004149 683 PSV------EDLTRFHSKSPISHISKVKTPTI-FLLGAQ---DLRVP--------------VSNGLQYARALREKGVETK 738 (771)
Q Consensus 683 ~~~------~~~~~~~~~sp~~~~~~i~~P~L-ii~G~~---D~~vp--------------~~~~~~~~~~l~~~g~~~~ 738 (771)
... .+......+.+ ....++++|++ +++|++ |..++ ......+.+.+. +.+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~--~~~~~ 235 (265)
T 3ils_A 159 PSYLIPHFTAVVDVMLDYKL-APLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMP--GASFD 235 (265)
T ss_dssp CTTHHHHHHHHHHHTTTCCC-CCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHST--TCCEE
T ss_pred HHHHHHHHHHHHHHHHhcCC-CCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhCC--cccee
Confidence 000 00111111111 12346889977 999999 99883 332233333222 13689
Q ss_pred EEEeCCCCccCCC-CCChHHHHHHHHHHH
Q 004149 739 VIVFPNDVHGIER-PQSDFESFLNIGLWF 766 (771)
Q Consensus 739 ~~~~~~~~H~~~~-~~~~~~~~~~i~~wl 766 (771)
+++++++||.+.. .+...++.+.|.+||
T Consensus 236 ~~~i~gagH~~~~~~e~~~~v~~~i~~fL 264 (265)
T 3ils_A 236 IVRADGANHFTLMQKEHVSIISDLIDRVM 264 (265)
T ss_dssp EEEEEEEETTGGGSTTTTHHHHHHHHHHT
T ss_pred EEEcCCCCcceeeChhhHHHHHHHHHHHh
Confidence 9999999997662 334445555555554
No 306
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.27 E-value=1.3e-10 Score=120.29 Aligned_cols=273 Identities=13% Similarity=0.064 Sum_probs=155.2
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEE
Q 004149 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 128 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 128 (771)
.++||+.|+... ..+.+.+|++... .....+.. ....+...+|||||+.|+.....+ .+.
T Consensus 31 ~s~~~~~l~s~~---------~dg~i~iw~~~~~-~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~~~d~-----~i~ 90 (312)
T 4ery_A 31 FSPNGEWLASSS---------ADKLIKIWGAYDG-KFEKTISG-----HKLGISDVAWSSDSNLLVSASDDK-----TLK 90 (312)
T ss_dssp ECTTSSEEEEEE---------TTSCEEEEETTTC-CEEEEECC-----CSSCEEEEEECTTSSEEEEEETTS-----EEE
T ss_pred ECCCCCEEEEee---------CCCeEEEEeCCCc-ccchhhcc-----CCCceEEEEEcCCCCEEEEECCCC-----EEE
Confidence 356777766543 2345666655322 11122211 124578899999999998876543 556
Q ss_pred Eec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccC
Q 004149 129 LWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE 206 (771)
Q Consensus 129 ~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (771)
+|+ .++....+..... .+..+.|+||++.|+..+.+...+ .|+............+........|.+
T Consensus 91 vwd~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~s~~~d~~i~--iwd~~~~~~~~~~~~~~~~v~~~~~~~ 159 (312)
T 4ery_A 91 IWDVSSGKCLKTLKGHSN---------YVFCCNFNPQSNLIVSGSFDESVR--IWDVKTGKCLKTLPAHSDPVSAVHFNR 159 (312)
T ss_dssp EEETTTCCEEEEEECCSS---------CEEEEEECSSSSEEEEEETTSCEE--EEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred EEECCCCcEEEEEcCCCC---------CEEEEEEcCCCCEEEEEeCCCcEE--EEECCCCEEEEEecCCCCcEEEEEEcC
Confidence 663 3333333322111 125889999999998887665432 333222211111222233334566788
Q ss_pred CcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEe
Q 004149 207 DWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVR 286 (771)
Q Consensus 207 d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d 286 (771)
+....+++.....|.+||+.+++............+..+.|+|||+. |+..+ .+..|.++|
T Consensus 160 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~---------------~d~~i~iwd 220 (312)
T 4ery_A 160 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY----ILAAT---------------LDNTLKLWD 220 (312)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSE----EEEEE---------------TTTEEEEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCE----EEEEc---------------CCCeEEEEE
Confidence 76666667778899999998877543311223345677899999997 77665 234788888
Q ss_pred cccccchhhhhhhhcCCCCCCc-ceecCCCCcc--ccceeec-CCCCEEEEEecCCCCCCCCccccccceeeecCCCCCC
Q 004149 287 VSLYKSEASELELKESSSEDLP-VVNLTESISS--AFFPRFS-PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF 362 (771)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~--~~~p~~S-pDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~ 362 (771)
+ ..++ ...+..+... .....|+ ++|+.|+..+.+ ..|++||+.+++..
T Consensus 221 ~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-----------g~i~vwd~~~~~~~ 272 (312)
T 4ery_A 221 Y-----------------SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED-----------NLVYIWNLQTKEIV 272 (312)
T ss_dssp T-----------------TTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTT-----------SCEEEEETTTCCEE
T ss_pred C-----------------CCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCC-----------CEEEEEECCCchhh
Confidence 7 4444 3334333222 2233455 567766654433 35899998876532
Q ss_pred CCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEee-eCCeeEEEEE
Q 004149 363 SSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI-WGSSQVIISV 418 (771)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~-~~~~~~l~~~ 418 (771)
....+. ...+..++|+|++..|+..+. .++...+|..
T Consensus 273 ~~~~~h-------------------~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 273 QKLQGH-------------------TDVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp EEECCC-------------------SSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred hhhhcc-------------------CCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 111110 012346789999986654432 4566777754
No 307
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.27 E-value=2.8e-11 Score=130.82 Aligned_cols=292 Identities=15% Similarity=0.145 Sum_probs=163.9
Q ss_pred cceEEEeCCCCCeEEEEecCCC------CCCeEEEEe--cCCcce-EEEecCCcccccccCCCcccceeecCCCCeEEEE
Q 004149 100 GASAVVPSPSGSKLLVVRNPEN------ESPIQFELW--SQSQLE-KEFHVPQTVHGSVYADGWFEGISWNSDETLIAYV 170 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~------~~~~~~~~~--~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~ 170 (771)
.+...+|||||+.++++....+ .....+.+| ..+... .+.... . ...+.+++|||||+.|+..
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~--~------~~~v~~~~~s~~~~~l~~~ 85 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQ--V------DSKFNDLDWSHNNKIIAGA 85 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCC--C------SSCEEEEEECSSSSCEEEE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEe--c------CCceEEEEECCCCCeEEEE
Confidence 3667899999995555542221 112233344 222211 111111 1 1223699999999999988
Q ss_pred ecCCCCCCCCccCCCC----CCCCCCccCCCCCCcccccCC-cCcccCCccCceEEEEEccCCc------eeecc--CCC
Q 004149 171 AEEPSPSKPTFSLGST----KGGSSDKDCNSWKGQGDWEED-WGETYAGKRQPSLFVININSGE------VQAVK--GIP 237 (771)
Q Consensus 171 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~d-~g~~~~~~~~~~l~v~d~~~~~------~~~l~--~~~ 237 (771)
+.+.... .|+.... ........+........|.++ ....+++.....|++||+.+++ ..... ...
T Consensus 86 ~~dg~v~--vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 163 (416)
T 2pm9_A 86 LDNGSLE--LYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMS 163 (416)
T ss_dssp ESSSCEE--EECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCC
T ss_pred ccCCeEE--EeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccC
Confidence 7665432 3332221 111222334455566778888 4445556667899999998876 22110 012
Q ss_pred CCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eecCCC-
Q 004149 238 KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTES- 315 (771)
Q Consensus 238 ~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~- 315 (771)
....+..+.|+||+.. +++++. ....|.++|+ .+++. ..+...
T Consensus 164 ~~~~v~~~~~~~~~~~----~l~~~~--------------~dg~v~iwd~-----------------~~~~~~~~~~~~~ 208 (416)
T 2pm9_A 164 SVDEVISLAWNQSLAH----VFASAG--------------SSNFASIWDL-----------------KAKKEVIHLSYTS 208 (416)
T ss_dssp SSCCCCEEEECSSCTT----EEEEES--------------SSSCEEEEET-----------------TTTEEEEEECCCC
T ss_pred CCCCeeEEEeCCCCCc----EEEEEc--------------CCCCEEEEEC-----------------CCCCcceEEeccc
Confidence 3446789999999665 666542 2346888887 44443 334333
Q ss_pred -----CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCC-CCCcc-ceeeEEecccccCCCCCccccc
Q 004149 316 -----ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN-FSSLE-KIVDVIPVVQCAEGDCFPGLYS 388 (771)
Q Consensus 316 -----~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~-~~~~~-~~~~~~~~~~~~~~~~f~g~~~ 388 (771)
...+....|+|||+.+++....+ | ....|.+||+.++.. ..... .. .
T Consensus 209 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d----~---~~~~i~~~d~~~~~~~~~~~~~~~-------------------~ 262 (416)
T 2pm9_A 209 PNSGIKQQLSVVEWHPKNSTRVATATGS----D---NDPSILIWDLRNANTPLQTLNQGH-------------------Q 262 (416)
T ss_dssp CSSCCCCCEEEEEECSSCTTEEEEEECC----S---SSCCCCEEETTSTTSCSBCCCSCC-------------------S
T ss_pred cccccCCceEEEEECCCCCCEEEEEECC----C---CCceEEEEeCCCCCCCcEEeecCc-------------------c
Confidence 45688999999986444444332 1 123688999887532 11111 10 1
Q ss_pred CCCCCCcccc-CCCEEEEEeeeCCeeEEEEEECCCCcEEE-ecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEec
Q 004149 389 SSILSNPWLS-DGCTMLLSSIWGSSQVIISVNVSSGELLR-ITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 389 ~~~~~~~~s~-dg~~l~~~~~~~~~~~l~~~d~~tg~~~~-l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~ 466 (771)
..+..++|+| |++.| ++...++. |..+|+.+++... +......+....|++++..++++.+. -..+.+.++.
T Consensus 263 ~~v~~~~~s~~~~~~l-~s~~~dg~--v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~---d~~i~iw~~~ 336 (416)
T 2pm9_A 263 KGILSLDWCHQDEHLL-LSSGRDNT--VLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASF---DNKIEVQTLQ 336 (416)
T ss_dssp SCEEEEEECSSCSSCE-EEEESSSE--EEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCS---SSEEEEEESC
T ss_pred CceeEEEeCCCCCCeE-EEEeCCCC--EEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEec---CCcEEEEEcc
Confidence 1345678999 77644 55555555 4455777776544 44334445667899998444444432 2346666665
Q ss_pred cc
Q 004149 467 DK 468 (771)
Q Consensus 467 ~~ 468 (771)
..
T Consensus 337 ~~ 338 (416)
T 2pm9_A 337 NL 338 (416)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 308
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.27 E-value=2.1e-10 Score=120.91 Aligned_cols=293 Identities=9% Similarity=0.014 Sum_probs=157.3
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCC---CCeEEEEecCCCCCCe
Q 004149 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPS---GSKLLVVRNPENESPI 125 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPd---G~~la~~~~~~~~~~~ 125 (771)
.+|||..++.+.+.. ...+.+.+|++.... ...+.... ....+...+|+|+ |+.|+.....+
T Consensus 26 ~~p~~~~l~~~~s~~-----~~d~~v~iw~~~~~~--~~~~~~~~---~~~~v~~~~~~~~~~~~~~l~~~~~dg----- 90 (357)
T 3i2n_A 26 WVPCSAKFVTMGNFA-----RGTGVIQLYEIQHGD--LKLLREIE---KAKPIKCGTFGATSLQQRYLATGDFGG----- 90 (357)
T ss_dssp ECTTSSEEEEEEC-------CCCEEEEEEEECSSS--EEEEEEEE---ESSCEEEEECTTCCTTTCCEEEEETTS-----
T ss_pred EcCCCceEEEecCcc-----CCCcEEEEEeCCCCc--ccceeeec---ccCcEEEEEEcCCCCCCceEEEecCCC-----
Confidence 367787666554321 024677777775432 22121111 1245888999999 68887765443
Q ss_pred EEEEe--cCCc-ceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCC-CCCCCccCC----C
Q 004149 126 QFELW--SQSQ-LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTK-GGSSDKDCN----S 197 (771)
Q Consensus 126 ~~~~~--~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~ 197 (771)
.+.+| ..++ ........ .+.+..-.+...++|||||+.|+..+.+.... .|+..... ......... .
T Consensus 91 ~i~iwd~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~--vwd~~~~~~~~~~~~~~~~~~~~ 165 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSVKGH---KEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK--VWDPRQKDDPVANMEPVQGENKR 165 (357)
T ss_dssp CEEEECTTSCSSCSEEECCC---SSCEEEEEEESGGGCC-CCCEEEEEETTSCEE--EECTTSCSSCSEEECCCTTSCCC
T ss_pred eEEEEeCCCCCccEEEEEec---ccceEEEeeccccccCCCccEEEEEeCCCeEE--EEeCCCCCCcceeccccCCCCCC
Confidence 34555 2222 33332211 11110001112236899999999887665432 23322211 111110001 1
Q ss_pred CCCccc----ccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEec---CCCCCccEEEEEeecCcceee
Q 004149 198 WKGQGD----WEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP---LNEGLHQYLVFVGWSSETRKL 270 (771)
Q Consensus 198 ~~~~~~----~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wsp---Dg~~~~~~l~~~~~~~~~~~~ 270 (771)
...... |+++....+++.....|.+||+.+++.... ......+..+.|+| +++. |+..+
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~----l~~~~-------- 231 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE--TNIKNGVCSLEFDRKDISMNK----LVATS-------- 231 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE--EECSSCEEEEEESCSSSSCCE----EEEEE--------
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee--cCCCCceEEEEcCCCCCCCCE----EEEEC--------
Confidence 111222 556655555666678999999999987666 44455788999999 8886 66654
Q ss_pred eeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-cee-----cCCCCccccceeecCCCCEEEEEecCCCCCCCC
Q 004149 271 GIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVN-----LTESISSAFFPRFSPDGKFLVFLSAKSSVDSGA 344 (771)
Q Consensus 271 g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~-----lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~ 344 (771)
....|+++|+ .+++ ... +..+...+....|+|||+.+++....+
T Consensus 232 -------~dg~i~i~d~-----------------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------ 281 (357)
T 3i2n_A 232 -------LEGKFHVFDM-----------------RTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGA------ 281 (357)
T ss_dssp -------STTEEEEEEE-----------------EEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETT------
T ss_pred -------CCCeEEEEeC-----------------cCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCC------
Confidence 2336777776 2222 222 225666788999999999544444332
Q ss_pred ccccccceeeecCCCCCCCCccc---------eeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 004149 345 HSATDSLHRIDWPTNGNFSSLEK---------IVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 415 (771)
Q Consensus 345 ~~~~~~l~~~d~~~~~~~~~~~~---------~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l 415 (771)
..|.+||+..+........ .......+.. +...+..++|+|||+.|+++...++...+
T Consensus 282 ----g~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---------~~~~v~~~~~s~~~~~l~~s~~~d~~i~i 348 (357)
T 3i2n_A 282 ----GGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL---------STQPISSLDWSPDKRGLCVCSSFDQTVRV 348 (357)
T ss_dssp ----SEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC---------CSSCEEEEEECSSSTTEEEEEETTSEEEE
T ss_pred ----CcEEEeecCCCcccccccCCCCccccccccceeecccc---------CCCCeeEEEEcCCCCeEEEEecCCCcEEE
Confidence 3578888776543211100 0001111100 11235578899999988767777777677
Q ss_pred EEE
Q 004149 416 ISV 418 (771)
Q Consensus 416 ~~~ 418 (771)
|.+
T Consensus 349 w~~ 351 (357)
T 3i2n_A 349 LIV 351 (357)
T ss_dssp EEE
T ss_pred EEC
Confidence 644
No 309
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.26 E-value=6.7e-10 Score=124.03 Aligned_cols=267 Identities=9% Similarity=-0.012 Sum_probs=149.5
Q ss_pred cceEEEeCC----CCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCc-ccccccC-CCcccceeecCCCCeEEEEec
Q 004149 100 GASAVVPSP----SGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQT-VHGSVYA-DGWFEGISWNSDETLIAYVAE 172 (771)
Q Consensus 100 ~~~~~~~SP----dG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~wSpDg~~la~~~~ 172 (771)
.....+||| ||++|+...... .++.+++ ..++..+.+..... ..+..|- +.....+.+|||++.+++...
T Consensus 223 ~p~~va~sp~~~~dg~~l~v~~~~~---~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 223 EARSVESSKFKGYEDRYTIAGAYWP---PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEES---SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred CcceEEeCCCcCCCCCEEEEEEccC---CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 467889999 999986654322 2344444 34444444443110 0000000 112357889999987766432
Q ss_pred CCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCC
Q 004149 173 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 252 (771)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~ 252 (771)
....|+++|..+++...+..++....+..+.|+|||+
T Consensus 300 -------------------------------------------~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~ 336 (543)
T 1nir_A 300 -------------------------------------------ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHR 336 (543)
T ss_dssp -------------------------------------------TTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSC
T ss_pred -------------------------------------------CCCeEEEEEecCCCcceeEEeccCcCccCceECCCCC
Confidence 2368999998876532211022333566789999999
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCC-CC--cccccee-ecCCC
Q 004149 253 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SI--SSAFFPR-FSPDG 328 (771)
Q Consensus 253 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~--~~~~~p~-~SpDG 328 (771)
+ ++..+. ....|.++|+ .++++..... .. ....... ++||+
T Consensus 337 ~----l~va~~--------------~~~~v~v~D~-----------------~tg~l~~~i~~g~~ph~g~g~~~~~p~~ 381 (543)
T 1nir_A 337 Y----FMTAAN--------------NSNKVAVIDS-----------------KDRRLSALVDVGKTPHPGRGANFVHPKY 381 (543)
T ss_dssp E----EEEEEG--------------GGTEEEEEET-----------------TTTEEEEEEECSSSBCCTTCEEEEETTT
T ss_pred E----EEEEec--------------CCCeEEEEEC-----------------CCCeEEEeeccCCCCCCCCCcccCCCCC
Confidence 6 655442 2236888998 6665543222 11 1112233 47887
Q ss_pred CEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEee
Q 004149 329 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 408 (771)
Q Consensus 329 ~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~ 408 (771)
..++...... ...|.++|.++.+..... ..++..+.... .....+.++|||+.|+....
T Consensus 382 g~~~~s~~~~---------d~~V~v~d~~~~~~~~~~---~~~v~~l~~~g---------~~~~~v~~~pdg~~l~v~~~ 440 (543)
T 1nir_A 382 GPVWSTSHLG---------DGSISLIGTDPKNHPQYA---WKKVAELQGQG---------GGSLFIKTHPKSSHLYVDTT 440 (543)
T ss_dssp EEEEEEEBSS---------SSEEEEEECCTTTCTTTB---TSEEEEEECSC---------SCCCCEECCTTCCEEEECCT
T ss_pred ccEEEeccCC---------CceEEEEEeCCCCCchhc---CeEEEEEEcCC---------CCceEEEcCCCCCcEEEecC
Confidence 7765444321 245888888773321100 11222222211 12345779999998876542
Q ss_pred eC----CeeEEEEEECCCCcEE--Ee--------cCCCCCceeeEEeecCCEEEEEEe-CCCCCCeEEEEEeccc
Q 004149 409 WG----SSQVIISVNVSSGELL--RI--------TPAESNFSWSLLTLDGDNIIAVSS-SPVDVPQVKYGYFVDK 468 (771)
Q Consensus 409 ~~----~~~~l~~~d~~tg~~~--~l--------~~~~~~~~~~~~s~d~~~l~~~~s-~~~~p~~l~~~~~~~~ 468 (771)
.. ....|..+|+++++.. .| ...........|++||+.++++.- .......|.++|..+.
T Consensus 441 ~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~ 515 (543)
T 1nir_A 441 FNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTL 515 (543)
T ss_dssp TCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred CCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCc
Confidence 11 1336777898887754 32 122233456789999999998864 3345678888886554
No 310
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.26 E-value=4.5e-10 Score=117.93 Aligned_cols=113 Identities=12% Similarity=0.065 Sum_probs=64.7
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcc--cccccCCCcccceeecCCCCeEEEEecCCCC
Q 004149 100 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTV--HGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
....++|||||+++++... ....++.++ .+++....+...... .+ .....+.|||||++|++.......
T Consensus 44 ~~~~~~~s~dg~~~~v~~~---~~~~i~~~d~~t~~~~~~~~~~~~~~~~~-----~~~~~~~~spdg~~l~~~~~~~~~ 115 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNN---HYGDIYGIDLDTCKNTFHANLSSVPGEVG-----RSMYSFAISPDGKEVYATVNPTQR 115 (349)
T ss_dssp SSCEEEECTTSSEEEEEET---TTTEEEEEETTTTEEEEEEESCCSTTEEE-----ECSSCEEECTTSSEEEEEEEEEEE
T ss_pred CCceeEECCCCCEEEEEeC---CCCcEEEEeCCCCcEEEEEEccccccccc-----ccccceEECCCCCEEEEEcccccc
Confidence 3568899999998866543 234566666 455544444432210 00 011588999999999887643110
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeecc-CCCCCCccceEEEecCCC
Q 004149 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPLNE 252 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~-~~~~~~~~~~~~wspDg~ 252 (771)
... .| ......|++||+.+++..... .......+..++|+|||+
T Consensus 116 ~~~-----------------------~~---------~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 116 LND-----------------------HY---------VVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS 160 (349)
T ss_dssp CSS-----------------------CE---------EECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC
T ss_pred ccc-----------------------cc---------ccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc
Confidence 000 00 012368999999886543220 012222466788999997
No 311
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.25 E-value=3e-10 Score=122.34 Aligned_cols=256 Identities=11% Similarity=0.064 Sum_probs=150.2
Q ss_pred ceeEEEEEEeecCCCCccceeecCCccccccceEEEeCC-CCCeEEEEecCCCCCCeEEEEe--cCC-------cceEEE
Q 004149 70 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSP-SGSKLLVVRNPENESPIQFELW--SQS-------QLEKEF 139 (771)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~~~--~~~-------~~~~~~ 139 (771)
..+.+.++++...+.....+ ..+....+.+...+|+| +++.||..+..+ .+.+| ..+ ......
T Consensus 55 ~~g~i~v~~~~~~~~~~~~~--~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg-----~v~vw~~~~~~~~~~~~~~~~~~ 127 (402)
T 2aq5_A 55 GGGAFLVLPLGKTGRVDKNV--PLVCGHTAPVLDIAWCPHNDNVIASGSEDC-----TVMVWEIPDGGLVLPLREPVITL 127 (402)
T ss_dssp SSCCEEEEETTCCEECCTTC--CCBCCCSSCEEEEEECTTCTTEEEEEETTS-----EEEEEECCTTCCSSCBCSCSEEE
T ss_pred CCCEEEEEECccCCCCCCCC--ceEecCCCCEEEEEeCCCCCCEEEEEeCCC-----eEEEEEccCCCCccccCCceEEe
Confidence 34567777664332111111 11112235688999999 888888765443 44455 222 122222
Q ss_pred e-cCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCc
Q 004149 140 H-VPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQP 218 (771)
Q Consensus 140 ~-~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~ 218 (771)
. .... +..+.|+|||+.+++.+. .+.
T Consensus 128 ~~h~~~----------v~~~~~~p~~~~~l~s~~-------------------------------------------~dg 154 (402)
T 2aq5_A 128 EGHTKR----------VGIVAWHPTAQNVLLSAG-------------------------------------------CDN 154 (402)
T ss_dssp ECCSSC----------EEEEEECSSBTTEEEEEE-------------------------------------------TTS
T ss_pred cCCCCe----------EEEEEECcCCCCEEEEEc-------------------------------------------CCC
Confidence 2 1222 268999999954444322 225
Q ss_pred eEEEEEccCCceeeccC-CCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhh
Q 004149 219 SLFVININSGEVQAVKG-IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 297 (771)
Q Consensus 219 ~l~v~d~~~~~~~~l~~-~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 297 (771)
.|.+||+.+++...... ......+..++|+|||+. |+..+ .+..|.++|+
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----l~~~~---------------~d~~i~iwd~---------- 205 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGAL----ICTSC---------------RDKRVRVIEP---------- 205 (402)
T ss_dssp CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSC----EEEEE---------------TTSEEEEEET----------
T ss_pred EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCE----EEEEe---------------cCCcEEEEeC----------
Confidence 79999999887655410 123446789999999998 88776 3347899998
Q ss_pred hhhcCCCCCCcc-eec-CCCCcc-ccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEec
Q 004149 298 ELKESSSEDLPV-VNL-TESISS-AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 374 (771)
Q Consensus 298 ~~~~~~~~~~~~-~~l-t~~~~~-~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 374 (771)
.+++. ..+ ..+.+. +....|+|||+.|+...... ....|.+||+.+++........
T Consensus 206 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~--------~d~~i~iwd~~~~~~~~~~~~~------ 264 (402)
T 2aq5_A 206 -------RKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRM--------SERQVALWDTKHLEEPLSLQEL------ 264 (402)
T ss_dssp -------TTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTT--------CCEEEEEEETTBCSSCSEEEEC------
T ss_pred -------CCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCC--------CCceEEEEcCccccCCceEEec------
Confidence 44443 333 334333 67899999999777653211 1346899998775531110000
Q ss_pred ccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc--EEEecC--CCCCceeeEEeecCCEEE
Q 004149 375 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE--LLRITP--AESNFSWSLLTLDGDNII 448 (771)
Q Consensus 375 ~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~--~~~l~~--~~~~~~~~~~s~d~~~l~ 448 (771)
. ....+..++|+||++.|+++...++...+| ++.+++ +..+.. ....+....|++++..++
T Consensus 265 ---~--------~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~--d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 265 ---D--------TSSGVLLPFFDPDTNIVYLCGKGDSSIRYF--EITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEV 329 (402)
T ss_dssp ---C--------CCSSCEEEEEETTTTEEEEEETTCSCEEEE--EECSSTTCEEEEEEECCSSCCSEEEECCGGGSCG
T ss_pred ---c--------CCCceeEEEEcCCCCEEEEEEcCCCeEEEE--EecCCCcceEeecccccCCcccceEEecccccce
Confidence 0 001245678999999887776556666666 445565 554432 223455678888887654
No 312
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.25 E-value=6.7e-10 Score=117.80 Aligned_cols=252 Identities=11% Similarity=0.074 Sum_probs=143.5
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCC-CccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEE
Q 004149 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENE-NSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 127 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 127 (771)
.++||+.|++.. ..+.+.++++..... ....+... ...+...+|+|||+.|+.....+ .-.+|
T Consensus 16 ~s~~~~~l~~~~---------~d~~v~i~~~~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~~~~~dg--~i~vw 79 (372)
T 1k8k_C 16 WNKDRTQIAICP---------NNHEVHIYEKSGNKWVQVHELKEH-----NGQVTGVDWAPDSNRIVTCGTDR--NAYVW 79 (372)
T ss_dssp ECTTSSEEEEEC---------SSSEEEEEEEETTEEEEEEEEECC-----SSCEEEEEEETTTTEEEEEETTS--CEEEE
T ss_pred ECCCCCEEEEEe---------CCCEEEEEeCCCCcEEeeeeecCC-----CCcccEEEEeCCCCEEEEEcCCC--eEEEE
Confidence 356888887652 235677777643310 11222222 25688899999999998776432 22333
Q ss_pred EEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCC
Q 004149 128 ELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEED 207 (771)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 207 (771)
.+ ..++......... ..+ .+..+.|+|||+.|+..+.+
T Consensus 80 d~-~~~~~~~~~~~~~-~~~------~v~~~~~~~~~~~l~~~~~d---------------------------------- 117 (372)
T 1k8k_C 80 TL-KGRTWKPTLVILR-INR------AARCVRWAPNEKKFAVGSGS---------------------------------- 117 (372)
T ss_dssp EE-ETTEEEEEEECCC-CSS------CEEEEEECTTSSEEEEEETT----------------------------------
T ss_pred EC-CCCeeeeeEEeec-CCC------ceeEEEECCCCCEEEEEeCC----------------------------------
Confidence 33 2333233322211 111 23689999999999886432
Q ss_pred cCcccCCccCceEEEEEccCCc----eeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeE
Q 004149 208 WGETYAGKRQPSLFVININSGE----VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 283 (771)
Q Consensus 208 ~g~~~~~~~~~~l~v~d~~~~~----~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~ 283 (771)
..|.+||+.+++ ...+. ......+..+.|+||++. |+..+ ....|+
T Consensus 118 ----------~~v~i~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~----l~~~~---------------~dg~i~ 167 (372)
T 1k8k_C 118 ----------RVISICYFEQENDWWVCKHIK-KPIRSTVLSLDWHPNSVL----LAAGS---------------CDFKCR 167 (372)
T ss_dssp ----------SSEEEEEEETTTTEEEEEEEC-TTCCSCEEEEEECTTSSE----EEEEE---------------TTSCEE
T ss_pred ----------CEEEEEEecCCCcceeeeeee-cccCCCeeEEEEcCCCCE----EEEEc---------------CCCCEE
Confidence 567888888776 23331 233556889999999987 77655 223677
Q ss_pred EEecccccc-hhhhhhhhcCCCCCC-cceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCC
Q 004149 284 AVRVSLYKS-EASELELKESSSEDL-PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 361 (771)
Q Consensus 284 ~~d~~~~~~-~~~~~~~~~~~~~~~-~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~ 361 (771)
++|+..... .......+......+ ....+..+...+....|+|||+.|+..+.+ ..|.+||+.+++.
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------~~i~i~d~~~~~~ 236 (372)
T 1k8k_C 168 IFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD-----------STVCLADADKKMA 236 (372)
T ss_dssp EEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT-----------TEEEEEEGGGTTE
T ss_pred EEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCC-----------CEEEEEECCCCce
Confidence 777410000 000000000000122 334455566678899999999988877754 2588999876653
Q ss_pred CCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEEC
Q 004149 362 FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 420 (771)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~ 420 (771)
..... . ....+..++|+||++.| ++. .++...+|.++.
T Consensus 237 ~~~~~----------~---------~~~~v~~~~~~~~~~~l-~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 237 VATLA----------S---------ETLPLLAVTFITESSLV-AAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEE----------C---------SSCCEEEEEEEETTEEE-EEE-TTSSCEEEEEET
T ss_pred eEEEc----------c---------CCCCeEEEEEecCCCEE-EEE-eCCeEEEEEccC
Confidence 21110 0 00124567899999744 444 566777777664
No 313
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.25 E-value=1.4e-08 Score=107.51 Aligned_cols=258 Identities=10% Similarity=0.022 Sum_probs=141.9
Q ss_pred EEEeCCCCCeEEEEecC------CCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCC
Q 004149 103 AVVPSPSGSKLLVVRNP------ENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 175 (771)
Q Consensus 103 ~~~~SPdG~~la~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~ 175 (771)
.+++||||+++++.... +.....+..++ ...+....+.+..... .-....-..+.|||||++|++....
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~--~~~g~~p~~~~~spDG~~l~v~n~~-- 145 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPR--FDVGPYSWMNANTPNNADLLFFQFA-- 145 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccc--cccCCCccceEECCCCCEEEEEecC--
Confidence 89999999999665421 11123455555 3344444444320000 0000011478999999998876332
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeec-cCCCCCCccceEEEecCCCCC
Q 004149 176 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV-KGIPKSLSVGQVVWAPLNEGL 254 (771)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l-~~~~~~~~~~~~~wspDg~~~ 254 (771)
....|.++| +++++... ...+. .+.+.|+++.
T Consensus 146 ----------------------------------------~~~~v~viD-~t~~~~~~~i~~~~-----~~~~~~~~~~- 178 (373)
T 2mad_H 146 ----------------------------------------AGPAVGLVV-QGGSSDDQLLSSPT-----CYHIHPGAPS- 178 (373)
T ss_pred ----------------------------------------CCCeEEEEE-CCCCEEeEEcCCCc-----eEEEEeCCCc-
Confidence 125799999 98876533 22222 2456777776
Q ss_pred ccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceec------CCCCccccceeecCCC
Q 004149 255 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL------TESISSAFFPRFSPDG 328 (771)
Q Consensus 255 ~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l------t~~~~~~~~p~~SpDG 328 (771)
.++..+ ....+..+++ .+...... .........|.+++|+
T Consensus 179 ---~~~~~~--------------~dg~~~~vd~-----------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 224 (373)
T 2mad_H 179 ---TFYLLC--------------AQGGLAKTDH-----------------AGGAAGAGLVGAMLTAAQNLLTQPAQANKS 224 (373)
T ss_pred ---eEEEEc--------------CCCCEEEEEC-----------------CCcEEEEEeccccccCCcceeecceeEecC
Confidence 554432 1224555553 11111010 1111123457889999
Q ss_pred CEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEeccccc-CC-CCCcccccCCCCCCccccCCCEEEEE
Q 004149 329 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCA-EG-DCFPGLYSSSILSNPWLSDGCTMLLS 406 (771)
Q Consensus 329 ~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~-~~f~g~~~~~~~~~~~s~dg~~l~~~ 406 (771)
..++|.+.. .+++++|+.++..+.+. . .++.... .. ...| .....+.+++|+++||+.
T Consensus 225 ~~~~~~~~~-----------~~v~vid~~~~~~~v~~-~----~~~~~~~~~~~~~~p----~g~~~~~~s~d~~~lyV~ 284 (373)
T 2mad_H 225 GRIVWPVYS-----------GKILQADISAAGATNKA-P----IDALSGGRKADTWRP----GGWQQVAYLKSSDGIYLL 284 (373)
T ss_pred CEEEEEcCC-----------ceEEEEeccCCcceEee-e----eeecCCcccccceec----CceEeEEECCCCCEEEEE
Confidence 998888743 26999998765432211 0 0000000 00 0011 011235689999999887
Q ss_pred eeeC-------CeeEEEEEECCCCcE-EEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 407 SIWG-------SSQVIISVNVSSGEL-LRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 407 ~~~~-------~~~~l~~~d~~tg~~-~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
.... ....|+.||++++++ .+|.... ......+++||+.++++.+... ..|.++|..+.
T Consensus 285 ~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v~~~~~--~~V~ViD~~t~ 351 (373)
T 2mad_H 285 TSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH-DVDAISVAQDGGPDLYALSAGT--EVLHIYDAGAG 351 (373)
T ss_pred eccCCcccccCCCCeEEEEECCCCEEEEEEECCC-CcCeEEECCCCCeEEEEEcCCC--CeEEEEECCCC
Confidence 6432 235799999999987 4554333 3456789999996666654222 46888887654
No 314
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.25 E-value=6.2e-11 Score=122.35 Aligned_cols=234 Identities=9% Similarity=0.016 Sum_probs=140.7
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEE
Q 004149 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFEL 129 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~ 129 (771)
+|||..|+-. ...+.+.+|++... .....+.... ..+...+|+|||++|+..+... .+.+
T Consensus 22 sp~~~~l~s~---------~~dg~v~lWd~~~~-~~~~~~~~~~-----~~v~~~~~~~~~~~l~s~s~d~-----~i~v 81 (304)
T 2ynn_A 22 HPTEPWVLTT---------LYSGRVELWNYETQ-VEVRSIQVTE-----TPVRAGKFIARKNWIIVGSDDF-----RIRV 81 (304)
T ss_dssp CSSSSEEEEE---------ETTSEEEEEETTTT-EEEEEEECCS-----SCEEEEEEEGGGTEEEEEETTS-----EEEE
T ss_pred CCCCCEEEEE---------cCCCcEEEEECCCC-ceeEEeeccC-----CcEEEEEEeCCCCEEEEECCCC-----EEEE
Confidence 4577666543 23456777776332 1122222221 4577889999999998776544 5666
Q ss_pred ec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCC-CCCCCccCCCCCCcccccC
Q 004149 130 WS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTK-GGSSDKDCNSWKGQGDWEE 206 (771)
Q Consensus 130 ~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 206 (771)
|+ .++....+.... + .+.+++|+||++.|+..+.+...+ .|+..... .......+........|.|
T Consensus 82 wd~~~~~~~~~~~~h~---~------~v~~~~~~~~~~~l~sgs~D~~v~--lWd~~~~~~~~~~~~~h~~~v~~v~~~p 150 (304)
T 2ynn_A 82 FNYNTGEKVVDFEAHP---D------YIRSIAVHPTKPYVLSGSDDLTVK--LWNWENNWALEQTFEGHEHFVMCVAFNP 150 (304)
T ss_dssp EETTTCCEEEEEECCS---S------CEEEEEECSSSSEEEEEETTSCEE--EEEGGGTTEEEEEECCCCSCEEEEEECT
T ss_pred EECCCCcEEEEEeCCC---C------cEEEEEEcCCCCEEEEECCCCeEE--EEECCCCcchhhhhcccCCcEEEEEECC
Confidence 73 333332222111 1 126899999999999887766543 33321110 1111223334445667777
Q ss_pred Cc-CcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEec--CCCCCccEEEEEeecCcceeeeeeeeccCCceeE
Q 004149 207 DW-GETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP--LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 283 (771)
Q Consensus 207 d~-g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wsp--Dg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~ 283 (771)
+. ...+++..+..|.+||+..+.............+....|+| |++. |+..+ .+..|.
T Consensus 151 ~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----l~s~s---------------~D~~i~ 211 (304)
T 2ynn_A 151 KDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPY----MITAS---------------DDLTIK 211 (304)
T ss_dssp TCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCE----EEEEE---------------TTSEEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCE----EEEEc---------------CCCeEE
Confidence 43 34556667889999999766543221022334566778877 5554 55544 334788
Q ss_pred EEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCC
Q 004149 284 AVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 361 (771)
Q Consensus 284 ~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~ 361 (771)
++|+ .+++ ...+..+...+....|+|+++.|+..+.+. .|.+||+.+++.
T Consensus 212 iWd~-----------------~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg-----------~i~iWd~~~~~~ 262 (304)
T 2ynn_A 212 IWDY-----------------QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDG-----------TLKIWNSSTYKV 262 (304)
T ss_dssp EEET-----------------TTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTS-----------CEEEEETTTCCE
T ss_pred EEeC-----------------CCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCC-----------eEEEEECCCCce
Confidence 8898 4444 455666777788999999999888777653 488999887654
No 315
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.23 E-value=6.3e-10 Score=121.75 Aligned_cols=176 Identities=13% Similarity=0.071 Sum_probs=109.8
Q ss_pred CceEEEEEcc--CCceeec-cCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccch
Q 004149 217 QPSLFVININ--SGEVQAV-KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 293 (771)
Q Consensus 217 ~~~l~v~d~~--~~~~~~l-~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 293 (771)
...|.+||+. +++.... ........+..++|+|||+. |++.+ ....|+.+++
T Consensus 124 dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~----l~~~~---------------~~g~v~~~~~------ 178 (450)
T 2vdu_B 124 DKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT----VIIAD---------------KFGDVYSIDI------ 178 (450)
T ss_dssp GTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE----EEEEE---------------TTSEEEEEET------
T ss_pred CCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE----EEEEe---------------CCCcEEEEec------
Confidence 3678999988 6655444 11123346778999999997 77665 2347899997
Q ss_pred hhhhhhhcCCCCCCcce-----ecCCCCccccceeecCC---CCEEEEEecCCCCCCCCccccccceeeecCCCCCCCC-
Q 004149 294 ASELELKESSSEDLPVV-----NLTESISSAFFPRFSPD---GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS- 364 (771)
Q Consensus 294 ~~~~~~~~~~~~~~~~~-----~lt~~~~~~~~p~~SpD---G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~- 364 (771)
.++... .+..+...+....|||| |+.|+..+.+ ..|++||+.++.....
T Consensus 179 -----------~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----------~~i~vwd~~~~~~~~~~ 236 (450)
T 2vdu_B 179 -----------NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-----------EHIKISHYPQCFIVDKW 236 (450)
T ss_dssp -----------TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-----------SCEEEEEESCTTCEEEE
T ss_pred -----------CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-----------CcEEEEECCCCceeeee
Confidence 333322 44455667889999999 8888777654 3588999877654211
Q ss_pred ccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC-------------
Q 004149 365 LEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA------------- 431 (771)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~------------- 431 (771)
..+ +...+..++|+ ||+.|+ +...++ .|..+|+.+++.......
T Consensus 237 ~~~-------------------h~~~v~~~~~s-d~~~l~-s~~~d~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (450)
T 2vdu_B 237 LFG-------------------HKHFVSSICCG-KDYLLL-SAGGDD--KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHL 293 (450)
T ss_dssp CCC-------------------CSSCEEEEEEC-STTEEE-EEESSS--EEEEEETTTCCEEEEEECHHHHGGGCCTTSB
T ss_pred ecC-------------------CCCceEEEEEC-CCCEEE-EEeCCC--eEEEEECCCCcEeeeecchhhhhhhhhhccc
Confidence 000 01124567899 998665 444444 455668888875443321
Q ss_pred -------------CCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEe
Q 004149 432 -------------ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 465 (771)
Q Consensus 432 -------------~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~ 465 (771)
...+....++++++.|++.... -..|++.++
T Consensus 294 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~---d~~i~iw~~ 337 (450)
T 2vdu_B 294 APPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEA---TKCIIILEM 337 (450)
T ss_dssp C----------CBCCCEEEEEECSSSSEEEEEETT---CSEEEEEEE
T ss_pred ccccccccccccceEEEEEEEEeCCCCEEEEEECC---CCeEEEEEe
Confidence 1123445777888877766632 245666666
No 316
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.23 E-value=1.9e-10 Score=124.44 Aligned_cols=256 Identities=11% Similarity=0.008 Sum_probs=153.5
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEecC--CcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004149 101 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQ--SQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
...++|||||++|+.....+ .+.+|+. +...+... .+ .......|+|||++|+..+.
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~-----~v~i~d~~~~~~~~~~~----~~------~~~~~~~~~~~~~~l~~~~~------ 117 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDG-----HDFLFNTIIRDGSKMLK----RA------DYTAVDTAKLQMRRFILGTT------ 117 (420)
T ss_dssp CTTCEEEEEETTEEEEEETT-----EEEEEECCSEETTTTSC----SC------CEEEEEEECSSSCEEEEEET------
T ss_pred ccceeeeecCCeEEEEEcCC-----cEEEEEecccceeeEEe----cC------CceEEEEEecCCCEEEEEEC------
Confidence 34579999999998876543 4445522 11111111 11 11235579999999988643
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEE
Q 004149 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 258 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l 258 (771)
...|.+||+.+++..... ......+..++|+|||+. |
T Consensus 118 --------------------------------------dg~i~iwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~----l 154 (420)
T 3vl1_A 118 --------------------------------------EGDIKVLDSNFNLQREID-QAHVSEITKLKFFPSGEA----L 154 (420)
T ss_dssp --------------------------------------TSCEEEECTTSCEEEEET-TSSSSCEEEEEECTTSSE----E
T ss_pred --------------------------------------CCCEEEEeCCCcceeeec-ccccCccEEEEECCCCCE----E
Confidence 257899999988877662 244557889999999997 7
Q ss_pred EEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCC
Q 004149 259 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 338 (771)
Q Consensus 259 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~ 338 (771)
+..+ .+..|.++|+. .+.....+..+...+....|+|||+.|+..+.+.
T Consensus 155 ~s~s---------------~d~~i~iwd~~----------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~ 203 (420)
T 3vl1_A 155 ISSS---------------QDMQLKIWSVK----------------DGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDG 203 (420)
T ss_dssp EEEE---------------TTSEEEEEETT----------------TCCCCEEEECCSSCEEEEEEETTTTEEEEEETTS
T ss_pred EEEe---------------CCCeEEEEeCC----------------CCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCC
Confidence 7665 33478889982 2334566666777899999999999998777553
Q ss_pred CCCCCCccccccceeeecCCCCCCCCccc----eeeEEecccccCCC-CCcccccCCCCCCccccCCCEEEEEeeeCCee
Q 004149 339 SVDSGAHSATDSLHRIDWPTNGNFSSLEK----IVDVIPVVQCAEGD-CFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 413 (771)
Q Consensus 339 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~----~~~~~~~~~~~~~~-~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 413 (771)
.|.+||+.+++....... ...+..+...+... .........+..++|+|||+.|+ +...++.
T Consensus 204 -----------~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~- 270 (420)
T 3vl1_A 204 -----------TIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVI-AGHVSGV- 270 (420)
T ss_dssp -----------CEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEE-EEETTSC-
T ss_pred -----------cEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEE-EEcCCCe-
Confidence 488889877654221110 00000000000000 00001123456789999998664 4444555
Q ss_pred EEEEEECCCCcEEEec-CC-CCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 414 VIISVNVSSGELLRIT-PA-ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 414 ~l~~~d~~tg~~~~l~-~~-~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
|..+|+.+++..... .. ...+....|+++++.++++.+.. ..|.+.++.++
T Consensus 271 -i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d---g~i~vwd~~~~ 323 (420)
T 3vl1_A 271 -ITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN---GMLAQWDLRSP 323 (420)
T ss_dssp -EEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETT---SEEEEEETTCT
T ss_pred -EEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCC---CeEEEEEcCCC
Confidence 445577777644333 22 23456678899988444444322 45777776543
No 317
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.23 E-value=7.5e-10 Score=117.39 Aligned_cols=249 Identities=8% Similarity=0.057 Sum_probs=143.2
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
..+...+|||||+.||+....+ .+.+| ..++...+..+.. ..+ .+.++.|+|||+.|+..+.
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d~-----~v~i~~~~~~~~~~~~~~~~-h~~------~v~~~~~~~~~~~l~~~~~---- 72 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNNH-----EVHIYEKSGNKWVQVHELKE-HNG------QVTGVDWAPDSNRIVTCGT---- 72 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSSS-----EEEEEEEETTEEEEEEEEEC-CSS------CEEEEEEETTTTEEEEEET----
T ss_pred CCeEEEEECCCCCEEEEEeCCC-----EEEEEeCCCCcEEeeeeecC-CCC------cccEEEEeCCCCEEEEEcC----
Confidence 4578899999999998764432 34444 3333112222211 111 2268999999999988643
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeecc-CCCCCCccceEEEecCCCCCc
Q 004149 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPLNEGLH 255 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~-~~~~~~~~~~~~wspDg~~~~ 255 (771)
...|.+||+.+++..... .......+..+.|+|||+.
T Consensus 73 ----------------------------------------dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-- 110 (372)
T 1k8k_C 73 ----------------------------------------DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKK-- 110 (372)
T ss_dssp ----------------------------------------TSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSE--
T ss_pred ----------------------------------------CCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCE--
Confidence 257899999888743321 1334456889999999987
Q ss_pred cEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc----ceec-CCCCccccceeecCCCCE
Q 004149 256 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP----VVNL-TESISSAFFPRFSPDGKF 330 (771)
Q Consensus 256 ~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~----~~~l-t~~~~~~~~p~~SpDG~~ 330 (771)
|+..+ .+..|.++|+ ..+. ...+ ..+...+....|+|||+.
T Consensus 111 --l~~~~---------------~d~~v~i~d~-----------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 111 --FAVGS---------------GSRVISICYF-----------------EQENDWWVCKHIKKPIRSTVLSLDWHPNSVL 156 (372)
T ss_dssp --EEEEE---------------TTSSEEEEEE-----------------ETTTTEEEEEEECTTCCSCEEEEEECTTSSE
T ss_pred --EEEEe---------------CCCEEEEEEe-----------------cCCCcceeeeeeecccCCCeeEEEEcCCCCE
Confidence 77665 2235666665 2232 2233 334567889999999998
Q ss_pred EEEEecCCCCCCCCccccccceeeecCCCCCCCCccc--------eeeEEecccccCCCCCcccccCCCCCCccccCCCE
Q 004149 331 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK--------IVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCT 402 (771)
Q Consensus 331 l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~ 402 (771)
|+..+.+. .|.+||+........... .......+. + ....+..++|+||++.
T Consensus 157 l~~~~~dg-----------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~v~~~~~~~~~~~ 216 (372)
T 1k8k_C 157 LAAGSCDF-----------KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS--------S-SCGWVHGVCFSANGSR 216 (372)
T ss_dssp EEEEETTS-----------CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC--------C-CSSCEEEEEECSSSSE
T ss_pred EEEEcCCC-----------CEEEEEcccccccccccccccccccchhhheEecC--------C-CCCeEEEEEECCCCCE
Confidence 88776543 478888653221100000 000111010 0 1113457789999986
Q ss_pred EEEEeeeCCeeEEEEEECCCCcEEE-ecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004149 403 MLLSSIWGSSQVIISVNVSSGELLR-ITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 403 l~~~~~~~~~~~l~~~d~~tg~~~~-l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~ 467 (771)
|+ +...++. |..+|+.+++... +......+....|+++++.++. . .+ ..+.+.++..
T Consensus 217 l~-~~~~d~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~--~d--~~i~i~~~~~ 274 (372)
T 1k8k_C 217 VA-WVSHDST--VCLADADKKMAVATLASETLPLLAVTFITESSLVAA-G--HD--CFPVLFTYDS 274 (372)
T ss_dssp EE-EEETTTE--EEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEE-E--TT--SSCEEEEEET
T ss_pred EE-EEeCCCE--EEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEE-E--eC--CeEEEEEccC
Confidence 65 4444554 5555776776544 4333335566788988875443 3 22 2345555544
No 318
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.22 E-value=4.7e-10 Score=117.92 Aligned_cols=276 Identities=11% Similarity=0.027 Sum_probs=156.9
Q ss_pred ccceEEEe-----CC-CCCeEEEEecCCCCCCeEEEEecCCc---c-eEEEecCCcccccccCCCcccceeecCCCCeEE
Q 004149 99 TGASAVVP-----SP-SGSKLLVVRNPENESPIQFELWSQSQ---L-EKEFHVPQTVHGSVYADGWFEGISWNSDETLIA 168 (771)
Q Consensus 99 ~~~~~~~~-----SP-dG~~la~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la 168 (771)
..+...+| +| ||+.||..+..+ .-.+|.+..... . .....+. +..+ .+..++|+||++.|+
T Consensus 22 ~~V~~~~~~~s~~~~~d~~~l~sgs~D~--~v~iWd~~~~~~~~~~~~~~~~l~-~h~~------~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 22 DWVTSIVAGFSQKENEDSPVLISGSRDK--TVMIWKLYEEEQNGYFGIPHKALT-GHNH------FVSDLALSQENCFAI 92 (343)
T ss_dssp SCEEEEEECCCSSTTCCCCEEEEEETTS--CEEEEEECSSCCSSBSEEEEEEEC-CCSS------CEEEEEECSSTTEEE
T ss_pred hhhhheeeEEEeecCCCCCEEEEEcCCC--EEEEEECCcCCcccccccccchhc-cCCC------ceEEEEECCCCCEEE
Confidence 34677778 77 999888765543 333333331111 1 1111111 1111 236899999999998
Q ss_pred EEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccC-CCCCCccceEEE
Q 004149 169 YVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG-IPKSLSVGQVVW 247 (771)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~-~~~~~~~~~~~w 247 (771)
..+.+...+ .|+............+........|+++....+++.....|.+||+.+.....+.. ......+..+.|
T Consensus 93 s~s~D~~v~--lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~ 170 (343)
T 2xzm_R 93 SSSWDKTLR--LWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRY 170 (343)
T ss_dssp EEETTSEEE--EEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEE
T ss_pred EEcCCCcEE--EEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeee
Confidence 877665433 34432222222223344445567789987667777778999999998655444410 123345778899
Q ss_pred ecCCCCC------ccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccc
Q 004149 248 APLNEGL------HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFF 321 (771)
Q Consensus 248 spDg~~~------~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~ 321 (771)
+|+++.. .++|+..+ .+..|.++|. .......+..+...+..
T Consensus 171 ~~~~~~~~~~~~~~~~l~s~~---------------~d~~i~iwd~-----------------~~~~~~~~~~h~~~v~~ 218 (343)
T 2xzm_R 171 SPIMKSANKVQPFAPYFASVG---------------WDGRLKVWNT-----------------NFQIRYTFKAHESNVNH 218 (343)
T ss_dssp CCCCCSCSCCCSSCCEEEEEE---------------TTSEEEEEET-----------------TTEEEEEEECCSSCEEE
T ss_pred ccccccccccCCCCCEEEEEc---------------CCCEEEEEcC-----------------CCceeEEEcCccccceE
Confidence 9998420 00144333 2346777775 44444455566677889
Q ss_pred eeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCC
Q 004149 322 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC 401 (771)
Q Consensus 322 p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~ 401 (771)
.+|||||++|+..+.+. .|.+||+............ ...+..++|+||++
T Consensus 219 ~~~s~~g~~l~sgs~dg-----------~v~iwd~~~~~~~~~~~~~-------------------~~~v~~v~~sp~~~ 268 (343)
T 2xzm_R 219 LSISPNGKYIATGGKDK-----------KLLIWDILNLTYPQREFDA-------------------GSTINQIAFNPKLQ 268 (343)
T ss_dssp EEECTTSSEEEEEETTC-----------EEEEEESSCCSSCSEEEEC-------------------SSCEEEEEECSSSC
T ss_pred EEECCCCCEEEEEcCCC-----------eEEEEECCCCcccceeecC-------------------CCcEEEEEECCCCC
Confidence 99999999998777553 5888888433221100000 01245678999998
Q ss_pred EEEEEeeeCCeeEEEEEECCCCcEE---EecC-----------CCCCceeeEEeecCCEEEEEE
Q 004149 402 TMLLSSIWGSSQVIISVNVSSGELL---RITP-----------AESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 402 ~l~~~~~~~~~~~l~~~d~~tg~~~---~l~~-----------~~~~~~~~~~s~d~~~l~~~~ 451 (771)
.|. .+ .++...|| ++.+++.. .+.. ....+....|+|+|+.|+...
T Consensus 269 ~la-~~-~d~~v~iw--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~ 328 (343)
T 2xzm_R 269 WVA-VG-TDQGVKIF--NLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGF 328 (343)
T ss_dssp EEE-EE-ESSCEEEE--ESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE
T ss_pred EEE-EE-CCCCEEEE--EeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEec
Confidence 553 33 34444454 66555432 2221 112234567888988776554
No 319
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.22 E-value=5.3e-10 Score=129.67 Aligned_cols=279 Identities=12% Similarity=0.102 Sum_probs=156.9
Q ss_pred cccceeEEEEEEeecCCCCc----cceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEe
Q 004149 67 ANKRKKFMLSTVISKENENS----VTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFH 140 (771)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~----~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~ 140 (771)
+....+.+.+|++....... ..++. ....+...+|||||+.|+..+..+ .+.+|+ .+...+.+.
T Consensus 400 s~s~D~~i~~W~~~~~~~~~~~~~~~~~~-----h~~~v~~v~~s~~g~~l~sgs~Dg-----~v~vwd~~~~~~~~~~~ 469 (694)
T 3dm0_A 400 SASRDKSIILWKLTKDDKAYGVAQRRLTG-----HSHFVEDVVLSSDGQFALSGSWDG-----ELRLWDLAAGVSTRRFV 469 (694)
T ss_dssp EEETTSEEEEEECCCSTTCSCEEEEEEEC-----CSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEE
T ss_pred EEeCCCcEEEEEccCCCcccccccceecC-----CCCcEEEEEECCCCCEEEEEeCCC-----cEEEEECCCCcceeEEe
Confidence 33445677777775443211 12222 225688899999999998776544 566773 333222222
Q ss_pred c-CCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCC---CCCCccCCCCCCcccccCCcC--cccCC
Q 004149 141 V-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKG---GSSDKDCNSWKGQGDWEEDWG--ETYAG 214 (771)
Q Consensus 141 ~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~g--~~~~~ 214 (771)
. ... +.+++|||||+.|+..+.+...+ .|+...... ......+..+.....|+++.. ..+++
T Consensus 470 ~h~~~----------v~~~~~s~~~~~l~s~s~D~~i~--iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~ 537 (694)
T 3dm0_A 470 GHTKD----------VLSVAFSLDNRQIVSASRDRTIK--LWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSA 537 (694)
T ss_dssp CCSSC----------EEEEEECTTSSCEEEEETTSCEE--EECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEE
T ss_pred CCCCC----------EEEEEEeCCCCEEEEEeCCCEEE--EEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEE
Confidence 1 222 26899999999999888766543 333211000 011112333444556777642 24556
Q ss_pred ccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchh
Q 004149 215 KRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 294 (771)
Q Consensus 215 ~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 294 (771)
..+..|.+||+.+++..... ......+..++|||||+. |+..+ .+..|.++|+
T Consensus 538 s~d~~v~vwd~~~~~~~~~~-~~h~~~v~~v~~spdg~~----l~sg~---------------~Dg~i~iwd~------- 590 (694)
T 3dm0_A 538 SWDKTVKVWNLSNCKLRSTL-AGHTGYVSTVAVSPDGSL----CASGG---------------KDGVVLLWDL------- 590 (694)
T ss_dssp ETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------TTSBCEEEET-------
T ss_pred eCCCeEEEEECCCCcEEEEE-cCCCCCEEEEEEeCCCCE----EEEEe---------------CCCeEEEEEC-------
Confidence 66789999999988765541 334556889999999997 77655 3347888887
Q ss_pred hhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccc-eeeEEe
Q 004149 295 SELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK-IVDVIP 373 (771)
Q Consensus 295 ~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~ 373 (771)
.+++..........+....|||||..|+.... ..|.+||+.++........ ......
T Consensus 591 ----------~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~------------~~i~iwd~~~~~~~~~~~~~~~~~~~ 648 (694)
T 3dm0_A 591 ----------AEGKKLYSLEANSVIHALCFSPNRYWLCAATE------------HGIKIWDLESKSIVEDLKVDLKAEAE 648 (694)
T ss_dssp ----------TTTEEEECCBCSSCEEEEEECSSSSEEEEEET------------TEEEEEETTTTEEEEEECCCCC----
T ss_pred ----------CCCceEEEecCCCcEEEEEEcCCCcEEEEEcC------------CCEEEEECCCCCChhhhccccccccc
Confidence 55544333334455788999999987765432 2388999887653211000 000000
Q ss_pred cccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEE
Q 004149 374 VVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 418 (771)
Q Consensus 374 ~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~ 418 (771)
............ .......++|||||+.| ++.+.++...||.+
T Consensus 649 ~~~~~~~~~~~~-~~~~~~~l~~spdg~~l-~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 649 KADNSGPAATKR-KVIYCTSLNWSADGSTL-FSGYTDGVIRVWGI 691 (694)
T ss_dssp -------------CCCCEEEEEECTTSSEE-EEEETTSEEEEEEC
T ss_pred cccccccccCCc-eeEEeeeEEEcCCCCEE-EEEcCCCeEEEEec
Confidence 000000000000 00012356899999966 56666777777754
No 320
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.21 E-value=7.9e-11 Score=125.51 Aligned_cols=210 Identities=13% Similarity=0.088 Sum_probs=114.8
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCC-CCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEE
Q 004149 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKEN-ENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 128 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 128 (771)
++||+.|+... ..+.+.+|++.... .....+. .....+...+|||||++|+..+..+ .+.
T Consensus 20 s~~g~~l~~~~---------~d~~i~iw~~~~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~s~d~-----~v~ 80 (377)
T 3dwl_C 20 NSQRTEFVTTT---------ATNQVELYEQDGNGWKHARTFS-----DHDKIVTCVDWAPKSNRIVTCSQDR-----NAY 80 (377)
T ss_dssp CSSSSEEECCC---------SSSCBCEEEEETTEEEECCCBC-----CCSSCEEEEEECTTTCCEEEEETTS-----SEE
T ss_pred CCCCCEEEEec---------CCCEEEEEEccCCceEEEEEEe-----cCCceEEEEEEeCCCCEEEEEeCCC-----eEE
Confidence 56888776542 23455666664321 1112222 2235688999999999998876543 344
Q ss_pred Eec--CCc-ceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCccccc
Q 004149 129 LWS--QSQ-LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 205 (771)
Q Consensus 129 ~~~--~~~-~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (771)
+|+ .+. ........ ...+ .+.++.|+|||+.|+..+.+
T Consensus 81 vwd~~~~~~~~~~~~~~-~~~~------~v~~~~~~~~~~~l~~~~~d-------------------------------- 121 (377)
T 3dwl_C 81 VYEKRPDGTWKQTLVLL-RLNR------AATFVRWSPNEDKFAVGSGA-------------------------------- 121 (377)
T ss_dssp EC------CCCCEEECC-CCSS------CEEEEECCTTSSCCEEEESS--------------------------------
T ss_pred EEEcCCCCceeeeeEec-ccCC------ceEEEEECCCCCEEEEEecC--------------------------------
Confidence 552 222 11222221 1111 23689999999999886543
Q ss_pred CCcCcccCCccCceEEEEEccCCc----eeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCce
Q 004149 206 EDWGETYAGKRQPSLFVININSGE----VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCA 281 (771)
Q Consensus 206 ~d~g~~~~~~~~~~l~v~d~~~~~----~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~ 281 (771)
..|.+||+.+++ ...+. .+....+..++|+|||+. |+..+ .+..
T Consensus 122 ------------~~i~iwd~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~----l~~~~---------------~d~~ 169 (377)
T 3dwl_C 122 ------------RVISVCYFEQENDWWVSKHLK-RPLRSTILSLDWHPNNVL----LAAGC---------------ADRK 169 (377)
T ss_dssp ------------SCEEECCC-----CCCCEEEC-SSCCSCEEEEEECTTSSE----EEEEE---------------SSSC
T ss_pred ------------CeEEEEEECCcccceeeeEee-cccCCCeEEEEEcCCCCE----EEEEe---------------CCCE
Confidence 468888888776 44552 124567889999999987 77765 2235
Q ss_pred eEEEecccccc-hhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCC
Q 004149 282 LYAVRVSLYKS-EASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 359 (771)
Q Consensus 282 l~~~d~~~~~~-~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~ 359 (771)
|.++|+..... .......+......++ ...+ .+...+....|||||+.|+..+.+. .|.+||+.++
T Consensus 170 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~-----------~i~iwd~~~~ 237 (377)
T 3dwl_C 170 AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDS-----------SVTIAYPSAP 237 (377)
T ss_dssp EEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTT-----------EEC-CEECST
T ss_pred EEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCC-----------cEEEEECCCC
Confidence 66666510000 0000000000000122 2223 5556688999999999998877653 4888888876
Q ss_pred CC
Q 004149 360 GN 361 (771)
Q Consensus 360 ~~ 361 (771)
+.
T Consensus 238 ~~ 239 (377)
T 3dwl_C 238 EQ 239 (377)
T ss_dssp TS
T ss_pred CC
Confidence 54
No 321
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.21 E-value=1.8e-09 Score=114.62 Aligned_cols=244 Identities=12% Similarity=0.105 Sum_probs=146.8
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCC--CCeEEEEecCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpD--g~~la~~~~~~~~ 176 (771)
..+...+|||||++||.....+ .-.+|.+. .+....+..+. ...+. +.++.|+|+ ++.|+..+.+
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg--~i~iw~~~-~~~~~~~~~~~-~h~~~------v~~~~~~~~~~~~~l~s~~~d--- 78 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDK--TIKIFEVE-GETHKLIDTLT-GHEGP------VWRVDWAHPKFGTILASCSYD--- 78 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTS--CEEEEEEE-TTEEEEEEEEC-CCSSC------EEEEEECCGGGCSEEEEEETT---
T ss_pred ccEEEEEEcCCCCEEEEEECCC--cEEEEecC-CCcceeeeEec-CCCCc------EEEEEeCCCCCCCEEEEeccC---
Confidence 4588899999999998775432 22333332 12222222221 11112 268999988 8888776432
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce---eeccCCCCCCccceEEEecC--C
Q 004149 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV---QAVKGIPKSLSVGQVVWAPL--N 251 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~---~~l~~~~~~~~~~~~~wspD--g 251 (771)
..|.+||+.+++. ..+ ......+..+.|+|+ +
T Consensus 79 -----------------------------------------g~v~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~ 115 (379)
T 3jrp_A 79 -----------------------------------------GKVLIWKEENGRWSQIAVH--AVHSASVNSVQWAPHEYG 115 (379)
T ss_dssp -----------------------------------------SCEEEEEEETTEEEEEEEE--CCCSSCEEEEEECCGGGC
T ss_pred -----------------------------------------CEEEEEEcCCCceeEeeee--cCCCcceEEEEeCCCCCC
Confidence 5789999998863 333 334557889999999 7
Q ss_pred CCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC---cceecCCCCccccceeecC--
Q 004149 252 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL---PVVNLTESISSAFFPRFSP-- 326 (771)
Q Consensus 252 ~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~lt~~~~~~~~p~~Sp-- 326 (771)
+. |+..+ ....|.++|+ ..+ ....+..+...+..+.|+|
T Consensus 116 ~~----l~~~~---------------~d~~i~v~d~-----------------~~~~~~~~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 116 PL----LLVAS---------------SDGKVSVVEF-----------------KENGTTSPIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp SE----EEEEE---------------TTSEEEEEEC-----------------CTTSCCCEEEEECCTTCEEEEEECCCC
T ss_pred CE----EEEec---------------CCCcEEEEec-----------------CCCCceeeEEecCCCCceEEEEEcCcc
Confidence 76 66655 3347888887 333 2334455666788999999
Q ss_pred -----------CCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCc
Q 004149 327 -----------DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNP 395 (771)
Q Consensus 327 -----------DG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ 395 (771)
||+.|+..+.+. .|++||+.++.... .....+.. +...+..++
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~~dg-----------~i~i~d~~~~~~~~------~~~~~~~~---------h~~~v~~~~ 213 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGGADN-----------LVKIWKYNSDAQTY------VLESTLEG---------HSDWVRDVA 213 (379)
T ss_dssp ----------CTTCEEEEEETTS-----------CEEEEEEETTTTEE------EEEEEECC---------CSSCEEEEE
T ss_pred ccccccccCCCCCCEEEEEeCCC-----------eEEEEEecCCCcce------eeEEEEec---------ccCcEeEEE
Confidence 799888777653 48888887654311 01111100 111345778
Q ss_pred cccCC--CEEEEEeeeCCeeEEEEEECCCCc---EEEecC---CCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEec
Q 004149 396 WLSDG--CTMLLSSIWGSSQVIISVNVSSGE---LLRITP---AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 396 ~s~dg--~~l~~~~~~~~~~~l~~~d~~tg~---~~~l~~---~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~ 466 (771)
|+||+ ..++++...++...+|.+ .+++ ...+.. ....+....|+++++.|+....+ ..+++.++.
T Consensus 214 ~sp~~~~~~~l~s~~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d----g~i~iw~~~ 286 (379)
T 3jrp_A 214 WSPTVLLRSYLASVSQDRTCIIWTQ--DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD----NKVTLWKEN 286 (379)
T ss_dssp ECCCCSSSEEEEEEETTSCEEEEEE--SSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESS----SSEEEEEEE
T ss_pred ECCCCCCCCeEEEEeCCCEEEEEeC--CCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCC----CcEEEEeCC
Confidence 99993 345566666777667654 4442 233322 22345556899999977766542 235555544
No 322
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.21 E-value=2.3e-10 Score=122.72 Aligned_cols=292 Identities=11% Similarity=0.015 Sum_probs=159.0
Q ss_pred ccceeEEEEEEeecCCC-----CccceeecCCccccccceEEEeCCC----C---CeEEEEecCCCCCCeEEEEecCCcc
Q 004149 68 NKRKKFMLSTVISKENE-----NSVTFQWAPFPVEMTGASAVVPSPS----G---SKLLVVRNPENESPIQFELWSQSQL 135 (771)
Q Consensus 68 ~~~~~~~~~~~~~~~~~-----~~~~lt~~~~~~~~~~~~~~~~SPd----G---~~la~~~~~~~~~~~~~~~~~~~~~ 135 (771)
....+.+.+|++..... ....+.. ....+...+|+|+ | +.|+..... +.-.+|.+..+...
T Consensus 32 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d--g~i~iw~~~~~~~~ 104 (397)
T 1sq9_A 32 CSGDGYLKVWDNKLLDNENPKDKSYSHFV-----HKSGLHHVDVLQAIERDAFELCLVATTSFS--GDLLFYRITREDET 104 (397)
T ss_dssp EETTSEEEEEESBCCTTCCGGGGEEEEEC-----CTTCEEEEEEEEEEETTTEEEEEEEEEETT--SCEEEEEEEECTTT
T ss_pred EcCCCEEEEEECCCcccccCCCcceEEec-----CCCcEEEEEEecccccCCccccEEEEEcCC--CCEEEEEccCCccc
Confidence 33456778877754431 1122221 2245788999999 9 888876553 33334444332221
Q ss_pred ----eEEEecCCcccccccCCCcccceeec----CCCCe-EEEEecCCCCCCCCccCCC------CCCCC-----CC---
Q 004149 136 ----EKEFHVPQTVHGSVYADGWFEGISWN----SDETL-IAYVAEEPSPSKPTFSLGS------TKGGS-----SD--- 192 (771)
Q Consensus 136 ----~~~~~~~~~~~g~~~~~~~~~~~~wS----pDg~~-la~~~~~~~~~~~~~~~~~------~~~~~-----~~--- 192 (771)
.+....... + ..++.+.++.|+ |||+. |+..+.+.... .|+... ..... ..
T Consensus 105 ~~~~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~--iwd~~~~~~~~~~~~~~~~~~~~~~~~ 178 (397)
T 1sq9_A 105 KKVIFEKLDLLDS-D---MKKHSFWALKWGASNDRLLSHRLVATDVKGTTY--IWKFHPFADESNSLTLNWSPTLELQGT 178 (397)
T ss_dssp CCEEEEEECCSCT-T---GGGSCEEEEEEECCC----CEEEEEEETTSCEE--EEEEESSSSHHHHTTTCCCCEEEEEEE
T ss_pred ccccceeeccccc-c---cCCCcEEEEEEeeccCCCCceEEEEEeCCCcEE--EEeCCccccccccceeeccCcceeeee
Confidence 222221100 0 001123789999 99999 87776654322 233221 11111 11
Q ss_pred ----ccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCC---C---CCccceEEEecCCCCCccEEEEEe
Q 004149 193 ----KDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIP---K---SLSVGQVVWAPLNEGLHQYLVFVG 262 (771)
Q Consensus 193 ----~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~---~---~~~~~~~~wspDg~~~~~~l~~~~ 262 (771)
..+........|.++. ..+++.....|.+||+.+++..... .. . ...+..+.|+|||+. |+..+
T Consensus 179 ~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~h~~~~~~i~~i~~~~~~~~----l~~~~ 252 (397)
T 1sq9_A 179 VESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNF-ESQHSMINNSNSIRSVKFSPQGSL----LAIAH 252 (397)
T ss_dssp ECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEE-ECCC---CCCCCEEEEEECSSTTE----EEEEE
T ss_pred eccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEE-eccccccccCCccceEEECCCCCE----EEEEe
Confidence 1234445567788886 6667777889999999988765541 11 2 557889999999997 77655
Q ss_pred ecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCC-------------CCccccceeecCCC
Q 004149 263 WSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTE-------------SISSAFFPRFSPDG 328 (771)
Q Consensus 263 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~-------------~~~~~~~p~~SpDG 328 (771)
... ....|.++|+ .+++ ...+.. +...+....|+|||
T Consensus 253 ~d~------------~~g~i~i~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 303 (397)
T 1sq9_A 253 DSN------------SFGCITLYET-----------------EFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG 303 (397)
T ss_dssp EET------------TEEEEEEEET-----------------TTCCEEEEECBC--------CCBSBSSCEEEEEECSSS
T ss_pred cCC------------CCceEEEEEC-----------------CCCcccceeccCcccccccccccccCCcEEEEEECCCC
Confidence 210 0136888887 4443 344444 55678899999999
Q ss_pred CEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccce-eeEEec-ccccCCCC-CcccccCCCCCCccccCCC----
Q 004149 329 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKI-VDVIPV-VQCAEGDC-FPGLYSSSILSNPWLSDGC---- 401 (771)
Q Consensus 329 ~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~-~~~~~~-~~~~~~~~-f~g~~~~~~~~~~~s~dg~---- 401 (771)
+.|+..+.+ ..|.+||+.+++........ ... .. ........ ...++...+..++|+|||+
T Consensus 304 ~~l~~~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~ 371 (397)
T 1sq9_A 304 ETLCSAGWD-----------GKLRFWDVKTKERITTLNMHCDDI-EIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGM 371 (397)
T ss_dssp SEEEEEETT-----------SEEEEEETTTTEEEEEEECCGGGC-SSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBST
T ss_pred CEEEEEeCC-----------CeEEEEEcCCCceeEEEecccCcc-cchhhhhccccccccccCCceeEEEeccccccccc
Confidence 998877654 35889998776532111000 000 00 00000000 0000123456789999984
Q ss_pred -----EEEEEeeeCCeeEEEEEE
Q 004149 402 -----TMLLSSIWGSSQVIISVN 419 (771)
Q Consensus 402 -----~l~~~~~~~~~~~l~~~d 419 (771)
.++++...++...+|.++
T Consensus 372 ~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 372 GADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp TCTTSCEEEEEETTTEEEEEEEE
T ss_pred cccccceEEEecCCCcEEEEEcC
Confidence 356677777777777554
No 323
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.20 E-value=7.7e-09 Score=108.55 Aligned_cols=164 Identities=9% Similarity=-0.007 Sum_probs=107.5
Q ss_pred ccceeecC--CCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceee
Q 004149 155 FEGISWNS--DETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQA 232 (771)
Q Consensus 155 ~~~~~wSp--Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~ 232 (771)
+..++|+| +|+.|+..+.+ ..|.+||+.+++...
T Consensus 128 v~~~~~~~~~~~~~l~s~s~d--------------------------------------------g~i~~wd~~~~~~~~ 163 (343)
T 3lrv_A 128 IIYMYGHNEVNTEYFIWADNR--------------------------------------------GTIGFQSYEDDSQYI 163 (343)
T ss_dssp EEEEECCC---CCEEEEEETT--------------------------------------------CCEEEEESSSSCEEE
T ss_pred EEEEEcCCCCCCCEEEEEeCC--------------------------------------------CcEEEEECCCCcEEE
Confidence 36899999 99988876432 578999999988765
Q ss_pred ccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc--e
Q 004149 233 VKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--V 310 (771)
Q Consensus 233 l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--~ 310 (771)
+........+..++|+|||+. |+..+ .+..|.++|+ .+++. .
T Consensus 164 ~~~~~~~~~i~~~~~~pdg~~----lasg~---------------~dg~i~iwd~-----------------~~~~~~~~ 207 (343)
T 3lrv_A 164 VHSAKSDVEYSSGVLHKDSLL----LALYS---------------PDGILDVYNL-----------------SSPDQASS 207 (343)
T ss_dssp EECCCSSCCCCEEEECTTSCE----EEEEC---------------TTSCEEEEES-----------------SCTTSCCE
T ss_pred EEecCCCCceEEEEECCCCCE----EEEEc---------------CCCEEEEEEC-----------------CCCCCCcc
Confidence 521223335788999999986 66544 3347888898 55543 3
Q ss_pred ecCC-CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccC
Q 004149 311 NLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSS 389 (771)
Q Consensus 311 ~lt~-~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~ 389 (771)
.+.. +...+....|||||+.|+..+.+ .|.+||+.+++......... ...+
T Consensus 208 ~~~~~h~~~v~~l~fs~~g~~l~s~~~~------------~v~iwd~~~~~~~~~~~~~~----------~~~~------ 259 (343)
T 3lrv_A 208 RFPVDEEAKIKEVKFADNGYWMVVECDQ------------TVVCFDLRKDVGTLAYPTYT----------IPEF------ 259 (343)
T ss_dssp ECCCCTTSCEEEEEECTTSSEEEEEESS------------BEEEEETTSSTTCBSSCCCB----------C---------
T ss_pred EEeccCCCCEEEEEEeCCCCEEEEEeCC------------eEEEEEcCCCCcceeecccc----------cccc------
Confidence 5655 56779999999999998877722 48999998765422111100 0000
Q ss_pred CCC--CCccccCCCEEEEEeeeCCeeEEEEEECCCCcEE
Q 004149 390 SIL--SNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELL 426 (771)
Q Consensus 390 ~~~--~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~ 426 (771)
... .++|+|+|+.|+..+..++...+|.++.......
T Consensus 260 ~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~ 298 (343)
T 3lrv_A 260 KTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWT 298 (343)
T ss_dssp --CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEE
T ss_pred cccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceE
Confidence 112 3789999997765444367778887765444333
No 324
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.20 E-value=1.4e-09 Score=111.74 Aligned_cols=234 Identities=12% Similarity=0.171 Sum_probs=138.0
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec-C-C--cceEEEecCCcccccccCCCcccceeecCC--CCeEEEEec
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS-Q-S--QLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAE 172 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~-~-~--~~~~~~~~~~~~~g~~~~~~~~~~~~wSpD--g~~la~~~~ 172 (771)
..+...+|||||++||..+..+ ...+|+ . + +....+. +..+. +.+++|+|+ |+.|+..+.
T Consensus 10 ~~V~~~~~s~~g~~las~s~D~-----~v~iw~~~~~~~~~~~~l~---gH~~~------V~~v~~s~~~~g~~l~s~s~ 75 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSSDK-----TIKIFEVEGETHKLIDTLT---GHEGP------VWRVDWAHPKFGTILASCSY 75 (297)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEEBCSSCBCCCEEEC---CCSSC------EEEEEECCGGGCSEEEEEET
T ss_pred CceEEEEECCCCCEEEEEeCCC-----EEEEEecCCCCcEEEEEEc---cccCC------eEEEEecCCCcCCEEEEEcC
Confidence 4578899999999998776543 344552 1 1 2222222 11112 268999874 888877643
Q ss_pred CCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeecc-CCCCCCccceEEEecC-
Q 004149 173 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPL- 250 (771)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~-~~~~~~~~~~~~wspD- 250 (771)
+ ..|.+||+.+++...+. -......+..++|+|+
T Consensus 76 D--------------------------------------------~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 111 (297)
T 2pm7_B 76 D--------------------------------------------GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHE 111 (297)
T ss_dssp T--------------------------------------------TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGG
T ss_pred C--------------------------------------------CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCC
Confidence 3 57899999887532221 0233456889999998
Q ss_pred -CCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC---cceecCCCCccccceeecC
Q 004149 251 -NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL---PVVNLTESISSAFFPRFSP 326 (771)
Q Consensus 251 -g~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~lt~~~~~~~~p~~Sp 326 (771)
|+. |+..+ .+..|.++|+ ..+ ....+..+...+.+..|+|
T Consensus 112 ~g~~----l~s~s---------------~d~~v~~wd~-----------------~~~~~~~~~~~~~h~~~v~~~~~~p 155 (297)
T 2pm7_B 112 YGPM----LLVAS---------------SDGKVSVVEF-----------------KENGTTSPIIIDAHAIGVNSASWAP 155 (297)
T ss_dssp GCSE----EEEEE---------------TTSEEEEEEB-----------------CSSSCBCCEEEECCSSCEEEEEECC
T ss_pred CCcE----EEEEE---------------CCCcEEEEEe-----------------cCCCceeeeeeecccCccceEeecC
Confidence 665 66554 2336777887 322 1234445566788899999
Q ss_pred C-------------CCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCC
Q 004149 327 D-------------GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILS 393 (771)
Q Consensus 327 D-------------G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~ 393 (771)
+ ++.|+..+.+. .|.+||+.++.... .....+. + +...+..
T Consensus 156 ~~~~~~~~~~~~~~~~~l~sgs~D~-----------~v~lwd~~~~~~~~------~~~~~l~--------~-H~~~V~~ 209 (297)
T 2pm7_B 156 ATIEEDGEHNGTKESRKFVTGGADN-----------LVKIWKYNSDAQTY------VLESTLE--------G-HSDWVRD 209 (297)
T ss_dssp CC------------CCEEEEEETTS-----------CEEEEEEETTTTEE------EEEEEEC--------C-CSSCEEE
T ss_pred CcccccccCCCCCCcceEEEEcCCC-----------cEEEEEEcCCCceE------EEEEEec--------C-CCCceEE
Confidence 7 46676666543 47788876644210 0000010 0 1113457
Q ss_pred CccccCC--CEEEEEeeeCCeeEEEEEECCCCcE-EEec---CCCCCceeeEEeecCCEEEEEEe
Q 004149 394 NPWLSDG--CTMLLSSIWGSSQVIISVNVSSGEL-LRIT---PAESNFSWSLLTLDGDNIIAVSS 452 (771)
Q Consensus 394 ~~~s~dg--~~l~~~~~~~~~~~l~~~d~~tg~~-~~l~---~~~~~~~~~~~s~d~~~l~~~~s 452 (771)
++|+|++ ..++++.+.++...||.++...+.. ..+. .....+....|+++++.|+....
T Consensus 210 v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~ 274 (297)
T 2pm7_B 210 VAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (297)
T ss_dssp EEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEET
T ss_pred EEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcC
Confidence 8899996 4566777788888888665432222 2222 11223455688999987765554
No 325
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.20 E-value=8.8e-09 Score=108.65 Aligned_cols=290 Identities=11% Similarity=0.023 Sum_probs=155.4
Q ss_pred CCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCC----CCeEEEEecCCCCCCeE
Q 004149 51 GNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPS----GSKLLVVRNPENESPIQ 126 (771)
Q Consensus 51 ~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPd----G~~la~~~~~~~~~~~~ 126 (771)
+|+....++.... ..+.+|++.... ....+.....+.....+...+|||+ |+.|+.....+ .
T Consensus 31 ~~~~~~~~~~~~~--------~~v~vw~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg-----~ 96 (366)
T 3k26_A 31 KEGDPLVFATVGS--------NRVTLYECHSQG-EIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG-----I 96 (366)
T ss_dssp CTTSCEEEEEEET--------TEEEEEEECGGG-CEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC-----E
T ss_pred CCCCceEEEECCC--------CEEEEEEcCCCc-EEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC-----E
Confidence 3466555554432 256666664332 2222221111112245788999999 66777665443 5
Q ss_pred EEEec--CCcceEEEecCCcccccccCCCcccceeecC-CCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCccc
Q 004149 127 FELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNS-DETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGD 203 (771)
Q Consensus 127 ~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (771)
+.+|+ .++....+.... + .+..+.|+| |++.|+..+.
T Consensus 97 i~v~d~~~~~~~~~~~~~~---~------~i~~~~~~~~~~~~l~s~~~------------------------------- 136 (366)
T 3k26_A 97 IRIINPITMQCIKHYVGHG---N------AINELKFHPRDPNLLLSVSK------------------------------- 136 (366)
T ss_dssp EEEECTTTCCEEEEEESCC---S------CEEEEEECSSCTTEEEEEET-------------------------------
T ss_pred EEEEEchhceEeeeecCCC---C------cEEEEEECCCCCCEEEEEeC-------------------------------
Confidence 66663 334333333111 1 226899999 8888877643
Q ss_pred ccCCcCcccCCccCceEEEEEccCCceeeccC--CCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCce
Q 004149 204 WEEDWGETYAGKRQPSLFVININSGEVQAVKG--IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCA 281 (771)
Q Consensus 204 ~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~--~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~ 281 (771)
...|.+||+.+++...... ......+..+.|+|||+. |+..+ .+..
T Consensus 137 -------------dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----l~~~~---------------~dg~ 184 (366)
T 3k26_A 137 -------------DHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEK----IMSCG---------------MDHS 184 (366)
T ss_dssp -------------TSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSE----EEEEE---------------TTSC
T ss_pred -------------CCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCE----EEEec---------------CCCC
Confidence 2579999999887655510 134457889999999997 77665 2336
Q ss_pred eEEEecccccchhhhhhhhcC-CCCC------------CcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCcccc
Q 004149 282 LYAVRVSLYKSEASELELKES-SSED------------LPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSAT 348 (771)
Q Consensus 282 l~~~d~~~~~~~~~~~~~~~~-~~~~------------~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~ 348 (771)
|.++|+...... ..+..... .... .....+..+...+....|+ |+.|+..+.+
T Consensus 185 i~i~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d----------- 250 (366)
T 3k26_A 185 LKLWRINSKRMM-NAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCE----------- 250 (366)
T ss_dssp EEEEESCSHHHH-HHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSS-----------
T ss_pred EEEEECCCCccc-cccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecC-----------
Confidence 888887321100 00000000 0000 0011111245567788888 6777666544
Q ss_pred ccceeeecCCCCCCC--Ccccee--eEEecccccCCCCCcccccCCCCCCccccC--CCEEEEEeeeCCeeEEEEEECCC
Q 004149 349 DSLHRIDWPTNGNFS--SLEKIV--DVIPVVQCAEGDCFPGLYSSSILSNPWLSD--GCTMLLSSIWGSSQVIISVNVSS 422 (771)
Q Consensus 349 ~~l~~~d~~~~~~~~--~~~~~~--~~~~~~~~~~~~~f~g~~~~~~~~~~~s~d--g~~l~~~~~~~~~~~l~~~d~~t 422 (771)
..|.+||+.++.... +..... ........ +...+..++|+|| ++.|+ +...++...+ +|+.+
T Consensus 251 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~v~~~~~s~~~~~~~l~-~~~~dg~i~v--wd~~~ 318 (366)
T 3k26_A 251 NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDY---------SQCDIWYMRFSMDFWQKMLA-LGNQVGKLYV--WDLEV 318 (366)
T ss_dssp SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEEC---------SSCCSSCCCCEECTTSSEEE-EECTTSCEEE--EECCS
T ss_pred CEEEEEeCCCccccccccccCCcchheeccccc---------cCCcEEEEEEcCCCCCcEEE-EEecCCcEEE--EECCC
Confidence 358888887654311 100000 01111110 1123567889999 88554 4444555444 56666
Q ss_pred Cc-----EEEecCC--CCCceeeEEeecCCEEEEEEe
Q 004149 423 GE-----LLRITPA--ESNFSWSLLTLDGDNIIAVSS 452 (771)
Q Consensus 423 g~-----~~~l~~~--~~~~~~~~~s~d~~~l~~~~s 452 (771)
++ ...+... ...+....|+++++.|+....
T Consensus 319 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 355 (366)
T 3k26_A 319 EDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCD 355 (366)
T ss_dssp SSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCCccccceEEcccccCCceEEEEeCCCCCeEEEEeC
Confidence 64 2244433 345566788999988776553
No 326
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.19 E-value=2.7e-09 Score=121.50 Aligned_cols=277 Identities=12% Similarity=0.122 Sum_probs=161.4
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCC---CCccceeecCCcccccc-ceEEEeCC--CCCeEEEEecCCCCC
Q 004149 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKEN---ENSVTFQWAPFPVEMTG-ASAVVPSP--SGSKLLVVRNPENES 123 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~lt~~~~~~~~~~-~~~~~~SP--dG~~la~~~~~~~~~ 123 (771)
+|||+.|++..+ ..+.++++.... .....+... ... +...+||| ||++||.....+
T Consensus 27 spdg~~l~~~~~----------~~v~v~~~~~~~~~~~~~~~~~~h-----~~~~v~~~~~sp~~~~~~l~s~~~dg--- 88 (615)
T 1pgu_A 27 DPTTNAIAYPCG----------KSAFVRCLDDGDSKVPPVVQFTGH-----GSSVVTTVKFSPIKGSQYLCSGDESG--- 88 (615)
T ss_dssp ETTTTEEEEEET----------TEEEEEECCSSCCSSCSEEEECTT-----TTSCEEEEEECSSTTCCEEEEEETTS---
T ss_pred CCCCCEEEEecC----------CeEEEEECCCCCCccccceEEecC-----CCceEEEEEECcCCCCCEEEEecCCC---
Confidence 579999998751 256666665331 122223222 256 78999999 999998876532
Q ss_pred CeEEEEec--CC------cceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccC
Q 004149 124 PIQFELWS--QS------QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDC 195 (771)
Q Consensus 124 ~~~~~~~~--~~------~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (771)
.+.+|+ .+ ....+.... ... +.+..+.|||||+.|+..+....
T Consensus 89 --~v~vw~~~~~~~~~~~~~~~~~~~~-~~~------~~v~~~~~s~~~~~l~~~~~~~~-------------------- 139 (615)
T 1pgu_A 89 --KVIVWGWTFDKESNSVEVNVKSEFQ-VLA------GPISDISWDFEGRRLCVVGEGRD-------------------- 139 (615)
T ss_dssp --EEEEEEEEEEGGGTEEEEEEEEEEE-CCS------SCEEEEEECTTSSEEEEEECCSS--------------------
T ss_pred --EEEEEeCCCCcccccccccccchhh-ccc------ccEEEEEEeCCCCEEEEeccCCC--------------------
Confidence 344442 22 112222211 111 12369999999999998764421
Q ss_pred CCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeee
Q 004149 196 NSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYC 275 (771)
Q Consensus 196 ~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~ 275 (771)
....|++|| .+.....+ ......+..+.|+||++. +++++.
T Consensus 140 --------------------~~~~v~~~d-~~~~~~~~--~~~~~~v~~~~~~~~~~~----~l~~~~------------ 180 (615)
T 1pgu_A 140 --------------------NFGVFISWD-SGNSLGEV--SGHSQRINACHLKQSRPM----RSMTVG------------ 180 (615)
T ss_dssp --------------------CSEEEEETT-TCCEEEEC--CSCSSCEEEEEECSSSSC----EEEEEE------------
T ss_pred --------------------CccEEEEEE-CCCcceee--ecCCccEEEEEECCCCCc----EEEEEe------------
Confidence 235778887 33344445 344557888999999996 555542
Q ss_pred ccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCc---cccceeecCC-CCEEEEEecCCCCCCCCcccccc
Q 004149 276 YNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESIS---SAFFPRFSPD-GKFLVFLSAKSSVDSGAHSATDS 350 (771)
Q Consensus 276 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~---~~~~p~~SpD-G~~l~f~~~~~~~~~g~~~~~~~ 350 (771)
.+..|.++|+ .+++ ...+..+.. .+....|+|| |+.|+..+.+. .
T Consensus 181 --~d~~v~vwd~-----------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----------~ 230 (615)
T 1pgu_A 181 --DDGSVVFYQG-----------------PPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR-----------K 230 (615)
T ss_dssp --TTTEEEEEET-----------------TTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTC-----------C
T ss_pred --CCCcEEEEeC-----------------CCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCC-----------e
Confidence 3347888887 4443 445555666 7889999999 99888777553 5
Q ss_pred ceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC
Q 004149 351 LHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP 430 (771)
Q Consensus 351 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~ 430 (771)
|.+||+.+++...... ... ......+..++|+ |++.|+ +...++. |..+|+.+++......
T Consensus 231 i~vwd~~~~~~~~~~~---------~~~------~~~~~~v~~~~~~-~~~~l~-~~~~d~~--i~~wd~~~~~~~~~~~ 291 (615)
T 1pgu_A 231 ISCFDGKSGEFLKYIE---------DDQ------EPVQGGIFALSWL-DSQKFA-TVGADAT--IRVWDVTTSKCVQKWT 291 (615)
T ss_dssp EEEEETTTCCEEEECC---------BTT------BCCCSCEEEEEES-SSSEEE-EEETTSE--EEEEETTTTEEEEEEE
T ss_pred EEEEECCCCCEeEEec---------ccc------cccCCceEEEEEc-CCCEEE-EEcCCCc--EEEEECCCCcEEEEEc
Confidence 8999987765422110 000 0011134567899 888664 4444444 5555887776554433
Q ss_pred CC-----CCceeeEEeecCCEEEEEEeCCCCCCeEEEEEec
Q 004149 431 AE-----SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 431 ~~-----~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~ 466 (771)
.. .......+ ++++.++....+ ..+++.++.
T Consensus 292 ~~~~~~~~~~~~~~~-~~~~~l~~~~~~----g~i~~~d~~ 327 (615)
T 1pgu_A 292 LDKQQLGNQQVGVVA-TGNGRIISLSLD----GTLNFYELG 327 (615)
T ss_dssp CCTTCGGGCEEEEEE-EETTEEEEEETT----SCEEEEETT
T ss_pred CCCCcccCceeEEEe-CCCCeEEEEECC----CCEEEEECC
Confidence 22 11222233 477777655542 245555544
No 327
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.19 E-value=3e-09 Score=115.76 Aligned_cols=206 Identities=10% Similarity=0.076 Sum_probs=128.9
Q ss_pred ccceEEEeCCC-CCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecC-CCCeEEEEecCC
Q 004149 99 TGASAVVPSPS-GSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNS-DETLIAYVAEEP 174 (771)
Q Consensus 99 ~~~~~~~~SPd-G~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSp-Dg~~la~~~~~~ 174 (771)
..+...+|+|+ ++.||..+..+ .+.+|+ .++...+... .+..+.| .+++|+| |++.|+..+.
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~-~gH~~~V------~~l~f~p~~~~~l~s~s~-- 185 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKG-IGAGGSI------TGLKFNPLNTNQFYASSM-- 185 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTS-----CEEEECSSCCSCCEEECC-CSSSCCC------CEEEECSSCTTEEEEECS--
T ss_pred CCEEEEEEeCCCCCEEEEEeCCC-----EEEEEECCCCCceeEEEc-cCCCCCE------EEEEEeCCCCCEEEEEeC--
Confidence 34788999995 56676655433 456662 3333333332 1222223 7999998 6777776533
Q ss_pred CCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccC-CCCCCccceEEEecCCCC
Q 004149 175 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG-IPKSLSVGQVVWAPLNEG 253 (771)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~-~~~~~~~~~~~wspDg~~ 253 (771)
+..|.+||+.++..+.+.. ......+..+.|+|||+.
T Consensus 186 ------------------------------------------D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (435)
T 4e54_B 186 ------------------------------------------EGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRM 223 (435)
T ss_dssp ------------------------------------------SSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTE
T ss_pred ------------------------------------------CCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCE
Confidence 2578899999887666521 112334668899999986
Q ss_pred CccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEE
Q 004149 254 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVF 333 (771)
Q Consensus 254 ~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f 333 (771)
|+..+ ....|+++|+ .+.....+..+...+.+..|+|+|+.++.
T Consensus 224 ----l~~g~---------------~dg~i~~wd~-----------------~~~~~~~~~~h~~~v~~v~~~p~~~~~~~ 267 (435)
T 4e54_B 224 ----VVTGD---------------NVGNVILLNM-----------------DGKELWNLRMHKKKVTHVALNPCCDWFLA 267 (435)
T ss_dssp ----EEEEC---------------SSSBEEEEES-----------------SSCBCCCSBCCSSCEEEEEECTTCSSEEE
T ss_pred ----EEEEe---------------CCCcEeeecc-----------------CcceeEEEecccceEEeeeecCCCceEEE
Confidence 66554 3347888998 66666777777778999999999987665
Q ss_pred EecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCee
Q 004149 334 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 413 (771)
Q Consensus 334 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 413 (771)
....+ ..|.+||+.+........... -+...+..++|+|||+.| ++...++..
T Consensus 268 s~s~d----------~~v~iwd~~~~~~~~~~~~~~----------------~h~~~v~~~~~spdg~~l-~s~~~D~~i 320 (435)
T 4e54_B 268 TASVD----------QTVKIWDLRQVRGKASFLYSL----------------PHRHPVNAACFSPDGARL-LTTDQKSEI 320 (435)
T ss_dssp EEETT----------SBCCEEETTTCCSSSCCSBCC----------------BCSSCEEECCBCTTSSEE-EEEESSSCE
T ss_pred EecCc----------ceeeEEecccccccceEEEee----------------eccccccceeECCCCCee-EEEcCCCEE
Confidence 55432 357888887655322110000 011134567899999966 455556665
Q ss_pred EEEEEECCCCcE
Q 004149 414 VIISVNVSSGEL 425 (771)
Q Consensus 414 ~l~~~d~~tg~~ 425 (771)
.|| |+.+++.
T Consensus 321 ~iw--d~~~~~~ 330 (435)
T 4e54_B 321 RVY--SASQWDC 330 (435)
T ss_dssp EEE--ESSSSSS
T ss_pred EEE--ECCCCcc
Confidence 555 6666653
No 328
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.18 E-value=1.1e-10 Score=126.59 Aligned_cols=184 Identities=15% Similarity=0.229 Sum_probs=121.7
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
..+...+|||||++||..+..+ ...+|+... .+.... |........+.+++|||||+.||..+.++..+
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg-----~V~iwd~~~--~l~~l~---~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk- 154 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNG-----NVSVFKDNK--MLTNLD---SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ- 154 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTS-----CEEEEETTE--EEEECC---CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE-
T ss_pred CcEEEEEECCCCCEEEEEeCCC-----cEEEEeCCc--eeeecc---CCCccccccEEEEEEcCCCCEEEEEcCCCEEE-
Confidence 5689999999999999887655 466674322 222222 11100111236899999999999998877543
Q ss_pred CCccCCCCCCC-------CC----CccCCCCCCcccccCCcCcccCCccCceEEEEEccCCcee----eccCCCCCCccc
Q 004149 179 PTFSLGSTKGG-------SS----DKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ----AVKGIPKSLSVG 243 (771)
Q Consensus 179 ~~~~~~~~~~~-------~~----~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~----~l~~~~~~~~~~ 243 (771)
.|+....... .. ...+..|.....|+||. .+++..+..+++||+.+++.. .+. ......+.
T Consensus 155 -IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~-~~h~~~V~ 230 (588)
T 2j04_A 155 -FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ-NASRRKIT 230 (588)
T ss_dssp -EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE-CCCSSCCC
T ss_pred -EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeec-ccccCcEE
Confidence 4443332210 11 13355688899999995 778888899999999988743 231 12345788
Q ss_pred eEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eecCCCCccccce
Q 004149 244 QVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTESISSAFFP 322 (771)
Q Consensus 244 ~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~~~~~~~p 322 (771)
+++|+ |+. |+..+ ...|.++|+ .++.. .....+...+.+.
T Consensus 231 svaFs--g~~----LASa~----------------~~tIkLWd~-----------------~~~~~~~~~~gh~~~V~~v 271 (588)
T 2j04_A 231 DLKIV--DYK----VVLTC----------------PGYVHKIDL-----------------KNYSISSLKTGSLENFHII 271 (588)
T ss_dssp CEEEE--TTE----EEEEC----------------SSEEEEEET-----------------TTTEEEEEECSCCSCCCEE
T ss_pred EEEEE--CCE----EEEEe----------------CCeEEEEEC-----------------CCCeEEEEEcCCCceEEEE
Confidence 99999 554 55543 137899998 66666 3333666678889
Q ss_pred ee--cCCCCEEEEEec
Q 004149 323 RF--SPDGKFLVFLSA 336 (771)
Q Consensus 323 ~~--SpDG~~l~f~~~ 336 (771)
.| ||||+.|+-...
T Consensus 272 a~~~s~d~~~La~a~e 287 (588)
T 2j04_A 272 PLNHEKESTILLMSNK 287 (588)
T ss_dssp EETTCSSCEEEEECSS
T ss_pred EeeeCCCCCEEEEEcC
Confidence 99 999987765553
No 329
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.17 E-value=1.3e-09 Score=113.91 Aligned_cols=286 Identities=11% Similarity=0.024 Sum_probs=155.3
Q ss_pred ccceEEEeCCCC-CeEEEEecCCCCCCeEEEEecCCc-ceE-EEecCCcccccccCCCcccceeecCCCCeEEEEecCCC
Q 004149 99 TGASAVVPSPSG-SKLLVVRNPENESPIQFELWSQSQ-LEK-EFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 175 (771)
Q Consensus 99 ~~~~~~~~SPdG-~~la~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~ 175 (771)
+.+...+|||++ +.||-.+.+ +.-.+|.+..... ... ...+. +..+ .+..+.|+|||+.|+..+.+..
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D--~~i~vWd~~~~~~~~~~~~~~l~-~h~~------~V~~~~~s~dg~~l~s~~~d~~ 109 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRD--KTIIMWKLTRDETNYGIPQRALR-GHSH------FVSDVVISSDGQFALSGSWDGT 109 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETT--SCEEEEEECCSSSCSEEEEEEEC-CCSS------CEEEEEECTTSSEEEEEETTSE
T ss_pred CCEEEEEEeCCCCCEEEEEcCC--CeEEEEECCCCCcccceeeEEEe-CCCC------CEEEEEECCCCCEEEEEccccc
Confidence 568899999984 666655443 3333444332211 111 11111 1111 2368999999999988776543
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCc
Q 004149 176 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLH 255 (771)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~ 255 (771)
.. .|......................+.++....+++..+..+.+||+.+..............+....|++++..
T Consensus 110 i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-- 185 (340)
T 4aow_A 110 LR--LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-- 185 (340)
T ss_dssp EE--EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSS--
T ss_pred ce--EEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCC--
Confidence 21 11111000000000111111122344443444455566789999988766554421233446678899999876
Q ss_pred cEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEE
Q 004149 256 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFL 334 (771)
Q Consensus 256 ~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~ 334 (771)
.++++- .....|.++|+ .+++ ...+..+...+.+..|||||+.|+..
T Consensus 186 --~~~~s~-------------~~d~~i~i~d~-----------------~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 233 (340)
T 4aow_A 186 --PIIVSC-------------GWDKLVKVWNL-----------------ANCKLKTNHIGHTGYLNTVTVSPDGSLCASG 233 (340)
T ss_dssp --CEEEEE-------------ETTSCEEEEET-----------------TTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred --cEEEEE-------------cCCCEEEEEEC-----------------CCCceeeEecCCCCcEEEEEECCCCCEEEEE
Confidence 444331 12336888887 4444 45556667778899999999998876
Q ss_pred ecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeE
Q 004149 335 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 414 (771)
Q Consensus 335 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 414 (771)
+.+ ..|.+||+.+.......... ..+..+.|+|++..+ .. ..++.
T Consensus 234 s~D-----------g~i~iwd~~~~~~~~~~~~~--------------------~~v~~~~~~~~~~~~-~~-~~d~~-- 278 (340)
T 4aow_A 234 GKD-----------GQAMLWDLNEGKHLYTLDGG--------------------DIINALCFSPNRYWL-CA-ATGPS-- 278 (340)
T ss_dssp ETT-----------CEEEEEETTTTEEEEEEECS--------------------SCEEEEEECSSSSEE-EE-EETTE--
T ss_pred eCC-----------CeEEEEEeccCceeeeecCC--------------------ceEEeeecCCCCcee-ec-cCCCE--
Confidence 654 35888898765432110000 123456789988633 33 33444
Q ss_pred EEEEECCCCcEEEecC----------CCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 415 IISVNVSSGELLRITP----------AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 415 l~~~d~~tg~~~~l~~----------~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
|..+|+.++....-.. ....+....|++|++.|+....+ ..|++-++.++
T Consensus 279 i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D----g~v~iW~~~tG 338 (340)
T 4aow_A 279 IKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD----NLVRVWQVTIG 338 (340)
T ss_dssp EEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETT----SCEEEEEEEC-
T ss_pred EEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC----CEEEEEeCCCc
Confidence 4555777665432221 11234456788999877655432 23666666554
No 330
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.16 E-value=3.5e-09 Score=113.49 Aligned_cols=246 Identities=13% Similarity=0.064 Sum_probs=139.3
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCcc-ceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEE
Q 004149 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSV-TFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 127 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 127 (771)
.++||+.|+... ..+.+.+|++... +.. .+.. ....+...+|+|||++|+..+... ..
T Consensus 131 ~s~dg~~l~s~~---------~d~~i~iwd~~~~--~~~~~~~~-----h~~~v~~~~~~p~~~~l~s~s~d~-----~v 189 (393)
T 1erj_A 131 FSPDGKFLATGA---------EDRLIRIWDIENR--KIVMILQG-----HEQDIYSLDYFPSGDKLVSGSGDR-----TV 189 (393)
T ss_dssp ECTTSSEEEEEE---------TTSCEEEEETTTT--EEEEEECC-----CSSCEEEEEECTTSSEEEEEETTS-----EE
T ss_pred ECCCCCEEEEEc---------CCCeEEEEECCCC--cEEEEEcc-----CCCCEEEEEEcCCCCEEEEecCCC-----cE
Confidence 356888777543 2356777776322 222 2211 124578899999999998766543 56
Q ss_pred EEec--CCcceEEEecCCcccccccCCCcccceeecC-CCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccc
Q 004149 128 ELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNS-DETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 204 (771)
Q Consensus 128 ~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (771)
.+|+ .++..........+ ..+.|+| ||+.|+..+.+
T Consensus 190 ~iwd~~~~~~~~~~~~~~~v----------~~~~~~~~~~~~l~~~s~d------------------------------- 228 (393)
T 1erj_A 190 RIWDLRTGQCSLTLSIEDGV----------TTVAVSPGDGKYIAAGSLD------------------------------- 228 (393)
T ss_dssp EEEETTTTEEEEEEECSSCE----------EEEEECSTTCCEEEEEETT-------------------------------
T ss_pred EEEECCCCeeEEEEEcCCCc----------EEEEEECCCCCEEEEEcCC-------------------------------
Confidence 6663 33333333322222 5889999 89888876432
Q ss_pred cCCcCcccCCccCceEEEEEccCCceeec-c-----CCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccC
Q 004149 205 EEDWGETYAGKRQPSLFVININSGEVQAV-K-----GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNR 278 (771)
Q Consensus 205 ~~d~g~~~~~~~~~~l~v~d~~~~~~~~l-~-----~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~ 278 (771)
..|.+||+.+++.... . .......+..++|+|||+. |+..+ .
T Consensus 229 -------------~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~----l~s~s---------------~ 276 (393)
T 1erj_A 229 -------------RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS----VVSGS---------------L 276 (393)
T ss_dssp -------------SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSE----EEEEE---------------T
T ss_pred -------------CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCE----EEEEe---------------C
Confidence 5688899888765432 1 0123346788999999997 76554 2
Q ss_pred CceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecC
Q 004149 279 PCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 357 (771)
Q Consensus 279 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~ 357 (771)
+..|.++|+.... ... .......+. ...+..+...+.+..|+|+|++|+..+.+ ..|++||+.
T Consensus 277 d~~v~~wd~~~~~----~~~-~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D-----------~~v~iwd~~ 340 (393)
T 1erj_A 277 DRSVKLWNLQNAN----NKS-DSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD-----------RGVLFWDKK 340 (393)
T ss_dssp TSEEEEEEC--------------------CEEEEEECCSSCEEEEEECGGGCEEEEEETT-----------SEEEEEETT
T ss_pred CCEEEEEECCCCC----Ccc-cccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCC-----------CeEEEEECC
Confidence 2367777762100 000 000001111 22344455668889999999998876655 358899988
Q ss_pred CCCCCCCcccee-eEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEE
Q 004149 358 TNGNFSSLEKIV-DVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 419 (771)
Q Consensus 358 ~~~~~~~~~~~~-~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d 419 (771)
+++......+.. .+..+. -.....|+|++. ++++...++...||.+.
T Consensus 341 ~~~~~~~l~~h~~~v~~v~--------------~~~~~~~~p~~~-~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 341 SGNPLLMLQGHRNSVISVA--------------VANGSSLGPEYN-VFATGSGDCKARIWKYK 388 (393)
T ss_dssp TCCEEEEEECCSSCEEEEE--------------ECSSCTTCTTCE-EEEEEETTSEEEEEEEE
T ss_pred CCeEEEEECCCCCCEEEEE--------------ecCCcCcCCCCC-EEEEECCCCcEEECccc
Confidence 765422111110 000000 001224566776 55677778888888765
No 331
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.16 E-value=3.6e-09 Score=113.75 Aligned_cols=239 Identities=12% Similarity=0.106 Sum_probs=151.1
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004149 101 ASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
.....||+ ..++.....+ .+.+| ..++...+..... . +.+.+++|+|||+.|+..+.
T Consensus 96 ~~~~~~s~--~~l~~~~~d~-----~v~lw~~~~~~~~~~~~~~~--~------~~v~~v~~s~~~~~l~~~~~------ 154 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVALER-----NVYVWNADSGSVSALAETDE--S------TYVASVKWSHDGSFLSVGLG------ 154 (401)
T ss_dssp CBCEEECT--TSEEEEEETT-----EEEEEETTTCCEEEEEECCT--T------CCEEEEEECTTSSEEEEEET------
T ss_pred EEEEeecC--CCEEEEECCC-----eEEEeeCCCCcEeEeeecCC--C------CCEEEEEECCCCCEEEEECC------
Confidence 34466775 4455544332 34555 4455555544321 1 12369999999999988643
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEE
Q 004149 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 258 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l 258 (771)
...|.+||+.+++..... ......+..+.| +++. |
T Consensus 155 --------------------------------------dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~--~~~~----l 189 (401)
T 4aez_A 155 --------------------------------------NGLVDIYDVESQTKLRTM-AGHQARVGCLSW--NRHV----L 189 (401)
T ss_dssp --------------------------------------TSCEEEEETTTCCEEEEE-CCCSSCEEEEEE--ETTE----E
T ss_pred --------------------------------------CCeEEEEECcCCeEEEEe-cCCCCceEEEEE--CCCE----E
Confidence 257899999887754442 344456777888 4554 5
Q ss_pred EEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCC
Q 004149 259 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 338 (771)
Q Consensus 259 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~ 338 (771)
+..+ ....|.++|+.. .......+..+...+....|+|||+.|+..+.+.
T Consensus 190 ~~~~---------------~dg~i~i~d~~~---------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 239 (401)
T 4aez_A 190 SSGS---------------RSGAIHHHDVRI---------------ANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN 239 (401)
T ss_dssp EEEE---------------TTSEEEEEETTS---------------SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEc---------------CCCCEEEEeccc---------------CcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC
Confidence 5544 334788888720 1223455666777889999999999988877653
Q ss_pred CCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEE
Q 004149 339 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 418 (771)
Q Consensus 339 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~ 418 (771)
.|.+||+.++........ ....+..++|+|++..++++........|..+
T Consensus 240 -----------~v~iwd~~~~~~~~~~~~-------------------~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~ 289 (401)
T 4aez_A 240 -----------VVQIWDARSSIPKFTKTN-------------------HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW 289 (401)
T ss_dssp -----------CEEEEETTCSSEEEEECC-------------------CSSCCCEEEECTTSTTEEEEECCTTTCEEEEE
T ss_pred -----------eEEEccCCCCCccEEecC-------------------CcceEEEEEECCCCCCEEEEecCCCCCEEEEE
Confidence 488999877543211000 01135678899999888777642233456777
Q ss_pred ECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004149 419 NVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 419 d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~ 467 (771)
|+.+++..........+....|+++++.++.+....+ ..+.+.++.+
T Consensus 290 d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~d--g~i~v~~~~~ 336 (401)
T 4aez_A 290 NAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPD--NNLSIWSYSS 336 (401)
T ss_dssp ETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTT--CEEEEEEEET
T ss_pred ECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCC--CcEEEEecCC
Confidence 8888887665555555677789999998887653333 3566666654
No 332
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=99.16 E-value=2.8e-11 Score=134.21 Aligned_cols=133 Identities=23% Similarity=0.249 Sum_probs=93.0
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCC-CCCCCChhhhhcCCCCcc
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYR-GSLGFGEEALQSLPGKVG 593 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~r-G~~~~g~~~~~~~~~~~~ 593 (771)
+.|++.+ .+|.|......++.|+||++|||++...............+.|++|+.+||| |..++......... +
T Consensus 95 ~edcl~l--nv~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~~~~~~~la~~~g~vvv~~nYRlg~~gf~~~~~~~~~---~ 169 (542)
T 2h7c_A 95 SEDCLYL--NIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSR---G 169 (542)
T ss_dssp ESCCCEE--EEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCC---C
T ss_pred CCCCcEE--EEEECCCCCCCCCCCEEEEECCCcccCCCccccCHHHHHhcCCEEEEecCCCCccccCCCCCcccCc---c
Confidence 3455555 5788976544578999999999887654332211122334579999999999 43223222111112 2
Q ss_pred ccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHHh--CCCceeEEEecCCccc
Q 004149 594 SQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPLCN 652 (771)
Q Consensus 594 ~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~p~~~ 652 (771)
...+.|+.++++|+.++ ...|++||.|+|+|+||.++..++.. .+.+|+++|+.+|...
T Consensus 170 n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~ 233 (542)
T 2h7c_A 170 NWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 233 (542)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred chhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCcc
Confidence 33478999999999875 24799999999999999999998875 3578999999998764
No 333
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.15 E-value=4.1e-09 Score=112.42 Aligned_cols=204 Identities=9% Similarity=0.040 Sum_probs=129.2
Q ss_pred ccceEEEeCCCC-CeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecC-CCCeEEEEecCC
Q 004149 99 TGASAVVPSPSG-SKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNS-DETLIAYVAEEP 174 (771)
Q Consensus 99 ~~~~~~~~SPdG-~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSp-Dg~~la~~~~~~ 174 (771)
..+...+|||+| +.||.....+ .+.+| ..+......... +..+ .+.++.|+| |++.|+..+.
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~-~h~~------~v~~~~~~~~~~~~l~s~~~-- 139 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGG-----DIILWDYDVQNKTSFIQGM-GPGD------AITGMKFNQFNTNQLFVSSI-- 139 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTS-----CEEEEETTSTTCEEEECCC-STTC------BEEEEEEETTEEEEEEEEET--
T ss_pred CCEEEEEECCCCCCEEEEEcCCC-----eEEEEeCCCcccceeeecC-CcCC------ceeEEEeCCCCCCEEEEEeC--
Confidence 457889999999 7777665533 35555 333444443321 1111 236899999 6676666532
Q ss_pred CCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCC-CCCccceEEEecCCCC
Q 004149 175 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIP-KSLSVGQVVWAPLNEG 253 (771)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~-~~~~~~~~~wspDg~~ 253 (771)
...|.+||+.++....+.... ....+..++|+||++.
T Consensus 140 ------------------------------------------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 177 (383)
T 3ei3_B 140 ------------------------------------------RGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQM 177 (383)
T ss_dssp ------------------------------------------TTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTE
T ss_pred ------------------------------------------CCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCE
Confidence 267899999987776663211 1245788999999997
Q ss_pred CccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCC-EEE
Q 004149 254 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGK-FLV 332 (771)
Q Consensus 254 ~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~-~l~ 332 (771)
|+..+ .+..|+++|+ .+.....+..+...+....|+|+|+ .|+
T Consensus 178 ----l~~~~---------------~d~~i~i~d~-----------------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 221 (383)
T 3ei3_B 178 ----LATGD---------------STGRLLLLGL-----------------DGHEIFKEKLHKAKVTHAEFNPRCDWLMA 221 (383)
T ss_dssp ----EEEEE---------------TTSEEEEEET-----------------TSCEEEEEECSSSCEEEEEECSSCTTEEE
T ss_pred ----EEEEC---------------CCCCEEEEEC-----------------CCCEEEEeccCCCcEEEEEECCCCCCEEE
Confidence 77655 3347999997 5566677777777899999999999 555
Q ss_pred EEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCcccc-CCCEEEEEeeeCC
Q 004149 333 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS-DGCTMLLSSIWGS 411 (771)
Q Consensus 333 f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~-dg~~l~~~~~~~~ 411 (771)
..+.+ ..|.+||+.+.+.... ...... ....+..++|+| ||+.|+ +...++
T Consensus 222 s~~~d-----------~~i~iwd~~~~~~~~~------~~~~~~----------~~~~v~~~~~s~~~~~~l~-~~~~d~ 273 (383)
T 3ei3_B 222 TSSVD-----------ATVKLWDLRNIKDKNS------YIAEMP----------HEKPVNAAYFNPTDSTKLL-TTDQRN 273 (383)
T ss_dssp EEETT-----------SEEEEEEGGGCCSTTC------EEEEEE----------CSSCEEEEEECTTTSCEEE-EEESSS
T ss_pred EEeCC-----------CEEEEEeCCCCCcccc------eEEEec----------CCCceEEEEEcCCCCCEEE-EEcCCC
Confidence 54433 3588899876442111 011000 011345778999 998665 444454
Q ss_pred eeEEEEEECCCCc
Q 004149 412 SQVIISVNVSSGE 424 (771)
Q Consensus 412 ~~~l~~~d~~tg~ 424 (771)
. |..+|+.+++
T Consensus 274 ~--i~iwd~~~~~ 284 (383)
T 3ei3_B 274 E--IRVYSSYDWS 284 (383)
T ss_dssp E--EEEEETTBTT
T ss_pred c--EEEEECCCCc
Confidence 4 5555776654
No 334
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.15 E-value=6.7e-10 Score=128.81 Aligned_cols=244 Identities=11% Similarity=0.054 Sum_probs=148.3
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec---CCc----ceE-EEecCCcccccccCCCcccceeecCCCCeEEEE
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS---QSQ----LEK-EFHVPQTVHGSVYADGWFEGISWNSDETLIAYV 170 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~---~~~----~~~-~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~ 170 (771)
..+...+|+|++..+++....+ + .+.+|+ ... ..+ +...... +.+++|||||+.|+..
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D-~---~i~~W~~~~~~~~~~~~~~~~~~h~~~----------v~~v~~s~~g~~l~sg 448 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRD-K---SIILWKLTKDDKAYGVAQRRLTGHSHF----------VEDVVLSSDGQFALSG 448 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETT-S---EEEEEECCCSTTCSCEEEEEEECCSSC----------EEEEEECTTSSEEEEE
T ss_pred ceeEEEEecCCCCCEEEEEeCC-C---cEEEEEccCCCcccccccceecCCCCc----------EEEEEECCCCCEEEEE
Confidence 5588899999875544433322 2 455552 111 111 1111122 2689999999999988
Q ss_pred ecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeecc--CCCCCCccceEEEe
Q 004149 171 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK--GIPKSLSVGQVVWA 248 (771)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~--~~~~~~~~~~~~ws 248 (771)
+.+...+ .|+............+........|+++....+++..+..|.+||+.+.....+. .......+..+.|+
T Consensus 449 s~Dg~v~--vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 526 (694)
T 3dm0_A 449 SWDGELR--LWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFS 526 (694)
T ss_dssp ETTSEEE--EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEEC
T ss_pred eCCCcEE--EEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEe
Confidence 7765433 3443222222222334444556778888777777788899999998776555442 01223357789999
Q ss_pred cCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCC
Q 004149 249 PLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPD 327 (771)
Q Consensus 249 pDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpD 327 (771)
|++... +++++. .+..|.++|+ .+++ ...+..+...+.+..||||
T Consensus 527 ~~~~~~---~l~s~s--------------~d~~v~vwd~-----------------~~~~~~~~~~~h~~~v~~v~~spd 572 (694)
T 3dm0_A 527 PNTLQP---TIVSAS--------------WDKTVKVWNL-----------------SNCKLRSTLAGHTGYVSTVAVSPD 572 (694)
T ss_dssp SCSSSC---EEEEEE--------------TTSCEEEEET-----------------TTCCEEEEECCCSSCEEEEEECTT
T ss_pred CCCCcc---eEEEEe--------------CCCeEEEEEC-----------------CCCcEEEEEcCCCCCEEEEEEeCC
Confidence 998430 344331 2346888887 4444 4556667778999999999
Q ss_pred CCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEe
Q 004149 328 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 407 (771)
Q Consensus 328 G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~ 407 (771)
|+.|+..+.+. .|.+||+.+++....... ...+..++|+||+..|+. +
T Consensus 573 g~~l~sg~~Dg-----------~i~iwd~~~~~~~~~~~~--------------------~~~v~~~~~sp~~~~l~~-~ 620 (694)
T 3dm0_A 573 GSLCASGGKDG-----------VVLLWDLAEGKKLYSLEA--------------------NSVIHALCFSPNRYWLCA-A 620 (694)
T ss_dssp SSEEEEEETTS-----------BCEEEETTTTEEEECCBC--------------------SSCEEEEEECSSSSEEEE-E
T ss_pred CCEEEEEeCCC-----------eEEEEECCCCceEEEecC--------------------CCcEEEEEEcCCCcEEEE-E
Confidence 99988777553 588999877653211000 012346789999985543 3
Q ss_pred eeCCeeEEEEEECCCCcEEE
Q 004149 408 IWGSSQVIISVNVSSGELLR 427 (771)
Q Consensus 408 ~~~~~~~l~~~d~~tg~~~~ 427 (771)
. ++. |..+|+.+++...
T Consensus 621 ~-~~~--i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 621 T-EHG--IKIWDLESKSIVE 637 (694)
T ss_dssp E-TTE--EEEEETTTTEEEE
T ss_pred c-CCC--EEEEECCCCCChh
Confidence 2 333 6666888876543
No 335
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.14 E-value=1.5e-09 Score=116.89 Aligned_cols=183 Identities=13% Similarity=0.123 Sum_probs=115.6
Q ss_pred ceEEEEEccCCc--------eeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEeccc
Q 004149 218 PSLFVININSGE--------VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSL 289 (771)
Q Consensus 218 ~~l~v~d~~~~~--------~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 289 (771)
..|.+||+.++. ...+ ......+..+.|+|||+. +++++. .+..|.++|+
T Consensus 104 g~v~vw~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~----~l~s~~--------------~dg~i~iwd~-- 161 (402)
T 2aq5_A 104 CTVMVWEIPDGGLVLPLREPVITL--EGHTKRVGIVAWHPTAQN----VLLSAG--------------CDNVILVWDV-- 161 (402)
T ss_dssp SEEEEEECCTTCCSSCBCSCSEEE--ECCSSCEEEEEECSSBTT----EEEEEE--------------TTSCEEEEET--
T ss_pred CeEEEEEccCCCCccccCCceEEe--cCCCCeEEEEEECcCCCC----EEEEEc--------------CCCEEEEEEC--
Confidence 578999988763 2333 234456888999999976 666652 2347888898
Q ss_pred ccchhhhhhhhcCCCCCCc-ceec--CCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCcc
Q 004149 290 YKSEASELELKESSSEDLP-VVNL--TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE 366 (771)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~-~~~l--t~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~ 366 (771)
.+++ ...+ ..+...+....|+|||+.|+..+.+ ..|.+||+.+++....
T Consensus 162 ---------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------~~i~iwd~~~~~~~~~-- 213 (402)
T 2aq5_A 162 ---------------GTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-----------KRVRVIEPRKGTVVAE-- 213 (402)
T ss_dssp ---------------TTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-----------SEEEEEETTTTEEEEE--
T ss_pred ---------------CCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-----------CcEEEEeCCCCceeee--
Confidence 4444 3455 4566778999999999999887755 3589999877553111
Q ss_pred ceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcE--EEec-CCCCCceeeEEeec
Q 004149 367 KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL--LRIT-PAESNFSWSLLTLD 443 (771)
Q Consensus 367 ~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~--~~l~-~~~~~~~~~~~s~d 443 (771)
+.... .. ..+..+.|+||++.|+..........|..+|+.+++. .... .....+....|+++
T Consensus 214 -------~~~~~-~~-------~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 278 (402)
T 2aq5_A 214 -------KDRPH-EG-------TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPD 278 (402)
T ss_dssp -------EECSS-CS-------SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETT
T ss_pred -------eccCC-CC-------CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCC
Confidence 00000 00 1135678999998555443223445677778877553 2222 22334566789999
Q ss_pred CCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 444 GDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 444 ~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
++.|+++.... ..|.+.++.++
T Consensus 279 ~~~l~~~g~~d---g~i~i~d~~~~ 300 (402)
T 2aq5_A 279 TNIVYLCGKGD---SSIRYFEITSE 300 (402)
T ss_dssp TTEEEEEETTC---SCEEEEEECSS
T ss_pred CCEEEEEEcCC---CeEEEEEecCC
Confidence 99887766432 35777776544
No 336
>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A
Probab=99.13 E-value=5.8e-10 Score=112.79 Aligned_cols=106 Identities=15% Similarity=0.071 Sum_probs=69.2
Q ss_pred cEEEEEcCCCCCCCC-CcchHHHHHHHHC--CcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCC
Q 004149 538 PLIVVLHGGPHSVSL-SSYSKSLAFLSSV--GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 538 p~vv~~HGg~~~~~~-~~~~~~~~~la~~--G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 614 (771)
+.||++||.+.+... ..|...+..|++. |+.|+++|+ | +|.+..... .+.....+++...++.+......
T Consensus 6 ~pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G---~g~s~~~~~--~~~~~~~~~~~~~~~~l~~~~~l- 78 (279)
T 1ei9_A 6 LPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-G---KTLREDVEN--SFFLNVNSQVTTVCQILAKDPKL- 78 (279)
T ss_dssp CCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-S---SSHHHHHHH--HHHSCHHHHHHHHHHHHHSCGGG-
T ss_pred CcEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-C---CCCcccccc--ccccCHHHHHHHHHHHHHhhhhc-
Confidence 348999997655322 4688888888765 889999997 7 554321000 00011123333444444332111
Q ss_pred CCeEEEEEcChhHHHHHHHHHhCCCc-eeEEEecCCc
Q 004149 615 PSKVTVVGGSHGGFLTTHLIGQAPDK-FVAAAARNPL 650 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~~p~~-~~a~v~~~p~ 650 (771)
.+++.|+||||||.++..++.++|+. ++.+|+.++.
T Consensus 79 ~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p 115 (279)
T 1ei9_A 79 QQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQ 115 (279)
T ss_dssp TTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCC
T ss_pred cCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecCc
Confidence 26899999999999999999999984 9999877653
No 337
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=99.12 E-value=3.8e-11 Score=132.99 Aligned_cols=226 Identities=15% Similarity=0.092 Sum_probs=126.0
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCc-ch--HHHH-HHH-HCCcEEEEECCCCCC-CCC--hhhhh
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YS--KSLA-FLS-SVGYSLLIVNYRGSL-GFG--EEALQ 586 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~-~~--~~~~-~la-~~G~~V~~~d~rG~~-~~g--~~~~~ 586 (771)
+.|.+.+ .+|.|......++.|+||++|||++...... +. .++. .++ ..|++|+.+|||... ++. .....
T Consensus 102 sedcl~l--~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~~~~ 179 (544)
T 1thg_A 102 NEDCLYL--NVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDAITA 179 (544)
T ss_dssp CSCCCEE--EEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHH
T ss_pred CCCCeEE--EEEeCCCCCCCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCcccccc
Confidence 4455555 5788875444567899999999987654332 21 1222 222 358999999999643 110 00001
Q ss_pred cCCCCccccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHHhC--------CCceeEEEecCCccchhh
Q 004149 587 SLPGKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--------PDKFVAAAARNPLCNLAL 655 (771)
Q Consensus 587 ~~~~~~~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~--------p~~~~a~v~~~p~~~~~~ 655 (771)
.. .+...+.|+.++++|+.++. ..|++||.|+|+|.||.+++.++... ..+|+++|+.+|......
T Consensus 180 ~~---~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~~~~~ 256 (544)
T 1thg_A 180 EG---NTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGPLPYH 256 (544)
T ss_dssp HT---CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCCCCCS
T ss_pred cC---CCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccccccC
Confidence 11 22334889999999998862 37999999999999999998877652 457999999998542111
Q ss_pred hhcCCCCC-cc-hhhhhccCCCCCcCCCCCChhhHHHHhhcCccccccC-----------CCCcEEEEeeCCCCccCcHH
Q 004149 656 MVGTTDIP-DW-CYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISK-----------VKTPTIFLLGAQDLRVPVSN 722 (771)
Q Consensus 656 ~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~-----------i~~P~Lii~G~~D~~vp~~~ 722 (771)
........ .+ .+....++... ....+..+.++..++...+.. .....+......|..+.+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~gc~~~-----~~~~~~~~cLr~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~P~~Dg~~l~~~ 331 (544)
T 1thg_A 257 DSSSVGPDISYNRFAQYAGCDTS-----ASANDTLECLRSKSSSVLHDAQNSYDLKDLFGLLPQFLGFGPRPDGNIIPDA 331 (544)
T ss_dssp SSCCSSSSCHHHHHHHHHTCCTT-----SCHHHHHHHHHHSCHHHHHHHHHHHHHHHSTTTSCGGGTSCCCCCSSSSCSC
T ss_pred cCChHHHHHHHHHHHHHhCCCCC-----CCcHHHHHHHhcCCHHHHHHhhhhcccccccccccccccceeeeCCcccCcC
Confidence 11100100 11 11222222100 000012223333332211100 00000112334455555666
Q ss_pred HHHHHHHHHhCCCCEEEEEeCCCCccCC
Q 004149 723 GLQYARALREKGVETKVIVFPNDVHGIE 750 (771)
Q Consensus 723 ~~~~~~~l~~~g~~~~~~~~~~~~H~~~ 750 (771)
..++.+..+..++++.+-...+++|.+.
T Consensus 332 p~~~~~~g~~~~vp~l~G~~~~Eg~~f~ 359 (544)
T 1thg_A 332 AYELFRSGRYAKVPYISGNQEDEGTAFA 359 (544)
T ss_dssp HHHHHHTTCSCCCCEEEEEETBTTTTTG
T ss_pred HHHHHhcCCCCCccEEEEeecCchhhhc
Confidence 6676666656677888878888888764
No 338
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.12 E-value=2.3e-09 Score=112.16 Aligned_cols=241 Identities=11% Similarity=0.046 Sum_probs=145.4
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCc----ceEEEecCCcccccccCCCcccceeecCCCC-eEEEEecC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQ----LEKEFHVPQTVHGSVYADGWFEGISWNSDET-LIAYVAEE 173 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~-~la~~~~~ 173 (771)
+.+...+|||||+.|+.....+ .-.+|.+. .+. ...+...... +.+++|+|||+ .|+..+.
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~--~v~iw~~~-~~~~~~~~~~~~~~~~~----------v~~~~~~~~~~~~l~~~~~- 77 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDG--SLTVYKFD-IQAKNVDLLQSLRYKHP----------LLCCNFIDNTDLQIYVGTV- 77 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTS--EEEEEEEE-TTTTEEEEEEEEECSSC----------EEEEEEEESSSEEEEEEET-
T ss_pred CcEEEEEEcCCCCEEEEEcCCC--eEEEEEeC-CCCccccceeeeecCCc----------eEEEEECCCCCcEEEEEcC-
Confidence 4588899999999998775433 22233332 333 2222222222 26899999999 8887643
Q ss_pred CCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEc-cCCceeeccCCCCCCccceEEEecCCC
Q 004149 174 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI-NSGEVQAVKGIPKSLSVGQVVWAPLNE 252 (771)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~-~~~~~~~l~~~~~~~~~~~~~wspDg~ 252 (771)
...|++||+ .+++...+.+......+..+.|+| ++
T Consensus 78 -------------------------------------------dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~ 113 (342)
T 1yfq_A 78 -------------------------------------------QGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DD 113 (342)
T ss_dssp -------------------------------------------TSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TT
T ss_pred -------------------------------------------CCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CC
Confidence 257999999 999887773211556788999999 77
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCC---------CcceecCCCCcccccee
Q 004149 253 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED---------LPVVNLTESISSAFFPR 323 (771)
Q Consensus 253 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~---------~~~~~lt~~~~~~~~p~ 323 (771)
. |+..+ .+..|.++|+ .+ ++..........+....
T Consensus 114 ~----l~s~~---------------~d~~i~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 157 (342)
T 1yfq_A 114 K----LIAAS---------------WDGLIEVIDP-----------------RNYGDGVIAVKNLNSNNTKVKNKIFTMD 157 (342)
T ss_dssp E----EEEEE---------------TTSEEEEECH-----------------HHHTTBCEEEEESCSSSSSSCCCEEEEE
T ss_pred E----EEEEc---------------CCCeEEEEcc-----------------cccccccccccCCeeeEEeeCCceEEEE
Confidence 5 66554 3347888887 22 33222223556688899
Q ss_pred ecCCCCEEEEEecCCCCCCCCccccccceeeecCC-CCCCCCccceeeEEecccccCCCCCcccccCCCCCCcccc-CCC
Q 004149 324 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT-NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS-DGC 401 (771)
Q Consensus 324 ~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~-dg~ 401 (771)
|+|++ |+..+.+ ..|.+||+.+ +........ . . ....+..++|+| |++
T Consensus 158 ~~~~~--l~~~~~d-----------~~i~i~d~~~~~~~~~~~~~---------~----~----~~~~i~~i~~~~~~~~ 207 (342)
T 1yfq_A 158 TNSSR--LIVGMNN-----------SQVQWFRLPLCEDDNGTIEE---------S----G----LKYQIRDVALLPKEQE 207 (342)
T ss_dssp ECSSE--EEEEEST-----------TEEEEEESSCCTTCCCEEEE---------C----S----CSSCEEEEEECSGGGC
T ss_pred ecCCc--EEEEeCC-----------CeEEEEECCccccccceeee---------c----C----CCCceeEEEECCCCCC
Confidence 99998 5555433 3588999876 432110000 0 0 001245678999 998
Q ss_pred EEEEEeeeCCeeEEEEEECC-----CCcEEEecCCCC---------CceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004149 402 TMLLSSIWGSSQVIISVNVS-----SGELLRITPAES---------NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 402 ~l~~~~~~~~~~~l~~~d~~-----tg~~~~l~~~~~---------~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~ 467 (771)
.| ++...++...+|.++.. ......+..... .+....|+++++.|+....+ ..|++.++.+
T Consensus 208 ~l-~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~i~vwd~~~ 282 (342)
T 1yfq_A 208 GY-ACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD----GIISCWNLQT 282 (342)
T ss_dssp EE-EEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT----SCEEEEETTT
T ss_pred EE-EEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCC----ceEEEEcCcc
Confidence 55 45555777777776654 133334433321 45556788888877655432 2466766654
Q ss_pred c
Q 004149 468 K 468 (771)
Q Consensus 468 ~ 468 (771)
+
T Consensus 283 ~ 283 (342)
T 1yfq_A 283 R 283 (342)
T ss_dssp T
T ss_pred H
Confidence 3
No 339
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.12 E-value=4.3e-09 Score=109.96 Aligned_cols=276 Identities=14% Similarity=0.102 Sum_probs=145.9
Q ss_pred ceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEecC--CcceEEEecCCcccc
Q 004149 70 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQ--SQLEKEFHVPQTVHG 147 (771)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g 147 (771)
.++.|.+|++.......... ...+......+....|||||++|+...... ...+|.. .............
T Consensus 59 ~D~~i~vWd~~~~~~~~~~~-~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~-----~i~~~~~~~~~~~~~~~~~~~~-- 130 (340)
T 4aow_A 59 RDKTIIMWKLTRDETNYGIP-QRALRGHSHFVSDVVISSDGQFALSGSWDG-----TLRLWDLTTGTTTRRFVGHTKD-- 130 (340)
T ss_dssp TTSCEEEEEECCSSSCSEEE-EEEECCCSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEECCSSC--
T ss_pred CCCeEEEEECCCCCccccee-eEEEeCCCCCEEEEEECCCCCEEEEEcccc-----cceEEeecccceeeeecCCCCc--
Confidence 44567777775443221110 011111225688899999999998766543 4455522 2222222211111
Q ss_pred cccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCC-CCCCccCCCCCCcccccCCcCcc--cCCccCceEEEEE
Q 004149 148 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKG-GSSDKDCNSWKGQGDWEEDWGET--YAGKRQPSLFVIN 224 (771)
Q Consensus 148 ~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~g~~--~~~~~~~~l~v~d 224 (771)
.....++|+++.|+..+.+.... .|+...... ......+........|.++.... +.+.....|.+||
T Consensus 131 -------~~~~~~~~~~~~l~s~s~d~~~~--~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d 201 (340)
T 4aow_A 131 -------VLSVAFSSDNRQIVSGSRDKTIK--LWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 201 (340)
T ss_dssp -------EEEEEECTTSSCEEEEETTSCEE--EECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEE
T ss_pred -------eeEEEEeecCccceeecCCCeEE--EEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEE
Confidence 14778999999998877654322 122110000 00111111222223344443222 2344567899999
Q ss_pred ccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCC
Q 004149 225 INSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSS 304 (771)
Q Consensus 225 ~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 304 (771)
+.+++..... ......+..++|+|||+. |+..+ .+..|.++|+
T Consensus 202 ~~~~~~~~~~-~~h~~~v~~~~~s~~~~~----l~s~s---------------~Dg~i~iwd~----------------- 244 (340)
T 4aow_A 202 LANCKLKTNH-IGHTGYLNTVTVSPDGSL----CASGG---------------KDGQAMLWDL----------------- 244 (340)
T ss_dssp TTTTEEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------TTCEEEEEET-----------------
T ss_pred CCCCceeeEe-cCCCCcEEEEEECCCCCE----EEEEe---------------CCCeEEEEEe-----------------
Confidence 9988765542 334456788999999996 66655 3347888887
Q ss_pred CCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCc
Q 004149 305 EDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFP 384 (771)
Q Consensus 305 ~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 384 (771)
.+.+..........+....|+|++..++ .+.+ ..|.+||+.++......... .. ...+.
T Consensus 245 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~d-----------~~i~iwd~~~~~~~~~~~~~--~~-------~~~~~ 303 (340)
T 4aow_A 245 NEGKHLYTLDGGDIINALCFSPNRYWLC-AATG-----------PSIKIWDLEGKIIVDELKQE--VI-------STSSK 303 (340)
T ss_dssp TTTEEEEEEECSSCEEEEEECSSSSEEE-EEET-----------TEEEEEETTTTEEEEEECCC----------------
T ss_pred ccCceeeeecCCceEEeeecCCCCceee-ccCC-----------CEEEEEECCCCeEEEecccc--ce-------eeecc
Confidence 4444433333445677889999987554 3322 34888888765431110000 00 00000
Q ss_pred ccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc
Q 004149 385 GLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 424 (771)
Q Consensus 385 g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~ 424 (771)
.....+..++|+|||+.| ++...++...||.+ .+|+
T Consensus 304 -~h~~~v~~l~~s~dg~~l-~sgs~Dg~v~iW~~--~tGt 339 (340)
T 4aow_A 304 -AEPPQCTSLAWSADGQTL-FAGYTDNLVRVWQV--TIGT 339 (340)
T ss_dssp -CCCCCEEEEEECTTSSEE-EEEETTSCEEEEEE--EC--
T ss_pred -CCCCCEEEEEECCCCCEE-EEEeCCCEEEEEeC--CCcC
Confidence 011234567899999865 55666777677754 4554
No 340
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.12 E-value=1.8e-09 Score=115.68 Aligned_cols=273 Identities=12% Similarity=0.051 Sum_probs=154.9
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCc------ceEEEec-CCcccccccCCCcccceeecCC----C-
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQ------LEKEFHV-PQTVHGSVYADGWFEGISWNSD----E- 164 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~------~~~~~~~-~~~~~g~~~~~~~~~~~~wSpD----g- 164 (771)
..+...+|+| +.|+..+..+ .+.+| ..+. ....+.. ... +.++.|+|| |
T Consensus 17 ~~i~~~~~~~--~~l~s~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~h~~~----------v~~~~~~~~~~~~g~ 79 (397)
T 1sq9_A 17 ADIFSVSACN--SFTVSCSGDG-----YLKVWDNKLLDNENPKDKSYSHFVHKSG----------LHHVDVLQAIERDAF 79 (397)
T ss_dssp SCEEEEEECS--SEEEEEETTS-----EEEEEESBCCTTCCGGGGEEEEECCTTC----------EEEEEEEEEEETTTE
T ss_pred cCeEEEEecC--CeEEEEcCCC-----EEEEEECCCcccccCCCcceEEecCCCc----------EEEEEEecccccCCc
Confidence 4578899999 6776655433 44555 3333 2222221 222 268999999 9
Q ss_pred --CeEEEEecCCCCCCCCccCCCCCC-----CCCCccC-----CCCCCccccc----CCcCc-ccCCccCceEEEEEccC
Q 004149 165 --TLIAYVAEEPSPSKPTFSLGSTKG-----GSSDKDC-----NSWKGQGDWE----EDWGE-TYAGKRQPSLFVININS 227 (771)
Q Consensus 165 --~~la~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-----~~~~~~~~~~----~d~g~-~~~~~~~~~l~v~d~~~ 227 (771)
+.|+..+.+.... .|+...... ......+ ........|. ++... .+++.....|++||+.+
T Consensus 80 ~~~~l~s~~~dg~i~--iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 157 (397)
T 1sq9_A 80 ELCLVATTSFSGDLL--FYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHP 157 (397)
T ss_dssp EEEEEEEEETTSCEE--EEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEES
T ss_pred cccEEEEEcCCCCEE--EEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCc
Confidence 9888877655332 233211111 1111112 1334456788 88666 66777788999999987
Q ss_pred ------Ccee------eccC-----CCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccc
Q 004149 228 ------GEVQ------AVKG-----IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLY 290 (771)
Q Consensus 228 ------~~~~------~l~~-----~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~ 290 (771)
++.. .+.+ ......+..+.|+||| . |+..+ ....|+++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~----l~~~~---------------~dg~i~i~d~--- 214 (397)
T 1sq9_A 158 FADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-L----IATGF---------------NNGTVQISEL--- 214 (397)
T ss_dssp SSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-E----EEEEC---------------TTSEEEEEET---
T ss_pred cccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-e----EEEEe---------------CCCcEEEEEC---
Confidence 4432 2211 1234467889999999 8 88776 3347888998
Q ss_pred cchhhhhhhhcCCCCCCcc-eecCC---C---CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCC
Q 004149 291 KSEASELELKESSSEDLPV-VNLTE---S---ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS 363 (771)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~-~~lt~---~---~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~ 363 (771)
.+++. ..+.. + ...+....|+|||+.|+..+.+. ....|.+||+.+++...
T Consensus 215 --------------~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~--------~~g~i~i~d~~~~~~~~ 272 (397)
T 1sq9_A 215 --------------STLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN--------SFGCITLYETEFGERIG 272 (397)
T ss_dssp --------------TTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET--------TEEEEEEEETTTCCEEE
T ss_pred --------------CCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC--------CCceEEEEECCCCcccc
Confidence 44443 34444 4 66788999999999988776541 11468999988765321
Q ss_pred CccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecC-------C-----
Q 004149 364 SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP-------A----- 431 (771)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~-------~----- 431 (771)
............ -..+ .....+..++|+||++.|+ +...++ .|..+|+.+++...... .
T Consensus 273 ~~~~~~~~~~~~----~~~~--~~~~~v~~~~~~~~~~~l~-~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
T 1sq9_A 273 SLSVPTHSSQAS----LGEF--AHSSWVMSLSFNDSGETLC-SAGWDG--KLRFWDVKTKERITTLNMHCDDIEIEEDIL 343 (397)
T ss_dssp EECBC------------CCB--SBSSCEEEEEECSSSSEEE-EEETTS--EEEEEETTTTEEEEEEECCGGGCSSGGGCC
T ss_pred eeccCccccccc----cccc--ccCCcEEEEEECCCCCEEE-EEeCCC--eEEEEEcCCCceeEEEecccCcccchhhhh
Confidence 111100000000 0000 0112345788999998664 444444 45556887777554433 2
Q ss_pred ----------CCCceeeEEeecC
Q 004149 432 ----------ESNFSWSLLTLDG 444 (771)
Q Consensus 432 ----------~~~~~~~~~s~d~ 444 (771)
...+....|++++
T Consensus 344 ~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 344 AVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp CBCTTSCBCSSCCEEEEEEECTT
T ss_pred ccccccccccCCceeEEEecccc
Confidence 3345667888887
No 341
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.12 E-value=1.2e-08 Score=106.52 Aligned_cols=275 Identities=7% Similarity=-0.093 Sum_probs=152.1
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCC--ccceeecCCccccccceEEEeCCCCC-eEEEEecCCCCCCeE
Q 004149 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENEN--SVTFQWAPFPVEMTGASAVVPSPSGS-KLLVVRNPENESPIQ 126 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~lt~~~~~~~~~~~~~~~~SPdG~-~la~~~~~~~~~~~~ 126 (771)
++||..|+... ..+.+++|++...... ...+... ...+...+|+|+|+ .|+.....+ .
T Consensus 20 s~~~~~l~~~~---------~d~~v~iw~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~~~dg-----~ 80 (342)
T 1yfq_A 20 IPSKSLLLITS---------WDGSLTVYKFDIQAKNVDLLQSLRY-----KHPLLCCNFIDNTDLQIYVGTVQG-----E 80 (342)
T ss_dssp EGGGTEEEEEE---------TTSEEEEEEEETTTTEEEEEEEEEC-----SSCEEEEEEEESSSEEEEEEETTS-----C
T ss_pred cCCCCEEEEEc---------CCCeEEEEEeCCCCccccceeeeec-----CCceEEEEECCCCCcEEEEEcCCC-----e
Confidence 45777766542 3356777777544311 2222222 25688899999999 887765433 3
Q ss_pred EEEe-c-CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccc
Q 004149 127 FELW-S-QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 204 (771)
Q Consensus 127 ~~~~-~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (771)
+.+| . .......+.. .... ..+..+.|+| ++.|+..+.
T Consensus 81 i~~wd~~~~~~~~~~~~-~~~~------~~v~~l~~~~-~~~l~s~~~-------------------------------- 120 (342)
T 1yfq_A 81 ILKVDLIGSPSFQALTN-NEAN------LGICRICKYG-DDKLIAASW-------------------------------- 120 (342)
T ss_dssp EEEECSSSSSSEEECBS-CCCC------SCEEEEEEET-TTEEEEEET--------------------------------
T ss_pred EEEEEeccCCceEeccc-cCCC------CceEEEEeCC-CCEEEEEcC--------------------------------
Confidence 4455 3 3322222211 0011 1236899999 888887643
Q ss_pred cCCcCcccCCccCceEEEEEccC---------CceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeee
Q 004149 205 EEDWGETYAGKRQPSLFVININS---------GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYC 275 (771)
Q Consensus 205 ~~d~g~~~~~~~~~~l~v~d~~~---------~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~ 275 (771)
...|.+||+.+ ++.... ......+..+.|+|++ |+..+
T Consensus 121 ------------d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~------l~~~~------------- 167 (342)
T 1yfq_A 121 ------------DGLIEVIDPRNYGDGVIAVKNLNSNN--TKVKNKIFTMDTNSSR------LIVGM------------- 167 (342)
T ss_dssp ------------TSEEEEECHHHHTTBCEEEEESCSSS--SSSCCCEEEEEECSSE------EEEEE-------------
T ss_pred ------------CCeEEEEcccccccccccccCCeeeE--EeeCCceEEEEecCCc------EEEEe-------------
Confidence 25788999876 554433 3345567788999875 44443
Q ss_pred ccCCceeEEEecccccchhhhhhhhcCCCCC-Cc---ceecCCCCccccceeecC-CCCEEEEEecCCCCCCCCcccccc
Q 004149 276 YNRPCALYAVRVSLYKSEASELELKESSSED-LP---VVNLTESISSAFFPRFSP-DGKFLVFLSAKSSVDSGAHSATDS 350 (771)
Q Consensus 276 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~---~~~lt~~~~~~~~p~~Sp-DG~~l~f~~~~~~~~~g~~~~~~~ 350 (771)
....|+++|+ .. +. ..........+....|+| ||+.|+..+.+. .
T Consensus 168 --~d~~i~i~d~-----------------~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg-----------~ 217 (342)
T 1yfq_A 168 --NNSQVQWFRL-----------------PLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDG-----------R 217 (342)
T ss_dssp --STTEEEEEES-----------------SCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTS-----------E
T ss_pred --CCCeEEEEEC-----------------CccccccceeeecCCCCceeEEEECCCCCCEEEEEecCC-----------c
Confidence 2347888887 33 22 123334455688999999 999888777542 4
Q ss_pred ceeeecCCCCCCCCccceeeEEecccccCCCCCcc-cccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 004149 351 LHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPG-LYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 429 (771)
Q Consensus 351 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 429 (771)
|.+|++..+.......... . +...... ..+ -....+..++|+||++.|+ +...++. |+.+|+.+++.....
T Consensus 218 i~i~~~~~~~~~~~~~~~~-~---~~~~~~~-~~~~~~~~~i~~~~~s~~~~~l~-~~~~dg~--i~vwd~~~~~~~~~~ 289 (342)
T 1yfq_A 218 VAVEFFDDQGDDYNSSKRF-A---FRCHRLN-LKDTNLAYPVNSIEFSPRHKFLY-TAGSDGI--ISCWNLQTRKKIKNF 289 (342)
T ss_dssp EEEEECCTTCCSTTCTTCE-E---EECCCCC-TTCCSSCCCEEEEEECTTTCCEE-EEETTSC--EEEEETTTTEEEEEC
T ss_pred EEEEEEcCCCcccccccce-e---eeccccc-ccccccceeEEEEEEcCCCCEEE-EecCCce--EEEEcCccHhHhhhh
Confidence 6777766541000000000 0 0000000 000 0011345678999998664 4444444 555688888765544
Q ss_pred CCC-CCceeeEEeecCCEEEEEEeCCC
Q 004149 430 PAE-SNFSWSLLTLDGDNIIAVSSSPV 455 (771)
Q Consensus 430 ~~~-~~~~~~~~s~d~~~l~~~~s~~~ 455 (771)
... .. ....+.++++.|+....+..
T Consensus 290 ~~~h~~-~v~~~~~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 290 AKFNED-SVVKIACSDNILCLATSDDT 315 (342)
T ss_dssp CCCSSS-EEEEEEECSSEEEEEEECTH
T ss_pred hcccCC-CceEecCCCCeEEEEecCCc
Confidence 432 21 12223388888877765543
No 342
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.12 E-value=1.3e-08 Score=106.03 Aligned_cols=261 Identities=12% Similarity=0.140 Sum_probs=138.7
Q ss_pred cccceeEEEEEEeecCCCCccc-eeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCC-------cceEE
Q 004149 67 ANKRKKFMLSTVISKENENSVT-FQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS-------QLEKE 138 (771)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~-lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~-------~~~~~ 138 (771)
.....+.+.++++..+...... +... .....+...+|||+|+.||..+... .+.+|+-. ....+
T Consensus 29 s~~~D~~i~lw~~~~~~~~~~~~~~~~---~h~~~v~~v~~sp~~~~las~s~D~-----~v~iw~~~~~~~~~~~~~~~ 100 (330)
T 2hes_X 29 TGSTDRKIKLVSVKYDDFTLIDVLDET---AHKKAIRSVAWRPHTSLLAAGSFDS-----TVSIWAKEESADRTFEMDLL 100 (330)
T ss_dssp EEESSSCEEEEECSSSCCEEEEEECTT---CCCSCEEEEEECTTSSEEEEEETTS-----CEEEEEC-------CCCEEE
T ss_pred EEcCCCEEEEEEecCCCeEEEEEEecC---CccCCEEEEEECCCCCEEEEEeCCC-----cEEEEEcccCcCccccceeE
Confidence 3344566777776433211111 1111 0224588899999999998776543 34555211 11111
Q ss_pred EecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCc
Q 004149 139 FHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQP 218 (771)
Q Consensus 139 ~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~ 218 (771)
..+. +..+ .+.+++|||||++|+..+.+ .
T Consensus 101 ~~~~-~h~~------~V~~v~~sp~g~~las~s~D--------------------------------------------~ 129 (330)
T 2hes_X 101 AIIE-GHEN------EVKGVAWSNDGYYLATCSRD--------------------------------------------K 129 (330)
T ss_dssp EEEC-----------CEEEEEECTTSCEEEEEETT--------------------------------------------S
T ss_pred EEEc-CCCC------cEEEEEECCCCCEEEEEeCC--------------------------------------------C
Confidence 1111 1111 23689999999999886543 5
Q ss_pred eEEEEEcc-CCc----eeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccch
Q 004149 219 SLFVININ-SGE----VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 293 (771)
Q Consensus 219 ~l~v~d~~-~~~----~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 293 (771)
.|.+||+. ++. ...+ ......+..+.|+||++. |+..+. +..|.++|+
T Consensus 130 ~v~iwd~~~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~----l~s~s~---------------D~~i~iW~~------ 182 (330)
T 2hes_X 130 SVWIWETDESGEEYECISVL--QEHSQDVKHVIWHPSEAL----LASSSY---------------DDTVRIWKD------ 182 (330)
T ss_dssp CEEEEECCTTCCCCEEEEEE--CCCSSCEEEEEECSSSSE----EEEEET---------------TSCEEEEEE------
T ss_pred EEEEEeccCCCCCeEEEEEe--ccCCCceEEEEECCCCCE----EEEEcC---------------CCeEEEEEC------
Confidence 68889984 322 2233 334456888999999987 776652 225666665
Q ss_pred hhhhhhhcCCCCCC---cceecCCCCccccceeecCC--CCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccce
Q 004149 294 ASELELKESSSEDL---PVVNLTESISSAFFPRFSPD--GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKI 368 (771)
Q Consensus 294 ~~~~~~~~~~~~~~---~~~~lt~~~~~~~~p~~SpD--G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~ 368 (771)
..+ ....+..+...+....|+|+ +..|+..+.+. .|.+||+.++..... ..
T Consensus 183 -----------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~-----------~v~iw~~~~~~~~~~--~~ 238 (330)
T 2hes_X 183 -----------YDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS-----------TVRVWKYMGDDEDDQ--QE 238 (330)
T ss_dssp -----------ETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS-----------CEEEEEEEEECTTSC--EE
T ss_pred -----------CCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC-----------eEEEEEecCCCcccc--ce
Confidence 222 23456667777889999999 66676665543 477777654322100 00
Q ss_pred eeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEE---ecC-CCC-CceeeEEee-
Q 004149 369 VDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLR---ITP-AES-NFSWSLLTL- 442 (771)
Q Consensus 369 ~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~---l~~-~~~-~~~~~~~s~- 442 (771)
......+ ++.+...+..++|++++ ++++...++...||.+. +++.+. ... ... .+....|++
T Consensus 239 ~~~~~~~--------~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~--~~~~~~~~~~~~~h~~~~v~~v~~~~~ 306 (330)
T 2hes_X 239 WVCEAIL--------PDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEV--DGEWKVFAKRALCHGVYEINVVKWLEL 306 (330)
T ss_dssp EEEEEEC--------CSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEE--TTEEEEEEEESCTTTTSCEEEEEEC--
T ss_pred eEEeeec--------ccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcC--CCceEEEeccccccccceEEEEEEecC
Confidence 0011111 11111234567899765 44566667777777654 554322 212 222 344456777
Q ss_pred -cCCEEEE
Q 004149 443 -DGDNIIA 449 (771)
Q Consensus 443 -d~~~l~~ 449 (771)
+++.|+.
T Consensus 307 ~~~~~las 314 (330)
T 2hes_X 307 NGKTILAT 314 (330)
T ss_dssp ---CCEEE
T ss_pred CCceEEEE
Confidence 4544443
No 343
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.11 E-value=6.6e-10 Score=118.63 Aligned_cols=271 Identities=10% Similarity=0.016 Sum_probs=144.8
Q ss_pred cccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcc---eEEEecCC
Q 004149 67 ANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQL---EKEFHVPQ 143 (771)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 143 (771)
.....+.+.+|++.... ....+... ...+...+|||||++||..... +...+|.+...... ..+...-.
T Consensus 83 s~s~D~~v~iWd~~~~~-~~~~~~~h-----~~~v~~~~~s~~g~~las~~~d--~~v~iw~~~~~~~~~~~~~~~~~~~ 154 (380)
T 3iz6_a 83 SASQDGRLIVWNALTSQ-KTHAIKLH-----CPWVMECAFAPNGQSVACGGLD--SACSIFNLSSQADRDGNMPVSRVLT 154 (380)
T ss_dssp EEETTSEEEEEETTTTE-EEEEEECC-----CTTCCCCEECTTSSEEEECCSS--SCCEEEECCCCSSCCCSSTTCCBCC
T ss_pred EEeCCCeEEEEECCCCc-cceEEecC-----CCCEEEEEECCCCCEEEEeeCC--CcEEEEECCCCccccCCccceeecc
Confidence 33455677777763321 11222211 2447778999999999765432 34445544311100 00000101
Q ss_pred cccccccCCCcccceeecCCCC-eEEEEecCCCCCCCCccCCCCCCCCC-----CccCCCCCCcccccC-CcCcccCCcc
Q 004149 144 TVHGSVYADGWFEGISWNSDET-LIAYVAEEPSPSKPTFSLGSTKGGSS-----DKDCNSWKGQGDWEE-DWGETYAGKR 216 (771)
Q Consensus 144 ~~~g~~~~~~~~~~~~wSpDg~-~la~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-d~g~~~~~~~ 216 (771)
+..+ ......|+|++. .|+..+.+...+ .|+......... ...+........+.+ +....+++..
T Consensus 155 gh~~------~v~~~~~~~~~~~~l~s~s~D~~i~--~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~ 226 (380)
T 3iz6_a 155 GHKG------YASSCQYVPDQETRLITGSGDQTCV--LWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSC 226 (380)
T ss_dssp CCSS------CCCCCBCCSSSSSCEEEECTTSCEE--EECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEET
T ss_pred CCCc------ceEEEEEecCCCCEEEEECCCCcEE--EEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEEC
Confidence 1111 225788999754 566666554332 343222111100 011122222333433 3333445566
Q ss_pred CceEEEEEccC-Cc-eeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchh
Q 004149 217 QPSLFVININS-GE-VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 294 (771)
Q Consensus 217 ~~~l~v~d~~~-~~-~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 294 (771)
+..|.+||+.. ++ ...+ ......+..++|+|||+. |+..+ .+..|.++|+
T Consensus 227 D~~v~~wd~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~----l~s~s---------------~D~~i~lwd~------- 278 (380)
T 3iz6_a 227 DTTVRLWDLRITSRAVRTY--HGHEGDINSVKFFPDGQR----FGTGS---------------DDGTCRLFDM------- 278 (380)
T ss_dssp TSCEEEEETTTTCCCCEEE--CCCSSCCCEEEECTTSSE----EEEEC---------------SSSCEEEEET-------
T ss_pred CCeEEEEECCCCCcceEEE--CCcCCCeEEEEEecCCCe----EEEEc---------------CCCeEEEEEC-------
Confidence 78999999863 33 3444 344557889999999997 77665 3346888887
Q ss_pred hhhhhhcCCCCCCcce-ecCCC-------CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCcc
Q 004149 295 SELELKESSSEDLPVV-NLTES-------ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE 366 (771)
Q Consensus 295 ~~~~~~~~~~~~~~~~-~lt~~-------~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~ 366 (771)
.++... .+... ...+...+|||||+.|+..+.+ ..|++||+.+++.....
T Consensus 279 ----------~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-----------g~i~vwd~~~~~~~~~~- 336 (380)
T 3iz6_a 279 ----------RTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN-----------GDCYVWDTLLAEMVLNL- 336 (380)
T ss_dssp ----------TTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT-----------SCEEEEETTTCCEEEEE-
T ss_pred ----------CCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC-----------CCEEEEECCCCceEEEE-
Confidence 444322 22211 1236789999999988766544 35889998765531100
Q ss_pred ceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEE
Q 004149 367 KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 418 (771)
Q Consensus 367 ~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~ 418 (771)
... ...+...+..++|+|||+.| ++.+.++...||.+
T Consensus 337 ------~~~--------~~~h~~~v~~l~~s~dg~~l-~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 337 ------GTL--------QNSHEGRISCLGLSSDGSAL-CTGSWDKNLKIWAF 373 (380)
T ss_dssp ------CCS--------CSSCCCCCCEEEECSSSSEE-EEECTTSCEEEEEC
T ss_pred ------ecc--------cCCCCCceEEEEECCCCCEE-EEeeCCCCEEEEec
Confidence 000 00011245678899999855 66667777777744
No 344
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.10 E-value=2.2e-08 Score=102.53 Aligned_cols=251 Identities=14% Similarity=0.036 Sum_probs=145.8
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCC
Q 004149 101 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 180 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 180 (771)
...|+|+|+|+.|+++.... ..++.++..+. .+........ ..++.|+|||+.++.. .
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~---~~i~~~~~~~~-~~~~~~~~~~---------~~~l~~~~dg~l~v~~--~------- 87 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQ---NRTWAWSDDGQ-LSPEMHPSHH---------QNGHCLNKQGHLIACS--H------- 87 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGG---TEEEEEETTSC-EEEEESSCSS---------EEEEEECTTCCEEEEE--T-------
T ss_pred ccCCeEeCCCCEEEEEeCCC---CEEEEEECCCC-eEEEECCCCC---------cceeeECCCCcEEEEe--c-------
Confidence 56799999999887775433 35777773333 3333322211 1588999999844332 1
Q ss_pred ccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCC---CCccceEEEecCCCCCccE
Q 004149 181 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK---SLSVGQVVWAPLNEGLHQY 257 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~---~~~~~~~~wspDg~~~~~~ 257 (771)
....|+++|..+|+.+.+..... ...+..++++|||+
T Consensus 88 -----------------------------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~----- 127 (296)
T 3e5z_A 88 -----------------------------------GLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGS----- 127 (296)
T ss_dssp -----------------------------------TTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSC-----
T ss_pred -----------------------------------CCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCC-----
Confidence 12578999998888766621111 12456789999997
Q ss_pred EEEEeecCcce--eeeeee-eccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEE
Q 004149 258 LVFVGWSSETR--KLGIKY-CYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFL 334 (771)
Q Consensus 258 l~~~~~~~~~~--~~g~~~-~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~ 334 (771)
|+++....+.. ..+... .......||.++. . ++.+.+.........++|||||+.| +.
T Consensus 128 l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~-----------------~-g~~~~~~~~~~~~~gi~~s~dg~~l-v~ 188 (296)
T 3e5z_A 128 LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAP-----------------D-GTLSAPIRDRVKPNGLAFLPSGNLL-VS 188 (296)
T ss_dssp EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECT-----------------T-SCEEEEECCCSSEEEEEECTTSCEE-EE
T ss_pred EEEECCccccccccccccccccCCCcEEEEECC-----------------C-CCEEEeecCCCCCccEEECCCCCEE-EE
Confidence 66652100000 000000 0011347999986 4 5566665555556789999999988 65
Q ss_pred ecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeE
Q 004149 335 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 414 (771)
Q Consensus 335 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 414 (771)
.... ..|+++++...+. +... ..++ .. .. ..+..+++++||+ |+++. ...
T Consensus 189 ~~~~----------~~i~~~~~~~~g~--~~~~----~~~~-~~-~~-------~~p~~i~~d~~G~-l~v~~----~~~ 238 (296)
T 3e5z_A 189 DTGD----------NATHRYCLNARGE--TEYQ----GVHF-TV-EP-------GKTDGLRVDAGGL-IWASA----GDG 238 (296)
T ss_dssp ETTT----------TEEEEEEECSSSC--EEEE----EEEE-CC-SS-------SCCCSEEEBTTSC-EEEEE----TTE
T ss_pred eCCC----------CeEEEEEECCCCc--CcCC----CeEe-eC-CC-------CCCCeEEECCCCC-EEEEc----CCe
Confidence 5432 4689998863221 1000 0111 00 01 1235678999997 65554 245
Q ss_pred EEEEECCCCcEEEecCCCCCceeeEE-eecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 415 IISVNVSSGELLRITPAESNFSWSLL-TLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 415 l~~~d~~tg~~~~l~~~~~~~~~~~~-s~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
|++++.++..+..+..... .....| +++++.|+.+..+ .|++++..+.
T Consensus 239 v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-----~l~~~~~~~~ 287 (296)
T 3e5z_A 239 VHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVST-----EFWSIETNVR 287 (296)
T ss_dssp EEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEETT-----EEEEEECSCC
T ss_pred EEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEcCC-----eEEEEEcccc
Confidence 8888987555556655444 555677 4788888877643 6888776543
No 345
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.09 E-value=7.4e-09 Score=115.58 Aligned_cols=236 Identities=8% Similarity=-0.028 Sum_probs=139.4
Q ss_pred EeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccC
Q 004149 105 VPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSL 183 (771)
Q Consensus 105 ~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~ 183 (771)
.+||+|+.+ +.... ...+.+++ ..++....+...... ..+.|||||++|+..+.+
T Consensus 144 ~~~p~~~~~--vs~~~--d~~V~v~D~~t~~~~~~i~~g~~~----------~~v~~spdg~~l~v~~~d---------- 199 (543)
T 1nir_A 144 DLDLPNLFS--VTLRD--AGQIALVDGDSKKIVKVIDTGYAV----------HISRMSASGRYLLVIGRD---------- 199 (543)
T ss_dssp CCCGGGEEE--EEEGG--GTEEEEEETTTCCEEEEEECSTTE----------EEEEECTTSCEEEEEETT----------
T ss_pred ccCCCCEEE--EEEcC--CCeEEEEECCCceEEEEEecCccc----------ceEEECCCCCEEEEECCC----------
Confidence 478988533 33332 22354444 445555544433333 388899999988775321
Q ss_pred CCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEc--cCCceeeccCCCCCCccceEEEec----CCCCCccE
Q 004149 184 GSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI--NSGEVQAVKGIPKSLSVGQVVWAP----LNEGLHQY 257 (771)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~--~~~~~~~l~~~~~~~~~~~~~wsp----Dg~~~~~~ 257 (771)
..|.+||+ .++++... ++....+..++||| ||+.
T Consensus 200 ----------------------------------~~V~v~D~~~~t~~~~~~--i~~g~~p~~va~sp~~~~dg~~---- 239 (543)
T 1nir_A 200 ----------------------------------ARIDMIDLWAKEPTKVAE--IKIGIEARSVESSKFKGYEDRY---- 239 (543)
T ss_dssp ----------------------------------SEEEEEETTSSSCEEEEE--EECCSEEEEEEECCSTTCTTTE----
T ss_pred ----------------------------------CeEEEEECcCCCCcEEEE--EecCCCcceEEeCCCcCCCCCE----
Confidence 57999999 77765443 33444678899999 9996
Q ss_pred EEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcce-ecCCC-----------Cccccceeec
Q 004149 258 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NLTES-----------ISSAFFPRFS 325 (771)
Q Consensus 258 l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~lt~~-----------~~~~~~p~~S 325 (771)
|+.... ....|.++|. .++++. .+... ...+....+|
T Consensus 240 l~v~~~--------------~~~~v~v~D~-----------------~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s 288 (543)
T 1nir_A 240 TIAGAY--------------WPPQFAIMDG-----------------ETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIAS 288 (543)
T ss_dssp EEEEEE--------------ESSEEEEEET-----------------TTCCEEEEEECCEECSSSCCEESCCCEEEEEEC
T ss_pred EEEEEc--------------cCCeEEEEec-----------------cccccceeecccCcccCccccccCCceEEEEEC
Confidence 655441 1236778886 555432 22211 1145678999
Q ss_pred CCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEE
Q 004149 326 PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLL 405 (771)
Q Consensus 326 pDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~ 405 (771)
|||+.+++.... ...|+++|..+.+...++ .++ .+. .+..+.|+|||++++.
T Consensus 289 ~~~~~~~vs~~~----------~g~i~vvd~~~~~~l~~~-----~i~------~~~-------~~~~~~~spdg~~l~v 340 (543)
T 1nir_A 289 HEHPEFIVNVKE----------TGKVLLVNYKDIDNLTVT-----SIG------AAP-------FLHDGGWDSSHRYFMT 340 (543)
T ss_dssp SSSSEEEEEETT----------TTEEEEEECTTSSSCEEE-----EEE------CCS-------SCCCEEECTTSCEEEE
T ss_pred CCCCEEEEEECC----------CCeEEEEEecCCCcceeE-----Eec------cCc-------CccCceECCCCCEEEE
Confidence 999987665543 257999998775432110 000 011 2356789999998876
Q ss_pred EeeeCCeeEEEEEECCCCcEEEecCCCC----CceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004149 406 SSIWGSSQVIISVNVSSGELLRITPAES----NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 406 ~~~~~~~~~l~~~d~~tg~~~~l~~~~~----~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~ 467 (771)
+....+. |..+|..++++........ ......++++++.++++.+... ..|.+.+..+
T Consensus 341 a~~~~~~--v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d--~~V~v~d~~~ 402 (543)
T 1nir_A 341 AANNSNK--VAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGD--GSISLIGTDP 402 (543)
T ss_dssp EEGGGTE--EEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSS--SEEEEEECCT
T ss_pred EecCCCe--EEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCC--ceEEEEEeCC
Confidence 6554444 5557999998776543211 1112234677777766554222 3466666544
No 346
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=99.09 E-value=3.6e-11 Score=132.89 Aligned_cols=131 Identities=19% Similarity=0.210 Sum_probs=89.3
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCc-ch--HHHH-HH-HHCCcEEEEECCCCCC-CCC--hhhhh
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YS--KSLA-FL-SSVGYSLLIVNYRGSL-GFG--EEALQ 586 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~-~~--~~~~-~l-a~~G~~V~~~d~rG~~-~~g--~~~~~ 586 (771)
+.|.+.+ .+|.|+.....++.|+||++|||++...... +. .++. .+ ...|++|+.+|||... ++. .+...
T Consensus 94 sedcl~l--~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~ 171 (534)
T 1llf_A 94 SEDCLTI--NVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKA 171 (534)
T ss_dssp CSCCCEE--EEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHH
T ss_pred CCCCeEE--EEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccc
Confidence 3455444 5888975444567899999999987654432 21 1221 22 2468999999999632 111 11111
Q ss_pred cCCCCccccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHHhC--------CCceeEEEecCCc
Q 004149 587 SLPGKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQA--------PDKFVAAAARNPL 650 (771)
Q Consensus 587 ~~~~~~~~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~--------p~~~~a~v~~~p~ 650 (771)
.. .+...+.|+.++++|+.++ ...|++||.|+|+|+||.+++.++... +.+|+++|+.+|.
T Consensus 172 ~~---~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 172 EG---SGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp HT---CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred cC---CCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 11 2334589999999999885 236999999999999999888776653 4579999999984
No 347
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.08 E-value=1.9e-09 Score=116.71 Aligned_cols=266 Identities=15% Similarity=0.079 Sum_probs=151.5
Q ss_pred eeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCccccccc
Q 004149 71 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVY 150 (771)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 150 (771)
.+.+++|++.++ +..++... ......+...+|||||++||..+..+ .+.+|+-...+.+....... +
T Consensus 124 d~tV~lWd~~tg--~~~~~~~~--~~~~~~V~sv~fspdg~~lasgs~Dg-----~v~iWd~~~~~~~~~~~~h~-~--- 190 (420)
T 4gga_A 124 DNSVYLWSASSG--DILQLLQM--EQPGEYISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRNMTSHS-A--- 190 (420)
T ss_dssp TTEEEEEETTTC--CEEEEEEC--CSTTCCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECCCS-S---
T ss_pred CCEEEEEECCCC--CEEEEEEe--cCCCCcEEEEEECCCCCEEEEEECCC-----eEEEEEcCCCcEEEEEeCCC-C---
Confidence 346777776432 33332211 11124588999999999998876543 45666322222222221111 1
Q ss_pred CCCcccceeecCCCCeEEEEecCCCCCCCCccCCCC-CCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCc
Q 004149 151 ADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGST-KGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE 229 (771)
Q Consensus 151 ~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~ 229 (771)
...++++|++.|+..+.+.... .|+.... ........+........+.++......+.....+.+|+..+++
T Consensus 191 -----~v~~~s~~~~~l~sgs~d~~i~--~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~ 263 (420)
T 4gga_A 191 -----RVGSLSWNSYILSSGSRSGHIH--HHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 263 (420)
T ss_dssp -----CEEEEEEETTEEEEEETTSEEE--EEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCS
T ss_pred -----ceEEEeeCCCEEEEEeCCCcee--EeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecccc
Confidence 1334556777777766544321 1111000 0001111122222344466665555566667899999998765
Q ss_pred eeec---cCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCC
Q 004149 230 VQAV---KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED 306 (771)
Q Consensus 230 ~~~l---~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 306 (771)
.... ........+...+|+|++.. +++++.- ..+..|.++|+ .+
T Consensus 264 ~~~~~~~~~~~~~~~V~~~~~~p~~~~----~la~~~g------------s~D~~I~iwd~-----------------~t 310 (420)
T 4gga_A 264 GGWVPLQTFTQHQGAVKAVAWCPWQSN----VLATGGG------------TSDRHIRIWNV-----------------CS 310 (420)
T ss_dssp SCSCCSEEECCCSSCEEEEEECTTCTT----EEEEEEC------------TTTCEEEEEET-----------------TT
T ss_pred ccceeeeeecccCCceeeeeeCCCccc----EEEEEee------------cCCCEEEEEeC-----------------Cc
Confidence 3211 00234446778899999998 8776421 12347888898 66
Q ss_pred CcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCccc
Q 004149 307 LPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGL 386 (771)
Q Consensus 307 ~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~ 386 (771)
+...........+.+..|+|+++.|+..+... ...|++||+.+++......+
T Consensus 311 ~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~---------d~~I~iwd~~~~~~v~~l~g------------------- 362 (420)
T 4gga_A 311 GACLSAVDAHSQVCSILWSPHYKELISGHGFA---------QNQLVIWKYPTMAKVAELKG------------------- 362 (420)
T ss_dssp TEEEEEEECSSCEEEEEEETTTTEEEEEECTT---------TCCEEEEETTTCCEEEEECC-------------------
T ss_pred cccceeeccccceeeeeecCCCCeEEEEEecC---------CCEEEEEECCCCcEEEEEcC-------------------
Confidence 66544444555678899999999998876432 24699999887654211111
Q ss_pred ccCCCCCCccccCCCEEEEEeeeCCeeEEEEE
Q 004149 387 YSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 418 (771)
Q Consensus 387 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~ 418 (771)
+...+..++|||||+.| ++...++...||.+
T Consensus 363 H~~~V~~l~~spdg~~l-~S~s~D~tvriWdv 393 (420)
T 4gga_A 363 HTSRVLSLTMSPDGATV-ASAAADETLRLWRC 393 (420)
T ss_dssp CSSCEEEEEECTTSSCE-EEEETTTEEEEECC
T ss_pred CCCCEEEEEEcCCCCEE-EEEecCCeEEEEEC
Confidence 11235577899999865 56667777777754
No 348
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.08 E-value=3.1e-09 Score=121.02 Aligned_cols=241 Identities=10% Similarity=0.049 Sum_probs=146.6
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCC----cceEEEecCCcccccccCCCcccceeecC--CCCeEEEE
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQS----QLEKEFHVPQTVHGSVYADGWFEGISWNS--DETLIAYV 170 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~wSp--Dg~~la~~ 170 (771)
+.+...+|||||++||+..+ + ...+| ..+ +..+.+... .+. .+.+++||| ||+.|+..
T Consensus 19 ~~v~~~~~spdg~~l~~~~~---~---~v~v~~~~~~~~~~~~~~~~~~h---~~~-----~v~~~~~sp~~~~~~l~s~ 84 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPCG---K---SAFVRCLDDGDSKVPPVVQFTGH---GSS-----VVTTVKFSPIKGSQYLCSG 84 (615)
T ss_dssp TCCCCCEEETTTTEEEEEET---T---EEEEEECCSSCCSSCSEEEECTT---TTS-----CEEEEEECSSTTCCEEEEE
T ss_pred CceeEEEECCCCCEEEEecC---C---eEEEEECCCCCCccccceEEecC---CCc-----eEEEEEECcCCCCCEEEEe
Confidence 55788999999999999862 2 34444 333 333333211 111 026899999 99999886
Q ss_pred ecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCC--------ce-eeccCCCCCCc
Q 004149 171 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG--------EV-QAVKGIPKSLS 241 (771)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~--------~~-~~l~~~~~~~~ 241 (771)
+. ...|.+||+.++ +. ..+ ......
T Consensus 85 ~~--------------------------------------------dg~v~vw~~~~~~~~~~~~~~~~~~~--~~~~~~ 118 (615)
T 1pgu_A 85 DE--------------------------------------------SGKVIVWGWTFDKESNSVEVNVKSEF--QVLAGP 118 (615)
T ss_dssp ET--------------------------------------------TSEEEEEEEEEEGGGTEEEEEEEEEE--ECCSSC
T ss_pred cC--------------------------------------------CCEEEEEeCCCCcccccccccccchh--hccccc
Confidence 43 257899999655 22 222 234456
Q ss_pred cceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccc
Q 004149 242 VGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFF 321 (771)
Q Consensus 242 ~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~ 321 (771)
+..++|+|||+. |+..+...+ ....|+.+|. +.....+..+...+..
T Consensus 119 v~~~~~s~~~~~----l~~~~~~~~-----------~~~~v~~~d~------------------~~~~~~~~~~~~~v~~ 165 (615)
T 1pgu_A 119 ISDISWDFEGRR----LCVVGEGRD-----------NFGVFISWDS------------------GNSLGEVSGHSQRINA 165 (615)
T ss_dssp EEEEEECTTSSE----EEEEECCSS-----------CSEEEEETTT------------------CCEEEECCSCSSCEEE
T ss_pred EEEEEEeCCCCE----EEEeccCCC-----------CccEEEEEEC------------------CCcceeeecCCccEEE
Confidence 889999999998 887763211 1236777763 3445666677778899
Q ss_pred eeecCCCCE-EEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccC-
Q 004149 322 PRFSPDGKF-LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD- 399 (771)
Q Consensus 322 p~~SpDG~~-l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~d- 399 (771)
..|+|||+. |+..+.+ ..|.+||+.+++.... +....... ..+..++|+||
T Consensus 166 ~~~~~~~~~~l~~~~~d-----------~~v~vwd~~~~~~~~~----------~~~~~~~~------~~v~~~~~~~~~ 218 (615)
T 1pgu_A 166 CHLKQSRPMRSMTVGDD-----------GSVVFYQGPPFKFSAS----------DRTHHKQG------SFVRDVEFSPDS 218 (615)
T ss_dssp EEECSSSSCEEEEEETT-----------TEEEEEETTTBEEEEE----------ECSSSCTT------CCEEEEEECSTT
T ss_pred EEECCCCCcEEEEEeCC-----------CcEEEEeCCCcceeee----------ecccCCCC------ceEEEEEECCCC
Confidence 999999984 5444433 3588888766443111 10000000 02446789999
Q ss_pred CCEEEEEeeeCCeeEEEEEECCCCcEEEec-----CCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004149 400 GCTMLLSSIWGSSQVIISVNVSSGELLRIT-----PAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 400 g~~l~~~~~~~~~~~l~~~d~~tg~~~~l~-----~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~ 467 (771)
++.|+ +...++. |..+|+.+++..... .....+....|+ +++.++....+ ..+.+.++.+
T Consensus 219 ~~~l~-~~~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d----~~i~~wd~~~ 283 (615)
T 1pgu_A 219 GEFVI-TVGSDRK--ISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGAD----ATIRVWDVTT 283 (615)
T ss_dssp CCEEE-EEETTCC--EEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETT----SEEEEEETTT
T ss_pred CCEEE-EEeCCCe--EEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCC----CcEEEEECCC
Confidence 88654 4444444 555688888766554 333445556777 88777666533 3466666543
No 349
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=99.08 E-value=6.6e-11 Score=127.46 Aligned_cols=112 Identities=12% Similarity=0.020 Sum_probs=81.0
Q ss_pred CCCcEEEEEcCCCCCCCCCcchH-HHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCC
Q 004149 535 SCDPLIVVLHGGPHSVSLSSYSK-SLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 612 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~-~~~~la~-~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 612 (771)
...|+||++||.+... ...|.. .+..|++ .||.|+++|+||.+..... ... .......+|+.+.++++.++..
T Consensus 68 ~~~~~vvllHG~~~s~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~---~~~-~~~~~~~~dl~~~i~~l~~~~g 142 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSG-ENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYS---QAS-QNIRVVGAEVAYLVQVLSTSLN 142 (432)
T ss_dssp TTSEEEEEECCTTCCT-TSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCHH---HHH-HHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEECCCCCCC-CchHHHHHHHHHHhcCCcEEEEEECccccCccch---hhH-hhHHHHHHHHHHHHHHHHHhcC
Confidence 4568999999976553 235655 6677766 7999999999984332111 000 0011224678888888876544
Q ss_pred CCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCcc
Q 004149 613 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 613 ~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 651 (771)
++.+++.|+||||||.+|+.++.++|++++++++.+|..
T Consensus 143 ~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 143 YAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAE 181 (432)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEeCHHHHHHHHHHHhcccccceeEEecccc
Confidence 567899999999999999999999999999999888764
No 350
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.08 E-value=5.5e-09 Score=110.81 Aligned_cols=238 Identities=11% Similarity=0.103 Sum_probs=140.5
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCcc-ceeecCCccccccceEEEeCCC--CCeEEEEecCCCCCCe
Q 004149 49 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSV-TFQWAPFPVEMTGASAVVPSPS--GSKLLVVRNPENESPI 125 (771)
Q Consensus 49 ~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lt~~~~~~~~~~~~~~~~SPd--G~~la~~~~~~~~~~~ 125 (771)
.++||+.|+... ..+.+.+|++........ .+.. ....+...+|+|+ |+.|+.....+
T Consensus 19 ~s~~~~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~~~l~s~~~dg----- 79 (379)
T 3jrp_A 19 LDYYGKRLATCS---------SDKTIKIFEVEGETHKLIDTLTG-----HEGPVWRVDWAHPKFGTILASCSYDG----- 79 (379)
T ss_dssp ECSSSSEEEEEE---------TTSCEEEEEEETTEEEEEEEECC-----CSSCEEEEEECCGGGCSEEEEEETTS-----
T ss_pred EcCCCCEEEEEE---------CCCcEEEEecCCCcceeeeEecC-----CCCcEEEEEeCCCCCCCEEEEeccCC-----
Confidence 467888877653 224566666643222221 2211 2256888999988 88888765533
Q ss_pred EEEEe--cCCcceEEEecCCcccccccCCCcccceeecCC--CCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCc
Q 004149 126 QFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQ 201 (771)
Q Consensus 126 ~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpD--g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (771)
.+.+| ..++...+..... ..+ .+.++.|+|+ |+.|+..+.
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~-~~~------~v~~~~~~~~~~~~~l~~~~~----------------------------- 123 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAV-HSA------SVNSVQWAPHEYGPLLLVASS----------------------------- 123 (379)
T ss_dssp CEEEEEEETTEEEEEEEECC-CSS------CEEEEEECCGGGCSEEEEEET-----------------------------
T ss_pred EEEEEEcCCCceeEeeeecC-CCc------ceEEEEeCCCCCCCEEEEecC-----------------------------
Confidence 34444 2333222222211 111 2368999999 888888643
Q ss_pred ccccCCcCcccCCccCceEEEEEccCCce---eeccCCCCCCccceEEEec-------------CCCCCccEEEEEeecC
Q 004149 202 GDWEEDWGETYAGKRQPSLFVININSGEV---QAVKGIPKSLSVGQVVWAP-------------LNEGLHQYLVFVGWSS 265 (771)
Q Consensus 202 ~~~~~d~g~~~~~~~~~~l~v~d~~~~~~---~~l~~~~~~~~~~~~~wsp-------------Dg~~~~~~l~~~~~~~ 265 (771)
...|.+||+.++.. ..+ ......+..+.|+| |++. |+..+
T Consensus 124 ---------------d~~i~v~d~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~--- 179 (379)
T 3jrp_A 124 ---------------DGKVSVVEFKENGTTSPIII--DAHAIGVNSASWAPATIEEDGEHNGTKESRK----FVTGG--- 179 (379)
T ss_dssp ---------------TSEEEEEECCTTSCCCEEEE--ECCTTCEEEEEECCCC----------CTTCE----EEEEE---
T ss_pred ---------------CCcEEEEecCCCCceeeEEe--cCCCCceEEEEEcCccccccccccCCCCCCE----EEEEe---
Confidence 25789999887632 223 23445678899999 5775 66554
Q ss_pred cceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-----ceecCCCCccccceeecCC---CCEEEEEecC
Q 004149 266 ETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-----VVNLTESISSAFFPRFSPD---GKFLVFLSAK 337 (771)
Q Consensus 266 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~lt~~~~~~~~p~~SpD---G~~l~f~~~~ 337 (771)
.+..|+++|+ .++. ...+..+...+..+.|+|| |+.|+..+.+
T Consensus 180 ------------~dg~i~i~d~-----------------~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d 230 (379)
T 3jrp_A 180 ------------ADNLVKIWKY-----------------NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD 230 (379)
T ss_dssp ------------TTSCEEEEEE-----------------ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred ------------CCCeEEEEEe-----------------cCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCC
Confidence 2236777776 2222 2345556677889999999 7887776655
Q ss_pred CCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEE
Q 004149 338 SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 417 (771)
Q Consensus 338 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~ 417 (771)
. .|.+||+.++..... ..+... .. +...+..++|+|||+.|+.. ..++...+|.
T Consensus 231 g-----------~i~iwd~~~~~~~~~-------~~~~~~---~~----~~~~v~~~~~s~~g~~l~~~-~~dg~i~iw~ 284 (379)
T 3jrp_A 231 R-----------TCIIWTQDNEQGPWK-------KTLLKE---EK----FPDVLWRASWSLSGNVLALS-GGDNKVTLWK 284 (379)
T ss_dssp S-----------CEEEEEESSTTSCCE-------EEESSS---SC----CSSCEEEEEECSSSCCEEEE-ESSSSEEEEE
T ss_pred C-----------EEEEEeCCCCCccce-------eeeecc---cc----CCCcEEEEEEcCCCCEEEEe-cCCCcEEEEe
Confidence 3 488888877542110 000000 00 01134567899999966544 4577788887
Q ss_pred EEC
Q 004149 418 VNV 420 (771)
Q Consensus 418 ~d~ 420 (771)
++.
T Consensus 285 ~~~ 287 (379)
T 3jrp_A 285 ENL 287 (379)
T ss_dssp EEE
T ss_pred CCC
Confidence 774
No 351
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.07 E-value=1.3e-07 Score=101.35 Aligned_cols=259 Identities=13% Similarity=0.075 Sum_probs=142.6
Q ss_pred ccceEEEeCC-CCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCC---CeEEEEec
Q 004149 99 TGASAVVPSP-SGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDE---TLIAYVAE 172 (771)
Q Consensus 99 ~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg---~~la~~~~ 172 (771)
..+...+|+| +++.++.....+ .+.+| ..++........... ..+.|+|++ ..|+...
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~- 163 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDK-----TLKVWDTNTLQTADVFNFEETV----------YSHHMSPVSTKHCLVAVGT- 163 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTS-----EEEEEETTTTEEEEEEECSSCE----------EEEEECSSCSSCCEEEEEE-
T ss_pred CcEEEEEEccCCCcEEEEEeCCC-----eEEEeeCCCCccceeccCCCce----------eeeEeecCCCCCcEEEEEc-
Confidence 5688999999 666776654433 45566 344444444433333 477788854 4666643
Q ss_pred CCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCC
Q 004149 173 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 252 (771)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~ 252 (771)
....|.+||+.+++..... ......+..+.|+|+++
T Consensus 164 -------------------------------------------~~~~v~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~ 199 (408)
T 4a11_B 164 -------------------------------------------RGPKVQLCDLKSGSCSHIL-QGHRQEILAVSWSPRYD 199 (408)
T ss_dssp -------------------------------------------SSSSEEEEESSSSCCCEEE-CCCCSCEEEEEECSSCT
T ss_pred -------------------------------------------CCCeEEEEeCCCcceeeee-cCCCCcEEEEEECCCCC
Confidence 2357899999887654431 33455688999999999
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEE
Q 004149 253 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLV 332 (771)
Q Consensus 253 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~ 332 (771)
. +++++. .+..|.++|+......-..+..............+..+...+....|+|||+.|+
T Consensus 200 ~----ll~~~~--------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 261 (408)
T 4a11_B 200 Y----ILATAS--------------ADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLL 261 (408)
T ss_dssp T----EEEEEE--------------TTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEE
T ss_pred c----EEEEEc--------------CCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEE
Confidence 8 777663 2236777776210000000000000000000111134455688899999999998
Q ss_pred EEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccc-cCCCEEEEEeeeCC
Q 004149 333 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL-SDGCTMLLSSIWGS 411 (771)
Q Consensus 333 f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s-~dg~~l~~~~~~~~ 411 (771)
..+.+. .|.+||+.+++.......... .... ......+. ..+..+++. ..++
T Consensus 262 ~~~~dg-----------~i~vwd~~~~~~~~~~~~~~~---------~~~~------~~~~~~~~~~~~~~~~~~-~~~~ 314 (408)
T 4a11_B 262 TVGTDN-----------RMRLWNSSNGENTLVNYGKVC---------NNSK------KGLKFTVSCGCSSEFVFV-PYGS 314 (408)
T ss_dssp EEETTS-----------CEEEEETTTCCBCCCCCCCCC---------CCCS------SCCCCEECCSSSSCEEEE-EETT
T ss_pred EecCCC-----------eEEEEECCCCccceecccccc---------cccc------ccceeEEecCCCceEEEE-ecCC
Confidence 777653 489999987765332211100 0000 00111222 223334444 3344
Q ss_pred eeEEEEEECCCCcEEEecC-CCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 412 SQVIISVNVSSGELLRITP-AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 412 ~~~l~~~d~~tg~~~~l~~-~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
.+..+|+.+++...... ....+....|+++++.|+....+ ..|.+.++...
T Consensus 315 --~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~i~iw~~~~~ 366 (408)
T 4a11_B 315 --TIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRD----CNILAWVPSLY 366 (408)
T ss_dssp --EEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETT----SCEEEEEECC-
T ss_pred --EEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCC----CeEEEEeCCCC
Confidence 46666888887665544 33455667899999887755432 24666666543
No 352
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.07 E-value=2.2e-08 Score=103.12 Aligned_cols=251 Identities=10% Similarity=0.022 Sum_probs=144.0
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCC
Q 004149 101 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 180 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 180 (771)
...|+|+|||+.|+|+.... ..++.+..++....+....... .++.|+|||+.++.. .
T Consensus 47 ~egp~~~~~g~~l~~~d~~~---~~i~~~~~~g~~~~~~~~~~~~----------~gl~~d~dG~l~v~~--~------- 104 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVG---RRVLGWREDGTVDVLLDATAFT----------NGNAVDAQQRLVHCE--H------- 104 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTT---TEEEEEETTSCEEEEEESCSCE----------EEEEECTTSCEEEEE--T-------
T ss_pred ccCCeEeCCCCEEEEEECCC---CEEEEEeCCCCEEEEeCCCCcc----------ceeeECCCCCEEEEE--C-------
Confidence 45799999999998875433 3466666544443333322222 588999999844332 1
Q ss_pred ccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCC---CCccceEEEecCCCCCccE
Q 004149 181 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK---SLSVGQVVWAPLNEGLHQY 257 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~---~~~~~~~~wspDg~~~~~~ 257 (771)
....|++++.+ |+.+.+..... ...+..++++|||+
T Consensus 105 -----------------------------------~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~----- 143 (305)
T 3dr2_A 105 -----------------------------------GRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGA----- 143 (305)
T ss_dssp -----------------------------------TTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSC-----
T ss_pred -----------------------------------CCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCC-----
Confidence 12467777776 55555421111 12356789999997
Q ss_pred EEEEeecCcc--eeeeeee-eccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEE
Q 004149 258 LVFVGWSSET--RKLGIKY-CYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFL 334 (771)
Q Consensus 258 l~~~~~~~~~--~~~g~~~-~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~ 334 (771)
|+|+....+. ...+... .......||++|. ++++.+.+. .......++|||||+.|++.
T Consensus 144 l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~-----------------~~g~~~~~~-~~~~p~gl~~spdg~~lyv~ 205 (305)
T 3dr2_A 144 IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP-----------------DGSPLQRMA-DLDHPNGLAFSPDEQTLYVS 205 (305)
T ss_dssp EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS-----------------SSCCCEEEE-EESSEEEEEECTTSSEEEEE
T ss_pred EEEeCcCCCccccccccccccccCCCeEEEEcC-----------------CCCcEEEEe-cCCCCcceEEcCCCCEEEEE
Confidence 7775210000 0000000 0012347999997 677777665 44445678999999998877
Q ss_pred ecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeE
Q 004149 335 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 414 (771)
Q Consensus 335 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 414 (771)
..... ......|+++++.+++ +.. ....... .. .....+++.++|+ |+++. . ..
T Consensus 206 ~~~~~-----~~~~~~i~~~~~~~~~---l~~-~~~~~~~-----~~-------~~pdgi~~d~~G~-lwv~~-~---~g 259 (305)
T 3dr2_A 206 QTPEQ-----GHGSVEITAFAWRDGA---LHD-RRHFASV-----PD-------GLPDGFCVDRGGW-LWSSS-G---TG 259 (305)
T ss_dssp ECCC--------CCCEEEEEEEETTE---EEE-EEEEECC-----SS-------SCCCSEEECTTSC-EEECC-S---SE
T ss_pred ecCCc-----CCCCCEEEEEEecCCC---ccC-CeEEEEC-----CC-------CCCCeEEECCCCC-EEEec-C---Cc
Confidence 65420 0112569999987644 111 1111110 00 1234677889998 65544 2 24
Q ss_pred EEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEE
Q 004149 415 IISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGY 464 (771)
Q Consensus 415 l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~ 464 (771)
|++++.++..+..+.... ......|+++++.|+++.+. .||.++
T Consensus 260 v~~~~~~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~-----~l~~~~ 303 (305)
T 3dr2_A 260 VCVFDSDGQLLGHIPTPG-TASNCTFDQAQQRLFITGGP-----CLWMLP 303 (305)
T ss_dssp EEEECTTSCEEEEEECSS-CCCEEEECTTSCEEEEEETT-----EEEEEE
T ss_pred EEEECCCCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCC-----eEEEEE
Confidence 888998666566665444 34557788888888877653 566654
No 353
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.06 E-value=1e-07 Score=100.66 Aligned_cols=122 Identities=8% Similarity=-0.015 Sum_probs=72.5
Q ss_pred ceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccc--cCCCCCcccccCCCCCCcccc
Q 004149 321 FPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQC--AEGDCFPGLYSSSILSNPWLS 398 (771)
Q Consensus 321 ~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~f~g~~~~~~~~~~~s~ 398 (771)
...++|||+.++|.+.. ..++++|+.++....+. ...+... ......| .....++++|
T Consensus 204 ~~~~~~~g~~~~~~~~~-----------~~v~v~d~~~~~~~~~~-----~~~~~~~~~~~~~~~p----~g~~~~a~~~ 263 (361)
T 2oiz_A 204 FIAPALDKDKAHFVSYY-----------GNVYSADFSGDEVKVDG-----PWSLLNDEDKAKNWVP----GGYNLVGLHR 263 (361)
T ss_dssp CSCCEECSSEEEEEBTT-----------SEEEEEECSSSSCEEEE-----EEESCCHHHHHTTCEE----CCSSCEEEET
T ss_pred EEEecccCCEEEEEeCC-----------CeEEEEEecCCCceecc-----cccccCcccccccccc----CCeeEEEEec
Confidence 34558999998887743 25899998765432110 0000000 0000001 1223467899
Q ss_pred CCCEEEEEeeeC--------CeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 399 DGCTMLLSSIWG--------SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 399 dg~~l~~~~~~~--------~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
|++++|+..... ....++.||++++++..-..... .....+++||+.|+.+. . ..|.+++..++
T Consensus 264 dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n-~----~~v~v~D~~t~ 335 (361)
T 2oiz_A 264 ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLD-G----GNVNVYDISQP 335 (361)
T ss_dssp TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEEC-S----SCEEEEECSSS
T ss_pred CCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeC-C----CeEEEEECCCC
Confidence 999888765411 23579999999988665433333 56679999999766433 2 66888876544
No 354
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.05 E-value=7e-09 Score=106.78 Aligned_cols=271 Identities=14% Similarity=0.101 Sum_probs=155.0
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
+.+...+| |+|++|+.....+ .+.+| ..+........... .+..+.|+|||+.|+..+.+...
T Consensus 19 ~~v~~~~~-~~~~~l~s~~~dg-----~v~vw~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~~dg~i 83 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVASVSRDG-----TVRLWSKDDQWLGTVVYTGQG---------FLNSVCYDSEKELLLFGGKDTMI 83 (313)
T ss_dssp SCEEEEEE-EETTEEEEEETTS-----EEEEEEESSSEEEEEEEECSS---------CEEEEEEETTTTEEEEEETTSCE
T ss_pred CCcEEEEe-cCCCEEEEEEcCC-----cEEEEECCCCEEEEEeecCCc---------cEEEEEECCCCCEEEEecCCCeE
Confidence 45778899 9999988765543 45566 23333333332111 22689999999999988766542
Q ss_pred CCCCccCCCCCC---CCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEec-CCC
Q 004149 177 SKPTFSLGSTKG---GSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP-LNE 252 (771)
Q Consensus 177 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wsp-Dg~ 252 (771)
. .|....... ......+......+.| +....+++.....|.+|| .......+ ......+..+.|+| +++
T Consensus 84 ~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d-~~~~~~~~--~~~~~~v~~~~~~~~~~~ 156 (313)
T 3odt_A 84 N--GVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK-EGSLVYNL--QAHNASVWDAKVVSFSEN 156 (313)
T ss_dssp E--EEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE-TTEEEEEE--ECCSSCEEEEEEEETTTT
T ss_pred E--EEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc-CCcEEEec--ccCCCceeEEEEccCCCC
Confidence 2 122111111 1111122222233344 333455666678999999 33333444 33455677889988 777
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCC-CCccccceeecCCCCEE
Q 004149 253 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFL 331 (771)
Q Consensus 253 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~~~~~~p~~SpDG~~l 331 (771)
. |+..+ ....|.++|. ......+.. ....+....|+|+|+ |
T Consensus 157 ~----l~~~~---------------~d~~i~i~d~------------------~~~~~~~~~~~~~~i~~~~~~~~~~-~ 198 (313)
T 3odt_A 157 K----FLTAS---------------ADKTIKLWQN------------------DKVIKTFSGIHNDVVRHLAVVDDGH-F 198 (313)
T ss_dssp E----EEEEE---------------TTSCEEEEET------------------TEEEEEECSSCSSCEEEEEEEETTE-E
T ss_pred E----EEEEE---------------CCCCEEEEec------------------CceEEEEeccCcccEEEEEEcCCCe-E
Confidence 5 66554 2336777774 223333443 566788999999999 6
Q ss_pred EEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCC
Q 004149 332 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 411 (771)
Q Consensus 332 ~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~ 411 (771)
+..+.+ ..|.+||+.+++..... .. ....+..++|+||++ | ++...++
T Consensus 199 ~~~~~d-----------g~i~i~d~~~~~~~~~~----------~~---------~~~~i~~~~~~~~~~-l-~~~~~dg 246 (313)
T 3odt_A 199 ISCSND-----------GLIKLVDMHTGDVLRTY----------EG---------HESFVYCIKLLPNGD-I-VSCGEDR 246 (313)
T ss_dssp EEEETT-----------SEEEEEETTTCCEEEEE----------EC---------CSSCEEEEEECTTSC-E-EEEETTS
T ss_pred EEccCC-----------CeEEEEECCchhhhhhh----------hc---------CCceEEEEEEecCCC-E-EEEecCC
Confidence 555543 35899998776532111 00 011345678999994 4 3444444
Q ss_pred eeEEEEEECCCCcEEEec-CCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 412 SQVIISVNVSSGELLRIT-PAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 412 ~~~l~~~d~~tg~~~~l~-~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
. |..+|+.+++..... .....+....|+++++ ++. .+. -..+.+.++.++
T Consensus 247 ~--v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~-~~~---dg~i~iw~~~~~ 297 (313)
T 3odt_A 247 T--VRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIV-GSS---DNLVRIFSQEKS 297 (313)
T ss_dssp E--EEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEE-EET---TSCEEEEESCGG
T ss_pred E--EEEEECCCCceeEEEeccCceEEEEEEccCCC-EEE-EeC---CCcEEEEeCCCC
Confidence 4 555688788765443 3333456678888888 333 222 234677666544
No 355
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.05 E-value=9.5e-09 Score=105.40 Aligned_cols=242 Identities=11% Similarity=0.106 Sum_probs=138.1
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCc-cceeecCCccccccceEEEeCCC--CCeEEEEecCCCCCCeE
Q 004149 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENS-VTFQWAPFPVEMTGASAVVPSPS--GSKLLVVRNPENESPIQ 126 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~SPd--G~~la~~~~~~~~~~~~ 126 (771)
++||++|+-.. ..+.+.++++.....+. ..+.. ..+.+...+|+|+ |+.||..+... .
T Consensus 18 s~~g~~las~s---------~D~~v~iw~~~~~~~~~~~~l~g-----H~~~V~~v~~s~~~~g~~l~s~s~D~-----~ 78 (297)
T 2pm7_B 18 DYYGKRMATCS---------SDKTIKIFEVEGETHKLIDTLTG-----HEGPVWRVDWAHPKFGTILASCSYDG-----K 78 (297)
T ss_dssp CTTSSEEEEEE---------TTSCEEEEEBCSSCBCCCEEECC-----CSSCEEEEEECCGGGCSEEEEEETTT-----E
T ss_pred CCCCCEEEEEe---------CCCEEEEEecCCCCcEEEEEEcc-----ccCCeEEEEecCCCcCCEEEEEcCCC-----E
Confidence 56888777543 33566676664332121 22221 2256888999874 88888776544 5
Q ss_pred EEEec--CCcceEEEecCCcccccccCCCcccceeecCC--CCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcc
Q 004149 127 FELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQG 202 (771)
Q Consensus 127 ~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpD--g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (771)
+.+|+ .+....+..... .. ..+.+++|+|| |+.|+..+.
T Consensus 79 v~iWd~~~~~~~~~~~~~~-h~------~~v~~v~~~p~~~g~~l~s~s~------------------------------ 121 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVHAV-HS------ASVNSVQWAPHEYGPMLLVASS------------------------------ 121 (297)
T ss_dssp EEEEEBSSSCBCCCEEECC-CS------SCEEEEEECCGGGCSEEEEEET------------------------------
T ss_pred EEEEEcCCCceEEEEEeec-CC------CceeEEEeCcCCCCcEEEEEEC------------------------------
Confidence 66662 222122211111 11 12368999998 888877543
Q ss_pred cccCCcCcccCCccCceEEEEEccCCc---eeeccCCCCCCccceEEEecCC-------------CCCccEEEEEeecCc
Q 004149 203 DWEEDWGETYAGKRQPSLFVININSGE---VQAVKGIPKSLSVGQVVWAPLN-------------EGLHQYLVFVGWSSE 266 (771)
Q Consensus 203 ~~~~d~g~~~~~~~~~~l~v~d~~~~~---~~~l~~~~~~~~~~~~~wspDg-------------~~~~~~l~~~~~~~~ 266 (771)
...|.+||+.++. ...+ ......+..+.|+|++ +. |+..+
T Consensus 122 --------------d~~v~~wd~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~----l~sgs---- 177 (297)
T 2pm7_B 122 --------------DGKVSVVEFKENGTTSPIII--DAHAIGVNSASWAPATIEEDGEHNGTKESRK----FVTGG---- 177 (297)
T ss_dssp --------------TSEEEEEEBCSSSCBCCEEE--ECCSSCEEEEEECCCC------------CCE----EEEEE----
T ss_pred --------------CCcEEEEEecCCCceeeeee--ecccCccceEeecCCcccccccCCCCCCcce----EEEEc----
Confidence 2578889987653 2223 2334467788999984 33 44443
Q ss_pred ceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-----ceecCCCCccccceeecCCC---CEEEEEecCC
Q 004149 267 TRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-----VVNLTESISSAFFPRFSPDG---KFLVFLSAKS 338 (771)
Q Consensus 267 ~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~lt~~~~~~~~p~~SpDG---~~l~f~~~~~ 338 (771)
.+..|.++|+ .++. ...+..+...+...+||||+ ++|+..+.+.
T Consensus 178 -----------~D~~v~lwd~-----------------~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~ 229 (297)
T 2pm7_B 178 -----------ADNLVKIWKY-----------------NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDR 229 (297)
T ss_dssp -----------TTSCEEEEEE-----------------ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred -----------CCCcEEEEEE-----------------cCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCC
Confidence 2235666665 2222 23566677779999999996 6777666553
Q ss_pred CCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEE
Q 004149 339 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 418 (771)
Q Consensus 339 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~ 418 (771)
.|.+||+.++..... ..+.. ...++ ..+..++|+|||+.| ++...++...||..
T Consensus 230 -----------~v~iWd~~~~~~~~~-------~~~~~---~~~~~----~~v~~~~~s~~g~~l-as~~~D~~v~lw~~ 283 (297)
T 2pm7_B 230 -----------TCIIWTQDNEQGPWK-------KTLLK---EEKFP----DVLWRASWSLSGNVL-ALSGGDNKVTLWKE 283 (297)
T ss_dssp -----------CEEEEEESSTTSCCE-------EEESS---SSCCS----SCEEEEEECSSSCCE-EEEETTSCEEEEEE
T ss_pred -----------cEEEEEeCCCCCccc-------eeeee---cccCC----CcEEEEEECCCCCEE-EEEcCCCcEEEEEE
Confidence 477888765331100 00000 00111 134567899999866 45566778889887
Q ss_pred ECCCCcEE
Q 004149 419 NVSSGELL 426 (771)
Q Consensus 419 d~~tg~~~ 426 (771)
+.. |...
T Consensus 284 ~~~-g~w~ 290 (297)
T 2pm7_B 284 NLE-GKWE 290 (297)
T ss_dssp CTT-SCEE
T ss_pred CCC-CcEE
Confidence 653 4443
No 356
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.05 E-value=8.6e-09 Score=106.81 Aligned_cols=233 Identities=9% Similarity=0.056 Sum_probs=131.4
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecC--CCCeEEEEecCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNS--DETLIAYVAEEP 174 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSp--Dg~~la~~~~~~ 174 (771)
..+...+|||||++||..+... ...+|+ .+....+..+. +..+. +..++|+| +|+.|+..+.+
T Consensus 14 ~~V~~v~~s~~g~~lasgs~D~-----~v~lwd~~~~~~~~~~~l~-gH~~~------V~~v~~~~~~~~~~l~s~s~D- 80 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCSSDR-----SVKIFDVRNGGQILIADLR-GHEGP------VWQVAWAHPMYGNILASCSYD- 80 (316)
T ss_dssp CCEEEEEECGGGCEEEEEETTT-----EEEEEEEETTEEEEEEEEE-CCSSC------EEEEEECCGGGSSCEEEEETT-
T ss_pred CeEEEeeEcCCCCEEEEEeCCC-----eEEEEEecCCCcEEEEEEc-CCCcc------EEEEEeCCCCCCCEEEEEECC-
Confidence 4578899999999998776543 455552 22222222221 11122 26899987 48888876533
Q ss_pred CCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce---eeccCCCCCCccceEEEecC-
Q 004149 175 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV---QAVKGIPKSLSVGQVVWAPL- 250 (771)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~---~~l~~~~~~~~~~~~~wspD- 250 (771)
..|.+||+.+++. ..+ ......+..++|+||
T Consensus 81 -------------------------------------------~~v~iWd~~~~~~~~~~~~--~~h~~~V~~v~~~p~~ 115 (316)
T 3bg1_A 81 -------------------------------------------RKVIIWREENGTWEKSHEH--AGHDSSVNSVCWAPHD 115 (316)
T ss_dssp -------------------------------------------SCEEEECCSSSCCCEEEEE--CCCSSCCCEEEECCTT
T ss_pred -------------------------------------------CEEEEEECCCCcceEEEEc--cCCCCceEEEEECCCC
Confidence 5688899887642 223 234456889999998
Q ss_pred -CCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC-c---ceecCCCCccccceeec
Q 004149 251 -NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-P---VVNLTESISSAFFPRFS 325 (771)
Q Consensus 251 -g~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~---~~~lt~~~~~~~~p~~S 325 (771)
|+. |+..+ .+..|.++|+ .++ . ...+..+...+....|+
T Consensus 116 ~g~~----lasgs---------------~D~~i~lwd~-----------------~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (316)
T 3bg1_A 116 YGLI----LACGS---------------SDGAISLLTY-----------------TGEGQWEVKKINNAHTIGCNAVSWA 159 (316)
T ss_dssp TCSC----EEEEC---------------SSSCEEEEEE-----------------CSSSCEEECCBTTSSSSCBCCCEEC
T ss_pred CCcE----EEEEc---------------CCCCEEEEec-----------------CCCCCcceeeeeccccCCcceEEEc
Confidence 665 66554 2235677776 322 1 12233445567788999
Q ss_pred CCC-----------------CEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCccccc
Q 004149 326 PDG-----------------KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYS 388 (771)
Q Consensus 326 pDG-----------------~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~ 388 (771)
|++ +.|+..+.+ ..|.+||+.+++... .... +.+ +.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~l~sgs~D-----------~~v~lWd~~~~~~~~-------~~~~--------l~~-h~ 212 (316)
T 3bg1_A 160 PAVVPGSLIDHPSGQKPNYIKRFASGGCD-----------NLIKLWKEEEDGQWK-------EEQK--------LEA-HS 212 (316)
T ss_dssp CCCCC------CCSCCCCCCCBEECCBTT-----------SBCCEEEECTTSCEE-------EEEC--------CBC-CS
T ss_pred cccCCccccccccccCccccceEEEecCC-----------CeEEEEEeCCCCccc-------eeee--------ccc-CC
Confidence 983 444433322 357777775432100 0000 010 11
Q ss_pred CCCCCCccccCC---CEEEEEeeeCCeeEEEEEECCC-Cc--EEEecCCCCCceeeEEeecCCEEEEEEe
Q 004149 389 SSILSNPWLSDG---CTMLLSSIWGSSQVIISVNVSS-GE--LLRITPAESNFSWSLLTLDGDNIIAVSS 452 (771)
Q Consensus 389 ~~~~~~~~s~dg---~~l~~~~~~~~~~~l~~~d~~t-g~--~~~l~~~~~~~~~~~~s~d~~~l~~~~s 452 (771)
..+..++|+|++ ..++++...++...||.++... ++ .+.+......+....|+|+++.|+....
T Consensus 213 ~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~ 282 (316)
T 3bg1_A 213 DWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGG 282 (316)
T ss_dssp SCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEES
T ss_pred CceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcC
Confidence 134567899987 2356777777777777543211 11 1222222334556788999887765553
No 357
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.04 E-value=1.2e-08 Score=110.70 Aligned_cols=180 Identities=16% Similarity=0.101 Sum_probs=108.3
Q ss_pred ceEEEEEccCCce--------eeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEeccc
Q 004149 218 PSLFVININSGEV--------QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSL 289 (771)
Q Consensus 218 ~~l~v~d~~~~~~--------~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 289 (771)
..|.+||+.++.. ..+ ......+..++|+|++.. +++++. ....|+++|+
T Consensus 204 g~i~vwd~~~~~~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~----~l~s~~--------------~dg~i~i~d~-- 261 (430)
T 2xyi_A 204 HTICLWDINATPKEHRVIDAKNIF--TGHTAVVEDVAWHLLHES----LFGSVA--------------DDQKLMIWDT-- 261 (430)
T ss_dssp SCEEEEETTSCCBGGGEEECSEEE--CCCSSCEEEEEECSSCTT----EEEEEE--------------TTSEEEEEET--
T ss_pred CeEEEEeCCCCCCCCceeccceee--cCCCCCEeeeEEeCCCCC----EEEEEe--------------CCCeEEEEEC--
Confidence 5788999877321 222 234456888999997766 666542 3347888998
Q ss_pred ccchhhhhhhhcCCCCCC----cceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCc
Q 004149 290 YKSEASELELKESSSEDL----PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSL 365 (771)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~----~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~ 365 (771)
..+ ....+..+...+....|+|+|+.++.....+ ..|.+||+.+......+
T Consensus 262 ---------------~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d----------g~v~vwd~~~~~~~~~~ 316 (430)
T 2xyi_A 262 ---------------RNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD----------KTVALWDLRNLKLKLHS 316 (430)
T ss_dssp ---------------TCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT----------SEEEEEETTCTTSCSEE
T ss_pred ---------------CCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC----------CeEEEEeCCCCCCCeEE
Confidence 332 3344445666788999999999765555432 35889998764321100
Q ss_pred cceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCC------------CcEEEecCC-C
Q 004149 366 EKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSS------------GELLRITPA-E 432 (771)
Q Consensus 366 ~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~t------------g~~~~l~~~-~ 432 (771)
+.. ....+..++|+|+++.++++...++...||.++..+ .++...... .
T Consensus 317 ---------~~~---------h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 378 (430)
T 2xyi_A 317 ---------FES---------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT 378 (430)
T ss_dssp ---------EEC---------CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCS
T ss_pred ---------eec---------CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCC
Confidence 000 011345778999998888888777777777543311 133333322 2
Q ss_pred CCceeeEEeecCCEEEEEEeCCCCCCeEEEEEe
Q 004149 433 SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 465 (771)
Q Consensus 433 ~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~ 465 (771)
..+....|++++.+++++.+.- ..|.+.++
T Consensus 379 ~~v~~~~~~p~~~~~l~s~s~d---g~i~iw~~ 408 (430)
T 2xyi_A 379 AKISDFSWNPNEPWIICSVSED---NIMQVWQM 408 (430)
T ss_dssp SCEEEEEECSSSTTEEEEEETT---SEEEEEEE
T ss_pred CCceEEEECCCCCCEEEEEECC---CCEEEeEc
Confidence 3456678888888555555432 33555444
No 358
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=99.04 E-value=4e-10 Score=123.64 Aligned_cols=134 Identities=19% Similarity=0.192 Sum_probs=92.1
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCc-chHHHHHHHHCC-cEEEEECCCC-CCCCChhhhhc--CC
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YSKSLAFLSSVG-YSLLIVNYRG-SLGFGEEALQS--LP 589 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~-~~~~~~~la~~G-~~V~~~d~rG-~~~~g~~~~~~--~~ 589 (771)
+.|++.+ .+|.|+. ..++.|+||++|||++...... .......|+++| ++|+.+|||. .-|++...... ..
T Consensus 81 ~edcl~l--~v~~P~~--~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~ 156 (498)
T 2ogt_A 81 SEDGLYL--NIWSPAA--DGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAY 156 (498)
T ss_dssp BSCCCEE--EEEESCS--SSCCEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGG
T ss_pred CCCCcEE--EEEecCC--CCCCCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhccccc
Confidence 4456555 4667862 4567899999999986543322 222345677666 9999999993 11233221100 01
Q ss_pred CCccccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHHhC--CCceeEEEecCCccc
Q 004149 590 GKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCN 652 (771)
Q Consensus 590 ~~~~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~p~~~ 652 (771)
...+...+.|+.++++|+.++. ..|++||.|+|+|+||.+++.++... ..+|+++|+.+|...
T Consensus 157 ~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 157 AQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp TTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred cCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 1223345889999999998862 36899999999999999999888753 467999999998764
No 359
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.03 E-value=5.1e-08 Score=101.66 Aligned_cols=258 Identities=15% Similarity=0.110 Sum_probs=147.2
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEec-CCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004149 101 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
...++|+|||+ |+++... ...++.++ .+++.+.+... ...+ .++.|+|||+.++......
T Consensus 47 ~~~~~~~~~g~-l~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~----------~~i~~~~dg~l~v~~~~~~---- 108 (333)
T 2dg1_A 47 LEGLNFDRQGQ-LFLLDVF---EGNIFKINPETKEIKRPFVSHKANP----------AAIKIHKDGRLFVCYLGDF---- 108 (333)
T ss_dssp EEEEEECTTSC-EEEEETT---TCEEEEECTTTCCEEEEEECSSSSE----------EEEEECTTSCEEEEECTTS----
T ss_pred ccCcEECCCCC-EEEEECC---CCEEEEEeCCCCcEEEEeeCCCCCc----------ceEEECCCCcEEEEeCCCC----
Confidence 46799999998 5444332 23577776 45555554422 2222 5899999997444321110
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeec-cCCCCCCccceEEEecCCCCCccE
Q 004149 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV-KGIPKSLSVGQVVWAPLNEGLHQY 257 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l-~~~~~~~~~~~~~wspDg~~~~~~ 257 (771)
.....|+++|.++++.+.+ ........+..+.++|||+
T Consensus 109 ------------------------------------~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~----- 147 (333)
T 2dg1_A 109 ------------------------------------KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG----- 147 (333)
T ss_dssp ------------------------------------SSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC-----
T ss_pred ------------------------------------CCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC-----
Confidence 0125799999998887643 1111223567889999986
Q ss_pred EEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecC
Q 004149 258 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 337 (771)
Q Consensus 258 l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~ 337 (771)
+++....... ......||+++. ++++.+.+.........+.|+|||+.|++....
T Consensus 148 l~v~~~~~~~--------~~~~~~l~~~~~-----------------~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~ 202 (333)
T 2dg1_A 148 FYFTDFRGYS--------TNPLGGVYYVSP-----------------DFRTVTPIIQNISVANGIALSTDEKVLWVTETT 202 (333)
T ss_dssp EEEEECCCBT--------TBCCEEEEEECT-----------------TSCCEEEEEEEESSEEEEEECTTSSEEEEEEGG
T ss_pred EEEEeccccc--------cCCCceEEEEeC-----------------CCCEEEEeecCCCcccceEECCCCCEEEEEeCC
Confidence 6665522100 012347999987 566666554433346678999999988776543
Q ss_pred CCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEE
Q 004149 338 SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 417 (771)
Q Consensus 338 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~ 417 (771)
...|+++|+.+.+............. +++. ..+..+++++||+ |+++.... ..|++
T Consensus 203 ----------~~~i~~~d~~~~g~~~~~~~~~~~~~---------~~~~--~~~~~i~~d~~G~-l~v~~~~~--~~v~~ 258 (333)
T 2dg1_A 203 ----------ANRLHRIALEDDGVTIQPFGATIPYY---------FTGH--EGPDSCCIDSDDN-LYVAMYGQ--GRVLV 258 (333)
T ss_dssp ----------GTEEEEEEECTTSSSEEEEEEEEEEE---------CCSS--SEEEEEEEBTTCC-EEEEEETT--TEEEE
T ss_pred ----------CCeEEEEEecCCCcCcccccceEEEe---------cCCC--CCCCceEECCCCC-EEEEEcCC--CEEEE
Confidence 24689999864321100000000000 0000 0123467889987 55554322 35777
Q ss_pred EECCCCcEEEecCCCC------CceeeEEeecCCEEEEEEeCCC--CCCeEEEEEec
Q 004149 418 VNVSSGELLRITPAES------NFSWSLLTLDGDNIIAVSSSPV--DVPQVKYGYFV 466 (771)
Q Consensus 418 ~d~~tg~~~~l~~~~~------~~~~~~~s~d~~~l~~~~s~~~--~p~~l~~~~~~ 466 (771)
++.++..+..+..... ......+++|++.|++...... ....||.++..
T Consensus 259 ~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 259 FNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp ECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred ECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 8886555555543321 2455678889888887776543 23456666543
No 360
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.03 E-value=4.6e-08 Score=100.24 Aligned_cols=243 Identities=12% Similarity=0.068 Sum_probs=142.2
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCC
Q 004149 101 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 180 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 180 (771)
...|.|+|++..|+++... ...++.++..+...........+ .++.|+|||+ |+.. .
T Consensus 15 ~Egp~w~~~~~~l~~~d~~---~~~i~~~d~~~~~~~~~~~~~~~----------~~i~~~~dG~-l~v~-~-------- 71 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIP---AKKVCRWDSFTKQVQRVTMDAPV----------SSVALRQSGG-YVAT-I-------- 71 (297)
T ss_dssp EEEEEEETTTTEEEEEETT---TTEEEEEETTTCCEEEEECSSCE----------EEEEEBTTSS-EEEE-E--------
T ss_pred ccCCeEECCCCEEEEEECC---CCEEEEEECCCCcEEEEeCCCce----------EEEEECCCCC-EEEE-E--------
Confidence 3479999998888876442 34577777333333344433333 5889999999 3332 1
Q ss_pred ccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCC---CCccceEEEecCCCCCccE
Q 004149 181 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK---SLSVGQVVWAPLNEGLHQY 257 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~---~~~~~~~~wspDg~~~~~~ 257 (771)
...|+++|.++++.+.+..... ...+..++++|||+
T Consensus 72 ------------------------------------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~----- 110 (297)
T 3g4e_A 72 ------------------------------------GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGR----- 110 (297)
T ss_dssp ------------------------------------TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSC-----
T ss_pred ------------------------------------CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCC-----
Confidence 1478999999888776631111 22456789999997
Q ss_pred EEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecC
Q 004149 258 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 337 (771)
Q Consensus 258 l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~ 337 (771)
|++.......... ........||.++. + ++...+.........++|||||+.|++....
T Consensus 111 l~~~~~~~~~~~~---~~~~~~~~l~~~d~-----------------~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 111 YFAGTMAEETAPA---VLERHQGALYSLFP-----------------D-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp EEEEEEECCSBTT---BCCTTCEEEEEECT-----------------T-SCEEEEEEEESBEEEEEECTTSCEEEEEEGG
T ss_pred EEEecCCcccccc---cccCCCcEEEEEEC-----------------C-CCEEEEeeccccccceEEcCCCCEEEEecCC
Confidence 6666532211000 00012347899885 3 4444444333445678999999998877654
Q ss_pred CCCCCCCccccccceeeecC--CCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 004149 338 SSVDSGAHSATDSLHRIDWP--TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 415 (771)
Q Consensus 338 ~~~~~g~~~~~~~l~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l 415 (771)
. ..|+++++. ++.. . ....+..+ ..... .+..+++.+||+ |+++.... ..|
T Consensus 170 ~----------~~i~~~~~d~~~G~~---~-~~~~~~~~---~~~~~-------~p~g~~~d~~G~-lwva~~~~--~~v 222 (297)
T 3g4e_A 170 S----------YSVDAFDYDLQTGQI---S-NRRSVYKL---EKEEQ-------IPDGMCIDAEGK-LWVACYNG--GRV 222 (297)
T ss_dssp G----------TEEEEEEECTTTCCE---E-EEEEEEEC---CGGGC-------EEEEEEEBTTSC-EEEEEETT--TEE
T ss_pred C----------CcEEEEeccCCCCcc---c-CcEEEEEC---CCCCC-------CCCeeEECCCCC-EEEEEcCC--CEE
Confidence 2 468888874 3331 0 00011110 00001 123567888985 66554333 358
Q ss_pred EEEECCCCcEEE-ecCCCCCceeeEEe-ecCCEEEEEEeCCC
Q 004149 416 ISVNVSSGELLR-ITPAESNFSWSLLT-LDGDNIIAVSSSPV 455 (771)
Q Consensus 416 ~~~d~~tg~~~~-l~~~~~~~~~~~~s-~d~~~l~~~~s~~~ 455 (771)
+++|.++|++.. +...........|+ +|++.|+++.....
T Consensus 223 ~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 223 IRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp EEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCTT
T ss_pred EEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCcC
Confidence 889998787654 43333345566787 78888888776543
No 361
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.03 E-value=7e-09 Score=112.66 Aligned_cols=148 Identities=14% Similarity=0.146 Sum_probs=92.0
Q ss_pred ceEEEEEccCCc----eeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccch
Q 004149 218 PSLFVININSGE----VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 293 (771)
Q Consensus 218 ~~l~v~d~~~~~----~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 293 (771)
..|++||+.++. ...+ ......+..++|+|+++. +++++. ....|.++|+..
T Consensus 254 g~i~i~d~~~~~~~~~~~~~--~~~~~~v~~i~~~p~~~~----~l~tg~--------------~dg~v~vwd~~~---- 309 (430)
T 2xyi_A 254 QKLMIWDTRNNNTSKPSHTV--DAHTAEVNCLSFNPYSEF----ILATGS--------------ADKTVALWDLRN---- 309 (430)
T ss_dssp SEEEEEETTCSCSSSCSEEE--ECCSSCEEEEEECSSCTT----EEEEEE--------------TTSEEEEEETTC----
T ss_pred CeEEEEECCCCCCCcceeEe--ecCCCCeEEEEeCCCCCC----EEEEEe--------------CCCeEEEEeCCC----
Confidence 689999998762 2233 234456889999999998 777662 234788888720
Q ss_pred hhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCcccee----
Q 004149 294 ASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIV---- 369 (771)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~---- 369 (771)
.......+..+...+....|+|+|+.++.....+ ..|.+||+...+..+......
T Consensus 310 -----------~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~ 368 (430)
T 2xyi_A 310 -----------LKLKLHSFESHKDEIFQVQWSPHNETILASSGTD----------RRLHVWDLSKIGEEQSTEDAEDGPP 368 (430)
T ss_dssp -----------TTSCSEEEECCSSCEEEEEECSSCTTEEEEEETT----------SCCEEEEGGGTTCCCCHHHHHHCCT
T ss_pred -----------CCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCC----------CcEEEEeCCCCccccCccccccCCc
Confidence 1223455656677789999999998755555432 358888886633211100000
Q ss_pred eEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEE
Q 004149 370 DVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 419 (771)
Q Consensus 370 ~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d 419 (771)
.+...... +...+..++|+|+++.++++...++...+|.++
T Consensus 369 ~~~~~~~~---------h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 369 ELLFIHGG---------HTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp TEEEECCC---------CSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred ceEEEcCC---------CCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 00100000 112355788999999777787778888888764
No 362
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.02 E-value=9.9e-08 Score=103.11 Aligned_cols=246 Identities=15% Similarity=0.092 Sum_probs=151.8
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
-+.....||+++ .||...+. .+.+| ..++..++..+... .+ .+.+++|||||++||..+.
T Consensus 106 ~y~~~l~wS~~n-~lAvgld~------tV~lWd~~tg~~~~~~~~~~~-~~------~V~sv~fspdg~~lasgs~---- 167 (420)
T 4gga_A 106 YYLNLVDWSSGN-VLAVALDN------SVYLWSASSGDILQLLQMEQP-GE------YISSVAWIKEGNYLAVGTS---- 167 (420)
T ss_dssp TTCBCEEECTTS-EEEEEETT------EEEEEETTTCCEEEEEECCST-TC------CEEEEEECTTSSEEEEEET----
T ss_pred ccceeEEECCCC-EEEEEeCC------EEEEEECCCCCEEEEEEecCC-CC------cEEEEEECCCCCEEEEEEC----
Confidence 456779999865 67765432 35566 45565666554221 11 2369999999999988643
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004149 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
+..|.+||+.+++..... ......+. ++++|++.
T Consensus 168 ----------------------------------------Dg~v~iWd~~~~~~~~~~-~~h~~~v~--~~s~~~~~--- 201 (420)
T 4gga_A 168 ----------------------------------------SAEVQLWDVQQQKRLRNM-TSHSARVG--SLSWNSYI--- 201 (420)
T ss_dssp ----------------------------------------TSCEEEEETTTTEEEEEE-CCCSSCEE--EEEEETTE---
T ss_pred ----------------------------------------CCeEEEEEcCCCcEEEEE-eCCCCceE--EEeeCCCE---
Confidence 357899999988765541 22333344 44556664
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEec
Q 004149 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~ 336 (771)
|+..+ ....++.+|... .......+..+...+....|+|+|+.|+....
T Consensus 202 -l~sgs---------------~d~~i~~~d~~~---------------~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~ 250 (420)
T 4gga_A 202 -LSSGS---------------RSGHIHHHDVRV---------------AEHHVATLSGHSQEVCGLRWAPDGRHLASGGN 250 (420)
T ss_dssp -EEEEE---------------TTSEEEEEETTS---------------SSCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred -EEEEe---------------CCCceeEeeecc---------------cceeeEEecccccceeeeeecCCCCeeeeeec
Confidence 55443 334677777621 12233455666677888999999999988776
Q ss_pred CCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 004149 337 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 416 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~ 416 (771)
+. .+.+++..+++.......... . ....+...+|+|++..++++........|.
T Consensus 251 D~-----------~v~i~~~~~~~~~~~~~~~~~-----------~----~~~~V~~~~~~p~~~~~la~~~gs~D~~I~ 304 (420)
T 4gga_A 251 DN-----------LVNVWPSAPGEGGWVPLQTFT-----------Q----HQGAVKAVAWCPWQSNVLATGGGTSDRHIR 304 (420)
T ss_dssp TS-----------CEEEEESSCCSSCSCCSEEEC-----------C----CSSCEEEEEECTTCTTEEEEEECTTTCEEE
T ss_pred cc-----------cceEEeeccccccceeeeeec-----------c----cCCceeeeeeCCCcccEEEEEeecCCCEEE
Confidence 53 477888776654221110000 0 011234668999888787765533334566
Q ss_pred EEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004149 417 SVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 417 ~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~ 467 (771)
.+|+.+++..........+....++++++.++......+ ..|++.+..+
T Consensus 305 iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d--~~I~iwd~~~ 353 (420)
T 4gga_A 305 IWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQ--NQLVIWKYPT 353 (420)
T ss_dssp EEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTT--CCEEEEETTT
T ss_pred EEeCCccccceeeccccceeeeeecCCCCeEEEEEecCC--CEEEEEECCC
Confidence 668989887766555555666788999998887654333 2466666543
No 363
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.01 E-value=4.4e-07 Score=94.70 Aligned_cols=125 Identities=13% Similarity=0.120 Sum_probs=72.6
Q ss_pred ceeec-CCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccc--cCCCCCcccccCCCCCCccc
Q 004149 321 FPRFS-PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQC--AEGDCFPGLYSSSILSNPWL 397 (771)
Q Consensus 321 ~p~~S-pDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~f~g~~~~~~~~~~~s 397 (771)
.+.|. +||+ ++|.+.. .+++++|+.++..+.+ ... .++.. ...+-.| .....++++
T Consensus 230 ~~~~~~~dG~-~~~vs~~-----------g~V~v~d~~~~~~~v~-~~~----~~~~~~~~~~g~~p----~g~q~~a~~ 288 (386)
T 3sjl_D 230 HPAYSQKAGR-LVWPTYT-----------GKIHQIDLSSGDAKFL-PAV----EALTEAERADGWRP----GGWQQVAYH 288 (386)
T ss_dssp CCEEETTTTE-EEEEBTT-----------SEEEEEECTTSSCEEC-CCE----ESSCHHHHHTTEEE----CSSSCEEEE
T ss_pred cceeEcCCCc-EEEEeCC-----------CEEEEEECCCCcceee-cce----eccccccccccccC----CCcceeeEC
Confidence 45674 7875 6777753 2599999876653211 100 00000 0000011 123456778
Q ss_pred cCCCEEEEEeeeC-------CeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 398 SDGCTMLLSSIWG-------SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 398 ~dg~~l~~~~~~~-------~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
+|+++||+....+ ...+++.+|++++++.+-..-........+++|++.++|+.+. ....+.++|..++
T Consensus 289 ~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~--~~~~VsViD~~t~ 364 (386)
T 3sjl_D 289 RALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALST--GDKTLYIHDAESG 364 (386)
T ss_dssp TTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEET--TTTEEEEEETTTC
T ss_pred CCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcC--CCCeEEEEECCCC
Confidence 9999998876532 2468999999999876543322223457899999855555442 2345788886654
No 364
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.01 E-value=1.5e-08 Score=110.35 Aligned_cols=158 Identities=7% Similarity=0.060 Sum_probs=98.1
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCC---cceEEEecCC---cccccccCCCcccceeecCCC-CeEEEEe
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS---QLEKEFHVPQ---TVHGSVYADGWFEGISWNSDE-TLIAYVA 171 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~g~~~~~~~~~~~~wSpDg-~~la~~~ 171 (771)
..+...+|||||+.|+.. .. + .+.+|+-. ...+++.... ..| ...+.+++|+||| +.|+..+
T Consensus 178 ~~v~~~~~~~~~~~l~s~-~d--~---~i~iwd~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~p~~~~~l~s~~ 246 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA-DD--L---RINLWHLEITDRSFNIVDIKPANMEEL-----TEVITAAEFHPNSCNTFVYSS 246 (447)
T ss_dssp SCCCEEEECTTSSEEEEE-CS--S---EEEEEETTEEEEEEEEEECCCSSGGGC-----CCCEEEEEECSSCTTEEEEEE
T ss_pred cceEEEEEcCCCCEEEEe-CC--C---eEEEEECCCCCceeeeeeccccccccc-----CcceEEEEECCCCCcEEEEEe
Confidence 457889999999999865 32 2 45566322 2222222110 111 1234789999999 7777754
Q ss_pred cCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce-----eeccCCCCCC------
Q 004149 172 EEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV-----QAVKGIPKSL------ 240 (771)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~-----~~l~~~~~~~------ 240 (771)
. ...|.+||+.+++. ..+. ....
T Consensus 247 ~--------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~ 280 (447)
T 3dw8_B 247 S--------------------------------------------KGTIRLCDMRASALCDRHSKLFE--EPEDPSNRSF 280 (447)
T ss_dssp T--------------------------------------------TSCEEEEETTTCSSSCTTCEEEC--CC-----CCH
T ss_pred C--------------------------------------------CCeEEEEECcCCccccceeeEec--cCCCcccccc
Confidence 3 25789999988774 4442 2221
Q ss_pred ------ccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCC-Cc-ceec
Q 004149 241 ------SVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-LP-VVNL 312 (771)
Q Consensus 241 ------~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~-~~~l 312 (771)
.+..+.|+|||+. |+..+ . ..|.++|+ .. ++ ...+
T Consensus 281 ~~~~~~~v~~~~~s~~g~~----l~~~~---------------~-~~v~iwd~-----------------~~~~~~~~~~ 323 (447)
T 3dw8_B 281 FSEIISSISDVKFSHSGRY----MMTRD---------------Y-LSVKVWDL-----------------NMENRPVETY 323 (447)
T ss_dssp HHHHTTCEEEEEECTTSSE----EEEEE---------------S-SEEEEEET-----------------TCCSSCSCCE
T ss_pred ccccCceEEEEEECCCCCE----EEEee---------------C-CeEEEEeC-----------------CCCcccccee
Confidence 6788999999997 77554 2 37888887 32 32 2333
Q ss_pred CCCCcc---------------ccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCC
Q 004149 313 TESISS---------------AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 361 (771)
Q Consensus 313 t~~~~~---------------~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~ 361 (771)
..+... .....|||||++|+..+.+ ..|++||+.+++.
T Consensus 324 ~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d-----------g~v~iwd~~~~~~ 376 (447)
T 3dw8_B 324 QVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN-----------NFFRMFDRNTKRD 376 (447)
T ss_dssp ESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECST-----------TEEEEEETTTCCE
T ss_pred eccccccccccccccccccccceEEEECCCCCEEEEeccC-----------CEEEEEEcCCCcc
Confidence 322211 1238999999998766544 3588999887764
No 365
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.01 E-value=1.3e-08 Score=105.20 Aligned_cols=263 Identities=15% Similarity=0.082 Sum_probs=148.5
Q ss_pred eEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccc
Q 004149 72 KFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSV 149 (771)
Q Consensus 72 ~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~ 149 (771)
+.+.+|++.++ +..++... ......+...+|||+|++||..+..+ .+.+|+ .++..+.......
T Consensus 45 ~tV~iWd~~tg--~~~~~~~~--~~~~~~V~~v~~~~~~~~l~sgs~Dg-----~v~iw~~~~~~~~~~~~~h~~----- 110 (318)
T 4ggc_A 45 NSVYLWSASSG--DILQLLQM--EQPGEYISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRNMTSHSA----- 110 (318)
T ss_dssp TEEEEEETTTC--CEEEEEEC--CSTTCCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEECCSS-----
T ss_pred CEEEEEECCCC--CEEEEEEe--cCCCCeEEEEEECCCCCEEEEEECCC-----cEEEeecCCceeEEEecCccc-----
Confidence 45777776433 33222111 11124578899999999998766544 566773 3333222221111
Q ss_pred cCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCC-CCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCC
Q 004149 150 YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGST-KGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG 228 (771)
Q Consensus 150 ~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~ 228 (771)
....++++++.|+..+...... .+..... ........+........+.++....+++.....|.+||+.++
T Consensus 111 ------~~~~~~~~~~~l~s~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 182 (318)
T 4ggc_A 111 ------RVGSLSWNSYILSSGSRSGHIH--HHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 182 (318)
T ss_dssp ------CEEEEEEETTEEEEEETTSEEE--EEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCB
T ss_pred ------eEEEeecCCCEEEEEecCCceE--eeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCC
Confidence 2456778888777665443221 0110000 000011112222233445555445555666788999999876
Q ss_pred ceeecc---CCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCC
Q 004149 229 EVQAVK---GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE 305 (771)
Q Consensus 229 ~~~~l~---~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 305 (771)
+..... .......+....|+|++.. +++.... .....|.++|. .
T Consensus 183 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~~~~~~~------------~~~~~i~lwd~-----------------~ 229 (318)
T 4ggc_A 183 EGGWVPLQTFTQHQGAVKAVAWCPWQSN----VLATGGG------------TSDRHIRIWNV-----------------C 229 (318)
T ss_dssp TTBSCCSEEECCCCSCEEEEEECTTSTT----EEEEEEC------------TTTCEEEEEET-----------------T
T ss_pred cccccceeeecccCCceEEEEecCCCCc----EEEEEec------------CCCCEEEEEec-----------------c
Confidence 532210 0223345678899999998 8765421 22336777786 4
Q ss_pred CCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcc
Q 004149 306 DLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPG 385 (771)
Q Consensus 306 ~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g 385 (771)
.............+....|+|+++.++..+... ...|++||+.+++......+
T Consensus 230 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~---------d~~i~iwd~~~~~~~~~l~g------------------ 282 (318)
T 4ggc_A 230 SGACLSAVDAHSQVCSILWSPHYKELISGHGFA---------QNQLVIWKYPTMAKVAELKG------------------ 282 (318)
T ss_dssp TCCEEEEEECSSCEEEEEEETTTTEEEEEECTT---------TCCEEEEETTTCCEEEEECC------------------
T ss_pred cccccccccceeeeeeeeecccccceEEEEEcC---------CCEEEEEECCCCcEEEEEcC------------------
Confidence 454444444555677889999999998876432 24699999887654221111
Q ss_pred cccCCCCCCccccCCCEEEEEeeeCCeeEEEEE
Q 004149 386 LYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 418 (771)
Q Consensus 386 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~ 418 (771)
+...+..++|+|||+.| ++.+.++...||.+
T Consensus 283 -H~~~V~~l~~spdg~~l-~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 283 -HTSRVLSLTMSPDGATV-ASAAADETLRLWRC 313 (318)
T ss_dssp -CSSCEEEEEECTTSSCE-EEEETTTEEEEECC
T ss_pred -CCCCEEEEEEcCCCCEE-EEEecCCeEEEEEC
Confidence 11235577899999855 56677777777743
No 366
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.00 E-value=1.5e-07 Score=100.21 Aligned_cols=300 Identities=9% Similarity=0.028 Sum_probs=154.9
Q ss_pred CCcceEEEEEeechhhcccceeEEEEEEeecCCCCcc-ceeecCCccccccceEEEeCCCCCeEEEEecC------CCCC
Q 004149 51 GNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSV-TFQWAPFPVEMTGASAVVPSPSGSKLLVVRNP------ENES 123 (771)
Q Consensus 51 ~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~------~~~~ 123 (771)
+|+.+ +|+.++.. .+.. ..+.++|. ...+.. ++... ..- .+++||||++|+..... ++..
T Consensus 82 ~~~~~-vyV~n~~~--~~~~-~~VsVID~--~t~~vv~~I~vG------~~P-gia~SpDgk~lyVan~~~~~~~~G~~~ 148 (426)
T 3c75_H 82 PDARR-VYIQDPAH--FAAI-TQQFVIDG--STGRILGMTDGG------FLP-HPVAAEDGSFFAQASTVFERIARGKRT 148 (426)
T ss_dssp CCTTE-EEEEECTT--TCSS-EEEEEEET--TTTEEEEEEEEC------SSC-EEEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred CCCCE-EEEECCCc--CCCC-CeEEEEEC--CCCEEEEEEECC------CCC-ceEECCCCCEEEEEeccccccccCCCC
Confidence 57866 45555421 0001 56777664 322222 22222 123 78999999998654321 0112
Q ss_pred CeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcc
Q 004149 124 PIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQG 202 (771)
Q Consensus 124 ~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (771)
..+..++ ...+..+.+.+..... .-....-..+.+||||++|+.....
T Consensus 149 ~~VsviD~~t~~vv~~I~v~g~~r--~~~g~~P~~~~~spDGk~lyV~n~~----------------------------- 197 (426)
T 3c75_H 149 DYVEVFDPVTFLPIADIELPDAPR--FLVGTYQWMNALTPDNKNLLFYQFS----------------------------- 197 (426)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCC--CCBSCCGGGSEECTTSSEEEEEECS-----------------------------
T ss_pred CEEEEEECCCCcEEEEEECCCccc--cccCCCcceEEEcCCCCEEEEEecC-----------------------------
Confidence 3466666 4455555555431000 0000011488999999987665321
Q ss_pred cccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCcee
Q 004149 203 DWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCAL 282 (771)
Q Consensus 203 ~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l 282 (771)
....|.++|+.++++..- ++-... ....|+|+. .++... ....+
T Consensus 198 -------------~~~~VsVID~~t~kvv~~--I~v~g~---~~~~p~g~~----~~v~~~--------------~dG~~ 241 (426)
T 3c75_H 198 -------------PAPAVGVVDLEGKTFDRM--LDVPDC---YHIFPASPT----VFYMNC--------------RDGSL 241 (426)
T ss_dssp -------------SSCEEEEEETTTTEEEEE--EECCSE---EEEEEEETT----EEEEEE--------------TTSSE
T ss_pred -------------CCCeEEEEECCCCeEEEE--EEcCCc---eeeccCCCc----EEEEEc--------------CCCCE
Confidence 136799999999887543 221111 234455554 443321 11234
Q ss_pred EEEecccccchhhhhhhhcCCCCCCcce-----ecCCCC-ccccceeecCCCCEEEEEecCCCCCCCCccccccceeeec
Q 004149 283 YAVRVSLYKSEASELELKESSSEDLPVV-----NLTESI-SSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW 356 (771)
Q Consensus 283 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~-----~lt~~~-~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~ 356 (771)
..+++ .+++.. .+.... .....+.+++||+.++|.... ..++++|+
T Consensus 242 ~~V~~-----------------~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~-----------g~V~ViD~ 293 (426)
T 3c75_H 242 ARVDF-----------------ADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYT-----------GKIFQADL 293 (426)
T ss_dssp EEEEC-----------------CTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTT-----------SEEEEEEE
T ss_pred EEEEC-----------------CCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCC-----------CcEEEEec
Confidence 44444 222211 011111 112346789999999988743 25999998
Q ss_pred CCCCCCCCccceeeEEecccccCCCCC-cccccCCCCCCccccCCCEEEEEeeeC-------CeeEEEEEECCCCcEEEe
Q 004149 357 PTNGNFSSLEKIVDVIPVVQCAEGDCF-PGLYSSSILSNPWLSDGCTMLLSSIWG-------SSQVIISVNVSSGELLRI 428 (771)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~f-~g~~~~~~~~~~~s~dg~~l~~~~~~~-------~~~~l~~~d~~tg~~~~l 428 (771)
.++....+. .+........ .|........+.+++|+++||+..... ....+..||..++++..-
T Consensus 294 ~~~~~~v~~--------~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~ 365 (426)
T 3c75_H 294 TAEGATFRA--------PIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINK 365 (426)
T ss_dssp CSSCEEECC--------CEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE
T ss_pred cCCceEEee--------eeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEE
Confidence 665432110 0000000000 000001223467899999998876432 246799999999886643
Q ss_pred cCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 429 TPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 429 ~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
..-........+++||+.++++.... -..|.++|..+.
T Consensus 366 I~vg~~P~gia~spDg~~~lyv~n~~--s~~VsVID~~t~ 403 (426)
T 3c75_H 366 IELGHEIDSINVSQDAEPLLYALSAG--TQTLHIYDAATG 403 (426)
T ss_dssp EEEEEEECEEEECCSSSCEEEEEETT--TTEEEEEETTTC
T ss_pred EECCCCcCeEEEccCCCEEEEEEcCC--CCeEEEEECCCC
Confidence 32222234568999999444444322 355888887554
No 367
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.00 E-value=7.3e-09 Score=120.96 Aligned_cols=230 Identities=12% Similarity=0.132 Sum_probs=141.4
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCC--CCeEEEEecCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEP 174 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpD--g~~la~~~~~~ 174 (771)
+.+...+|||||++|+.....+ .+.+| .++....+..+. +..+. +.+++|+|+ |+.|+..+.+
T Consensus 10 ~~V~~l~~s~dg~~latg~~dg-----~I~vwd~~~~~~~~~~~l~-~h~~~------V~~l~~s~~~~~~~l~s~s~D- 76 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSDK-----TIKIFEVEGETHKLIDTLT-GHEGP------VWRVDWAHPKFGTILASCSYD- 76 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETTT-----EEEEEEEETTEEEEEEEEC-CCSSC------EEEEEECCTTSCSEEEEEETT-
T ss_pred ceeEEEEECCCCCeEEEEECCC-----cEEEEecCCCCCccceecc-CCcCc------eEEEEecCCCCCCEEEEEeCC-
Confidence 4588899999999998775543 45555 222222222221 11222 268999998 9888886432
Q ss_pred CCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce---eeccCCCCCCccceEEEecC-
Q 004149 175 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV---QAVKGIPKSLSVGQVVWAPL- 250 (771)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~---~~l~~~~~~~~~~~~~wspD- 250 (771)
..|.+||+.+++. ..+ ......+..+.|+|+
T Consensus 77 -------------------------------------------g~I~vwd~~~~~~~~~~~~--~~h~~~V~~v~~sp~~ 111 (753)
T 3jro_A 77 -------------------------------------------GKVLIWKEENGRWSQIAVH--AVHSASVNSVQWAPHE 111 (753)
T ss_dssp -------------------------------------------SCEEEEEEETTEEEEEEEE--CCCSSCEEEEEECCGG
T ss_pred -------------------------------------------CeEEEEECCCCcccccccc--cCCCCCeEEEEECCCC
Confidence 5789999998863 333 334557889999999
Q ss_pred -CCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC---cceecCCCCccccceeecC
Q 004149 251 -NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL---PVVNLTESISSAFFPRFSP 326 (771)
Q Consensus 251 -g~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~lt~~~~~~~~p~~Sp 326 (771)
|+. ++..+ .+..|.++|+ .++ ....+..+...+....|+|
T Consensus 112 ~~~~----l~sgs---------------~dg~I~vwdl-----------------~~~~~~~~~~~~~~~~~v~~l~~~p 155 (753)
T 3jro_A 112 YGPL----LLVAS---------------SDGKVSVVEF-----------------KENGTTSPIIIDAHAIGVNSASWAP 155 (753)
T ss_dssp GCSE----EEEEE---------------TTSEEEEEEC-----------------CSSSCCCCEEEECCSSCEEEEEECC
T ss_pred CCCE----EEEEe---------------CCCcEEEEEe-----------------ecCCCcceeEeecCCCceEEEEecC
Confidence 776 66655 3347888887 333 2344555666788999999
Q ss_pred -------------CCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCC
Q 004149 327 -------------DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILS 393 (771)
Q Consensus 327 -------------DG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~ 393 (771)
||+.|+..+.+. .|.+||+.++.... .....+.. +...+..
T Consensus 156 ~~~~~~~~~~~~~d~~~l~sgs~dg-----------~I~iwd~~~~~~~~------~~~~~~~~---------h~~~V~~ 209 (753)
T 3jro_A 156 ATIEEDGEHNGTKESRKFVTGGADN-----------LVKIWKYNSDAQTY------VLESTLEG---------HSDWVRD 209 (753)
T ss_dssp CC---------CGGGCCEEEEETTS-----------CEEEEEEETTTTEE------EEEEEECC---------CSSCEEE
T ss_pred cccccccccccCCCCCEEEEEECCC-----------eEEEEeccCCcccc------eeeeeecC---------CCCcEEE
Confidence 688888777653 48888887654210 01111100 1113457
Q ss_pred CccccC---CCEEEEEeeeCCeeEEEEEECCCCcE---EEecC---CCCCceeeEEeecCCEEEEEE
Q 004149 394 NPWLSD---GCTMLLSSIWGSSQVIISVNVSSGEL---LRITP---AESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 394 ~~~s~d---g~~l~~~~~~~~~~~l~~~d~~tg~~---~~l~~---~~~~~~~~~~s~d~~~l~~~~ 451 (771)
++|+|+ ++ ++++...++...+|.+ .+++. ..+.. ....+....|+++++.++...
T Consensus 210 l~~sp~~~~~~-~l~s~s~Dg~I~iwd~--~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s 273 (753)
T 3jro_A 210 VAWSPTVLLRS-YLASVSQDRTCIIWTQ--DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 273 (753)
T ss_dssp EEECCCCSSSE-EEEEEESSSCEEEEEE--SSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEEC
T ss_pred EEeccCCCCCC-EEEEEecCCEEEEecC--CCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEc
Confidence 789999 65 5566666777667654 44421 11111 222345568899988776554
No 368
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=99.00 E-value=3e-10 Score=126.01 Aligned_cols=132 Identities=20% Similarity=0.169 Sum_probs=90.3
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcc-hHHHHHHHH-CCcEEEEECCCC-CCCCChhhhhcCCCC
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY-SKSLAFLSS-VGYSLLIVNYRG-SLGFGEEALQSLPGK 591 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~-~~~~~~la~-~G~~V~~~d~rG-~~~~g~~~~~~~~~~ 591 (771)
+.|.+.+ .+|.|+.. ..++.|+||++|||++....... ......|++ .|++|+.+|||. .-|++... ..+..
T Consensus 93 ~edcl~l--~v~~P~~~-~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~--~~~~~ 167 (543)
T 2ha2_A 93 SEDCLYL--NVWTPYPR-PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALP--GSREA 167 (543)
T ss_dssp ESCCCEE--EEEEESSC-CSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCT--TCSSC
T ss_pred CCcCCeE--EEeecCCC-CCCCCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCC--CCCCC
Confidence 3455555 46678642 34568999999999865543321 122345554 799999999994 22222211 00112
Q ss_pred ccccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHHhC--CCceeEEEecCCcc
Q 004149 592 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLC 651 (771)
Q Consensus 592 ~~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~p~~ 651 (771)
.+...+.|+.++++|+.++. ..|++||.|+|+|.||.+++.++... +.+|+++|+.+|..
T Consensus 168 ~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 168 PGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 23345899999999998862 36999999999999999998887643 46899999999853
No 369
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.00 E-value=4.3e-08 Score=103.33 Aligned_cols=109 Identities=14% Similarity=0.203 Sum_probs=74.7
Q ss_pred ccceEEEeCCC---CCeEEEEecCCCCCCeEEEEe---cCCcce-EEEec-CCcccccccCCCcccceeecCCCCeEEEE
Q 004149 99 TGASAVVPSPS---GSKLLVVRNPENESPIQFELW---SQSQLE-KEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYV 170 (771)
Q Consensus 99 ~~~~~~~~SPd---G~~la~~~~~~~~~~~~~~~~---~~~~~~-~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~ 170 (771)
+.+...+|||+ |+.|+.....+ .+.+| ..+... ..... ... +..++|+|||+.|+..
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~h~~~----------v~~~~~~~~~~~l~s~ 104 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWAN-----DVRCWEVQDSGQTIPKAQQMHTGP----------VLDVCWSDDGSKVFTA 104 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTS-----EEEEEEECTTSCEEEEEEEECSSC----------EEEEEECTTSSEEEEE
T ss_pred CceEEEEEcCCCCCceEEEEECCCC-----cEEEEEcCCCCceeEEEeccccCC----------EEEEEECcCCCEEEEE
Confidence 56889999999 68887765443 34455 213222 22221 222 2689999999999876
Q ss_pred ecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEE--e
Q 004149 171 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVW--A 248 (771)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~w--s 248 (771)
+. ...|.+||+.+++...+ ......+..+.| +
T Consensus 105 ~~--------------------------------------------dg~v~iwd~~~~~~~~~--~~~~~~v~~~~~~~~ 138 (368)
T 3mmy_A 105 SC--------------------------------------------DKTAKMWDLSSNQAIQI--AQHDAPVKTIHWIKA 138 (368)
T ss_dssp ET--------------------------------------------TSEEEEEETTTTEEEEE--EECSSCEEEEEEEEC
T ss_pred cC--------------------------------------------CCcEEEEEcCCCCceee--ccccCceEEEEEEeC
Confidence 43 25899999999988777 455567888999 8
Q ss_pred cCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEec
Q 004149 249 PLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRV 287 (771)
Q Consensus 249 pDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~ 287 (771)
||++. |+..+ .+..|+++|+
T Consensus 139 ~~~~~----l~~~~---------------~dg~i~vwd~ 158 (368)
T 3mmy_A 139 PNYSC----VMTGS---------------WDKTLKFWDT 158 (368)
T ss_dssp SSCEE----EEEEE---------------TTSEEEEECS
T ss_pred CCCCE----EEEcc---------------CCCcEEEEEC
Confidence 88886 66554 2346888887
No 370
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.99 E-value=2.1e-07 Score=103.60 Aligned_cols=366 Identities=8% Similarity=-0.048 Sum_probs=179.5
Q ss_pred chhhHHHHHHHHHHHHHhhcC-ccccc-----e--EEE--------ecCCCCcceEEEEEeechhhcccceeEEEEEEee
Q 004149 17 DATAEEEYASLSKLLQDFTNI-SSIDK-----A--WTF--------NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVIS 80 (771)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~--~~~--------~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (771)
..-+.+|++.+.+.++.+... |.+.. . .+. +..+.|....+|..... ...++++|..
T Consensus 113 ~~Lsd~ei~~l~~yi~~~~~~~~~~~~~~i~~s~kv~~~~~~~P~~~~~~~d~~~~~~V~~~~-------~~~V~viD~~ 185 (567)
T 1qks_A 113 GELSAEQVDLMANYLLLDPAAPPEFGMKEMRESWKVHVAPEDRPTQQMNDWDLENLFSVTLRD-------AGQIALIDGS 185 (567)
T ss_dssp CCCCHHHHHHHHHHHHSCCCCCCCCCHHHHHHHCEESSCGGGSCSSCCSCCCGGGEEEEEETT-------TTEEEEEETT
T ss_pred CCCCHHHHHHHHHHHhhcccCCCccchhhhhccceeeccccccccccccccCCCceEEEEeCC-------CCeEEEEECC
Confidence 345677777777766655431 11110 0 111 12244656667765442 3577876653
Q ss_pred cCCCCcc-ceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEec---CCcceEEEecCCcccccccCCCccc
Q 004149 81 KENENSV-TFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS---QSQLEKEFHVPQTVHGSVYADGWFE 156 (771)
Q Consensus 81 ~~~~~~~-~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~ 156 (771)
..+.. ++... .....+++||||++++.. ..+ ..+..++. ..+....+...... .
T Consensus 186 --t~~v~~~i~~g------~~p~~v~~SpDGr~lyv~-~~d---g~V~viD~~~~t~~~v~~i~~G~~P----------~ 243 (567)
T 1qks_A 186 --TYEIKTVLDTG------YAVHISRLSASGRYLFVI-GRD---GKVNMIDLWMKEPTTVAEIKIGSEA----------R 243 (567)
T ss_dssp --TCCEEEEEECS------SCEEEEEECTTSCEEEEE-ETT---SEEEEEETTSSSCCEEEEEECCSEE----------E
T ss_pred --CCeEEEEEeCC------CCccceEECCCCCEEEEE-cCC---CeEEEEECCCCCCcEeEEEecCCCC----------c
Confidence 22222 22222 234578999999988654 332 24666663 33333333332222 4
Q ss_pred ceeec----CCCCeEEEEecCCCCCCCCccCCCCCCCCCCccC----------CCCC-CcccccCCcCcccC-CccCceE
Q 004149 157 GISWN----SDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDC----------NSWK-GQGDWEEDWGETYA-GKRQPSL 220 (771)
Q Consensus 157 ~~~wS----pDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~~~~~d~g~~~~-~~~~~~l 220 (771)
.+.|| |||++|+...+.... ...++....+........ .... ..+..+++..+.++ .+....|
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~-v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v 322 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQ-YVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKI 322 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTE-EEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred eeEEccccCCCCCEEEEEEccCCe-EEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeE
Confidence 88999 799988776544211 111111111000000000 0000 01122222111111 1123566
Q ss_pred EEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhh
Q 004149 221 FVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELK 300 (771)
Q Consensus 221 ~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 300 (771)
+++|....+...+..++.........|+|||++ ++...+ ....|.++|+
T Consensus 323 ~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~----~~va~~--------------~sn~V~ViD~------------- 371 (567)
T 1qks_A 323 LLVDYTDLNNLKTTEISAERFLHDGGLDGSHRY----FITAAN--------------ARNKLVVIDT------------- 371 (567)
T ss_dssp EEEETTCSSEEEEEEEECCSSEEEEEECTTSCE----EEEEEG--------------GGTEEEEEET-------------
T ss_pred EEEecCCCccceeeeeeccccccCceECCCCCE----EEEEeC--------------CCCeEEEEEC-------------
Confidence 666655433222211122223446789999996 555542 2237899998
Q ss_pred cCCCCCCcceecCCC----Ccccccee-ecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecc
Q 004149 301 ESSSEDLPVVNLTES----ISSAFFPR-FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 375 (771)
Q Consensus 301 ~~~~~~~~~~~lt~~----~~~~~~p~-~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 375 (771)
.+++....... ....+.+. ++||+..++++.+-. ...|.++|.++++..... ..++..+
T Consensus 372 ----~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g---------~~~Vsvid~~~~~~~~~~---~kvv~~i 435 (567)
T 1qks_A 372 ----KEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMG---------DDSVALIGTDPEGHPDNA---WKILDSF 435 (567)
T ss_dssp ----TTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSS---------SSEEEEEECCTTTCTTTB---TSEEEEE
T ss_pred ----CCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCC---------CCeEEEecCCCCCCcccc---CEEEEEE
Confidence 66654332221 11113344 488888776555432 245888888764422110 1122222
Q ss_pred cccCCCCCcccccCCCCCCccccCCCEEEEEeeeC-C---eeEEEEEECCCC-----c--EEEecC--------CCCCce
Q 004149 376 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG-S---SQVIISVNVSSG-----E--LLRITP--------AESNFS 436 (771)
Q Consensus 376 ~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~-~---~~~l~~~d~~tg-----~--~~~l~~--------~~~~~~ 436 (771)
..... ....+..+||++.|++..... . ...+..+|+++. . .+.+.. ......
T Consensus 436 ~~~g~---------g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 506 (567)
T 1qks_A 436 PALGG---------GSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVV 506 (567)
T ss_dssp ECSCS---------CCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEE
T ss_pred ecCCC---------CCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceE
Confidence 22111 112345699999888765321 1 346777787665 1 133321 122345
Q ss_pred eeEEeecCCEEEEEE-eCCCCCCeEEEEEeccc
Q 004149 437 WSLLTLDGDNIIAVS-SSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 437 ~~~~s~d~~~l~~~~-s~~~~p~~l~~~~~~~~ 468 (771)
...|+++|++++++. +.......|.++|..+.
T Consensus 507 ~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~ 539 (567)
T 1qks_A 507 QGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL 539 (567)
T ss_dssp EEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred eeeECCCCCEEEEEeecCCCCCCcEEEEECCCc
Confidence 578999999999886 33446677888875543
No 371
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.99 E-value=3.8e-09 Score=117.05 Aligned_cols=304 Identities=10% Similarity=-0.032 Sum_probs=149.7
Q ss_pred hcccceeEEEEEEeecCCCCcc---ceeecCCccccccceEEEeCCC------CCeEEEEecCCCCCCeEEEEecCCcc-
Q 004149 66 LANKRKKFMLSTVISKENENSV---TFQWAPFPVEMTGASAVVPSPS------GSKLLVVRNPENESPIQFELWSQSQL- 135 (771)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~---~lt~~~~~~~~~~~~~~~~SPd------G~~la~~~~~~~~~~~~~~~~~~~~~- 135 (771)
+.....+.+.+|++........ .+... .+.+...+|||+ |+.||..+.. +.-.+|.+..+...
T Consensus 177 aS~s~D~tI~iWd~~~~~~~~~~~~~l~~~-----~~~V~~v~wsp~~~~~~~~~~LAs~s~D--gtvrlWd~~~~~~~~ 249 (524)
T 2j04_B 177 DKEKHSSCIQIFKMNTSTLHCVKVQTIVHS-----FGEVWDLKWHEGCHAPHLVGCLSFVSQE--GTINFLEIIDNATDV 249 (524)
T ss_dssp -----CEEEEEEEEETTTCCEEEEEEEEEC-----CCSEEEEEECSSCCCSSSSCEEEEEETT--SCEEEEECCCCSSSS
T ss_pred ccCCCCceEEEEEccCCCCCceEEEEEEec-----CCcEEEEEECCCCCCCCCCceEEEEecC--CeEEEEEcCCCcccc
Confidence 3445566777777754321111 12211 145788999997 5677766653 33333333222111
Q ss_pred eEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCC-CCCccCCCCCCcc--cccCCc-Ccc
Q 004149 136 EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGG-SSDKDCNSWKGQG--DWEEDW-GET 211 (771)
Q Consensus 136 ~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~d~-g~~ 211 (771)
............-......+.+++|+|++ .|+..+.+...+ .|+....... .....+......+ .|.++. ...
T Consensus 250 ~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~--lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~l 326 (524)
T 2j04_B 250 HVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVA--EFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVV 326 (524)
T ss_dssp SEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEE--EEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEE
T ss_pred ccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEE--EEECCCCCCceEEeecccccEEEEEEEcCCCCCeEE
Confidence 00000000000000001234789999975 687777665433 3433221111 1122334444444 466664 334
Q ss_pred cCCccCceEEEEEccCCceee-ccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccc
Q 004149 212 YAGKRQPSLFVININSGEVQA-VKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLY 290 (771)
Q Consensus 212 ~~~~~~~~l~v~d~~~~~~~~-l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~ 290 (771)
+++..+..|.+||+.+++... +.+......+..++||||++. ++..+ ....|.++|+
T Consensus 327 aS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~----l~s~~---------------~d~tv~lwd~--- 384 (524)
T 2j04_B 327 STVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYS----YIYSD---------------GASSLRAVPS--- 384 (524)
T ss_dssp EEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTE----EEEEC---------------SSSEEEEEET---
T ss_pred EEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCe----EEEeC---------------CCCcEEEEEC---
Confidence 566678899999998765422 211111123567899999987 76654 2235778887
Q ss_pred cchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCcccee
Q 004149 291 KSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIV 369 (771)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~ 369 (771)
..+. ...+..+...+.+.+|||||+.|+..+.+. .|.+||+..+-........
T Consensus 385 --------------~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dg-----------tv~lwd~~~~~~~~~~~~~- 438 (524)
T 2j04_B 385 --------------RAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADG-----------SLIITNAARRLLHGIKNSS- 438 (524)
T ss_dssp --------------TCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTT-----------EEECCBSCSSTTTCC-----
T ss_pred --------------cccccceeeecCCCceEEEEeCCCCCeEEEEECCC-----------EEEEEechHhhccccccCc-
Confidence 4444 356777777899999999999988766553 4777776542111000000
Q ss_pred eEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCC
Q 004149 370 DVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGD 445 (771)
Q Consensus 370 ~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~ 445 (771)
... .. ..+..++|+|||+.+-+ .+ ...++.++..+..+..+......+....|+|++.
T Consensus 439 ~~~--------~~------~~v~~v~~sp~g~~~~~---~~-~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~ 496 (524)
T 2j04_B 439 ATQ--------KS------LRLWKWDYSIKDDKYRI---DS-SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSA 496 (524)
T ss_dssp --C--------CC------CEEEECBCCSSSCEEEE---CC-CCCCCC-------------CCCSCCCEEECCSTT
T ss_pred cce--------ee------eEEEEeccCCCCCeEEc---cC-CceecccccCCcceeeecCCCceEEEEECCCCCC
Confidence 000 00 01235688999984422 11 1223333322333445555555566679999864
No 372
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.97 E-value=9.2e-08 Score=99.42 Aligned_cols=236 Identities=14% Similarity=0.087 Sum_probs=136.2
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCC
Q 004149 101 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 179 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 179 (771)
...|+|+|+++.++++... ..+++.++ .++.. +.+..+..+ .++.|+|||+.++..
T Consensus 51 ~egp~~~~~~~~l~~~d~~---~~~i~~~d~~~~~~-~~~~~~~~v----------~~i~~~~dg~l~v~~--------- 107 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNIL---ERELHELHLASGRK-TVHALPFMG----------SALAKISDSKQLIAS--------- 107 (326)
T ss_dssp EEEEEEETTTTEEEEEEGG---GTEEEEEETTTTEE-EEEECSSCE----------EEEEEEETTEEEEEE---------
T ss_pred CcCCeEeCCCCEEEEEECC---CCEEEEEECCCCcE-EEEECCCcc----------eEEEEeCCCeEEEEE---------
Confidence 3579999999888887543 24678777 44433 333333333 588999999865542
Q ss_pred CccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCC---CCccceEEEecCCCCCcc
Q 004149 180 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK---SLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~---~~~~~~~~wspDg~~~~~ 256 (771)
...|+++|.++++.+.+..... ...+..+.++|||+
T Consensus 108 -------------------------------------~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~---- 146 (326)
T 2ghs_A 108 -------------------------------------DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGA---- 146 (326)
T ss_dssp -------------------------------------TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSC----
T ss_pred -------------------------------------CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCC----
Confidence 1248999999888776631211 12456789999997
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEec
Q 004149 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~ 336 (771)
+++....... ......||+++ + ++.+.+.........+.|||||+.|++...
T Consensus 147 -l~v~~~~~~~--------~~~~~~l~~~~-~------------------g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 147 -LWIGTMGRKA--------ETGAGSIYHVA-K------------------GKVTKLFADISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp -EEEEEEETTC--------CTTCEEEEEEE-T------------------TEEEEEEEEESSEEEEEECTTSCEEEEEET
T ss_pred -EEEEeCCCcC--------CCCceEEEEEe-C------------------CcEEEeeCCCcccCCeEEcCCCCEEEEEEC
Confidence 6665421110 01234688887 2 233333332233557899999999988764
Q ss_pred CCCCCCCCccccccceeeecC--CC-CCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCee
Q 004149 337 KSSVDSGAHSATDSLHRIDWP--TN-GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 413 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~--~~-~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 413 (771)
.. ..|+++++. ++ .... ...+..+ ..... .+..+++.+||. |+++.... .
T Consensus 199 ~~----------~~I~~~d~~~~~Gl~~~~----~~~~~~~---~~~~~-------~p~gi~~d~~G~-lwva~~~~--~ 251 (326)
T 2ghs_A 199 KV----------NRLMRVPLDARTGLPTGK----AEVFIDS---TGIKG-------GMDGSVCDAEGH-IWNARWGE--G 251 (326)
T ss_dssp TT----------CEEEEEEBCTTTCCBSSC----CEEEEEC---TTSSS-------EEEEEEECTTSC-EEEEEETT--T
T ss_pred CC----------CEEEEEEcccccCCcccC----ceEEEEC---CCCCC-------CCCeeEECCCCC-EEEEEeCC--C
Confidence 32 469999975 44 2211 0001110 00001 123456788886 55544322 3
Q ss_pred EEEEEECCCCcEEEecCCCCCceeeEEe-ecCCEEEEEEeCCC
Q 004149 414 VIISVNVSSGELLRITPAESNFSWSLLT-LDGDNIIAVSSSPV 455 (771)
Q Consensus 414 ~l~~~d~~tg~~~~l~~~~~~~~~~~~s-~d~~~l~~~~s~~~ 455 (771)
.|++++.++..+..+...........|+ ++++.|+++.....
T Consensus 252 ~v~~~d~~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 252 AVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp EEEEECTTCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred EEEEECCCCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCCC
Confidence 6888898544445555443334556777 77787777665443
No 373
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.96 E-value=9.6e-08 Score=99.53 Aligned_cols=201 Identities=12% Similarity=0.084 Sum_probs=118.1
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe---cCCcceEEEecCCcccccccCCCcccceeecC--CCCeEEEEecC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW---SQSQLEKEFHVPQTVHGSVYADGWFEGISWNS--DETLIAYVAEE 173 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSp--Dg~~la~~~~~ 173 (771)
..+...+|||||++||.....+ .+.+| .+....++...-....+ .+.+++|+| |++.|+..+.+
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~~------~v~~~~~~~~~d~~~l~s~~~d 80 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSDQ-----HIKVFKLDKDTSNWELSDSWRAHDS------SIVAIDWASPEYGRIIASASYD 80 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----EEEEEEECSSSCCEEEEEEEECCSS------CEEEEEECCGGGCSEEEEEETT
T ss_pred cceeEEEEcCCCCEEEEeeCCC-----eEEEEECCCCCCcceecceeccCCC------cEEEEEEcCCCCCCEEEEEcCC
Confidence 4588999999999998775433 34444 22222122211111111 226899999 69988876432
Q ss_pred CCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCc----------eeeccCCCCCCccc
Q 004149 174 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE----------VQAVKGIPKSLSVG 243 (771)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~----------~~~l~~~~~~~~~~ 243 (771)
..|.+||+.+++ ...+ ......+.
T Consensus 81 --------------------------------------------g~v~vwd~~~~~~~~~~~~~~~~~~~--~~~~~~v~ 114 (351)
T 3f3f_A 81 --------------------------------------------KTVKLWEEDPDQEECSGRRWNKLCTL--NDSKGSLY 114 (351)
T ss_dssp --------------------------------------------SCEEEEEECTTSCTTSSCSEEEEEEE--CCCSSCEE
T ss_pred --------------------------------------------CeEEEEecCCCcccccccCcceeeee--cccCCcee
Confidence 578889988763 2333 34455688
Q ss_pred eEEEecC--CCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eec--------
Q 004149 244 QVVWAPL--NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNL-------- 312 (771)
Q Consensus 244 ~~~wspD--g~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~l-------- 312 (771)
.+.|+|+ ++. |+..+ .+..|.++|+ ..++. ..+
T Consensus 115 ~~~~~~~~~~~~----l~~~~---------------~dg~v~iwd~-----------------~~~~~~~~~~~~~~~~~ 158 (351)
T 3f3f_A 115 SVKFAPAHLGLK----LACLG---------------NDGILRLYDA-----------------LEPSDLRSWTLTSEMKV 158 (351)
T ss_dssp EEEECCGGGCSE----EEEEE---------------TTCEEEEEEC-----------------SSTTCTTCCEEEEEEES
T ss_pred EEEEcCCCCCcE----EEEec---------------CCCcEEEecC-----------------CChHHhccccccccccc
Confidence 8999999 886 66655 3346888887 22221 111
Q ss_pred -----CCCCccccceeecCC---CCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCc
Q 004149 313 -----TESISSAFFPRFSPD---GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFP 384 (771)
Q Consensus 313 -----t~~~~~~~~p~~SpD---G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 384 (771)
......+....|+|+ ++.|+..+.+. .+..++...+....+ ..+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~--------~~~~~------- 212 (351)
T 3f3f_A 159 LSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQ-----------AIIYQRGKDGKLHVA--------AKLPG------- 212 (351)
T ss_dssp CSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTE-----------EEEEEECTTSCEEEE--------EECCC-------
T ss_pred cccccCCcccceeEEEeccCCCCCcEEEEecCCC-----------cEEEEccCCCceeee--------eecCC-------
Confidence 123445778999998 88877766542 233333333321110 00000
Q ss_pred ccccCCCCCCccccCCC---EEEEEeeeCCeeEEEEEEC
Q 004149 385 GLYSSSILSNPWLSDGC---TMLLSSIWGSSQVIISVNV 420 (771)
Q Consensus 385 g~~~~~~~~~~~s~dg~---~l~~~~~~~~~~~l~~~d~ 420 (771)
+...+..++|+|++. .++++...++...+|.++.
T Consensus 213 --h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 213 --HKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp --CCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred --CCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 011345678999983 4667777778888887653
No 374
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.95 E-value=4.2e-08 Score=116.49 Aligned_cols=213 Identities=9% Similarity=0.076 Sum_probs=126.2
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
..+...+|||||+.||.....+ .+.+|+......+..... .+ .+..++||| |++|+..+.
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg-----~I~lw~~~~~~~~~~~~~--~~------~V~~l~fsp-g~~L~S~s~------ 77 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTG-----EVHIYGQQQVEVVIKLED--RS------AIKEMRFVK-GIYLVVINA------ 77 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTS-----EEEEECSTTCEEEEECSS--CC------CEEEEEEET-TTEEEEEET------
T ss_pred CCcEEEEECCCCCEEEEEeCCC-----EEEEEeCCCcEEEEEcCC--CC------CEEEEEEcC-CCEEEEEEC------
Confidence 4578899999999999876544 566774332222222221 11 237999999 887777543
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEE
Q 004149 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 258 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l 258 (771)
+..|.+||+.+++.... ......+..++|+|||+. |
T Consensus 78 --------------------------------------D~~v~lWd~~~~~~~~~--~~~~~~V~~v~~sp~g~~----l 113 (902)
T 2oaj_A 78 --------------------------------------KDTVYVLSLYSQKVLTT--VFVPGKITSIDTDASLDW----M 113 (902)
T ss_dssp --------------------------------------TCEEEEEETTTCSEEEE--EECSSCEEEEECCTTCSE----E
T ss_pred --------------------------------------cCeEEEEECCCCcEEEE--EcCCCCEEEEEECCCCCE----E
Confidence 36899999998875443 223346788999999997 7
Q ss_pred EEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc------------eecCCCCccccceeecC
Q 004149 259 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV------------VNLTESISSAFFPRFSP 326 (771)
Q Consensus 259 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~------------~~lt~~~~~~~~p~~Sp 326 (771)
+..+ .+..|.++|+ .++.. ..+..+...+.+.+|+|
T Consensus 114 ~sgs---------------~dg~V~lwd~-----------------~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp 161 (902)
T 2oaj_A 114 LIGL---------------QNGSMIVYDI-----------------DRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNP 161 (902)
T ss_dssp EEEE---------------TTSCEEEEET-----------------TTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEET
T ss_pred EEEc---------------CCCcEEEEEC-----------------CCCccccceeccccccccccccCCCCeEEEEEcc
Confidence 6654 2346888887 44432 12234556788999999
Q ss_pred CCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCC-----CcccccCCCCCCccccCCC
Q 004149 327 DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDC-----FPGLYSSSILSNPWLSDGC 401 (771)
Q Consensus 327 DG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-----f~g~~~~~~~~~~~s~dg~ 401 (771)
++..++.....+ ..+ +||+.+++........ ........ ........+..++|+|||+
T Consensus 162 ~~~~~l~~g~~d----------g~v-lWd~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~ 224 (902)
T 2oaj_A 162 RDIGTVLISYEY----------VTL-TYSLVENEIKQSFIYE------LPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL 224 (902)
T ss_dssp TEEEEEEEECSS----------CEE-EEETTTTEEEEEECCC------BCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS
T ss_pred CCCCEEEEEeCC----------CcE-EEECCCCceEEEEecc------cCCcCCCcccccccccccCCCeEEEEEcCCCC
Confidence 754333344332 347 8898776532110000 00000000 0000112355788999998
Q ss_pred EEEEEeeeCCeeEEEEEECCCCcEEE
Q 004149 402 TMLLSSIWGSSQVIISVNVSSGELLR 427 (771)
Q Consensus 402 ~l~~~~~~~~~~~l~~~d~~tg~~~~ 427 (771)
.| ++...++...|| |+.+++...
T Consensus 225 ~l-asgs~Dg~i~lW--d~~~g~~~~ 247 (902)
T 2oaj_A 225 HI-ITIHEDNSLVFW--DANSGHMIM 247 (902)
T ss_dssp EE-EEEETTCCEEEE--ETTTCCEEE
T ss_pred EE-EEEECCCeEEEE--ECCCCcEEE
Confidence 55 555556655555 787887654
No 375
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.95 E-value=2.9e-08 Score=102.81 Aligned_cols=246 Identities=11% Similarity=0.095 Sum_probs=136.3
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCc-cceeecCCccccccceEEEeCC--CCCeEEEEecCCCCCCeE
Q 004149 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENS-VTFQWAPFPVEMTGASAVVPSP--SGSKLLVVRNPENESPIQ 126 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~SP--dG~~la~~~~~~~~~~~~ 126 (771)
++||++|+-.. ..+.+.+|++....... ..+.. ..+.+...+|+| +|+.||..+... .
T Consensus 22 s~~g~~lasgs---------~D~~v~lwd~~~~~~~~~~~l~g-----H~~~V~~v~~~~~~~~~~l~s~s~D~-----~ 82 (316)
T 3bg1_A 22 DYYGTRLATCS---------SDRSVKIFDVRNGGQILIADLRG-----HEGPVWQVAWAHPMYGNILASCSYDR-----K 82 (316)
T ss_dssp CGGGCEEEEEE---------TTTEEEEEEEETTEEEEEEEEEC-----CSSCEEEEEECCGGGSSCEEEEETTS-----C
T ss_pred cCCCCEEEEEe---------CCCeEEEEEecCCCcEEEEEEcC-----CCccEEEEEeCCCCCCCEEEEEECCC-----E
Confidence 45777666432 33566777664331111 12221 225688899987 488888766543 4
Q ss_pred EEEec--CCcceEEEecCCcccccccCCCcccceeecCC--CCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcc
Q 004149 127 FELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQG 202 (771)
Q Consensus 127 ~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpD--g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (771)
..+|+ .+....+..+. +..+ .+.+++|+|| |+.|+..+.
T Consensus 83 v~iWd~~~~~~~~~~~~~-~h~~------~V~~v~~~p~~~g~~lasgs~------------------------------ 125 (316)
T 3bg1_A 83 VIIWREENGTWEKSHEHA-GHDS------SVNSVCWAPHDYGLILACGSS------------------------------ 125 (316)
T ss_dssp EEEECCSSSCCCEEEEEC-CCSS------CCCEEEECCTTTCSCEEEECS------------------------------
T ss_pred EEEEECCCCcceEEEEcc-CCCC------ceEEEEECCCCCCcEEEEEcC------------------------------
Confidence 56663 23222222221 1111 2268999998 777777543
Q ss_pred cccCCcCcccCCccCceEEEEEccCCce-eecc-CCCCCCccceEEEecCC-----------------CCCccEEEEEee
Q 004149 203 DWEEDWGETYAGKRQPSLFVININSGEV-QAVK-GIPKSLSVGQVVWAPLN-----------------EGLHQYLVFVGW 263 (771)
Q Consensus 203 ~~~~d~g~~~~~~~~~~l~v~d~~~~~~-~~l~-~~~~~~~~~~~~wspDg-----------------~~~~~~l~~~~~ 263 (771)
+..|.+||+.++.. .... .......+..+.|+|++ +. |+..+
T Consensus 126 --------------D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~sgs- 186 (316)
T 3bg1_A 126 --------------DGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKR----FASGG- 186 (316)
T ss_dssp --------------SSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCB----EECCB-
T ss_pred --------------CCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccce----EEEec-
Confidence 25788888876532 1110 02233456788999984 33 33322
Q ss_pred cCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC---cceecCCCCccccceeecCCC----CEEEEEec
Q 004149 264 SSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL---PVVNLTESISSAFFPRFSPDG----KFLVFLSA 336 (771)
Q Consensus 264 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~lt~~~~~~~~p~~SpDG----~~l~f~~~ 336 (771)
.+..|.++|+. ..+ ....+..+...+...+|||++ +.|+..+.
T Consensus 187 --------------~D~~v~lWd~~----------------~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~ 236 (316)
T 3bg1_A 187 --------------CDNLIKLWKEE----------------EDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQ 236 (316)
T ss_dssp --------------TTSBCCEEEEC----------------TTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEET
T ss_pred --------------CCCeEEEEEeC----------------CCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcC
Confidence 23356666651 122 234556666778999999997 67776665
Q ss_pred CCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 004149 337 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 416 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~ 416 (771)
+. .|.+|++.+......... +.. . +...+..++|+|||+.| ++...++...||
T Consensus 237 D~-----------~v~iw~~~~~~~~~~~~~---~~~--------~----~~~~v~~v~~sp~g~~l-as~~~D~~v~lw 289 (316)
T 3bg1_A 237 DG-----------RVFIWTCDDASSNTWSPK---LLH--------K----FNDVVWHVSWSITANIL-AVSGGDNKVTLW 289 (316)
T ss_dssp TC-----------EEEEEECSSTTCCCCBCC---EEE--------E----CSSCEEEEEECTTTCCE-EEEESSSCEEEE
T ss_pred CC-----------eEEEEEccCccccchhhh---hhh--------c----CCCcEEEEEEcCCCCEE-EEEcCCCeEEEE
Confidence 53 478888765321000000 000 0 11134577899999865 555667788888
Q ss_pred EEECCCCcEEEe
Q 004149 417 SVNVSSGELLRI 428 (771)
Q Consensus 417 ~~d~~tg~~~~l 428 (771)
..+.. |+..++
T Consensus 290 ~~~~~-g~~~~~ 300 (316)
T 3bg1_A 290 KESVD-GQWVCI 300 (316)
T ss_dssp EECTT-SCEEEE
T ss_pred EECCC-CcEEEe
Confidence 77653 554444
No 376
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.95 E-value=3.8e-08 Score=103.75 Aligned_cols=230 Identities=9% Similarity=0.045 Sum_probs=121.4
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEec-CCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
..+...+|||||+.||...+.. +.+|+......+... ..+. ....|+++++.++.++.... .
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~~------~~iw~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~d~-~ 82 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLKS------FEIYNVHPVAHIMSQEMRHL----------SKVRMLHRTNYVAFVTGVKE-V 82 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSSE------EEEEEETTEEEEEEEECSCC----------CEEEECTTSSEEEEECSSTT-E
T ss_pred CceEEEEECCCCCEEEEEcCCE------EEEEecCCcceeeeeecCCe----------EEEEEcCCCCEEEEEECCcc-E
Confidence 4588899999999998654321 346632222222211 1122 57889999998877654321 1
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCC-ceeeccCCCCCCccceEEEecCCCCCcc
Q 004149 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG-EVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~-~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
...|+........... .........+.++. +.......|++||+.++ +.... ... .....+++| +.
T Consensus 83 v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~---~~~~~~~~i~i~d~~~~~~~~~~--~~~--~~~~~~~s~--~~--- 149 (355)
T 3vu4_A 83 VHIWDDVKKQDVSRIK-VDAPVKDLFLSREF---IVVSYGDVISVFKFGNPWKRITD--DIR--FGGVCEFSN--GL--- 149 (355)
T ss_dssp EEEEETTTTEEEEEEE-CSSCEEEEEECSSE---EEEEETTEEEEEESSTTCCBSSC--CEE--EEEEEEEET--TE---
T ss_pred EEEEECCCCcEEEEEE-CCCceEEEEEcCCE---EEEEEcCEEEEEECCCCceeeEE--ecc--CCceEEEEc--cE---
Confidence 1223321111100000 11111122233321 11123456777777765 22111 111 233445666 43
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-----------------ceecCCCCccc
Q 004149 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-----------------VVNLTESISSA 319 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-----------------~~~lt~~~~~~ 319 (771)
+++.+ ......|.++|+ .++. ...+..+...+
T Consensus 150 -la~~s-------------g~~~g~v~iwd~-----------------~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v 198 (355)
T 3vu4_A 150 -LVYSN-------------EFNLGQIHITKL-----------------QSSGSATTQDQGVQQKAILGKGVLIKAHTNPI 198 (355)
T ss_dssp -EEEEE-------------SSCTTCEEEEEC-----------------CC------------------CCEEECCCSSCE
T ss_pred -EEEeC-------------CCcCcEEEEEEC-----------------CCCCccccccccccccccCcccEEEEccCCce
Confidence 66652 113346888887 3322 45667777889
Q ss_pred cceeecCCCCEEEEEecCCCCCCCCcccccc-ceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCcccc
Q 004149 320 FFPRFSPDGKFLVFLSAKSSVDSGAHSATDS-LHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 398 (771)
Q Consensus 320 ~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~-l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~ 398 (771)
...+|||||+.|+..+.+ .. |.+||+.+++.... +.. |.+...+..++|+|
T Consensus 199 ~~~~~s~~g~~l~s~s~d-----------~~~v~iwd~~~~~~~~~----------~~~-------g~h~~~v~~~~~s~ 250 (355)
T 3vu4_A 199 KMVRLNRKSDMVATCSQD-----------GTIIRVFKTEDGVLVRE----------FRR-------GLDRADVVDMKWST 250 (355)
T ss_dssp EEEEECTTSSEEEEEETT-----------CSEEEEEETTTCCEEEE----------EEC-------TTCCSCEEEEEECT
T ss_pred EEEEECCCCCEEEEEeCC-----------CCEEEEEECCCCcEEEE----------EEc-------CCCCCcEEEEEECC
Confidence 999999999998877755 34 88899887654211 100 00112355788999
Q ss_pred CCCEEEEEeeeCCeeEEEEE
Q 004149 399 DGCTMLLSSIWGSSQVIISV 418 (771)
Q Consensus 399 dg~~l~~~~~~~~~~~l~~~ 418 (771)
||+.| ++...++...||.+
T Consensus 251 ~~~~l-~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 251 DGSKL-AVVSDKWTLHVFEI 269 (355)
T ss_dssp TSCEE-EEEETTCEEEEEES
T ss_pred CCCEE-EEEECCCEEEEEEc
Confidence 99865 45555666666644
No 377
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=98.95 E-value=2.7e-09 Score=107.74 Aligned_cols=117 Identities=15% Similarity=0.137 Sum_probs=83.2
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcch-HHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhh
Q 004149 521 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVND 599 (771)
Q Consensus 521 l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~-~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D 599 (771)
+...++.|.. .+.+..+.||++||...+. ...|. .+...|+++||.|+.+|++|. |... .....++
T Consensus 50 L~~~i~~p~~-~~~~~~~pVVLvHG~~~~~-~~~w~~~l~~~L~~~Gy~V~a~DlpG~---G~~~--------~~~~~~~ 116 (316)
T 3icv_A 50 LDAGLTCQGA-SPSSVSKPILLVPGTGTTG-PQSFDSNWIPLSAQLGYTPCWISPPPF---MLND--------TQVNTEY 116 (316)
T ss_dssp HHHTEEETTB-BTTBCSSEEEEECCTTCCH-HHHHTTTHHHHHHHTTCEEEEECCTTT---TCSC--------HHHHHHH
T ss_pred HhhhEeCCCC-CCCCCCCeEEEECCCCCCc-HHHHHHHHHHHHHHCCCeEEEecCCCC---CCCc--------HHHHHHH
Confidence 4444666633 2334556799999965532 13465 678899999999999999983 3211 1123567
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhC---CCceeEEEecCCccc
Q 004149 600 VLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLCN 652 (771)
Q Consensus 600 ~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~---p~~~~a~v~~~p~~~ 652 (771)
+.+.++.+.+.. ..+++.|+||||||.++.+++..+ +++++.+|+++|...
T Consensus 117 la~~I~~l~~~~--g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 117 MVNAITTLYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp HHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHHHHHh--CCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 778888887763 347899999999999998777765 589999999988754
No 378
>1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22
Probab=98.95 E-value=2.8e-09 Score=104.76 Aligned_cols=198 Identities=13% Similarity=0.040 Sum_probs=106.6
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCC
Q 004149 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 616 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 616 (771)
.+.|+++||.+.. ...|...+..|.+ |.|+.+|++| ++. ..+++.+.++.+. ..+
T Consensus 17 ~~~l~~~hg~~~~--~~~~~~~~~~l~~--~~v~~~d~~g---~~~-------------~~~~~~~~i~~~~-----~~~ 71 (230)
T 1jmk_C 17 EQIIFAFPPVLGY--GLMYQNLSSRLPS--YKLCAFDFIE---EED-------------RLDRYADLIQKLQ-----PEG 71 (230)
T ss_dssp SEEEEEECCTTCC--GGGGHHHHHHCTT--EEEEEECCCC---STT-------------HHHHHHHHHHHHC-----CSS
T ss_pred CCCEEEECCCCCc--hHHHHHHHHhcCC--CeEEEecCCC---HHH-------------HHHHHHHHHHHhC-----CCC
Confidence 4789999997654 3467777777754 9999999997 321 1345555555441 135
Q ss_pred eEEEEEcChhHHHHHHHHHhC---CCceeEEEecCCccchh--hhhcCCCCCcch-hhhhccCCCCCcCCCCCChhhHH-
Q 004149 617 KVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLCNLA--LMVGTTDIPDWC-YVESYGSKGKDSFTESPSVEDLT- 689 (771)
Q Consensus 617 ri~l~G~S~GG~~a~~~a~~~---p~~~~a~v~~~p~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 689 (771)
++.++|||+||.+++.++.+. ++.++++++.++..... .+.......... +... .......+.. .......
T Consensus 72 ~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~ 149 (230)
T 1jmk_C 72 PLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNV-NRDNEALNSE-AVKHGLKQ 149 (230)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHH-TTTCSGGGSH-HHHHHHHH
T ss_pred CeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcccccccccHHHHHHHHHhc-ChhhhhhhhH-HHHHHHHH
Confidence 799999999999999998765 35688888877653211 000000000000 0000 0000000000 0000000
Q ss_pred ---HHhhcCc-cccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCc--cCCCCCChHHHHHHHH
Q 004149 690 ---RFHSKSP-ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVH--GIERPQSDFESFLNIG 763 (771)
Q Consensus 690 ---~~~~~sp-~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H--~~~~~~~~~~~~~~i~ 763 (771)
.+..... .....++++|+++++|++|..++. ....+.+ ....+++++.+++ +| .+. .+....+...+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-~~~~w~~---~~~~~~~~~~i~g-~H~~~~~-~~~~~~~~~~i~ 223 (230)
T 1jmk_C 150 KTHAFYSYYVNLISTGQVKADIDLLTSGADFDIPE-WLASWEE---ATTGAYRMKRGFG-THAEMLQ-GETLDRNAGILL 223 (230)
T ss_dssp HHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCCT-TEECSGG---GBSSCEEEEECSS-CGGGTTS-HHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccccccccccEEEEEeCCCCCCcc-ccchHHH---hcCCCeEEEEecC-ChHHHcC-cHhHHHHHHHHH
Confidence 0000000 023467889999999999998862 2111111 1123588999997 89 443 233334455555
Q ss_pred HHHH
Q 004149 764 LWFK 767 (771)
Q Consensus 764 ~wl~ 767 (771)
+||.
T Consensus 224 ~~l~ 227 (230)
T 1jmk_C 224 EFLN 227 (230)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 5554
No 379
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=98.94 E-value=2.4e-10 Score=126.97 Aligned_cols=131 Identities=21% Similarity=0.209 Sum_probs=88.5
Q ss_pred cCCCceEEEEEEec-----CCCCCCCC----CcEEEEEcCCCCCCCCCcc-hHHHHHHHHCCcEEEEECCCCCC-CCChh
Q 004149 515 KGAQKPFEAIFVSS-----SHKKDCSC----DPLIVVLHGGPHSVSLSSY-SKSLAFLSSVGYSLLIVNYRGSL-GFGEE 583 (771)
Q Consensus 515 ~~~g~~l~~~~~~P-----~~~~~~~~----~p~vv~~HGg~~~~~~~~~-~~~~~~la~~G~~V~~~d~rG~~-~~g~~ 583 (771)
+.|.+.+ .+|.| ... ..++ .|+||++|||++....... ......|+++|++|+.+|||... |+...
T Consensus 87 ~edcL~l--nv~~P~~~~~~~~-~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~ 163 (551)
T 2fj0_A 87 SEACIHA--NIHVPYYALPRDA-ADKNRFAGLPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSL 163 (551)
T ss_dssp CSCCCEE--EEEEEGGGCCCC---------CEEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHCCC
T ss_pred CCCCeEE--EEEecCccccccc-cccCcCCCCCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccccC
Confidence 3455444 57778 422 2233 8999999998865433321 12345677899999999999521 12111
Q ss_pred hhhcCCCCccccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHHh--CCCceeEEEecCCcc
Q 004149 584 ALQSLPGKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPLC 651 (771)
Q Consensus 584 ~~~~~~~~~~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~p~~ 651 (771)
.. ....+...+.|+.++++|+.++. ..|++||.|+|+|+||.+++.++.. .+.+|+++|+.+|..
T Consensus 164 ~~---~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 164 NS---TSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp SS---SSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred cc---cCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 00 11123345899999999998862 3689999999999999999988765 356899999998853
No 380
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.94 E-value=5.2e-07 Score=98.71 Aligned_cols=295 Identities=10% Similarity=0.067 Sum_probs=162.4
Q ss_pred eechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEE
Q 004149 61 SQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKE 138 (771)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~ 138 (771)
+..-+......+.+.+|++.... ....+. ...+.+...+|+|++ .++..+..+ .+.+| ..++....
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~-~~~~~~-----~h~~~V~~l~~~~~~-~l~s~s~dg-----~i~vwd~~~~~~~~~ 198 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKK-FLLQLS-----GHDGGVWALKYAHGG-ILVSGSTDR-----TVRVWDIKKGCCTHV 198 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTE-EEEEEC-----CCSSCEEEEEECSTT-EEEEEETTS-----CEEEEETTTTEEEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCc-EEEEEe-----CCCcCEEEEEEcCCC-EEEEEeCCC-----CEEEEECCCCcEEEE
Confidence 33344444556678887763321 112222 123568899999999 565554432 35556 23333333
Q ss_pred EecCCcccccccCCCcccceeec--CCCCeEEEEecCCCCCCCCccCCCCCCCCCCcc---------------------C
Q 004149 139 FHVPQTVHGSVYADGWFEGISWN--SDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKD---------------------C 195 (771)
Q Consensus 139 ~~~~~~~~g~~~~~~~~~~~~wS--pDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~ 195 (771)
... ..+ .+.++.|+ ||++.|+..+.+.... .|+............ .
T Consensus 199 ~~~---h~~------~v~~l~~~~~~~~~~l~s~s~d~~i~--vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (464)
T 3v7d_B 199 FEG---HNS------TVRCLDIVEYKNIKYIVTGSRDNTLH--VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR 267 (464)
T ss_dssp ECC---CSS------CEEEEEEEESSSCEEEEEEETTSCEE--EEECCCCCCC------CCSSEEESCGGGCTTEEEEEC
T ss_pred ECC---CCC------ccEEEEEecCCCCCEEEEEcCCCcEE--EeeCCCCcccccccccCCcceEeeccCCCeEEEEEcc
Confidence 221 111 12577777 6888888877655332 222111111000000 0
Q ss_pred CCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeee
Q 004149 196 NSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYC 275 (771)
Q Consensus 196 ~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~ 275 (771)
........+.++....+++..+..|.+||+.+++..... ......+..+.|+|||+. |+..+
T Consensus 268 ~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~----l~sg~------------- 329 (464)
T 3v7d_B 268 GHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYIL-SGHTDRIYSTIYDHERKR----CISAS------------- 329 (464)
T ss_dssp CCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEEETTTTE----EEEEE-------------
T ss_pred CccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCCEEEEEEcCCCCE----EEEEe-------------
Confidence 000001112334344555666789999999988765542 334456888999999997 77655
Q ss_pred ccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceee
Q 004149 276 YNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 354 (771)
Q Consensus 276 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~ 354 (771)
.+..|.++|+ .+++ ...+..+...+....|+ ++.|+..+.+ ..|.+|
T Consensus 330 --~dg~i~vwd~-----------------~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~d-----------g~v~vw 377 (464)
T 3v7d_B 330 --MDTTIRIWDL-----------------ENGELMYTLQGHTALVGLLRLS--DKFLVSAAAD-----------GSIRGW 377 (464)
T ss_dssp --TTSCEEEEET-----------------TTTEEEEEECCCSSCEEEEEEC--SSEEEEEETT-----------SEEEEE
T ss_pred --CCCcEEEEEC-----------------CCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCC-----------CcEEEE
Confidence 3347888898 4444 45566666677788887 5777766654 258899
Q ss_pred ecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEe-cCCCC
Q 004149 355 DWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI-TPAES 433 (771)
Q Consensus 355 d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l-~~~~~ 433 (771)
|+.++....... ........+|++|++.|+.. . ++ .+..+|+.+|+.... .....
T Consensus 378 d~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~l~~~-~-dg--~i~iwd~~~g~~~~~~~~~~~ 433 (464)
T 3v7d_B 378 DANDYSRKFSYH--------------------HTNLSAITTFYVSDNILVSG-S-EN--QFNIYNLRSGKLVHANILKDA 433 (464)
T ss_dssp ETTTCCEEEEEE--------------------CTTCCCEEEEEECSSEEEEE-E-TT--EEEEEETTTCCEEESCTTTTC
T ss_pred ECCCCceeeeec--------------------CCCCccEEEEEeCCCEEEEe-c-CC--eEEEEECCCCcEEehhhccCC
Confidence 987644211000 00123456799999866543 3 44 466668889987763 22222
Q ss_pred CceeeEEeecCCEEEEEEeC
Q 004149 434 NFSWSLLTLDGDNIIAVSSS 453 (771)
Q Consensus 434 ~~~~~~~s~d~~~l~~~~s~ 453 (771)
.....++.+++.++++.+.
T Consensus 434 -~~v~~v~~~~~~l~~~~~~ 452 (464)
T 3v7d_B 434 -DQIWSVNFKGKTLVAAVEK 452 (464)
T ss_dssp -SEEEEEEEETTEEEEEEEE
T ss_pred -CcEEEEEecCCEEEEEEEe
Confidence 2233444467777766654
No 381
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.94 E-value=1e-08 Score=105.54 Aligned_cols=266 Identities=8% Similarity=-0.020 Sum_probs=143.8
Q ss_pred hhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCc
Q 004149 65 LLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQT 144 (771)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (771)
+......+.+.+|++... .....+... ...+...+|+|+|+.|+..... +.-.+|.++.......+.... .
T Consensus 32 l~s~~~dg~v~vw~~~~~-~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d--g~i~~~~~~~~~~~~~~~~~~-~ 102 (313)
T 3odt_A 32 VASVSRDGTVRLWSKDDQ-WLGTVVYTG-----QGFLNSVCYDSEKELLLFGGKD--TMINGVPLFATSGEDPLYTLI-G 102 (313)
T ss_dssp EEEEETTSEEEEEEESSS-EEEEEEEEC-----SSCEEEEEEETTTTEEEEEETT--SCEEEEETTCCTTSCC-CEEC-C
T ss_pred EEEEEcCCcEEEEECCCC-EEEEEeecC-----CccEEEEEECCCCCEEEEecCC--CeEEEEEeeecCCCCcccchh-h
Confidence 333345567778777332 112222222 2568889999999999877653 233344444222111111111 1
Q ss_pred ccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccC-CcCcccCCccCceEEEE
Q 004149 145 VHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE-DWGETYAGKRQPSLFVI 223 (771)
Q Consensus 145 ~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~g~~~~~~~~~~l~v~ 223 (771)
..+ .+..+.| +++.|+..+.+.... .|+ ..........+........|.+ +....+++.....|.+|
T Consensus 103 ~~~------~i~~~~~--~~~~l~~~~~d~~i~--~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~ 170 (313)
T 3odt_A 103 HQG------NVCSLSF--QDGVVISGSWDKTAK--VWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLW 170 (313)
T ss_dssp CSS------CEEEEEE--ETTEEEEEETTSEEE--EEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred ccc------CEEEEEe--cCCEEEEEeCCCCEE--EEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEE
Confidence 111 1246667 677777766554321 222 0000011111222222334444 44455556667889999
Q ss_pred EccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCC
Q 004149 224 NINSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESS 303 (771)
Q Consensus 224 d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 303 (771)
|.. .....+. ......+..+.|+|+++ ++..+ ....|+++|+
T Consensus 171 d~~-~~~~~~~-~~~~~~i~~~~~~~~~~-----~~~~~---------------~dg~i~i~d~---------------- 212 (313)
T 3odt_A 171 QND-KVIKTFS-GIHNDVVRHLAVVDDGH-----FISCS---------------NDGLIKLVDM---------------- 212 (313)
T ss_dssp ETT-EEEEEEC-SSCSSCEEEEEEEETTE-----EEEEE---------------TTSEEEEEET----------------
T ss_pred ecC-ceEEEEe-ccCcccEEEEEEcCCCe-----EEEcc---------------CCCeEEEEEC----------------
Confidence 932 2233331 22555788999999986 55444 3347889998
Q ss_pred CCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCC
Q 004149 304 SEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDC 382 (771)
Q Consensus 304 ~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (771)
.+++ ...+..+...+....|+||| +|+..+.+ ..|++||+.+++..... ...
T Consensus 213 -~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-----------g~v~iwd~~~~~~~~~~----------~~~---- 265 (313)
T 3odt_A 213 -HTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGED-----------RTVRIWSKENGSLKQVI----------TLP---- 265 (313)
T ss_dssp -TTCCEEEEEECCSSCEEEEEECTTS-CEEEEETT-----------SEEEEECTTTCCEEEEE----------ECS----
T ss_pred -CchhhhhhhhcCCceEEEEEEecCC-CEEEEecC-----------CEEEEEECCCCceeEEE----------ecc----
Confidence 4444 45555667778999999999 46655543 35899998876532211 100
Q ss_pred CcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcE
Q 004149 383 FPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL 425 (771)
Q Consensus 383 f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~ 425 (771)
...+..++|+||++ ++ +...++...+| ++.+++.
T Consensus 266 -----~~~i~~~~~~~~~~-~~-~~~~dg~i~iw--~~~~~~~ 299 (313)
T 3odt_A 266 -----AISIWSVDCMSNGD-II-VGSSDNLVRIF--SQEKSRW 299 (313)
T ss_dssp -----SSCEEEEEECTTSC-EE-EEETTSCEEEE--ESCGGGC
T ss_pred -----CceEEEEEEccCCC-EE-EEeCCCcEEEE--eCCCCce
Confidence 01245678999998 43 34455555555 6656543
No 382
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.92 E-value=4.2e-08 Score=102.27 Aligned_cols=199 Identities=11% Similarity=0.033 Sum_probs=110.8
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCC--CCCeEEEEecCCCCCCeEE
Q 004149 50 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSP--SGSKLLVVRNPENESPIQF 127 (771)
Q Consensus 50 s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SP--dG~~la~~~~~~~~~~~~~ 127 (771)
++||+.|+... ..+.+.+|++.........+. .+......+...+|+| ||+.|+.....+ .-.+|
T Consensus 20 ~~~~~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg--~v~vw 86 (351)
T 3f3f_A 20 DFYGRHVATCS---------SDQHIKVFKLDKDTSNWELSD--SWRAHDSSIVAIDWASPEYGRIIASASYDK--TVKLW 86 (351)
T ss_dssp CSSSSEEEEEE---------TTSEEEEEEECSSSCCEEEEE--EEECCSSCEEEEEECCGGGCSEEEEEETTS--CEEEE
T ss_pred cCCCCEEEEee---------CCCeEEEEECCCCCCcceecc--eeccCCCcEEEEEEcCCCCCCEEEEEcCCC--eEEEE
Confidence 56777766542 335677777754432211111 0111225688999999 699988776543 23333
Q ss_pred EEecCCcc------eEEEecCCcccccccCCCcccceeecCC--CCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCC
Q 004149 128 ELWSQSQL------EKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWK 199 (771)
Q Consensus 128 ~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~wSpD--g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (771)
.+..+... ..+.... ...+ .+..+.|+|+ ++.|+..+.+
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~-~~~~------~v~~~~~~~~~~~~~l~~~~~d-------------------------- 133 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLN-DSKG------SLYSVKFAPAHLGLKLACLGND-------------------------- 133 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEEC-CCSS------CEEEEEECCGGGCSEEEEEETT--------------------------
T ss_pred ecCCCcccccccCcceeeeec-ccCC------ceeEEEEcCCCCCcEEEEecCC--------------------------
Confidence 33322110 2222221 1111 2368999999 9988886432
Q ss_pred CcccccCCcCcccCCccCceEEEEEccCCceeec----------c--CCCCCCccceEEEecC---CCCCccEEEEEeec
Q 004149 200 GQGDWEEDWGETYAGKRQPSLFVININSGEVQAV----------K--GIPKSLSVGQVVWAPL---NEGLHQYLVFVGWS 264 (771)
Q Consensus 200 ~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l----------~--~~~~~~~~~~~~wspD---g~~~~~~l~~~~~~ 264 (771)
..|.+||+.+++.... . .......+..+.|+|+ ++. |+..+.
T Consensus 134 ------------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~----l~~~~~- 190 (351)
T 3f3f_A 134 ------------------GILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEK----LAVSAL- 190 (351)
T ss_dssp ------------------CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCE----EEEEET-
T ss_pred ------------------CcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcE----EEEecC-
Confidence 5788888776653211 0 0123346778899998 664 555541
Q ss_pred CcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc---ceecCCCCccccceeecCCC----CEEEEEecC
Q 004149 265 SETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP---VVNLTESISSAFFPRFSPDG----KFLVFLSAK 337 (771)
Q Consensus 265 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~---~~~lt~~~~~~~~p~~SpDG----~~l~f~~~~ 337 (771)
...+...+. ..+. ...+..+...+....|+|+| +.|+..+.+
T Consensus 191 --------------~~~~~~~~~-----------------~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~d 239 (351)
T 3f3f_A 191 --------------EQAIIYQRG-----------------KDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKD 239 (351)
T ss_dssp --------------TEEEEEEEC-----------------TTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETT
T ss_pred --------------CCcEEEEcc-----------------CCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCC
Confidence 123333332 3333 34455566678899999999 666665544
Q ss_pred CCCCCCCccccccceeeecCCC
Q 004149 338 SSVDSGAHSATDSLHRIDWPTN 359 (771)
Q Consensus 338 ~~~~~g~~~~~~~l~~~d~~~~ 359 (771)
..|.+||+.++
T Consensus 240 -----------g~i~iwd~~~~ 250 (351)
T 3f3f_A 240 -----------GRIRIFKITEK 250 (351)
T ss_dssp -----------SCEEEEEEEEC
T ss_pred -----------CeEEEEeCCCC
Confidence 24777887654
No 383
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=98.92 E-value=4.7e-10 Score=124.61 Aligned_cols=131 Identities=20% Similarity=0.188 Sum_probs=86.6
Q ss_pred cCCCceEEEEEEecCCCC-CCCCCcEEEEEcCCCCCCCCCc-------chHHHHHHH-HCCcEEEEECCCCC-CCCChhh
Q 004149 515 KGAQKPFEAIFVSSSHKK-DCSCDPLIVVLHGGPHSVSLSS-------YSKSLAFLS-SVGYSLLIVNYRGS-LGFGEEA 584 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~-~~~~~p~vv~~HGg~~~~~~~~-------~~~~~~~la-~~G~~V~~~d~rG~-~~~g~~~ 584 (771)
+.|.+.+ .+|.|.... ..++.|+||++|||++...... +......|+ +.|++|+.+|||.. .++....
T Consensus 77 sedcl~l--nv~~P~~~~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~ 154 (579)
T 2bce_A 77 NEDCLYL--NIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTG 154 (579)
T ss_dssp CSCCCEE--EEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCS
T ss_pred CCCCCEE--EEEECCCCCCCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCC
Confidence 4455555 477786432 3467899999999886543221 111123444 45799999999942 1221111
Q ss_pred hhcCCCCccccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHHh--CCCceeEEEecCCc
Q 004149 585 LQSLPGKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPL 650 (771)
Q Consensus 585 ~~~~~~~~~~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~p~ 650 (771)
....+++ ..+.|+.++++|+.++ ...|++||.|+|+|.||.++..++.. ...+|+++|+.++.
T Consensus 155 ~~~~pgn---~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 155 DSNLPGN---YGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp STTCCCC---HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred CCCCCCc---cchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 0111222 2478999999999875 23699999999999999999988764 34689999988874
No 384
>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*
Probab=98.92 E-value=2.7e-09 Score=105.98 Aligned_cols=192 Identities=7% Similarity=-0.011 Sum_probs=109.8
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004149 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
..+.||++||.+.. ...|...+..|. .+|.|+.+|++|. +. .++++.+.++.+ . ..
T Consensus 21 ~~~~l~~~hg~~~~--~~~~~~~~~~l~-~~~~v~~~d~~g~---~~-------------~~~~~~~~i~~~---~--~~ 76 (244)
T 2cb9_A 21 GGKNLFCFPPISGF--GIYFKDLALQLN-HKAAVYGFHFIEE---DS-------------RIEQYVSRITEI---Q--PE 76 (244)
T ss_dssp CSSEEEEECCTTCC--GGGGHHHHHHTT-TTSEEEEECCCCS---TT-------------HHHHHHHHHHHH---C--SS
T ss_pred CCCCEEEECCCCCC--HHHHHHHHHHhC-CCceEEEEcCCCH---HH-------------HHHHHHHHHHHh---C--CC
Confidence 34779999997654 346777777775 6899999999982 11 244555554433 1 13
Q ss_pred CeEEEEEcChhHHHHHHHHHhC---CCceeEEEecCCccchhhhhcCCCCCcchhhhhccCCCCCcCCCCCC-hhhH---
Q 004149 616 SKVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPS-VEDL--- 688 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~---p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--- 688 (771)
+++.|+||||||.+++.++.+. ++.+.++++.++....... ..... .. ....+. .+. ....
T Consensus 77 ~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~~---~~~~~---~~-----~~~~~~-~~~~~~~~~~~ 144 (244)
T 2cb9_A 77 GPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQSI---TADTE---ND-----DSAAYL-PEAVRETVMQK 144 (244)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSCC---CCC---------------CCS-CHHHHHHHTHH
T ss_pred CCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCcccc---ccccc---HH-----HHHHHh-HHHHHHHHHHH
Confidence 5799999999999999998765 5678888887765321000 00000 00 000000 000 0000
Q ss_pred -HHHhhcCc-cccccCCCCcEEEEeeC--CCCccCcHHHHHHHHHHHhC-CCCEEEEEeCCCCcc-CCCCCChHHHHHHH
Q 004149 689 -TRFHSKSP-ISHISKVKTPTIFLLGA--QDLRVPVSNGLQYARALREK-GVETKVIVFPNDVHG-IERPQSDFESFLNI 762 (771)
Q Consensus 689 -~~~~~~sp-~~~~~~i~~P~Lii~G~--~D~~vp~~~~~~~~~~l~~~-g~~~~~~~~~~~~H~-~~~~~~~~~~~~~i 762 (771)
..+..... ......+++|+++++|+ .|.. ++.... .+.+. ..++++..+++ +|. +...+....+...+
T Consensus 145 ~~~~~~~~~~~~~~~~i~~Pvl~i~g~~~~D~~-~~~~~~----~w~~~~~~~~~~~~i~g-gH~~~~~~~~~~~~~~~i 218 (244)
T 2cb9_A 145 KRCYQEYWAQLINEGRIKSNIHFIEAGIQTETS-GAMVLQ----KWQDAAEEGYAEYTGYG-AHKDMLEGEFAEKNANII 218 (244)
T ss_dssp HHHHHHHHHHCCCCSCBSSEEEEEECSBCSCCC-HHHHTT----SSGGGBSSCEEEEECSS-BGGGTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCCcCCCEEEEEccCccccc-cccchh----HHHHhcCCCCEEEEecC-ChHHHcChHHHHHHHHHH
Confidence 00111000 12346788999999999 8873 322222 22221 23588999986 883 32234445667778
Q ss_pred HHHHHHH
Q 004149 763 GLWFKKY 769 (771)
Q Consensus 763 ~~wl~~~ 769 (771)
.+||.+.
T Consensus 219 ~~~L~~~ 225 (244)
T 2cb9_A 219 LNILDKI 225 (244)
T ss_dssp HHHHHTC
T ss_pred HHHHhcC
Confidence 8888643
No 385
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=98.91 E-value=2.8e-09 Score=108.30 Aligned_cols=101 Identities=17% Similarity=0.232 Sum_probs=76.8
Q ss_pred CCcEEEEEcCCCCCCC---CCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCC
Q 004149 536 CDPLIVVLHGGPHSVS---LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 612 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~---~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 612 (771)
..|+||++||.+.... ...|......|+++||.|+++|++| +|.+. ...+++.+.++.+++.
T Consensus 6 ~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g---~g~s~----------~~~~~~~~~i~~~~~~-- 70 (285)
T 1ex9_A 6 TKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQ---LDTSE----------VRGEQLLQQVEEIVAL-- 70 (285)
T ss_dssp CSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCS---SSCHH----------HHHHHHHHHHHHHHHH--
T ss_pred CCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCC---CCCch----------hhHHHHHHHHHHHHHH--
Confidence 4578999999765421 2367778889999999999999998 44332 1245555555555544
Q ss_pred CCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCcc
Q 004149 613 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 613 ~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 651 (771)
.+.+++.|+||||||.++..++.++|+.++++|++++..
T Consensus 71 ~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 71 SGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp HCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred hCCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 235689999999999999999999999999999988853
No 386
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.91 E-value=3.4e-08 Score=104.12 Aligned_cols=238 Identities=13% Similarity=0.077 Sum_probs=125.8
Q ss_pred ceeEEEEEEeecCCCCccceeecCCccccccceEEEeCC-CCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCccc
Q 004149 70 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSP-SGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVH 146 (771)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 146 (771)
..+.+.++++... .....+... ...+...+|+| +|+.|+.....+ .+.+|+ .++............
T Consensus 93 ~dg~i~v~d~~~~-~~~~~~~~~-----~~~i~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~ 161 (366)
T 3k26_A 93 SRGIIRIINPITM-QCIKHYVGH-----GNAINELKFHPRDPNLLLSVSKDH-----ALRLWNIQTDTLVAIFGGVEGHR 161 (366)
T ss_dssp TTCEEEEECTTTC-CEEEEEESC-----CSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTTTEEEEEECSTTSCS
T ss_pred CCCEEEEEEchhc-eEeeeecCC-----CCcEEEEEECCCCCCEEEEEeCCC-----eEEEEEeecCeEEEEeccccccc
Confidence 4457777766432 112222212 25688999999 899888766543 355552 333333331101111
Q ss_pred ccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEcc
Q 004149 147 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ 226 (771)
Q Consensus 147 g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~ 226 (771)
+ .+..+.|+|||+.|+..+.+ ..|.+||+.
T Consensus 162 ~------~v~~~~~~~~~~~l~~~~~d--------------------------------------------g~i~i~d~~ 191 (366)
T 3k26_A 162 D------EVLSADYDLLGEKIMSCGMD--------------------------------------------HSLKLWRIN 191 (366)
T ss_dssp S------CEEEEEECTTSSEEEEEETT--------------------------------------------SCEEEEESC
T ss_pred C------ceeEEEECCCCCEEEEecCC--------------------------------------------CCEEEEECC
Confidence 1 23689999999998886543 456666666
Q ss_pred CCceeecc---------------------------CCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCC
Q 004149 227 SGEVQAVK---------------------------GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRP 279 (771)
Q Consensus 227 ~~~~~~l~---------------------------~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~ 279 (771)
+++..... .......+..+.|+ ++. |+..+ ..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~----l~~~~---------------~d 250 (366)
T 3k26_A 192 SKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDL----ILSKS---------------CE 250 (366)
T ss_dssp SHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTE----EEEEC---------------SS
T ss_pred CCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCE----EEEEe---------------cC
Confidence 54322110 01134456778888 554 55544 23
Q ss_pred ceeEEEecccccchhhhhhhhcCCCC-CCcceecCCCCccccceeecCC--CCEEEEEecCCCCCCCCccccccceeeec
Q 004149 280 CALYAVRVSLYKSEASELELKESSSE-DLPVVNLTESISSAFFPRFSPD--GKFLVFLSAKSSVDSGAHSATDSLHRIDW 356 (771)
Q Consensus 280 ~~l~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~lt~~~~~~~~p~~SpD--G~~l~f~~~~~~~~~g~~~~~~~l~~~d~ 356 (771)
..|.++|+.... ..+........ ......+..+...+....|||| |+.|+..+.+ ..|++||+
T Consensus 251 ~~i~~wd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~d-----------g~i~vwd~ 316 (366)
T 3k26_A 251 NAIVCWKPGKME---DDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV-----------GKLYVWDL 316 (366)
T ss_dssp SEEEEEEESSTT---CCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTT-----------SCEEEEEC
T ss_pred CEEEEEeCCCcc---ccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecC-----------CcEEEEEC
Confidence 467777762110 00000000000 0012333344556788999999 9988877654 35899998
Q ss_pred CCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEE
Q 004149 357 PTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 417 (771)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~ 417 (771)
.+++..... ...+.... ....+..++|+||++.|+ +...++...+|.
T Consensus 317 ~~~~~~~~~------~~~~~~~~-------~~~~v~~~~~s~~~~~l~-s~~~dg~i~iwd 363 (366)
T 3k26_A 317 EVEDPHKAK------CTTLTHHK-------CGAAIRQTSFSRDSSILI-AVCDDASIWRWD 363 (366)
T ss_dssp CSSSGGGCE------EEEECCTT-------CCSCEEEEEECTTSSEEE-EEETTSEEEEEE
T ss_pred CCCCCcccc------ceEEcccc-------cCCceEEEEeCCCCCeEE-EEeCCCEEEEEE
Confidence 876542210 00000000 012355788999998664 555566555553
No 387
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=98.90 E-value=2.8e-09 Score=117.95 Aligned_cols=131 Identities=21% Similarity=0.164 Sum_probs=90.1
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcc-hHHHHHHHH-CCcEEEEECCCCC-CCCChhhhhcCCCC
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY-SKSLAFLSS-VGYSLLIVNYRGS-LGFGEEALQSLPGK 591 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~-~~~~~~la~-~G~~V~~~d~rG~-~~~g~~~~~~~~~~ 591 (771)
+.|.+.+ .+|.|... .++.|+||++|||++....... ......|++ .|++|+.+|||.. -|+.... .....
T Consensus 89 ~edcl~l--nv~~P~~~--~~~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~--~~~~~ 162 (529)
T 1p0i_A 89 SEDCLYL--NVWIPAPK--PKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALP--GNPEA 162 (529)
T ss_dssp CSCCCEE--EEEEESSC--CSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCT--TCTTS
T ss_pred CCcCCeE--EEeeCCCC--CCCCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCC--CCCCC
Confidence 3455555 47788742 2678999999998865543321 122345655 7999999999942 1121110 00112
Q ss_pred ccccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHHhC--CCceeEEEecCCcc
Q 004149 592 VGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLC 651 (771)
Q Consensus 592 ~~~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~p~~ 651 (771)
.+...+.|+.++++|+.++ ...|++||.|+|+|.||.+++.++... ..+|+++|+.+|..
T Consensus 163 ~~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 163 PGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred cCcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 2333488999999999886 247999999999999999999888753 45899999999865
No 388
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=98.90 E-value=9.6e-10 Score=118.63 Aligned_cols=112 Identities=9% Similarity=-0.009 Sum_probs=80.7
Q ss_pred CCCcEEEEEcCCCCCCCCCcchH-HHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCC
Q 004149 535 SCDPLIVVLHGGPHSVSLSSYSK-SLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 612 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~-~~~~la~-~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 612 (771)
...|+||++||.+... ...|.. .+..|.+ .||.|+++|+||.+... ....... .....+|+.+.+++|.++..
T Consensus 68 ~~~p~vvliHG~~~~~-~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~---~~~~~~~-~~~~~~dl~~li~~L~~~~g 142 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKG-EDGWLLDMCKKMFQVEKVNCICVDWRRGSRTE---YTQASYN-TRVVGAEIAFLVQVLSTEMG 142 (452)
T ss_dssp TTSEEEEEECCSCCTT-CTTHHHHHHHHHHTTCCEEEEEEECHHHHSSC---HHHHHHH-HHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEECCCCCCC-CchHHHHHHHHHHhhCCCEEEEEechhcccCc---hhHhHhh-HHHHHHHHHHHHHHHHHhcC
Confidence 4568999999977653 245666 4566665 49999999999843322 1100000 01225677788888865434
Q ss_pred CCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCcc
Q 004149 613 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 613 ~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 651 (771)
++.+++.|+|||+||.+|+.++.++|++++++++.+|..
T Consensus 143 ~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 143 YSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 567899999999999999999999999999999988764
No 389
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.89 E-value=7.6e-08 Score=112.36 Aligned_cols=241 Identities=11% Similarity=0.077 Sum_probs=142.1
Q ss_pred EEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCcc-ceeecCCccccccceEEEeCCC--CCeEEEEecCCC
Q 004149 45 TFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSV-TFQWAPFPVEMTGASAVVPSPS--GSKLLVVRNPEN 121 (771)
Q Consensus 45 ~~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lt~~~~~~~~~~~~~~~~SPd--G~~la~~~~~~~ 121 (771)
..-..++||+.++... ..+.+.+|++........ .+.. ..+.+...+|||+ |+.|+..+..+
T Consensus 13 ~~l~~s~dg~~latg~---------~dg~I~vwd~~~~~~~~~~~l~~-----h~~~V~~l~~s~~~~~~~l~s~s~Dg- 77 (753)
T 3jro_A 13 HDAVLDYYGKRLATCS---------SDKTIKIFEVEGETHKLIDTLTG-----HEGPVWRVDWAHPKFGTILASCSYDG- 77 (753)
T ss_dssp EEECCCSSSCCEEEEE---------TTTEEEEEEEETTEEEEEEEECC-----CSSCEEEEEECCTTSCSEEEEEETTS-
T ss_pred EEEEECCCCCeEEEEE---------CCCcEEEEecCCCCCccceeccC-----CcCceEEEEecCCCCCCEEEEEeCCC-
Confidence 3344577888777653 234666666643222111 1211 2256889999998 99998776543
Q ss_pred CCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCC--CCeEEEEecCCCCCCCCccCCCCCCCCCCccCCC
Q 004149 122 ESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNS 197 (771)
Q Consensus 122 ~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpD--g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (771)
.+.+| ..+....+.... ...+ .+.++.|+|+ |+.|+..+.
T Consensus 78 ----~I~vwd~~~~~~~~~~~~~-~h~~------~V~~v~~sp~~~~~~l~sgs~------------------------- 121 (753)
T 3jro_A 78 ----KVLIWKEENGRWSQIAVHA-VHSA------SVNSVQWAPHEYGPLLLVASS------------------------- 121 (753)
T ss_dssp ----CEEEEEEETTEEEEEEEEC-CCSS------CEEEEEECCGGGCSEEEEEET-------------------------
T ss_pred ----eEEEEECCCCccccccccc-CCCC------CeEEEEECCCCCCCEEEEEeC-------------------------
Confidence 34444 233322222221 1111 2368999999 888888643
Q ss_pred CCCcccccCCcCcccCCccCceEEEEEccCCc---eeeccCCCCCCccceEEEec-------------CCCCCccEEEEE
Q 004149 198 WKGQGDWEEDWGETYAGKRQPSLFVININSGE---VQAVKGIPKSLSVGQVVWAP-------------LNEGLHQYLVFV 261 (771)
Q Consensus 198 ~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~---~~~l~~~~~~~~~~~~~wsp-------------Dg~~~~~~l~~~ 261 (771)
...|.+||+.++. ...+ ......+..+.|+| ||+. |+..
T Consensus 122 -------------------dg~I~vwdl~~~~~~~~~~~--~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~----l~sg 176 (753)
T 3jro_A 122 -------------------DGKVSVVEFKENGTTSPIII--DAHAIGVNSASWAPATIEEDGEHNGTKESRK----FVTG 176 (753)
T ss_dssp -------------------TSEEEEEECCSSSCCCCEEE--ECCSSCEEEEEECCCC---------CGGGCC----EEEE
T ss_pred -------------------CCcEEEEEeecCCCcceeEe--ecCCCceEEEEecCcccccccccccCCCCCE----EEEE
Confidence 3578999988763 2223 23445678899999 5776 7766
Q ss_pred eecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC-----cceecCCCCccccceeecCC---CCEEEE
Q 004149 262 GWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-----PVVNLTESISSAFFPRFSPD---GKFLVF 333 (771)
Q Consensus 262 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-----~~~~lt~~~~~~~~p~~SpD---G~~l~f 333 (771)
+ .+..|.++|+ .++ ....+..+...+....|+|| |+.|+.
T Consensus 177 s---------------~dg~I~iwd~-----------------~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s 224 (753)
T 3jro_A 177 G---------------ADNLVKIWKY-----------------NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS 224 (753)
T ss_dssp E---------------TTSCEEEEEE-----------------ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred E---------------CCCeEEEEec-----------------cCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEE
Confidence 5 2335777776 222 12345566777899999999 888877
Q ss_pred EecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCee
Q 004149 334 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 413 (771)
Q Consensus 334 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 413 (771)
.+.+. .|.+||+.++......... . ... +...+..++|+|||+.|+ +...++..
T Consensus 225 ~s~Dg-----------~I~iwd~~~~~~~~~~~~~-------~---~~~----~~~~v~~l~~spdg~~l~-s~s~Dg~I 278 (753)
T 3jro_A 225 VSQDR-----------TCIIWTQDNEQGPWKKTLL-------K---EEK----FPDVLWRASWSLSGNVLA-LSGGDNKV 278 (753)
T ss_dssp EESSS-----------CEEEEEESSSSSCCBCCBS-------S---SSC----CSSCCCCEEECTTTCCEE-EECSSSCE
T ss_pred EecCC-----------EEEEecCCCCCCcceeEEe-------c---cCC----CCCceEEEEEcCCCCEEE-EEcCCCEE
Confidence 66553 4888888775432110000 0 000 112456789999998664 44456665
Q ss_pred EEEEEE
Q 004149 414 VIISVN 419 (771)
Q Consensus 414 ~l~~~d 419 (771)
.+|.++
T Consensus 279 ~vwd~~ 284 (753)
T 3jro_A 279 TLWKEN 284 (753)
T ss_dssp ECCBCC
T ss_pred EEEecC
Confidence 666443
No 390
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=98.89 E-value=3e-09 Score=117.65 Aligned_cols=131 Identities=21% Similarity=0.166 Sum_probs=90.5
Q ss_pred cCCCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcc-hHHHHHHH-HCCcEEEEECCCCC-CCCChhhhhcCCCC
Q 004149 515 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY-SKSLAFLS-SVGYSLLIVNYRGS-LGFGEEALQSLPGK 591 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~-~~~~~~la-~~G~~V~~~d~rG~-~~~g~~~~~~~~~~ 591 (771)
+.|.+.+ .+|.|... .++.|+||++|||++....... ......|+ +.|++|+.+|||.. -|+.... .....
T Consensus 91 sedcl~l--nv~~P~~~--~~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~--~~~~~ 164 (537)
T 1ea5_A 91 SEDCLYL--NIWVPSPR--PKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALH--GSQEA 164 (537)
T ss_dssp CSCCCEE--EEEECSSC--CSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCT--TCSSS
T ss_pred CCcCCeE--EEeccCCC--CCCCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCC--CCCCC
Confidence 4456555 46778742 3678999999998876543321 12234555 78999999999942 1121110 00112
Q ss_pred ccccchhhHHHHHHHHHHcC---CCCCCeEEEEEcChhHHHHHHHHHh--CCCceeEEEecCCcc
Q 004149 592 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPLC 651 (771)
Q Consensus 592 ~~~~~~~D~~~~i~~l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~p~~ 651 (771)
.+...+.|+.++++|+.++. ..|++||.|+|+|.||.++..++.. ...+|+++|+.+|..
T Consensus 165 ~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 165 PGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp CSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred cCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 23345899999999998862 3699999999999999999988764 245899999999864
No 391
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.89 E-value=1.7e-07 Score=100.26 Aligned_cols=227 Identities=13% Similarity=0.062 Sum_probs=126.6
Q ss_pred ccceEEEeCC-CCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCC----cccccccCCCcccceeecC-CCCeEEEE
Q 004149 99 TGASAVVPSP-SGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQ----TVHGSVYADGWFEGISWNS-DETLIAYV 170 (771)
Q Consensus 99 ~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~wSp-Dg~~la~~ 170 (771)
+.+...+||| ||++||.....+ .+.+| ..+.......... ...-.....+.+..+.|+| +++.|+..
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDG-----VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTS-----CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred CcEEEEEEecCCCCEEEEEcCCC-----eEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 5688999999 999998776543 34444 2222211111000 0000000112336899999 66666664
Q ss_pred ecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecC
Q 004149 171 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPL 250 (771)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspD 250 (771)
+. ...|.+||+.+++.... ......+....|+|+
T Consensus 119 ~~--------------------------------------------d~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~ 152 (408)
T 4a11_B 119 SF--------------------------------------------DKTLKVWDTNTLQTADV--FNFEETVYSHHMSPV 152 (408)
T ss_dssp ET--------------------------------------------TSEEEEEETTTTEEEEE--EECSSCEEEEEECSS
T ss_pred eC--------------------------------------------CCeEEEeeCCCCcccee--ccCCCceeeeEeecC
Confidence 32 36899999999887666 344455678889986
Q ss_pred CCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC-cceecCCCCccccceeecCCCC
Q 004149 251 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTESISSAFFPRFSPDGK 329 (771)
Q Consensus 251 g~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~lt~~~~~~~~p~~SpDG~ 329 (771)
+.. ...|+..+ ....|+++|+ .++ ....+..+...+....|+|+|+
T Consensus 153 ~~~-~~~~~~~~---------------~~~~v~~~d~-----------------~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (408)
T 4a11_B 153 STK-HCLVAVGT---------------RGPKVQLCDL-----------------KSGSCSHILQGHRQEILAVSWSPRYD 199 (408)
T ss_dssp CSS-CCEEEEEE---------------SSSSEEEEES-----------------SSSCCCEEECCCCSCEEEEEECSSCT
T ss_pred CCC-CcEEEEEc---------------CCCeEEEEeC-----------------CCcceeeeecCCCCcEEEEEECCCCC
Confidence 542 11154443 3347888898 444 3556666777889999999999
Q ss_pred EEEEEecCCCCCCCCccccccceeeecCCCCCCCCccce--eeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEe
Q 004149 330 FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKI--VDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 407 (771)
Q Consensus 330 ~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~ 407 (771)
++++....+ ..|.+||+.++......... ....... ...+. .....+..++|+|||+.|+. .
T Consensus 200 ~ll~~~~~d----------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~v~~~~~~~~~~~l~~-~ 263 (408)
T 4a11_B 200 YILATASAD----------SRVKLWDVRRASGCLITLDQHNGKKSQAV----ESANT-AHNGKVNGLCFTSDGLHLLT-V 263 (408)
T ss_dssp TEEEEEETT----------SCEEEEETTCSSCCSEECCTTTTCSCCCT----TTSSC-SCSSCEEEEEECTTSSEEEE-E
T ss_pred cEEEEEcCC----------CcEEEEECCCCCcccccccccccccceee----ccccc-cccCceeEEEEcCCCCEEEE-e
Confidence 754444332 35888888765421110000 0000000 00000 01123456789999987654 4
Q ss_pred eeCCeeEEEEEECCCCcEEE
Q 004149 408 IWGSSQVIISVNVSSGELLR 427 (771)
Q Consensus 408 ~~~~~~~l~~~d~~tg~~~~ 427 (771)
..++. |..+|+.+++...
T Consensus 264 ~~dg~--i~vwd~~~~~~~~ 281 (408)
T 4a11_B 264 GTDNR--MRLWNSSNGENTL 281 (408)
T ss_dssp ETTSC--EEEEETTTCCBCC
T ss_pred cCCCe--EEEEECCCCccce
Confidence 44444 5555777776543
No 392
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=98.87 E-value=5.9e-09 Score=107.23 Aligned_cols=105 Identities=19% Similarity=0.261 Sum_probs=78.3
Q ss_pred CCCcEEEEEcCCCCCCCC----CcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHc
Q 004149 535 SCDPLIVVLHGGPHSVSL----SSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDM 610 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~----~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~ 610 (771)
+..|+||++||....... ..|....+.|+++||.|+++|++|.+.... + ....+++.+.++.+++.
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~------~----~~~~~~l~~~i~~~l~~ 75 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDG------P----NGRGEQLLAYVKTVLAA 75 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSS------T----TSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCC------C----CCCHHHHHHHHHHHHHH
Confidence 345789999997654311 457778899999999999999998443211 0 12345566666555554
Q ss_pred CCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCcc
Q 004149 611 GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 611 ~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 651 (771)
.+.+++.|+||||||.++..++.++|++++++|++++..
T Consensus 76 --~~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 76 --TGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp --HCCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred --hCCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 245789999999999999999999999999999988754
No 393
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.87 E-value=3e-08 Score=104.52 Aligned_cols=251 Identities=10% Similarity=0.005 Sum_probs=131.2
Q ss_pred eeEEEEEEeecCCCCc-cceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccc
Q 004149 71 KKFMLSTVISKENENS-VTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHG 147 (771)
Q Consensus 71 ~~~~~~~~~~~~~~~~-~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g 147 (771)
.+.+.+|++...+... ..+... ...+...+|||||++|+.....+ .+.+| ..+....+......+
T Consensus 63 dg~i~iw~~~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~~~v-- 130 (368)
T 3mmy_A 63 ANDVRCWEVQDSGQTIPKAQQMH-----TGPVLDVCWSDDGSKVFTASCDK-----TAKMWDLSSNQAIQIAQHDAPV-- 130 (368)
T ss_dssp TSEEEEEEECTTSCEEEEEEEEC-----SSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEECSSCE--
T ss_pred CCcEEEEEcCCCCceeEEEeccc-----cCCEEEEEECcCCCEEEEEcCCC-----cEEEEEcCCCCceeeccccCce--
Confidence 4567777775433222 222222 25688999999999998776543 55666 333433333322222
Q ss_pred cccCCCcccceee--cCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEc
Q 004149 148 SVYADGWFEGISW--NSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI 225 (771)
Q Consensus 148 ~~~~~~~~~~~~w--SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~ 225 (771)
..+.| +|||+.|+..+.+.... .|+............. . ............+.......+.+|++
T Consensus 131 --------~~~~~~~~~~~~~l~~~~~dg~i~--vwd~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~i~~~~~ 197 (368)
T 3mmy_A 131 --------KTIHWIKAPNYSCVMTGSWDKTLK--FWDTRSSNPMMVLQLP-E--RCYCADVIYPMAVVATAERGLIVYQL 197 (368)
T ss_dssp --------EEEEEEECSSCEEEEEEETTSEEE--EECSSCSSCSEEEECS-S--CEEEEEEETTEEEEEEGGGCEEEEEC
T ss_pred --------EEEEEEeCCCCCEEEEccCCCcEE--EEECCCCcEEEEEecC-C--CceEEEecCCeeEEEeCCCcEEEEEe
Confidence 68899 99999888877655322 2322111111100000 0 00111111123334445677888888
Q ss_pred cCCceeecc-CCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCC
Q 004149 226 NSGEVQAVK-GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSS 304 (771)
Q Consensus 226 ~~~~~~~l~-~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 304 (771)
......... ............+.+++......++..+ .+..|.++++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~dg~i~i~~~----------------- 245 (368)
T 3mmy_A 198 ENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS---------------IEGRVAIHYI----------------- 245 (368)
T ss_dssp SSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEE---------------TTSEEEEEES-----------------
T ss_pred ccccchhhhccccccCCCceEEEcccCCCCCCeEEEec---------------CCCcEEEEec-----------------
Confidence 765432221 1122223444555555542111122222 3346777776
Q ss_pred CCCc----ceecCCCCc------------cccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccce
Q 004149 305 EDLP----VVNLTESIS------------SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKI 368 (771)
Q Consensus 305 ~~~~----~~~lt~~~~------------~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~ 368 (771)
.... ...+..+.. .+....|||||+.|+..+.+. .|.+||+.+++.......
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~- 313 (368)
T 3mmy_A 246 NPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDG-----------RFSFWDKDARTKLKTSEQ- 313 (368)
T ss_dssp SCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTS-----------CEEEEETTTTEEEEECCC-
T ss_pred CCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCC-----------eEEEEECCCCcEEEEecC-
Confidence 2221 122222221 478899999999988777553 489999887553211110
Q ss_pred eeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEee
Q 004149 369 VDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 408 (771)
Q Consensus 369 ~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~ 408 (771)
+...+..++|+|||+.|+..+.
T Consensus 314 ------------------~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 314 ------------------LDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp ------------------CSSCEEEEEECTTSSCEEEEEC
T ss_pred ------------------CCCCceEEEECCCCCeEEEEec
Confidence 0113457889999998776654
No 394
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=98.87 E-value=1.6e-09 Score=116.87 Aligned_cols=112 Identities=13% Similarity=0.072 Sum_probs=79.9
Q ss_pred CCCcEEEEEcCCCCCCCCCcchH-HHHHHHHC-CcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCC
Q 004149 535 SCDPLIVVLHGGPHSVSLSSYSK-SLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 612 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~-~~~~la~~-G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 612 (771)
...|+||++||.+... ...|.. .+..|.++ ||.|+++|+||.+... ..... .......+|+.+.++++.++..
T Consensus 68 ~~~p~vvliHG~~~~~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~---~~~~~-~~~~~~~~dl~~~i~~L~~~~g 142 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRG-EDSWPSDMCKKILQVETTNCISVDWSSGAKAE---YTQAV-QNIRIVGAETAYLIQQLLTELS 142 (452)
T ss_dssp TTSCEEEEECCTTCCS-SSSHHHHHHHHHHTTSCCEEEEEECHHHHTSC---HHHHH-HHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEcCCCCCC-CchHHHHHHHHHHhhCCCEEEEEecccccccc---cHHHH-HhHHHHHHHHHHHHHHHHHhcC
Confidence 4468999999976553 235655 56677654 9999999999843321 11000 0001124677777888865433
Q ss_pred CCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCcc
Q 004149 613 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 613 ~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 651 (771)
++.+++.|+|||+||.+|+.++.++|++++++++.+|..
T Consensus 143 ~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 143 YNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 557899999999999999999999999999999988764
No 395
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.86 E-value=1.7e-07 Score=97.51 Aligned_cols=199 Identities=12% Similarity=0.059 Sum_probs=114.5
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCc-ccccccCCCcccceeecCCCCeEEEEecCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQT-VHGSVYADGWFEGISWNSDETLIAYVAEEPS 175 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~ 175 (771)
+.+....|||+ .||..+... .+.+|+ .+....+..+... ..+. +.+++|||||+.|+..+.+
T Consensus 15 ~~v~~~~~s~~--~las~~~D~-----~i~lw~~~~~~~~~~~~~~~~~h~~~------v~~v~~sp~~~~las~s~D-- 79 (330)
T 2hes_X 15 EKIWSFDFSQG--ILATGSTDR-----KIKLVSVKYDDFTLIDVLDETAHKKA------IRSVAWRPHTSLLAAGSFD-- 79 (330)
T ss_dssp SCEEEEEEETT--EEEEEESSS-----CEEEEECSSSCCEEEEEECTTCCCSC------EEEEEECTTSSEEEEEETT--
T ss_pred CceeeeccCCC--EEEEEcCCC-----EEEEEEecCCCeEEEEEEecCCccCC------EEEEEECCCCCEEEEEeCC--
Confidence 45778899998 666554432 344552 2222222222112 1122 3689999999988886543
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCC-------c-eeeccCCCCCCccceEEE
Q 004149 176 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG-------E-VQAVKGIPKSLSVGQVVW 247 (771)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~-------~-~~~l~~~~~~~~~~~~~w 247 (771)
..|.+||+..+ + ...+ ......+..++|
T Consensus 80 ------------------------------------------~~v~iw~~~~~~~~~~~~~~~~~~--~~h~~~V~~v~~ 115 (330)
T 2hes_X 80 ------------------------------------------STVSIWAKEESADRTFEMDLLAII--EGHENEVKGVAW 115 (330)
T ss_dssp ------------------------------------------SCEEEEEC-------CCCEEEEEE--C----CEEEEEE
T ss_pred ------------------------------------------CcEEEEEcccCcCccccceeEEEE--cCCCCcEEEEEE
Confidence 45777776432 1 1223 233446788999
Q ss_pred ecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC---c-ceecCCCCcccccee
Q 004149 248 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL---P-VVNLTESISSAFFPR 323 (771)
Q Consensus 248 spDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~---~-~~~lt~~~~~~~~p~ 323 (771)
+|||+. |+..+ .+..|.++|+. .++ + ...+..+...+....
T Consensus 116 sp~g~~----las~s---------------~D~~v~iwd~~----------------~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 116 SNDGYY----LATCS---------------RDKSVWIWETD----------------ESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp CTTSCE----EEEEE---------------TTSCEEEEECC----------------TTCCCCEEEEEECCCSSCEEEEE
T ss_pred CCCCCE----EEEEe---------------CCCEEEEEecc----------------CCCCCeEEEEEeccCCCceEEEE
Confidence 999997 77665 23367777762 111 1 234566677789999
Q ss_pred ecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCC-E
Q 004149 324 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC-T 402 (771)
Q Consensus 324 ~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~-~ 402 (771)
|+|||+.|+..+.+. .|.+||..++.... ...+.. +...+..+.|+|++. .
T Consensus 161 ~~p~~~~l~s~s~D~-----------~i~iW~~~~~~~~~--------~~~~~~---------h~~~v~~~~~~~~~~~~ 212 (330)
T 2hes_X 161 WHPSEALLASSSYDD-----------TVRIWKDYDDDWEC--------VAVLNG---------HEGTVWSSDFDKTEGVF 212 (330)
T ss_dssp ECSSSSEEEEEETTS-----------CEEEEEEETTEEEE--------EEEECC---------CSSCEEEEEECCSSSSC
T ss_pred ECCCCCEEEEEcCCC-----------eEEEEECCCCCeeE--------EEEccC---------CCCcEEEEEecCCCCee
Confidence 999999988777653 47777765432111 111100 011234567999832 3
Q ss_pred EEEEeeeCCeeEEEEEE
Q 004149 403 MLLSSIWGSSQVIISVN 419 (771)
Q Consensus 403 l~~~~~~~~~~~l~~~d 419 (771)
++++...++...||.+.
T Consensus 213 ~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 213 RLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp EEEEEETTSCEEEEEEE
T ss_pred EEEEEeCCCeEEEEEec
Confidence 45666778888888765
No 396
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.86 E-value=2e-07 Score=101.25 Aligned_cols=261 Identities=10% Similarity=0.038 Sum_probs=135.6
Q ss_pred hhcccceeEEEEEEeec---CCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEE
Q 004149 65 LLANKRKKFMLSTVISK---ENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEF 139 (771)
Q Consensus 65 ~~~~~~~~~~~~~~~~~---~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~ 139 (771)
+......+.+.+|++.. .......++.. ....+...+|+|+|+.|+..... +.-.+|.+. ..+...+..
T Consensus 79 l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~s~s~d--g~i~vwd~~~~~~~~~~~~~ 152 (437)
T 3gre_A 79 LITGSDQGVIKIWNLKEIIVGEVYSSSLTYD----CSSTVTQITMIPNFDAFAVSSKD--GQIIVLKVNHYQQESEVKFL 152 (437)
T ss_dssp EEEEETTSEEEEEEHHHHHTTCCCSCSEEEE----CSSCEEEEEECTTSSEEEEEETT--SEEEEEEEEEEEETTEEEEE
T ss_pred EEEecCCceEEEeECcccccCcccceeeecc----CCCCEEEEEEeCCCCEEEEEeCC--CEEEEEEeccccCCceeecc
Confidence 33344556778877754 21111122211 12568899999999999876654 333344443 133322222
Q ss_pred ecCCccccccc----CCCccccee--ecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccC
Q 004149 140 HVPQTVHGSVY----ADGWFEGIS--WNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYA 213 (771)
Q Consensus 140 ~~~~~~~g~~~----~~~~~~~~~--wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~ 213 (771)
... .+....+ .++....+. |+||++.|+..+
T Consensus 153 ~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------------------------------------ 189 (437)
T 3gre_A 153 NCE-CIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT------------------------------------------ 189 (437)
T ss_dssp EEE-EEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE------------------------------------------
T ss_pred ccc-eeEEEEccCcccccCceEEEEEEcCCCCEEEEEe------------------------------------------
Confidence 111 1100000 011112333 667787776653
Q ss_pred CccCceEEEEEccCCceeec-cCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccc
Q 004149 214 GKRQPSLFVININSGEVQAV-KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKS 292 (771)
Q Consensus 214 ~~~~~~l~v~d~~~~~~~~l-~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 292 (771)
....|.+||+.+++.... .+.+....+..++|+|||+. |+..+ .+..|.++|+
T Consensus 190 --~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~----l~s~~---------------~dg~i~iwd~----- 243 (437)
T 3gre_A 190 --NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCV----LILGT---------------TRGIIDIWDI----- 243 (437)
T ss_dssp --TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCE----EEEEE---------------TTSCEEEEET-----
T ss_pred --CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCE----EEEEc---------------CCCeEEEEEc-----
Confidence 236899999988876444 21113457889999999986 66655 3346888887
Q ss_pred hhhhhhhhcCCCCCCcc-eecC-CCCccccce----eecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCcc
Q 004149 293 EASELELKESSSEDLPV-VNLT-ESISSAFFP----RFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE 366 (771)
Q Consensus 293 ~~~~~~~~~~~~~~~~~-~~lt-~~~~~~~~p----~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~ 366 (771)
..++. ..+. .+...+... .|+|||+.|+..+.+ ..|.+||+.+++......
T Consensus 244 ------------~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 244 ------------RFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK-----------TFLTIWNFVKGHCQYAFI 300 (437)
T ss_dssp ------------TTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTT-----------EEEEEEETTTTEEEEEEE
T ss_pred ------------CCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCC-----------CcEEEEEcCCCcEEEEEE
Confidence 44443 3332 334445555 777888877765544 358899988765322111
Q ss_pred ceeeEEecccc-cC-----CCCCcc-cccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEE
Q 004149 367 KIVDVIPVVQC-AE-----GDCFPG-LYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLR 427 (771)
Q Consensus 367 ~~~~~~~~~~~-~~-----~~~f~g-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~ 427 (771)
.....+..... +. +..+.| .+...+..++|+ +++ ++++...++. |..+|+.+++...
T Consensus 301 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~-~l~s~~~d~~--i~~wd~~~~~~~~ 364 (437)
T 3gre_A 301 NSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK-ILLTDEATSS--IVMFSLNELSSSK 364 (437)
T ss_dssp SSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE-EEEEEGGGTE--EEEEETTCGGGCE
T ss_pred cCCCCCccceecccccccccceecccccCCceEEEEEC-Cce-EEEecCCCCe--EEEEECCCcccce
Confidence 11000000000 00 001111 122235677888 665 5566655554 5555777776443
No 397
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.86 E-value=1.1e-06 Score=90.46 Aligned_cols=244 Identities=14% Similarity=0.086 Sum_probs=146.5
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004149 101 ASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
....+|||++ .||...+. .+.+| ..++..++...... .+ .+.+++|+|||+.|+..+.
T Consensus 28 ~~~l~WS~~~-~lAvg~D~------tV~iWd~~tg~~~~~~~~~~~-~~------~V~~v~~~~~~~~l~sgs~------ 87 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVALDN------SVYLWSASSGDILQLLQMEQP-GE------YISSVAWIKEGNYLAVGTS------ 87 (318)
T ss_dssp CBCEEECTTS-EEEEEETT------EEEEEETTTCCEEEEEECCST-TC------CEEEEEECTTSSEEEEEET------
T ss_pred ceEEEECCCC-EEEEEeCC------EEEEEECCCCCEEEEEEecCC-CC------eEEEEEECCCCCEEEEEEC------
Confidence 3568999987 67764422 35667 35555555543221 11 2368999999999987643
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEE
Q 004149 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 258 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l 258 (771)
+..|.+||+.+++.... .... ......++++++. +
T Consensus 88 --------------------------------------Dg~v~iw~~~~~~~~~~--~~~h-~~~~~~~~~~~~~----l 122 (318)
T 4ggc_A 88 --------------------------------------SAEVQLWDVQQQKRLRN--MTSH-SARVGSLSWNSYI----L 122 (318)
T ss_dssp --------------------------------------TSEEEEEETTTTEEEEE--EECC-SSCEEEEEEETTE----E
T ss_pred --------------------------------------CCcEEEeecCCceeEEE--ecCc-cceEEEeecCCCE----E
Confidence 35789999999876554 2221 2233467777775 5
Q ss_pred EEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCC
Q 004149 259 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 338 (771)
Q Consensus 259 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~ 338 (771)
+..+ ....+..++... .......+..+........|+++|+.|+..+.+.
T Consensus 123 ~s~~---------------~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 172 (318)
T 4ggc_A 123 SSGS---------------RSGHIHHHDVRV---------------AEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN 172 (318)
T ss_dssp EEEE---------------TTSEEEEEETTS---------------SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEe---------------cCCceEeeecCC---------------CceeEEEEcCccCceEEEEEcCCCCEEEEEecCc
Confidence 5444 222455555410 1122344555666788899999999988766553
Q ss_pred CCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEE
Q 004149 339 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 418 (771)
Q Consensus 339 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~ 418 (771)
.|.+||+.+++.......... . ....+....|++++..++..........+..+
T Consensus 173 -----------~i~iwd~~~~~~~~~~~~~~~-----------~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lw 226 (318)
T 4ggc_A 173 -----------LVNVWPSAPGEGGWVPLQTFT-----------Q----HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIW 226 (318)
T ss_dssp -----------CEEEEESSCBTTBSCCSEEEC-----------C----CCSCEEEEEECTTSTTEEEEEECTTTCEEEEE
T ss_pred -----------ceeEEECCCCcccccceeeec-----------c----cCCceEEEEecCCCCcEEEEEecCCCCEEEEE
Confidence 488889887654322111100 0 00123456688888777766554444456666
Q ss_pred ECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004149 419 NVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 419 d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~ 467 (771)
+..++................++++++.+++.....+ ..|++.++.+
T Consensus 227 d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d--~~i~iwd~~~ 273 (318)
T 4ggc_A 227 NVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQ--NQLVIWKYPT 273 (318)
T ss_dssp ETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTT--CCEEEEETTT
T ss_pred ecccccccccccceeeeeeeeecccccceEEEEEcCC--CEEEEEECCC
Confidence 8877776666555555666788999998877654333 3466656543
No 398
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=98.86 E-value=6.4e-09 Score=107.33 Aligned_cols=121 Identities=18% Similarity=0.147 Sum_probs=85.5
Q ss_pred EEEEEecCCCCCCCCCcEEEEEcCCCCCC--------CCCcc----hHHHHHHHHCCcE---EEEECCCCCCCCChhhhh
Q 004149 522 EAIFVSSSHKKDCSCDPLIVVLHGGPHSV--------SLSSY----SKSLAFLSSVGYS---LLIVNYRGSLGFGEEALQ 586 (771)
Q Consensus 522 ~~~~~~P~~~~~~~~~p~vv~~HGg~~~~--------~~~~~----~~~~~~la~~G~~---V~~~d~rG~~~~g~~~~~ 586 (771)
.+....|. .. ..+.||++||..... ....| ...+..|.++||. |+++|++| +|.+...
T Consensus 29 gG~~~~p~---~~-~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g---~G~S~~~ 101 (342)
T 2x5x_A 29 GGFGGGSC---TA-TKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLS---SSEQGSA 101 (342)
T ss_dssp CEEECCSS---CC-CSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSC---HHHHTCG
T ss_pred CcccCCCC---CC-CCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCC---CCccCCc
Confidence 44555554 22 334589999976532 13356 6788899999998 99999998 4443211
Q ss_pred cCCCCccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhC--CCceeEEEecCCccc
Q 004149 587 SLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCN 652 (771)
Q Consensus 587 ~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~p~~~ 652 (771)
.. ........+++.+.++.+.+.. +.+++.|+||||||.++..++.++ |++++++|+++|...
T Consensus 102 ~~-~~~~~~~~~~l~~~I~~l~~~~--g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 102 QY-NYHSSTKYAIIKTFIDKVKAYT--GKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp GG-CCBCHHHHHHHHHHHHHHHHHH--TCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTT
T ss_pred cc-cCCHHHHHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCcc
Confidence 10 0112234678888888887653 347899999999999999999988 889999999988654
No 399
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.84 E-value=2.5e-07 Score=97.61 Aligned_cols=99 Identities=14% Similarity=0.053 Sum_probs=58.2
Q ss_pred ceeecCCCCEEEEEecCCCCCCCCcc-ccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccC
Q 004149 321 FPRFSPDGKFLVFLSAKSSVDSGAHS-ATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD 399 (771)
Q Consensus 321 ~p~~SpDG~~l~f~~~~~~~~~g~~~-~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~d 399 (771)
..+|+|||++++.....+.. .|.+. ....|+++|+++++.. ..+... . ...++|+||
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~-~~~~~~~~~~v~viD~~t~~~v----------~~i~~~----------~-p~~ia~spd 315 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGK-EGTHKFPAAEIWVMDTKTKQRV----------ARIPGR----------D-ALSMTIDQQ 315 (361)
T ss_dssp CEEEETTTTEEEEEEESSCC-TTCTTCCCSEEEEEETTTTEEE----------EEEECT----------T-CCEEEEETT
T ss_pred EEEEecCCCeEEEEEccCCC-cccccCCCceEEEEECCCCcEE----------EEEecC----------C-eeEEEECCC
Confidence 36899999987655431100 01111 1357999998876531 111110 1 346789999
Q ss_pred CCEEEEEeeeCCeeEEEEEECCCC--cEEEe-cCCCCCceeeEEeecCC
Q 004149 400 GCTMLLSSIWGSSQVIISVNVSSG--ELLRI-TPAESNFSWSLLTLDGD 445 (771)
Q Consensus 400 g~~l~~~~~~~~~~~l~~~d~~tg--~~~~l-~~~~~~~~~~~~s~d~~ 445 (771)
|++||.+ +. ..|..+|++++ ++... ...........++|+|+
T Consensus 316 g~~l~v~-n~---~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 316 RNLMLTL-DG---GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TTEEEEE-CS---SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCEEEEe-CC---CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 9977644 33 55777799999 65443 23333345567888876
No 400
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.84 E-value=5.5e-07 Score=95.11 Aligned_cols=84 Identities=10% Similarity=0.063 Sum_probs=52.5
Q ss_pred eeecCCCCEEEEEecCCCCCCCCcc-ccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCC
Q 004149 322 PRFSPDGKFLVFLSAKSSVDSGAHS-ATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDG 400 (771)
Q Consensus 322 p~~SpDG~~l~f~~~~~~~~~g~~~-~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg 400 (771)
..++|||++|+....... .+.|. ....|+++|+++++.. ..+... .....+.|+|||
T Consensus 272 ~~~s~d~~~lyV~~~~~~--~~~~~~~~~~V~VID~~t~~vv----------~~i~~g----------~~p~~i~~s~Dg 329 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQS--AWKLHAAAKEVTSVTGLVGQTS----------SQISLG----------HDVDAISVAQDG 329 (373)
T ss_pred EEECCCCCEEEEEeccCC--cccccCCCCeEEEEECCCCEEE----------EEEECC----------CCcCeEEECCCC
Confidence 578999998766544310 01111 2357999998876641 111110 024577899999
Q ss_pred CEEEEEeeeCCeeEEEEEECCCCcEEEe
Q 004149 401 CTMLLSSIWGSSQVIISVNVSSGELLRI 428 (771)
Q Consensus 401 ~~l~~~~~~~~~~~l~~~d~~tg~~~~l 428 (771)
+++++..+. +...|..+|+.++++...
T Consensus 330 ~~~l~v~~~-~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 330 GPDLYALSA-GTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CeEEEEEcC-CCCeEEEEECCCCCEEee
Confidence 966666553 235789999999987765
No 401
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=98.83 E-value=8.6e-09 Score=115.19 Aligned_cols=118 Identities=17% Similarity=0.165 Sum_probs=80.7
Q ss_pred CCCCcEEEEEcCCCCCCCCCcc-hHHHHHHH-HCCcEEEEECCC-CCCCCChhhh---h-cCCCCccccchhhHHHHHHH
Q 004149 534 CSCDPLIVVLHGGPHSVSLSSY-SKSLAFLS-SVGYSLLIVNYR-GSLGFGEEAL---Q-SLPGKVGSQDVNDVLTAIDH 606 (771)
Q Consensus 534 ~~~~p~vv~~HGg~~~~~~~~~-~~~~~~la-~~G~~V~~~d~r-G~~~~g~~~~---~-~~~~~~~~~~~~D~~~~i~~ 606 (771)
.++.|+||++|||++....... ......|+ +.|++|+.+||| |.-||..... . ......+...+.|+.++++|
T Consensus 138 ~~~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~w 217 (585)
T 1dx4_A 138 TNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRW 217 (585)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHH
Confidence 4678999999999876544321 12234555 479999999999 3222221100 0 00111223348899999999
Q ss_pred HHHcC---CCCCCeEEEEEcChhHHHHHHHHHhC--CCceeEEEecCCcc
Q 004149 607 VIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLC 651 (771)
Q Consensus 607 l~~~~---~~d~~ri~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~p~~ 651 (771)
+.++. ..|++||.|+|+|.||.++..++... ..+|+++|+.+|..
T Consensus 218 v~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 218 LKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 99863 36899999999999999998887652 36899999988854
No 402
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=98.82 E-value=3.4e-09 Score=109.90 Aligned_cols=208 Identities=13% Similarity=0.072 Sum_probs=112.6
Q ss_pred EEEEEcC--CCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHH-HHHHHcCCCCC
Q 004149 539 LIVVLHG--GPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAI-DHVIDMGLANP 615 (771)
Q Consensus 539 ~vv~~HG--g~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i-~~l~~~~~~d~ 615 (771)
.|+++|| ++.. ...|...+..|. .+|.|+.+|+||.+. +... ........++++.+.+ +.+... ...
T Consensus 91 ~l~~~hg~g~~~~--~~~~~~l~~~L~-~~~~v~~~d~~G~g~---~~~~--~~~~~~~~~~~~a~~~~~~i~~~--~~~ 160 (319)
T 2hfk_A 91 VLVGCTGTAANGG--PHEFLRLSTSFQ-EERDFLAVPLPGYGT---GTGT--GTALLPADLDTALDAQARAILRA--AGD 160 (319)
T ss_dssp EEEEECCCCTTCS--TTTTHHHHHTTT-TTCCEEEECCTTCCB---C-----CBCCEESSHHHHHHHHHHHHHHH--HTT
T ss_pred cEEEeCCCCCCCc--HHHHHHHHHhcC-CCCceEEecCCCCCC---Cccc--ccCCCCCCHHHHHHHHHHHHHHh--cCC
Confidence 7999997 3332 446777777775 689999999999433 2000 0001112233333222 222222 123
Q ss_pred CeEEEEEcChhHHHHHHHHHhC----CCceeEEEecCCccchhhhhcCCCCCcch--hhhhccCCCCCcCCCCCChhhH-
Q 004149 616 SKVTVVGGSHGGFLTTHLIGQA----PDKFVAAAARNPLCNLALMVGTTDIPDWC--YVESYGSKGKDSFTESPSVEDL- 688 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~----p~~~~a~v~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~- 688 (771)
.++.|+|||+||.++..+|.+. ++.++++++.++........ ...+. ........ .+.. ......
T Consensus 161 ~p~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~----~~~~~~~l~~~~~~~---~~~~-~~~~~~~ 232 (319)
T 2hfk_A 161 APVVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEP----IEVWSRQLGEGLFAG---ELEP-MSDARLL 232 (319)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHH----HHHTHHHHHHHHHHT---CSSC-CCHHHHH
T ss_pred CCEEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhH----HHHHHHHhhHHHHHh---hccc-cchHHHH
Confidence 6799999999999999999876 45688888887643210000 00000 00000000 0000 011111
Q ss_pred --HHHhhcCccccccCCCCcEEEEeeCCCCccCcHH-HHHHHHHHHhCCCCEEEEEeCCCCccCCCCCChHHHHHHHHHH
Q 004149 689 --TRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSN-GLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLW 765 (771)
Q Consensus 689 --~~~~~~sp~~~~~~i~~P~Lii~G~~D~~vp~~~-~~~~~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~w 765 (771)
..+...........+++|+++++| .|..+++.. ...+.+. ....++++.++ ++|.....+....+.+.+.+|
T Consensus 233 ~~~~~~~~~~~~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~---~~~~~~~~~v~-g~H~~~~~e~~~~~~~~i~~~ 307 (319)
T 2hfk_A 233 AMGRYARFLAGPRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAH---WDLPHTVADVP-GDHFTMMRDHAPAVAEAVLSW 307 (319)
T ss_dssp HHHHHHHHHHSCCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCC---CSSCSEEEEES-SCTTHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcCCCEEEEEc-CCCCCCccccccchhhc---CCCCCEEEEeC-CCcHHHHHHhHHHHHHHHHHH
Confidence 111110001124678899999999 999888764 2222111 12247888898 589743323566788889999
Q ss_pred HHHH
Q 004149 766 FKKY 769 (771)
Q Consensus 766 l~~~ 769 (771)
|++.
T Consensus 308 L~~~ 311 (319)
T 2hfk_A 308 LDAI 311 (319)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9764
No 403
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Probab=98.82 E-value=1.6e-08 Score=107.94 Aligned_cols=109 Identities=20% Similarity=0.225 Sum_probs=72.7
Q ss_pred CCcEEEEEcCCCCCCCCCcc--hHHHHHHH-HCCcEEEEECCCCCCCCChhhhhc--C---CCCc----cccchhhHHHH
Q 004149 536 CDPLIVVLHGGPHSVSLSSY--SKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQS--L---PGKV----GSQDVNDVLTA 603 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~--~~~~~~la-~~G~~V~~~d~rG~~~~g~~~~~~--~---~~~~----~~~~~~D~~~~ 603 (771)
..| ||++|||.+.... .+ ......++ +.|+.|+++|+|| ||++.... . ..+. ..+.++|+...
T Consensus 38 g~P-i~l~~Ggeg~~~~-~~~~~g~~~~lA~~~~~~Vi~~DhRg---~G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~ 112 (446)
T 3n2z_B 38 GGS-ILFYTGNEGDIIW-FCNNTGFMWDVAEELKAMLVFAEHRY---YGESLPFGDNSFKDSRHLNFLTSEQALADFAEL 112 (446)
T ss_dssp TCE-EEEEECCSSCHHH-HHHHCHHHHHHHHHHTEEEEEECCTT---STTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHH
T ss_pred CCC-EEEEeCCCCcchh-hhhcccHHHHHHHHhCCcEEEEecCC---CCCCCCCCccccccchhhccCCHHHHHHHHHHH
Confidence 345 6777888764311 11 11233343 4589999999999 55543211 0 0111 12347888888
Q ss_pred HHHHHHcC-CCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCC
Q 004149 604 IDHVIDMG-LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNP 649 (771)
Q Consensus 604 i~~l~~~~-~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p 649 (771)
++++.... .....++.++||||||.+|++++.++|+++.++|+.++
T Consensus 113 ~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssa 159 (446)
T 3n2z_B 113 IKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASA 159 (446)
T ss_dssp HHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETC
T ss_pred HHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEecc
Confidence 88887652 22345899999999999999999999999999988664
No 404
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=98.82 E-value=1.2e-08 Score=106.21 Aligned_cols=210 Identities=11% Similarity=0.059 Sum_probs=113.8
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHH-HHHHHHcCCCC
Q 004149 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTA-IDHVIDMGLAN 614 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~-i~~l~~~~~~d 614 (771)
..|.|+++||.+.. ...|...+..| ..+|.|+.+|++| +|.+... . ..++++.+. ++.+.+.. .
T Consensus 100 ~~~~l~~lhg~~~~--~~~~~~l~~~L-~~~~~v~~~d~~g---~~~~~~~--~-----~~~~~~a~~~~~~i~~~~--~ 164 (329)
T 3tej_A 100 NGPTLFCFHPASGF--AWQFSVLSRYL-DPQWSIIGIQSPR---PNGPMQT--A-----ANLDEVCEAHLATLLEQQ--P 164 (329)
T ss_dssp SSCEEEEECCTTSC--CGGGGGGGGTS-CTTCEEEEECCCT---TTSHHHH--C-----SSHHHHHHHHHHHHHHHC--S
T ss_pred CCCcEEEEeCCccc--chHHHHHHHhc-CCCCeEEEeeCCC---CCCCCCC--C-----CCHHHHHHHHHHHHHHhC--C
Confidence 45789999997655 44666666666 5689999999998 4433211 1 124444333 33333331 2
Q ss_pred CCeEEEEEcChhHHHHHHHHHh---CCCceeEEEecCCccchhhhhcCC-----CCCcchhhhhccCCC-CCcCCCCCCh
Q 004149 615 PSKVTVVGGSHGGFLTTHLIGQ---APDKFVAAAARNPLCNLALMVGTT-----DIPDWCYVESYGSKG-KDSFTESPSV 685 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~---~p~~~~a~v~~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~ 685 (771)
..++.|+||||||.++..++.+ +|+.+..+++..+........... +.............. ........ .
T Consensus 165 ~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 243 (329)
T 3tej_A 165 HGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTS-T 243 (329)
T ss_dssp SSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC-----CCCCTHHHHHHHHHHHHHHTTCCCSC-C
T ss_pred CCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCccccccccccccChhhHHHHHHHHHHHHHhcccccc-H
Confidence 3689999999999999999998 899999999888765432111000 000000000000000 00000001 1
Q ss_pred hhHHHH----hhc-C--ccccccCCCCcEEEEeeCCCCccCcHHHHHHHHHHHhCCCCEEEEEeCCCCcc-CCCCCChHH
Q 004149 686 EDLTRF----HSK-S--PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHG-IERPQSDFE 757 (771)
Q Consensus 686 ~~~~~~----~~~-s--p~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~~~~~H~-~~~~~~~~~ 757 (771)
.....+ ... . .......+.+|++++.|+.|..++......+.+.. .+++++.++ ++|. +..+.....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~----~~~~~~~v~-g~H~~~~~~~~~~~ 318 (329)
T 3tej_A 244 ELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWI----AELDIYRQD-CAHVDIISPGTFEK 318 (329)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTE----EEEEEEEES-SCGGGGGSTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCCCCchhhHHHhc----CCcEEEEec-CChHHhCCChHHHH
Confidence 111111 000 0 00113456789999999999887765443332222 358888897 5776 333333334
Q ss_pred HHHHHHHHH
Q 004149 758 SFLNIGLWF 766 (771)
Q Consensus 758 ~~~~i~~wl 766 (771)
+...+.+||
T Consensus 319 ia~~l~~~L 327 (329)
T 3tej_A 319 IGPIIRATL 327 (329)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 445555554
No 405
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=98.81 E-value=2.5e-09 Score=119.18 Aligned_cols=129 Identities=21% Similarity=0.263 Sum_probs=86.1
Q ss_pred cCCCceEEEEEEecCCCC---CCCCCcEEEEEcCCCCCCCCCc-chHHHHHHHHC-CcEEEEECCCCCC-CCChhhhhcC
Q 004149 515 KGAQKPFEAIFVSSSHKK---DCSCDPLIVVLHGGPHSVSLSS-YSKSLAFLSSV-GYSLLIVNYRGSL-GFGEEALQSL 588 (771)
Q Consensus 515 ~~~g~~l~~~~~~P~~~~---~~~~~p~vv~~HGg~~~~~~~~-~~~~~~~la~~-G~~V~~~d~rG~~-~~g~~~~~~~ 588 (771)
+.|.+.+ .+|.|.... ..++.|+||++|||++...... +.. ..|+++ |++|+.+|||... |+.....
T Consensus 108 sEdcL~l--~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~--- 180 (574)
T 3bix_A 108 SEDCLYL--NIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLSTGD--- 180 (574)
T ss_dssp CSCCCEE--EEEEEC--------CCEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSS---
T ss_pred CCcCCEE--EEEECCCCCcCCCCCCCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcCCC---
Confidence 3455444 578887431 2356899999999987654432 222 345554 6999999999522 1111000
Q ss_pred CCCccccchhhHHHHHHHHHHc---CCCCCCeEEEEEcChhHHHHHHHHHhCC---CceeEEEecCCc
Q 004149 589 PGKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPL 650 (771)
Q Consensus 589 ~~~~~~~~~~D~~~~i~~l~~~---~~~d~~ri~l~G~S~GG~~a~~~a~~~p---~~~~a~v~~~p~ 650 (771)
....+...+.|+.++++|+.++ ...|++||.|+|+|.||.++..++.... .+|+++|+.++.
T Consensus 181 ~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 181 QAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 0112234589999999999985 2368999999999999999998887543 568999988763
No 406
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.81 E-value=9.7e-08 Score=102.17 Aligned_cols=258 Identities=14% Similarity=0.064 Sum_probs=122.3
Q ss_pred EEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcce--EEEecCCcccccccCCCcccceeecC--------CCCeEEEE
Q 004149 103 AVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLE--KEFHVPQTVHGSVYADGWFEGISWNS--------DETLIAYV 170 (771)
Q Consensus 103 ~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~wSp--------Dg~~la~~ 170 (771)
...++|+++.||..+... .+.+| ..++.. .......+..+.| ..++|+| ||+.||..
T Consensus 94 ~~~~~~~~~~las~~~d~-----~v~lw~~~~~~~~~~~~~~~~~gH~~~v------~~v~~~p~~~~~~~~d~~~las~ 162 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQDN-----TVRLIITKNETIITQHVLGGKSGHHNFV------NDIDIADVYSADNRLAEQVIASV 162 (393)
T ss_dssp ---CCEEEEEEEEEETTS-----CEEEEEEETTEEEEEEEECTTTSCSSCE------EEEEEEEEECTTCSEEEEEEEEE
T ss_pred eeecCCCCCEEEEEeCCC-----cEEEEECCCCccceeeeecccCCCCCce------EEEEEccccccccCCCCCEEEEE
Confidence 345577777777665443 34444 222222 2222222333333 7899998 89989887
Q ss_pred ecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce-eeccCCCCCCccceEEEec
Q 004149 171 AEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV-QAVKGIPKSLSVGQVVWAP 249 (771)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~-~~l~~~~~~~~~~~~~wsp 249 (771)
+.+ ..|.+||+.++.. ..+ ......+..++|+|
T Consensus 163 s~D--------------------------------------------~tv~~Wd~~~~~~~~~~--~~~~~~v~~v~~~p 196 (393)
T 4gq1_A 163 GDD--------------------------------------------CTLIIWRLTDEGPILAG--YPLSSPGISVQFRP 196 (393)
T ss_dssp ETT--------------------------------------------SEEEEEEEETTEEEEEE--EECSSCEEEEEEET
T ss_pred ECC--------------------------------------------CeEEEEECCCCceeeee--cCCCCCcEEEEECC
Confidence 543 5889999977654 333 34445677899999
Q ss_pred CCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCC-------C---CcceecCCCCccc
Q 004149 250 LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE-------D---LPVVNLTESISSA 319 (771)
Q Consensus 250 Dg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~-------~---~~~~~lt~~~~~~ 319 (771)
++.. ++.++. .+..|.++|+........... ...... . ............+
T Consensus 197 ~~~~----~l~~~~--------------~d~~v~~wd~~t~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v 257 (393)
T 4gq1_A 197 SNPN----QLIVGE--------------RNGNIRIFDWTLNLSAEENSQ-TELVKNPWLLTLNTLPLVNTCHSSGIASSL 257 (393)
T ss_dssp TEEE----EEEEEE--------------TTSEEEEEETTCCC-----------CSCCCSEEEESGGGC------CCSSSC
T ss_pred CCCc----eEEecC--------------CCCEEEEEECCCCcccccccc-cCCcccceEEecccccceeeeecccccccc
Confidence 9875 555542 223566777621100000000 000000 0 0000111223345
Q ss_pred cceeec-CCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccc-cCCCCCCccc
Q 004149 320 FFPRFS-PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLY-SSSILSNPWL 397 (771)
Q Consensus 320 ~~p~~S-pDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~-~~~~~~~~~s 397 (771)
....|+ |||+.|+-.+.+. .+.+||+.++...........-+..+.. .....++- ........|+
T Consensus 258 ~~v~~~~~dg~~l~s~s~d~-----------~i~vwd~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 324 (393)
T 4gq1_A 258 ANVRWIGSDGSGILAMCKSG-----------AWLRWNLFANNDYNEISDSTMKLGPKNL--LPNVQGISLFPSLLGACPH 324 (393)
T ss_dssp SEEEEETTTTCEEEEECTTS-----------EEEEEEC-------------------CC--SCSEEEECSSCCSSCCEEC
T ss_pred eeeeeecCCCCEEEEEeCCC-----------CEEEEECccCCCCceEeeecCccccEEE--ccccccccccCcceeEEEc
Confidence 667776 8999988766543 4778887765432211111000000000 00000000 0011233344
Q ss_pred c-CCCEEEEEeeeCCeeEEEEEECCCCcEEEe-cCCCCCceeeEEeecCCEEEEEE
Q 004149 398 S-DGCTMLLSSIWGSSQVIISVNVSSGELLRI-TPAESNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 398 ~-dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l-~~~~~~~~~~~~s~d~~~l~~~~ 451 (771)
+ .++.++++...++...| +|..+++.... ......+....|+|||+.|+...
T Consensus 325 ~~~~~~~~~sgs~Dg~V~l--wd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as 378 (393)
T 4gq1_A 325 PRYMDYFATAHSQHGLIQL--INTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIAT 378 (393)
T ss_dssp SSCTTEEEEEETTTTEEEE--EETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred cCCCCEEEEEECCCCEEEE--EECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEe
Confidence 3 44445555555555555 47777764433 33334566678999999887665
No 407
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.80 E-value=1.1e-07 Score=101.60 Aligned_cols=90 Identities=3% Similarity=-0.002 Sum_probs=49.9
Q ss_pred hcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCC--------CCCeEEEEecCCCCCCeEEEEec---CCc
Q 004149 66 LANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSP--------SGSKLLVVRNPENESPIQFELWS---QSQ 134 (771)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SP--------dG~~la~~~~~~~~~~~~~~~~~---~~~ 134 (771)
+.....+.+.+|++...... .+.....+....+.+...+||| ||+.||-.+.+. ...+|+ ++.
T Consensus 105 as~~~d~~v~lw~~~~~~~~-~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~-----tv~~Wd~~~~~~ 178 (393)
T 4gq1_A 105 ACVCQDNTVRLIITKNETII-TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC-----TLIIWRLTDEGP 178 (393)
T ss_dssp EEEETTSCEEEEEEETTEEE-EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS-----EEEEEEEETTEE
T ss_pred EEEeCCCcEEEEECCCCccc-eeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC-----eEEEEECCCCce
Confidence 33344456666666433211 1111123333446789999998 999999877654 566663 222
Q ss_pred ceEEEecCCcccccccCCCcccceeecCCCCe-EEEEe
Q 004149 135 LEKEFHVPQTVHGSVYADGWFEGISWNSDETL-IAYVA 171 (771)
Q Consensus 135 ~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~-la~~~ 171 (771)
...+......+ .+++|+|++.. |+..+
T Consensus 179 ~~~~~~~~~~v----------~~v~~~p~~~~~l~~~~ 206 (393)
T 4gq1_A 179 ILAGYPLSSPG----------ISVQFRPSNPNQLIVGE 206 (393)
T ss_dssp EEEEEECSSCE----------EEEEEETTEEEEEEEEE
T ss_pred eeeecCCCCCc----------EEEEECCCCCceEEecC
Confidence 22333323222 58999999875 44443
No 408
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.78 E-value=1.7e-06 Score=90.30 Aligned_cols=101 Identities=15% Similarity=0.072 Sum_probs=61.8
Q ss_pred cceeecCCCCEEEEEecCCCCCCCCccc-cccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCcccc
Q 004149 320 FFPRFSPDGKFLVFLSAKSSVDSGAHSA-TDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 398 (771)
Q Consensus 320 ~~p~~SpDG~~l~f~~~~~~~~~g~~~~-~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~ 398 (771)
....++||+++|+...+... .|.|.. ..+|+++|+++++...- +.... ...++.+|+
T Consensus 283 q~~a~~~~~~~lyV~~~~~~--~~~hk~~~~~V~viD~~t~kv~~~----------i~vg~----------~~~~lavs~ 340 (386)
T 3sjl_D 283 QQVAYHRALDRIYLLVDQRD--EWRHKTASRFVVVLDAKTGERLAK----------FEMGH----------EIDSINVSQ 340 (386)
T ss_dssp SCEEEETTTTEEEEEEEECC--TTCTTSCEEEEEEEETTTCCEEEE----------EEEEE----------EECEEEECS
T ss_pred ceeeECCCCCeEEEEecccc--ccccCCCCCEEEEEECCCCeEEEE----------EECCC----------CcceEEECC
Confidence 34677999999877654321 133332 46899999998775221 10000 134678999
Q ss_pred CCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeec
Q 004149 399 DGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLD 443 (771)
Q Consensus 399 dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d 443 (771)
|++.++|.++ .....+..+|..++++.+-....+......+++|
T Consensus 341 D~~~~ly~tn-~~~~~VsViD~~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 341 DEKPLLYALS-TGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp SSSCEEEEEE-TTTTEEEEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred CCCeEEEEEc-CCCCeEEEEECCCCcEEEEecCCCCCceeEECCc
Confidence 9985555554 3345688889999987765554443344556655
No 409
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.77 E-value=4.2e-07 Score=95.67 Aligned_cols=188 Identities=14% Similarity=0.134 Sum_probs=107.7
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004149 100 GASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
.+....++++++.++++...+ ..+.+|+ .++..........+ ..+.|++++. +...+..
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d----~~v~iWd~~~~~~~~~~~~~~~v----------~~v~~~~~~~--~~~~~~~--- 120 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVK----EVVHIWDDVKKQDVSRIKVDAPV----------KDLFLSREFI--VVSYGDV--- 120 (355)
T ss_dssp CCCEEEECTTSSEEEEECSST----TEEEEEETTTTEEEEEEECSSCE----------EEEEECSSEE--EEEETTE---
T ss_pred CeEEEEEcCCCCEEEEEECCc----cEEEEEECCCCcEEEEEECCCce----------EEEEEcCCEE--EEEEcCE---
Confidence 366788999999998775432 2566773 33333333332222 5788888753 2222211
Q ss_pred CCCccCCCC-CCCCCCccCCCCCCcccccCCcCcccC--CccCceEEEEEccCCc-----------------eeeccCCC
Q 004149 178 KPTFSLGST-KGGSSDKDCNSWKGQGDWEEDWGETYA--GKRQPSLFVININSGE-----------------VQAVKGIP 237 (771)
Q Consensus 178 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~g~~~~--~~~~~~l~v~d~~~~~-----------------~~~l~~~~ 237 (771)
...|+.... ........ ..+...+++ ..... +.....|.+||+.+++ ...+ ..
T Consensus 121 i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~--~~ 193 (355)
T 3vu4_A 121 ISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI--KA 193 (355)
T ss_dssp EEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEE--CC
T ss_pred EEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEE--Ec
Confidence 112222111 01111100 001111222 11111 3456789999998875 4555 34
Q ss_pred CCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCce-eEEEecccccchhhhhhhhcCCCCCCc-ceecC-C
Q 004149 238 KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCA-LYAVRVSLYKSEASELELKESSSEDLP-VVNLT-E 314 (771)
Q Consensus 238 ~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~-l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt-~ 314 (771)
....+..++|||||+. |+..+ .+.. |.++|+ .+++ ...+. .
T Consensus 194 h~~~v~~~~~s~~g~~----l~s~s---------------~d~~~v~iwd~-----------------~~~~~~~~~~~g 237 (355)
T 3vu4_A 194 HTNPIKMVRLNRKSDM----VATCS---------------QDGTIIRVFKT-----------------EDGVLVREFRRG 237 (355)
T ss_dssp CSSCEEEEEECTTSSE----EEEEE---------------TTCSEEEEEET-----------------TTCCEEEEEECT
T ss_pred cCCceEEEEECCCCCE----EEEEe---------------CCCCEEEEEEC-----------------CCCcEEEEEEcC
Confidence 5557889999999997 77665 2335 888887 5554 34454 2
Q ss_pred -CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCC
Q 004149 315 -SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 315 -~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
+...+.+.+|||||+.|+..+.+. .|.+||+..+.
T Consensus 238 ~h~~~v~~~~~s~~~~~l~s~s~d~-----------~v~iw~~~~~~ 273 (355)
T 3vu4_A 238 LDRADVVDMKWSTDGSKLAVVSDKW-----------TLHVFEIFNDQ 273 (355)
T ss_dssp TCCSCEEEEEECTTSCEEEEEETTC-----------EEEEEESSCCS
T ss_pred CCCCcEEEEEECCCCCEEEEEECCC-----------EEEEEEccCCC
Confidence 566789999999999998877653 48888886654
No 410
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.76 E-value=9.6e-08 Score=105.73 Aligned_cols=164 Identities=9% Similarity=-0.054 Sum_probs=98.0
Q ss_pred ceEEEEEccCCcee------------eccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEE
Q 004149 218 PSLFVININSGEVQ------------AVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 285 (771)
Q Consensus 218 ~~l~v~d~~~~~~~------------~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~ 285 (771)
..|.+||+.+++.. .+ ......+..++|+|++ . |+..+ .+..|.++
T Consensus 235 gtvrlWd~~~~~~~~~~~~~~~~p~~~l--~~h~~~v~sv~~s~~~-~----lasgs---------------~DgtV~lW 292 (524)
T 2j04_B 235 GTINFLEIIDNATDVHVFKMCEKPSLTL--SLADSLITTFDFLSPT-T----VVCGF---------------KNGFVAEF 292 (524)
T ss_dssp SCEEEEECCCCSSSSSEEECCCSCSEEE--CCTTTCEEEEEESSSS-E----EEEEE---------------TTSEEEEE
T ss_pred CeEEEEEcCCCccccccceeecCceEEE--EcCCCCEEEEEecCCC-e----EEEEe---------------CCCEEEEE
Confidence 46778887765321 22 2234467789999864 4 66554 33478888
Q ss_pred ecccccchhhhhhhhcCCCCCCc--ceecCCCCccccce--eecCCC-CEEEEEecCCCCCCCCccccccceeeecCCCC
Q 004149 286 RVSLYKSEASELELKESSSEDLP--VVNLTESISSAFFP--RFSPDG-KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 286 d~~~~~~~~~~~~~~~~~~~~~~--~~~lt~~~~~~~~p--~~SpDG-~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
|+ .++. ...+..+...+.+. .|+||| +.|+..+.+. .|.+||+.+++
T Consensus 293 D~-----------------~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~-----------tvklWD~~~~~ 344 (524)
T 2j04_B 293 DL-----------------TDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDG-----------YFYIFNPKDIA 344 (524)
T ss_dssp ET-----------------TBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTS-----------EEEEECGGGHH
T ss_pred EC-----------------CCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCC-----------eEEEEECCCCC
Confidence 88 4332 23455666678887 689998 7777666553 58888887644
Q ss_pred CCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcE-EEecCCCCCceeeE
Q 004149 361 NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL-LRITPAESNFSWSL 439 (771)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~-~~l~~~~~~~~~~~ 439 (771)
......+. .. ...+..++|+||++.+ +++..++...| +|+.++.. ..+......+....
T Consensus 345 ~~~~~~~~--------------~~---~~~v~~v~fsp~~~~l-~s~~~d~tv~l--wd~~~~~~~~~l~gH~~~V~sva 404 (524)
T 2j04_B 345 TTKTTVSR--------------FR---GSNLVPVVYCPQIYSY-IYSDGASSLRA--VPSRAAFAVHPLVSRETTITAIG 404 (524)
T ss_dssp HHCEEEEE--------------CS---CCSCCCEEEETTTTEE-EEECSSSEEEE--EETTCTTCCEEEEECSSCEEEEE
T ss_pred cccccccc--------------cc---cCcccceEeCCCcCeE-EEeCCCCcEEE--EECcccccceeeecCCCceEEEE
Confidence 31110000 00 0124568899999865 44444444444 57777664 44554444566678
Q ss_pred EeecCCEEEEEE
Q 004149 440 LTLDGDNIIAVS 451 (771)
Q Consensus 440 ~s~d~~~l~~~~ 451 (771)
|+|+++.|+..+
T Consensus 405 ~Sp~g~~l~Sgs 416 (524)
T 2j04_B 405 VSRLHPMVLAGS 416 (524)
T ss_dssp CCSSCCBCEEEE
T ss_pred eCCCCCeEEEEE
Confidence 888888665433
No 411
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.75 E-value=3.6e-07 Score=99.14 Aligned_cols=205 Identities=10% Similarity=0.070 Sum_probs=118.6
Q ss_pred ccceEEEeCC-CCCeEEEEecCCCCCCeEEEEec--C---Cc-c--eEEEecCCcccccccCCCcccceeecCCCCeEEE
Q 004149 99 TGASAVVPSP-SGSKLLVVRNPENESPIQFELWS--Q---SQ-L--EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAY 169 (771)
Q Consensus 99 ~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~~~~--~---~~-~--~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~ 169 (771)
+.+...+||| ||++||..+..+ .+.+|+ . +. . ......... +.+++|+||++.|+.
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg-----~v~vwd~~~~~~~~~~~~~~~~~h~~~----------v~~~~~~~~~~~l~s 128 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQG-----VIKIWNLKEIIVGEVYSSSLTYDCSST----------VTQITMIPNFDAFAV 128 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTS-----EEEEEEHHHHHTTCCCSCSEEEECSSC----------EEEEEECTTSSEEEE
T ss_pred CceEEEEECCCCCCEEEEecCCc-----eEEEeECcccccCcccceeeeccCCCC----------EEEEEEeCCCCEEEE
Confidence 4588999999 999998876543 556662 2 21 1 111121222 369999999999888
Q ss_pred EecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEcc---CCceeecc---------CCC
Q 004149 170 VAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ---SGEVQAVK---------GIP 237 (771)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~---~~~~~~l~---------~~~ 237 (771)
.+.+ ..|.+||+. +++..... ..+
T Consensus 129 ~s~d--------------------------------------------g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~ 164 (437)
T 3gre_A 129 SSKD--------------------------------------------GQIIVLKVNHYQQESEVKFLNCECIRKINLKN 164 (437)
T ss_dssp EETT--------------------------------------------SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGG
T ss_pred EeCC--------------------------------------------CEEEEEEeccccCCceeeccccceeEEEEccC
Confidence 6543 567788773 44333220 001
Q ss_pred --CCCccceEE--EecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceec
Q 004149 238 --KSLSVGQVV--WAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNL 312 (771)
Q Consensus 238 --~~~~~~~~~--wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~l 312 (771)
....+..+. |+||++. |+..+ .+..|.++|+ .+++ ...+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~----l~~~~---------------~d~~i~iwd~-----------------~~~~~~~~~ 208 (437)
T 3gre_A 165 FGKNEYAVRMRAFVNEEKSL----LVALT---------------NLSRVIIFDI-----------------RTLERLQII 208 (437)
T ss_dssp GSSCCCEEEEEEEECSSCEE----EEEEE---------------TTSEEEEEET-----------------TTCCEEEEE
T ss_pred cccccCceEEEEEEcCCCCE----EEEEe---------------CCCeEEEEeC-----------------CCCeeeEEE
Confidence 111222222 5667765 55554 3347899998 4554 3444
Q ss_pred CC--CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCC-c-cceeeEEecccccCCCCCccccc
Q 004149 313 TE--SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS-L-EKIVDVIPVVQCAEGDCFPGLYS 388 (771)
Q Consensus 313 t~--~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~-~-~~~~~~~~~~~~~~~~~f~g~~~ 388 (771)
.. +...+....|+|||+.|+..+.+. .|.+||+.++..... . .....+..+
T Consensus 209 ~~~~h~~~v~~~~~s~~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~v~~~-------------- 263 (437)
T 3gre_A 209 ENSPRHGAVSSICIDEECCVLILGTTRG-----------IIDIWDIRFNVLIRSWSFGDHAPITHV-------------- 263 (437)
T ss_dssp ECCGGGCCEEEEEECTTSCEEEEEETTS-----------CEEEEETTTTEEEEEEBCTTCEEEEEE--------------
T ss_pred ccCCCCCceEEEEECCCCCEEEEEcCCC-----------eEEEEEcCCccEEEEEecCCCCceEEE--------------
Confidence 44 456788999999999988777653 488999887553211 0 111011100
Q ss_pred CCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEe
Q 004149 389 SSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI 428 (771)
Q Consensus 389 ~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l 428 (771)
...+.|++|++.| ++...++ .|..+|+.+++....
T Consensus 264 --~~~~~~s~~~~~l-~s~~~dg--~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 264 --EVCQFYGKNSVIV-VGGSSKT--FLTIWNFVKGHCQYA 298 (437)
T ss_dssp --EECTTTCTTEEEE-EEESTTE--EEEEEETTTTEEEEE
T ss_pred --EeccccCCCccEE-EEEcCCC--cEEEEEcCCCcEEEE
Confidence 0123677888644 4444444 466668877775443
No 412
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.74 E-value=1e-06 Score=89.96 Aligned_cols=252 Identities=9% Similarity=-0.025 Sum_probs=134.7
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeE
Q 004149 47 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 126 (771)
Q Consensus 47 ~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 126 (771)
|..++||+.|.++... ...|+.++. .++ ...+.... ......+++|||+.++.. . +...+
T Consensus 33 ~~~d~~g~~l~~~~~~--------~~~i~~~~~--~~~-~~~~~~~~-----~~~~~l~~~~dg~l~v~~-~---~~~~i 92 (296)
T 3e5z_A 33 PVYVPARSAVIFSDVR--------QNRTWAWSD--DGQ-LSPEMHPS-----HHQNGHCLNKQGHLIACS-H---GLRRL 92 (296)
T ss_dssp EEEEGGGTEEEEEEGG--------GTEEEEEET--TSC-EEEEESSC-----SSEEEEEECTTCCEEEEE-T---TTTEE
T ss_pred CeEeCCCCEEEEEeCC--------CCEEEEEEC--CCC-eEEEECCC-----CCcceeeECCCCcEEEEe-c---CCCeE
Confidence 3345677766665322 246777654 222 33332221 446778999999854332 2 22356
Q ss_pred EEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecC-CCCCCCCccCCCCCCCCCCccCCCCCCcccc
Q 004149 127 FELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE-PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 204 (771)
Q Consensus 127 ~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (771)
+.++ ..++.+.+........ ......+.++|||+ |++.... .... .+.
T Consensus 93 ~~~d~~~g~~~~~~~~~~~~~-----~~~~~~i~~d~~G~-l~vtd~~~g~~~--~~~---------------------- 142 (296)
T 3e5z_A 93 ERQREPGGEWESIADSFEGKK-----LNSPNDVCLAPDGS-LWFSDPTYGIDK--PEE---------------------- 142 (296)
T ss_dssp EEECSTTCCEEEEECEETTEE-----CCCCCCEEECTTSC-EEEEECSHHHHC--GGG----------------------
T ss_pred EEEcCCCCcEEEEeeccCCCC-----CCCCCCEEECCCCC-EEEECCcccccc--ccc----------------------
Confidence 6666 3666554443211110 00124789999997 4442100 0000 000
Q ss_pred cCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEE
Q 004149 205 EEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYA 284 (771)
Q Consensus 205 ~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~ 284 (771)
+...........||.++.+ ++.+.+ .........++|+|||+. | ++. .....|++
T Consensus 143 ---~~~~~~~~~~~~l~~~~~~-g~~~~~--~~~~~~~~gi~~s~dg~~----l-v~~--------------~~~~~i~~ 197 (296)
T 3e5z_A 143 ---GYGGEMELPGRWVFRLAPD-GTLSAP--IRDRVKPNGLAFLPSGNL----L-VSD--------------TGDNATHR 197 (296)
T ss_dssp ---SSCCCCCSSSCEEEEECTT-SCEEEE--ECCCSSEEEEEECTTSCE----E-EEE--------------TTTTEEEE
T ss_pred ---cccccccCCCcEEEEECCC-CCEEEe--ecCCCCCccEEECCCCCE----E-EEe--------------CCCCeEEE
Confidence 0000001123589999887 666666 333345678999999996 6 443 12347888
Q ss_pred EecccccchhhhhhhhcCCCCCCcc----eecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCC
Q 004149 285 VRVSLYKSEASELELKESSSEDLPV----VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 285 ~d~~~~~~~~~~~~~~~~~~~~~~~----~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
+++. ..+.. +.+...........+++||+ |+... . ..|+++|.++ +
T Consensus 198 ~~~~----------------~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~-~-----------~~v~~~~~~g-~ 247 (296)
T 3e5z_A 198 YCLN----------------ARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA-G-----------DGVHVLTPDG-D 247 (296)
T ss_dssp EEEC----------------SSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE-T-----------TEEEEECTTS-C
T ss_pred EEEC----------------CCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc-C-----------CeEEEECCCC-C
Confidence 8872 13333 22222233456789999998 44333 2 2488888653 2
Q ss_pred CCCCccceeeEEecccccCCCCCcccccCCCCCCcc-ccCCCEEEEEeeeCCeeEEEEEECCCCcEEE
Q 004149 361 NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPW-LSDGCTMLLSSIWGSSQVIISVNVSSGELLR 427 (771)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~-s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~ 427 (771)
.. ..+..+. .+..++| ++|++.|++++. ..||++++++++++.
T Consensus 248 ~~----------~~~~~~~----------~~~~~~f~~~d~~~L~v~t~----~~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 248 EL----------GRVLTPQ----------TTSNLCFGGPEGRTLYMTVS----TEFWSIETNVRGLEH 291 (296)
T ss_dssp EE----------EEEECSS----------CCCEEEEESTTSCEEEEEET----TEEEEEECSCCBCCC
T ss_pred EE----------EEEECCC----------CceeEEEECCCCCEEEEEcC----CeEEEEEcccccccc
Confidence 11 0010000 1345678 689998887764 369999998887663
No 413
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.73 E-value=3.2e-06 Score=88.74 Aligned_cols=200 Identities=11% Similarity=-0.016 Sum_probs=99.4
Q ss_pred cCceEEEEEccCCceeeccCCCCC----CccceEEEecCCCCCccEEEEEeecCcc--eeeeeeeec---cCCceeEEEe
Q 004149 216 RQPSLFVININSGEVQAVKGIPKS----LSVGQVVWAPLNEGLHQYLVFVGWSSET--RKLGIKYCY---NRPCALYAVR 286 (771)
Q Consensus 216 ~~~~l~v~d~~~~~~~~l~~~~~~----~~~~~~~wspDg~~~~~~l~~~~~~~~~--~~~g~~~~~---~~~~~l~~~d 286 (771)
....|.++|.++.+++.- .+.. ...-++.|+||++ +++++.+..+ ++.|+.... ....+|..+|
T Consensus 162 ~~g~v~vlD~~T~~v~~~--~~~~~~~~~~~Yd~~~~p~~~-----~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D 234 (462)
T 2ece_A 162 GPGGILMLDHYSFEPLGK--WEIDRGDQYLAYDFWWNLPNE-----VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWD 234 (462)
T ss_dssp SCCEEEEECTTTCCEEEE--CCSBCTTCCCCCCEEEETTTT-----EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEE
T ss_pred CCCeEEEEECCCCeEEEE--EccCCCCccccceEEECCCCC-----EEEEccCcCccccccccchhhhhhccCCEEEEEE
Confidence 457899999999887655 2211 1233588999999 4555543321 111211100 1345899999
Q ss_pred cccccchhhhhhhhcCCCCCCcc-eecCCC-C-ccccce--eecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCC
Q 004149 287 VSLYKSEASELELKESSSEDLPV-VNLTES-I-SSAFFP--RFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 361 (771)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~-~~lt~~-~-~~~~~p--~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~ 361 (771)
+ .+++. ..+.-. . ...... .|+|||++++....-.. ..-..+|+++..+.+..
T Consensus 235 ~-----------------~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~-----~~Lss~V~v~~~d~g~~ 292 (462)
T 2ece_A 235 L-----------------RKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSL-----KDLSSSIWLWFYEDGKW 292 (462)
T ss_dssp T-----------------TTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEET-----TTCCEEEEEEEEETTEE
T ss_pred C-----------------CCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeec-----cCCCceEEEEEecCCce
Confidence 8 44432 233322 1 123333 45999997554443000 00124566655544321
Q ss_pred CCCccceeeEEecccccCCCCCcccc------cCCCCCCccccCCCEEEEEeeeCCeeEEEEEECC-CCcEE---EecCC
Q 004149 362 FSSLEKIVDVIPVVQCAEGDCFPGLY------SSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS-SGELL---RITPA 431 (771)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~f~g~~------~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~-tg~~~---~l~~~ 431 (771)
. ...++++-...-.+..|.+. ......+.+|+||++||++....+. |..+++. .++.+ ++...
T Consensus 293 ~-----~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~--VavfdV~d~~~~~lv~~I~tG 365 (462)
T 2ece_A 293 N-----AEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGE--VRQYDISNPFKPVLTGKVKLG 365 (462)
T ss_dssp E-----EEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTE--EEEEECSSTTSCEEEEEEECB
T ss_pred e-----EEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCE--EEEEEecCCCCcEEEEEEEeC
Confidence 1 01111111100001111000 1234677899999998877654454 4444542 33322 22222
Q ss_pred C--------------CCceeeEEeecCCEEEEEE
Q 004149 432 E--------------SNFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 432 ~--------------~~~~~~~~s~d~~~l~~~~ 451 (771)
. +......+|+||++|+++.
T Consensus 366 G~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 366 GIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 0 0134568899999988776
No 414
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Probab=98.73 E-value=7e-09 Score=110.38 Aligned_cols=111 Identities=17% Similarity=0.216 Sum_probs=80.2
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCc---EEEEECCCCCCCCChhh-------------hh------------
Q 004149 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGY---SLLIVNYRGSLGFGEEA-------------LQ------------ 586 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~---~V~~~d~rG~~~~g~~~-------------~~------------ 586 (771)
...|+||++||.+.+ ...|...+..|+++|| .|+++|++| +|.+. ..
T Consensus 20 ~~~ppVVLlHG~g~s--~~~w~~la~~La~~Gy~~~~Via~DlpG---~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~ 94 (484)
T 2zyr_A 20 EDFRPVVFVHGLAGS--AGQFESQGMRFAANGYPAEYVKTFEYDT---ISWALVVETDMLFSGLGSEFGLNISQIIDPET 94 (484)
T ss_dssp -CCCCEEEECCTTCC--GGGGHHHHHHHHHTTCCGGGEEEECCCH---HHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHH
T ss_pred CCCCEEEEECCCCCC--HHHHHHHHHHHHHcCCCcceEEEEECCC---CCcccccccccccccccccccccccccccccc
Confidence 345779999997665 4578889999999999 799999998 44320 00
Q ss_pred ---cCCC---CccccchhhHHHHHHHHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCC---CceeEEEecCCccc
Q 004149 587 ---SLPG---KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPLCN 652 (771)
Q Consensus 587 ---~~~~---~~~~~~~~D~~~~i~~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p---~~~~a~v~~~p~~~ 652 (771)
.... .......+++.+.++.+.++. +.+++.|+||||||.+++.++.++| +.++++|+.+|..+
T Consensus 95 l~~v~~~~~~~~~~~~~~dla~~L~~ll~~l--g~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 95 LDKILSKSRERLIDETFSRLDRVIDEALAES--GADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred ccccccccccCchhhhHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 0000 011123567777777777653 3478999999999999999999987 48999999988653
No 415
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.72 E-value=1.2e-06 Score=93.14 Aligned_cols=84 Identities=17% Similarity=0.165 Sum_probs=51.5
Q ss_pred eeecCCCCEEEEEecCCCCCCCCcc-ccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCC
Q 004149 322 PRFSPDGKFLVFLSAKSSVDSGAHS-ATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDG 400 (771)
Q Consensus 322 p~~SpDG~~l~f~~~~~~~~~g~~~-~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg 400 (771)
..++|||++|+...... ..|.|. ....|.++|+.+.+... .+.... ....+.|+|||
T Consensus 324 va~s~dg~rlyVa~~~~--~~gthk~~s~~VsVID~~T~kvv~----------~I~vg~----------~P~gia~spDg 381 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQR--DEWKHKAASRFVVVLNAETGERIN----------KIELGH----------EIDSINVSQDA 381 (426)
T ss_dssp EEEEGGGTEEEEEEEEC--CTTCTTSCEEEEEEEETTTCCEEE----------EEEEEE----------EECEEEECCSS
T ss_pred eEEcCCCCEEEEEeccc--ccccccCCCCEEEEEECCCCeEEE----------EEECCC----------CcCeEEEccCC
Confidence 58999999876654321 012221 23579999998866421 111100 13467899999
Q ss_pred CEEEEEeeeCCeeEEEEEECCCCcEEEe
Q 004149 401 CTMLLSSIWGSSQVIISVNVSSGELLRI 428 (771)
Q Consensus 401 ~~l~~~~~~~~~~~l~~~d~~tg~~~~l 428 (771)
+.++|+.++ ....|..||+.++++.+-
T Consensus 382 ~~~lyv~n~-~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 382 EPLLYALSA-GTQTLHIYDAATGEELRS 408 (426)
T ss_dssp SCEEEEEET-TTTEEEEEETTTCCEEEE
T ss_pred CEEEEEEcC-CCCeEEEEECCCCCEEEE
Confidence 944455543 245688889999987754
No 416
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=98.72 E-value=8.4e-09 Score=110.55 Aligned_cols=112 Identities=12% Similarity=0.046 Sum_probs=76.7
Q ss_pred CCCcEEEEEcCCCCCCCCCcchH-HHHHH-HHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCC
Q 004149 535 SCDPLIVVLHGGPHSVSLSSYSK-SLAFL-SSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 612 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~-~~~~l-a~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 612 (771)
...|+||++||..... ...|.. .+..| +..+|.|+++|++|.+. +...... .......+++.+.++++.++..
T Consensus 67 ~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~---s~y~~~~-~~~~~v~~~la~ll~~L~~~~g 141 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKG-EESWLSTMCQNMFKVESVNCICVDWKSGSR---TAYSQAS-QNVRIVGAEVAYLVGVLQSSFD 141 (449)
T ss_dssp TTSEEEEEECCCCCTT-CTTHHHHHHHHHHHHCCEEEEEEECHHHHS---SCHHHHH-HHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEEecCCCCC-CccHHHHHHHHHHhcCCeEEEEEeCCcccC---CccHHHH-HHHHHHHHHHHHHHHHHHHhcC
Confidence 4468999999966542 234655 44554 56799999999998432 2110000 0000113466677777764433
Q ss_pred CCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCcc
Q 004149 613 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 613 ~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 651 (771)
++.+++.|+||||||.+|+.++.++|++++.+++..|..
T Consensus 142 ~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~ 180 (449)
T 1hpl_A 142 YSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAE 180 (449)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCccc
Confidence 567899999999999999999999999999999887754
No 417
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.72 E-value=2.7e-07 Score=109.55 Aligned_cols=201 Identities=12% Similarity=0.053 Sum_probs=126.3
Q ss_pred cceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccC
Q 004149 156 EGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG 235 (771)
Q Consensus 156 ~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~ 235 (771)
.+++|||||+.||..+. +..|++|+..+++....
T Consensus 21 ~~lafspdg~~lAsgs~--------------------------------------------Dg~I~lw~~~~~~~~~~-- 54 (902)
T 2oaj_A 21 IAAAFDFTQNLLAIATV--------------------------------------------TGEVHIYGQQQVEVVIK-- 54 (902)
T ss_dssp EEEEEETTTTEEEEEET--------------------------------------------TSEEEEECSTTCEEEEE--
T ss_pred EEEEECCCCCEEEEEeC--------------------------------------------CCEEEEEeCCCcEEEEE--
Confidence 69999999999988643 25788999888776555
Q ss_pred CCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eecCC
Q 004149 236 IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTE 314 (771)
Q Consensus 236 ~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt~ 314 (771)
......+..++|+| |+. |+..+ .+..|.++|+ .+++. ..+.
T Consensus 55 ~~~~~~V~~l~fsp-g~~----L~S~s---------------~D~~v~lWd~-----------------~~~~~~~~~~- 96 (902)
T 2oaj_A 55 LEDRSAIKEMRFVK-GIY----LVVIN---------------AKDTVYVLSL-----------------YSQKVLTTVF- 96 (902)
T ss_dssp CSSCCCEEEEEEET-TTE----EEEEE---------------TTCEEEEEET-----------------TTCSEEEEEE-
T ss_pred cCCCCCEEEEEEcC-CCE----EEEEE---------------CcCeEEEEEC-----------------CCCcEEEEEc-
Confidence 44455788999999 776 77665 3347888898 55543 3333
Q ss_pred CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCC
Q 004149 315 SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSN 394 (771)
Q Consensus 315 ~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~ 394 (771)
....+....|+|||++|+..+.+. .|.+||+.++..... .++.+.... ..+. .+...+..+
T Consensus 97 ~~~~V~~v~~sp~g~~l~sgs~dg-----------~V~lwd~~~~~~~~~------~i~~~~~~~-~~~~-~h~~~V~sl 157 (902)
T 2oaj_A 97 VPGKITSIDTDASLDWMLIGLQNG-----------SMIVYDIDRDQLSSF------KLDNLQKSS-FFPA-ARLSPIVSI 157 (902)
T ss_dssp CSSCEEEEECCTTCSEEEEEETTS-----------CEEEEETTTTEEEEE------EECCHHHHH-TCSS-SCCCCCCEE
T ss_pred CCCCEEEEEECCCCCEEEEEcCCC-----------cEEEEECCCCccccc------eeccccccc-cccc-cCCCCeEEE
Confidence 445688999999999988776553 488999887543100 000000000 0000 011246688
Q ss_pred ccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC-------------------CCceeeEEeecCCEEEEEEeCCC
Q 004149 395 PWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE-------------------SNFSWSLLTLDGDNIIAVSSSPV 455 (771)
Q Consensus 395 ~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~-------------------~~~~~~~~s~d~~~l~~~~s~~~ 455 (771)
+|+|++..++++...++. + .+|+.+++..+..... ..+....|+|+|+.|+....+.
T Consensus 158 ~~sp~~~~~l~~g~~dg~--v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg- 233 (902)
T 2oaj_A 158 QWNPRDIGTVLISYEYVT--L-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDN- 233 (902)
T ss_dssp EEETTEEEEEEEECSSCE--E-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTC-
T ss_pred EEccCCCCEEEEEeCCCc--E-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCC-
Confidence 999976555566655554 4 5588887755433221 2345578899988776655432
Q ss_pred CCCeEEEEEec
Q 004149 456 DVPQVKYGYFV 466 (771)
Q Consensus 456 ~p~~l~~~~~~ 466 (771)
.|.+.++.
T Consensus 234 ---~i~lWd~~ 241 (902)
T 2oaj_A 234 ---SLVFWDAN 241 (902)
T ss_dssp ---CEEEEETT
T ss_pred ---eEEEEECC
Confidence 35555543
No 418
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.71 E-value=7.2e-07 Score=99.30 Aligned_cols=240 Identities=9% Similarity=-0.019 Sum_probs=141.0
Q ss_pred EEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCc
Q 004149 103 AVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTF 181 (771)
Q Consensus 103 ~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~ 181 (771)
.+.|+.|...++|+.+.. ...+.+++ ..++....+......| ++.+||||++|+... .
T Consensus 158 ~~~~~~d~~~~~~V~~~~--~~~V~viD~~t~~v~~~i~~g~~p~----------~v~~SpDGr~lyv~~-~-------- 216 (567)
T 1qks_A 158 QQMNDWDLENLFSVTLRD--AGQIALIDGSTYEIKTVLDTGYAVH----------ISRLSASGRYLFVIG-R-------- 216 (567)
T ss_dssp SCCSCCCGGGEEEEEETT--TTEEEEEETTTCCEEEEEECSSCEE----------EEEECTTSCEEEEEE-T--------
T ss_pred ccccccCCCceEEEEeCC--CCeEEEEECCCCeEEEEEeCCCCcc----------ceEECCCCCEEEEEc-C--------
Confidence 466788877777887753 44677777 5555555555544443 889999999776542 1
Q ss_pred cCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEcc--CCceeeccCCCCCCccceEEEe----cCCCCCc
Q 004149 182 SLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ--SGEVQAVKGIPKSLSVGQVVWA----PLNEGLH 255 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~--~~~~~~l~~~~~~~~~~~~~ws----pDg~~~~ 255 (771)
...|.++|+. ++++..- ++.......+++| |||++
T Consensus 217 -----------------------------------dg~V~viD~~~~t~~~v~~--i~~G~~P~~ia~s~~~~pDGk~-- 257 (567)
T 1qks_A 217 -----------------------------------DGKVNMIDLWMKEPTTVAE--IKIGSEARSIETSKMEGWEDKY-- 257 (567)
T ss_dssp -----------------------------------TSEEEEEETTSSSCCEEEE--EECCSEEEEEEECCSTTCTTTE--
T ss_pred -----------------------------------CCeEEEEECCCCCCcEeEE--EecCCCCceeEEccccCCCCCE--
Confidence 2479999995 5554332 2333456788999 79996
Q ss_pred cEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCccee-cCCC-----------Ccccccee
Q 004149 256 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVN-LTES-----------ISSAFFPR 323 (771)
Q Consensus 256 ~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-lt~~-----------~~~~~~p~ 323 (771)
++... .. ...|.++|. .+.+... +... ...+....
T Consensus 258 --l~v~n-~~-------------~~~v~ViD~-----------------~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~ 304 (567)
T 1qks_A 258 --AIAGA-YW-------------PPQYVIMDG-----------------ETLEPKKIQSTRGMTYDEQEYHPEPRVAAIL 304 (567)
T ss_dssp --EEEEE-EE-------------TTEEEEEET-----------------TTCCEEEEEECCEECTTTCCEESCCCEEEEE
T ss_pred --EEEEE-cc-------------CCeEEEEEC-----------------CCCcEEEEEeccccccccccccCCCceEEEE
Confidence 55544 21 236778886 4444322 2111 11244567
Q ss_pred ecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEE
Q 004149 324 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTM 403 (771)
Q Consensus 324 ~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l 403 (771)
.|+++..+++...+ ..+|+++|..+.+...+ .. +. .+.|+ ....|+|||+++
T Consensus 305 ~s~~~~~~vv~~~~----------~g~v~~vd~~~~~~~~v-------~~-i~---~~~~~-------~d~~~~pdgr~~ 356 (567)
T 1qks_A 305 ASHYRPEFIVNVKE----------TGKILLVDYTDLNNLKT-------TE-IS---AERFL-------HDGGLDGSHRYF 356 (567)
T ss_dssp ECSSSSEEEEEETT----------TTEEEEEETTCSSEEEE-------EE-EE---CCSSE-------EEEEECTTSCEE
T ss_pred EcCCCCEEEEEecC----------CCeEEEEecCCCcccee-------ee-ee---ccccc-------cCceECCCCCEE
Confidence 78998876655533 25799999765432111 11 00 11221 245799999988
Q ss_pred EEEeeeCCeeEEEEEECCCCcEEEecCC-CC-Cc--eee-EEeecCCEEEEEEeCCCCCCeEEEEEecc
Q 004149 404 LLSSIWGSSQVIISVNVSSGELLRITPA-ES-NF--SWS-LLTLDGDNIIAVSSSPVDVPQVKYGYFVD 467 (771)
Q Consensus 404 ~~~~~~~~~~~l~~~d~~tg~~~~l~~~-~~-~~--~~~-~~s~d~~~l~~~~s~~~~p~~l~~~~~~~ 467 (771)
+.+... ...|..+|++++++...... .. .+ ... .+.++++.++++..-. ...|.+++..+
T Consensus 357 ~va~~~--sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g--~~~Vsvid~~~ 421 (567)
T 1qks_A 357 ITAANA--RNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMG--DDSVALIGTDP 421 (567)
T ss_dssp EEEEGG--GTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSS--SSEEEEEECCT
T ss_pred EEEeCC--CCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCC--CCeEEEecCCC
Confidence 776643 34577799999987755433 11 11 122 3567777776655322 23467766544
No 419
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.68 E-value=2.5e-06 Score=88.62 Aligned_cols=236 Identities=7% Similarity=-0.020 Sum_probs=126.1
Q ss_pred eEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCccccccc
Q 004149 72 KFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVY 150 (771)
Q Consensus 72 ~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ 150 (771)
..|+.++. .++..+++.... .......+++|||+.++...........++.++ .++....+.... ..
T Consensus 66 ~~i~~~d~--~~~~~~~~~~~~----~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~----- 133 (333)
T 2dg1_A 66 GNIFKINP--ETKEIKRPFVSH----KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDL-ST----- 133 (333)
T ss_dssp CEEEEECT--TTCCEEEEEECS----SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSS-SS-----
T ss_pred CEEEEEeC--CCCcEEEEeeCC----CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccC-cc-----
Confidence 46777654 333444433211 144778899999985544332211224677777 444444333211 10
Q ss_pred CCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce
Q 004149 151 ADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV 230 (771)
Q Consensus 151 ~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~ 230 (771)
......+.++|||+ |++....... ......||++|.++++.
T Consensus 134 -~~~~~~i~~d~~g~-l~v~~~~~~~-------------------------------------~~~~~~l~~~~~~~~~~ 174 (333)
T 2dg1_A 134 -AYCIDDMVFDSKGG-FYFTDFRGYS-------------------------------------TNPLGGVYYVSPDFRTV 174 (333)
T ss_dssp -CCCEEEEEECTTSC-EEEEECCCBT-------------------------------------TBCCEEEEEECTTSCCE
T ss_pred -CCcccceEECCCCC-EEEEeccccc-------------------------------------cCCCceEEEEeCCCCEE
Confidence 11225789999996 4443221100 01236799999888777
Q ss_pred eeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-c
Q 004149 231 QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-V 309 (771)
Q Consensus 231 ~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~ 309 (771)
+.+ ......+..++|+|||+. |++... ....|+++++. ..+. .
T Consensus 175 ~~~--~~~~~~~~~i~~~~dg~~----l~v~~~--------------~~~~i~~~d~~----------------~~g~~~ 218 (333)
T 2dg1_A 175 TPI--IQNISVANGIALSTDEKV----LWVTET--------------TANRLHRIALE----------------DDGVTI 218 (333)
T ss_dssp EEE--EEEESSEEEEEECTTSSE----EEEEEG--------------GGTEEEEEEEC----------------TTSSSE
T ss_pred EEe--ecCCCcccceEECCCCCE----EEEEeC--------------CCCeEEEEEec----------------CCCcCc
Confidence 766 222234567899999997 766541 12368888872 1121 1
Q ss_pred eec-----C--CCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCC--
Q 004149 310 VNL-----T--ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEG-- 380 (771)
Q Consensus 310 ~~l-----t--~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-- 380 (771)
..+ . ..........+++||+ |+..... ...|+++|.++ +.. ..+..+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~----------~~~v~~~d~~g-~~~----------~~~~~~~~~~ 276 (333)
T 2dg1_A 219 QPFGATIPYYFTGHEGPDSCCIDSDDN-LYVAMYG----------QGRVLVFNKRG-YPI----------GQILIPGRDE 276 (333)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEBTTCC-EEEEEET----------TTEEEEECTTS-CEE----------EEEECTTGGG
T ss_pred ccccceEEEecCCCCCCCceEECCCCC-EEEEEcC----------CCEEEEECCCC-CEE----------EEEEcCCCcc
Confidence 111 0 1113456688999998 3333222 13588888643 211 00100000
Q ss_pred CCCcccccCCCCCCccccCCCEEEEEeeeC---CeeEEEEEECC
Q 004149 381 DCFPGLYSSSILSNPWLSDGCTMLLSSIWG---SSQVIISVNVS 421 (771)
Q Consensus 381 ~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~---~~~~l~~~d~~ 421 (771)
+.+ ..+..++|++|++.|++++..+ ....||++++.
T Consensus 277 g~~-----~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 277 GHM-----LRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp TCS-----CBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred ccc-----cCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 000 0245678999998888877643 34578888864
No 420
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=98.68 E-value=1e-08 Score=109.85 Aligned_cols=111 Identities=12% Similarity=0.069 Sum_probs=74.8
Q ss_pred CCCcEEEEEcCCCCCCCCCcchH-HHHHHHH-CCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCC
Q 004149 535 SCDPLIVVLHGGPHSVSLSSYSK-SLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 612 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~-~~~~la~-~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 612 (771)
...|+||++||..... ...|.. .+..|.+ .+|.|+++|++|.+... ..... .......+++.+.+++|.++..
T Consensus 68 ~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~--y~~~~--~~~~~~a~~l~~ll~~L~~~~g 142 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKG-EENWLLDMCKNMFKVEEVNCICVDWKKGSQTS--YTQAA--NNVRVVGAQVAQMLSMLSANYS 142 (450)
T ss_dssp TTSEEEEEECCCCCTT-CTTHHHHHHHHHTTTCCEEEEEEECHHHHSSC--HHHHH--HHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEEccCCCCC-CcchHHHHHHHHHhcCCeEEEEEeCccccCCc--chHHH--HHHHHHHHHHHHHHHHHHHhcC
Confidence 4568999999966542 224554 3445544 58999999999832211 00000 0001124566677777764333
Q ss_pred CCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCcc
Q 004149 613 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 613 ~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 651 (771)
++.+++.|+||||||.+|+.++.++|+ ++.+++..|..
T Consensus 143 ~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~ 180 (450)
T 1rp1_A 143 YSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVE 180 (450)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCC
T ss_pred CChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCccc
Confidence 567899999999999999999999999 99999887754
No 421
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.67 E-value=8.6e-06 Score=81.65 Aligned_cols=204 Identities=10% Similarity=0.123 Sum_probs=123.1
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecC-CcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004149 100 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
....++|+|+++.|.++.. ....++.+. +++....+.... ... .+++++|++..|++...
T Consensus 37 ~~~gi~~d~~~~~ly~~d~---~~~~I~~~~~~g~~~~~~~~~~~~~p----------~~ia~d~~~~~lyv~d~----- 98 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDI---SEPSIGRASLHGGEPTTIIRQDLGSP----------EGIALDHLGRTIFWTDS----- 98 (267)
T ss_dssp EEEEEEEETTTTEEEEEET---TTTEEEEEESSSCCCEEEECTTCCCE----------EEEEEETTTTEEEEEET-----
T ss_pred cEEEEEEecCCCEEEEEEC---CCCEEEEEecCCCCcEEEEECCCCCc----------cEEEEEecCCeEEEEEC-----
Confidence 3567899999988866533 234677777 444333333221 122 48899999887766522
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCC-CccceEEEecCCCCCcc
Q 004149 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~-~~~~~~~wspDg~~~~~ 256 (771)
....|+++++++...+.+ .... ..+..++++|++..
T Consensus 99 --------------------------------------~~~~I~~~~~~g~~~~~~--~~~~~~~P~~i~vd~~~g~--- 135 (267)
T 1npe_A 99 --------------------------------------QLDRIEVAKMDGTQRRVL--FDTGLVNPRGIVTDPVRGN--- 135 (267)
T ss_dssp --------------------------------------TTTEEEEEETTSCSCEEE--ECSSCSSEEEEEEETTTTE---
T ss_pred --------------------------------------CCCEEEEEEcCCCCEEEE--EECCCCCccEEEEeeCCCE---
Confidence 225788899887655555 2222 35678899998876
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecC-CCCccccceeecCCCCEEEEEe
Q 004149 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLS 335 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt-~~~~~~~~p~~SpDG~~l~f~~ 335 (771)
|+++.+.. ....|+++++ ++...+.+. .........+++|||++|++..
T Consensus 136 -lyv~~~~~------------~~~~I~~~~~-----------------dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d 185 (267)
T 1npe_A 136 -LYWTDWNR------------DNPKIETSHM-----------------DGTNRRILAQDNLGLPNGLTFDAFSSQLCWVD 185 (267)
T ss_dssp -EEEEECCS------------SSCEEEEEET-----------------TSCCCEEEECTTCSCEEEEEEETTTTEEEEEE
T ss_pred -EEEEECCC------------CCcEEEEEec-----------------CCCCcEEEEECCCCCCcEEEEcCCCCEEEEEE
Confidence 66654210 1247888887 444333332 2333467789999999998877
Q ss_pred cCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 004149 336 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 415 (771)
Q Consensus 336 ~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l 415 (771)
... ..|+++|..+..... +.. ....| .. ...|+..||++.. +...|
T Consensus 186 ~~~----------~~I~~~~~~g~~~~~-------~~~------~~~~P-------~g--i~~d~~~lyva~~--~~~~v 231 (267)
T 1npe_A 186 AGT----------HRAECLNPAQPGRRK-------VLE------GLQYP-------FA--VTSYGKNLYYTDW--KTNSV 231 (267)
T ss_dssp TTT----------TEEEEEETTEEEEEE-------EEE------CCCSE-------EE--EEEETTEEEEEET--TTTEE
T ss_pred CCC----------CEEEEEecCCCceEE-------Eec------CCCCc-------eE--EEEeCCEEEEEEC--CCCeE
Confidence 542 469999986532111 111 01111 12 2356677877543 33468
Q ss_pred EEEECCCCcEEEe
Q 004149 416 ISVNVSSGELLRI 428 (771)
Q Consensus 416 ~~~d~~tg~~~~l 428 (771)
++++.++|+....
T Consensus 232 ~~~d~~~g~~~~~ 244 (267)
T 1npe_A 232 IAMDLAISKEMDT 244 (267)
T ss_dssp EEEETTTTEEEEE
T ss_pred EEEeCCCCCceEE
Confidence 9999988875543
No 422
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.66 E-value=2.3e-06 Score=89.37 Aligned_cols=123 Identities=15% Similarity=0.063 Sum_probs=70.3
Q ss_pred ecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCC-CCcccccCCCCCCccccCCCE
Q 004149 324 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGD-CFPGLYSSSILSNPWLSDGCT 402 (771)
Q Consensus 324 ~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~f~g~~~~~~~~~~~s~dg~~ 402 (771)
.+++++.++|.+. . .++++|+.++... +...+...... .-.+........+.+++||++
T Consensus 218 ~~~~~~~~~~vs~-~-----------~V~viD~~~~~~~--------v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~ 277 (368)
T 1mda_H 218 QANYPGMLVWAVA-S-----------SILQGDIPAAGAT--------MKAAIDGNESGRKADNFRSAGFQMVAKLKNTDG 277 (368)
T ss_dssp EETTTTEEEECBS-S-----------CCEEEECCSSCCE--------EECCCCSSCTHHHHTTEEECSSSCEEEETTTTE
T ss_pred ccccCCEEEEEcC-C-----------EEEEEECCCCcce--------EEEEEEeccccccccccccCcceeeEEcCCCCE
Confidence 3889999999886 3 3888888654321 11111000000 000000012223579999999
Q ss_pred EEEEeeeC-C-----eeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 403 MLLSSIWG-S-----SQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 403 l~~~~~~~-~-----~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
+|++.... + ...+..||++++++..-...........+++||+.++++.... .-.|.++|+.+.
T Consensus 278 lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~--~~~VsVID~~t~ 347 (368)
T 1mda_H 278 IMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAG--TEVLDIYDAASD 347 (368)
T ss_dssp EEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETT--TTEEEEEESSSC
T ss_pred EEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCC--CCeEEEEECCCC
Confidence 98875522 2 2345589999987654332222234568899999888777621 245888887544
No 423
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.64 E-value=1e-06 Score=96.33 Aligned_cols=273 Identities=8% Similarity=-0.015 Sum_probs=149.8
Q ss_pred EeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCC
Q 004149 105 VPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLG 184 (771)
Q Consensus 105 ~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~ 184 (771)
.++++|+.|+..+..+ .+.+|+....+.+..+. +..+. +..+.|+||+ .|+..+.+.... .|+..
T Consensus 127 ~~~~~~~~l~sgs~dg-----~i~vwd~~~~~~~~~~~-~h~~~------V~~l~~~~~~-~l~s~s~dg~i~--vwd~~ 191 (464)
T 3v7d_B 127 CLQFEDNYVITGADDK-----MIRVYDSINKKFLLQLS-GHDGG------VWALKYAHGG-ILVSGSTDRTVR--VWDIK 191 (464)
T ss_dssp EEEEETTEEEEEETTS-----CEEEEETTTTEEEEEEC-CCSSC------EEEEEECSTT-EEEEEETTSCEE--EEETT
T ss_pred EEEECCCEEEEEcCCC-----cEEEEECCCCcEEEEEe-CCCcC------EEEEEEcCCC-EEEEEeCCCCEE--EEECC
Confidence 4556788887765543 45566322222222221 11122 2689999999 677766655432 33332
Q ss_pred CCCCCCCCccCCCCCCccccc--CCcCcccCCccCceEEEEEccCCceeeccCCC--------------------CCCcc
Q 004149 185 STKGGSSDKDCNSWKGQGDWE--EDWGETYAGKRQPSLFVININSGEVQAVKGIP--------------------KSLSV 242 (771)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~--~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~--------------------~~~~~ 242 (771)
..........+........|. ++....+++.....|.+||+.++......... .....
T Consensus 192 ~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (464)
T 3v7d_B 192 KGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA 271 (464)
T ss_dssp TTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSS
T ss_pred CCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccc
Confidence 221111122222233333444 34344556667789999999877533210000 00111
Q ss_pred ceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccc
Q 004149 243 GQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFF 321 (771)
Q Consensus 243 ~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~ 321 (771)
.-..++++++. |+..+ .+..|.++|+ .+++ ...+..+...+..
T Consensus 272 ~v~~~~~~~~~----l~~~~---------------~d~~i~vwd~-----------------~~~~~~~~~~~~~~~v~~ 315 (464)
T 3v7d_B 272 SVRTVSGHGNI----VVSGS---------------YDNTLIVWDV-----------------AQMKCLYILSGHTDRIYS 315 (464)
T ss_dssp CEEEEEEETTE----EEEEE---------------TTSCEEEEET-----------------TTTEEEEEECCCSSCEEE
T ss_pred eEEEEcCCCCE----EEEEe---------------CCCeEEEEEC-----------------CCCcEEEEecCCCCCEEE
Confidence 12345788876 66554 3347888898 4444 4556666777889
Q ss_pred eeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCC
Q 004149 322 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC 401 (771)
Q Consensus 322 p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~ 401 (771)
..|+|||+.|+..+.+. .|.+||+.+++........ ...+..+.|+ ++
T Consensus 316 ~~~~~~~~~l~sg~~dg-----------~i~vwd~~~~~~~~~~~~h-------------------~~~v~~~~~~--~~ 363 (464)
T 3v7d_B 316 TIYDHERKRCISASMDT-----------TIRIWDLENGELMYTLQGH-------------------TALVGLLRLS--DK 363 (464)
T ss_dssp EEEETTTTEEEEEETTS-----------CEEEEETTTTEEEEEECCC-------------------SSCEEEEEEC--SS
T ss_pred EEEcCCCCEEEEEeCCC-----------cEEEEECCCCcEEEEEeCC-------------------CCcEEEEEEc--CC
Confidence 99999999988776553 4889998876532111100 0123344565 45
Q ss_pred EEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 402 TMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 402 ~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
. +++...++...+ +|+.+++...............++++++.++... . ..+.+.++.++
T Consensus 364 ~-l~s~s~dg~v~v--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-d----g~i~iwd~~~g 422 (464)
T 3v7d_B 364 F-LVSAAADGSIRG--WDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-E----NQFNIYNLRSG 422 (464)
T ss_dssp E-EEEEETTSEEEE--EETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-T----TEEEEEETTTC
T ss_pred E-EEEEeCCCcEEE--EECCCCceeeeecCCCCccEEEEEeCCCEEEEec-C----CeEEEEECCCC
Confidence 4 455555655444 5777766554443333445568899988666544 2 36777776654
No 424
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.63 E-value=2.7e-06 Score=88.87 Aligned_cols=156 Identities=11% Similarity=0.032 Sum_probs=96.9
Q ss_pred ccceEEEeCC--CCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCC
Q 004149 99 TGASAVVPSP--SGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEP 174 (771)
Q Consensus 99 ~~~~~~~~SP--dG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~ 174 (771)
..+...+|+| +|++++..+..+ .+.+| ..++..++...... ..+.+++|+|||+.|+..+.
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s~dg-----~i~~wd~~~~~~~~~~~~~~~--------~~i~~~~~~pdg~~lasg~~-- 190 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWADNRG-----TIGFQSYEDDSQYIVHSAKSD--------VEYSSGVLHKDSLLLALYSP-- 190 (343)
T ss_dssp SCEEEEECCC---CCEEEEEETTC-----CEEEEESSSSCEEEEECCCSS--------CCCCEEEECTTSCEEEEECT--
T ss_pred CCEEEEEcCCCCCCCEEEEEeCCC-----cEEEEECCCCcEEEEEecCCC--------CceEEEEECCCCCEEEEEcC--
Confidence 3478899999 999998776543 34555 23333332222111 11368999999998887532
Q ss_pred CCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCcee--eccCCCCCCccceEEEecCCC
Q 004149 175 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ--AVKGIPKSLSVGQVVWAPLNE 252 (771)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~--~l~~~~~~~~~~~~~wspDg~ 252 (771)
...|.+||+.+++.. .+. ......+..+.|+|||+
T Consensus 191 ------------------------------------------dg~i~iwd~~~~~~~~~~~~-~~h~~~v~~l~fs~~g~ 227 (343)
T 3lrv_A 191 ------------------------------------------DGILDVYNLSSPDQASSRFP-VDEEAKIKEVKFADNGY 227 (343)
T ss_dssp ------------------------------------------TSCEEEEESSCTTSCCEECC-CCTTSCEEEEEECTTSS
T ss_pred ------------------------------------------CCEEEEEECCCCCCCccEEe-ccCCCCEEEEEEeCCCC
Confidence 368999999988764 442 11456788999999999
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eecCC---CCcccc--ceeecC
Q 004149 253 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTE---SISSAF--FPRFSP 326 (771)
Q Consensus 253 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt~---~~~~~~--~p~~Sp 326 (771)
. |+..+ .. .|.++|+ ..++. ..+.. +..... ...|+|
T Consensus 228 ~----l~s~~---------------~~-~v~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (343)
T 3lrv_A 228 W----MVVEC---------------DQ-TVVCFDL-----------------RKDVGTLAYPTYTIPEFKTGTVTYDIDD 270 (343)
T ss_dssp E----EEEEE---------------SS-BEEEEET-----------------TSSTTCBSSCCCBC-----CCEEEEECT
T ss_pred E----EEEEe---------------CC-eEEEEEc-----------------CCCCcceeecccccccccccceEEEECC
Confidence 7 77665 11 6888887 33332 22221 122222 499999
Q ss_pred CCCEEEEEecCCCCCCCCccccccceeeecCCC
Q 004149 327 DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 359 (771)
Q Consensus 327 DG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~ 359 (771)
||++|+..+..+ ..|.+|++..+
T Consensus 271 ~g~~l~~~s~~d----------~~i~v~~~~~~ 293 (343)
T 3lrv_A 271 SGKNMIAYSNES----------NSLTIYKFDKK 293 (343)
T ss_dssp TSSEEEEEETTT----------TEEEEEEECTT
T ss_pred CCCEEEEecCCC----------CcEEEEEEccc
Confidence 999998766522 24667776543
No 425
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.62 E-value=1.5e-06 Score=89.31 Aligned_cols=252 Identities=7% Similarity=-0.085 Sum_probs=131.9
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCe
Q 004149 46 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 125 (771)
Q Consensus 46 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 125 (771)
-|.+++||+.|.++... ...++.++. . +....+.... ......+++|||+.++. .. +...
T Consensus 49 gp~~~~~g~~l~~~d~~--------~~~i~~~~~--~-g~~~~~~~~~-----~~~~gl~~d~dG~l~v~-~~---~~~~ 108 (305)
T 3dr2_A 49 GPAWWEAQRTLVWSDLV--------GRRVLGWRE--D-GTVDVLLDAT-----AFTNGNAVDAQQRLVHC-EH---GRRA 108 (305)
T ss_dssp EEEEEGGGTEEEEEETT--------TTEEEEEET--T-SCEEEEEESC-----SCEEEEEECTTSCEEEE-ET---TTTE
T ss_pred CCeEeCCCCEEEEEECC--------CCEEEEEeC--C-CCEEEEeCCC-----CccceeeECCCCCEEEE-EC---CCCE
Confidence 34556788888876422 235666543 2 2333333222 44677899999985433 22 2235
Q ss_pred EEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCccccc
Q 004149 126 QFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 205 (771)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (771)
++.+...+..+.+........ ......+.++|||+ |++. +........ +.
T Consensus 109 v~~~~~~g~~~~~~~~~~~~~-----~~~~~~i~~d~dG~-l~~t-d~~~g~~~~-----------------------~~ 158 (305)
T 3dr2_A 109 ITRSDADGQAHLLVGRYAGKR-----LNSPNDLIVARDGA-IWFT-DPPFGLRKP-----------------------SQ 158 (305)
T ss_dssp EEEECTTSCEEEEECEETTEE-----CSCCCCEEECTTSC-EEEE-CCSGGGSCG-----------------------GG
T ss_pred EEEECCCCCEEEEEeccCCCc-----cCCCCCEEECCCCC-EEEe-CcCCCcccc-----------------------cc
Confidence 666664455444433211110 00124789999997 5443 110000000 00
Q ss_pred CCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEE
Q 004149 206 EDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 285 (771)
Q Consensus 206 ~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~ 285 (771)
.... ........||.+|.++++.+.+ . .......++|+|||+. |+++..... .+....|+++
T Consensus 159 ~~~~--~~~~~~~~v~~~d~~~g~~~~~--~-~~~~p~gl~~spdg~~----lyv~~~~~~---------~~~~~~i~~~ 220 (305)
T 3dr2_A 159 GCPA--DPELAHHSVYRLPPDGSPLQRM--A-DLDHPNGLAFSPDEQT----LYVSQTPEQ---------GHGSVEITAF 220 (305)
T ss_dssp SCCC--CCSSSCEEEEEECSSSCCCEEE--E-EESSEEEEEECTTSSE----EEEEECCC------------CCCEEEEE
T ss_pred cccc--ccccCCCeEEEEcCCCCcEEEE--e-cCCCCcceEEcCCCCE----EEEEecCCc---------CCCCCEEEEE
Confidence 0000 0011236899999988888777 3 3334567899999997 766542110 0012478888
Q ss_pred ecccccchhhhhhhhcCCCCCCcc---eec-CCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCC
Q 004149 286 RVSLYKSEASELELKESSSEDLPV---VNL-TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 361 (771)
Q Consensus 286 d~~~~~~~~~~~~~~~~~~~~~~~---~~l-t~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~ 361 (771)
++. ++.. +.+ ....+......+++||+ | |++... .|++++.++...
T Consensus 221 ~~~-----------------~~~l~~~~~~~~~~~~~pdgi~~d~~G~-l-wv~~~~-----------gv~~~~~~g~~~ 270 (305)
T 3dr2_A 221 AWR-----------------DGALHDRRHFASVPDGLPDGFCVDRGGW-L-WSSSGT-----------GVCVFDSDGQLL 270 (305)
T ss_dssp EEE-----------------TTEEEEEEEEECCSSSCCCSEEECTTSC-E-EECCSS-----------EEEEECTTSCEE
T ss_pred Eec-----------------CCCccCCeEEEECCCCCCCeEEECCCCC-E-EEecCC-----------cEEEECCCCCEE
Confidence 872 2111 111 11233455678899998 4 444321 388888643211
Q ss_pred CCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEEC
Q 004149 362 FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 420 (771)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~ 420 (771)
.. +..+ ..+..++|++|++.|++++. ..||++++
T Consensus 271 ~~-----------~~~~----------~~~~~~~f~~d~~~L~it~~----~~l~~~~~ 304 (305)
T 3dr2_A 271 GH-----------IPTP----------GTASNCTFDQAQQRLFITGG----PCLWMLPL 304 (305)
T ss_dssp EE-----------EECS----------SCCCEEEECTTSCEEEEEET----TEEEEEEC
T ss_pred EE-----------EECC----------CceeEEEEeCCCCEEEEEcC----CeEEEEEC
Confidence 11 1110 02456788999998887764 26887765
No 426
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.61 E-value=1.6e-06 Score=90.07 Aligned_cols=189 Identities=13% Similarity=-0.026 Sum_probs=105.8
Q ss_pred ceEEEEEccCCceeeccCCCCC----CccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccch
Q 004149 218 PSLFVININSGEVQAVKGIPKS----LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 293 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~----~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 293 (771)
..|+++|+.++++......... ..+..+++ ++++ |+...+. ....|+++|+
T Consensus 105 ~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~----lyv~~~~-------------~~~~v~viD~------ 159 (328)
T 3dsm_A 105 YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKY----VYVNCWS-------------YQNRILKIDT------ 159 (328)
T ss_dssp SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTE----EEEEECT-------------TCCEEEEEET------
T ss_pred CeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCE----EEEEcCC-------------CCCEEEEEEC------
Confidence 6899999999887543101110 14456666 5554 5544321 1237999998
Q ss_pred hhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEe
Q 004149 294 ASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIP 373 (771)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 373 (771)
.+++...............++|||+ +++.................|+++|..+++.. .
T Consensus 160 -----------~t~~~~~~i~~g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~----------~ 217 (328)
T 3dsm_A 160 -----------ETDKVVDELTIGIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFTVE----------K 217 (328)
T ss_dssp -----------TTTEEEEEEECSSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEE----------E
T ss_pred -----------CCCeEEEEEEcCCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCCeEE----------E
Confidence 5555433222233456788999998 55555432100000001257999998775531 1
Q ss_pred cccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEe--cCC-CCCceeeEEeecCCEEEEE
Q 004149 374 VVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI--TPA-ESNFSWSLLTLDGDNIIAV 450 (771)
Q Consensus 374 ~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l--~~~-~~~~~~~~~s~d~~~l~~~ 450 (771)
.+..+. + .....++|+||+++||++.. .++.+|.+++++... ... ........++|+++.|+.+
T Consensus 218 ~~~~~~-g-------~~p~~la~~~d~~~lyv~~~-----~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva 284 (328)
T 3dsm_A 218 QFKFKL-G-------DWPSEVQLNGTRDTLYWINN-----DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVA 284 (328)
T ss_dssp EEECCT-T-------CCCEEEEECTTSCEEEEESS-----SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEE
T ss_pred EEecCC-C-------CCceeEEEecCCCEEEEEcc-----EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEE
Confidence 111100 0 12346789999998877643 789999998886421 111 1223445677777777766
Q ss_pred E-eCCCCCCeEEEEEec
Q 004149 451 S-SSPVDVPQVKYGYFV 466 (771)
Q Consensus 451 ~-s~~~~p~~l~~~~~~ 466 (771)
. .+......|++++..
T Consensus 285 ~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 285 DAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp ECTTSSSEEEEEEECTT
T ss_pred cccccccCCEEEEECCC
Confidence 5 222345667777654
No 427
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.61 E-value=4.6e-06 Score=83.69 Aligned_cols=179 Identities=8% Similarity=-0.047 Sum_probs=108.7
Q ss_pred ceEEEEEccCCceeeccCCCCC-CccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhh
Q 004149 218 PSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 296 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~-~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 296 (771)
..|++++++++..+.+ .... ..+..++++|+++. |+++.. ....|+++++
T Consensus 58 ~~I~~~~~~g~~~~~~--~~~~~~~p~~ia~d~~~~~----lyv~d~--------------~~~~I~~~~~--------- 108 (267)
T 1npe_A 58 PSIGRASLHGGEPTTI--IRQDLGSPEGIALDHLGRT----IFWTDS--------------QLDRIEVAKM--------- 108 (267)
T ss_dssp TEEEEEESSSCCCEEE--ECTTCCCEEEEEEETTTTE----EEEEET--------------TTTEEEEEET---------
T ss_pred CEEEEEecCCCCcEEE--EECCCCCccEEEEEecCCe----EEEEEC--------------CCCEEEEEEc---------
Confidence 6899999988766555 2222 35678899998876 666541 2237899987
Q ss_pred hhhhcCCCCCCcceecCC-CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecc
Q 004149 297 LELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 375 (771)
Q Consensus 297 ~~~~~~~~~~~~~~~lt~-~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 375 (771)
++...+.+.. ........+++|++..|++..... ....|+++++++...+.+ ..
T Consensus 109 --------~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~--------~~~~I~~~~~dg~~~~~~-------~~-- 163 (267)
T 1npe_A 109 --------DGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR--------DNPKIETSHMDGTNRRIL-------AQ-- 163 (267)
T ss_dssp --------TSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS--------SSCEEEEEETTSCCCEEE-------EC--
T ss_pred --------CCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC--------CCcEEEEEecCCCCcEEE-------EE--
Confidence 4443333332 223466789999988888876431 124688888765332111 00
Q ss_pred cccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCC
Q 004149 376 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPV 455 (771)
Q Consensus 376 ~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~ 455 (771)
. ... ....+++++|++.||++.. +...|++++++++..+.+..... .-..++.+++.|+++....
T Consensus 164 -~--~~~-------~P~gia~d~~~~~lyv~d~--~~~~I~~~~~~g~~~~~~~~~~~--~P~gi~~d~~~lyva~~~~- 228 (267)
T 1npe_A 164 -D--NLG-------LPNGLTFDAFSSQLCWVDA--GTHRAECLNPAQPGRRKVLEGLQ--YPFAVTSYGKNLYYTDWKT- 228 (267)
T ss_dssp -T--TCS-------CEEEEEEETTTTEEEEEET--TTTEEEEEETTEEEEEEEEECCC--SEEEEEEETTEEEEEETTT-
T ss_pred -C--CCC-------CCcEEEEcCCCCEEEEEEC--CCCEEEEEecCCCceEEEecCCC--CceEEEEeCCEEEEEECCC-
Confidence 0 001 2346789999988887754 33578889987666555543222 1124566778877765432
Q ss_pred CCCeEEEEEecc
Q 004149 456 DVPQVKYGYFVD 467 (771)
Q Consensus 456 ~p~~l~~~~~~~ 467 (771)
.+|++++..+
T Consensus 229 --~~v~~~d~~~ 238 (267)
T 1npe_A 229 --NSVIAMDLAI 238 (267)
T ss_dssp --TEEEEEETTT
T ss_pred --CeEEEEeCCC
Confidence 3577776543
No 428
>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A
Probab=98.59 E-value=6.1e-08 Score=98.47 Aligned_cols=96 Identities=10% Similarity=0.004 Sum_probs=65.7
Q ss_pred CCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCC
Q 004149 536 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 615 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 615 (771)
..|.||++||.+++ ...|...+..|. +.|+++|+++... ...++++.+.+..++... ...
T Consensus 23 ~~~~l~~~hg~~~~--~~~~~~~~~~L~---~~v~~~d~~~~~~--------------~~~~~~~a~~~~~~i~~~-~~~ 82 (283)
T 3tjm_A 23 SERPLFLVHPIEGS--TTVFHSLASRLS---IPTYGLQCTRAAP--------------LDSIHSLAAYYIDCIRQV-QPE 82 (283)
T ss_dssp SSCCEEEECCTTCC--SGGGHHHHHHCS---SCEEEECCCTTSC--------------CSCHHHHHHHHHHHHTTT-CCS
T ss_pred CCCeEEEECCCCCC--HHHHHHHHHhcC---ceEEEEecCCCCC--------------CCCHHHHHHHHHHHHHHh-CCC
Confidence 45678999997665 456777777774 9999999965211 123445444433333331 123
Q ss_pred CeEEEEEcChhHHHHHHHHHhC---CCcee---EEEecCCcc
Q 004149 616 SKVTVVGGSHGGFLTTHLIGQA---PDKFV---AAAARNPLC 651 (771)
Q Consensus 616 ~ri~l~G~S~GG~~a~~~a~~~---p~~~~---a~v~~~p~~ 651 (771)
+++.|+||||||.+++.++.+. |+.+. .+++.++..
T Consensus 83 ~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~~ 124 (283)
T 3tjm_A 83 GPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGSP 124 (283)
T ss_dssp SCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCCT
T ss_pred CCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCCc
Confidence 6899999999999999998865 77787 888877643
No 429
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.57 E-value=8.3e-06 Score=84.57 Aligned_cols=150 Identities=9% Similarity=0.094 Sum_probs=89.8
Q ss_pred ceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhh
Q 004149 218 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 297 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 297 (771)
..|.++|++++++... ++....+..+.++|||+ ++++++...... .+ ......|+++|.
T Consensus 152 ~~v~viD~~t~~~~~~--i~~g~~p~~i~~~~dG~-----l~v~~~~~~~~~---~~-~~~~~~v~~id~---------- 210 (328)
T 3dsm_A 152 NRILKIDTETDKVVDE--LTIGIQPTSLVMDKYNK-----MWTITDGGYEGS---PY-GYEAPSLYRIDA---------- 210 (328)
T ss_dssp CEEEEEETTTTEEEEE--EECSSCBCCCEECTTSE-----EEEEBCCBCTTC---SS-CBCCCEEEEEET----------
T ss_pred CEEEEEECCCCeEEEE--EEcCCCccceEEcCCCC-----EEEEECCCccCC---cc-ccCCceEEEEEC----------
Confidence 6899999999886554 33334566788999997 666653221000 00 001247999997
Q ss_pred hhhcCCCCCCcce-ecCCC-CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecc
Q 004149 298 ELKESSSEDLPVV-NLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 375 (771)
Q Consensus 298 ~~~~~~~~~~~~~-~lt~~-~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 375 (771)
.+++.. .+.-. .......+|||||++|++... .|+++|..+++...... .
T Consensus 211 -------~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-------------~v~~~d~~t~~~~~~~~--------~ 262 (328)
T 3dsm_A 211 -------ETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-------------DIWRMPVEADRVPVRPF--------L 262 (328)
T ss_dssp -------TTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-------------SEEEEETTCSSCCSSCS--------B
T ss_pred -------CCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-------------EEEEEECCCCceeeeee--------e
Confidence 656543 33221 235678999999998876432 48999988766421100 0
Q ss_pred cccCCCCCcccccCCCCCCccccCCCEEEEEeee--CCeeEEEEEECCCCcEE
Q 004149 376 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW--GSSQVIISVNVSSGELL 426 (771)
Q Consensus 376 ~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~--~~~~~l~~~d~~tg~~~ 426 (771)
.. .. ..+..++++|++..|+++... .....|+++|.+ |++.
T Consensus 263 ~~--~~-------~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~ 305 (328)
T 3dsm_A 263 EF--RD-------TKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLI 305 (328)
T ss_dssp CC--CS-------SCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEE
T ss_pred cC--CC-------CceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEE
Confidence 00 00 123456789977778776521 345678888987 5543
No 430
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.55 E-value=8.5e-06 Score=85.60 Aligned_cols=87 Identities=20% Similarity=0.144 Sum_probs=50.4
Q ss_pred cccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccC---------CCCCccccc
Q 004149 318 SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAE---------GDCFPGLYS 388 (771)
Q Consensus 318 ~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~---------~~~f~g~~~ 388 (771)
......+||||++| |++++. ...|.++|+....... ++..+.... .....
T Consensus 322 ~pa~I~lS~DGrfL-YVSnrg---------~d~VavfdV~d~~~~~-------lv~~I~tGG~~~~~~~~~G~~~~---- 380 (462)
T 2ece_A 322 LVTDIDISLDDKFL-YLSLWG---------IGEVRQYDISNPFKPV-------LTGKVKLGGIFHRADHPAGHKLT---- 380 (462)
T ss_dssp CCCCEEECTTSCEE-EEEETT---------TTEEEEEECSSTTSCE-------EEEEEECBTTTTCBCCTTSCCCC----
T ss_pred ceeEEEECCCCCEE-EEEeCC---------CCEEEEEEecCCCCcE-------EEEEEEeCCeeccccccccccCC----
Confidence 46778999999986 566653 3568888875322211 111111110 01111
Q ss_pred CCCCCCccccCCCEEEEEee-----------eCCeeEEEEE--ECCCCcEE
Q 004149 389 SSILSNPWLSDGCTMLLSSI-----------WGSSQVIISV--NVSSGELL 426 (771)
Q Consensus 389 ~~~~~~~~s~dg~~l~~~~~-----------~~~~~~l~~~--d~~tg~~~ 426 (771)
.....+.+||||++||++.+ ......++.+ |.++| ++
T Consensus 381 ggPr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd~~~G-L~ 430 (462)
T 2ece_A 381 GAPQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNANPSGG-LE 430 (462)
T ss_dssp SCCCCEEECTTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEECTTSC-EE
T ss_pred CCCCEEEEcCCCCEEEEEcCCcccccccccCCCCceEEEEEEecCCCC-ce
Confidence 13467889999999988872 2334567755 66677 55
No 431
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.54 E-value=1e-05 Score=86.51 Aligned_cols=217 Identities=10% Similarity=-0.010 Sum_probs=122.2
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
.....++|+|+|+ | |+.+. ....+..++ .++....+.... .. ..++|+|||+.|+.....
T Consensus 131 ~~P~~la~d~~g~-l-yv~d~--~~~~I~~id~~~g~~~~~~~~~-~~----------~~ia~~~~g~~l~~~d~~---- 191 (409)
T 3hrp_A 131 KYMWGIAAVGNNT-V-LAYQR--DDPRVRLISVDDNKVTTVHPGF-KG----------GKPAVTKDKQRVYSIGWE---- 191 (409)
T ss_dssp CCEEEEEECSTTE-E-EEEET--TTTEEEEEETTTTEEEEEEETC-CB----------CBCEECTTSSEEEEEBSS----
T ss_pred CCceEEEEeCCCC-E-EEEec--CCCcEEEEECCCCEEEEeeccC-CC----------CceeEecCCCcEEEEecC----
Confidence 3466788999998 4 44443 234577776 445444443331 11 238999999977665321
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCcee-eccC-CC-CCCccceEEEecCCCCC
Q 004149 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ-AVKG-IP-KSLSVGQVVWAPLNEGL 254 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~-~l~~-~~-~~~~~~~~~wspDg~~~ 254 (771)
....|++++..++... .+.. .. ....+..++++|++..
T Consensus 192 --------------------------------------~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~- 232 (409)
T 3hrp_A 192 --------------------------------------GTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEW- 232 (409)
T ss_dssp --------------------------------------TTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSE-
T ss_pred --------------------------------------CCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCe-
Confidence 1137899998876542 2200 12 2335677899996665
Q ss_pred ccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceec----CCC-Cccc-c-ceeecCC
Q 004149 255 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL----TES-ISSA-F-FPRFSPD 327 (771)
Q Consensus 255 ~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l----t~~-~~~~-~-~p~~SpD 327 (771)
|++.. ....|+++|+ +++....+ ... .... . ..+|+|+
T Consensus 233 ---lyv~d---------------~~~~I~~~d~-----------------~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~ 277 (409)
T 3hrp_A 233 ---LYFVD---------------SNKNFGRFNV-----------------KTQEVTLIKQLELSGSLGTNPGPYLIYYFV 277 (409)
T ss_dssp ---EEEEC---------------TTCEEEEEET-----------------TTCCEEEEEECCCCSCCCCSSCCEEEEETT
T ss_pred ---EEEEE---------------CCCcEEEEEC-----------------CCCCEEEEecccccCCCCCCccccEEEeCC
Confidence 77632 2237999997 55544433 221 1122 3 7899998
Q ss_pred CCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcc--cc--cCCCCCCccccCCCEE
Q 004149 328 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPG--LY--SSSILSNPWLSDGCTM 403 (771)
Q Consensus 328 G~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g--~~--~~~~~~~~~s~dg~~l 403 (771)
+..|++.... ...|++++..+. ...+ .... ...+...| .. -..+..+++++||+ |
T Consensus 278 ~g~lyv~d~~----------~~~I~~~~~~g~-~~~~-------~g~~--~~~g~~dg~~~~~~~~~P~gia~d~dG~-l 336 (409)
T 3hrp_A 278 DSNFYMSDQN----------LSSVYKITPDGE-CEWF-------CGSA--TQKTVQDGLREEALFAQPNGMTVDEDGN-F 336 (409)
T ss_dssp TTEEEEEETT----------TTEEEEECTTCC-EEEE-------EECT--TCCSCBCEEGGGCBCSSEEEEEECTTCC-E
T ss_pred CCEEEEEeCC----------CCEEEEEecCCC-EEEE-------EeCC--CCCCcCCCcccccEeCCCeEEEEeCCCC-E
Confidence 7888776543 246888887643 1110 0000 00000000 00 01234678999998 6
Q ss_pred EEEeeeCCeeEEEEEECCCCcEEEecC
Q 004149 404 LLSSIWGSSQVIISVNVSSGELLRITP 430 (771)
Q Consensus 404 ~~~~~~~~~~~l~~~d~~tg~~~~l~~ 430 (771)
|++.. .+...|.++++.+|++..+..
T Consensus 337 yvad~-~~~~~I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 337 YIVDG-FKGYCLRKLDILDGYVSTVAG 362 (409)
T ss_dssp EEEET-TTTCEEEEEETTTTEEEEEEE
T ss_pred EEEeC-CCCCEEEEEECCCCEEEEEeC
Confidence 66532 145678889977888877653
No 432
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.53 E-value=3.7e-06 Score=87.22 Aligned_cols=233 Identities=10% Similarity=0.050 Sum_probs=126.4
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCe
Q 004149 46 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 125 (771)
Q Consensus 46 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 125 (771)
.|.+++|+..+.++... ...|+.++.. ++....+.. + ..+..++|+|||+.++.. . ..
T Consensus 53 gp~~~~~~~~l~~~d~~--------~~~i~~~d~~--~~~~~~~~~-~-----~~v~~i~~~~dg~l~v~~-~-----~g 110 (326)
T 2ghs_A 53 GPTFDPASGTAWWFNIL--------ERELHELHLA--SGRKTVHAL-P-----FMGSALAKISDSKQLIAS-D-----DG 110 (326)
T ss_dssp EEEEETTTTEEEEEEGG--------GTEEEEEETT--TTEEEEEEC-S-----SCEEEEEEEETTEEEEEE-T-----TE
T ss_pred CCeEeCCCCEEEEEECC--------CCEEEEEECC--CCcEEEEEC-C-----CcceEEEEeCCCeEEEEE-C-----CC
Confidence 34456677777765322 2467776642 223333321 1 346778899999876543 2 23
Q ss_pred EEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccc
Q 004149 126 QFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 204 (771)
Q Consensus 126 ~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (771)
++.++ .+++.+.+........ ...+..+.++|||+ |++.......
T Consensus 111 l~~~d~~~g~~~~~~~~~~~~~-----~~~~~~i~~d~~G~-l~v~~~~~~~---------------------------- 156 (326)
T 2ghs_A 111 LFLRDTATGVLTLHAELESDLP-----GNRSNDGRMHPSGA-LWIGTMGRKA---------------------------- 156 (326)
T ss_dssp EEEEETTTCCEEEEECSSTTCT-----TEEEEEEEECTTSC-EEEEEEETTC----------------------------
T ss_pred EEEEECCCCcEEEEeeCCCCCC-----CCCCCCEEECCCCC-EEEEeCCCcC----------------------------
Confidence 77777 5566555544321110 11235789999997 4443321100
Q ss_pred cCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEE
Q 004149 205 EEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYA 284 (771)
Q Consensus 205 ~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~ 284 (771)
......||+++ +++.+.+ .........++|+|||+. |++... ....|++
T Consensus 157 ---------~~~~~~l~~~~--~g~~~~~--~~~~~~~~~i~~s~dg~~----lyv~~~--------------~~~~I~~ 205 (326)
T 2ghs_A 157 ---------ETGAGSIYHVA--KGKVTKL--FADISIPNSICFSPDGTT----GYFVDT--------------KVNRLMR 205 (326)
T ss_dssp ---------CTTCEEEEEEE--TTEEEEE--EEEESSEEEEEECTTSCE----EEEEET--------------TTCEEEE
T ss_pred ---------CCCceEEEEEe--CCcEEEe--eCCCcccCCeEEcCCCCE----EEEEEC--------------CCCEEEE
Confidence 01236789998 5666665 222224567899999997 777641 2237899
Q ss_pred EecccccchhhhhhhhcCCCCCC-cc---e---ecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecC
Q 004149 285 VRVSLYKSEASELELKESSSEDL-PV---V---NLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 357 (771)
Q Consensus 285 ~d~~~~~~~~~~~~~~~~~~~~~-~~---~---~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~ 357 (771)
++++. .++ .. + .+...........+++||+ |+..... ...|+++|..
T Consensus 206 ~d~~~---------------~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~----------~~~v~~~d~~ 259 (326)
T 2ghs_A 206 VPLDA---------------RTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWG----------EGAVDRYDTD 259 (326)
T ss_dssp EEBCT---------------TTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEET----------TTEEEEECTT
T ss_pred EEccc---------------ccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeC----------CCEEEEECCC
Confidence 98720 133 21 1 1222234456678899997 3333322 1358888863
Q ss_pred CCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccc-cCCCEEEEEeeeCC
Q 004149 358 TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL-SDGCTMLLSSIWGS 411 (771)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s-~dg~~l~~~~~~~~ 411 (771)
++... .+..+. ..+..++|+ +|++.|++++...+
T Consensus 260 -g~~~~----------~i~~~~---------~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 260 -GNHIA----------RYEVPG---------KQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp -CCEEE----------EEECSC---------SBEEEEEEESTTSCEEEEEEBCTT
T ss_pred -CCEEE----------EEECCC---------CCcEEEEEecCCCCEEEEEecCCC
Confidence 32210 010000 113456787 89888888776543
No 433
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=98.52 E-value=2.4e-07 Score=81.71 Aligned_cols=82 Identities=17% Similarity=0.222 Sum_probs=54.2
Q ss_pred CcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCCCC
Q 004149 537 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 616 (771)
Q Consensus 537 ~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 616 (771)
.|+||++| +... .|... |+ .+|.|+++|+||. |.+... . . . .+++.+.+..+.+. ++.+
T Consensus 22 ~~~vv~~H-~~~~----~~~~~---l~-~~~~v~~~d~~G~---G~s~~~--~-~--~--~~~~~~~~~~~~~~--~~~~ 80 (131)
T 2dst_A 22 GPPVLLVA-EEAS----RWPEA---LP-EGYAFYLLDLPGY---GRTEGP--R-M--A--PEELAHFVAGFAVM--MNLG 80 (131)
T ss_dssp SSEEEEES-SSGG----GCCSC---CC-TTSEEEEECCTTS---TTCCCC--C-C--C--HHHHHHHHHHHHHH--TTCC
T ss_pred CCeEEEEc-CCHH----HHHHH---Hh-CCcEEEEECCCCC---CCCCCC--C-C--C--HHHHHHHHHHHHHH--cCCC
Confidence 47899999 2221 22222 44 4599999999994 433211 1 1 1 55555555555544 2456
Q ss_pred eEEEEEcChhHHHHHHHHHhCCC
Q 004149 617 KVTVVGGSHGGFLTTHLIGQAPD 639 (771)
Q Consensus 617 ri~l~G~S~GG~~a~~~a~~~p~ 639 (771)
++.++|||+||.+++.++.++|.
T Consensus 81 ~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 81 APWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp SCEEEECGGGGGGHHHHHHTTCC
T ss_pred ccEEEEEChHHHHHHHHHhcCCc
Confidence 89999999999999999999885
No 434
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.50 E-value=8.6e-06 Score=82.86 Aligned_cols=114 Identities=10% Similarity=-0.035 Sum_probs=60.8
Q ss_pred ceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeecc--
Q 004149 157 GISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-- 234 (771)
Q Consensus 157 ~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~-- 234 (771)
..+|||||+.++..+.+... | ....+.....|.+||+.+++...+.
T Consensus 231 ~vafSpdG~~lvs~s~~~~~----w----------------------------~laSGs~D~tIklWd~~tgk~l~v~~~ 278 (356)
T 2w18_A 231 HKAYSEMGLLFIVLSHPCAK----E----------------------------SESLRSPVFQLIVINPKTTLSVGVMLY 278 (356)
T ss_dssp EEEEEETTEEEEEEC--------------------------------------------CCEEEEEEETTTTEEEEEEEE
T ss_pred EEEECCCCCEEEEeccCCCc----c----------------------------eeeccCCCcEEEEEECCCCEEEEEEEe
Confidence 55899999988776542210 0 1122345678899999998765431
Q ss_pred CCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eecC
Q 004149 235 GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLT 313 (771)
Q Consensus 235 ~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt 313 (771)
..+.........-+.+|.. ++-.+ .+..|.++|+ .+++. ..|.
T Consensus 279 ~~p~Gh~~~~lsg~~sg~~----lASgS---------------~DgTIkIWDl-----------------~tGk~l~tL~ 322 (356)
T 2w18_A 279 CLPPGQAGRFLEGDVKDHC----AAAIL---------------TSGTIAIWDL-----------------LLGQCTALLP 322 (356)
T ss_dssp CCCTTCCCCEEEEEEETTE----EEEEE---------------TTSCEEEEET-----------------TTCSEEEEEC
T ss_pred eccCCCcceeEccccCCCE----EEEEc---------------CCCcEEEEEC-----------------CCCcEEEEec
Confidence 0011111011111222333 33222 3347889998 66654 5566
Q ss_pred CCCcccc-ceeecCCCCEEEEEecCC
Q 004149 314 ESISSAF-FPRFSPDGKFLVFLSAKS 338 (771)
Q Consensus 314 ~~~~~~~-~p~~SpDG~~l~f~~~~~ 338 (771)
.+...+. ..+|||||++|+..+.+.
T Consensus 323 gH~~~vvs~vafSPDG~~LaSGS~D~ 348 (356)
T 2w18_A 323 PVSDQHWSFVKWSGTDSHLLAGQKDG 348 (356)
T ss_dssp CC--CCCCEEEECSSSSEEEEECTTS
T ss_pred CCCCCeEEEEEECCCCCEEEEEECCC
Confidence 5554444 589999999998777553
No 435
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.48 E-value=8.3e-06 Score=83.00 Aligned_cols=231 Identities=10% Similarity=0.031 Sum_probs=111.9
Q ss_pred ccccceEEEeCCC----CCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEec
Q 004149 97 EMTGASAVVPSPS----GSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAE 172 (771)
Q Consensus 97 ~~~~~~~~~~SPd----G~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~ 172 (771)
+...+...++||| |+.++-.... ..++.+ .++ +.+.....+. |+.+....+||||+.++-..-
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~----~~v~~l-~~g--~lv~ss~~g~------d~~V~~~~~s~dG~~~~s~~~ 176 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNI----KAVLGL-TKR--RLVSSSGTLS------DQQVEVMTFAEDGGGKENQFL 176 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEE----EEEEEE-TTT--EEEEEESSST------TCEEEEEEECTTSCEEEEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCCe----EEEEec-CCC--cEEEecccCC------CCcEEEEEECCCCceeeeecc
Confidence 3346778889999 8888763321 112222 222 2222211111 223367889999987764322
Q ss_pred CCCCCCCCccCCCCCCCCCCccCCCCCCcccccC--CcCccc-CCccCceEEEEEccCCceee-ccCCC-CCCccceEEE
Q 004149 173 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE--DWGETY-AGKRQPSLFVININSGEVQA-VKGIP-KSLSVGQVVW 247 (771)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~g~~~-~~~~~~~l~v~d~~~~~~~~-l~~~~-~~~~~~~~~w 247 (771)
... ......|++ +-++.+ .+..+..|.+||+++|+... +.+.. ....+...+|
T Consensus 177 ~~~----------------------~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vaf 234 (356)
T 2w18_A 177 MPP----------------------EETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAY 234 (356)
T ss_dssp CCC----------------------SSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEE
T ss_pred CCC----------------------ceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEE
Confidence 111 011222333 112333 34567899999999998544 42111 1124556689
Q ss_pred ecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecC------CCCccccc
Q 004149 248 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT------ESISSAFF 321 (771)
Q Consensus 248 spDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt------~~~~~~~~ 321 (771)
||||+. ++..+...... ..........|.++|. .++...... .+.....+
T Consensus 235 SpdG~~----lvs~s~~~~~w---~laSGs~D~tIklWd~-----------------~tgk~l~v~~~~~p~Gh~~~~ls 290 (356)
T 2w18_A 235 SEMGLL----FIVLSHPCAKE---SESLRSPVFQLIVINP-----------------KTTLSVGVMLYCLPPGQAGRFLE 290 (356)
T ss_dssp EETTEE----EEEEC---------------CCEEEEEEET-----------------TTTEEEEEEEECCCTTCCCCEEE
T ss_pred CCCCCE----EEEeccCCCcc---eeeccCCCcEEEEEEC-----------------CCCEEEEEEEeeccCCCcceeEc
Confidence 999987 76655311100 0001123346666776 555432211 11111111
Q ss_pred eeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCC
Q 004149 322 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC 401 (771)
Q Consensus 322 p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~ 401 (771)
.. .+|..++-.+.+ ..|.+||+.+++......+.. ......++|||||+
T Consensus 291 g~--~sg~~lASgS~D-----------gTIkIWDl~tGk~l~tL~gH~------------------~~vvs~vafSPDG~ 339 (356)
T 2w18_A 291 GD--VKDHCAAAILTS-----------GTIAIWDLLLGQCTALLPPVS------------------DQHWSFVKWSGTDS 339 (356)
T ss_dssp EE--EETTEEEEEETT-----------SCEEEEETTTCSEEEEECCC--------------------CCCCEEEECSSSS
T ss_pred cc--cCCCEEEEEcCC-----------CcEEEEECCCCcEEEEecCCC------------------CCeEEEEEECCCCC
Confidence 22 225555554443 359999999877532211110 00122368999999
Q ss_pred EEEEEeeeCCeeEEEEE
Q 004149 402 TMLLSSIWGSSQVIISV 418 (771)
Q Consensus 402 ~l~~~~~~~~~~~l~~~ 418 (771)
+| ++.+.++..+||.+
T Consensus 340 ~L-aSGS~D~TIklWd~ 355 (356)
T 2w18_A 340 HL-LAGQKDGNIFVYHY 355 (356)
T ss_dssp EE-EEECTTSCEEEEEE
T ss_pred EE-EEEECCCcEEEecC
Confidence 65 56677788888853
No 436
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.47 E-value=2.8e-06 Score=86.74 Aligned_cols=201 Identities=12% Similarity=0.048 Sum_probs=114.2
Q ss_pred cceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccC
Q 004149 156 EGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG 235 (771)
Q Consensus 156 ~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~ 235 (771)
.++.|+|++..|+++.. ....|+++|.++++.+.+.
T Consensus 16 Egp~w~~~~~~l~~~d~-------------------------------------------~~~~i~~~d~~~~~~~~~~- 51 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDI-------------------------------------------PAKKVCRWDSFTKQVQRVT- 51 (297)
T ss_dssp EEEEEETTTTEEEEEET-------------------------------------------TTTEEEEEETTTCCEEEEE-
T ss_pred cCCeEECCCCEEEEEEC-------------------------------------------CCCEEEEEECCCCcEEEEe-
Confidence 58999999888888632 2368999999988776552
Q ss_pred CCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCC
Q 004149 236 IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES 315 (771)
Q Consensus 236 ~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~ 315 (771)
....+..++++|||+ |++.. ...|+++|+ ++++.+.+...
T Consensus 52 --~~~~~~~i~~~~dG~-----l~v~~----------------~~~l~~~d~-----------------~~g~~~~~~~~ 91 (297)
T 3g4e_A 52 --MDAPVSSVALRQSGG-----YVATI----------------GTKFCALNW-----------------KEQSAVVLATV 91 (297)
T ss_dssp --CSSCEEEEEEBTTSS-----EEEEE----------------TTEEEEEET-----------------TTTEEEEEEEC
T ss_pred --CCCceEEEEECCCCC-----EEEEE----------------CCeEEEEEC-----------------CCCcEEEEEec
Confidence 223577889999998 44433 126888987 66665554322
Q ss_pred -----CccccceeecCCCCEEEEEecCCCCCCC-CccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccC
Q 004149 316 -----ISSAFFPRFSPDGKFLVFLSAKSSVDSG-AHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSS 389 (771)
Q Consensus 316 -----~~~~~~p~~SpDG~~l~f~~~~~~~~~g-~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~ 389 (771)
.......+++|||+ |++.......... .......||+++..+ ....+... . .
T Consensus 92 ~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~-------~------~------- 149 (297)
T 3g4e_A 92 DNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQ-------V------D------- 149 (297)
T ss_dssp CTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEE-------E------S-------
T ss_pred CCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCC-CEEEEeec-------c------c-------
Confidence 12356788999999 5565533210000 001234688887542 22111000 0 0
Q ss_pred CCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEE--E-ecC-C--CCCceeeEEeecCCEEEEEEeCCCCCCeEEEE
Q 004149 390 SILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELL--R-ITP-A--ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYG 463 (771)
Q Consensus 390 ~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~--~-l~~-~--~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~ 463 (771)
....++|+|||+.||++....+....|.++..+|.+. + +.. . ........++++|+ |+++.... .+|+++
T Consensus 150 ~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~---~~v~~~ 225 (297)
T 3g4e_A 150 ISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNG---GRVIRL 225 (297)
T ss_dssp BEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETT---TEEEEE
T ss_pred cccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCC---CEEEEE
Confidence 1236789999998888766554444443444677653 1 211 1 12223345666664 44444322 346666
Q ss_pred Eec
Q 004149 464 YFV 466 (771)
Q Consensus 464 ~~~ 466 (771)
+..
T Consensus 226 d~~ 228 (297)
T 3g4e_A 226 DPV 228 (297)
T ss_dssp CTT
T ss_pred cCC
Confidence 543
No 437
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.45 E-value=1.4e-05 Score=86.72 Aligned_cols=302 Identities=9% Similarity=-0.019 Sum_probs=155.4
Q ss_pred hhcccceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecC
Q 004149 65 LLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVP 142 (771)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 142 (771)
+..+...+.+.+|++.... ....+. ...+.+....|+ ++.++..+..+ .+.+| ..++........
T Consensus 132 l~sg~~dg~i~vwd~~~~~-~~~~~~-----~h~~~v~~~~~~--~~~l~s~~~dg-----~i~vwd~~~~~~~~~~~~h 198 (445)
T 2ovr_B 132 IVSGSDDNTLKVWSAVTGK-CLRTLV-----GHTGGVWSSQMR--DNIIISGSTDR-----TLKVWNAETGECIHTLYGH 198 (445)
T ss_dssp EEEEETTSCEEEEETTTCC-EEEECC-----CCSSCEEEEEEE--TTEEEEEETTS-----CEEEEETTTTEEEEEECCC
T ss_pred EEEEECCCcEEEEECCCCc-EEEEEc-----CCCCCEEEEEec--CCEEEEEeCCC-----eEEEEECCcCcEEEEECCC
Confidence 3334455677777764321 112221 122457777787 55676654433 45555 233333222211
Q ss_pred CcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEE
Q 004149 143 QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFV 222 (771)
Q Consensus 143 ~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v 222 (771)
. + .+.++.|+ ++.|+..+.+.... .|+............+........+ +....+++.....|.+
T Consensus 199 ~---~------~v~~~~~~--~~~l~s~s~dg~i~--~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i 263 (445)
T 2ovr_B 199 T---S------TVRCMHLH--EKRVVSGSRDATLR--VWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV 263 (445)
T ss_dssp S---S------CEEEEEEE--TTEEEEEETTSEEE--EEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEE
T ss_pred C---C------cEEEEEec--CCEEEEEeCCCEEE--EEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEE
Confidence 1 1 12466664 56677766554322 2222111111111112222222333 3344556666789999
Q ss_pred EEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcC
Q 004149 223 ININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKES 302 (771)
Q Consensus 223 ~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 302 (771)
||+.+++..... ......+..+.| |++. |+..+ .+..|.++|+
T Consensus 264 wd~~~~~~~~~~-~~~~~~v~~~~~--~~~~----l~~~~---------------~d~~i~i~d~--------------- 306 (445)
T 2ovr_B 264 WDPETETCLHTL-QGHTNRVYSLQF--DGIH----VVSGS---------------LDTSIRVWDV--------------- 306 (445)
T ss_dssp EEGGGTEEEEEE-CCCSSCEEEEEE--CSSE----EEEEE---------------TTSCEEEEET---------------
T ss_pred EECCCCcEeEEe-cCCCCceEEEEE--CCCE----EEEEe---------------CCCeEEEEEC---------------
Confidence 999988765441 223345666666 7776 66554 3347888887
Q ss_pred CCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCC
Q 004149 303 SSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGD 381 (771)
Q Consensus 303 ~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (771)
.+++ ...+..+...+.. ++++|+.|+..+.+ ..|.+||+.+++.... +.....
T Consensus 307 --~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~d-----------g~i~vwd~~~~~~~~~----------~~~~~~- 360 (445)
T 2ovr_B 307 --ETGNCIHTLTGHQSLTSG--MELKDNILVSGNAD-----------STVKIWDIKTGQCLQT----------LQGPNK- 360 (445)
T ss_dssp --TTCCEEEEECCCCSCEEE--EEEETTEEEEEETT-----------SCEEEEETTTCCEEEE----------ECSTTS-
T ss_pred --CCCCEEEEEcCCcccEEE--EEEeCCEEEEEeCC-----------CeEEEEECCCCcEEEE----------EccCCC-
Confidence 4444 3445444444443 44567877766644 3588999877553211 100000
Q ss_pred CCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec------CCCCCceeeEEeecCCEEEEEEeCCC
Q 004149 382 CFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT------PAESNFSWSLLTLDGDNIIAVSSSPV 455 (771)
Q Consensus 382 ~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~------~~~~~~~~~~~s~d~~~l~~~~s~~~ 455 (771)
....+..++| +++. +++...++...+ +|+.+++..... ...+.+....|++++..++....+.+
T Consensus 361 -----~~~~v~~~~~--~~~~-l~s~~~dg~v~i--wd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 361 -----HQSAVTCLQF--NKNF-VITSSDDGTVKL--WDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp -----CSSCEEEEEE--CSSE-EEEEETTSEEEE--EETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred -----CCCCEEEEEE--CCCE-EEEEeCCCeEEE--EECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCC
Confidence 0012234455 4554 455555555444 578788755432 12223445677888776666666666
Q ss_pred CCCeEEEEEecc
Q 004149 456 DVPQVKYGYFVD 467 (771)
Q Consensus 456 ~p~~l~~~~~~~ 467 (771)
.+..+++.++..
T Consensus 431 ~~~~l~v~df~~ 442 (445)
T 2ovr_B 431 EETKLLVLDFDV 442 (445)
T ss_dssp SCCEEEEEECCC
T ss_pred CccEEEEEECCC
Confidence 678888888753
No 438
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.41 E-value=2.5e-05 Score=84.34 Aligned_cols=168 Identities=11% Similarity=0.110 Sum_probs=97.6
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEec--CC--------cceEEEecCCcccccccCCCcccceeecCC-CCeEE
Q 004149 100 GASAVVPSPSGSKLLVVRNPENESPIQFELWS--QS--------QLEKEFHVPQTVHGSVYADGWFEGISWNSD-ETLIA 168 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~--~~--------~~~~~~~~~~~~~g~~~~~~~~~~~~wSpD-g~~la 168 (771)
.+...+|||||++||...... .......+|+ .+ +.........+..+ .+.+++|+|+ ++.|+
T Consensus 94 ~v~~l~~spdg~~lav~~~sg-s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~------~V~~v~~~p~~~~~la 166 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSS-EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGG------MVIDMKWNPTVPSMVA 166 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEET-TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGG------SEEEEEECSSCTTEEE
T ss_pred cccEEEEcCCCCEEEEEEecc-CCCceEEEEEccccccCCcCCcceeeeeeccCCCCC------ceEEEEECCCCCCEEE
Confidence 478899999999998632111 1122444552 11 11111222111111 2368999998 66666
Q ss_pred EEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEe
Q 004149 169 YVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWA 248 (771)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~ws 248 (771)
..+. +..|.+||+.++...... ......+..++||
T Consensus 167 s~s~--------------------------------------------Dg~v~iwD~~~~~~~~~~-~~~~~~v~~v~ws 201 (434)
T 2oit_A 167 VCLA--------------------------------------------DGSIAVLQVTETVKVCAT-LPSTVAVTSVCWS 201 (434)
T ss_dssp EEET--------------------------------------------TSCEEEEEESSSEEEEEE-ECGGGCEEEEEEC
T ss_pred EEEC--------------------------------------------CCeEEEEEcCCCcceeec-cCCCCceeEEEEc
Confidence 6543 257899999887543221 2234467889999
Q ss_pred cCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCC-------CCccccc
Q 004149 249 PLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-------SISSAFF 321 (771)
Q Consensus 249 pDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~-------~~~~~~~ 321 (771)
|||+. |+..+ .+..|.++|+ .+.....+.. +...+.+
T Consensus 202 pdg~~----lasgs---------------~dg~v~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~v~~ 245 (434)
T 2oit_A 202 PKGKQ----LAVGK---------------QNGTVVQYLP-----------------TLQEKKVIPCPPFYESDHPVRVLD 245 (434)
T ss_dssp TTSSC----EEEEE---------------TTSCEEEECT-----------------TCCEEEEECCCTTCCTTSCEEEEE
T ss_pred CCCCE----EEEEc---------------CCCcEEEEcc-----------------CCcccccccCCcccCCCCceeEEE
Confidence 99998 88766 2336888886 3222222221 1236788
Q ss_pred eeecCCCCEEEEEecCCCCCCCCccccccceeeecCCC
Q 004149 322 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 359 (771)
Q Consensus 322 p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~ 359 (771)
..|++++..++..+..+ |.......+.++++...
T Consensus 246 v~w~~~~~~l~~~~~~d----g~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 246 VLWIGTYVFAIVYAAAD----GTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEETTEEEEEEEETT----CCSSSCCEEEEEECCCT
T ss_pred EEEecCceEEEEEccCC----CccCCCCceEEEEeccC
Confidence 99999998876555443 21122345778887654
No 439
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.39 E-value=5.5e-06 Score=89.53 Aligned_cols=94 Identities=14% Similarity=0.096 Sum_probs=59.6
Q ss_pred CceEEEEEccCC-----ce------eeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEE
Q 004149 217 QPSLFVININSG-----EV------QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 285 (771)
Q Consensus 217 ~~~l~v~d~~~~-----~~------~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~ 285 (771)
...|.+||+.++ +. ..+. ......+..++|+|++.. ++.++. .+..|.++
T Consensus 117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~~p~~~~----~las~s--------------~Dg~v~iw 177 (434)
T 2oit_A 117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLL-KDAGGMVIDMKWNPTVPS----MVAVCL--------------ADGSIAVL 177 (434)
T ss_dssp EEEEEEEEHHHHHCTTCSSCCCSEEEECC-CSGGGSEEEEEECSSCTT----EEEEEE--------------TTSCEEEE
T ss_pred CceEEEEEccccccCCcCCcceeeeeecc-CCCCCceEEEEECCCCCC----EEEEEE--------------CCCeEEEE
Confidence 468999998764 11 1110 122446789999999544 544441 23368888
Q ss_pred ecccccchhhhhhhhcCCCCCCcce-ecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecC
Q 004149 286 RVSLYKSEASELELKESSSEDLPVV-NLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 357 (771)
Q Consensus 286 d~~~~~~~~~~~~~~~~~~~~~~~~-~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~ 357 (771)
|+ .++... ....+...+...+|||||++|+..+.+. .|.+||..
T Consensus 178 D~-----------------~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg-----------~v~iwd~~ 222 (434)
T 2oit_A 178 QV-----------------TETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNG-----------TVVQYLPT 222 (434)
T ss_dssp EE-----------------SSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTS-----------CEEEECTT
T ss_pred Ec-----------------CCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCC-----------cEEEEccC
Confidence 87 444322 2223345688899999999998877553 48888876
No 440
>2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus}
Probab=98.37 E-value=1.2e-06 Score=93.02 Aligned_cols=107 Identities=13% Similarity=0.083 Sum_probs=66.9
Q ss_pred CCcEEEEEcCCCCCC------CCCcch----HHHHHHHHCCcEEEEECCCCCCCCChhhhhcC---------CCCcc---
Q 004149 536 CDPLIVVLHGGPHSV------SLSSYS----KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL---------PGKVG--- 593 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~------~~~~~~----~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~---------~~~~~--- 593 (771)
..|.||++||..... ....|. .++..|+++||.|+++|++| +|.+..... .+..+
T Consensus 51 ~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G---~G~S~~~~~~l~~~i~~g~g~sg~~~ 127 (431)
T 2hih_A 51 NKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSA---LASNHERAVELYYYLKGGRVDYGAAH 127 (431)
T ss_dssp CSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCS---SSCHHHHHHHHHHHHHCEEEECCHHH
T ss_pred CCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCC---CCCCccchHHhhhhhhhccccccccc
Confidence 456799999965431 123443 47888999999999999999 443321000 00000
Q ss_pred ------ccchhhHHHHHHHHHHcCCCC-CCeEEEEEcChhHHHHHHHHHh--------------------------CCCc
Q 004149 594 ------SQDVNDVLTAIDHVIDMGLAN-PSKVTVVGGSHGGFLTTHLIGQ--------------------------APDK 640 (771)
Q Consensus 594 ------~~~~~D~~~~i~~l~~~~~~d-~~ri~l~G~S~GG~~a~~~a~~--------------------------~p~~ 640 (771)
....+|+.+.++ . .. .+++.|+||||||.++..++.. +|++
T Consensus 128 ~~~~~~~~~a~dl~~ll~----~--l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~ 201 (431)
T 2hih_A 128 SEKYGHERYGKTYEGVLK----D--WKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNM 201 (431)
T ss_dssp HHHHTCCSEEEEECCSCT----T--CBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSC
T ss_pred cccCCHHHHHHHHHHHHH----H--hCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccc
Confidence 000111111111 1 11 3789999999999999998865 6889
Q ss_pred eeEEEecCCcc
Q 004149 641 FVAAAARNPLC 651 (771)
Q Consensus 641 ~~a~v~~~p~~ 651 (771)
++.+|++++..
T Consensus 202 V~slv~i~tP~ 212 (431)
T 2hih_A 202 VTSITTIATPH 212 (431)
T ss_dssp EEEEEEESCCT
T ss_pred eeEEEEECCCC
Confidence 99999888754
No 441
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.36 E-value=6.2e-06 Score=89.79 Aligned_cols=114 Identities=11% Similarity=0.061 Sum_probs=69.1
Q ss_pred ccceEEEeCC-----CCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCC--cccccccCCCcccceee-c-CCCCeEE
Q 004149 99 TGASAVVPSP-----SGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQ--TVHGSVYADGWFEGISW-N-SDETLIA 168 (771)
Q Consensus 99 ~~~~~~~~SP-----dG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~w-S-pDg~~la 168 (771)
+..-+|..|. ||+++ |+.+. .+..+-+++ +..+..+++.++. +.| ++.+ + ||+++|+
T Consensus 85 gd~hh~~~s~t~g~~DG~~l-fVnd~--~~~rVavIdl~t~~~~~ii~ip~g~~ph----------g~~~~~~p~~~~v~ 151 (595)
T 1fwx_A 85 GDLHHVHMSFTEGKYDGRFL-FMNDK--ANTRVARVRCDVMKCDAILEIPNAKGIH----------GLRPQKWPRSNYVF 151 (595)
T ss_dssp CCBCCEEEEEETTEEEEEEE-EEEET--TTTEEEEEETTTTEEEEEEECSSCCSEE----------EEEECCSSBCSEEE
T ss_pred CCCCccccCCCCCCcCCCEE-EEEcC--CCCEEEEEECCCceEeeEEeCCCCCCCc----------ceeeeecCCCcEEE
Confidence 4455688888 99988 55332 456788888 6667777777653 333 6676 6 9999986
Q ss_pred EEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEe
Q 004149 169 YVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWA 248 (771)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~ws 248 (771)
...+...+-.+ . +..++..+ .....+-++|.++.++..- .+-.........|
T Consensus 152 ~~~~~~~p~~~--------d-----------g~~l~~~~-------~~~~~vtvID~~t~~v~~q--I~Vgg~pd~~~~s 203 (595)
T 1fwx_A 152 CNGEDETPLVN--------D-----------GTNMEDVA-------NYVNVFTAVDADKWEVAWQ--VLVSGNLDNCDAD 203 (595)
T ss_dssp EEECSCEESSC--------S-----------SSSTTCGG-------GEEEEEEEEETTTTEEEEE--EEESSCCCCEEEC
T ss_pred EecccccccCC--------C-----------Cccccccc-------ccCceEEEEECCCCeEEEE--EEeCCCccceEEC
Confidence 55443321100 0 01111111 1346889999998876443 2222245678899
Q ss_pred cCCCC
Q 004149 249 PLNEG 253 (771)
Q Consensus 249 pDg~~ 253 (771)
|||++
T Consensus 204 pdGk~ 208 (595)
T 1fwx_A 204 YEGKW 208 (595)
T ss_dssp SSSSE
T ss_pred CCCCE
Confidence 99995
No 442
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.36 E-value=7e-05 Score=76.69 Aligned_cols=196 Identities=10% Similarity=0.021 Sum_probs=104.4
Q ss_pred ceEEEEEccCCceeec-cCCCC---CCccceEEEecCCCCCccEEEEEeecCcceeeeee-eeccCCceeEEEecccccc
Q 004149 218 PSLFVININSGEVQAV-KGIPK---SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIK-YCYNRPCALYAVRVSLYKS 292 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l-~~~~~---~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~l~~~d~~~~~~ 292 (771)
..|+++|.+ ++.+.+ ..... ...+..++++|||+ |+++..........+. ........||.++.
T Consensus 92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-----l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~----- 160 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-----LWITAPAGEVAPADYTRSMQEKFGSIYCFTT----- 160 (314)
T ss_dssp TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-----EEEEECBCBCTTSCCCBTTSSSCEEEEEECT-----
T ss_pred CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-----EEEEecCcccccccccccccCCCCeEEEECC-----
Confidence 368899988 776654 21111 12467889999986 7666532100000000 00011247888886
Q ss_pred hhhhhhhhcCCCCCCcceecCCCCccccceeec----CCCCEEEEEecCCCCCCCCccccccceeeecC-CCCCCCCccc
Q 004149 293 EASELELKESSSEDLPVVNLTESISSAFFPRFS----PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP-TNGNFSSLEK 367 (771)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~S----pDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~-~~~~~~~~~~ 367 (771)
+ ++.+.+...........|+ |||+.|++..... ..|+++|++ ++....
T Consensus 161 ------------~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~----------~~i~~~~~~~~g~~~~---- 213 (314)
T 1pjx_A 161 ------------D-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPT----------KKLWSYDIKGPAKIEN---- 213 (314)
T ss_dssp ------------T-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTT----------TEEEEEEEEETTEEEE----
T ss_pred ------------C-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCC----------CeEEEEECCCCCcccc----
Confidence 4 5444443333335677899 9999877665432 468888875 222100
Q ss_pred eeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcE-EEecCCCCCceeeEEeecCCE
Q 004149 368 IVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL-LRITPAESNFSWSLLTLDGDN 446 (771)
Q Consensus 368 ~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~-~~l~~~~~~~~~~~~s~d~~~ 446 (771)
..+...+ .. ..+ ..+..+++++||+ |+++.... ..|+++|.++++. ..+...........++++++.
T Consensus 214 -~~~~~~~--~~-~~~-----~~p~~i~~d~~G~-l~v~~~~~--~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~ 281 (314)
T 1pjx_A 214 -KKVWGHI--PG-THE-----GGADGMDFDEDNN-LLVANWGS--SHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKT 281 (314)
T ss_dssp -EEEEEEC--CC-CSS-----CEEEEEEEBTTCC-EEEEEETT--TEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSE
T ss_pred -ceEEEEC--CC-CCC-----CCCCceEECCCCC-EEEEEcCC--CEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCE
Confidence 0000000 00 000 0123567888986 55554322 3688889886654 334333233445667888887
Q ss_pred EEEEEeCCCCCCeEEEEEec
Q 004149 447 IIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 447 l~~~~s~~~~p~~l~~~~~~ 466 (771)
|++..... ..|+++++.
T Consensus 282 l~v~~~~~---~~l~~~~~~ 298 (314)
T 1pjx_A 282 IFVTEHEN---NAVWKFEWQ 298 (314)
T ss_dssp EEEEETTT---TEEEEEECS
T ss_pred EEEEeCCC---CeEEEEeCC
Confidence 77766432 467777754
No 443
>2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A
Probab=98.30 E-value=2.4e-06 Score=89.28 Aligned_cols=103 Identities=15% Similarity=0.174 Sum_probs=65.0
Q ss_pred CCcEEEEEcCCCCCCCC-----Ccch----HHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHH
Q 004149 536 CDPLIVVLHGGPHSVSL-----SSYS----KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDH 606 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~-----~~~~----~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~ 606 (771)
..+.||++||....... ..|. ..++.|+++||.|+++|++| +|.+... ..++...++.
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g---~G~s~~~----------a~~l~~~i~~ 71 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGP---LSSNWDR----------ACEAYAQLVG 71 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCS---SBCHHHH----------HHHHHHHHHC
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCC---CCCcccc----------HHHHHHHHHh
Confidence 34569999996554211 1243 34588999999999999998 4433210 1122222221
Q ss_pred --------HHHc---------------CCCCCCeEEEEEcChhHHHHHHHHHh-------------------CC------
Q 004149 607 --------VIDM---------------GLANPSKVTVVGGSHGGFLTTHLIGQ-------------------AP------ 638 (771)
Q Consensus 607 --------l~~~---------------~~~d~~ri~l~G~S~GG~~a~~~a~~-------------------~p------ 638 (771)
+.+. .....+++.|+||||||.++..++.+ +|
T Consensus 72 ~~vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~ 151 (387)
T 2dsn_A 72 GTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGH 151 (387)
T ss_dssp EEEECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCC
T ss_pred hhhhhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccc
Confidence 1000 00235789999999999999999872 35
Q ss_pred CceeEEEecCCcc
Q 004149 639 DKFVAAAARNPLC 651 (771)
Q Consensus 639 ~~~~a~v~~~p~~ 651 (771)
++++.+|++++..
T Consensus 152 ~~V~sLV~i~tP~ 164 (387)
T 2dsn_A 152 HFVLSVTTIATPH 164 (387)
T ss_dssp CCEEEEEEESCCT
T ss_pred cceeEEEEECCCC
Confidence 6889999887643
No 444
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.30 E-value=0.00013 Score=74.99 Aligned_cols=229 Identities=9% Similarity=-0.028 Sum_probs=133.4
Q ss_pred eEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCC
Q 004149 112 KLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGS 190 (771)
Q Consensus 112 ~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~ 190 (771)
+|+|.... .+..++ ++.+...++...... .++.|++++..|+++..
T Consensus 3 ~ll~~~~~-----~I~~i~~~~~~~~~~~~~~~~p----------~g~~~d~~~~~ly~~D~------------------ 49 (316)
T 1ijq_A 3 YLFFTNRH-----EVRKMTLDRSEYTSLIPNLRNV----------VALDTEVASNRIYWSDL------------------ 49 (316)
T ss_dssp EEEEECBS-----SEEEEETTSCCCEEEECSCSSE----------EEEEEETTTTEEEEEET------------------
T ss_pred EEEEECCC-----eEEEEECCCcceEehhcCCCce----------EEEEEEeCCCEEEEEEC------------------
Confidence 45555333 377777 444444444322222 48899999888877532
Q ss_pred CCccCCCCCCcccccCCcCcccCCccCceEEEEEccC----CceeeccCCCC-CCccceEEEecCCCCCccEEEEEeecC
Q 004149 191 SDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS----GEVQAVKGIPK-SLSVGQVVWAPLNEGLHQYLVFVGWSS 265 (771)
Q Consensus 191 ~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~----~~~~~l~~~~~-~~~~~~~~wspDg~~~~~~l~~~~~~~ 265 (771)
....|+++++++ ...+.+ .+. -..+..+++.+.++. |+++-.
T Consensus 50 -------------------------~~~~I~~~~~~g~~~~~~~~~~--~~~~~~~p~glavd~~~~~----ly~~d~-- 96 (316)
T 1ijq_A 50 -------------------------SQRMICSTQLDRAHGVSSYDTV--ISRDIQAPDGLAVDWIHSN----IYWTDS-- 96 (316)
T ss_dssp -------------------------TTTEEEEEEC--------CEEE--ECSSCSCCCEEEEETTTTE----EEEEET--
T ss_pred -------------------------CCCcEEEEECCCCCCCcccEEE--EeCCCCCcCEEEEeecCCe----EEEEEC--
Confidence 236789999876 333333 222 235667888887776 776531
Q ss_pred cceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCC-CCccccceeecCCCCEEEEEecCCCCCCCC
Q 004149 266 ETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGA 344 (771)
Q Consensus 266 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~ 344 (771)
....|.++++ ++...+.+.. ........++.|++..|+|.....
T Consensus 97 ------------~~~~I~~~~~-----------------~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~------ 141 (316)
T 1ijq_A 97 ------------VLGTVSVADT-----------------KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT------ 141 (316)
T ss_dssp ------------TTTEEEEEET-----------------TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS------
T ss_pred ------------CCCEEEEEeC-----------------CCCceEEEEECCCCCcceEEeCCCCCEEEEEccCC------
Confidence 2337889997 5554444433 334567788999999888876431
Q ss_pred ccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCc
Q 004149 345 HSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 424 (771)
Q Consensus 345 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~ 424 (771)
...|+++++++...+.+... .-. ....++|++++++||++.. ....|+++++++..
T Consensus 142 ---~~~I~~~~~dG~~~~~~~~~------------~~~-------~P~gla~d~~~~~lY~~D~--~~~~I~~~d~dg~~ 197 (316)
T 1ijq_A 142 ---PAKIKKGGLNGVDIYSLVTE------------NIQ-------WPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGN 197 (316)
T ss_dssp ---SCEEEEEETTSCCEEEEECS------------SCS-------CEEEEEEETTTTEEEEEET--TTTEEEEEETTSCS
T ss_pred ---CCeEEEEcCCCCCeEEEEEC------------CCC-------CceEEEEeccCCEEEEEEC--CCCeEEEEecCCCc
Confidence 24699998765332111000 001 1346789999888988754 34578899998766
Q ss_pred EEEecCCC-CCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 425 LLRITPAE-SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 425 ~~~l~~~~-~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
.+.+.... ....-..++.+++.+|++.. ...+|++++..++
T Consensus 198 ~~~~~~~~~~~~~P~giav~~~~ly~~d~---~~~~V~~~~~~~g 239 (316)
T 1ijq_A 198 RKTILEDEKRLAHPFSLAVFEDKVFWTDI---INEAIFSANRLTG 239 (316)
T ss_dssp CEEEEECTTTTSSEEEEEEETTEEEEEET---TTTEEEEEETTTC
T ss_pred eEEEeecCCccCCcEEEEEECCEEEEEEC---CCCeEEEEeCCCC
Confidence 66554321 11112244556778877663 3356777765433
No 445
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.28 E-value=0.00038 Score=71.92 Aligned_cols=115 Identities=11% Similarity=0.033 Sum_probs=63.0
Q ss_pred ccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCcccc
Q 004149 319 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 398 (771)
Q Consensus 319 ~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~ 398 (771)
....+++||+..|+..... ..+|.+++..+++... .+...... ..+..++++|
T Consensus 198 p~gia~d~~~g~l~v~d~~----------~~~I~~~~~~~G~~~~----------~~~~~~~~-------~~~~~~~~~p 250 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADRE----------NGRIQCFKTDTKEFVR----------EIKHASFG-------RNVFAISYIP 250 (329)
T ss_dssp EEEEEEETTTTEEEEEETT----------TTEEEEEETTTCCEEE----------EECCTTTT-------TCEEEEEEET
T ss_pred CcEEEEECCCCEEEEEECC----------CCEEEEEECCCCcEEE----------EEeccccC-------CCcceeeecC
Confidence 5678999997777666543 2468899987554311 11000000 1123455677
Q ss_pred CCCEEEEEee-----eCCeeEEEEEECCCCcEEEecC----CCCCceeeEEeecCCEEEEEEeCCCCCCeEEEEEec
Q 004149 399 DGCTMLLSSI-----WGSSQVIISVNVSSGELLRITP----AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 399 dg~~l~~~~~-----~~~~~~l~~~d~~tg~~~~l~~----~~~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~ 466 (771)
| .++.... ......++.++..+|++..... .........++++| .|+++..... +|.++++.
T Consensus 251 -g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~~---~I~~~~~~ 321 (329)
T 3fvz_A 251 -G-FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHTN---TVWKFTLT 321 (329)
T ss_dssp -T-EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS-EEEEEESSSC---CEEEEEEE
T ss_pred -C-EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC-CEEEEECCCC---EEEEEeCC
Confidence 3 2322221 1223468888988888776642 11223446778887 6666554432 56666654
No 446
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.28 E-value=4.2e-05 Score=75.41 Aligned_cols=181 Identities=18% Similarity=0.134 Sum_probs=106.8
Q ss_pred CceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhh
Q 004149 217 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 296 (771)
Q Consensus 217 ~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 296 (771)
...|.++|++++++..-...+. ......++++|+. |+...|. ...++++|.
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~--~~fgeGi~~~g~~----lyv~t~~--------------~~~v~viD~--------- 93 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDD--SYFGEGLTLLNEK----LYQVVWL--------------KNIGFIYDR--------- 93 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTE----EEEEETT--------------CSEEEEEET---------
T ss_pred CCEEEEEECCCCCEEEEEecCC--CcceEEEEEeCCE----EEEEEec--------------CCEEEEEEC---------
Confidence 4789999999998766521222 2233345566776 7777643 237999997
Q ss_pred hhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecc
Q 004149 297 LELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 375 (771)
Q Consensus 297 ~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 375 (771)
++.+ ...+... ......+++||++|+ .++. ...|+++|.++.+... .+
T Consensus 94 --------~t~~v~~~i~~g--~~~g~glt~Dg~~l~-vs~g----------s~~l~viD~~t~~v~~----------~I 142 (266)
T 2iwa_A 94 --------RTLSNIKNFTHQ--MKDGWGLATDGKILY-GSDG----------TSILYEIDPHTFKLIK----------KH 142 (266)
T ss_dssp --------TTTEEEEEEECC--SSSCCEEEECSSSEE-EECS----------SSEEEEECTTTCCEEE----------EE
T ss_pred --------CCCcEEEEEECC--CCCeEEEEECCCEEE-EECC----------CCeEEEEECCCCcEEE----------EE
Confidence 5544 3344322 122345889999876 4542 2579999987755311 11
Q ss_pred cccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC--------------CCceeeEEe
Q 004149 376 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE--------------SNFSWSLLT 441 (771)
Q Consensus 376 ~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~--------------~~~~~~~~s 441 (771)
..... ..| ...+..+.|. || +||.. .+ ....|.+||++++++.....-. .......++
T Consensus 143 ~Vg~~-~~p---~~~~nele~~-dg-~lyvn-~~-~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~ 214 (266)
T 2iwa_A 143 NVKYN-GHR---VIRLNELEYI-NG-EVWAN-IW-QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWD 214 (266)
T ss_dssp ECEET-TEE---CCCEEEEEEE-TT-EEEEE-ET-TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEE
T ss_pred EECCC-Ccc---cccceeEEEE-CC-EEEEe-cC-CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEc
Confidence 11000 000 0012244566 66 56544 32 3457999999999876543221 123456899
Q ss_pred ecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 442 LDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 442 ~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
++++.++.+.... +.++.+++...
T Consensus 215 ~~~~~lfVTgk~~---~~v~~i~l~~~ 238 (266)
T 2iwa_A 215 QENKRIFVTGKLW---PKLFEIKLHLV 238 (266)
T ss_dssp TTTTEEEEEETTC---SEEEEEEEEEC
T ss_pred CCCCEEEEECCCC---CeEEEEEEecc
Confidence 9999988887544 56888887543
No 447
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.25 E-value=0.00015 Score=76.86 Aligned_cols=178 Identities=11% Similarity=0.002 Sum_probs=109.9
Q ss_pred ceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhh
Q 004149 218 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 297 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 297 (771)
..|++++++++..+.+. ...-..+..+++.+.+.. |+++-. ....|+++++
T Consensus 138 ~~I~r~~~~g~~~~~~~-~~~~~~p~glavd~~~g~----lY~~d~--------------~~~~I~~~~~---------- 188 (386)
T 3v65_B 138 DRILRANLNGSNVEEVV-STGLESPGGLAVDWVHDK----LYWTDS--------------GTSRIEVANL---------- 188 (386)
T ss_dssp TEEEEEETTSCCEEEEE-CSSCSCCCCEEEETTTTE----EEEEET--------------TTTEEEECBT----------
T ss_pred CcEEEEecCCCCcEEEE-eCCCCCccEEEEEeCCCe----EEEEcC--------------CCCeEEEEeC----------
Confidence 68999999988766652 222235567888888776 777642 2237888887
Q ss_pred hhhcCCCCCCcceecC-CCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEeccc
Q 004149 298 ELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 376 (771)
Q Consensus 298 ~~~~~~~~~~~~~~lt-~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 376 (771)
++...+.+. .........++.|++..|+|..... ...|+++++++...+.+...
T Consensus 189 -------dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~---------~~~I~r~~~dG~~~~~~~~~--------- 243 (386)
T 3v65_B 189 -------DGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN---------TPRIEASSMDGSGRRIIADT--------- 243 (386)
T ss_dssp -------TSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSS---------SCEEEEEETTSCSCEEEECS---------
T ss_pred -------CCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCC---------CCEEEEEeCCCCCcEEEEEC---------
Confidence 544444433 3334567789999999998876432 25799999876443221110
Q ss_pred ccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCC
Q 004149 377 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVD 456 (771)
Q Consensus 377 ~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~ 456 (771)
.-. ....++|++++++||++-. ....|++++++++..+.+..... ..-..++.+++.||++.. .
T Consensus 244 ---~~~-------~PnGlavd~~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~~~-~~P~giav~~~~ly~td~---~ 307 (386)
T 3v65_B 244 ---HLF-------WPNGLTIDYAGRRMYWVDA--KHHVIERANLDGSHRKAVISQGL-PHPFAITVFEDSLYWTDW---H 307 (386)
T ss_dssp ---SCS-------CEEEEEEEGGGTEEEEEET--TTTEEEEECTTSCSCEEEECSSC-SSEEEEEEETTEEEEEET---T
T ss_pred ---CCC-------CeeeEEEeCCCCEEEEEEC--CCCEEEEEeCCCCeeEEEEECCC-CCceEEEEECCEEEEeeC---C
Confidence 000 1246789988888988754 34578999987666555543322 112234446777777653 3
Q ss_pred CCeEEEEEe
Q 004149 457 VPQVKYGYF 465 (771)
Q Consensus 457 p~~l~~~~~ 465 (771)
...|.+++.
T Consensus 308 ~~~V~~~~~ 316 (386)
T 3v65_B 308 TKSINSANK 316 (386)
T ss_dssp TTEEEEEET
T ss_pred CCeEEEEEC
Confidence 345776663
No 448
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.24 E-value=4.4e-05 Score=79.73 Aligned_cols=83 Identities=8% Similarity=-0.045 Sum_probs=50.8
Q ss_pred eeecCCCCEEEEEec-C-CCCCCCCccccccceeeecCCCCCCC-CccceeeEEecccccCCCCCcccccCCCCCCcccc
Q 004149 322 PRFSPDGKFLVFLSA-K-SSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 398 (771)
Q Consensus 322 p~~SpDG~~l~f~~~-~-~~~~~g~~~~~~~l~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~ 398 (771)
..++|||+++++... . ... .+. ...+.++|+++.+... +..+. ....+.|++
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~-~~~---~~~~~ViD~~t~~vv~~i~vg~---------------------~p~gi~~s~ 323 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSC-LAA---AENTSSVTASVGQTSGPISNGH---------------------DSDAIIAAQ 323 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCT-TSC---EEEEEEEESSSCCEEECCEEEE---------------------EECEEEECC
T ss_pred eEEcCCCCEEEEEeccccCcc-ccc---CCCEEEEECCCCeEEEEEECCC---------------------CcceEEECC
Confidence 579999999876544 1 100 000 1234599998866421 11111 134678999
Q ss_pred CCCEEEEEeeeCCeeEEEEEECCCCcEEEecC
Q 004149 399 DGCTMLLSSIWGSSQVIISVNVSSGELLRITP 430 (771)
Q Consensus 399 dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~ 430 (771)
||++++++... +...+..||+.++++..-..
T Consensus 324 Dg~~l~va~~~-~~~~VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 324 DGASDNYANSA-GTEVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp SSSCEEEEEET-TTTEEEEEESSSCEEEEECC
T ss_pred CCCEEEEEccC-CCCeEEEEECCCCcEEEEEE
Confidence 99988777652 23568888999998775544
No 449
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.23 E-value=4.8e-05 Score=74.97 Aligned_cols=204 Identities=9% Similarity=0.016 Sum_probs=117.5
Q ss_pred eEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCC
Q 004149 102 SAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 180 (771)
Q Consensus 102 ~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 180 (771)
....|+||| + +|++....+...+..++ ..++..+.+.++...+ ...++++|++|+....
T Consensus 24 ~Gl~~~~dg-~-Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~f----------geGi~~~g~~lyv~t~-------- 83 (266)
T 2iwa_A 24 QGLVYAEND-T-LFESTGLYGRSSVRQVALQTGKVENIHKMDDSYF----------GEGLTLLNEKLYQVVW-------- 83 (266)
T ss_dssp EEEEECSTT-E-EEEEECSTTTCEEEEEETTTCCEEEEEECCTTCC----------EEEEEEETTEEEEEET--------
T ss_pred ccEEEeCCC-e-EEEECCCCCCCEEEEEECCCCCEEEEEecCCCcc----------eEEEEEeCCEEEEEEe--------
Confidence 567899996 4 46665433567788888 6677766666644332 3345556777766533
Q ss_pred ccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEE
Q 004149 181 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVF 260 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~ 260 (771)
....++++|.++.++..- ++.. .......++||++ |+.
T Consensus 84 -----------------------------------~~~~v~viD~~t~~v~~~--i~~g-~~~g~glt~Dg~~----l~v 121 (266)
T 2iwa_A 84 -----------------------------------LKNIGFIYDRRTLSNIKN--FTHQ-MKDGWGLATDGKI----LYG 121 (266)
T ss_dssp -----------------------------------TCSEEEEEETTTTEEEEE--EECC-SSSCCEEEECSSS----EEE
T ss_pred -----------------------------------cCCEEEEEECCCCcEEEE--EECC-CCCeEEEEECCCE----EEE
Confidence 236899999998876543 2222 1234557889997 764
Q ss_pred EeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCC--c---cccceeecCCCCEEEEE
Q 004149 261 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESI--S---SAFFPRFSPDGKFLVFL 334 (771)
Q Consensus 261 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~--~---~~~~p~~SpDG~~l~f~ 334 (771)
++ ....|+.+|. ++.+ ...+.-.. . ......|. || +| |.
T Consensus 122 -s~--------------gs~~l~viD~-----------------~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~l-yv 166 (266)
T 2iwa_A 122 -SD--------------GTSILYEIDP-----------------HTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EV-WA 166 (266)
T ss_dssp -EC--------------SSSEEEEECT-----------------TTCCEEEEEECEETTEECCCEEEEEEE-TT-EE-EE
T ss_pred -EC--------------CCCeEEEEEC-----------------CCCcEEEEEEECCCCcccccceeEEEE-CC-EE-EE
Confidence 42 2237999997 5544 33333211 1 13345677 76 44 44
Q ss_pred ecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEeccccc-C--CCCCcccccCCCCCCccccCCCEEEEEeeeCC
Q 004149 335 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCA-E--GDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 411 (771)
Q Consensus 335 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~--~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~ 411 (771)
.... ...|.++|.++++... .+++-... . ....+ ....+..++|+||++++|++. ..
T Consensus 167 n~~~---------~~~V~vID~~tg~V~~-------~I~~~g~~~~~~~~~~~--~~~v~nGIa~~~~~~~lfVTg--k~ 226 (266)
T 2iwa_A 167 NIWQ---------TDCIARISAKDGTLLG-------WILLPNLRKKLIDEGFR--DIDVLNGIAWDQENKRIFVTG--KL 226 (266)
T ss_dssp EETT---------SSEEEEEETTTCCEEE-------EEECHHHHHHHHHTTCT--TCCCEEEEEEETTTTEEEEEE--TT
T ss_pred ecCC---------CCeEEEEECCCCcEEE-------EEECCCccccccccccc--ccCceEEEEEcCCCCEEEEEC--CC
Confidence 4432 3579999998877421 11110000 0 00000 001234678999999887764 45
Q ss_pred eeEEEEEECCC
Q 004149 412 SQVIISVNVSS 422 (771)
Q Consensus 412 ~~~l~~~d~~t 422 (771)
+..||.|++..
T Consensus 227 ~~~v~~i~l~~ 237 (266)
T 2iwa_A 227 WPKLFEIKLHL 237 (266)
T ss_dssp CSEEEEEEEEE
T ss_pred CCeEEEEEEec
Confidence 56788888644
No 450
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.22 E-value=0.00026 Score=73.73 Aligned_cols=111 Identities=11% Similarity=-0.008 Sum_probs=57.9
Q ss_pred ccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCcccc
Q 004149 319 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 398 (771)
Q Consensus 319 ~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~ 398 (771)
....+|||||+.|++..... ..||.++........+.... +...+...... .....+++++
T Consensus 197 ~~gia~s~dg~~ly~~~~~~----------~~l~~~~~~~~~~~~~~~~~--~~~~~~~~g~~-------g~pdgia~d~ 257 (343)
T 2qe8_A 197 VNGIVLDAENEWLYLSPMHS----------TSMYRIKSADLSNLQLTDAE--LGSKIERYSEK-------PICDGISIDK 257 (343)
T ss_dssp EEEEEECTTSCEEEEEESSC----------SEEEEEEHHHHTCTTCCHHH--HHTTCEEEEEC-------CSCSCEEECT
T ss_pred cceeEeccCCCEEEEEeCCC----------CeEEEEEHHHhcCCCCChhh--hhcceEecccC-------CCCceEEECC
Confidence 35689999999998877542 36888875311000010000 00000000000 0234678999
Q ss_pred CCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC--CCceeeEEeecCCEEEEEEe
Q 004149 399 DGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE--SNFSWSLLTLDGDNIIAVSS 452 (771)
Q Consensus 399 dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~--~~~~~~~~s~d~~~l~~~~s 452 (771)
||. |+++... ...|+++|.++|++..+.... .......+++++. |+++.+
T Consensus 258 ~G~-l~va~~~--~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~-l~v~~~ 309 (343)
T 2qe8_A 258 DHN-IYVGDLA--HSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGY-LYFDCN 309 (343)
T ss_dssp TCC-EEEEEGG--GTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSC-EEEEEC
T ss_pred CCC-EEEEccC--CCeEEEEECCCCCEEEEEECCceecCCeeEECCCCc-EEEEeC
Confidence 986 6665433 346888898667776665332 1233456666654 555544
No 451
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.21 E-value=0.00026 Score=73.78 Aligned_cols=177 Identities=11% Similarity=0.012 Sum_probs=108.5
Q ss_pred ceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhh
Q 004149 218 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 297 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 297 (771)
..|++++++++..+.+. ...-..+..+++.+.+.. |+++-. ....|+++++
T Consensus 95 ~~I~r~~~~g~~~~~~~-~~~~~~p~glavd~~~g~----ly~~d~--------------~~~~I~~~~~---------- 145 (349)
T 3v64_C 95 DRILRANLNGSNVEEVV-STGLESPGGLAVDWVHDK----LYWTDS--------------GTSRIEVANL---------- 145 (349)
T ss_dssp TEEEEEETTSCSCEEEE-CSSCSCCCEEEEETTTTE----EEEEET--------------TTTEEEEEET----------
T ss_pred CceEEEecCCCCceEEE-eCCCCCccEEEEecCCCe----EEEEcC--------------CCCeEEEEcC----------
Confidence 68999999988766652 122234567888888776 777642 2237999997
Q ss_pred hhhcCCCCCCcceecC-CCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEeccc
Q 004149 298 ELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 376 (771)
Q Consensus 298 ~~~~~~~~~~~~~~lt-~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 376 (771)
++...+.+. .........++.|++..|+|..... ...|+++++++...+.+...
T Consensus 146 -------dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~---------~~~I~r~~~dG~~~~~~~~~--------- 200 (349)
T 3v64_C 146 -------DGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN---------TPRIEASSMDGSGRRIIADT--------- 200 (349)
T ss_dssp -------TSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSS---------SCEEEEEETTSCSCEESCCS---------
T ss_pred -------CCCceEEEEeCCCCCcceEEEecCcCeEEEeccCC---------CCEEEEEeCCCCCcEEEEEC---------
Confidence 554444443 3334567789999999898887432 25799999876443222110
Q ss_pred ccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCCC
Q 004149 377 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVD 456 (771)
Q Consensus 377 ~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~~ 456 (771)
... ....++|++++++||++-. ....|+++++++...+.+...... .-..++.+++.||++...
T Consensus 201 ---~~~-------~PnGla~d~~~~~lY~aD~--~~~~I~~~~~dG~~~~~~~~~~~~-~P~giav~~~~ly~td~~--- 264 (349)
T 3v64_C 201 ---HLF-------WPNGLTIDYAGRRMYWVDA--KHHVIERANLDGSHRKAVISQGLP-HPFAITVFEDSLYWTDWH--- 264 (349)
T ss_dssp ---SCS-------CEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSSCS-SEEEEEEETTEEEEEETT---
T ss_pred ---CCC-------CcceEEEeCCCCEEEEEEC--CCCEEEEEeCCCCceEEEEeCCCC-CceEEEEECCEEEEecCC---
Confidence 001 1246789988888988754 345789999877665555432221 112334466677766532
Q ss_pred CCeEEEEE
Q 004149 457 VPQVKYGY 464 (771)
Q Consensus 457 p~~l~~~~ 464 (771)
...|.+++
T Consensus 265 ~~~V~~~~ 272 (349)
T 3v64_C 265 TKSINSAN 272 (349)
T ss_dssp TTEEEEEE
T ss_pred CCeEEEEE
Confidence 23466655
No 452
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.21 E-value=0.00015 Score=72.42 Aligned_cols=174 Identities=5% Similarity=-0.049 Sum_probs=95.2
Q ss_pred ceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhh
Q 004149 218 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 297 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 297 (771)
..|+++|.+++....+. ......+..++++|||+ |++... ....|++++.
T Consensus 87 ~~i~~~d~~~~~~~~~~-~~~~~~p~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~---------- 136 (270)
T 1rwi_B 87 NRVVTLAAGSNNQTVLP-FDGLNYPEGLAVDTQGA-----VYVADR--------------GNNRVVKLAA---------- 136 (270)
T ss_dssp TEEEEECTTCSCCEECC-CCSCSSEEEEEECTTCC-----EEEEEG--------------GGTEEEEECT----------
T ss_pred CEEEEEeCCCceEeeee-cCCcCCCcceEECCCCC-----EEEEEC--------------CCCEEEEEEC----------
Confidence 57888998877665552 12223567889999886 665531 1236888875
Q ss_pred hhhcCCCCCCcceecCC-CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEeccc
Q 004149 298 ELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 376 (771)
Q Consensus 298 ~~~~~~~~~~~~~~lt~-~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 376 (771)
.+........ .........++|||+ |++.... ...|+++|..++.......
T Consensus 137 -------~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~----------~~~i~~~~~~~~~~~~~~~---------- 188 (270)
T 1rwi_B 137 -------GSKTQTVLPFTGLNDPDGVAVDNSGN-VYVTDTD----------NNRVVKLEAESNNQVVLPF---------- 188 (270)
T ss_dssp -------TCCSCEECCCCSCCSCCCEEECTTCC-EEEEEGG----------GTEEEEECTTTCCEEECCC----------
T ss_pred -------CCceeEeeccccCCCceeEEEeCCCC-EEEEECC----------CCEEEEEecCCCceEeecc----------
Confidence 3333222222 223467789999998 5544432 2468899876543211100
Q ss_pred ccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC-CCceeeEEeecCCEEEEEEeCCC
Q 004149 377 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE-SNFSWSLLTLDGDNIIAVSSSPV 455 (771)
Q Consensus 377 ~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~-~~~~~~~~s~d~~~l~~~~s~~~ 455 (771)
..+ ..+..+++.+|| .|+++... ...|++++.++.....+.... .......++++|+ |+++....
T Consensus 189 ----~~~-----~~p~~i~~d~~g-~l~v~~~~--~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~- 254 (270)
T 1rwi_B 189 ----TDI-----TAPWGIAVDEAG-TVYVTEHN--TNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRT-VYVADRGN- 254 (270)
T ss_dssp ----SSC-----CSEEEEEECTTC-CEEEEETT--TSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCC-EEEEEGGG-
T ss_pred ----cCC-----CCceEEEECCCC-CEEEEECC--CCcEEEEcCCCCcceeeccCCCCCceeEEECCCCC-EEEEECCC-
Confidence 000 123456788888 46665432 335778888766555443222 2233445666665 55444322
Q ss_pred CCCeEEEEEe
Q 004149 456 DVPQVKYGYF 465 (771)
Q Consensus 456 ~p~~l~~~~~ 465 (771)
.+|.++++
T Consensus 255 --~~v~~~~~ 262 (270)
T 1rwi_B 255 --DRVVKLTS 262 (270)
T ss_dssp --TEEEEECC
T ss_pred --CEEEEEcC
Confidence 34555554
No 453
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.19 E-value=2.4e-05 Score=85.16 Aligned_cols=104 Identities=13% Similarity=0.103 Sum_probs=58.5
Q ss_pred ceEEEEEccC--Cce-eeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchh
Q 004149 218 PSLFVININS--GEV-QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 294 (771)
Q Consensus 218 ~~l~v~d~~~--~~~-~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 294 (771)
..+-++|..+ +++ ... ++.......+.+||||++ ++. +.. ...++.++|+....
T Consensus 254 ~~V~VID~~~~~~~~~~~~--Ipvg~~PhGv~~sPDGk~----v~V-~~~-------------~s~~VsVid~~~~~--- 310 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRY--IPIANNPHGCNMAPDKKH----LCV-AGK-------------LSPTVTVLDVTRFD--- 310 (595)
T ss_dssp TTEEEEECSGGGCCSSEEE--EEEESSCCCEEECTTSSE----EEE-ECT-------------TSSBEEEEEGGGHH---
T ss_pred CcEEEEeCcccCCceeEEE--EecCCCceEEEEcCCCCE----EEE-eCC-------------CCCeEEEEECcccc---
Confidence 4588999987 443 333 344446678899999996 554 432 22378899972100
Q ss_pred hhhhhhcCCCCCCcc-eecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCC
Q 004149 295 SELELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 358 (771)
Q Consensus 295 ~~~~~~~~~~~~~~~-~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~ 358 (771)
.+ +.......... ..+ .-.......+|+||| . +|++..- .+++.+||+++
T Consensus 311 -~~-~~~~l~~~~~v~~~v-~vG~gP~h~aF~~dG-~-aY~t~~l---------dsqV~kwdi~~ 361 (595)
T 1fwx_A 311 -AV-FYENADPRSAVVAEP-ELGLGPLHTAFDGRG-N-AYTSLFL---------DSQVVKWNIED 361 (595)
T ss_dssp -HH-HHSCCCGGGGEEECC-BCCSCEEEEEECTTS-E-EEEEETT---------TTEEEEEEHHH
T ss_pred -cc-cccccCcccceEEEc-CCCCCcceEEECCCC-e-EEEEEec---------CCcEEEEEhhH
Confidence 00 00000000011 122 122346778999999 4 6777654 36788888765
No 454
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.19 E-value=0.00036 Score=71.27 Aligned_cols=228 Identities=13% Similarity=0.109 Sum_probs=120.8
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCC
Q 004149 101 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 180 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 180 (771)
...++|+|+|+ | |+.+. ....++.++..+............ .+++++|||+ | |+++...
T Consensus 34 pegia~~~~g~-l-yv~d~--~~~~I~~~d~~g~~~~~~~~~~~p----------~gia~~~dG~-l-~vad~~~----- 92 (306)
T 2p4o_A 34 LENLASAPDGT-I-FVTNH--EVGEIVSITPDGNQQIHATVEGKV----------SGLAFTSNGD-L-VATGWNA----- 92 (306)
T ss_dssp EEEEEECTTSC-E-EEEET--TTTEEEEECTTCCEEEEEECSSEE----------EEEEECTTSC-E-EEEEECT-----
T ss_pred cceEEECCCCC-E-EEEeC--CCCeEEEECCCCceEEEEeCCCCc----------eeEEEcCCCc-E-EEEeccC-----
Confidence 45689999997 5 44443 234578777445544444443333 4889999998 4 4433210
Q ss_pred ccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEE
Q 004149 181 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVF 260 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~ 260 (771)
....|+.+|..+++++.+...+.......++..+++ . ++
T Consensus 93 -----------------------------------~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~-~----~~- 131 (306)
T 2p4o_A 93 -----------------------------------DSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDT-Q----YL- 131 (306)
T ss_dssp -----------------------------------TSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSS-E----EE-
T ss_pred -----------------------------------CcceEEEEcCCCCeEEEEEeCCCccccCcccccCCC-c----EE-
Confidence 123688888888887665212222222334433433 2 33
Q ss_pred EeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCC--cce---------ecCCCCccccceeecCCCC
Q 004149 261 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL--PVV---------NLTESISSAFFPRFSPDGK 329 (771)
Q Consensus 261 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~~~---------~lt~~~~~~~~p~~SpDG~ 329 (771)
++.. ....||.+|. .++ +.. ............ +|||+
T Consensus 132 v~d~-------------~~g~i~~~d~-----------------~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~ 179 (306)
T 2p4o_A 132 TADS-------------YRGAIWLIDV-----------------VQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGN 179 (306)
T ss_dssp EEET-------------TTTEEEEEET-----------------TTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETT
T ss_pred EEEC-------------CCCeEEEEeC-----------------CCCcEeEEEECCccccccccCCCCcCCCc--CcCCC
Confidence 3321 2347888886 322 111 000111112222 89999
Q ss_pred EEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeee
Q 004149 330 FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW 409 (771)
Q Consensus 330 ~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~ 409 (771)
+|++.... ..+|+++++++.+. +.. ...... + .....+++.+||+ |+++..
T Consensus 180 ~lyv~d~~----------~~~I~~~~~~~~g~--~~~-~~~~~~---------~-----~~P~gi~vd~dG~-l~va~~- 230 (306)
T 2p4o_A 180 FLYVSNTE----------KMLLLRIPVDSTDK--PGE-PEIFVE---------Q-----TNIDDFAFDVEGN-LYGATH- 230 (306)
T ss_dssp EEEEEETT----------TTEEEEEEBCTTSC--BCC-CEEEEE---------S-----CCCSSEEEBTTCC-EEEECB-
T ss_pred EEEEEeCC----------CCEEEEEEeCCCCC--CCc-cEEEec---------c-----CCCCCeEECCCCC-EEEEeC-
Confidence 88776644 25799999875221 110 001110 0 1245678899996 655443
Q ss_pred CCeeEEEEEECCCCcEEEe---cCCCCCceeeEEe---ecCCEEEEEEeC
Q 004149 410 GSSQVIISVNVSSGELLRI---TPAESNFSWSLLT---LDGDNIIAVSSS 453 (771)
Q Consensus 410 ~~~~~l~~~d~~tg~~~~l---~~~~~~~~~~~~s---~d~~~l~~~~s~ 453 (771)
....|.+++.+ |++..+ ...........|. +|++.||.+...
T Consensus 231 -~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 231 -IYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp -TTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred -CCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 23457788875 666543 2221223445666 677888777654
No 455
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.16 E-value=0.00064 Score=70.78 Aligned_cols=162 Identities=9% Similarity=0.058 Sum_probs=105.5
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
.....++|.|.+..|.++- . ....|+.+. +++....+....... ..++++.+.+..|++...
T Consensus 73 ~~~~~l~~d~~~~~ly~~D-~--~~~~I~r~~~~g~~~~~~~~~~~~~---------p~glavd~~~g~ly~~d~----- 135 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSD-V--TLDRILRANLNGSNVEEVVSTGLES---------PGGLAVDWVHDKLYWTDS----- 135 (349)
T ss_dssp SCEEEEEEETTTTEEEEEE-T--TTTEEEEEETTSCSCEEEECSSCSC---------CCEEEEETTTTEEEEEET-----
T ss_pred CceEEEEEeccccEEEEEe-c--cCCceEEEecCCCCceEEEeCCCCC---------ccEEEEecCCCeEEEEcC-----
Confidence 3467789999888886653 2 234677777 444444444322111 147888888887877522
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccE
Q 004149 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 257 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~ 257 (771)
....|+++++++...+.+. ...-..+..+++.|++..
T Consensus 136 --------------------------------------~~~~I~~~~~dG~~~~~l~-~~~l~~P~~iavdp~~g~---- 172 (349)
T 3v64_C 136 --------------------------------------GTSRIEVANLDGAHRKVLL-WQSLEKPRAIALHPMEGT---- 172 (349)
T ss_dssp --------------------------------------TTTEEEEEETTSCSCEEEE-CTTCSCEEEEEEETTTTE----
T ss_pred --------------------------------------CCCeEEEEcCCCCceEEEE-eCCCCCcceEEEecCcCe----
Confidence 2358999999887666552 122235678899998876
Q ss_pred EEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCC-CCccccceeecCCCCEEEEEec
Q 004149 258 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 258 l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~~~~~~p~~SpDG~~l~f~~~ 336 (771)
|+++-+.. ...|+++++ ++...+.+.. ........+|+|+++.|+|...
T Consensus 173 ly~td~~~-------------~~~I~r~~~-----------------dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 173 IYWTDWGN-------------TPRIEASSM-----------------DGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDA 222 (349)
T ss_dssp EEEEECSS-------------SCEEEEEET-----------------TSCSCEESCCSSCSCEEEEEEETTTTEEEEEET
T ss_pred EEEeccCC-------------CCEEEEEeC-----------------CCCCcEEEEECCCCCcceEEEeCCCCEEEEEEC
Confidence 77765321 247999998 5555555433 3334678899999999998875
Q ss_pred CCCCCCCCccccccceeeecCCCC
Q 004149 337 KSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
.. ..|+++|+++..
T Consensus 223 ~~----------~~I~~~~~dG~~ 236 (349)
T 3v64_C 223 KH----------HVIERANLDGSH 236 (349)
T ss_dssp TT----------TEEEEEETTSCS
T ss_pred CC----------CEEEEEeCCCCc
Confidence 42 479999987643
No 456
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.15 E-value=0.00029 Score=74.52 Aligned_cols=161 Identities=9% Similarity=0.078 Sum_probs=103.9
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
.....++|.+.+..|.++ +. ....|+.+. +++....++....... .++++.+.+..|++...
T Consensus 116 ~~~~gl~~d~~~~~ly~~-D~--~~~~I~r~~~~g~~~~~~~~~~~~~p---------~glavd~~~g~lY~~d~----- 178 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWS-DV--TLDRILRANLNGSNVEEVVSTGLESP---------GGLAVDWVHDKLYWTDS----- 178 (386)
T ss_dssp SCEEEEEEETTTTEEEEE-ET--TTTEEEEEETTSCCEEEEECSSCSCC---------CCEEEETTTTEEEEEET-----
T ss_pred CccEEEEEecCCCeEEEE-eC--CCCcEEEEecCCCCcEEEEeCCCCCc---------cEEEEEeCCCeEEEEcC-----
Confidence 446778999988888665 32 234688877 4444334433221111 47888888887777522
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCC-CccceEEEecCCCCCcc
Q 004149 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~-~~~~~~~wspDg~~~~~ 256 (771)
....|+++++++...+.+ .... ..+..++..|++..
T Consensus 179 --------------------------------------~~~~I~~~~~dg~~~~~l--~~~~l~~P~giavdp~~g~--- 215 (386)
T 3v65_B 179 --------------------------------------GTSRIEVANLDGAHRKVL--LWQSLEKPRAIALHPMEGT--- 215 (386)
T ss_dssp --------------------------------------TTTEEEECBTTSCSCEEE--ECSSCSCEEEEEEETTTTE---
T ss_pred --------------------------------------CCCeEEEEeCCCCceEEe--ecCCCCCCcEEEEEcCCCe---
Confidence 225788888887765555 2322 35678899998876
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecC-CCCccccceeecCCCCEEEEEe
Q 004149 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLS 335 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt-~~~~~~~~p~~SpDG~~l~f~~ 335 (771)
|+++-+.. ...|+++++ ++...+.+. ........++|+|++++|+|..
T Consensus 216 -ly~td~~~-------------~~~I~r~~~-----------------dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD 264 (386)
T 3v65_B 216 -IYWTDWGN-------------TPRIEASSM-----------------DGSGRRIIADTHLFWPNGLTIDYAGRRMYWVD 264 (386)
T ss_dssp -EEEEECSS-------------SCEEEEEET-----------------TSCSCEEEECSSCSCEEEEEEEGGGTEEEEEE
T ss_pred -EEEeccCC-------------CCEEEEEeC-----------------CCCCcEEEEECCCCCeeeEEEeCCCCEEEEEE
Confidence 77664321 247999998 554444443 3333467899999999999887
Q ss_pred cCCCCCCCCccccccceeeecCCCC
Q 004149 336 AKSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 336 ~~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
... ..|+++|+++..
T Consensus 265 ~~~----------~~I~~~d~dG~~ 279 (386)
T 3v65_B 265 AKH----------HVIERANLDGSH 279 (386)
T ss_dssp TTT----------TEEEEECTTSCS
T ss_pred CCC----------CEEEEEeCCCCe
Confidence 542 579999987543
No 457
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.14 E-value=0.00033 Score=74.46 Aligned_cols=182 Identities=8% Similarity=-0.055 Sum_probs=109.7
Q ss_pred ceEEEEEccC----CceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccch
Q 004149 218 PSLFVININS----GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 293 (771)
Q Consensus 218 ~~l~v~d~~~----~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 293 (771)
..|+.+++++ .....+. ...-..+..+++.+.++. |+++-. ....|+++++
T Consensus 134 ~~I~~~~~~g~~~~~~~~~~~-~~~~~~p~glavD~~~~~----lY~~d~--------------~~~~I~~~~~------ 188 (400)
T 3p5b_L 134 RMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSN----IYWTDS--------------VLGTVSVADT------ 188 (400)
T ss_dssp TEEEEEEC------CCCEEEE-CSSCSCEEEEEEETTTTE----EEEEET--------------TTTEEEEECT------
T ss_pred CeEEEEEcccCCCCCcceEEE-eCCCCCcccEEEEecCCc----eEEEEC--------------CCCeEEEEeC------
Confidence 5788888876 2333331 122234567788877776 776641 2237899997
Q ss_pred hhhhhhhcCCCCCCcceecCC-CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEE
Q 004149 294 ASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVI 372 (771)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~lt~-~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 372 (771)
++...+.+.. ........++.|.+..|+|..... ...|+++++++...+.+...
T Consensus 189 -----------~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~---------~~~I~~~~~dG~~~~~~~~~----- 243 (400)
T 3p5b_L 189 -----------KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT---------PAKIKKGGLNGVDIYSLVTE----- 243 (400)
T ss_dssp -----------TTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSS---------SCCEEEEETTSCSCEEEECS-----
T ss_pred -----------CCCceEEEEeCCCCCcceEEEecccCeEEEEeCCC---------CCEEEEEeCCCCccEEEEEC-----
Confidence 5555444433 334467789999989898876432 24699999876443222110
Q ss_pred ecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC-CceeeEEeecCCEEEEEE
Q 004149 373 PVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES-NFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 373 ~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~-~~~~~~~s~d~~~l~~~~ 451 (771)
.-. .+..+++++++++||++-. ....|++++++++..+.+..... ...-..++.+++.||.+.
T Consensus 244 -------~l~-------~P~glavd~~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd 307 (400)
T 3p5b_L 244 -------NIQ-------WPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 307 (400)
T ss_dssp -------SCS-------CEEEEEEETTTTEEEEEET--TTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEE
T ss_pred -------CCC-------ceEEEEEEeCCCEEEEEEC--CCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEec
Confidence 001 1346788888888988743 44579999998777666654322 112235666888888877
Q ss_pred eCCCCCCeEEEEEeccc
Q 004149 452 SSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 452 s~~~~p~~l~~~~~~~~ 468 (771)
.. ...|++++..++
T Consensus 308 ~~---~~~V~~~~~~~G 321 (400)
T 3p5b_L 308 II---NEAIFSANRLTG 321 (400)
T ss_dssp SS---SCSEEEEESSSC
T ss_pred CC---CCeEEEEEcCCC
Confidence 33 345777764444
No 458
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.10 E-value=0.00038 Score=74.30 Aligned_cols=158 Identities=11% Similarity=0.160 Sum_probs=89.6
Q ss_pred EEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEE-ecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCc
Q 004149 104 VVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEF-HVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTF 181 (771)
Q Consensus 104 ~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~ 181 (771)
++|+|+|+.|++. +.. +...++.+. .++...+.. ...... .....+++++|++..|++. ..
T Consensus 176 ia~~~~g~~l~~~-d~~-~~~~I~~~d~~~~~~~~~~g~~~~~~------~~~p~~iav~p~~g~lyv~-d~-------- 238 (409)
T 3hrp_A 176 PAVTKDKQRVYSI-GWE-GTHTVYVYMKASGWAPTRIGQLGSTF------SGKIGAVALDETEEWLYFV-DS-------- 238 (409)
T ss_dssp CEECTTSSEEEEE-BSS-TTCEEEEEEGGGTTCEEEEEECCTTS------CSCCCBCEECTTSSEEEEE-CT--------
T ss_pred eeEecCCCcEEEE-ecC-CCceEEEEEcCCCceeEEeeeccchh------cCCcEEEEEeCCCCeEEEE-EC--------
Confidence 8999999987554 332 223688877 333322222 111100 0112588999966667663 21
Q ss_pred cCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccC---CCCC-Cccc-eEEEecCCCCCcc
Q 004149 182 SLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG---IPKS-LSVG-QVVWAPLNEGLHQ 256 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~---~~~~-~~~~-~~~wspDg~~~~~ 256 (771)
...|+++|.+++....+.+ .... ..+. .++|+|++..
T Consensus 239 -----------------------------------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~--- 280 (409)
T 3hrp_A 239 -----------------------------------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSN--- 280 (409)
T ss_dssp -----------------------------------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTE---
T ss_pred -----------------------------------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCE---
Confidence 2579999998887655410 1111 1223 8999997765
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCC---------------Cccccc
Q 004149 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES---------------ISSAFF 321 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~---------------~~~~~~ 321 (771)
|+++. . ....|++++. ++. ...+... ......
T Consensus 281 -lyv~d-~-------------~~~~I~~~~~-----------------~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~g 327 (409)
T 3hrp_A 281 -FYMSD-Q-------------NLSSVYKITP-----------------DGE-CEWFCGSATQKTVQDGLREEALFAQPNG 327 (409)
T ss_dssp -EEEEE-T-------------TTTEEEEECT-----------------TCC-EEEEEECTTCCSCBCEEGGGCBCSSEEE
T ss_pred -EEEEe-C-------------CCCEEEEEec-----------------CCC-EEEEEeCCCCCCcCCCcccccEeCCCeE
Confidence 66553 1 2336888876 221 2222111 123567
Q ss_pred eeecCCCCEEEEEec-CCCCCCCCccccccceeeecCCCC
Q 004149 322 PRFSPDGKFLVFLSA-KSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 322 p~~SpDG~~l~f~~~-~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
.+++|||+ |++... . ..+|+++++.++.
T Consensus 328 ia~d~dG~-lyvad~~~----------~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 328 MTVDEDGN-FYIVDGFK----------GYCLRKLDILDGY 356 (409)
T ss_dssp EEECTTCC-EEEEETTT----------TCEEEEEETTTTE
T ss_pred EEEeCCCC-EEEEeCCC----------CCEEEEEECCCCE
Confidence 88999998 665543 3 3568899876554
No 459
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.07 E-value=0.00063 Score=69.72 Aligned_cols=160 Identities=9% Similarity=0.026 Sum_probs=101.6
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcc-eEEEecC-CcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004149 100 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQL-EKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~-~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
......|.+.+..|.++ +. ....|+.+. +++.. ..+.... ... .++++.+.+..|++.-.
T Consensus 36 ~~~~ld~d~~~~~lyw~-D~--~~~~I~r~~~~g~~~~~~~~~~~l~~p----------~glavd~~~g~ly~~d~---- 98 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWS-DV--SEEAIKRTEFNKTESVQNVVVSGLLSP----------DGLACDWLGEKLYWTDS---- 98 (318)
T ss_dssp EEEEEEEEGGGTEEEEE-ET--TTTEEEEEETTSSSCCCEEEEECCSCC----------CEEEEETTTTEEEEEET----
T ss_pred ccEEEEEEeCCCEEEEE-EC--CCCcEEEEEccCCCceEEEEcCCCCCc----------cEEEEEcCCCeEEEEEC----
Confidence 45678899988888665 33 234677777 44322 2222221 112 47888887877766421
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004149 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
....|.++++++...+.+. ...-..+..++..|++..
T Consensus 99 ---------------------------------------~~~~I~~~~~dG~~~~~l~-~~~~~~P~giavdp~~g~--- 135 (318)
T 3sov_A 99 ---------------------------------------ETNRIEVSNLDGSLRKVLF-WQELDQPRAIALDPSSGF--- 135 (318)
T ss_dssp ---------------------------------------TTTEEEEEETTSCSCEEEE-CSSCSSEEEEEEEGGGTE---
T ss_pred ---------------------------------------CCCEEEEEECCCCcEEEEE-eCCCCCccEEEEeCCCCE---
Confidence 2367899999887666552 122335678889998776
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceec-CCCCccccceeecCCCCEEEEEe
Q 004149 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL-TESISSAFFPRFSPDGKFLVFLS 335 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l-t~~~~~~~~p~~SpDG~~l~f~~ 335 (771)
|+++-+. ....|+++++ ++...+.+ ..........+|+|+++.|+|..
T Consensus 136 -ly~td~~-------------~~~~I~r~~~-----------------dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD 184 (318)
T 3sov_A 136 -MYWTDWG-------------EVPKIERAGM-----------------DGSSRFIIINSEIYWPNGLTLDYEEQKLYWAD 184 (318)
T ss_dssp -EEEEECS-------------SSCEEEEEET-----------------TSCSCEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred -EEEEecC-------------CCCEEEEEEc-----------------CCCCeEEEEECCCCCccEEEEeccCCEEEEEE
Confidence 7665431 1247999998 55444444 33334467889999999999987
Q ss_pred cCCCCCCCCccccccceeeecCCCC
Q 004149 336 AKSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 336 ~~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
... ..|+++|+++..
T Consensus 185 ~~~----------~~I~~~d~dG~~ 199 (318)
T 3sov_A 185 AKL----------NFIHKSNLDGTN 199 (318)
T ss_dssp TTT----------TEEEEEETTSCS
T ss_pred CCC----------CEEEEEcCCCCc
Confidence 543 579999987644
No 460
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.06 E-value=0.00032 Score=75.91 Aligned_cols=264 Identities=15% Similarity=0.128 Sum_probs=138.4
Q ss_pred EeCCCCCeEEEEecCCCCCCeEEEEec--CCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCcc
Q 004149 105 VPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFS 182 (771)
Q Consensus 105 ~~SPdG~~la~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~ 182 (771)
.++++|++|+..+..+ .+.+|+ .++....+. +..+. +..+.|+ ++.|+..+.+.... .|+
T Consensus 124 ~~~~~g~~l~sg~~dg-----~i~vwd~~~~~~~~~~~---~h~~~------v~~~~~~--~~~l~s~~~dg~i~--vwd 185 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDN-----TLKVWSAVTGKCLRTLV---GHTGG------VWSSQMR--DNIIISGSTDRTLK--VWN 185 (445)
T ss_dssp EEEEETTEEEEEETTS-----CEEEEETTTCCEEEECC---CCSSC------EEEEEEE--TTEEEEEETTSCEE--EEE
T ss_pred EEEEcCCEEEEEECCC-----cEEEEECCCCcEEEEEc---CCCCC------EEEEEec--CCEEEEEeCCCeEE--EEE
Confidence 5788899998776543 455663 333222222 11111 2567776 55677766554332 233
Q ss_pred CCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEe
Q 004149 183 LGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVG 262 (771)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~ 262 (771)
............+........+.+ ...+++.....|.+||+.+++..... ......+..+.| ||+. |+..+
T Consensus 186 ~~~~~~~~~~~~h~~~v~~~~~~~--~~l~s~s~dg~i~~wd~~~~~~~~~~-~~~~~~v~~~~~--~~~~----l~~~~ 256 (445)
T 2ovr_B 186 AETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQY--DGRR----VVSGA 256 (445)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEET--TEEEEEETTSEEEEEESSSCCEEEEE-ECCSSCEEEEEE--CSSC----EEEEE
T ss_pred CCcCcEEEEECCCCCcEEEEEecC--CEEEEEeCCCEEEEEECCCCcEEEEE-cCCcccEEEEEE--CCCE----EEEEc
Confidence 221111111111222222333432 23555667789999999988765441 223334556666 7887 77665
Q ss_pred ecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCC
Q 004149 263 WSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVD 341 (771)
Q Consensus 263 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~ 341 (771)
.+..|.++|+ .+++ ...+..+...+....| ||+.|+..+.+.
T Consensus 257 ---------------~dg~i~iwd~-----------------~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~--- 299 (445)
T 2ovr_B 257 ---------------YDFMVKVWDP-----------------ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDT--- 299 (445)
T ss_dssp ---------------TTSCEEEEEG-----------------GGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTS---
T ss_pred ---------------CCCEEEEEEC-----------------CCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCC---
Confidence 3347888887 4443 3455555566777777 889888777553
Q ss_pred CCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECC
Q 004149 342 SGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS 421 (771)
Q Consensus 342 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~ 421 (771)
.|.+||+.+++........ .....+++++++.| ++...++...+ +|+.
T Consensus 300 --------~i~i~d~~~~~~~~~~~~~---------------------~~~v~~~~~~~~~l-~~~~~dg~i~v--wd~~ 347 (445)
T 2ovr_B 300 --------SIRVWDVETGNCIHTLTGH---------------------QSLTSGMELKDNIL-VSGNADSTVKI--WDIK 347 (445)
T ss_dssp --------CEEEEETTTCCEEEEECCC---------------------CSCEEEEEEETTEE-EEEETTSCEEE--EETT
T ss_pred --------eEEEEECCCCCEEEEEcCC---------------------cccEEEEEEeCCEE-EEEeCCCeEEE--EECC
Confidence 4889998876532110000 01112345567644 55555555444 5777
Q ss_pred CCcEEEecCC-C-CCceeeEEeecCCEEEEEEeCCCCCCeEEEEEeccc
Q 004149 422 SGELLRITPA-E-SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 422 tg~~~~l~~~-~-~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~~~ 468 (771)
+++....... . .......++.+++.++....+ ..|.+.++.++
T Consensus 348 ~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d----g~v~iwd~~~~ 392 (445)
T 2ovr_B 348 TGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDD----GTVKLWDLKTG 392 (445)
T ss_dssp TCCEEEEECSTTSCSSCEEEEEECSSEEEEEETT----SEEEEEETTTC
T ss_pred CCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCC----CeEEEEECCCC
Confidence 7775544332 1 111223444466655544422 34666665443
No 461
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.98 E-value=8.7e-05 Score=80.16 Aligned_cols=185 Identities=10% Similarity=0.088 Sum_probs=103.9
Q ss_pred EEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCCc
Q 004149 104 VVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTF 181 (771)
Q Consensus 104 ~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~ 181 (771)
.++++||++|+.....+ .+.+| ..++......... +. +.+++| |++.|+..+.+.... .|
T Consensus 137 ~~~~~d~~~l~~g~~dg-----~i~iwd~~~~~~~~~~~~h~---~~------v~~l~~--~~~~l~sg~~dg~i~--vw 198 (435)
T 1p22_A 137 YCLQYDDQKIVSGLRDN-----TIKIWDKNTLECKRILTGHT---GS------VLCLQY--DERVIITGSSDSTVR--VW 198 (435)
T ss_dssp EEEECCSSEEEEEESSS-----CEEEEESSSCCEEEEECCCS---SC------EEEEEC--CSSEEEEEETTSCEE--EE
T ss_pred EEEEECCCEEEEEeCCC-----eEEEEeCCCCeEEEEEcCCC---Cc------EEEEEE--CCCEEEEEcCCCeEE--EE
Confidence 45667999998776543 35555 2333333332111 11 246666 888888877665432 33
Q ss_pred cCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCcee----eccCCCCCCccceEEEecCCCCCccE
Q 004149 182 SLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ----AVKGIPKSLSVGQVVWAPLNEGLHQY 257 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~----~l~~~~~~~~~~~~~wspDg~~~~~~ 257 (771)
+............+........|.+ +..+++.....|.+||+.+++.. .+ ......+..+.| |++.
T Consensus 199 d~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~--~~~~~~v~~~~~--~~~~---- 268 (435)
T 1p22_A 199 DVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVL--VGHRAAVNVVDF--DDKY---- 268 (435)
T ss_dssp ESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEE--CCCSSCEEEEEE--ETTE----
T ss_pred ECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEe--cCCCCcEEEEEe--CCCE----
Confidence 3222211111112222222333432 34556667789999999887643 23 233445566666 7776
Q ss_pred EEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCCccccceeecCCCCEEEEEec
Q 004149 258 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 258 l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~ 336 (771)
|+..+ .+..|.++|+ .+++ ...+..+...+....| +|+.|+..+.
T Consensus 269 l~s~~---------------~dg~i~vwd~-----------------~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~ 314 (435)
T 1p22_A 269 IVSAS---------------GDRTIKVWNT-----------------STCEFVRTLNGHKRGIACLQY--RDRLVVSGSS 314 (435)
T ss_dssp EEEEE---------------TTSEEEEEET-----------------TTCCEEEEEECCSSCEEEEEE--ETTEEEEEET
T ss_pred EEEEe---------------CCCeEEEEEC-----------------CcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeC
Confidence 66654 3347888897 4444 3455555556666666 5777776665
Q ss_pred CCCCCCCCccccccceeeecCCCCC
Q 004149 337 KSSVDSGAHSATDSLHRIDWPTNGN 361 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~~~~~ 361 (771)
+ ..|.+||+.+++.
T Consensus 315 d-----------g~i~iwd~~~~~~ 328 (435)
T 1p22_A 315 D-----------NTIRLWDIECGAC 328 (435)
T ss_dssp T-----------SCEEEEETTTCCE
T ss_pred C-----------CeEEEEECCCCCE
Confidence 4 3588999887653
No 462
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.96 E-value=0.0011 Score=68.01 Aligned_cols=161 Identities=11% Similarity=0.109 Sum_probs=100.7
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cC----CcceEEEecC-CcccccccCCCcccceeecCCCCeEEEEec
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQ----SQLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAE 172 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~-~~~~g~~~~~~~~~~~~wSpDg~~la~~~~ 172 (771)
.....+.|++++.+|.++-. ....|+.+. ++ .....++... ... .++++.+.+..|++...
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~---~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p----------~glavd~~~~~ly~~d~ 96 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDL---SQRMICSTQLDRAHGVSSYDTVISRDIQAP----------DGLAVDWIHSNIYWTDS 96 (316)
T ss_dssp SSEEEEEEETTTTEEEEEET---TTTEEEEEEC--------CEEEECSSCSCC----------CEEEEETTTTEEEEEET
T ss_pred CceEEEEEEeCCCEEEEEEC---CCCcEEEEECCCCCCCcccEEEEeCCCCCc----------CEEEEeecCCeEEEEEC
Confidence 44678999999888866543 234677777 33 2223333211 111 47888887777766522
Q ss_pred CCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCC
Q 004149 173 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 252 (771)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~ 252 (771)
....|.++++++...+.+. ...-..+..++..|++.
T Consensus 97 -------------------------------------------~~~~I~~~~~~g~~~~~~~-~~~~~~P~~iavdp~~g 132 (316)
T 1ijq_A 97 -------------------------------------------VLGTVSVADTKGVKRKTLF-RENGSKPRAIVVDPVHG 132 (316)
T ss_dssp -------------------------------------------TTTEEEEEETTSSSEEEEE-ECTTCCEEEEEEETTTT
T ss_pred -------------------------------------------CCCEEEEEeCCCCceEEEE-ECCCCCcceEEeCCCCC
Confidence 2367889998877666552 11223567888999887
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecC-CCCccccceeecCCCCEE
Q 004149 253 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFL 331 (771)
Q Consensus 253 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt-~~~~~~~~p~~SpDG~~l 331 (771)
. |+++.+. ....|+++++ ++...+.+. .........+|+|++++|
T Consensus 133 ~----ly~~d~~-------------~~~~I~~~~~-----------------dG~~~~~~~~~~~~~P~gla~d~~~~~l 178 (316)
T 1ijq_A 133 F----MYWTDWG-------------TPAKIKKGGL-----------------NGVDIYSLVTENIQWPNGITLDLLSGRL 178 (316)
T ss_dssp E----EEEEECS-------------SSCEEEEEET-----------------TSCCEEEEECSSCSCEEEEEEETTTTEE
T ss_pred E----EEEEccC-------------CCCeEEEEcC-----------------CCCCeEEEEECCCCCceEEEEeccCCEE
Confidence 6 7766421 1237999997 444444442 233446678999999999
Q ss_pred EEEecCCCCCCCCccccccceeeecCCCC
Q 004149 332 VFLSAKSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 332 ~f~~~~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
+|..... ..|+++|+++..
T Consensus 179 Y~~D~~~----------~~I~~~d~dg~~ 197 (316)
T 1ijq_A 179 YWVDSKL----------HSISSIDVNGGN 197 (316)
T ss_dssp EEEETTT----------TEEEEEETTSCS
T ss_pred EEEECCC----------CeEEEEecCCCc
Confidence 9887543 579999987543
No 463
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.95 E-value=0.0011 Score=66.41 Aligned_cols=111 Identities=16% Similarity=0.146 Sum_probs=57.5
Q ss_pred ccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCcccc
Q 004149 319 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 398 (771)
Q Consensus 319 ~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~ 398 (771)
.....+++||+.|+..... ..|+.+|.+ |+..-. +.. .. .....+..+
T Consensus 127 ~~~v~~~~~G~~lv~~~~~-----------~~v~~~d~~-G~~~w~----------~~~--~~--------~~~~~~~~~ 174 (276)
T 3no2_A 127 FRQINKNKKGNYLVPLFAT-----------SEVREIAPN-GQLLNS----------VKL--SG--------TPFSSAFLD 174 (276)
T ss_dssp CSCCEECTTSCEEEEETTT-----------TEEEEECTT-SCEEEE----------EEC--SS--------CCCEEEECT
T ss_pred ccCceECCCCCEEEEecCC-----------CEEEEECCC-CCEEEE----------EEC--CC--------CccceeEcC
Confidence 3445789999977644322 358888876 443110 000 00 122345678
Q ss_pred CCCEEEEEeeeCCeeEEEEEECCCCcEEE-ecCCC--C----CceeeEEeecCCEEEEEEeCCC------CCCeEEEEE
Q 004149 399 DGCTMLLSSIWGSSQVIISVNVSSGELLR-ITPAE--S----NFSWSLLTLDGDNIIAVSSSPV------DVPQVKYGY 464 (771)
Q Consensus 399 dg~~l~~~~~~~~~~~l~~~d~~tg~~~~-l~~~~--~----~~~~~~~s~d~~~l~~~~s~~~------~p~~l~~~~ 464 (771)
+|..|+. ... ...|+.+|.++|++.. +.... + ........++|+.++..+.+.. ...+++-++
T Consensus 175 ~g~~~v~-~~~--~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~ 250 (276)
T 3no2_A 175 NGDCLVA-CGD--AHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEID 250 (276)
T ss_dssp TSCEEEE-CBT--TSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEEC
T ss_pred CCCEEEE-eCC--CCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEEC
Confidence 8885543 332 2369999999887653 32211 1 1222344556665555443432 244566544
No 464
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.94 E-value=0.00043 Score=68.93 Aligned_cols=134 Identities=8% Similarity=-0.009 Sum_probs=73.3
Q ss_pred ceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhh
Q 004149 218 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 297 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 297 (771)
..|++++..+....... ......+..++++|||+ |+++.. ....|++++.
T Consensus 129 ~~i~~~~~~~~~~~~~~-~~~~~~p~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~---------- 178 (270)
T 1rwi_B 129 NRVVKLAAGSKTQTVLP-FTGLNDPDGVAVDNSGN-----VYVTDT--------------DNNRVVKLEA---------- 178 (270)
T ss_dssp TEEEEECTTCCSCEECC-CCSCCSCCCEEECTTCC-----EEEEEG--------------GGTEEEEECT----------
T ss_pred CEEEEEECCCceeEeec-cccCCCceeEEEeCCCC-----EEEEEC--------------CCCEEEEEec----------
Confidence 56777876554443331 11223567889999986 665541 1237889987
Q ss_pred hhhcCCCCCCcceecCCC-CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEeccc
Q 004149 298 ELKESSSEDLPVVNLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 376 (771)
Q Consensus 298 ~~~~~~~~~~~~~~lt~~-~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 376 (771)
.+......... ........+++|| .|++.... ...|++++..+........
T Consensus 179 -------~~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~----------~~~v~~~~~~~~~~~~~~~---------- 230 (270)
T 1rwi_B 179 -------ESNNQVVLPFTDITAPWGIAVDEAG-TVYVTEHN----------TNQVVKLLAGSTTSTVLPF---------- 230 (270)
T ss_dssp -------TTCCEEECCCSSCCSEEEEEECTTC-CEEEEETT----------TSCEEEECTTCSCCEECCC----------
T ss_pred -------CCCceEeecccCCCCceEEEECCCC-CEEEEECC----------CCcEEEEcCCCCcceeecc----------
Confidence 44443333222 2446678999999 45554432 2458888876533211100
Q ss_pred ccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECC
Q 004149 377 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS 421 (771)
Q Consensus 377 ~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~ 421 (771)
..+ ..+..+++++||+ |+++....+. |..+++.
T Consensus 231 ----~~~-----~~p~~i~~~~~g~-l~v~~~~~~~--v~~~~~~ 263 (270)
T 1rwi_B 231 ----TGL-----NTPLAVAVDSDRT-VYVADRGNDR--VVKLTSL 263 (270)
T ss_dssp ----CSC-----SCEEEEEECTTCC-EEEEEGGGTE--EEEECCC
T ss_pred ----CCC-----CCceeEEECCCCC-EEEEECCCCE--EEEEcCC
Confidence 000 1234567888986 7666554443 4444443
No 465
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.93 E-value=0.0036 Score=62.83 Aligned_cols=175 Identities=6% Similarity=-0.037 Sum_probs=94.9
Q ss_pred ceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhh
Q 004149 218 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 297 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 297 (771)
..|+++|.++.....+. ......+..++++|||+ |+++.. ....|++++.
T Consensus 100 ~~i~~~d~~g~~~~~~~-~~~~~~~~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~---------- 149 (286)
T 1q7f_A 100 HQIQIYNQYGQFVRKFG-ATILQHPRGVTVDNKGR-----IIVVEC--------------KVMRVIIFDQ---------- 149 (286)
T ss_dssp CEEEEECTTSCEEEEEC-TTTCSCEEEEEECTTSC-----EEEEET--------------TTTEEEEECT----------
T ss_pred CEEEEECCCCcEEEEec-CccCCCceEEEEeCCCC-----EEEEEC--------------CCCEEEEEcC----------
Confidence 57888885554444442 22223567889999986 665531 2237888885
Q ss_pred hhhcCCCCCCcceecC--CCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecc
Q 004149 298 ELKESSSEDLPVVNLT--ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 375 (771)
Q Consensus 298 ~~~~~~~~~~~~~~lt--~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 375 (771)
++.....+. .........+++|||+ |++.... ...|+++|..+.....+
T Consensus 150 -------~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~----------~~~i~~~~~~g~~~~~~----------- 200 (286)
T 1q7f_A 150 -------NGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNR----------AHCVKVFNYEGQYLRQI----------- 200 (286)
T ss_dssp -------TSCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGG----------GTEEEEEETTCCEEEEE-----------
T ss_pred -------CCCEEEEeCCCCccCCcEEEEECCCCC-EEEEECC----------CCEEEEEcCCCCEEEEE-----------
Confidence 433333332 2223467889999998 4444322 24688888643211111
Q ss_pred cccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC--CceeeEEeecCCEEEEEEeC
Q 004149 376 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES--NFSWSLLTLDGDNIIAVSSS 453 (771)
Q Consensus 376 ~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~--~~~~~~~s~d~~~l~~~~s~ 453 (771)
.. .+.+ ..+..+++++||+ |+++....+ ..|.+++.++..+..+..... ......++++|+ ++++ +.
T Consensus 201 ~~--~g~~-----~~p~~i~~d~~G~-l~v~~~~~~-~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~-l~vs-~~ 269 (286)
T 1q7f_A 201 GG--EGIT-----NYPIGVGINSNGE-ILIADNHNN-FNLTIFTQDGQLISALESKVKHAQCFDVALMDDGS-VVLA-SK 269 (286)
T ss_dssp SC--TTTS-----CSEEEEEECTTCC-EEEEECSSS-CEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTE-EEEE-ET
T ss_pred cc--CCcc-----CCCcEEEECCCCC-EEEEeCCCC-EEEEEECCCCCEEEEEcccCCCCcceeEEECCCCc-EEEE-CC
Confidence 00 0101 1234577899996 555543222 257777875555555543322 123456777775 5555 32
Q ss_pred CCCCCeEEEEEe
Q 004149 454 PVDVPQVKYGYF 465 (771)
Q Consensus 454 ~~~p~~l~~~~~ 465 (771)
+ .+|.+.+.
T Consensus 270 -~--~~v~v~~~ 278 (286)
T 1q7f_A 270 -D--YRLYIYRY 278 (286)
T ss_dssp -T--TEEEEEEC
T ss_pred -C--CeEEEEEc
Confidence 2 45666554
No 466
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.93 E-value=0.00092 Score=68.45 Aligned_cols=181 Identities=11% Similarity=0.003 Sum_probs=109.8
Q ss_pred ceEEEEEccCCce-eeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhh
Q 004149 218 PSLFVININSGEV-QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 296 (771)
Q Consensus 218 ~~l~v~d~~~~~~-~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 296 (771)
..|++++++++.. +.+. ...-..+..+++.+.+.. |+++-. ....|+++++
T Consensus 57 ~~I~r~~~~g~~~~~~~~-~~~l~~p~glavd~~~g~----ly~~d~--------------~~~~I~~~~~--------- 108 (318)
T 3sov_A 57 EAIKRTEFNKTESVQNVV-VSGLLSPDGLACDWLGEK----LYWTDS--------------ETNRIEVSNL--------- 108 (318)
T ss_dssp TEEEEEETTSSSCCCEEE-EECCSCCCEEEEETTTTE----EEEEET--------------TTTEEEEEET---------
T ss_pred CcEEEEEccCCCceEEEE-cCCCCCccEEEEEcCCCe----EEEEEC--------------CCCEEEEEEC---------
Confidence 6788899887642 1220 112224567888887776 776541 2237899997
Q ss_pred hhhhcCCCCCCcceecC-CCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecc
Q 004149 297 LELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 375 (771)
Q Consensus 297 ~~~~~~~~~~~~~~~lt-~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 375 (771)
++...+.+. .........++.|++..|+|..... ...|+++++++...+.+...
T Consensus 109 --------dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~---------~~~I~r~~~dG~~~~~~~~~-------- 163 (318)
T 3sov_A 109 --------DGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGE---------VPKIERAGMDGSSRFIIINS-------- 163 (318)
T ss_dssp --------TSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSS---------SCEEEEEETTSCSCEEEECS--------
T ss_pred --------CCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCC---------CCEEEEEEcCCCCeEEEEEC--------
Confidence 555444443 3344567788999888888876432 25699999876443221100
Q ss_pred cccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCC
Q 004149 376 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPV 455 (771)
Q Consensus 376 ~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~ 455 (771)
.-. ....++|++++++||++-. ....|+++++++...+.+..... ..-..++.+++.+|.+..
T Consensus 164 ----~l~-------~Pnglavd~~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~~~-~~P~glav~~~~lywtd~--- 226 (318)
T 3sov_A 164 ----EIY-------WPNGLTLDYEEQKLYWADA--KLNFIHKSNLDGTNRQAVVKGSL-PHPFALTLFEDILYWTDW--- 226 (318)
T ss_dssp ----SCS-------CEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSCC-SCEEEEEEETTEEEEEET---
T ss_pred ----CCC-------CccEEEEeccCCEEEEEEC--CCCEEEEEcCCCCceEEEecCCC-CCceEEEEeCCEEEEEec---
Confidence 001 1346789998888988754 44578999998766665554222 122345557778877743
Q ss_pred CCCeEEEEEeccc
Q 004149 456 DVPQVKYGYFVDK 468 (771)
Q Consensus 456 ~p~~l~~~~~~~~ 468 (771)
....|++++..++
T Consensus 227 ~~~~V~~~~~~~G 239 (318)
T 3sov_A 227 STHSILACNKYTG 239 (318)
T ss_dssp TTTEEEEEETTTC
T ss_pred CCCeEEEEECCCC
Confidence 3456777775444
No 467
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.89 E-value=0.0011 Score=70.27 Aligned_cols=162 Identities=10% Similarity=0.097 Sum_probs=101.9
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCC-----cceEEEecCCcccccccCCCcccceeecCCCCeEEEEecC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS-----QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 173 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~ 173 (771)
.....++|++.+..|.++.. ....|+.+...+ ....++...... ..++++.+.+..|++...
T Consensus 112 ~~~~~l~~d~~~~~lywsD~---~~~~I~~~~~~g~~~~~~~~~~~~~~~~~---------p~glavD~~~~~lY~~d~- 178 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDL---SQRMICSTQLDRAHGVSSYDTVISRDIQA---------PDGLAVDWIHSNIYWTDS- 178 (400)
T ss_dssp SCEEEEEEETTTTEEEEEET---TTTEEEEEEC------CCCEEEECSSCSC---------EEEEEEETTTTEEEEEET-
T ss_pred CcceEEeeeeccCceEEEec---CCCeEEEEEcccCCCCCcceEEEeCCCCC---------cccEEEEecCCceEEEEC-
Confidence 45678899998888866533 234577766322 223333211111 147778887777766521
Q ss_pred CCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCC-CCccceEEEecCCC
Q 004149 174 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK-SLSVGQVVWAPLNE 252 (771)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~-~~~~~~~~wspDg~ 252 (771)
....|.++++++...+.+ ... -..+..++..|.+.
T Consensus 179 ------------------------------------------~~~~I~~~~~~g~~~~~l--~~~~~~~P~~iavdp~~g 214 (400)
T 3p5b_L 179 ------------------------------------------VLGTVSVADTKGVKRKTL--FRENGSKPRAIVVDPVHG 214 (400)
T ss_dssp ------------------------------------------TTTEEEEECTTTCSEEEE--EECSSCCEEEEEEETTTT
T ss_pred ------------------------------------------CCCeEEEEeCCCCceEEE--EeCCCCCcceEEEecccC
Confidence 235788999988776666 332 23467789999877
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecC-CCCccccceeecCCCCEE
Q 004149 253 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFL 331 (771)
Q Consensus 253 ~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt-~~~~~~~~p~~SpDG~~l 331 (771)
. |+++-+. ....|+++++ ++...+.+. .........+++|+++.|
T Consensus 215 ~----ly~td~~-------------~~~~I~~~~~-----------------dG~~~~~~~~~~l~~P~glavd~~~~~l 260 (400)
T 3p5b_L 215 F----MYWTDWG-------------TPAKIKKGGL-----------------NGVDIYSLVTENIQWPNGITLDLLSGRL 260 (400)
T ss_dssp E----EEEEECS-------------SSCCEEEEET-----------------TSCSCEEEECSSCSCEEEEEEETTTTEE
T ss_pred e----EEEEeCC-------------CCCEEEEEeC-----------------CCCccEEEEECCCCceEEEEEEeCCCEE
Confidence 6 7665432 1237999998 555544443 333456788999999999
Q ss_pred EEEecCCCCCCCCccccccceeeecCCCCC
Q 004149 332 VFLSAKSSVDSGAHSATDSLHRIDWPTNGN 361 (771)
Q Consensus 332 ~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~ 361 (771)
+|..... ..|+++|+++...
T Consensus 261 Y~aD~~~----------~~I~~~d~dG~~~ 280 (400)
T 3p5b_L 261 YWVDSKL----------HSISSIDVNGGNR 280 (400)
T ss_dssp EEEETTT----------TEEEEEETTSCCC
T ss_pred EEEECCC----------CEEEEEeCCCCcc
Confidence 9987542 5799999876443
No 468
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.88 E-value=0.00029 Score=68.59 Aligned_cols=178 Identities=13% Similarity=0.181 Sum_probs=105.9
Q ss_pred CceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhh
Q 004149 217 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 296 (771)
Q Consensus 217 ~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 296 (771)
...|.++|+++|++..-...+ ........+++|++ |+...|. ...++++|.
T Consensus 64 ~S~v~~vD~~Tgkv~~~~~l~--~~~FgeGit~~g~~----ly~ltw~--------------~~~v~v~D~--------- 114 (262)
T 3nol_A 64 RSSIRKVDIESGKTLQQIELG--KRYFGEGISDWKDK----IVGLTWK--------------NGLGFVWNI--------- 114 (262)
T ss_dssp EEEEEEECTTTCCEEEEEECC--TTCCEEEEEEETTE----EEEEESS--------------SSEEEEEET---------
T ss_pred CceEEEEECCCCcEEEEEecC--CccceeEEEEeCCE----EEEEEee--------------CCEEEEEEC---------
Confidence 368999999999876552122 23333446677887 8777653 337999998
Q ss_pred hhhhcCCCCCCcc-eecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecc
Q 004149 297 LELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 375 (771)
Q Consensus 297 ~~~~~~~~~~~~~-~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 375 (771)
++.+. .++.-.. ....+++||+.|+. ++. ..+|+++|.++.+... .+.+.
T Consensus 115 --------~t~~~~~ti~~~~---eG~glt~dg~~L~~-SdG----------s~~i~~iDp~T~~v~~-------~I~V~ 165 (262)
T 3nol_A 115 --------RNLRQVRSFNYDG---EGWGLTHNDQYLIM-SDG----------TPVLRFLDPESLTPVR-------TITVT 165 (262)
T ss_dssp --------TTCCEEEEEECSS---CCCCEEECSSCEEE-CCS----------SSEEEEECTTTCSEEE-------EEECE
T ss_pred --------ccCcEEEEEECCC---CceEEecCCCEEEE-ECC----------CCeEEEEcCCCCeEEE-------EEEec
Confidence 55543 3333221 33466789987654 432 2569999988755311 11111
Q ss_pred cccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC-------------CCceeeEEee
Q 004149 376 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE-------------SNFSWSLLTL 442 (771)
Q Consensus 376 ~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~-------------~~~~~~~~s~ 442 (771)
.. ...+ ..+..+.|. || +|++. .+. ...|.+||+++|++.....-. ......++++
T Consensus 166 ~~--g~~~-----~~lNELe~~-~G-~lyan-~w~-~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp 234 (262)
T 3nol_A 166 AH--GEEL-----PELNELEWV-DG-EIFAN-VWQ-TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDK 234 (262)
T ss_dssp ET--TEEC-----CCEEEEEEE-TT-EEEEE-ETT-SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEET
T ss_pred cC--Cccc-----cccceeEEE-CC-EEEEE-Ecc-CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcC
Confidence 00 0001 012235676 66 46543 333 347999999999987553321 1234578899
Q ss_pred cCCEEEEEEeCCCCCCeEEEEEec
Q 004149 443 DGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 443 d~~~l~~~~s~~~~p~~l~~~~~~ 466 (771)
+++.|+.+.-.. +.+|.+.+.
T Consensus 235 ~~~~lfVTGK~W---p~~~ev~~~ 255 (262)
T 3nol_A 235 EHHRLFVTGKLW---PKVFEITLT 255 (262)
T ss_dssp TTTEEEEEETTC---SEEEEEEEE
T ss_pred CCCEEEEECCCC---CceEEEEEe
Confidence 999999888766 557766654
No 469
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.85 E-value=9.7e-05 Score=84.57 Aligned_cols=179 Identities=8% Similarity=-0.037 Sum_probs=104.5
Q ss_pred ceEEEEEccC----CceeeccCCCC-CCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccc
Q 004149 218 PSLFVININS----GEVQAVKGIPK-SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKS 292 (771)
Q Consensus 218 ~~l~v~d~~~----~~~~~l~~~~~-~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 292 (771)
..|+++++++ .....+ ... -..+..+++.+.+.. |+++-. ....|+++++
T Consensus 428 ~~I~~~~~~g~~~~~~~~~~--i~~~~~~P~glavD~~~g~----LY~tD~--------------~~~~I~v~d~----- 482 (699)
T 1n7d_A 428 RMICSTQLDRAHGVSSYDTV--ISRDIQAPDGLAVDWIHSN----IYWTDS--------------VLGTVSVADT----- 482 (699)
T ss_dssp TSBEEEESCCCCC-CCCCCB--CCSCC--CCCEECCCSSSB----CEECCT--------------TTSCEEEEBS-----
T ss_pred CeEEEEecCCCCCCcceEEE--EeCCCCCcceEEEEeeCCc----EEEEec--------------cCCeEEEEec-----
Confidence 5678888875 333333 222 124556777766666 665431 2237899987
Q ss_pred hhhhhhhhcCCCCCCcceecCCC-CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeE
Q 004149 293 EASELELKESSSEDLPVVNLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDV 371 (771)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~lt~~-~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 371 (771)
++...+.+... .......+++|++.+|+|..... ...|+++++.+...+.+...
T Consensus 483 ------------dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~---------~~~I~~~~~dG~~~~~l~~~---- 537 (699)
T 1n7d_A 483 ------------KGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGT---------PAKIKKGGLNGVDIYSLVTE---- 537 (699)
T ss_dssp ------------SSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSS---------SCCEEBCCSSSCCCCEESCS----
T ss_pred ------------CCCceEEEEeCCCCCcceEEEccCCCcEEEcccCC---------CCeEEEEeCCCCCeeEEEeC----
Confidence 55555554432 34467789999988888766321 24688888765433211100
Q ss_pred EecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC-CceeeEEeecCCEEEEE
Q 004149 372 IPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES-NFSWSLLTLDGDNIIAV 450 (771)
Q Consensus 372 ~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~-~~~~~~~s~d~~~l~~~ 450 (771)
... ....++|++++++||++.. ....|+++++++...+.+..... ...-..++.+++.||++
T Consensus 538 --------~l~-------~PnGlavd~~~~~LY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywt 600 (699)
T 1n7d_A 538 --------NIQ-------WPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWT 600 (699)
T ss_dssp --------SCS-------SCCCEEECTTTCCEEEEET--TTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEE
T ss_pred --------CCC-------CccEEEEeccCCEEEEEec--CCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEE
Confidence 001 2357889999888988753 44578899987766666654221 11122455577777766
Q ss_pred EeCCCCCCeEEEEEec
Q 004149 451 SSSPVDVPQVKYGYFV 466 (771)
Q Consensus 451 ~s~~~~p~~l~~~~~~ 466 (771)
.. ...+|++++..
T Consensus 601 d~---~~~~V~~~d~~ 613 (699)
T 1n7d_A 601 DI---INEAIFSANRL 613 (699)
T ss_dssp CS---TTTCEEEEETT
T ss_pred eC---CCCeEEEEEcc
Confidence 63 23457777643
No 470
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.80 E-value=0.003 Score=72.72 Aligned_cols=182 Identities=8% Similarity=-0.054 Sum_probs=109.4
Q ss_pred ceEEEEEccCC----ceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccch
Q 004149 218 PSLFVININSG----EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 293 (771)
Q Consensus 218 ~~l~v~d~~~~----~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 293 (771)
..|+++++++. ..+.+. ...-..+..+++.+.++. |+++-. ....|+++++
T Consensus 446 ~~I~~~~l~g~~~~~~~~~vi-~~~l~~P~GLAvD~~~~~----LY~tD~--------------~~~~I~v~~l------ 500 (791)
T 3m0c_C 446 RMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSN----IYWTDS--------------VLGTVSVADT------ 500 (791)
T ss_dssp TEEEEEEC--------CEEEE-CSSCSCCCEEEEETTTTE----EEEEET--------------TTTEEEEEET------
T ss_pred eeEEEEeccCCCCCcceeEEE-ecCCCCcceeeeeecCCc----EEEEec--------------CCCeEEEEeC------
Confidence 57888888763 333331 112335667888888886 777642 2337999998
Q ss_pred hhhhhhhcCCCCCCcceecCC-CCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEE
Q 004149 294 ASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVI 372 (771)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~lt~-~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 372 (771)
++...+.|.. ........++.|.+..|+|..... ..+|+++++++...+.+...
T Consensus 501 -----------dG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~---------~~~I~~~~~dG~~~~~lv~~----- 555 (791)
T 3m0c_C 501 -----------KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT---------PAKIKKGGLNGVDIYSLVTE----- 555 (791)
T ss_dssp -----------TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS---------SCEEEEEETTSCCEEEEECS-----
T ss_pred -----------CCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCC---------CCeEEEEecCCCceEEEEeC-----
Confidence 5555555443 334577889999988898887432 24699999876443221110
Q ss_pred ecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC-CceeeEEeecCCEEEEEE
Q 004149 373 PVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES-NFSWSLLTLDGDNIIAVS 451 (771)
Q Consensus 373 ~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~-~~~~~~~s~d~~~l~~~~ 451 (771)
.-. .+..+++.+++++||++- .....|+++++++...+.+..... ...-..++.+++.||++-
T Consensus 556 -------~l~-------~P~GLavD~~~~~LYwaD--~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD 619 (791)
T 3m0c_C 556 -------NIQ-------WPNGITLDLLSGRLYWVD--SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 619 (791)
T ss_dssp -------SCS-------CEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEE
T ss_pred -------CCC-------CceEEEEecCCCeEEEEe--CCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEE
Confidence 000 123566777778888874 344579999998777776654322 122245667788887766
Q ss_pred eCCCCCCeEEEEEeccc
Q 004149 452 SSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 452 s~~~~p~~l~~~~~~~~ 468 (771)
. ....|++++..++
T Consensus 620 ~---~~~~I~~~dk~tG 633 (791)
T 3m0c_C 620 I---INEAIFSANRLTG 633 (791)
T ss_dssp T---TTTEEEEEETTTC
T ss_pred C---CCCEEEEEeCCCC
Confidence 3 3356777664433
No 471
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.78 E-value=0.00081 Score=72.46 Aligned_cols=211 Identities=9% Similarity=-0.004 Sum_probs=110.5
Q ss_pred ceeEEEEEEeecCCCCccceeecCCccccccceEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCcceEEEecCCcccc
Q 004149 70 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHG 147 (771)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g 147 (771)
..+.+.++++.... ....+... .+.+...+| ||+.|+.....+ .+.+| ..++........ .+
T Consensus 151 ~dg~i~iwd~~~~~-~~~~~~~h-----~~~v~~l~~--~~~~l~sg~~dg-----~i~vwd~~~~~~~~~~~~h---~~ 214 (435)
T 1p22_A 151 RDNTIKIWDKNTLE-CKRILTGH-----TGSVLCLQY--DERVIITGSSDS-----TVRVWDVNTGEMLNTLIHH---CE 214 (435)
T ss_dssp SSSCEEEEESSSCC-EEEEECCC-----SSCEEEEEC--CSSEEEEEETTS-----CEEEEESSSCCEEEEECCC---CS
T ss_pred CCCeEEEEeCCCCe-EEEEEcCC-----CCcEEEEEE--CCCEEEEEcCCC-----eEEEEECCCCcEEEEEcCC---CC
Confidence 44567777763321 11222211 244556666 888887765543 34555 333333322211 11
Q ss_pred cccCCCcccceeecCCCCeEEEEecCCCCCCCCccCCCCCCC---CCCccCCCCCCcccccCCcCcccCCccCceEEEEE
Q 004149 148 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGG---SSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVIN 224 (771)
Q Consensus 148 ~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d 224 (771)
.+..+.|++ ..|+..+.+.... .|+....... .....+......+.| +....+++..+..|.+||
T Consensus 215 ------~v~~l~~~~--~~l~s~s~dg~i~--vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd 282 (435)
T 1p22_A 215 ------AVLHLRFNN--GMMVTCSKDRSIA--VWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWN 282 (435)
T ss_dssp ------CEEEEECCT--TEEEEEETTSCEE--EEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE
T ss_pred ------cEEEEEEcC--CEEEEeeCCCcEE--EEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEE
Confidence 125777764 4666666554322 2322111111 111112222222333 333455566678999999
Q ss_pred ccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCC
Q 004149 225 INSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSS 304 (771)
Q Consensus 225 ~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 304 (771)
+.+++..... ......+..+.| +++. |+..+ .+..|.++|+
T Consensus 283 ~~~~~~~~~~-~~~~~~v~~~~~--~~~~----l~~g~---------------~dg~i~iwd~----------------- 323 (435)
T 1p22_A 283 TSTCEFVRTL-NGHKRGIACLQY--RDRL----VVSGS---------------SDNTIRLWDI----------------- 323 (435)
T ss_dssp TTTCCEEEEE-ECCSSCEEEEEE--ETTE----EEEEE---------------TTSCEEEEET-----------------
T ss_pred CCcCcEEEEE-cCCCCcEEEEEe--CCCE----EEEEe---------------CCCeEEEEEC-----------------
Confidence 9988765441 223334555566 5554 55544 3347888998
Q ss_pred CCCc-ceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCC
Q 004149 305 EDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 305 ~~~~-~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
.+++ ...+..+...+....| ||+.|+..+.+. .|.+||+.++.
T Consensus 324 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg-----------~i~vwd~~~~~ 367 (435)
T 1p22_A 324 ECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDG-----------KIKVWDLVAAL 367 (435)
T ss_dssp TTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTS-----------CEEEEEHHHHT
T ss_pred CCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCC-----------cEEEEECCCCC
Confidence 5444 4556656666777777 888887776553 48888886544
No 472
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.77 E-value=0.00022 Score=81.64 Aligned_cols=146 Identities=14% Similarity=0.135 Sum_probs=87.8
Q ss_pred CceEEEEEccCCceeeccCCCC-CCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhh
Q 004149 217 QPSLFVININSGEVQAVKGIPK-SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 295 (771)
Q Consensus 217 ~~~l~v~d~~~~~~~~l~~~~~-~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~ 295 (771)
...|+++++++...+.+ ... -..+..+++.|++.. |+++.+. ....|+++++
T Consensus 474 ~~~I~v~d~dg~~~~~l--~~~~~~~P~giavDp~~g~----ly~td~~-------------~~~~I~~~~~-------- 526 (699)
T 1n7d_A 474 LGTVSVADTKGVKRKTL--FREQGSKPRAIVVDPVHGF----MYWTDWG-------------TPAKIKKGGL-------- 526 (699)
T ss_dssp TSCEEEEBSSSCCEEEE--CCCSSCCCCCEECCSSSSC----CEECCCS-------------SSCCEEBCCS--------
T ss_pred CCeEEEEecCCCceEEE--EeCCCCCcceEEEccCCCc----EEEcccC-------------CCCeEEEEeC--------
Confidence 36789999988877666 333 235678899998887 7765421 1237888887
Q ss_pred hhhhhcCCCCCCcceecC-CCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEec
Q 004149 296 ELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 374 (771)
Q Consensus 296 ~~~~~~~~~~~~~~~~lt-~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 374 (771)
++...+.+. ........++|+|++++|+|+.... ..|+++++.+...+.+...
T Consensus 527 ---------dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~----------~~I~~~d~dG~~~~~~~~~------- 580 (699)
T 1n7d_A 527 ---------NGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL----------HSISSIDVNGGNRKTILED------- 580 (699)
T ss_dssp ---------SSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTT----------TEEEEECSSSSCCEEECCC-------
T ss_pred ---------CCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCC----------CeEEEEccCCCceEEEEec-------
Confidence 444433332 3333466799999999998887542 5699999875333211110
Q ss_pred ccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 004149 375 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 429 (771)
Q Consensus 375 ~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 429 (771)
...++ ....+++ |+..||++. .....|++++..+|+.....
T Consensus 581 -----~~~~~-----~P~glav--d~~~lywtd--~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 581 -----EKRLA-----HPFSLAV--FEDKVFWTD--IINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp -----SSSCS-----SCCCCEE--ETTEEEEEC--STTTCEEEEETTTEEEEECC
T ss_pred -----CCcCC-----CceEeEE--ECCEEEEEe--CCCCeEEEEEccCCCceEEe
Confidence 00010 1223333 555677665 23346788887777655443
No 473
>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*
Probab=97.75 E-value=0.00019 Score=69.56 Aligned_cols=135 Identities=16% Similarity=0.169 Sum_probs=81.6
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHH------------------HHHHHCCcEEEEECCCCCC
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSL------------------AFLSSVGYSLLIVNYRGSL 578 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~------------------~~la~~G~~V~~~d~rG~~ 578 (771)
.+..+..|++.... .....|+|++++|||++.... +.... ..+ .+-..++.+|.+-..
T Consensus 30 ~~~~lFywf~es~~--~~~~~Pl~lwlnGGPGcSS~~-~g~~~E~GP~~v~~~~~~l~~N~~sW-~~~anvlfiDqPvGt 105 (255)
T 1whs_A 30 AGRSLFYLLQEAPE--DAQPAPLVLWLNGGPGCSSVA-YGASEELGAFRVKPRGAGLVLNEYRW-NKVANVLFLDSPAGV 105 (255)
T ss_dssp TTEEEEEEEECCCG--GGCSCCEEEEECCTTTBCTTT-THHHHTSSSEEECGGGCCEEECTTCG-GGTSEEEEECCSTTS
T ss_pred CCcEEEEEEEEecC--CCCCCCEEEEECCCCchHHHH-HHHHhccCCeEecCCCCeeeeCcccc-cccCCEEEEecCCCC
Confidence 46678888876542 335689999999999875322 01100 001 123789999965333
Q ss_pred CCChhhhhcCC-CCccccchhhHHHHHHHHHH-cCCCCCCeEEEEEcChhHHHHHHHHHhC------CCceeEEEecCCc
Q 004149 579 GFGEEALQSLP-GKVGSQDVNDVLTAIDHVID-MGLANPSKVTVVGGSHGGFLTTHLIGQA------PDKFVAAAARNPL 650 (771)
Q Consensus 579 ~~g~~~~~~~~-~~~~~~~~~D~~~~i~~l~~-~~~~d~~ri~l~G~S~GG~~a~~~a~~~------p~~~~a~v~~~p~ 650 (771)
|+......... ........+|+..+++...+ .+.....++.|+|.|+||..+..+|..- .-.++++++.+|+
T Consensus 106 GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~ 185 (255)
T 1whs_A 106 GFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGL 185 (255)
T ss_dssp TTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEEC
T ss_pred ccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCc
Confidence 44322111000 01112235666666654444 3445567899999999999988877531 2357999999999
Q ss_pred cchhh
Q 004149 651 CNLAL 655 (771)
Q Consensus 651 ~~~~~ 655 (771)
++...
T Consensus 186 ~d~~~ 190 (255)
T 1whs_A 186 IDDYH 190 (255)
T ss_dssp CBHHH
T ss_pred cCHHH
Confidence 88643
No 474
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.75 E-value=0.0044 Score=69.69 Aligned_cols=162 Identities=10% Similarity=0.039 Sum_probs=107.3
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
.......|.+++..|.++ +. ....|+.+. +++....++...... ..++++.+.++.|++.-.
T Consensus 37 ~~~~~l~~d~~~~~lywt-D~--~~~~I~r~~~~g~~~~~v~~~g~~~---------P~GlAvD~~~~~LY~tD~----- 99 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWT-DI--SLKTISRAFMNGSALEHVVEFGLDY---------PEGMAVDWLGKNLYWADT----- 99 (628)
T ss_dssp SCEEEEEEETTTTEEEEE-ET--TTTEEEEEETTSCSCEEEECSSCSC---------CCEEEEETTTTEEEEEET-----
T ss_pred CceEEEEEECCCCEEEEE-EC--CCCeEEEEECCCCCcEEEEeCCCCC---------cceEEEEeCCCEEEEEEC-----
Confidence 346678999998888655 33 234677777 444444444332111 147888888888876521
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccE
Q 004149 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 257 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~ 257 (771)
....|.+++++++..+.+. ...-..+..++..|....
T Consensus 100 --------------------------------------~~~~I~v~~~dG~~~~~l~-~~~l~~P~~iavdp~~G~---- 136 (628)
T 4a0p_A 100 --------------------------------------GTNRIEVSKLDGQHRQVLV-WKDLDSPRALALDPAEGF---- 136 (628)
T ss_dssp --------------------------------------TTTEEEEEETTSTTCEEEE-CSSCCCEEEEEEETTTTE----
T ss_pred --------------------------------------CCCEEEEEecCCCcEEEEE-eCCCCCcccEEEccCCCe----
Confidence 2368999999887766662 122235678889987665
Q ss_pred EEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecC
Q 004149 258 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 337 (771)
Q Consensus 258 l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~ 337 (771)
|+++-|. ....|+++++ ++...+.+..........++++++++|+|....
T Consensus 137 lY~tD~g-------------~~~~I~r~~~-----------------dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~ 186 (628)
T 4a0p_A 137 MYWTEWG-------------GKPKIDRAAM-----------------DGSERTTLVPNVGRANGLTIDYAKRRLYWTDLD 186 (628)
T ss_dssp EEEEECS-------------SSCEEEEEET-----------------TSCSCEEEECSCSSEEEEEEETTTTEEEEEETT
T ss_pred EEEeCCC-------------CCCEEEEEeC-----------------CCCceEEEECCCCCcceEEEccccCEEEEEECC
Confidence 7766432 1348999998 666666655555557788999999999998865
Q ss_pred CCCCCCCccccccceeeecCCCC
Q 004149 338 SSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 338 ~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
. ..|+++|+++..
T Consensus 187 ~----------~~I~~~d~dG~~ 199 (628)
T 4a0p_A 187 T----------NLIESSNMLGLN 199 (628)
T ss_dssp T----------TEEEEEETTSCS
T ss_pred C----------CEEEEEcCCCCc
Confidence 3 569999987644
No 475
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.67 E-value=0.0017 Score=63.20 Aligned_cols=202 Identities=11% Similarity=0.017 Sum_probs=112.6
Q ss_pred eEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCCC
Q 004149 102 SAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 180 (771)
Q Consensus 102 ~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~~ 180 (771)
+...|+ || +| |.+....+...+..++ ..++..+.+.++.... +...+++|.+|+.+..
T Consensus 46 qGL~~~-~~-~L-yestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~F----------geGit~~g~~ly~ltw-------- 104 (262)
T 3nol_A 46 EGFFYR-NG-YF-YESTGLNGRSSIRKVDIESGKTLQQIELGKRYF----------GEGISDWKDKIVGLTW-------- 104 (262)
T ss_dssp EEEEEE-TT-EE-EEEEEETTEEEEEEECTTTCCEEEEEECCTTCC----------EEEEEEETTEEEEEES--------
T ss_pred ceEEEE-CC-EE-EEECCCCCCceEEEEECCCCcEEEEEecCCccc----------eeEEEEeCCEEEEEEe--------
Confidence 456777 55 44 6666544566788888 6777766666644331 3345667877765522
Q ss_pred ccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEE
Q 004149 181 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVF 260 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~ 260 (771)
....++++|.++.++..- .+... .....++||+. |+.
T Consensus 105 -----------------------------------~~~~v~v~D~~t~~~~~t--i~~~~--eG~glt~dg~~----L~~ 141 (262)
T 3nol_A 105 -----------------------------------KNGLGFVWNIRNLRQVRS--FNYDG--EGWGLTHNDQY----LIM 141 (262)
T ss_dssp -----------------------------------SSSEEEEEETTTCCEEEE--EECSS--CCCCEEECSSC----EEE
T ss_pred -----------------------------------eCCEEEEEECccCcEEEE--EECCC--CceEEecCCCE----EEE
Confidence 237899999998876543 22221 23456689986 554
Q ss_pred EeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eecCC--CCccc---cceeecCCCCEEEEE
Q 004149 261 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTE--SISSA---FFPRFSPDGKFLVFL 334 (771)
Q Consensus 261 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt~--~~~~~---~~p~~SpDG~~l~f~ 334 (771)
++ ....|+.+|. ++.+. .++.- ..... ....|. ||+ |+ .
T Consensus 142 -Sd--------------Gs~~i~~iDp-----------------~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-ly-a 186 (262)
T 3nol_A 142 -SD--------------GTPVLRFLDP-----------------ESLTPVRTITVTAHGEELPELNELEWV-DGE-IF-A 186 (262)
T ss_dssp -CC--------------SSSEEEEECT-----------------TTCSEEEEEECEETTEECCCEEEEEEE-TTE-EE-E
T ss_pred -EC--------------CCCeEEEEcC-----------------CCCeEEEEEEeccCCccccccceeEEE-CCE-EE-E
Confidence 42 2347999997 55432 23222 11121 234565 774 44 4
Q ss_pred ecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeE
Q 004149 335 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 414 (771)
Q Consensus 335 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 414 (771)
..-. ...|.++|.++++..... ++..+...... ..+ ....+..++|+|++++||++. ..+..
T Consensus 187 n~w~---------~~~I~vIDp~tG~V~~~I----d~~~L~~~~~~-~~~--~~~vlNGIA~dp~~~~lfVTG--K~Wp~ 248 (262)
T 3nol_A 187 NVWQ---------TNKIVRIDPETGKVTGII----DLNGILAEAGP-LPS--PIDVLNGIAWDKEHHRLFVTG--KLWPK 248 (262)
T ss_dssp EETT---------SSEEEEECTTTCBEEEEE----ECTTGGGGSCS-CCS--SCCCEEEEEEETTTTEEEEEE--TTCSE
T ss_pred EEcc---------CCeEEEEECCCCcEEEEE----ECCcCcccccc-ccC--cCCceEEEEEcCCCCEEEEEC--CCCCc
Confidence 3322 357999999887752110 00000000000 000 001235789999999887764 56678
Q ss_pred EEEEEC
Q 004149 415 IISVNV 420 (771)
Q Consensus 415 l~~~d~ 420 (771)
||.|.+
T Consensus 249 ~~ev~~ 254 (262)
T 3nol_A 249 VFEITL 254 (262)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 887764
No 476
>4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A*
Probab=97.65 E-value=0.00025 Score=76.62 Aligned_cols=112 Identities=18% Similarity=0.122 Sum_probs=75.9
Q ss_pred CCcEEEEEcCCCCCCCC--CcchHHHHHHHHCCcEEEEECCCCCCCCChhhhh---c-----CCCCccccchhhHHHHHH
Q 004149 536 CDPLIVVLHGGPHSVSL--SSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ---S-----LPGKVGSQDVNDVLTAID 605 (771)
Q Consensus 536 ~~p~vv~~HGg~~~~~~--~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~---~-----~~~~~~~~~~~D~~~~i~ 605 (771)
..|++|++-| -+.... ..-........+.|-.+|..++|- ||.+..- . +..-...+.++|+...++
T Consensus 42 ~gPIfl~~gG-Eg~~~~~~~~~g~~~~lA~~~~a~~v~lEHRy---YG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~ 117 (472)
T 4ebb_A 42 EGPIFFYTGN-EGDVWAFANNSAFVAELAAERGALLVFAEHRY---YGKSLPFGAQSTQRGHTELLTVEQALADFAELLR 117 (472)
T ss_dssp TCCEEEEECC-SSCHHHHHHHCHHHHHHHHHHTCEEEEECCTT---STTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHH
T ss_pred CCcEEEEECC-CccccccccCccHHHHHHHHhCCeEEEEeccc---ccCCcCCCCCCccccccccCCHHHHHHHHHHHHH
Confidence 3687777744 222100 000112334456799999999997 6655431 1 111122345789999999
Q ss_pred HHHHcCCCCCCeEEEEEcChhHHHHHHHHHhCCCceeEEEecCCcc
Q 004149 606 HVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 651 (771)
Q Consensus 606 ~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 651 (771)
++.........+++++|.|+||.+|+++-.++|+.+.++++.++++
T Consensus 118 ~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv 163 (472)
T 4ebb_A 118 ALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPV 163 (472)
T ss_dssp HHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred HHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccce
Confidence 9887755556799999999999999999999999999888777643
No 477
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.64 E-value=0.0041 Score=71.61 Aligned_cols=163 Identities=9% Similarity=0.083 Sum_probs=102.3
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCC-----cceEEEecCCcccccccCCCcccceeecCCCCeEEEEecC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS-----QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 173 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~ 173 (771)
.....++|.+.+.+|.++ +.. ...|+.+...+ ....++...... ..++++.+.++.|+++-.
T Consensus 424 ~~~~gl~~d~~~~~lY~s-D~~--~~~I~~~~l~g~~~~~~~~~vi~~~l~~---------P~GLAvD~~~~~LY~tD~- 490 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWS-DLS--QRMICSTQLDRAHGVSSYDTVISRDIQA---------PDGLAVDWIHSNIYWTDS- 490 (791)
T ss_dssp SSEEEEEEETTTTEEEEE-ETT--TTEEEEEEC--------CEEEECSSCSC---------CCEEEEETTTTEEEEEET-
T ss_pred CceEEEeecccCCeeEEe-ecc--ceeEEEEeccCCCCCcceeEEEecCCCC---------cceeeeeecCCcEEEEec-
Confidence 446678899888777554 332 34577666332 223333211111 147888888887766521
Q ss_pred CCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCC
Q 004149 174 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 253 (771)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~ 253 (771)
....|+++++++...+.+. ...-..+..++..|.+..
T Consensus 491 ------------------------------------------~~~~I~v~~ldG~~~~~l~-~~~l~~P~gIaVDp~~g~ 527 (791)
T 3m0c_C 491 ------------------------------------------VLGTVSVADTKGVKRKTLF-RENGSKPRAIVVDPVHGF 527 (791)
T ss_dssp ------------------------------------------TTTEEEEEETTSSSEEEEE-ECTTCCEEEEEEETTTTE
T ss_pred ------------------------------------------CCCeEEEEeCCCCeEEEEE-eCCCCCcceEEEecCCCC
Confidence 2368999999988776662 122234678899998776
Q ss_pred CccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCC-CCccccceeecCCCCEEE
Q 004149 254 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLV 332 (771)
Q Consensus 254 ~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~~~~~~p~~SpDG~~l~ 332 (771)
|+++-|. ....|+++++ ++...+.|.. ........+++++++.||
T Consensus 528 ----LYwtD~g-------------~~~~I~~~~~-----------------dG~~~~~lv~~~l~~P~GLavD~~~~~LY 573 (791)
T 3m0c_C 528 ----MYWTDWG-------------TPAKIKKGGL-----------------NGVDIYSLVTENIQWPNGITLDLLSGRLY 573 (791)
T ss_dssp ----EEEEECS-------------SSCEEEEEET-----------------TSCCEEEEECSSCSCEEEEEEETTTTEEE
T ss_pred ----EEEecCC-------------CCCeEEEEec-----------------CCCceEEEEeCCCCCceEEEEecCCCeEE
Confidence 7766432 1237999998 5555544433 334567789999999999
Q ss_pred EEecCCCCCCCCccccccceeeecCCCCC
Q 004149 333 FLSAKSSVDSGAHSATDSLHRIDWPTNGN 361 (771)
Q Consensus 333 f~~~~~~~~~g~~~~~~~l~~~d~~~~~~ 361 (771)
|+... ...|+++++.+...
T Consensus 574 waD~~----------~~~I~~~d~dG~~~ 592 (791)
T 3m0c_C 574 WVDSK----------LHSISSIDVNGGNR 592 (791)
T ss_dssp EEETT----------TTEEEEEETTSCSC
T ss_pred EEeCC----------CCcEEEEecCCCce
Confidence 98644 25699999876543
No 478
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.64 E-value=0.0044 Score=69.63 Aligned_cols=205 Identities=10% Similarity=0.037 Sum_probs=122.6
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcc--eEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQL--EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 176 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~ 176 (771)
.....+.|++.+.+|.++ +.. ...|+.+...+.. ..++...... ..++++.+.++.|++...
T Consensus 40 ~~~~~ld~~~~~~~ly~s-D~~--~~~I~r~~~~g~~~~~~v~~~~~~~---------P~GlAvD~~~~~ly~~d~---- 103 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWS-DVS--EEAIKRTEFNKTESVQNVVVSGLLS---------PDGLACDWLGEKLYWTDS---- 103 (619)
T ss_dssp SCEEEEEEETTTTEEEEE-ETT--TTEEEEEEC-----CEEEECSSCSC---------EEEEEEETTTTEEEEEET----
T ss_pred CceEEEEEEeCCCEEEEE-ECC--CCeEEEEEccCCCceEEEEeCCCCC---------cCeEEEEecCCEEEEEeC----
Confidence 446678999988888554 432 3457776633322 2222221111 148889998887766521
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004149 177 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
....|.++++++...+.+. ...-..+..++..|.+..
T Consensus 104 ---------------------------------------~~~~I~v~~~dG~~~~~l~-~~~l~~P~~Iavdp~~g~--- 140 (619)
T 3s94_A 104 ---------------------------------------ETNRIEVSNLDGSLRKVLF-WQELDQPRAIALDPSSGF--- 140 (619)
T ss_dssp ---------------------------------------TTTEEEEEETTSCSCEEEE-CSSCSCCCCEEEETTTTE---
T ss_pred ---------------------------------------CCCEEEEEECCCCCEEEEE-eCCCCCCceEEEecCCCe---
Confidence 2368999999887766662 122235778899998776
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecC-CCCccccceeecCCCCEEEEEe
Q 004149 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLS 335 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt-~~~~~~~~p~~SpDG~~l~f~~ 335 (771)
|+|+-|. ....|++.++ ++...+.+. .........++++++++|+|..
T Consensus 141 -ly~tD~g-------------~~~~I~r~~~-----------------dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD 189 (619)
T 3s94_A 141 -MYWTDWG-------------EVPKIERAGM-----------------DGSSRFIIINSEIYWPNGLTLDYEEQKLYWAD 189 (619)
T ss_dssp -EEEEECS-------------SSCEEEEEET-----------------TSCSCEEEECSSCSSEEEEEEETTTTEEEEEE
T ss_pred -EEEeccC-------------CCCEEEEEEC-----------------CCCceEEEEeCCCCCCcEEEEEccCCEEEEEe
Confidence 7776532 1247999998 555444443 3334467789999999999987
Q ss_pred cCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEE
Q 004149 336 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 415 (771)
Q Consensus 336 ~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l 415 (771)
... ..|+++|+++...+.+.... +. .+..+++. +..||++. .....|
T Consensus 190 ~~~----------~~I~~~~~dG~~~~~~~~~~--------------~~-----~P~gi~~~--~~~ly~td--~~~~~V 236 (619)
T 3s94_A 190 AKL----------NFIHKSNLDGTNRQAVVKGS--------------LP-----HPFALTLF--EDILYWTD--WSTHSI 236 (619)
T ss_dssp TTT----------CCEEEESSSCCEEC----------------------------CCCEEES--SSEEEEEC--TTTCSE
T ss_pred CCC----------CeEEEecCCCCccEEEEeCC--------------CC-----CceEEEEe--CCEEEEec--CCCCEE
Confidence 542 56999998765443332110 00 12344443 33676653 234568
Q ss_pred EEEECCCCcEE
Q 004149 416 ISVNVSSGELL 426 (771)
Q Consensus 416 ~~~d~~tg~~~ 426 (771)
+++|..+|+..
T Consensus 237 ~~~d~~tg~~~ 247 (619)
T 3s94_A 237 LACNKYTGEGL 247 (619)
T ss_dssp EEEESSSCCCC
T ss_pred EEEECCCCccc
Confidence 89998877644
No 479
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.61 E-value=0.0032 Score=64.61 Aligned_cols=194 Identities=11% Similarity=-0.030 Sum_probs=98.9
Q ss_pred eEEEEEccCCceeeccCCCC---CCccceEEEec-CCCCCccEEEEEeecCc--ceee-eeeeeccCCceeEEEeccccc
Q 004149 219 SLFVININSGEVQAVKGIPK---SLSVGQVVWAP-LNEGLHQYLVFVGWSSE--TRKL-GIKYCYNRPCALYAVRVSLYK 291 (771)
Q Consensus 219 ~l~v~d~~~~~~~~l~~~~~---~~~~~~~~wsp-Dg~~~~~~l~~~~~~~~--~~~~-g~~~~~~~~~~l~~~d~~~~~ 291 (771)
.|+++|.++++.+.+..... -.....+++.| ||+ |+++..... .+.. ...........|+++|.
T Consensus 102 ~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-----l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~---- 172 (322)
T 2fp8_A 102 HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI-----VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP---- 172 (322)
T ss_dssp EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC-----EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET----
T ss_pred CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE-----EEEECCcccccccccceehcccCCCceEEEEeC----
Confidence 47777877666555421111 12356688999 885 777642210 0000 00000012347999996
Q ss_pred chhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeE
Q 004149 292 SEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDV 371 (771)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 371 (771)
.+++.+.+..........+|+|||+.|++.... ..+|+++++.+.... ....+
T Consensus 173 -------------~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~----------~~~I~~~~~~~~~~~----~~~~~ 225 (322)
T 2fp8_A 173 -------------STKETTLLLKELHVPGGAEVSADSSFVLVAEFL----------SHQIVKYWLEGPKKG----TAEVL 225 (322)
T ss_dssp -------------TTTEEEEEEEEESCCCEEEECTTSSEEEEEEGG----------GTEEEEEESSSTTTT----CEEEE
T ss_pred -------------CCCEEEEeccCCccCcceEECCCCCEEEEEeCC----------CCeEEEEECCCCcCC----ccceE
Confidence 556554443322334568999999988776543 246999998753211 11111
Q ss_pred EecccccCCCCCcccccCCCCCCccccCCCEEEEEeee--------CCeeEEEEEECCCCcEEEecCCCCC-ce-eeEEe
Q 004149 372 IPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW--------GSSQVIISVNVSSGELLRITPAESN-FS-WSLLT 441 (771)
Q Consensus 372 ~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~--------~~~~~l~~~d~~tg~~~~l~~~~~~-~~-~~~~s 441 (771)
.. .+| ...++..++|+ |+++... .....|++++.++..+..+....+. .. ...+.
T Consensus 226 ~~---------~~g-----P~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~ 290 (322)
T 2fp8_A 226 VK---------IPN-----PGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQ 290 (322)
T ss_dssp EE---------CSS-----EEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEE
T ss_pred Ee---------CCC-----CCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEE
Confidence 10 111 22456788887 6655543 2245689999864444455433221 11 11222
Q ss_pred ecCCEEEEEEeCCCCCCeEEEEEec
Q 004149 442 LDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 442 ~d~~~l~~~~s~~~~p~~l~~~~~~ 466 (771)
.+++.|++... ....|.++++.
T Consensus 291 ~~~g~L~v~~~---~~~~i~~~~~~ 312 (322)
T 2fp8_A 291 EHDGLLYIGTL---FHGSVGILVYD 312 (322)
T ss_dssp EETTEEEEECS---SCSEEEEEEC-
T ss_pred EeCCEEEEeec---CCCceEEEecc
Confidence 34566766542 23456666654
No 480
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.58 E-value=0.011 Score=66.52 Aligned_cols=178 Identities=10% Similarity=-0.022 Sum_probs=112.5
Q ss_pred ceEEEEEccCCceeeccCCCCC-CccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhh
Q 004149 218 PSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 296 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~-~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 296 (771)
..|+.++++++..+.+ .... ..+..++..+.++. |+++-. ....|.++++
T Consensus 59 ~~I~r~~~~g~~~~~v--~~~g~~~P~GlAvD~~~~~----LY~tD~--------------~~~~I~v~~~--------- 109 (628)
T 4a0p_A 59 KTISRAFMNGSALEHV--VEFGLDYPEGMAVDWLGKN----LYWADT--------------GTNRIEVSKL--------- 109 (628)
T ss_dssp TEEEEEETTSCSCEEE--ECSSCSCCCEEEEETTTTE----EEEEET--------------TTTEEEEEET---------
T ss_pred CeEEEEECCCCCcEEE--EeCCCCCcceEEEEeCCCE----EEEEEC--------------CCCEEEEEec---------
Confidence 6889999988766665 2222 35677888888887 777642 2347999998
Q ss_pred hhhhcCCCCCCcceecC-CCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecc
Q 004149 297 LELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 375 (771)
Q Consensus 297 ~~~~~~~~~~~~~~~lt-~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 375 (771)
++...+.|. .........++.|....|+|..... ..+|+++++++...+.+...
T Consensus 110 --------dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~---------~~~I~r~~~dG~~~~~l~~~-------- 164 (628)
T 4a0p_A 110 --------DGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGG---------KPKIDRAAMDGSERTTLVPN-------- 164 (628)
T ss_dssp --------TSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSS---------SCEEEEEETTSCSCEEEECS--------
T ss_pred --------CCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCC---------CCEEEEEeCCCCceEEEECC--------
Confidence 555544443 3344567889999888888876432 35799999876554222110
Q ss_pred cccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEEEeCCC
Q 004149 376 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPV 455 (771)
Q Consensus 376 ~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~~s~~~ 455 (771)
.. .+..+++.+++++||++.. ....|++++++++..+.+..... .-..++.+++.||++..
T Consensus 165 -----~~-------~P~GlalD~~~~~LY~aD~--~~~~I~~~d~dG~~~~v~~~~l~--~P~glav~~~~ly~tD~--- 225 (628)
T 4a0p_A 165 -----VG-------RANGLTIDYAKRRLYWTDL--DTNLIESSNMLGLNREVIADDLP--HPFGLTQYQDYIYWTDW--- 225 (628)
T ss_dssp -----CS-------SEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEEECCS--CEEEEEEETTEEEEEET---
T ss_pred -----CC-------CcceEEEccccCEEEEEEC--CCCEEEEEcCCCCceEEeeccCC--CceEEEEECCEEEEecC---
Confidence 01 1345678888888988754 44578899997766654432221 22355666778877763
Q ss_pred CCCeEEEEEeccc
Q 004149 456 DVPQVKYGYFVDK 468 (771)
Q Consensus 456 ~p~~l~~~~~~~~ 468 (771)
....|++++..++
T Consensus 226 ~~~~I~~~dk~tg 238 (628)
T 4a0p_A 226 SRRSIERANKTSG 238 (628)
T ss_dssp TTTEEEEEETTTC
T ss_pred CCCEEEEEECCCC
Confidence 3346777775444
No 481
>1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5
Probab=97.57 E-value=0.00037 Score=74.44 Aligned_cols=123 Identities=20% Similarity=0.232 Sum_probs=76.0
Q ss_pred CceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHH---------------------HCCcEEEEECC-C
Q 004149 518 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLS---------------------SVGYSLLIVNY-R 575 (771)
Q Consensus 518 g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la---------------------~~G~~V~~~d~-r 575 (771)
+..+..|++.... .....|+|+++||||++... + ..|. ..-+.++.+|. +
T Consensus 31 ~~~lfy~f~~s~~--~~~~~Pl~lwlnGGPG~Ss~--~----g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiDqP~ 102 (452)
T 1ivy_A 31 SKHLHYWFVESQK--DPENSPVVLWLNGGPGCSSL--D----GLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPA 102 (452)
T ss_dssp TEEEEEEEECCSS--CGGGSCEEEEECCTTTBCTH--H----HHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCST
T ss_pred CCeEEEEEEEcCC--CCCCCCEEEEECCCCcHHHH--H----HHHHhcCCcEEeCCCceeeeCCCcccccccEEEEecCC
Confidence 4668877776432 23467999999999987431 1 1111 13478999996 5
Q ss_pred CCCCCChhhhhcCCCCccc---cchhhHHHHHH-HHHHcCCCCCCeEEEEEcChhHHHHHHHHHh----CCCceeEEEec
Q 004149 576 GSLGFGEEALQSLPGKVGS---QDVNDVLTAID-HVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ----APDKFVAAAAR 647 (771)
Q Consensus 576 G~~~~g~~~~~~~~~~~~~---~~~~D~~~~i~-~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~----~p~~~~a~v~~ 647 (771)
|.| +... . ...... ...+|+..++. ++...+.....++.|+|+|+||..+..+|.. .+-.++++++.
T Consensus 103 GtG-fS~~--~--~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ig 177 (452)
T 1ivy_A 103 GVG-FSYS--D--DKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVG 177 (452)
T ss_dssp TST-TCEE--S--SCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEE
T ss_pred CCC-cCCc--C--CCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEec
Confidence 643 3221 1 111111 12444444443 4444444556889999999999966665542 34568999999
Q ss_pred CCccch
Q 004149 648 NPLCNL 653 (771)
Q Consensus 648 ~p~~~~ 653 (771)
+|+++.
T Consensus 178 n~~~d~ 183 (452)
T 1ivy_A 178 NGLSSY 183 (452)
T ss_dssp SCCSBH
T ss_pred CCccCh
Confidence 998874
No 482
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.56 E-value=0.0067 Score=62.40 Aligned_cols=156 Identities=9% Similarity=0.023 Sum_probs=84.8
Q ss_pred CceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhh
Q 004149 217 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 296 (771)
Q Consensus 217 ~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 296 (771)
...|+++|.++|++....+...-..+..++++|||+ |+++.. ....|++++.
T Consensus 68 ~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~-----l~v~d~--------------~~~~v~~~~~--------- 119 (329)
T 3fvz_A 68 EDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN-----YWVTDV--------------ALHQVFKLDP--------- 119 (329)
T ss_dssp SCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC-----EEEEET--------------TTTEEEEECT---------
T ss_pred CCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC-----EEEEEC--------------CCCEEEEEeC---------
Confidence 468999999988876552212223567889999997 555531 2347888886
Q ss_pred hhhhcCCCCCC--cceecC---------CCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCc
Q 004149 297 LELKESSSEDL--PVVNLT---------ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSL 365 (771)
Q Consensus 297 ~~~~~~~~~~~--~~~~lt---------~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~ 365 (771)
++. ....+. .........+++|++..|++..... ...|++++.. +......
T Consensus 120 --------~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~---------~~~I~~~~~~-g~~~~~~ 181 (329)
T 3fvz_A 120 --------HSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC---------NSRIVQFSPS-GKFVTQW 181 (329)
T ss_dssp --------TCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS---------CCEEEEECTT-SCEEEEE
T ss_pred --------CCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC---------CCeEEEEcCC-CCEEEEe
Confidence 333 233332 1122466789999444465555311 2468888843 3321110
Q ss_pred cceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEec
Q 004149 366 EKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 429 (771)
Q Consensus 366 ~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~ 429 (771)
..... -.......| ..+..++++||+..||++... ...|.+++.++|+.....
T Consensus 182 ~~~g~----~~~~~~~~~-----~~p~gia~d~~~g~l~v~d~~--~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 182 GEESS----GSSPRPGQF-----SVPHSLALVPHLDQLCVADRE--NGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp CEECC----SSSCCTTEE-----SCEEEEEEETTTTEEEEEETT--TTEEEEEETTTCCEEEEE
T ss_pred ccCCC----CCCCCCccc-----CCCcEEEEECCCCEEEEEECC--CCEEEEEECCCCcEEEEE
Confidence 00000 000000011 123467889996667776543 346777788877765443
No 483
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.55 E-value=0.014 Score=58.51 Aligned_cols=274 Identities=9% Similarity=-0.009 Sum_probs=131.5
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
......+++|+|+.. +... ....++.++..+..... ...... ....++.++|||+ |++...... .-
T Consensus 15 ~~~~~i~~d~~g~l~-v~~~---~~~~v~~~d~~~~~~~~-~~~~~~-------~~~~~i~~~~~g~-l~v~~~~~~-~i 80 (299)
T 2z2n_A 15 TGPYGITVSDKGKVW-ITQH---KANMISCINLDGKITEY-PLPTPD-------AKVMCLTISSDGE-VWFTENAAN-KI 80 (299)
T ss_dssp CCEEEEEECTTSCEE-EEET---TTTEEEEECTTCCEEEE-ECSSTT-------CCEEEEEECTTSC-EEEEETTTT-EE
T ss_pred CCccceEECCCCCEE-EEec---CCCcEEEEcCCCCeEEe-cCCccc-------CceeeEEECCCCC-EEEeCCCCC-eE
Confidence 346778899999733 3322 12346666633443322 221110 1124788889886 444332111 00
Q ss_pred CCccCCCCCCC-CCCccCCCCCCcccccCCcCcccCCc-cCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCcc
Q 004149 179 PTFSLGSTKGG-SSDKDCNSWKGQGDWEEDWGETYAGK-RQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 256 (771)
Q Consensus 179 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~g~~~~~~-~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~ 256 (771)
..++.. .... ..............+.++ |..++.. ....|+++|. +++...+........+..++++|||+
T Consensus 81 ~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~---- 153 (299)
T 2z2n_A 81 GRITKK-GIIKEYTLPNPDSAPYGITEGPN-GDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNA---- 153 (299)
T ss_dssp EEECTT-SCEEEEECSSTTCCEEEEEECTT-SCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSC----
T ss_pred EEECCC-CcEEEEeCCCcCCCceeeEECCC-CCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCC----
Confidence 001100 0000 000000111122334444 3444432 3467888888 55555442111223567788999985
Q ss_pred EEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCccee--cCCCCccccceeecCCCCEEEEE
Q 004149 257 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVN--LTESISSAFFPRFSPDGKFLVFL 334 (771)
Q Consensus 257 ~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--lt~~~~~~~~p~~SpDG~~l~f~ 334 (771)
|++... ....|+++|. +++... +...........+++||+ |++.
T Consensus 154 -l~v~~~--------------~~~~i~~~~~------------------~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~ 199 (299)
T 2z2n_A 154 -LWFTEN--------------QNNAIGRITE------------------SGDITEFKIPTPASGPVGITKGNDDA-LWFV 199 (299)
T ss_dssp -EEEEET--------------TTTEEEEECT------------------TCCEEEEECSSTTCCEEEEEECTTSS-EEEE
T ss_pred -EEEEeC--------------CCCEEEEEcC------------------CCcEEEeeCCCCCCcceeEEECCCCC-EEEE
Confidence 666541 2236888885 233332 222233456788999988 5444
Q ss_pred ecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeE
Q 004149 335 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 414 (771)
Q Consensus 335 ~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 414 (771)
... ...|+++|. ++....+ ...... ..+..++++++|+ |++... ....
T Consensus 200 ~~~----------~~~i~~~~~-~g~~~~~-----------~~~~~~-------~~~~~i~~~~~g~-l~v~~~--~~~~ 247 (299)
T 2z2n_A 200 EII----------GNKIGRITT-SGEITEF-----------KIPTPN-------ARPHAITAGAGID-LWFTEW--GANK 247 (299)
T ss_dssp ETT----------TTEEEEECT-TCCEEEE-----------ECSSTT-------CCEEEEEECSTTC-EEEEET--TTTE
T ss_pred ccC----------CceEEEECC-CCcEEEE-----------ECCCCC-------CCceeEEECCCCC-EEEecc--CCce
Confidence 322 245888887 4432111 000000 1233567788887 665542 2346
Q ss_pred EEEEECCCCcEEEecCCC--CCceeeEEeecCCEEEEEEeCCCCCCeEEEEEec
Q 004149 415 IISVNVSSGELLRITPAE--SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 415 l~~~d~~tg~~~~l~~~~--~~~~~~~~s~d~~~l~~~~s~~~~p~~l~~~~~~ 466 (771)
|++++. ++++..+.... .......+ ++ +.+++..+ ...+++++..
T Consensus 248 i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~-g~l~v~~~----~~~l~~~~~~ 294 (299)
T 2z2n_A 248 IGRLTS-NNIIEEYPIQIKSAEPHGICF-DG-ETIWFAME----CDKIGKLTLI 294 (299)
T ss_dssp EEEEET-TTEEEEEECSSSSCCEEEEEE-CS-SCEEEEET----TTEEEEEEEC
T ss_pred EEEECC-CCceEEEeCCCCCCccceEEe-cC-CCEEEEec----CCcEEEEEcC
Confidence 888898 57766664222 22222344 44 44555442 2456666654
No 484
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.55 E-value=0.005 Score=59.29 Aligned_cols=178 Identities=13% Similarity=0.196 Sum_probs=103.2
Q ss_pred CceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhh
Q 004149 217 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 296 (771)
Q Consensus 217 ~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 296 (771)
...|.++|+++|++..-...+. .......++++++ |+...|. ...++++|.
T Consensus 42 ~S~v~~vD~~tgkv~~~~~l~~--~~fgeGi~~~~~~----ly~ltw~--------------~~~v~v~D~--------- 92 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRAEVPP--PYFGAGIVAWRDR----LIQLTWR--------------NHEGFVYDL--------- 92 (243)
T ss_dssp SCEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTE----EEEEESS--------------SSEEEEEET---------
T ss_pred CceEEEEECCCCCEEEEEeCCC--CcceeEEEEeCCE----EEEEEee--------------CCEEEEEEC---------
Confidence 4789999999998866521232 2333445667777 7777653 337999997
Q ss_pred hhhhcCCCCCCcc-eecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecc
Q 004149 297 LELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 375 (771)
Q Consensus 297 ~~~~~~~~~~~~~-~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 375 (771)
++.+. .++.... ....+++||+.|+. ++. ..+|+++|.++.+... .+++.
T Consensus 93 --------~tl~~~~ti~~~~---~Gwglt~dg~~L~v-Sdg----------s~~l~~iDp~t~~~~~-------~I~V~ 143 (243)
T 3mbr_X 93 --------ATLTPRARFRYPG---EGWALTSDDSHLYM-SDG----------TAVIRKLDPDTLQQVG-------SIKVT 143 (243)
T ss_dssp --------TTTEEEEEEECSS---CCCEEEECSSCEEE-ECS----------SSEEEEECTTTCCEEE-------EEECE
T ss_pred --------CcCcEEEEEeCCC---CceEEeeCCCEEEE-ECC----------CCeEEEEeCCCCeEEE-------EEEEc
Confidence 55443 3333221 23456789987654 433 2569999987755311 11111
Q ss_pred cccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC-------------C-CCceeeEEe
Q 004149 376 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA-------------E-SNFSWSLLT 441 (771)
Q Consensus 376 ~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~-------------~-~~~~~~~~s 441 (771)
. ..++ ...+..+.|. ||+ |+ ...+. ...|.+||+++|++.....- . ......+++
T Consensus 144 ~----~g~~---~~~lNeLe~~-~G~-ly-anvw~-s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d 212 (243)
T 3mbr_X 144 A----GGRP---LDNLNELEWV-NGE-LL-ANVWL-TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFD 212 (243)
T ss_dssp E----TTEE---CCCEEEEEEE-TTE-EE-EEETT-TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEE
T ss_pred c----CCcc---cccceeeEEe-CCE-EE-EEECC-CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEc
Confidence 0 1111 0012233454 664 65 43433 34899999999998754321 1 123456888
Q ss_pred ecCCEEEEEEeCCCCCCeEEEEEec
Q 004149 442 LDGDNIIAVSSSPVDVPQVKYGYFV 466 (771)
Q Consensus 442 ~d~~~l~~~~s~~~~p~~l~~~~~~ 466 (771)
++++.|+.+.-.. +.+|.+.+.
T Consensus 213 ~~~~~lfVTGK~w---p~~~~v~~~ 234 (243)
T 3mbr_X 213 AEHDRLFVTGKRW---PMLYEIRLT 234 (243)
T ss_dssp TTTTEEEEEETTC---SEEEEEEEC
T ss_pred CCCCEEEEECCCC---CcEEEEEEe
Confidence 8888888877655 557766654
No 485
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.52 E-value=0.012 Score=57.47 Aligned_cols=210 Identities=12% Similarity=0.142 Sum_probs=117.5
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 178 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~ 178 (771)
...+..+|.|++++|+.+.+. ...++.++..++..+.+.+... ..+.++++.++|+ ++.+.+.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~---~~~I~~ld~~g~v~~~i~l~g~--------~D~EGIa~~~~g~-~~vs~E~----- 89 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINK---PAAIVEMTTNGDLIRTIPLDFV--------KDLETIEYIGDNQ-FVISDER----- 89 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEET---TEEEEEEETTCCEEEEEECSSC--------SSEEEEEECSTTE-EEEEETT-----
T ss_pred cCcceeEEeCCCCEEEEEECC---CCeEEEEeCCCCEEEEEecCCC--------CChHHeEEeCCCE-EEEEECC-----
Confidence 457889999999988777664 4679999955666665554321 1126889998885 4333332
Q ss_pred CCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce----eecc----CCCCCCccceEEEecC
Q 004149 179 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV----QAVK----GIPKSLSVGQVVWAPL 250 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~----~~l~----~~~~~~~~~~~~wspD 250 (771)
...|+++++..... .... ..+.+.....++|+|+
T Consensus 90 --------------------------------------~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~ 131 (255)
T 3qqz_A 90 --------------------------------------DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQ 131 (255)
T ss_dssp --------------------------------------TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETT
T ss_pred --------------------------------------CCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCC
Confidence 24566666543321 1111 1234556789999999
Q ss_pred CCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceec-------CCCCcccccee
Q 004149 251 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL-------TESISSAFFPR 323 (771)
Q Consensus 251 g~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l-------t~~~~~~~~p~ 323 (771)
+++ |+.+. +..+ ..||.++- .+ .+...+.+ ........+.+
T Consensus 132 ~~~----L~va~-E~~p------------~~i~~~~g--~~-------------~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 132 DHT----FWFFK-EKNP------------IEVYKVNG--LL-------------SSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTE----EEEEE-ESSS------------EEEEEEES--TT-------------CSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCE----EEEEE-CcCC------------ceEEEEcc--cc-------------cCCceeeecchhhccccccCCceeEE
Confidence 987 77654 3222 25677661 00 11111111 01122356788
Q ss_pred ecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccc--cCCCCCcccccCCCCCCccccCCC
Q 004149 324 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQC--AEGDCFPGLYSSSILSNPWLSDGC 401 (771)
Q Consensus 324 ~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~f~g~~~~~~~~~~~s~dg~ 401 (771)
+.|.-..|+.++... ..|..+|.++. .+. ...+... .....++ ....+++.++|+
T Consensus 180 ~dp~tg~lliLS~~s----------~~L~~~d~~g~-~~~-------~~~L~~g~~~l~~~~~-----qpEGia~d~~G~ 236 (255)
T 3qqz_A 180 FNQQKNTLLVLSHES----------RALQEVTLVGE-VIG-------EMSLTKGSRGLSHNIK-----QAEGVAMDASGN 236 (255)
T ss_dssp EETTTTEEEEEETTT----------TEEEEECTTCC-EEE-------EEECSTTGGGCSSCCC-----SEEEEEECTTCC
T ss_pred EcCCCCeEEEEECCC----------CeEEEEcCCCC-EEE-------EEEcCCccCCcccccC-----CCCeeEECCCCC
Confidence 899888888888764 46888886653 210 1111100 0001122 234678999996
Q ss_pred EEEEEeeeCCeeEEEEEECCC
Q 004149 402 TMLLSSIWGSSQVIISVNVSS 422 (771)
Q Consensus 402 ~l~~~~~~~~~~~l~~~d~~t 422 (771)
||+++. . ..+|++...+
T Consensus 237 -lyIvsE-~--n~~y~f~~~~ 253 (255)
T 3qqz_A 237 -IYIVSE-P--NRFYRFTPQS 253 (255)
T ss_dssp -EEEEET-T--TEEEEEEC--
T ss_pred -EEEEcC-C--ceEEEEEecC
Confidence 766643 2 2677776543
No 486
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.52 E-value=0.022 Score=55.52 Aligned_cols=201 Identities=11% Similarity=0.153 Sum_probs=111.3
Q ss_pred ccceeecCCCCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeecc
Q 004149 155 FEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK 234 (771)
Q Consensus 155 ~~~~~wSpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~ 234 (771)
+++++|.||++.|+.+.+. .+.|+.+|+++...+.+.
T Consensus 29 lSGla~~~~~~~L~aV~d~-------------------------------------------~~~I~~ld~~g~v~~~i~ 65 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFSTINK-------------------------------------------PAAIVEMTTNGDLIRTIP 65 (255)
T ss_dssp EEEEEEETTTTEEEEEEET-------------------------------------------TEEEEEEETTCCEEEEEE
T ss_pred cceeEEeCCCCEEEEEECC-------------------------------------------CCeEEEEeCCCCEEEEEe
Confidence 3799999999888777553 278999999844344442
Q ss_pred CCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc---cee
Q 004149 235 GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP---VVN 311 (771)
Q Consensus 235 ~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~---~~~ 311 (771)
..+......+++.++|. ++.+. + +...|++++++. .+. ...
T Consensus 66 -l~g~~D~EGIa~~~~g~-----~~vs~-E-------------~~~~l~~~~v~~----------------~~~i~~~~~ 109 (255)
T 3qqz_A 66 -LDFVKDLETIEYIGDNQ-----FVISD-E-------------RDYAIYVISLTP----------------NSEVKILKK 109 (255)
T ss_dssp -CSSCSSEEEEEECSTTE-----EEEEE-T-------------TTTEEEEEEECT----------------TCCEEEEEE
T ss_pred -cCCCCChHHeEEeCCCE-----EEEEE-C-------------CCCcEEEEEcCC----------------CCeeeeeee
Confidence 23334566778877664 43332 2 223677766531 111 011
Q ss_pred ----c--CCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeec-CCCCCCCCccceeeEEec--ccccCCCC
Q 004149 312 ----L--TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW-PTNGNFSSLEKIVDVIPV--VQCAEGDC 382 (771)
Q Consensus 312 ----l--t~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~-~~~~~~~~~~~~~~~~~~--~~~~~~~~ 382 (771)
+ ...+......+|+|++++|+....+. ...||.++- ..+. .+ .+... +....
T Consensus 110 ~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~---------p~~i~~~~g~~~~~--~l-----~i~~~~~~~~~~--- 170 (255)
T 3qqz_A 110 IKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN---------PIEVYKVNGLLSSN--EL-----HISKDKALQRQF--- 170 (255)
T ss_dssp EECCCSSCCCSSCCEEEEEETTTTEEEEEEESS---------SEEEEEEESTTCSS--CC-----EEEECHHHHHTC---
T ss_pred eccccccccccCCcceEEEeCCCCEEEEEECcC---------CceEEEEcccccCC--ce-----eeecchhhcccc---
Confidence 1 12234468899999999887766543 246888871 0111 01 01100 00000
Q ss_pred CcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCC---------CceeeEEeecCCEEEEEEeC
Q 004149 383 FPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES---------NFSWSLLTLDGDNIIAVSSS 453 (771)
Q Consensus 383 f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~---------~~~~~~~s~d~~~l~~~~s~ 453 (771)
....+..+++.|...+|++.+. ....|..+|.++.-+..+.-..+ ......++++|+ ||.+ +-
T Consensus 171 ----~~~d~S~l~~dp~tg~lliLS~--~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIv-sE 242 (255)
T 3qqz_A 171 ----TLDDVSGAEFNQQKNTLLVLSH--ESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIV-SE 242 (255)
T ss_dssp ----CSSCCCEEEEETTTTEEEEEET--TTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEE-ET
T ss_pred ----ccCCceeEEEcCCCCeEEEEEC--CCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEE-cC
Confidence 0113456778787777877764 33568888986543333332221 234467888886 5555 43
Q ss_pred CCCCCeEEEEE
Q 004149 454 PVDVPQVKYGY 464 (771)
Q Consensus 454 ~~~p~~l~~~~ 464 (771)
++ .+|++.
T Consensus 243 ~n---~~y~f~ 250 (255)
T 3qqz_A 243 PN---RFYRFT 250 (255)
T ss_dssp TT---EEEEEE
T ss_pred Cc---eEEEEE
Confidence 33 667664
No 487
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.47 E-value=0.036 Score=55.46 Aligned_cols=171 Identities=12% Similarity=0.050 Sum_probs=93.7
Q ss_pred ceEEEEEccCCceeeccCCC-CCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhh
Q 004149 218 PSLFVININSGEVQAVKGIP-KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 296 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~-~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 296 (771)
..|+++|.+ ++.+.+. .+ ....+..+++.++|+ |++... ....|+.++.
T Consensus 83 ~~v~~~d~~-g~~~~~~-~~~~~~~~~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~--------- 132 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYP-LPQPDSGPYGITEGLNGD-----IWFTQL--------------NGDRIGKLTA--------- 132 (300)
T ss_dssp TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECSTTC-----EEEEET--------------TTTEEEEECT---------
T ss_pred CeEEEECCC-CCeEEec-CCCCCCCCccceECCCCC-----EEEEcc--------------CCCeEEEECC---------
Confidence 568888877 5555442 22 224566788888886 665541 2337888886
Q ss_pred hhhhcCCCCCCcceec--CCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEec
Q 004149 297 LELKESSSEDLPVVNL--TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 374 (771)
Q Consensus 297 ~~~~~~~~~~~~~~~l--t~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 374 (771)
+ ++...+ ...........++++|+ |++.... ...|+++|. +++...+
T Consensus 133 --------~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~----------~~~i~~~~~-~g~~~~~---------- 181 (300)
T 2qc5_A 133 --------D-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQ----------NNSIGRITN-TGKLEEY---------- 181 (300)
T ss_dssp --------T-SCEEEEECSSTTCCEEEEEECTTSS-EEEEETT----------TTEEEEECT-TCCEEEE----------
T ss_pred --------C-CCEEEccCCCCCCCceeEEECCCCC-EEEEecC----------CCeEEEECC-CCcEEEe----------
Confidence 4 443332 22334567788999998 5554432 235888887 3332111
Q ss_pred ccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCC--CCCceeeEEeecCCEEEEEEe
Q 004149 375 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA--ESNFSWSLLTLDGDNIIAVSS 452 (771)
Q Consensus 375 ~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~--~~~~~~~~~s~d~~~l~~~~s 452 (771)
..+.... .+..+++.++|+ |+++.. ....|++++. +++...+... ........++++|+ |+++..
T Consensus 182 -~~~~~~~-------~~~~i~~d~~g~-l~v~~~--~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~ 248 (300)
T 2qc5_A 182 -PLPTNAA-------APVGITSGNDGA-LWFVEI--MGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSE-IWFTEW 248 (300)
T ss_dssp -ECSSTTC-------CEEEEEECTTSS-EEEEET--TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTC-EEEEET
T ss_pred -eCCCCCC-------CcceEEECCCCC-EEEEcc--CCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCC-EEEecc
Confidence 0000001 123556778885 665543 2346888888 6776665322 12233345666665 554442
Q ss_pred CCCCCCeEEEEEe
Q 004149 453 SPVDVPQVKYGYF 465 (771)
Q Consensus 453 ~~~~p~~l~~~~~ 465 (771)
. ...|++++.
T Consensus 249 ~---~~~i~~~~~ 258 (300)
T 2qc5_A 249 G---ANQIGRITN 258 (300)
T ss_dssp T---TTEEEEECT
T ss_pred C---CCeEEEECC
Confidence 2 345666654
No 488
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.47 E-value=0.0037 Score=62.72 Aligned_cols=94 Identities=9% Similarity=0.036 Sum_probs=54.7
Q ss_pred ceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhh
Q 004149 218 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 297 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 297 (771)
..|+++|.++.....+........+..++++|||+ |+++.. ....|++++.
T Consensus 142 ~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~---------- 192 (286)
T 1q7f_A 142 MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE-----IFISDN--------------RAHCVKVFNY---------- 192 (286)
T ss_dssp TEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE-----EEEEEG--------------GGTEEEEEET----------
T ss_pred CEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCC-----EEEEEC--------------CCCEEEEEcC----------
Confidence 57888887655444442111223467889999986 554431 2237888886
Q ss_pred hhhcCCCCCCcceecCCC--CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecC
Q 004149 298 ELKESSSEDLPVVNLTES--ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 357 (771)
Q Consensus 298 ~~~~~~~~~~~~~~lt~~--~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~ 357 (771)
++.....+... .......+++|||+ |+...... ...|.++|..
T Consensus 193 -------~g~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~---------~~~i~~~~~~ 237 (286)
T 1q7f_A 193 -------EGQYLRQIGGEGITNYPIGVGINSNGE-ILIADNHN---------NFNLTIFTQD 237 (286)
T ss_dssp -------TCCEEEEESCTTTSCSEEEEEECTTCC-EEEEECSS---------SCEEEEECTT
T ss_pred -------CCCEEEEEccCCccCCCcEEEECCCCC-EEEEeCCC---------CEEEEEECCC
Confidence 44444444332 23466789999996 44433221 1268888854
No 489
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.40 E-value=0.0029 Score=61.48 Aligned_cols=175 Identities=13% Similarity=0.027 Sum_probs=100.3
Q ss_pred ceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhh
Q 004149 218 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 297 (771)
Q Consensus 218 ~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 297 (771)
..|.++|+++|++..-. .+. .......+++|++ |+...|.. ..++++|.
T Consensus 75 g~v~~iD~~Tgkv~~~~-l~~--~~FgeGit~~g~~----Ly~ltw~~--------------~~v~V~D~---------- 123 (268)
T 3nok_A 75 GTLRQLSLESAQPVWME-RLG--NIFAEGLASDGER----LYQLTWTE--------------GLLFTWSG---------- 123 (268)
T ss_dssp TEEEECCSSCSSCSEEE-ECT--TCCEEEEEECSSC----EEEEESSS--------------CEEEEEET----------
T ss_pred CEEEEEECCCCcEEeEE-CCC--CcceeEEEEeCCE----EEEEEccC--------------CEEEEEEC----------
Confidence 34999999999875542 232 2223345778888 88877533 37999997
Q ss_pred hhhcCCCCCCcc-eecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEeccc
Q 004149 298 ELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 376 (771)
Q Consensus 298 ~~~~~~~~~~~~-~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 376 (771)
++.+. .++... . ....+++||+.|+. ++. ..+|+++|.++.+... .+.+..
T Consensus 124 -------~Tl~~~~ti~~~-~--eGwGLt~Dg~~L~v-SdG----------s~~l~~iDp~T~~v~~-------~I~V~~ 175 (268)
T 3nok_A 124 -------MPPQRERTTRYS-G--EGWGLCYWNGKLVR-SDG----------GTMLTFHEPDGFALVG-------AVQVKL 175 (268)
T ss_dssp -------TTTEEEEEEECS-S--CCCCEEEETTEEEE-ECS----------SSEEEEECTTTCCEEE-------EEECEE
T ss_pred -------CcCcEEEEEeCC-C--ceeEEecCCCEEEE-ECC----------CCEEEEEcCCCCeEEE-------EEEeCC
Confidence 55443 333322 1 23456689997754 432 2579999987755311 111111
Q ss_pred ccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCC--------------CCceeeEEee
Q 004149 377 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE--------------SNFSWSLLTL 442 (771)
Q Consensus 377 ~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~--------------~~~~~~~~s~ 442 (771)
. .++ ...+..+.|. || +|++. .+. ...|.+||+++|++.....-. ......++++
T Consensus 176 ~----g~~---v~~lNeLe~~-dG-~lyan-vw~-s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp 244 (268)
T 3nok_A 176 R----GQP---VELINELECA-NG-VIYAN-IWH-SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEP 244 (268)
T ss_dssp T----TEE---CCCEEEEEEE-TT-EEEEE-ETT-CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECT
T ss_pred C----Ccc---cccccccEEe-CC-EEEEE-ECC-CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcC
Confidence 1 000 0012234566 77 46543 333 348999999999977543211 1234467888
Q ss_pred cCCEEEEEEeCCCCCCeEEEEEe
Q 004149 443 DGDNIIAVSSSPVDVPQVKYGYF 465 (771)
Q Consensus 443 d~~~l~~~~s~~~~p~~l~~~~~ 465 (771)
+++.|+.+.-.. +.+|.+.+
T Consensus 245 ~~~rlfVTGK~W---p~~~ev~~ 264 (268)
T 3nok_A 245 GSGRIFMTGKLW---PRLFEVRL 264 (268)
T ss_dssp TTCCEEEEETTC---SEEEEEEE
T ss_pred CCCEEEEeCCCC---CceEEEEE
Confidence 888877766544 44555443
No 490
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.38 E-value=0.016 Score=58.72 Aligned_cols=161 Identities=12% Similarity=0.189 Sum_probs=93.4
Q ss_pred cceEEEeCCCCCeEEEEecCC------------CCCCeEEEEecCCcceEEEecCCcccccccCCCcccceeec----CC
Q 004149 100 GASAVVPSPSGSKLLVVRNPE------------NESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWN----SD 163 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wS----pD 163 (771)
.....+++|+|+.. +..... .....++.++..++...+....... .++.|+ ||
T Consensus 118 ~~~~i~~d~~g~l~-v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~----------~~i~~~~~~d~d 186 (314)
T 1pjx_A 118 GCNDCAFDYEGNLW-ITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQFP----------NGIAVRHMNDGR 186 (314)
T ss_dssp CCCEEEECTTSCEE-EEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEEESSE----------EEEEEEECTTSC
T ss_pred CCcCEEECCCCCEE-EEecCcccccccccccccCCCCeEEEECCCCCEEEeccCCCCc----------ceEEEecccCCC
Confidence 36678999999643 433211 0124577776335444433221112 478899 99
Q ss_pred CCeEEEEecCCCCCCCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEcc-CCcee---eccCCCCC
Q 004149 164 ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGEVQ---AVKGIPKS 239 (771)
Q Consensus 164 g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~-~~~~~---~l~~~~~~ 239 (771)
|+.|++... ....|+++|++ +++.. .+...+..
T Consensus 187 g~~l~v~~~-------------------------------------------~~~~i~~~~~~~~g~~~~~~~~~~~~~~ 223 (314)
T 1pjx_A 187 PYQLIVAET-------------------------------------------PTKKLWSYDIKGPAKIENKKVWGHIPGT 223 (314)
T ss_dssp EEEEEEEET-------------------------------------------TTTEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred CCEEEEEEC-------------------------------------------CCCeEEEEECCCCCccccceEEEECCCC
Confidence 987665422 12578888876 44421 11102222
Q ss_pred --CccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCc-ceecCCCC
Q 004149 240 --LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESI 316 (771)
Q Consensus 240 --~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~lt~~~ 316 (771)
..+..+++++||+ |++... ....|+++|. ++++ ...+....
T Consensus 224 ~~~~p~~i~~d~~G~-----l~v~~~--------------~~~~i~~~d~-----------------~~g~~~~~~~~~~ 267 (314)
T 1pjx_A 224 HEGGADGMDFDEDNN-----LLVANW--------------GSSHIEVFGP-----------------DGGQPKMRIRCPF 267 (314)
T ss_dssp SSCEEEEEEEBTTCC-----EEEEEE--------------TTTEEEEECT-----------------TCBSCSEEEECSS
T ss_pred CCCCCCceEECCCCC-----EEEEEc--------------CCCEEEEEcC-----------------CCCcEeEEEeCCC
Confidence 3466789999985 665542 2237888987 5333 33333333
Q ss_pred ccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCC
Q 004149 317 SSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 360 (771)
Q Consensus 317 ~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~ 360 (771)
.......|+|||+.|++..... ..|+++++...+
T Consensus 268 ~~~~~i~~~~dg~~l~v~~~~~----------~~l~~~~~~~~g 301 (314)
T 1pjx_A 268 EKPSNLHFKPQTKTIFVTEHEN----------NAVWKFEWQRNG 301 (314)
T ss_dssp SCEEEEEECTTSSEEEEEETTT----------TEEEEEECSSCB
T ss_pred CCceeEEECCCCCEEEEEeCCC----------CeEEEEeCCCCC
Confidence 4577889999999877665442 358888876543
No 491
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.35 E-value=0.0043 Score=62.06 Aligned_cols=185 Identities=13% Similarity=0.102 Sum_probs=98.8
Q ss_pred CCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccc
Q 004149 213 AGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKS 292 (771)
Q Consensus 213 ~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 292 (771)
++.....|+++|.++|+...-...........+.++|||+ |++.. . ..|+.+|.
T Consensus 10 ~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~-----ilvs~-~---------------~~V~~~d~----- 63 (276)
T 3no2_A 10 GGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGE-----ILFSY-S---------------KGAKMITR----- 63 (276)
T ss_dssp ECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSC-----EEEEC-B---------------SEEEEECT-----
T ss_pred eeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCC-----EEEeC-C---------------CCEEEECC-----
Confidence 3446689999999888865542122213567889999998 55432 1 14666664
Q ss_pred hhhhhhhhcCCCCCCcceecCCC-CccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCC-CCCccceee
Q 004149 293 EASELELKESSSEDLPVVNLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN-FSSLEKIVD 370 (771)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~lt~~-~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~-~~~~~~~~~ 370 (771)
++....++... .....++.++|||+.|+-.... ...|+.+|.+ |+. ..+
T Consensus 64 ------------~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~----------~~~v~~vd~~-Gk~l~~~------ 114 (276)
T 3no2_A 64 ------------DGRELWNIAAPAGCEMQTARILPDGNALVAWCGH----------PSTILEVNMK-GEVLSKT------ 114 (276)
T ss_dssp ------------TSCEEEEEECCTTCEEEEEEECTTSCEEEEEEST----------TEEEEEECTT-SCEEEEE------
T ss_pred ------------CCCEEEEEcCCCCccccccEECCCCCEEEEecCC----------CCEEEEEeCC-CCEEEEE------
Confidence 33333333332 2345678899999987654431 1346666643 221 110
Q ss_pred EEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEECCCCcEEEecCCCCCceeeEEeecCCEEEEE
Q 004149 371 VIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAV 450 (771)
Q Consensus 371 ~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~~tg~~~~l~~~~~~~~~~~~s~d~~~l~~~ 450 (771)
.+ .. ..++-+ ......+.++||..|+ +.. ....++.+|.+ |++..-.............++|+.+++.
T Consensus 115 --~~---~~--~~~~~~-~~~~~v~~~~~G~~lv-~~~--~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~ 182 (276)
T 3no2_A 115 --EF---ET--GIERPH-AQFRQINKNKKGNYLV-PLF--ATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVAC 182 (276)
T ss_dssp --EE---CC--SCSSGG-GSCSCCEECTTSCEEE-EET--TTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEEC
T ss_pred --ec---cC--CCCccc-ccccCceECCCCCEEE-Eec--CCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEe
Confidence 00 00 000000 0123456788998654 332 33468888987 6654333222222234556677766543
Q ss_pred EeCCCCCCeEEEEEeccc
Q 004149 451 SSSPVDVPQVKYGYFVDK 468 (771)
Q Consensus 451 ~s~~~~p~~l~~~~~~~~ 468 (771)
.. ..+|+.++..++
T Consensus 183 ~~----~~~v~~~d~~tG 196 (276)
T 3no2_A 183 GD----AHCFVQLNLESN 196 (276)
T ss_dssp BT----TSEEEEECTTTC
T ss_pred CC----CCeEEEEeCcCC
Confidence 32 246777776544
No 492
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.22 E-value=0.066 Score=54.18 Aligned_cols=40 Identities=20% Similarity=0.190 Sum_probs=24.0
Q ss_pred cceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEec
Q 004149 100 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHV 141 (771)
Q Consensus 100 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 141 (771)
.....+++|||+ | |+.+......+++.++ .+++.+.+...
T Consensus 73 ~p~gia~~~dG~-l-~vad~~~~~~~v~~~d~~~g~~~~~~~~ 113 (306)
T 2p4o_A 73 KVSGLAFTSNGD-L-VATGWNADSIPVVSLVKSDGTVETLLTL 113 (306)
T ss_dssp EEEEEEECTTSC-E-EEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred CceeEEEcCCCc-E-EEEeccCCcceEEEEcCCCCeEEEEEeC
Confidence 456688999998 4 4444322234577776 56665555544
No 493
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.21 E-value=0.0054 Score=63.53 Aligned_cols=68 Identities=9% Similarity=0.255 Sum_probs=37.0
Q ss_pred ccceEEEeCCCCCeEEEEecCC---CCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEec
Q 004149 99 TGASAVVPSPSGSKLLVVRNPE---NESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAE 172 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~ 172 (771)
.....++++|+|+ |.++ +.. .....++.++ .+++..+.+.++.... .....+..+.++|++..+ |+++
T Consensus 67 ~~p~gv~~d~~g~-L~v~-D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~---~~~~~~~~v~vd~~~g~~-yvtd 138 (343)
T 2qe8_A 67 DTVLGIKSDGNGI-VWML-DNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPIT---LSNSFVNDLAVDLIHNFV-YISD 138 (343)
T ss_dssp SCEEEEEECSSSE-EEEE-ECHHHHTSCCEEEEEETTTTEEEEEEECCTTTS---CTTCCCCEEEEETTTTEE-EEEE
T ss_pred eEeeEEEEcCCCc-EEEE-cCCCCcCCCCeEEEEECCCCeEEEEEECChhhc---ccccccceEEEecCCCEE-EEEc
Confidence 4577889999986 4343 321 0134677777 5565455555432110 011123578899877655 4443
No 494
>2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens}
Probab=97.18 E-value=0.00092 Score=68.54 Aligned_cols=96 Identities=11% Similarity=0.054 Sum_probs=60.3
Q ss_pred CCCcEEEEEcCCCCCCCCCcchHHHHHHHHCCcEEEEECCCCCCCCChhhhhcCCCCccccchhhHHHHHHHHHHcCCCC
Q 004149 535 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 614 (771)
Q Consensus 535 ~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G~~V~~~d~rG~~~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 614 (771)
+..+.++++||.++. ...|......| ++.|+.+++++.. . ...++++.+.+...+... ..
T Consensus 44 ~~~~~l~~~hg~~g~--~~~~~~~~~~l---~~~v~~~~~~~~~----------~----~~~~~~~a~~~~~~i~~~-~~ 103 (316)
T 2px6_A 44 SSERPLFLVHPIEGS--TTVFHSLASRL---SIPTYGLQCTRAA----------P----LDSIHSLAAYYIDCIRQV-QP 103 (316)
T ss_dssp CSSCCEEEECCTTCC--SGGGHHHHHHC---SSCEEEECCCTTS----------C----TTCHHHHHHHHHHHHTTT-CS
T ss_pred CCCCeEEEECCCCCC--HHHHHHHHHhc---CCCEEEEECCCCC----------C----cCCHHHHHHHHHHHHHHh-CC
Confidence 345679999997654 34666666665 3999999998310 1 113444444433333321 12
Q ss_pred CCeEEEEEcChhHHHHHHHHHhCC---Cc---eeEEEecCCc
Q 004149 615 PSKVTVVGGSHGGFLTTHLIGQAP---DK---FVAAAARNPL 650 (771)
Q Consensus 615 ~~ri~l~G~S~GG~~a~~~a~~~p---~~---~~a~v~~~p~ 650 (771)
..++.++||||||.++..++.+.+ +. ++.+++.++.
T Consensus 104 ~~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~ 145 (316)
T 2px6_A 104 EGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 145 (316)
T ss_dssp SCCCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCS
T ss_pred CCCEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCC
Confidence 367999999999999999887643 34 6777775553
No 495
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.17 E-value=0.089 Score=58.98 Aligned_cols=207 Identities=14% Similarity=0.084 Sum_probs=122.2
Q ss_pred ccceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004149 99 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 99 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
.......|.+.+..|.+. +. ....|+.+. +++....++...... ..++++.+.++.|++. +.
T Consensus 349 ~~~~~ld~d~~~~~ly~s-D~--~~~~I~r~~~~g~~~~~v~~~~~~~---------p~GlAvD~~~~~lY~t-D~---- 411 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWT-DD--EVRAIRRSFIDGSGSQFVVTAQIAH---------PDGIAVDWVARNLYWT-DT---- 411 (619)
T ss_dssp SSEEEEEEETTTTEEEEE-ET--TTTEEEEEETTSCSCEEEECSSCSC---------CCEEEEETTTTEEEEE-ET----
T ss_pred CccEEEEEEcCCCeEEEE-eC--CCCeEEEEEcCCCccEEEEECCCCC---------cCceEEecccCcEEEE-eC----
Confidence 345677888888888655 32 234677777 444444444322111 1477888777777664 21
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccE
Q 004149 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 257 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~ 257 (771)
....|.+.++++...+.+. ...-..+..++..|....
T Consensus 412 --------------------------------------~~~~I~v~~~~G~~~~~l~-~~~l~~P~~iavdp~~G~---- 448 (619)
T 3s94_A 412 --------------------------------------GTDRIEVTRLNGTMRKILI-SEDLEEPRAIVLDPMVGY---- 448 (619)
T ss_dssp --------------------------------------TTTEEEEEETTSCSCEEEE-CTTCCSEEEEEEETTTTE----
T ss_pred --------------------------------------CCCcEEEEeCCCCeEEEEE-ECCCCCeeeEEEEcCCCc----
Confidence 2368899999887666662 122235678889987554
Q ss_pred EEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCC-CCccccceeecCCCCEEEEEec
Q 004149 258 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSA 336 (771)
Q Consensus 258 l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~-~~~~~~~p~~SpDG~~l~f~~~ 336 (771)
|+|+-|. ....|++.++ ++...+.|.. ........++++++++|++...
T Consensus 449 ly~tD~g-------------~~~~I~r~~~-----------------dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~ 498 (619)
T 3s94_A 449 MYWTDWG-------------EIPKIERAAL-----------------DGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDA 498 (619)
T ss_dssp EEEEECS-------------SSCEEEEEET-----------------TSCSCEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred EEEecCC-------------CCCEEEEEcc-----------------CCCccEEEEeCCCCCCeeeEEcccCCEEEEEEC
Confidence 7666432 1247999998 5544444433 3345667899999999999875
Q ss_pred CCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEE
Q 004149 337 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 416 (771)
Q Consensus 337 ~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~ 416 (771)
.. ..|.++++++...+.+.. ..+. .+..++. ++..||++- .....|+
T Consensus 499 ~~----------~~I~~~~~dG~~~~~~~~--------------~~l~-----~P~glav--~~~~ly~tD--~~~~~I~ 545 (619)
T 3s94_A 499 KT----------DKIEVMNTDGTGRRVLVE--------------DKIP-----HIFGFTL--LGDYVYWTD--WQRRSIE 545 (619)
T ss_dssp TT----------TEEEEEESSSCCCEEEEE--------------CCCC-----SSCCEEE--ETTEEEEEC--TTSSCEE
T ss_pred CC----------CEEEEEecCCCceEEEec--------------cCCC-----CcEEEEE--ECCEEEEee--cCCCeEE
Confidence 53 479999987654322210 0010 1223333 334666653 2345678
Q ss_pred EEECCCCcEEEe
Q 004149 417 SVNVSSGELLRI 428 (771)
Q Consensus 417 ~~d~~tg~~~~l 428 (771)
++|..+|+.+.+
T Consensus 546 ~~~k~~g~~~~~ 557 (619)
T 3s94_A 546 RVHKRSAEREVI 557 (619)
T ss_dssp EEESSSCCEEEE
T ss_pred EEEcCCCceEEE
Confidence 888877755444
No 496
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.09 E-value=0.044 Score=52.73 Aligned_cols=205 Identities=10% Similarity=0.074 Sum_probs=114.0
Q ss_pred ceEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCCCC
Q 004149 101 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 179 (771)
Q Consensus 101 ~~~~~~SPdG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~~~ 179 (771)
.+...|++ .+| |.+....+.+.+..++ ..++..+.+.++.... +...+++|.+|+-+.
T Consensus 23 tqGL~~~~--~~L-yestG~~g~S~v~~vD~~tgkv~~~~~l~~~~f----------geGi~~~~~~ly~lt-------- 81 (243)
T 3mbr_X 23 TEGLFYLR--GHL-YESTGETGRSSVRKVDLETGRILQRAEVPPPYF----------GAGIVAWRDRLIQLT-------- 81 (243)
T ss_dssp EEEEEEET--TEE-EEEECCTTSCEEEEEETTTCCEEEEEECCTTCC----------EEEEEEETTEEEEEE--------
T ss_pred cccEEEEC--CEE-EEECCCCCCceEEEEECCCCCEEEEEeCCCCcc----------eeEEEEeCCEEEEEE--------
Confidence 44567775 344 6666555677888888 7777777777655442 334555677765542
Q ss_pred CccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEE
Q 004149 180 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 259 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~ 259 (771)
| ....++++|.++.++..- .+... .....++||+. |+
T Consensus 82 ----------------------------w-------~~~~v~v~D~~tl~~~~t--i~~~~--~Gwglt~dg~~----L~ 118 (243)
T 3mbr_X 82 ----------------------------W-------RNHEGFVYDLATLTPRAR--FRYPG--EGWALTSDDSH----LY 118 (243)
T ss_dssp ----------------------------S-------SSSEEEEEETTTTEEEEE--EECSS--CCCEEEECSSC----EE
T ss_pred ----------------------------e-------eCCEEEEEECCcCcEEEE--EeCCC--CceEEeeCCCE----EE
Confidence 1 237899999998876544 22221 23456788886 55
Q ss_pred EEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcc-eecCC--CCcc---ccceeecCCCCEEEE
Q 004149 260 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTE--SISS---AFFPRFSPDGKFLVF 333 (771)
Q Consensus 260 ~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~lt~--~~~~---~~~p~~SpDG~~l~f 333 (771)
. ++ +...|+.+|. ++.+. .++.- .... .....|. +|+ | |
T Consensus 119 v-Sd--------------gs~~l~~iDp-----------------~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~-l-y 163 (243)
T 3mbr_X 119 M-SD--------------GTAVIRKLDP-----------------DTLQQVGSIKVTAGGRPLDNLNELEWV-NGE-L-L 163 (243)
T ss_dssp E-EC--------------SSSEEEEECT-----------------TTCCEEEEEECEETTEECCCEEEEEEE-TTE-E-E
T ss_pred E-EC--------------CCCeEEEEeC-----------------CCCeEEEEEEEccCCcccccceeeEEe-CCE-E-E
Confidence 4 42 3347999997 55432 22321 1111 1223343 665 4 4
Q ss_pred EecCCCCCCCCccccccceeeecCCCCCCCCccceeeEEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCee
Q 004149 334 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 413 (771)
Q Consensus 334 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 413 (771)
...-. ...|.++|.++++.... -++..+.........+ -...+..++|.|++++||++. ..+.
T Consensus 164 anvw~---------s~~I~vIDp~tG~V~~~----idl~~l~~~~~~~~~~--~~~vlNGIA~d~~~~~lfVTG--K~wp 226 (243)
T 3mbr_X 164 ANVWL---------TSRIARIDPASGKVVAW----IDLQALVPDADALTDS--TNDVLNGIAFDAEHDRLFVTG--KRWP 226 (243)
T ss_dssp EEETT---------TTEEEEECTTTCBEEEE----EECGGGSTTTTSCCCT--TSSCEEEEEEETTTTEEEEEE--TTCS
T ss_pred EEECC---------CCeEEEEECCCCCEEEE----EECCcCccccccccCC--cCCceEEEEEcCCCCEEEEEC--CCCC
Confidence 33321 35799999988774211 0000011000000000 001235789999999888764 5667
Q ss_pred EEEEEECC
Q 004149 414 VIISVNVS 421 (771)
Q Consensus 414 ~l~~~d~~ 421 (771)
.||.|.+.
T Consensus 227 ~~~~v~~~ 234 (243)
T 3mbr_X 227 MLYEIRLT 234 (243)
T ss_dssp EEEEEEEC
T ss_pred cEEEEEEe
Confidence 88887653
No 497
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.97 E-value=0.02 Score=55.61 Aligned_cols=144 Identities=10% Similarity=-0.018 Sum_probs=76.5
Q ss_pred CceEEEEEccCCceeeccCCCCCCccceEEEecCCCCCccEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhh
Q 004149 217 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 296 (771)
Q Consensus 217 ~~~l~v~d~~~~~~~~l~~~~~~~~~~~~~wspDg~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 296 (771)
...++++|.++.++..- .+.. ......++||+. |+ +++ ....|+.+|.
T Consensus 115 ~~~v~V~D~~Tl~~~~t--i~~~--~eGwGLt~Dg~~----L~-vSd--------------Gs~~l~~iDp--------- 162 (268)
T 3nok_A 115 EGLLFTWSGMPPQRERT--TRYS--GEGWGLCYWNGK----LV-RSD--------------GGTMLTFHEP--------- 162 (268)
T ss_dssp SCEEEEEETTTTEEEEE--EECS--SCCCCEEEETTE----EE-EEC--------------SSSEEEEECT---------
T ss_pred CCEEEEEECCcCcEEEE--EeCC--CceeEEecCCCE----EE-EEC--------------CCCEEEEEcC---------
Confidence 37899999998876544 2221 112345678875 44 442 3348999997
Q ss_pred hhhhcCCCCCCcc-eecC--CCCcc---ccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCCCCCCCccceee
Q 004149 297 LELKESSSEDLPV-VNLT--ESISS---AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVD 370 (771)
Q Consensus 297 ~~~~~~~~~~~~~-~~lt--~~~~~---~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~ 370 (771)
++.+. .++. ..... .....|. ||+ |+ ...-. ...|.++|.++++..... +
T Consensus 163 --------~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~-ly-anvw~---------s~~I~vIDp~TG~V~~~I----d 218 (268)
T 3nok_A 163 --------DGFALVGAVQVKLRGQPVELINELECA-NGV-IY-ANIWH---------SSDVLEIDPATGTVVGVI----D 218 (268)
T ss_dssp --------TTCCEEEEEECEETTEECCCEEEEEEE-TTE-EE-EEETT---------CSEEEEECTTTCBEEEEE----E
T ss_pred --------CCCeEEEEEEeCCCCcccccccccEEe-CCE-EE-EEECC---------CCeEEEEeCCCCcEEEEE----E
Confidence 55443 2222 22111 2234555 774 54 43322 357999999887752110 0
Q ss_pred EEecccccCCCCCcccccCCCCCCccccCCCEEEEEeeeCCeeEEEEEEC
Q 004149 371 VIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 420 (771)
Q Consensus 371 ~~~~~~~~~~~~f~g~~~~~~~~~~~s~dg~~l~~~~~~~~~~~l~~~d~ 420 (771)
+..+.........+ ....+..++|.|++++||++. ..+..||.|.+
T Consensus 219 l~~L~~~~~~~~~~--~~~vlNGIA~dp~~~rlfVTG--K~Wp~~~ev~~ 264 (268)
T 3nok_A 219 ASALTRAVAGQVTN--PEAVLNGIAVEPGSGRIFMTG--KLWPRLFEVRL 264 (268)
T ss_dssp CHHHHHHHTTTCCC--TTCCEEEEEECTTTCCEEEEE--TTCSEEEEEEE
T ss_pred CCCCcccccccccC--cCCceEEEEEcCCCCEEEEeC--CCCCceEEEEE
Confidence 00000000000000 001235789999999887754 56677887764
No 498
>4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A*
Probab=96.85 E-value=0.017 Score=57.36 Aligned_cols=129 Identities=20% Similarity=0.242 Sum_probs=79.5
Q ss_pred CCceEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCCcchHHHHHHHHCC---------------------cEEEEECCC
Q 004149 517 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVG---------------------YSLLIVNYR 575 (771)
Q Consensus 517 ~g~~l~~~~~~P~~~~~~~~~p~vv~~HGg~~~~~~~~~~~~~~~la~~G---------------------~~V~~~d~r 575 (771)
++..+..|++.... .....|+|+++.|||+.... ...|.+.| ..++.+|.+
T Consensus 32 ~~~~lFywf~es~~--~p~~~Pl~lWlnGGPGcSS~------~g~~~E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD~P 103 (300)
T 4az3_A 32 GSKHLHYWFVESQK--DPENSPVVLWLNGGPGCSSL------DGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESP 103 (300)
T ss_dssp TTEEEEEEEECCSS--CTTTSCEEEEECCTTTBCTH------HHHHHTTSSEEECTTSSCEEECTTCGGGSSEEEEECCS
T ss_pred CCCeEEEEEEEcCC--CCCCCCEEEEECCCCcHHHH------HHHHhcCCCceecCCCccccccCccHHhhhcchhhcCC
Confidence 35678888886543 34567999999999987531 12222222 567788877
Q ss_pred CCCCCChhhhhcCCCCccccchhhHHHHHH-HHHHcCCCCCCeEEEEEcChhHHHHHHHHHhC----CCceeEEEecCCc
Q 004149 576 GSLGFGEEALQSLPGKVGSQDVNDVLTAID-HVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA----PDKFVAAAARNPL 650 (771)
Q Consensus 576 G~~~~g~~~~~~~~~~~~~~~~~D~~~~i~-~l~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~----p~~~~a~v~~~p~ 650 (771)
-..|+....... ..........|+..++. |+...+.....++.|.|.|+||..+-.+|..- .-.++++++.+|+
T Consensus 104 vGtGfSy~~~~~-~~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg~ 182 (300)
T 4az3_A 104 AGVGFSYSDDKF-YATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 182 (300)
T ss_dssp TTSTTCEETTCC-CCCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred CcccccccCCCc-ccccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCCc
Confidence 545554332111 00111122455555554 44444445567899999999999998887531 2247999999999
Q ss_pred cchh
Q 004149 651 CNLA 654 (771)
Q Consensus 651 ~~~~ 654 (771)
++..
T Consensus 183 ~d~~ 186 (300)
T 4az3_A 183 SSYE 186 (300)
T ss_dssp SBHH
T ss_pred cCHH
Confidence 8753
No 499
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.85 E-value=0.019 Score=61.34 Aligned_cols=158 Identities=15% Similarity=0.260 Sum_probs=90.9
Q ss_pred cceEEEeCC-CCCeEEEEecCCCCCCeEEEEe-cCCcceEEEecCCcccccccCCCcccceeecCCCCeEEEEecCCCCC
Q 004149 100 GASAVVPSP-SGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 177 (771)
Q Consensus 100 ~~~~~~~SP-dG~~la~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~wSpDg~~la~~~~~~~~~ 177 (771)
....++++| ++..|. +.+.. ..++.++ .++....+....... ..++|++||++|+.. +....
T Consensus 138 ~P~~lavdp~~~g~Ly-v~d~~---~~I~~id~~~~~v~~~~~~~~~P----------~~ia~d~~G~~lyva-d~~~~- 201 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLY-LVGEQ---HPTRLIDFEKEYVSTVYSGLSKV----------RTICWTHEADSMIIT-NDQNN- 201 (430)
T ss_dssp CCCEEEEETTEEEEEE-EEEBT---EEEEEEETTTTEEEEEECCCSCE----------EEEEECTTSSEEEEE-ECCSC-
T ss_pred CCCEEEECCCCCCeEE-EEeCC---CcEEEEECCCCEEEEEecCCCCc----------ceEEEeCCCCEEEEE-eCCCC-
Confidence 456788999 566664 44432 4577777 444444443321112 489999999966554 32110
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcccccCCcCcccCCccCceEEEEEccCCce--eeccCCCCCCccceEEEecCCCCCc
Q 004149 178 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIPKSLSVGQVVWAPLNEGLH 255 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~~~~--~~l~~~~~~~~~~~~~wspDg~~~~ 255 (771)
.....+++++.+++-. +.+ ..-..+..++++|++..
T Consensus 202 -------------------------------------~~~~~v~~~~~~g~~~~~~~l---~~~~~p~giavdp~~g~-- 239 (430)
T 3tc9_A 202 -------------------------------------NDRPNNYILTRESGFKVITEL---TKGQNCNGAETHPINGE-- 239 (430)
T ss_dssp -------------------------------------TTSEEEEEEEGGGTSCSEEEE---EECSSCCCEEECTTTCC--
T ss_pred -------------------------------------cccceEEEEeCCCceeeeeee---ccCCCceEEEEeCCCCE--
Confidence 0123455566544322 222 11224567889996555
Q ss_pred cEEEEEeecCcceeeeeeeeccCCceeEEEecccccchhhhhhhhcCCCCCCcceecCC--CCccccceeecCCCCEEEE
Q 004149 256 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE--SISSAFFPRFSPDGKFLVF 333 (771)
Q Consensus 256 ~~l~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~lt~--~~~~~~~p~~SpDG~~l~f 333 (771)
|+++.+ ...+|++++. +++....+.. ........+|+|||++|++
T Consensus 240 --lyv~d~--------------~~~~V~~~~~-----------------~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv 286 (430)
T 3tc9_A 240 --LYFNSW--------------NAGQVFRYDF-----------------TTQETTPLFTIQDSGWEFHIQFHPSGNYAYI 286 (430)
T ss_dssp --EEEEET--------------TTTEEEEEET-----------------TTTEEEEEEECSSSSCCEEEEECTTSSEEEE
T ss_pred --EEEEEC--------------CCCEEEEEEC-----------------CCCcEEEEEEcCCCCcceeEEEcCCCCEEEE
Confidence 777652 2347999997 5554423221 1223567899999998877
Q ss_pred EecCCCCCCCCccccccceeeecCC
Q 004149 334 LSAKSSVDSGAHSATDSLHRIDWPT 358 (771)
Q Consensus 334 ~~~~~~~~~g~~~~~~~l~~~d~~~ 358 (771)
..... .+|++++.+.
T Consensus 287 ~d~~~----------~~I~~~~~d~ 301 (430)
T 3tc9_A 287 VVVNQ----------HYILRSDYDW 301 (430)
T ss_dssp EETTT----------TEEEEEEEET
T ss_pred EECCC----------CEEEEEeCCc
Confidence 76542 4688877654
No 500
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.84 E-value=0.18 Score=51.86 Aligned_cols=109 Identities=15% Similarity=0.006 Sum_probs=63.6
Q ss_pred CceEEEEEccCCceeeccCCC--CCCccceEEEecCCCCCccEEEEEee--cCcceeeee-eeeccCCceeEEEeccccc
Q 004149 217 QPSLFVININSGEVQAVKGIP--KSLSVGQVVWAPLNEGLHQYLVFVGW--SSETRKLGI-KYCYNRPCALYAVRVSLYK 291 (771)
Q Consensus 217 ~~~l~v~d~~~~~~~~l~~~~--~~~~~~~~~wspDg~~~~~~l~~~~~--~~~~~~~g~-~~~~~~~~~l~~~d~~~~~ 291 (771)
...||.++.+++..+.+.... .-....+....+||+ +++... ..++..... .+.....+.||+++.
T Consensus 140 ~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-----fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~---- 210 (355)
T 3sre_A 140 TVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-----FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP---- 210 (355)
T ss_dssp EEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-----EEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT----
T ss_pred eEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-----EEecCCcEeCCcccccchhhccCCccEEEEEEC----
Confidence 356777777766554442111 122567888999987 555432 111100000 000012357999874
Q ss_pred chhhhhhhhcCCCCCCcceecCCCCccccceeecCCCCEEEEEecCCCCCCCCccccccceeeecCCC
Q 004149 292 SEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 359 (771)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~p~~SpDG~~l~f~~~~~~~~~g~~~~~~~l~~~d~~~~ 359 (771)
++.+.+.........++|||||++|++.... ..+|+++++...
T Consensus 211 ---------------~~~~~~~~~l~~pNGia~spDg~~lYvadt~----------~~~I~~~~~~~~ 253 (355)
T 3sre_A 211 ---------------NDVRVVAEGFDFANGINISPDGKYVYIAELL----------AHKIHVYEKHAN 253 (355)
T ss_dssp ---------------TCCEEEEEEESSEEEEEECTTSSEEEEEEGG----------GTEEEEEEECTT
T ss_pred ---------------CeEEEeecCCcccCcceECCCCCEEEEEeCC----------CCeEEEEEECCC
Confidence 3555555444556789999999999887754 357999998643
Done!