Query 004155
Match_columns 771
No_of_seqs 892 out of 4976
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 16:02:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004155.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004155hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 5E-54 1.7E-58 455.2 15.9 259 421-698 13-288 (299)
2 4aoj_A High affinity nerve gro 100.0 1.8E-53 6.2E-58 457.1 19.7 261 421-700 41-320 (329)
3 4gt4_A Tyrosine-protein kinase 100.0 3.6E-53 1.2E-57 450.5 19.5 258 422-698 27-305 (308)
4 3omv_A RAF proto-oncogene seri 100.0 4.7E-52 1.6E-56 440.3 20.5 257 421-697 36-298 (307)
5 4b9d_A Serine/threonine-protei 100.0 2.9E-51 1E-55 440.3 18.4 250 421-692 24-276 (350)
6 4fih_A Serine/threonine-protei 100.0 4.5E-51 1.5E-55 438.2 19.3 249 421-692 74-323 (346)
7 3hmm_A TGF-beta receptor type- 100.0 3.6E-51 1.2E-55 435.8 12.3 263 421-698 3-296 (303)
8 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.3E-50 4.3E-55 428.4 16.1 247 421-691 32-283 (311)
9 3fpq_A Serine/threonine-protei 100.0 4.1E-50 1.4E-54 422.3 19.9 246 424-692 29-282 (290)
10 4g3f_A NF-kappa-beta-inducing 100.0 2.4E-50 8.2E-55 431.3 17.9 251 421-697 58-314 (336)
11 4fie_A Serine/threonine-protei 100.0 6.4E-50 2.2E-54 439.6 20.8 249 421-692 151-400 (423)
12 3hyh_A Carbon catabolite-derep 100.0 1.5E-49 5.1E-54 414.4 20.4 245 421-692 13-262 (275)
13 4ase_A Vascular endothelial gr 100.0 4E-50 1.4E-54 434.6 16.5 266 414-697 57-345 (353)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.6E-49 5.6E-54 419.8 13.0 242 421-687 24-271 (304)
15 4g31_A Eukaryotic translation 100.0 2.6E-47 9E-52 404.2 20.8 250 421-692 5-279 (299)
16 3uim_A Brassinosteroid insensi 100.0 1.8E-46 6E-51 404.6 20.1 293 408-700 17-312 (326)
17 2qkw_B Protein kinase; three-h 100.0 1.3E-46 4.3E-51 405.0 18.7 287 411-700 29-316 (321)
18 4b99_A Mitogen-activated prote 100.0 2.4E-45 8.4E-50 403.9 21.5 271 420-698 53-352 (398)
19 4f9c_A Cell division cycle 7-r 100.0 1E-44 3.5E-49 394.7 22.9 202 416-629 16-251 (361)
20 3uto_A Twitchin; kinase, muscl 100.0 3.1E-44 1.1E-48 414.1 20.4 252 420-692 156-410 (573)
21 3v5w_A G-protein coupled recep 100.0 5.2E-44 1.8E-48 409.7 20.1 248 421-692 189-449 (689)
22 3fxz_A Serine/threonine-protei 100.0 1.4E-42 4.9E-47 369.3 22.4 250 420-692 19-269 (297)
23 3s95_A LIMK-1, LIM domain kina 100.0 6.5E-43 2.2E-47 374.0 19.9 259 420-698 9-281 (310)
24 2nru_A Interleukin-1 receptor- 100.0 7.5E-42 2.6E-46 365.1 27.1 282 408-698 12-305 (307)
25 2c30_A Serine/threonine-protei 100.0 7.3E-42 2.5E-46 368.0 24.2 263 407-692 21-294 (321)
26 3p86_A Serine/threonine-protei 100.0 5.9E-43 2E-47 374.4 15.6 266 414-700 30-299 (309)
27 4hcu_A Tyrosine-protein kinase 100.0 2.3E-42 7.8E-47 361.9 17.7 254 421-697 10-264 (269)
28 2psq_A Fibroblast growth facto 100.0 5.5E-42 1.9E-46 376.3 21.5 260 420-698 80-363 (370)
29 4eqm_A Protein kinase; transfe 100.0 1.5E-41 5.2E-46 360.8 24.0 263 420-701 10-277 (294)
30 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.7E-42 9.2E-47 361.0 17.9 258 420-700 7-265 (268)
31 3kul_A Ephrin type-A receptor 100.0 2.2E-42 7.4E-47 372.8 17.0 258 421-700 49-314 (325)
32 3zgw_A Maternal embryonic leuc 100.0 4.4E-42 1.5E-46 373.0 19.0 250 419-692 8-260 (347)
33 3fe3_A MAP/microtubule affinit 100.0 1E-41 3.4E-46 367.8 21.2 247 420-692 14-264 (328)
34 3soc_A Activin receptor type-2 100.0 2.2E-42 7.6E-47 372.2 15.3 269 420-698 23-317 (322)
35 2qol_A Ephrin receptor; recept 100.0 6.3E-42 2.1E-46 376.2 18.5 258 420-699 44-309 (373)
36 3ugc_A Tyrosine-protein kinase 100.0 1.2E-42 4.1E-47 369.1 12.4 265 420-697 9-289 (295)
37 3gen_A Tyrosine-protein kinase 100.0 8.4E-42 2.9E-46 360.2 18.0 255 420-697 23-278 (283)
38 4aw2_A Serine/threonine-protei 100.0 2.2E-42 7.7E-47 386.2 13.3 264 411-692 64-338 (437)
39 1qcf_A Haematopoetic cell kina 100.0 9E-42 3.1E-46 385.0 17.8 260 418-700 185-445 (454)
40 3vhe_A Vascular endothelial gr 100.0 8.3E-42 2.8E-46 373.1 16.6 269 411-697 12-353 (359)
41 1o6l_A RAC-beta serine/threoni 100.0 4.6E-41 1.6E-45 363.8 21.3 248 420-692 4-260 (337)
42 2yab_A Death-associated protei 100.0 9.4E-41 3.2E-45 364.7 23.9 248 419-692 10-272 (361)
43 1luf_A Muscle-specific tyrosin 100.0 1.8E-41 6.2E-46 367.8 17.7 263 419-700 45-336 (343)
44 3cbl_A C-FES, proto-oncogene t 100.0 6.5E-42 2.2E-46 376.8 14.3 256 420-697 113-372 (377)
45 1csn_A Casein kinase-1; phosph 100.0 1.6E-40 5.3E-45 353.0 24.4 263 420-700 9-284 (298)
46 1opk_A P150, C-ABL, proto-onco 100.0 2E-41 7E-46 386.0 18.3 258 420-699 219-478 (495)
47 2izr_A Casein kinase I isoform 100.0 1.2E-40 4.2E-45 359.8 23.5 261 420-699 8-281 (330)
48 3q4u_A Activin receptor type-1 100.0 4.1E-41 1.4E-45 358.0 19.3 261 419-697 6-300 (301)
49 3dtc_A Mitogen-activated prote 100.0 3.8E-41 1.3E-45 352.8 18.7 253 420-696 6-270 (271)
50 3tt0_A Basic fibroblast growth 100.0 2.3E-41 7.9E-46 373.1 17.6 262 420-700 68-353 (382)
51 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.7E-41 9.2E-46 380.8 18.4 259 419-700 182-441 (452)
52 3l9p_A Anaplastic lymphoma kin 100.0 1.7E-41 5.6E-46 372.2 16.2 263 420-701 70-347 (367)
53 2y0a_A Death-associated protei 100.0 6.8E-41 2.3E-45 361.2 20.7 251 420-692 10-271 (326)
54 3tki_A Serine/threonine-protei 100.0 2.9E-41 9.9E-46 363.6 17.7 252 420-692 6-261 (323)
55 3niz_A Rhodanese family protei 100.0 1.4E-40 4.8E-45 356.3 23.0 266 419-692 19-300 (311)
56 3kfa_A Tyrosine-protein kinase 100.0 1.7E-41 5.7E-46 358.8 15.5 258 418-697 10-269 (288)
57 1tki_A Titin; serine kinase, m 100.0 9.1E-41 3.1E-45 359.4 21.3 247 420-692 4-257 (321)
58 1mp8_A Focal adhesion kinase 1 100.0 4.7E-41 1.6E-45 354.4 18.1 256 419-697 13-274 (281)
59 3poz_A Epidermal growth factor 100.0 3.9E-41 1.3E-45 363.3 17.6 256 421-699 15-278 (327)
60 2ivs_A Proto-oncogene tyrosine 100.0 4.9E-41 1.7E-45 359.6 17.9 259 420-697 22-309 (314)
61 4f0f_A Serine/threonine-protei 100.0 1.4E-40 4.8E-45 351.6 21.0 253 420-697 18-287 (287)
62 3v8s_A RHO-associated protein 100.0 1.5E-41 5.1E-46 376.6 14.0 257 413-692 61-329 (410)
63 3t9t_A Tyrosine-protein kinase 100.0 3.7E-41 1.3E-45 351.8 16.2 255 421-698 8-263 (267)
64 4euu_A Serine/threonine-protei 100.0 2.8E-40 9.5E-45 355.2 23.3 272 420-697 8-307 (319)
65 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.2E-41 1.4E-45 366.5 16.7 249 419-692 21-280 (353)
66 2zv2_A Calcium/calmodulin-depe 100.0 9.6E-41 3.3E-45 355.1 19.1 249 420-692 12-292 (298)
67 3op5_A Serine/threonine-protei 100.0 1.5E-40 5.1E-45 364.2 21.2 271 419-702 33-332 (364)
68 1kob_A Twitchin; kinase, intra 100.0 1.9E-40 6.6E-45 365.5 21.8 252 420-692 50-304 (387)
69 3c0i_A Peripheral plasma membr 100.0 1.1E-40 3.8E-45 363.3 19.5 255 420-692 23-286 (351)
70 3lxl_A Tyrosine-protein kinase 100.0 2.1E-41 7E-46 365.3 13.4 274 421-701 23-305 (327)
71 2bdw_A Hypothetical protein K1 100.0 1.9E-40 6.5E-45 362.9 21.2 253 418-692 26-284 (362)
72 3qup_A Tyrosine-protein kinase 100.0 8.6E-41 2.9E-45 359.6 18.0 265 418-701 20-300 (323)
73 3lb7_A RAF proto-oncogene seri 100.0 1.8E-40 6.1E-45 354.8 20.0 260 420-699 35-300 (307)
74 1qpc_A LCK kinase; alpha beta 100.0 1.2E-40 4.2E-45 350.5 18.3 256 420-698 12-268 (279)
75 3kmu_A ILK, integrin-linked ki 100.0 1.2E-40 4E-45 348.5 17.9 251 421-698 10-269 (271)
76 1t46_A HOMO sapiens V-KIT hard 100.0 1.3E-40 4.3E-45 356.3 18.4 261 419-697 21-305 (313)
77 1k9a_A Carboxyl-terminal SRC k 100.0 2.2E-40 7.5E-45 373.2 21.3 251 420-698 192-444 (450)
78 1rjb_A FL cytokine receptor; k 100.0 7.2E-41 2.5E-45 363.5 16.7 264 419-700 43-335 (344)
79 3dbq_A Dual specificity protei 100.0 1.3E-40 4.4E-45 361.7 18.7 250 420-692 8-273 (343)
80 3lxp_A Non-receptor tyrosine-p 100.0 8.1E-41 2.8E-45 359.3 16.9 266 423-697 33-308 (318)
81 1fot_A TPK1 delta, CAMP-depend 100.0 2.3E-40 7.9E-45 355.5 20.3 244 421-692 6-258 (318)
82 3soa_A Calcium/calmodulin-depe 100.0 2.6E-40 8.8E-45 370.8 21.5 253 419-692 9-267 (444)
83 3o0g_A Cell division protein k 100.0 2.4E-40 8.4E-45 350.9 20.2 262 421-692 2-282 (292)
84 2vd5_A DMPK protein; serine/th 100.0 3.5E-41 1.2E-45 373.9 14.2 263 411-692 51-327 (412)
85 2pmi_A Negative RE, cyclin-dep 100.0 4.4E-40 1.5E-44 353.5 22.0 261 420-692 4-293 (317)
86 4fr4_A YANK1, serine/threonine 100.0 2.4E-40 8.2E-45 363.8 20.4 249 421-692 15-271 (384)
87 1ob3_A PFPK5, cell division co 100.0 3.2E-40 1.1E-44 349.4 20.5 262 421-692 2-280 (288)
88 3p1a_A MYT1 kinase, membrane-a 100.0 3.6E-41 1.2E-45 360.9 13.4 245 420-692 56-304 (311)
89 4dc2_A Protein kinase C IOTA t 100.0 2.6E-40 9.1E-45 364.7 20.3 250 420-687 51-307 (396)
90 3gxj_A TGF-beta receptor type- 100.0 1.4E-41 4.8E-46 361.8 9.6 260 420-701 2-299 (303)
91 3qd2_B Eukaryotic translation 100.0 2.7E-40 9.2E-45 356.5 19.5 251 420-692 5-325 (332)
92 3uc3_A Serine/threonine-protei 100.0 3.7E-40 1.3E-44 360.5 20.8 252 420-692 19-274 (361)
93 4e5w_A Tyrosine-protein kinase 100.0 3.8E-41 1.3E-45 358.6 12.6 267 421-697 21-300 (302)
94 1xjd_A Protein kinase C, theta 100.0 1.3E-40 4.3E-45 361.4 16.7 250 417-691 13-268 (345)
95 2eva_A TAK1 kinase - TAB1 chim 100.0 1.9E-40 6.5E-45 354.6 17.7 256 421-700 8-264 (307)
96 2w4o_A Calcium/calmodulin-depe 100.0 3.2E-40 1.1E-44 359.3 19.6 249 419-692 51-305 (349)
97 2pvf_A Fibroblast growth facto 100.0 3.3E-40 1.1E-44 357.0 19.5 261 420-699 34-318 (334)
98 3cc6_A Protein tyrosine kinase 100.0 2.9E-40 9.8E-45 348.2 18.4 256 419-697 10-271 (281)
99 2buj_A Serine/threonine-protei 100.0 2.6E-40 8.8E-45 354.8 18.1 264 420-700 28-307 (317)
100 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.3E-40 1.5E-44 358.2 20.1 244 421-692 41-293 (350)
101 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.1E-40 3.9E-45 360.4 15.4 246 420-692 8-258 (336)
102 3llt_A Serine/threonine kinase 100.0 8.2E-41 2.8E-45 365.5 14.5 275 407-692 21-355 (360)
103 2wqm_A Serine/threonine-protei 100.0 2.3E-40 7.9E-45 354.1 17.6 263 421-700 32-298 (310)
104 2x4f_A Myosin light chain kina 100.0 4E-40 1.4E-44 361.7 19.9 246 426-692 94-342 (373)
105 2zmd_A Dual specificity protei 100.0 3.7E-40 1.3E-44 364.3 19.7 249 421-692 56-320 (390)
106 4agu_A Cyclin-dependent kinase 100.0 5.1E-40 1.7E-44 351.5 20.0 264 421-692 3-284 (311)
107 2h8h_A Proto-oncogene tyrosine 100.0 1.2E-40 4.2E-45 383.0 16.2 259 419-700 265-524 (535)
108 2v62_A Serine/threonine-protei 100.0 1.5E-39 5.2E-44 353.5 24.0 265 420-698 36-327 (345)
109 1u59_A Tyrosine-protein kinase 100.0 7.2E-40 2.5E-44 346.4 20.8 255 421-698 9-271 (287)
110 3og7_A AKAP9-BRAF fusion prote 100.0 4.4E-40 1.5E-44 348.5 19.1 260 419-698 22-287 (289)
111 3kex_A Receptor tyrosine-prote 100.0 8.8E-41 3E-45 360.2 13.9 256 421-699 13-276 (325)
112 3a8x_A Protein kinase C IOTA t 100.0 9.4E-40 3.2E-44 354.9 22.0 249 421-687 9-264 (345)
113 2eue_A Carbon catabolite derep 100.0 7.7E-40 2.6E-44 343.8 20.4 245 421-692 13-262 (275)
114 2i0e_A Protein kinase C-beta I 100.0 3.8E-40 1.3E-44 358.7 18.7 249 419-692 18-276 (353)
115 2w5a_A Serine/threonine-protei 100.0 2.6E-40 8.9E-45 347.9 16.6 260 420-696 5-271 (279)
116 3a62_A Ribosomal protein S6 ki 100.0 4.8E-40 1.6E-44 354.8 18.9 248 420-692 16-276 (327)
117 3is5_A Calcium-dependent prote 100.0 3.4E-40 1.2E-44 348.7 17.2 253 420-692 21-278 (285)
118 3f3z_A Calcium/calmodulin-depe 100.0 1.1E-39 3.6E-44 343.1 20.8 247 419-692 7-261 (277)
119 4fvq_A Tyrosine-protein kinase 100.0 1.5E-40 5E-45 351.7 14.3 253 420-700 7-276 (289)
120 3hko_A Calcium/calmodulin-depe 100.0 3.6E-40 1.2E-44 358.1 17.6 260 415-692 20-330 (345)
121 2a2a_A Death-associated protei 100.0 1.5E-39 5E-44 349.9 22.2 252 419-692 10-272 (321)
122 3mdy_A Bone morphogenetic prot 100.0 1.4E-39 4.7E-44 352.0 22.0 272 411-701 27-333 (337)
123 4hgt_A Casein kinase I isoform 100.0 2.4E-39 8.2E-44 343.3 23.0 264 419-700 7-281 (296)
124 2ac3_A MAP kinase-interacting 100.0 4.7E-40 1.6E-44 352.6 17.7 264 420-692 11-295 (316)
125 2y94_A 5'-AMP-activated protei 100.0 2.3E-39 7.8E-44 365.6 24.1 251 421-697 16-273 (476)
126 3gni_B Strad alpha; kinase fol 100.0 1.2E-39 4E-44 360.4 21.3 269 419-692 23-333 (389)
127 1p4o_A Insulin-like growth fac 100.0 2.5E-40 8.4E-45 355.8 15.3 270 411-699 15-299 (322)
128 3kn6_A Ribosomal protein S6 ki 100.0 6.2E-40 2.1E-44 353.5 18.5 244 426-692 16-270 (325)
129 2xir_A Vascular endothelial gr 100.0 3E-40 1E-44 353.8 16.0 269 411-697 17-308 (316)
130 3kk8_A Calcium/calmodulin depe 100.0 1.5E-39 5.3E-44 343.0 21.1 251 420-692 5-261 (284)
131 3uzp_A CKI-delta, CKID, casein 100.0 2.6E-39 9E-44 343.2 22.9 264 420-701 8-282 (296)
132 1u5q_A Serine/threonine protei 100.0 6.5E-40 2.2E-44 356.7 18.6 245 421-692 54-305 (348)
133 3fdn_A Serine/threonine-protei 100.0 6.9E-40 2.4E-44 344.9 18.2 247 419-692 7-257 (279)
134 3g33_A Cell division protein k 100.0 1.4E-39 4.7E-44 347.9 20.8 263 419-692 7-296 (308)
135 4ejn_A RAC-alpha serine/threon 100.0 3.3E-40 1.1E-44 371.5 16.6 248 420-692 147-404 (446)
136 3ork_A Serine/threonine protei 100.0 3.1E-40 1E-44 353.6 15.5 257 420-696 11-278 (311)
137 1mqb_A Ephrin type-A receptor 100.0 1.1E-39 3.6E-44 353.0 19.8 257 421-699 44-309 (333)
138 3lzb_A Epidermal growth factor 100.0 6E-40 2E-44 354.0 17.6 258 420-700 14-279 (327)
139 3oz6_A Mitogen-activated prote 100.0 9E-40 3.1E-44 361.2 19.3 264 418-693 6-329 (388)
140 1fvr_A Tyrosine-protein kinase 100.0 6E-40 2.1E-44 353.8 17.4 259 421-700 25-301 (327)
141 2ozo_A Tyrosine-protein kinase 100.0 1.3E-39 4.6E-44 379.9 21.3 247 428-697 343-596 (613)
142 2h34_A Serine/threonine-protei 100.0 6.3E-40 2.2E-44 350.9 16.9 261 420-701 33-298 (309)
143 2w1i_A JAK2; chromosomal rearr 100.0 1.6E-40 5.5E-45 358.2 12.3 265 420-697 40-320 (326)
144 2r5t_A Serine/threonine-protei 100.0 5.1E-40 1.8E-44 360.3 16.5 250 421-695 38-292 (373)
145 2i1m_A Macrophage colony-stimu 100.0 3.4E-40 1.2E-44 356.5 14.8 263 417-697 42-324 (333)
146 2a19_B Interferon-induced, dou 100.0 5.7E-40 1.9E-44 346.0 16.1 252 419-702 9-277 (284)
147 3dls_A PAS domain-containing s 100.0 8.2E-40 2.8E-44 354.1 17.7 243 419-693 22-275 (335)
148 3brb_A Proto-oncogene tyrosine 100.0 1.6E-39 5.5E-44 348.1 19.8 264 416-698 29-307 (313)
149 3lm5_A Serine/threonine-protei 100.0 1E-39 3.4E-44 352.2 18.0 270 403-692 10-287 (327)
150 1x8b_A WEE1HU, WEE1-like prote 100.0 1.1E-39 3.6E-44 344.2 17.8 247 419-692 9-279 (289)
151 2yex_A Serine/threonine-protei 100.0 1.6E-39 5.5E-44 341.2 19.0 252 420-692 6-261 (276)
152 1xbb_A Tyrosine-protein kinase 100.0 1E-39 3.5E-44 346.0 17.6 254 420-697 15-277 (291)
153 3mtl_A Cell division protein k 100.0 6.6E-40 2.3E-44 353.2 16.3 271 421-699 2-290 (324)
154 3a7i_A MST3 kinase, serine/thr 100.0 3E-39 1E-43 344.3 21.2 248 420-692 21-270 (303)
155 1vzo_A Ribosomal protein S6 ki 100.0 8.3E-40 2.8E-44 357.0 16.2 254 420-693 53-322 (355)
156 3eqc_A Dual specificity mitoge 100.0 1.5E-39 5E-44 355.7 18.2 264 420-692 32-324 (360)
157 2clq_A Mitogen-activated prote 100.0 4.4E-39 1.5E-43 341.3 21.2 252 422-692 23-278 (295)
158 3f66_A Hepatocyte growth facto 100.0 2.1E-39 7.1E-44 344.6 18.7 256 421-698 25-290 (298)
159 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.1E-39 1.1E-43 368.7 21.4 250 420-687 184-438 (543)
160 3c1x_A Hepatocyte growth facto 100.0 1E-39 3.5E-44 358.4 16.8 255 422-698 90-354 (373)
161 3pls_A Macrophage-stimulating 100.0 3.1E-39 1.1E-43 342.9 20.0 255 422-698 22-286 (298)
162 3ttj_A Mitogen-activated prote 100.0 4.3E-39 1.5E-43 363.5 22.2 259 420-692 61-355 (464)
163 4eut_A Serine/threonine-protei 100.0 1.1E-39 3.8E-44 361.5 17.1 275 420-700 8-310 (396)
164 3bhy_A Death-associated protei 100.0 4.7E-39 1.6E-43 339.1 21.1 251 420-692 4-265 (283)
165 1b6c_B TGF-B superfamily recep 100.0 5.4E-39 1.9E-43 348.2 22.1 267 410-698 31-335 (342)
166 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1E-39 3.5E-44 352.5 15.9 263 419-692 32-318 (329)
167 3sv0_A Casein kinase I-like; t 100.0 1.1E-38 3.6E-43 360.8 24.8 260 420-697 6-276 (483)
168 2rku_A Serine/threonine-protei 100.0 4E-39 1.4E-43 341.8 20.0 248 420-692 14-265 (294)
169 1byg_A CSK, protein (C-termina 100.0 1.1E-39 3.6E-44 343.3 15.2 250 420-697 20-271 (278)
170 3fme_A Dual specificity mitoge 100.0 1.3E-39 4.4E-44 344.5 16.0 254 420-692 6-266 (290)
171 3cok_A Serine/threonine-protei 100.0 1.4E-39 4.8E-44 342.3 16.1 249 420-692 10-262 (278)
172 1t4h_A Serine/threonine-protei 100.0 4.2E-39 1.4E-43 340.9 19.9 248 422-692 27-282 (290)
173 2qr7_A Ribosomal protein S6 ki 100.0 1.5E-39 5E-44 353.0 16.6 252 419-692 20-277 (342)
174 2yfx_A Tyrosine-protein kinase 100.0 2E-39 6.8E-44 349.8 17.5 262 420-700 29-305 (327)
175 2acx_A G protein-coupled recep 100.0 2.9E-39 9.9E-44 369.8 19.8 253 420-692 183-444 (576)
176 2jam_A Calcium/calmodulin-depe 100.0 3E-39 1E-43 344.6 18.6 255 419-696 7-267 (304)
177 4aaa_A Cyclin-dependent kinase 100.0 6.1E-39 2.1E-43 346.6 21.0 265 420-692 24-306 (331)
178 4fl3_A Tyrosine-protein kinase 100.0 2.6E-39 8.8E-44 378.5 19.3 247 427-697 375-629 (635)
179 1nxk_A MAP kinase-activated pr 100.0 4.3E-39 1.5E-43 356.9 20.1 250 421-692 61-321 (400)
180 2jii_A Serine/threonine-protei 100.0 5.6E-40 1.9E-44 357.9 12.7 266 420-702 41-339 (352)
181 2owb_A Serine/threonine-protei 100.0 4.4E-39 1.5E-43 348.4 19.2 248 420-692 40-291 (335)
182 3ll6_A Cyclin G-associated kin 100.0 6.2E-40 2.1E-44 354.4 12.4 262 419-704 26-313 (337)
183 3i6u_A CDS1, serine/threonine- 100.0 6.5E-39 2.2E-43 357.8 20.8 249 418-692 132-399 (419)
184 2vgo_A Serine/threonine-protei 100.0 5.2E-39 1.8E-43 339.2 18.9 245 421-692 14-262 (284)
185 3nsz_A CK II alpha, casein kin 100.0 1.6E-38 5.5E-43 342.8 22.8 255 421-692 36-319 (330)
186 1ua2_A CAK, cell division prot 100.0 3.6E-39 1.2E-43 350.7 17.6 267 417-693 6-292 (346)
187 3mi9_A Cell division protein k 100.0 6.1E-39 2.1E-43 349.5 19.3 266 420-692 16-311 (351)
188 2h6d_A 5'-AMP-activated protei 100.0 1E-38 3.5E-43 335.2 19.5 247 420-692 10-261 (276)
189 2y7j_A Phosphorylase B kinase 100.0 2.1E-38 7.1E-43 347.3 22.7 259 412-692 85-359 (365)
190 3rp9_A Mitogen-activated prote 100.0 1.8E-38 6.2E-43 358.6 22.9 194 420-621 52-280 (458)
191 3g2f_A Bone morphogenetic prot 100.0 4.1E-39 1.4E-43 348.4 16.9 270 420-699 12-318 (336)
192 3an0_A Dual specificity mitoge 100.0 2.4E-39 8.1E-44 351.1 14.9 255 419-692 49-310 (340)
193 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.7E-39 1.6E-43 352.4 17.3 252 419-697 63-337 (365)
194 1u46_A ACK-1, activated CDC42 100.0 1.9E-39 6.5E-44 343.4 13.1 257 420-698 17-283 (291)
195 3eb0_A Putative uncharacterize 100.0 7.7E-39 2.6E-43 353.1 18.3 263 417-692 3-321 (383)
196 2vwi_A Serine/threonine-protei 100.0 2.8E-39 9.6E-44 344.0 14.0 262 419-692 13-287 (303)
197 2j7t_A Serine/threonine-protei 100.0 4.2E-39 1.5E-43 342.7 15.3 253 419-692 17-275 (302)
198 3lij_A Calcium/calmodulin depe 100.0 1.4E-38 4.7E-43 363.0 20.2 250 420-692 36-291 (494)
199 3com_A Serine/threonine-protei 100.0 2.1E-38 7.2E-43 339.4 20.3 251 419-692 27-278 (314)
200 3mwu_A Calmodulin-domain prote 100.0 1.4E-38 4.8E-43 362.2 19.9 251 419-692 20-276 (486)
201 1wak_A Serine/threonine-protei 100.0 2.9E-38 1E-42 349.5 21.8 261 420-692 36-391 (397)
202 1phk_A Phosphorylase kinase; g 100.0 2.5E-38 8.5E-43 336.1 20.3 252 419-692 15-283 (298)
203 1cm8_A Phosphorylated MAP kina 100.0 3.5E-38 1.2E-42 345.6 22.1 264 420-699 24-316 (367)
204 3cek_A Dual specificity protei 100.0 3.9E-39 1.3E-43 345.2 14.1 260 410-692 17-292 (313)
205 3pg1_A Mitogen-activated prote 100.0 1.3E-38 4.6E-43 348.3 18.5 274 412-697 13-323 (362)
206 3n9x_A Phosphotransferase; mal 100.0 3.1E-38 1.1E-42 353.7 21.9 199 420-626 25-253 (432)
207 3q5i_A Protein kinase; CDPK, m 100.0 3.3E-38 1.1E-42 360.7 22.5 247 419-692 34-301 (504)
208 2i6l_A Mitogen-activated prote 100.0 2.1E-38 7.2E-43 339.8 19.6 264 420-692 10-305 (320)
209 2xrw_A Mitogen-activated prote 100.0 3.9E-38 1.3E-42 345.9 22.1 265 420-696 24-324 (371)
210 2x7f_A TRAF2 and NCK-interacti 100.0 4.1E-39 1.4E-43 346.8 14.1 260 411-692 14-286 (326)
211 3byv_A Rhoptry kinase; malaria 100.0 7.2E-40 2.5E-44 360.6 8.2 243 420-692 72-359 (377)
212 2r3i_A Cell division protein k 100.0 3.3E-38 1.1E-42 335.4 20.7 267 421-696 3-289 (299)
213 3qyz_A Mitogen-activated prote 100.0 5.2E-38 1.8E-42 344.0 22.5 267 419-697 25-320 (364)
214 3nyv_A Calmodulin-domain prote 100.0 9.2E-39 3.1E-43 363.7 17.2 251 419-692 24-281 (484)
215 3kvw_A DYRK2, dual specificity 100.0 3.3E-38 1.1E-42 353.0 21.3 201 419-630 95-304 (429)
216 3pfq_A PKC-B, PKC-beta, protei 100.0 1.5E-38 5.1E-43 374.5 19.3 249 419-692 339-597 (674)
217 2ycf_A Serine/threonine-protei 100.0 3.9E-38 1.3E-42 338.9 20.7 252 419-692 8-274 (322)
218 3e3p_A Protein kinase, putativ 100.0 1.2E-38 3.9E-43 348.3 16.7 275 414-697 16-321 (360)
219 2y4i_B KSR2, HKSR2, kinase sup 100.0 4.9E-39 1.7E-43 345.1 13.3 262 419-704 31-307 (319)
220 2wtk_C Serine/threonine-protei 100.0 5.3E-38 1.8E-42 334.7 21.2 256 419-697 3-270 (305)
221 2pml_X PFPK7, Ser/Thr protein 100.0 1.1E-38 3.9E-43 346.7 15.9 258 420-692 30-322 (348)
222 2j0j_A Focal adhesion kinase 1 100.0 2.3E-38 8E-43 371.7 18.9 259 416-697 385-649 (656)
223 4e7w_A Glycogen synthase kinas 100.0 3.1E-38 1E-42 349.5 18.7 266 420-698 39-329 (394)
224 1z57_A Dual specificity protei 100.0 4.2E-38 1.4E-42 340.2 19.0 262 420-692 13-328 (339)
225 2fst_X Mitogen-activated prote 100.0 3.6E-38 1.2E-42 345.4 18.3 263 420-698 28-319 (367)
226 2vx3_A Dual specificity tyrosi 100.0 1.2E-37 4.2E-42 343.4 22.5 211 411-630 44-263 (382)
227 1j1b_A Glycogen synthase kinas 100.0 1.5E-38 5.1E-43 355.0 15.2 259 421-692 54-336 (420)
228 1zy4_A Serine/threonine-protei 100.0 3.6E-38 1.2E-42 335.0 17.2 252 419-692 4-283 (303)
229 3q60_A ROP5B; pseudokinase, tr 100.0 9E-39 3.1E-43 351.0 12.4 253 420-692 61-352 (371)
230 1blx_A Cyclin-dependent kinase 100.0 7.8E-38 2.7E-42 336.7 17.9 263 419-692 9-296 (326)
231 2b9h_A MAP kinase FUS3, mitoge 100.0 1.5E-37 5E-42 338.6 20.2 267 419-697 9-312 (353)
232 3rgf_A Cyclin-dependent kinase 100.0 1.8E-37 6.1E-42 344.8 21.3 266 421-692 20-333 (405)
233 1q8y_A SR protein kinase; tran 100.0 2.8E-37 9.7E-42 338.9 22.6 266 420-697 18-340 (373)
234 2wei_A Calmodulin-domain prote 100.0 1.2E-37 4.1E-42 329.4 18.5 252 418-692 19-276 (287)
235 4exu_A Mitogen-activated prote 100.0 2E-37 6.8E-42 340.3 20.6 257 420-692 41-323 (371)
236 2rio_A Serine/threonine-protei 100.0 1.9E-37 6.4E-42 347.6 19.0 252 422-692 16-295 (434)
237 2iwi_A Serine/threonine-protei 100.0 8E-38 2.7E-42 334.7 14.9 244 416-692 26-283 (312)
238 2eu9_A Dual specificity protei 100.0 7.8E-37 2.7E-41 332.6 22.4 258 420-692 18-333 (355)
239 3aln_A Dual specificity mitoge 100.0 1.8E-37 6.3E-42 334.3 16.6 257 420-692 21-285 (327)
240 3coi_A Mitogen-activated prote 100.0 1.1E-37 3.7E-42 339.9 14.9 256 420-692 23-305 (353)
241 3fhr_A MAP kinase-activated pr 100.0 2.5E-37 8.4E-42 334.8 16.8 258 419-697 26-294 (336)
242 3a99_A Proto-oncogene serine/t 100.0 9.7E-38 3.3E-42 335.6 13.0 243 417-692 39-293 (320)
243 3p23_A Serine/threonine-protei 100.0 7.1E-37 2.4E-41 342.2 17.4 249 420-692 23-283 (432)
244 2dyl_A Dual specificity mitoge 100.0 1E-36 3.6E-41 326.6 17.7 252 420-692 24-283 (318)
245 3qa8_A MGC80376 protein; kinas 100.0 9.6E-37 3.3E-41 352.3 10.3 259 420-689 13-294 (676)
246 3uqc_A Probable conserved tran 100.0 9.2E-36 3.1E-40 314.9 16.0 233 420-700 30-266 (286)
247 2pzi_A Probable serine/threoni 100.0 7.6E-36 2.6E-40 353.4 15.3 238 420-696 79-325 (681)
248 3m2w_A MAP kinase-activated pr 100.0 1.6E-34 5.4E-39 307.4 19.0 233 420-698 16-264 (299)
249 3dzo_A Rhoptry kinase domain; 100.0 1.1E-35 3.9E-40 330.9 9.3 243 420-692 77-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 1.8E-35 6.2E-40 320.1 5.8 237 420-691 19-329 (336)
251 4azs_A Methyltransferase WBDD; 99.9 4.4E-29 1.5E-33 287.7 6.6 185 428-624 241-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 3.1E-26 1.1E-30 262.5 10.0 186 423-626 338-539 (540)
253 3rgz_A Protein brassinosteroid 99.9 2.7E-24 9.3E-29 258.0 16.7 178 2-179 441-690 (768)
254 1ogq_A PGIP-2, polygalacturona 99.9 2.7E-24 9.3E-29 229.9 12.2 177 2-180 75-255 (313)
255 1ogq_A PGIP-2, polygalacturona 99.9 5E-24 1.7E-28 227.9 11.7 178 3-180 50-232 (313)
256 3rgz_A Protein brassinosteroid 99.9 2.8E-23 9.7E-28 249.1 17.7 179 2-180 417-667 (768)
257 4fcg_A Uncharacterized protein 99.9 2.5E-23 8.6E-28 223.9 15.1 172 3-179 81-263 (328)
258 4fcg_A Uncharacterized protein 99.9 4E-23 1.4E-27 222.3 15.2 175 2-180 103-288 (328)
259 1ozn_A Reticulon 4 receptor; N 99.9 2.5E-22 8.6E-27 211.5 16.4 178 2-179 31-211 (285)
260 1ozn_A Reticulon 4 receptor; N 99.9 5.8E-22 2E-26 208.7 17.8 176 2-177 55-233 (285)
261 2o6q_A Variable lymphocyte rec 99.9 1.1E-21 3.7E-26 205.1 19.5 176 3-178 37-214 (270)
262 1zar_A RIO2 kinase; serine kin 99.9 4.3E-23 1.5E-27 216.9 8.6 151 415-598 84-252 (282)
263 3m19_A Variable lymphocyte rec 99.9 1.4E-21 4.8E-26 201.9 18.2 173 4-179 15-189 (251)
264 3m19_A Variable lymphocyte rec 99.9 3.2E-21 1.1E-25 199.2 18.1 160 3-162 35-196 (251)
265 3rfs_A Internalin B, repeat mo 99.9 3.2E-21 1.1E-25 201.7 18.0 174 2-179 40-215 (272)
266 2z66_A Variable lymphocyte rec 99.9 1.4E-21 4.9E-26 207.9 14.1 177 2-179 51-233 (306)
267 2z62_A TOLL-like receptor 4, v 99.9 1.8E-21 6E-26 204.0 13.7 177 3-180 28-211 (276)
268 4eco_A Uncharacterized protein 99.8 8.3E-22 2.9E-26 231.2 10.2 163 14-180 194-388 (636)
269 1p9a_G Platelet glycoprotein I 99.8 8.1E-21 2.8E-25 200.6 16.6 172 2-179 9-182 (290)
270 2o6s_A Variable lymphocyte rec 99.8 6.3E-21 2.2E-25 191.0 14.9 163 2-169 27-189 (208)
271 3rfs_A Internalin B, repeat mo 99.8 1.2E-20 4.2E-25 197.3 17.5 159 2-162 62-222 (272)
272 2z62_A TOLL-like receptor 4, v 99.8 9E-21 3.1E-25 198.6 16.3 163 7-172 11-176 (276)
273 1wwl_A Monocyte differentiatio 99.8 1.5E-21 5.1E-26 208.5 10.4 174 2-179 94-284 (312)
274 2z66_A Variable lymphocyte rec 99.8 2.4E-21 8.3E-26 206.1 11.8 177 2-180 27-210 (306)
275 2o6q_A Variable lymphocyte rec 99.8 2.8E-20 9.6E-25 194.3 18.7 173 4-179 17-191 (270)
276 4eco_A Uncharacterized protein 99.8 1E-21 3.5E-26 230.5 8.3 173 4-179 82-363 (636)
277 3zyi_A Leucine-rich repeat-con 99.8 1.7E-20 5.7E-25 211.1 17.0 176 3-179 75-252 (452)
278 1p9a_G Platelet glycoprotein I 99.8 2.3E-20 7.9E-25 197.1 17.0 172 2-178 30-204 (290)
279 3zyj_A Leucine-rich repeat-con 99.8 1.4E-20 4.8E-25 211.0 16.2 176 2-179 87-265 (440)
280 3zyi_A Leucine-rich repeat-con 99.8 1.6E-20 5.3E-25 211.4 16.5 177 1-179 97-276 (452)
281 3v47_A TOLL-like receptor 5B a 99.8 1.4E-20 4.8E-25 211.7 16.1 178 2-179 102-381 (455)
282 2id5_A Lingo-1, leucine rich r 99.8 1.3E-20 4.4E-25 213.5 15.7 179 2-180 31-211 (477)
283 1wwl_A Monocyte differentiatio 99.8 2.3E-21 8E-26 207.0 8.9 174 2-179 120-306 (312)
284 3v47_A TOLL-like receptor 5B a 99.8 1.2E-20 4.1E-25 212.3 15.0 178 2-179 53-333 (455)
285 3zyj_A Leucine-rich repeat-con 99.8 2.7E-20 9.2E-25 208.7 17.0 178 2-180 63-242 (440)
286 2v70_A SLIT-2, SLIT homolog 2 99.8 2.8E-20 9.5E-25 188.2 14.9 154 6-162 14-170 (220)
287 2xwt_C Thyrotropin receptor; s 99.8 1.2E-20 4E-25 193.4 11.4 174 3-179 31-215 (239)
288 4ecn_A Leucine-rich repeat pro 99.8 5.5E-21 1.9E-25 229.1 10.0 158 19-180 440-630 (876)
289 4ecn_A Leucine-rich repeat pro 99.8 4E-21 1.4E-25 230.2 8.4 176 3-181 323-607 (876)
290 1xku_A Decorin; proteoglycan, 99.8 7.8E-20 2.7E-24 196.7 16.9 174 3-180 52-227 (330)
291 4glp_A Monocyte differentiatio 99.8 1.2E-20 4.2E-25 201.2 9.6 174 3-180 91-283 (310)
292 2v9t_B SLIT homolog 2 protein 99.8 8.1E-20 2.8E-24 184.7 15.1 152 6-160 14-167 (220)
293 3e6j_A Variable lymphocyte rec 99.8 1.2E-19 4.3E-24 184.6 16.4 154 5-162 21-176 (229)
294 3t6q_A CD180 antigen; protein- 99.8 6.2E-20 2.1E-24 214.2 16.0 177 2-179 349-533 (606)
295 2z80_A TOLL-like receptor 2, v 99.8 1.5E-20 5.1E-25 204.4 9.5 174 4-178 53-231 (353)
296 3oja_B Anopheles plasmodium-re 99.8 1.2E-19 4.2E-24 211.3 17.6 112 2-113 74-185 (597)
297 3oja_A Leucine-rich immune mol 99.8 1.2E-20 4E-25 214.1 8.8 173 3-178 34-223 (487)
298 3vq2_A TLR4, TOLL-like recepto 99.8 4.6E-20 1.6E-24 215.3 13.9 178 2-180 349-532 (606)
299 1xku_A Decorin; proteoglycan, 99.8 1.1E-19 3.9E-24 195.4 15.8 173 2-180 75-251 (330)
300 2ft3_A Biglycan; proteoglycan, 99.8 9.6E-20 3.3E-24 196.2 14.9 175 3-180 54-252 (332)
301 2ft3_A Biglycan; proteoglycan, 99.8 1.3E-19 4.4E-24 195.2 15.5 166 4-178 34-202 (332)
302 3oja_B Anopheles plasmodium-re 99.8 1.1E-19 3.8E-24 211.7 16.1 175 2-179 98-311 (597)
303 3o6n_A APL1; leucine-rich repe 99.8 2.5E-19 8.6E-24 197.4 18.1 111 2-112 68-178 (390)
304 3vq2_A TLR4, TOLL-like recepto 99.8 1.2E-19 3.9E-24 211.9 16.2 177 3-180 32-215 (606)
305 4glp_A Monocyte differentiatio 99.8 2.4E-20 8E-25 199.0 8.9 172 2-177 116-302 (310)
306 2id5_A Lingo-1, leucine rich r 99.8 9.1E-20 3.1E-24 206.5 13.3 177 2-178 55-233 (477)
307 2z80_A TOLL-like receptor 2, v 99.8 1.9E-20 6.6E-25 203.5 7.4 171 5-180 33-209 (353)
308 1ziw_A TOLL-like receptor 3; i 99.8 2.1E-19 7.3E-24 212.7 16.9 176 3-178 25-204 (680)
309 3o6n_A APL1; leucine-rich repe 99.8 2.5E-19 8.7E-24 197.4 16.0 174 2-179 92-305 (390)
310 3t6q_A CD180 antigen; protein- 99.8 2E-19 6.7E-24 210.0 15.7 179 2-180 324-511 (606)
311 3j0a_A TOLL-like receptor 5; m 99.8 2.5E-19 8.4E-24 217.2 16.4 178 2-179 23-214 (844)
312 2xot_A Amphoterin-induced prot 99.8 1.9E-19 6.4E-24 196.4 13.7 168 6-177 21-197 (361)
313 2v70_A SLIT-2, SLIT homolog 2 99.8 2.5E-19 8.5E-24 181.2 13.2 139 3-141 32-171 (220)
314 1h6u_A Internalin H; cell adhe 99.8 4.5E-19 1.5E-23 188.9 15.5 165 2-179 40-205 (308)
315 1w8a_A SLIT protein; signaling 99.8 3.5E-19 1.2E-23 176.0 13.3 158 6-166 11-170 (192)
316 2v9t_B SLIT homolog 2 protein 99.8 5.8E-19 2E-23 178.4 14.8 138 3-140 32-169 (220)
317 2o6s_A Variable lymphocyte rec 99.8 1.5E-18 5.1E-23 173.7 17.2 154 6-162 10-165 (208)
318 4ezg_A Putative uncharacterize 99.8 3.8E-19 1.3E-23 176.5 12.6 151 2-159 43-195 (197)
319 2xwt_C Thyrotropin receptor; s 99.8 3.7E-19 1.3E-23 182.2 12.6 171 2-178 54-235 (239)
320 2z63_A TOLL-like receptor 4, v 99.8 6E-19 2.1E-23 204.1 15.8 177 3-180 28-211 (570)
321 2xot_A Amphoterin-induced prot 99.8 6.7E-19 2.3E-23 191.9 14.9 157 2-160 38-204 (361)
322 2z63_A TOLL-like receptor 4, v 99.8 2.1E-19 7E-24 208.0 11.4 176 2-178 346-527 (570)
323 3a79_B TLR6, VLRB.59, TOLL-lik 99.8 5.1E-19 1.7E-23 204.7 14.6 172 3-177 276-481 (562)
324 3e6j_A Variable lymphocyte rec 99.8 1.5E-18 5.2E-23 176.5 16.3 138 2-140 39-176 (229)
325 3oja_A Leucine-rich immune mol 99.8 2.2E-19 7.4E-24 203.7 11.2 172 2-179 57-247 (487)
326 4g8a_A TOLL-like receptor 4; l 99.8 5.5E-19 1.9E-23 206.8 14.6 162 4-165 53-221 (635)
327 2z7x_B TOLL-like receptor 1, v 99.8 6.2E-19 2.1E-23 201.8 14.6 174 3-179 247-454 (520)
328 3o53_A Protein LRIM1, AGAP0063 99.8 1.2E-19 4.2E-24 194.1 8.1 174 2-179 33-224 (317)
329 2z81_A CD282 antigen, TOLL-lik 99.8 1.1E-19 3.6E-24 209.6 7.9 169 8-179 10-182 (549)
330 1h6u_A Internalin H; cell adhe 99.8 1.5E-18 5.2E-23 184.8 15.4 166 2-179 62-227 (308)
331 1h6t_A Internalin B; cell adhe 99.8 1.5E-18 5.2E-23 183.2 13.8 166 2-179 45-210 (291)
332 1ziw_A TOLL-like receptor 3; i 99.8 2.2E-18 7.6E-23 203.9 16.7 177 2-179 404-594 (680)
333 1zth_A RIO1 serine protein kin 99.8 3.2E-19 1.1E-23 184.9 8.1 136 423-574 49-219 (258)
334 3o53_A Protein LRIM1, AGAP0063 99.8 1.1E-18 3.6E-23 186.8 11.4 172 2-179 57-247 (317)
335 3j0a_A TOLL-like receptor 5; m 99.8 2.1E-18 7.2E-23 209.0 14.8 118 2-119 47-168 (844)
336 4g8a_A TOLL-like receptor 4; l 99.8 2.8E-18 9.5E-23 200.8 14.7 164 7-173 35-201 (635)
337 2z7x_B TOLL-like receptor 1, v 99.8 2.7E-18 9.2E-23 196.5 13.9 172 3-179 302-478 (520)
338 2z81_A CD282 antigen, TOLL-lik 99.8 1.8E-18 6E-23 199.4 11.7 179 2-180 25-207 (549)
339 3a79_B TLR6, VLRB.59, TOLL-lik 99.8 3.2E-18 1.1E-22 197.9 13.9 172 3-179 331-507 (562)
340 1m9s_A Internalin B; cell inva 99.7 4.8E-18 1.6E-22 196.8 15.1 166 2-179 42-207 (605)
341 4fmz_A Internalin; leucine ric 99.7 1.1E-17 3.6E-22 181.2 16.4 168 2-180 154-322 (347)
342 3cvr_A Invasion plasmid antige 99.7 9.6E-18 3.3E-22 192.3 16.5 138 4-163 60-197 (571)
343 1h6t_A Internalin B; cell adhe 99.7 7.3E-18 2.5E-22 178.0 14.0 150 2-162 67-217 (291)
344 1xeu_A Internalin C; cellular 99.7 1.2E-17 3.9E-22 173.7 13.0 146 3-160 41-187 (263)
345 1xeu_A Internalin C; cellular 99.7 2.5E-18 8.4E-23 178.8 7.6 163 3-179 19-182 (263)
346 2wfh_A SLIT homolog 2 protein 99.7 2.6E-17 8.8E-22 162.7 14.2 131 6-140 13-143 (193)
347 1m9s_A Internalin B; cell inva 99.7 1.9E-17 6.5E-22 191.8 14.8 157 2-169 64-221 (605)
348 2ell_A Acidic leucine-rich nuc 99.7 7.5E-18 2.6E-22 162.5 9.4 131 26-159 23-161 (168)
349 4b8c_D Glucose-repressible alc 99.7 3.4E-18 1.2E-22 202.8 8.0 158 5-166 193-362 (727)
350 1dce_A Protein (RAB geranylger 99.7 2.9E-19 9.8E-24 205.8 -1.2 168 2-175 348-566 (567)
351 1o6v_A Internalin A; bacterial 99.7 3.8E-17 1.3E-21 184.4 15.6 166 2-179 198-363 (466)
352 4fmz_A Internalin; leucine ric 99.7 5E-17 1.7E-21 175.8 16.0 167 2-180 131-298 (347)
353 3cvr_A Invasion plasmid antige 99.7 1.5E-17 5.2E-22 190.6 12.2 155 2-179 79-240 (571)
354 3bz5_A Internalin-J, INLJ; leu 99.7 6.2E-17 2.1E-21 181.9 16.9 161 2-179 41-201 (457)
355 1o6v_A Internalin A; bacterial 99.7 5.7E-17 2E-21 182.9 16.4 166 2-179 176-341 (466)
356 4ezg_A Putative uncharacterize 99.7 2.2E-17 7.4E-22 163.8 10.7 150 23-179 40-191 (197)
357 3bz5_A Internalin-J, INLJ; leu 99.7 1.1E-16 3.8E-21 179.9 17.6 160 2-179 63-222 (457)
358 1w8a_A SLIT protein; signaling 99.7 3.7E-17 1.3E-21 161.5 12.0 130 30-162 11-143 (192)
359 2o6r_A Variable lymphocyte rec 99.7 9.5E-17 3.3E-21 156.2 14.4 133 5-140 9-141 (177)
360 4b8c_D Glucose-repressible alc 99.7 1.8E-18 6.2E-23 205.2 2.6 146 2-155 223-369 (727)
361 2ast_B S-phase kinase-associat 99.7 3.8E-18 1.3E-22 183.7 4.2 177 3-180 70-258 (336)
362 2ast_B S-phase kinase-associat 99.7 2.6E-18 8.9E-23 185.0 2.8 178 2-179 92-282 (336)
363 2ca6_A RAN GTPase-activating p 99.7 8.9E-19 3E-23 192.8 -1.3 178 2-179 59-284 (386)
364 2ell_A Acidic leucine-rich nuc 99.7 1.1E-16 3.9E-21 154.1 12.8 136 2-141 23-164 (168)
365 1jl5_A Outer protein YOPM; leu 99.7 1.8E-17 6.3E-22 186.0 7.4 166 2-179 10-205 (454)
366 2ca6_A RAN GTPase-activating p 99.7 2.8E-18 9.4E-23 188.8 0.6 180 2-181 31-256 (386)
367 2je0_A Acidic leucine-rich nuc 99.7 2.4E-17 8.2E-22 155.6 6.9 127 26-154 16-149 (149)
368 2je0_A Acidic leucine-rich nuc 99.7 1.4E-16 4.7E-21 150.3 10.9 128 3-132 17-149 (149)
369 4ay9_X Follicle-stimulating ho 99.7 1.1E-16 3.8E-21 173.5 11.5 176 2-179 29-212 (350)
370 3g06_A SSPH2 (leucine-rich rep 99.7 5.9E-16 2E-20 179.6 16.8 158 2-179 80-271 (622)
371 3goz_A Leucine-rich repeat-con 99.7 2.8E-17 9.7E-22 179.1 5.3 177 3-179 22-235 (362)
372 1jl5_A Outer protein YOPM; leu 99.6 1.5E-15 5.2E-20 170.4 16.8 120 27-159 131-251 (454)
373 3goz_A Leucine-rich repeat-con 99.6 6.5E-17 2.2E-21 176.3 4.6 174 7-180 2-207 (362)
374 4ay9_X Follicle-stimulating ho 99.6 6.5E-16 2.2E-20 167.5 12.4 173 2-176 53-233 (350)
375 2o6r_A Variable lymphocyte rec 99.6 1.5E-15 5E-20 147.7 13.2 131 28-162 8-141 (177)
376 2wfh_A SLIT homolog 2 protein 99.6 1.1E-15 3.9E-20 150.9 12.6 127 29-160 12-141 (193)
377 1a9n_A U2A', U2A'; complex (nu 99.6 2.7E-16 9.2E-21 152.9 7.1 132 22-159 14-154 (176)
378 4gyi_A RIO2 kinase; protein ki 99.6 4.5E-16 1.6E-20 168.0 8.9 138 422-574 96-265 (397)
379 3g06_A SSPH2 (leucine-rich rep 99.6 4E-15 1.4E-19 172.6 17.3 155 3-179 61-251 (622)
380 1a9n_A U2A', U2A'; complex (nu 99.6 2.1E-15 7.3E-20 146.5 10.9 129 2-136 18-153 (176)
381 1ds9_A Outer arm dynein; leuci 99.6 1.5E-17 5.2E-22 165.0 -6.4 132 3-140 18-157 (198)
382 3g39_A Variable lymphocyte rec 99.6 1.8E-14 6.3E-19 139.0 12.4 109 29-140 11-119 (170)
383 1z7x_W Ribonuclease inhibitor; 99.5 2.9E-16 9.8E-21 176.7 -1.8 178 2-179 169-380 (461)
384 2r9u_A Variable lymphocyte rec 99.5 3.2E-14 1.1E-18 137.9 12.8 107 29-138 14-120 (174)
385 1dce_A Protein (RAB geranylger 99.5 1.6E-14 5.6E-19 166.1 12.5 136 6-152 426-567 (567)
386 1ds9_A Outer arm dynein; leuci 99.5 6.3E-17 2.2E-21 160.6 -7.3 147 23-175 14-180 (198)
387 3g39_A Variable lymphocyte rec 99.5 3.7E-14 1.3E-18 136.9 12.4 106 5-113 11-116 (170)
388 1z7x_W Ribonuclease inhibitor; 99.5 4.4E-16 1.5E-20 175.1 -2.3 179 2-180 198-409 (461)
389 2r9u_A Variable lymphocyte rec 99.5 1.1E-13 3.6E-18 134.2 12.8 104 6-112 15-118 (174)
390 2ifg_A High affinity nerve gro 99.4 6.5E-13 2.2E-17 143.5 12.0 130 31-163 12-146 (347)
391 3sb4_A Hypothetical leucine ri 99.4 5.8E-13 2E-17 142.9 10.9 173 2-178 48-306 (329)
392 2ifg_A High affinity nerve gro 99.4 1.4E-12 4.8E-17 140.8 10.3 105 6-113 11-117 (347)
393 3tm0_A Aminoglycoside 3'-phosp 99.3 5.4E-12 1.8E-16 130.5 11.8 147 416-572 9-212 (263)
394 3un9_A NLR family member X1; l 99.3 4.7E-14 1.6E-18 153.8 -5.9 166 2-167 71-261 (372)
395 3ogk_B Coronatine-insensitive 99.2 2.7E-12 9.3E-17 148.9 1.1 172 4-177 139-326 (592)
396 1nd4_A Aminoglycoside 3'-phosp 99.1 2.4E-11 8.3E-16 125.1 6.3 136 422-572 21-213 (264)
397 3ogk_B Coronatine-insensitive 99.1 2.4E-11 8.4E-16 140.8 2.8 174 2-177 163-350 (592)
398 3un9_A NLR family member X1; l 99.1 5E-12 1.7E-16 137.8 -3.6 139 3-141 101-257 (372)
399 3sb4_A Hypothetical leucine ri 99.1 4E-10 1.4E-14 120.6 11.0 168 2-175 100-327 (329)
400 2p1m_B Transport inhibitor res 99.0 4.2E-11 1.4E-15 138.9 1.1 62 4-65 106-170 (594)
401 2p1m_B Transport inhibitor res 99.0 3.3E-11 1.1E-15 139.7 -1.4 178 2-181 313-518 (594)
402 3sg8_A APH(2'')-ID; antibiotic 99.0 2.2E-10 7.5E-15 121.2 4.2 183 426-625 25-287 (304)
403 3dxp_A Putative acyl-COA dehyd 99.0 9.7E-10 3.3E-14 119.1 9.2 142 426-574 43-249 (359)
404 4fdw_A Leucine rich hypothetic 99.0 2.5E-09 8.5E-14 117.5 12.2 167 4-178 158-332 (401)
405 2ra8_A Uncharacterized protein 98.8 2.2E-09 7.5E-14 116.0 6.2 174 3-179 107-317 (362)
406 4fdw_A Leucine rich hypothetic 98.8 2.5E-08 8.6E-13 109.5 12.4 164 4-177 136-308 (401)
407 2ra8_A Uncharacterized protein 98.7 4.2E-09 1.4E-13 113.8 4.4 157 2-161 138-323 (362)
408 3r70_A Aminoglycoside phosphot 98.7 1.4E-07 4.6E-12 100.4 13.7 184 422-622 38-295 (320)
409 3rw6_A Nuclear RNA export fact 98.5 2.1E-08 7E-13 103.0 2.1 104 23-129 137-257 (267)
410 3d1u_A Putative fructosamine-3 98.5 2.2E-07 7.4E-12 97.2 9.1 142 425-572 19-215 (288)
411 3rw6_A Nuclear RNA export fact 98.5 1.3E-08 4.5E-13 104.5 -0.3 118 32-151 121-257 (267)
412 3ovc_A Hygromycin-B 4-O-kinase 98.5 5.4E-07 1.8E-11 97.5 11.6 145 425-575 45-245 (362)
413 3tdw_A Gentamicin resistance p 98.4 8.5E-07 2.9E-11 93.6 11.8 138 426-575 24-226 (306)
414 4gkh_A Aminoglycoside 3'-phosp 98.4 1E-06 3.5E-11 91.0 11.3 135 428-573 31-223 (272)
415 1io0_A Tropomodulin; LRR prote 98.4 6E-08 2.1E-12 94.4 1.3 116 21-136 30-164 (185)
416 1io0_A Tropomodulin; LRR prote 98.4 3.5E-08 1.2E-12 96.2 -0.8 118 42-159 27-165 (185)
417 3ats_A Putative uncharacterize 98.2 1.1E-06 3.7E-11 94.8 4.8 80 426-505 25-121 (357)
418 2q83_A YTAA protein; 2635576, 97.9 2.8E-05 9.6E-10 82.8 10.0 141 427-572 38-251 (346)
419 2olc_A MTR kinase, methylthior 97.9 2.8E-05 9.4E-10 85.1 10.0 75 426-502 35-120 (397)
420 3jr1_A Putative fructosamine-3 97.8 9.4E-05 3.2E-09 77.8 11.6 139 426-569 41-232 (312)
421 2pyw_A Uncharacterized protein 97.8 1.8E-05 6.1E-10 87.4 6.0 80 542-622 231-313 (420)
422 3f7w_A Putative fructosamine-3 97.7 4.2E-05 1.4E-09 79.7 7.9 78 422-503 16-96 (288)
423 2jwp_A Malectin, MGC80075; sug 97.7 0.00012 4.1E-09 70.0 10.1 76 270-346 90-168 (174)
424 4fs7_A Uncharacterized protein 97.6 0.00017 5.7E-09 78.7 10.7 167 2-177 161-351 (394)
425 4h09_A Hypothetical leucine ri 97.5 0.00066 2.3E-08 73.4 13.6 126 23-153 213-341 (379)
426 4gt6_A Cell surface protein; l 97.5 0.00023 7.8E-09 77.7 9.3 131 20-157 258-390 (394)
427 4fs7_A Uncharacterized protein 97.5 0.0005 1.7E-08 74.9 11.8 164 3-177 208-374 (394)
428 2ppq_A HSK, HK, homoserine kin 97.4 0.00066 2.3E-08 71.5 12.0 160 410-572 6-216 (322)
429 4gt6_A Cell surface protein; l 97.4 0.00056 1.9E-08 74.5 11.4 142 27-177 242-386 (394)
430 3e4g_A ATP synthase subunit S, 97.4 2.8E-05 9.7E-10 74.1 0.8 95 18-112 52-153 (176)
431 1zyl_A Hypothetical protein YI 97.4 0.0017 5.9E-08 68.5 14.5 160 410-573 10-223 (328)
432 3e4g_A ATP synthase subunit S, 97.4 3.8E-05 1.3E-09 73.2 1.4 94 43-136 53-153 (176)
433 4h09_A Hypothetical leucine ri 97.3 0.00065 2.2E-08 73.5 10.5 129 3-136 217-345 (379)
434 3csv_A Aminoglycoside phosphot 97.2 0.0011 3.7E-08 70.4 10.9 143 427-574 24-218 (333)
435 1nw1_A Choline kinase (49.2 KD 97.2 0.00064 2.2E-08 74.9 8.3 72 426-503 78-158 (429)
436 3dxq_A Choline/ethanolamine ki 97.1 0.00068 2.3E-08 70.9 7.8 140 426-574 23-203 (301)
437 3feg_A Choline/ethanolamine ki 97.0 0.0016 5.6E-08 70.2 8.9 142 426-572 55-253 (379)
438 2qg7_A Ethanolamine kinase PV0 96.9 0.0038 1.3E-07 69.2 11.4 74 426-504 113-188 (458)
439 3rfe_A Platelet glycoprotein I 96.8 0.0016 5.5E-08 58.8 6.5 37 76-112 32-68 (130)
440 3rfe_A Platelet glycoprotein I 96.7 0.0019 6.5E-08 58.4 6.2 56 79-136 12-68 (130)
441 3i1a_A Spectinomycin phosphotr 96.7 0.0042 1.4E-07 66.0 9.6 33 542-574 205-237 (339)
442 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00044 1.5E-08 67.1 1.5 113 24-136 38-170 (197)
443 3c5i_A Choline kinase; choline 96.6 0.0021 7.2E-08 69.2 6.6 72 427-503 39-120 (369)
444 1pgv_A TMD-1, tropomodulin TMD 96.6 0.00048 1.6E-08 66.8 1.3 116 43-158 33-170 (197)
445 3f2s_A CK, chetk-alpha, cholin 96.4 0.007 2.4E-07 65.6 8.9 142 427-572 58-279 (401)
446 2yle_A Protein spire homolog 1 96.3 0.017 5.8E-07 56.3 9.9 103 502-624 33-135 (229)
447 3mes_A Choline kinase; malaria 94.8 0.026 8.9E-07 61.7 5.6 142 426-573 75-291 (424)
448 3g15_A CK, chetk-alpha, cholin 91.3 0.47 1.6E-05 51.3 8.9 30 544-573 245-280 (401)
449 2k1k_A Ephrin type-A receptor 87.8 0.31 1.1E-05 33.1 2.4 18 360-377 6-23 (38)
450 4ann_A ESSB; membrane protein, 87.2 1.6 5.5E-05 42.4 8.1 115 475-626 43-158 (215)
451 4ano_A ESSB; membrane protein, 84.7 1.9 6.5E-05 42.0 7.2 113 475-625 48-162 (219)
452 2ks1_B Epidermal growth factor 78.1 1.6 5.4E-05 30.6 2.8 9 383-391 31-39 (44)
453 2jwa_A Receptor tyrosine-prote 76.7 1.3 4.6E-05 30.9 2.1 24 367-390 14-38 (44)
454 3cxl_A N-chimerin; SH2, RHO-GA 74.9 0.42 1.4E-05 52.8 -1.3 62 424-488 145-215 (463)
455 2l2t_A Receptor tyrosine-prote 74.5 1.8 6.1E-05 30.3 2.3 9 383-391 30-38 (44)
456 2k9y_A Ephrin type-A receptor 65.6 5.3 0.00018 27.4 3.2 9 367-375 16-24 (41)
457 2k1k_A Ephrin type-A receptor 50.2 6.1 0.00021 26.7 1.3 23 359-381 9-31 (38)
458 2l8s_A Integrin alpha-1; trans 48.9 11 0.00036 27.6 2.4 22 364-385 9-30 (54)
459 2lz0_A Uncharacterized protein 41.8 53 0.0018 27.3 6.2 39 44-83 13-51 (100)
460 2knc_A Integrin alpha-IIB; tra 40.6 14 0.00049 27.0 2.1 23 363-385 11-33 (54)
461 2l34_A TYRO protein tyrosine k 39.7 17 0.00058 23.7 2.1 26 363-388 5-31 (33)
462 2ks1_B Epidermal growth factor 39.5 34 0.0012 23.9 3.7 19 378-396 23-41 (44)
463 2k1a_A Integrin alpha-IIB; sin 39.3 27 0.00091 24.2 3.1 24 363-386 9-32 (42)
464 1cja_A Protein (actin-fragmin 36.6 1E+02 0.0035 31.8 8.5 137 427-574 75-238 (342)
465 1iij_A ERBB-2 receptor protein 35.7 7.5 0.00026 25.7 -0.1 6 384-389 28-33 (35)
466 2jwa_A Receptor tyrosine-prote 35.0 21 0.00071 24.9 2.0 23 365-387 16-38 (44)
467 2l2t_A Receptor tyrosine-prote 34.0 27 0.00094 24.3 2.5 19 378-396 22-40 (44)
468 2lz0_A Uncharacterized protein 27.7 70 0.0024 26.5 4.7 38 94-132 15-52 (100)
469 1zza_A Stannin, AG8_1; helix, 20.0 64 0.0022 24.8 2.5 11 379-389 29-39 (90)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=5e-54 Score=455.22 Aligned_cols=259 Identities=27% Similarity=0.457 Sum_probs=214.2
Q ss_pred cCCCCCCccccCCceeEEEEEcC------CCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHMA------DGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLL 494 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 494 (771)
++|.+.++||+|+||+||+|.+. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46778899999999999999653 478899999988777778899999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcCCC---------ccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEE
Q 004155 495 IYEYMENNSLARALFGPE---------AHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKI 565 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 565 (771)
|||||++|+|.++|+... .....++|.++++|+.|||.||+|||++ +||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEE
Confidence 999999999999996432 2345799999999999999999999998 8999999999999999999999
Q ss_pred EeecCccccCCCCcc-cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHH
Q 004155 566 SDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALIL 643 (771)
Q Consensus 566 ~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 643 (771)
+|||+|+........ ......||+.|||||++.+..++.++|||||||++|||+| |+.||......+... ..
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~---~i--- 243 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIE---CI--- 243 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH---HH---
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH---HH---
Confidence 999999866543322 2334569999999999999999999999999999999999 899997654332211 11
Q ss_pred HhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 004155 644 KAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRA 698 (771)
Q Consensus 644 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 698 (771)
..+. ....+...+.++.+++.+||+.||++||||+||+++|+++.
T Consensus 244 -~~~~---------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 244 -TQGR---------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp -HHTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -HcCC---------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1111 11223334556889999999999999999999999998754
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.8e-53 Score=457.09 Aligned_cols=261 Identities=27% Similarity=0.422 Sum_probs=209.3
Q ss_pred cCCCCCCccccCCceeEEEEEcC------CCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHMA------DGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLL 494 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 494 (771)
++|.+.++||+|+||.||+|.+. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 35667789999999999999753 478999999988777778899999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcCCCc-----------cCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCe
Q 004155 495 IYEYMENNSLARALFGPEA-----------HRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNP 563 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 563 (771)
|||||++|+|.++++.... ...+++|.++++|+.|||.||+|||+. +||||||||+||||++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcE
Confidence 9999999999999965432 234699999999999999999999998 89999999999999999999
Q ss_pred EEEeecCccccCCCCc-ccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHH
Q 004155 564 KISDFGLAKLDEEDNT-HISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWAL 641 (771)
Q Consensus 564 kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~ 641 (771)
||+|||+|+....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||......+... .+
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~---~i- 273 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID---CI- 273 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHH---HH-
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHH---HH-
Confidence 9999999986654332 23345679999999999999999999999999999999999 899997654322211 11
Q ss_pred HHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 642 ILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 642 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
..+ .....+...+.++.+++.+||+.||++||||+||+++|+.+.+.
T Consensus 274 ---~~g---------~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 274 ---TQG---------RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp ---HHT---------CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred ---HcC---------CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 111 11122333445688999999999999999999999999886544
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.6e-53 Score=450.53 Aligned_cols=258 Identities=28% Similarity=0.417 Sum_probs=211.8
Q ss_pred CCCCCCccccCCceeEEEEEc------CCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEE
Q 004155 422 NFAPDNKIGEGGFGPVYKGHM------ADGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLL 494 (771)
Q Consensus 422 ~f~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 494 (771)
++++.++||+|+||+||+|.+ .+++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 345678999999999999975 356899999997643 3346789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcCCCc------------cCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCC
Q 004155 495 IYEYMENNSLARALFGPEA------------HRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN 562 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 562 (771)
|||||++|+|.++|+.... ....++|.++++|+.|||+||+|||++ +||||||||+||||++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 9999999999999965321 134699999999999999999999998 8999999999999999999
Q ss_pred eEEEeecCccccCCCC-cccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHH
Q 004155 563 PKISDFGLAKLDEEDN-THISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWA 640 (771)
Q Consensus 563 ~kl~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~ 640 (771)
+||+|||+|+...... ........||+.|||||++.++.++.++|||||||++|||+| |+.||......+.. ..
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~---~~- 259 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV---EM- 259 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHH---HH-
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHH---HH-
Confidence 9999999998664432 223345679999999999999999999999999999999999 89999765433221 11
Q ss_pred HHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 004155 641 LILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRA 698 (771)
Q Consensus 641 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 698 (771)
+........+...+..+.+++.+||+.||++||||+||++.|+...
T Consensus 260 ------------i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 260 ------------IRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp ------------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred ------------HHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 1111112223344567889999999999999999999999998754
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.7e-52 Score=440.27 Aligned_cols=257 Identities=28% Similarity=0.444 Sum_probs=202.1
Q ss_pred cCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEe
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEY 498 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 498 (771)
+++.+.++||+|+||+||+|.+. ..||||+++.. .....+.|.+|+.++++++|||||+++|+|.+ +..+|||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 45677899999999999999875 36999998753 34456789999999999999999999998864 568999999
Q ss_pred ccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCC
Q 004155 499 MENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 578 (771)
Q Consensus 499 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~ 578 (771)
|++|+|.++|+.. ...++|.++++|+.|||.||+|||++ +||||||||+||||++++.+||+|||+|+......
T Consensus 113 ~~gGsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 186 (307)
T 3omv_A 113 CEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp CSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred CCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence 9999999999543 24699999999999999999999998 89999999999999999999999999998765432
Q ss_pred -cccccccccCCCccchhhhcc---CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhh
Q 004155 579 -THISTRVAGTFGYMAPEYAMR---GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVD 654 (771)
Q Consensus 579 -~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 654 (771)
........||+.|||||++.+ +.++.++|||||||++|||+||+.||.......... .....+. ..
T Consensus 187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~------~~~~~~~----~~ 256 (307)
T 3omv_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII------FMVGRGY----AS 256 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH------HHHHTTC----CC
T ss_pred cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHH------HHHhcCC----CC
Confidence 223345689999999999964 468999999999999999999999997544322111 0111110 01
Q ss_pred hhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 655 KRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 655 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
+.+ ...+...+..+.+++.+||+.||++||||.||++.|+.+
T Consensus 257 p~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l 298 (307)
T 3omv_A 257 PDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp CCS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred CCc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 111 112233455688999999999999999999999988764
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.9e-51 Score=440.29 Aligned_cols=250 Identities=22% Similarity=0.387 Sum_probs=202.4
Q ss_pred cCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 497 (771)
++|++.++||+|+||+||+|. ..+|+.||||++... .....+.+.+|+.++++++|||||++++++.+++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 689999999999999999994 567999999999754 33446789999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCC
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 577 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~ 577 (771)
||+||+|.++|.... ...+++.+++.|+.||+.||+|||++ +|+||||||+||||+.++.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~--~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQK--GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHHcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 999999999995322 34678999999999999999999998 8999999999999999999999999999876432
Q ss_pred CcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhc
Q 004155 578 NTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRL 657 (771)
Q Consensus 578 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 657 (771)
. ......+||+.|||||++.+..++.++|||||||++|||+||++||......+... .+.....
T Consensus 179 ~-~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~---------------~i~~~~~ 242 (350)
T 4b9d_A 179 V-ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVL---------------KIISGSF 242 (350)
T ss_dssp H-HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH---------------HHHHTCC
T ss_pred c-ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH---------------HHHcCCC
Confidence 2 12334679999999999999999999999999999999999999997654322211 1111111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 658 GSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 658 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
...+......+.+|+.+||+.||++|||+.|+++
T Consensus 243 -~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 243 -PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1112223346889999999999999999999986
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4.5e-51 Score=438.17 Aligned_cols=249 Identities=24% Similarity=0.395 Sum_probs=208.2
Q ss_pred cCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEec
Q 004155 421 NNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEYM 499 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 499 (771)
+.|+..++||+|+||.||+|. ..+|+.||||++........+.+.+|+.+|++++|||||+++++|.+++..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 468889999999999999994 5679999999997655555567899999999999999999999999999999999999
Q ss_pred cCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCCc
Q 004155 500 ENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT 579 (771)
Q Consensus 500 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 579 (771)
++|+|.+++. ...+++.++..++.||+.||+|||++ +||||||||+||||+.++.+||+|||+|+.......
T Consensus 154 ~gg~L~~~l~-----~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 225 (346)
T 4fih_A 154 EGGALTDIVT-----HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 225 (346)
T ss_dssp TTEEHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred CCCcHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCC
Confidence 9999999993 24699999999999999999999998 899999999999999999999999999997755433
Q ss_pred ccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhcCC
Q 004155 580 HISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRLGS 659 (771)
Q Consensus 580 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 659 (771)
. ....+||+.|||||++.+..|+.++|||||||++|||++|++||......+....+ . .+ ..+.+
T Consensus 226 ~-~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i------~-~~-----~~~~~-- 290 (346)
T 4fih_A 226 R-RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------R-DN-----LPPRL-- 290 (346)
T ss_dssp C-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH------H-HS-----SCCCC--
T ss_pred c-ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH------H-cC-----CCCCC--
Confidence 2 34568999999999999999999999999999999999999999764432221111 0 00 00111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 660 NFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 660 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.........+.+|+.+||+.||++|||+.|+++
T Consensus 291 ~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 291 KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111123346889999999999999999999976
No 7
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.6e-51 Score=435.76 Aligned_cols=263 Identities=28% Similarity=0.370 Sum_probs=200.3
Q ss_pred cCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCC----EEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGN----QLLLIY 496 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lV~ 496 (771)
++|.+.++||+|+||+||+|.+ +|+.||||+++.... ....+..|+..+.+++|||||+++++|.+++ ..||||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 4567788999999999999987 589999999965322 1223344566667889999999999998654 689999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhc-----CCCceeccCCCCCcEEEcCCCCeEEEeecCc
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEE-----SRLKIVHRDIKATNVLLDKDLNPKISDFGLA 571 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla 571 (771)
|||++|+|.++|+ ..+++|..+.+|+.|++.||+|||++ +.++|+||||||+|||++.++++||+|||+|
T Consensus 81 Ey~~~gsL~~~l~-----~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 81 DYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp ECCTTCBHHHHHH-----HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred cCCCCCcHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 9999999999994 34689999999999999999999986 2458999999999999999999999999999
Q ss_pred cccCCCCccc---ccccccCCCccchhhhccC------CCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhh-------
Q 004155 572 KLDEEDNTHI---STRVAGTFGYMAPEYAMRG------YLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFY------- 635 (771)
Q Consensus 572 ~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~------- 635 (771)
+......... .....||+.|||||++.+. .++.++|||||||++|||+||++|+..........
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 8765443321 2345799999999999754 46789999999999999999988775432211000
Q ss_pred -HHHHHHHHHhhCChhHHhhhhcCCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 004155 636 -LLDWALILKAQGNLMELVDKRLGSNF-----DKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRA 698 (771)
Q Consensus 636 -~~~~~~~~~~~~~~~~~~d~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 698 (771)
....... .+.+..+.... +.+....+.+++.+||+.||++||||.||+++|+++.
T Consensus 236 ~~~~~~~~--------~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~ 296 (303)
T 3hmm_A 236 PSVEEMRK--------VVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp CCHHHHHH--------HHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred chHHHHHH--------HHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 0000000 11122222222 2345678899999999999999999999999998754
No 8
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.3e-50 Score=428.36 Aligned_cols=247 Identities=23% Similarity=0.349 Sum_probs=207.1
Q ss_pred cCCCCCCccccCCceeEEEE-EcCCCcEEEEEEcccC---ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKG-HMADGTVVAVKQLSSK---SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
++|++.+.||+|+||+||+| +..+|+.||||++.+. .....+.+.+|+++|++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46899999999999999999 4567999999999753 2234578999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 576 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~ 576 (771)
|||+||+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 112 Ey~~gG~L~~~i~----~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 9999999999993 335799999999999999999999998 899999999999999999999999999997754
Q ss_pred CCc-ccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 577 DNT-HISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 577 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
... ......+||+.|||||++.+..++.++||||+||++|||+||++||......+... .+...
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~---------------~i~~~ 249 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFA---------------KIIKL 249 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---------------HHHHT
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---------------HHHcC
Confidence 332 23445789999999999999999999999999999999999999997644322211 11111
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVV 691 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl 691 (771)
.. .++.....++.+++.+||+.||++|||+.|++
T Consensus 250 ~~--~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 250 EY--DFPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CC--CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred CC--CCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 11 11222234578999999999999999999864
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.1e-50 Score=422.31 Aligned_cols=246 Identities=27% Similarity=0.406 Sum_probs=195.8
Q ss_pred CCCCccccCCceeEEEEE-cCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEe----CCEEEEEE
Q 004155 424 APDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIE----GNQLLLIY 496 (771)
Q Consensus 424 ~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lV~ 496 (771)
+..++||+|+||+||+|. ..+++.||+|++... .....+.|.+|++++++++|||||+++++|.+ .+.+||||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 456789999999999994 557899999998653 34446789999999999999999999999875 34689999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEc-CCCCeEEEeecCccccC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLD-KDLNPKISDFGLAKLDE 575 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DFGla~~~~ 575 (771)
|||++|+|.+++. ....+++..+..|+.||+.||+|||++. ++|+||||||+|||++ .++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLK----RFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 9999999999994 3457999999999999999999999982 2499999999999997 47999999999998644
Q ss_pred CCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 576 EDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 576 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
.. .....+||+.|||||++.+ .++.++|||||||++|||+||+.||........ +.. . ...+.....+
T Consensus 184 ~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~--~~~---~-i~~~~~~~~~-- 251 (290)
T 3fpq_A 184 AS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ--IYR---R-VTSGVKPASF-- 251 (290)
T ss_dssp TT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH--HHH---H-HTTTCCCGGG--
T ss_pred CC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH--HHH---H-HHcCCCCCCC--
Confidence 32 2345679999999998865 689999999999999999999999965332211 111 0 1111100011
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
+.....++.+++.+||+.||++|||+.|+++
T Consensus 252 ------~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 252 ------DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ------GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ------CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1112235788999999999999999999986
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.4e-50 Score=431.29 Aligned_cols=251 Identities=23% Similarity=0.258 Sum_probs=203.7
Q ss_pred cCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEec
Q 004155 421 NNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEYM 499 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 499 (771)
+.|...++||+|+||.||+|. ..+|+.||||+++.... ..+|+.++++++|||||++++++.+++..|||||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 467788899999999999995 56799999999975422 246999999999999999999999999999999999
Q ss_pred cCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCC-CeEEEeecCccccCCCC
Q 004155 500 ENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL-NPKISDFGLAKLDEEDN 578 (771)
Q Consensus 500 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DFGla~~~~~~~ 578 (771)
+||+|.++|. ....+++..+..++.||+.||+|||++ +||||||||+||||+.++ ++||+|||+|+......
T Consensus 133 ~gg~L~~~l~----~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 133 EGGSLGQLIK----QMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp TTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred CCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence 9999999994 335799999999999999999999998 899999999999999987 69999999999765432
Q ss_pred cc----cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhh
Q 004155 579 TH----ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVD 654 (771)
Q Consensus 579 ~~----~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 654 (771)
.. .....+||+.|||||++.+..++.++|||||||++|||+||++||...........+. ......
T Consensus 206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~-----~~~~~~----- 275 (336)
T 4g3f_A 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIA-----SEPPPI----- 275 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHH-----HSCCGG-----
T ss_pred cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH-----cCCCCc-----
Confidence 21 1233579999999999999999999999999999999999999998655443321110 000000
Q ss_pred hhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 655 KRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 655 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
..+ +......+.+++.+||+.||++|||+.|+++.|...
T Consensus 276 ~~~----~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 276 REI----PPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp GGS----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hhc----CccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 011 222334588899999999999999999999887653
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=6.4e-50 Score=439.63 Aligned_cols=249 Identities=24% Similarity=0.395 Sum_probs=208.9
Q ss_pred cCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEec
Q 004155 421 NNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEYM 499 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 499 (771)
+.|+..++||+|+||.||+|. ..+|+.||||++........+.+.+|+.+|++++|||||+++++|.+++.+|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 568999999999999999994 5679999999997665555667899999999999999999999999999999999999
Q ss_pred cCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCCc
Q 004155 500 ENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT 579 (771)
Q Consensus 500 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 579 (771)
+||+|.+++. ...+++.++..|+.||+.||+|||++ +||||||||+||||+.++.+||+|||+|+.......
T Consensus 231 ~gG~L~~~i~-----~~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~ 302 (423)
T 4fie_A 231 EGGALTDIVT-----HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 302 (423)
T ss_dssp TTEEHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC
T ss_pred CCCcHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCc
Confidence 9999999993 34699999999999999999999998 899999999999999999999999999987654433
Q ss_pred ccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhcCC
Q 004155 580 HISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRLGS 659 (771)
Q Consensus 580 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 659 (771)
. ....+||+.|||||++.+..|+.++|||||||++|||++|++||......+....+ . .+ ..+.+
T Consensus 303 ~-~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i------~-~~-----~~~~~-- 367 (423)
T 4fie_A 303 R-RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------R-DN-----LPPRL-- 367 (423)
T ss_dssp C-BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH------H-HS-----CCCCC--
T ss_pred c-ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH------H-cC-----CCCCC--
Confidence 2 34568999999999999999999999999999999999999999754432221111 0 00 00111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 660 NFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 660 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.........+.+|+.+||+.||++|||+.|+++
T Consensus 368 ~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 368 KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111122345789999999999999999999986
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.5e-49 Score=414.41 Aligned_cols=245 Identities=26% Similarity=0.382 Sum_probs=190.4
Q ss_pred cCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
++|++.+.||+|+||+||+|. ..+|+.||||++.+.. ......+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 689999999999999999995 4579999999997542 233567999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 576 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~ 576 (771)
||+ +|+|.+++. ....+++.++..++.||+.||+|||++ +|+||||||+|||+++++++||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~----~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 93 EYA-GNELFDYIV----QRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHH----HSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred eCC-CCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 999 679999984 345799999999999999999999998 899999999999999999999999999986654
Q ss_pred CCcccccccccCCCccchhhhccCCC-CchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 577 DNTHISTRVAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 577 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
... .....||+.|||||++.+..+ +.++||||+||++|||+||+.||......... . . +...
T Consensus 165 ~~~--~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~---~---~---------i~~~ 227 (275)
T 3hyh_A 165 GNF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF---K---N---------ISNG 227 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---H---H---------HHHT
T ss_pred CCc--cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHH---H---H---------HHcC
Confidence 322 234679999999999988765 68999999999999999999999754322211 1 0 1111
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
. ..++......+.+++.+||+.||++|||+.|+++
T Consensus 228 ~--~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 228 V--YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp C--CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred C--CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 1 1112222345788999999999999999999987
No 13
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4e-50 Score=434.61 Aligned_cols=266 Identities=25% Similarity=0.354 Sum_probs=214.2
Q ss_pred HHHHHHhcCCCCCCccccCCceeEEEEEcC------CCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCC-CcEEeEEEE
Q 004155 414 RQIKAATNNFAPDNKIGEGGFGPVYKGHMA------DGTVVAVKQLSSKS-KQGNREFVNEIGMISALQH-PNLVKLHGC 485 (771)
Q Consensus 414 ~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h-~niv~l~~~ 485 (771)
++.+...++|++.++||+|+||.||+|.+. .++.||||+++... ....+.|.+|+.+|.+++| ||||+++|+
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 333444578999999999999999999642 24689999997653 3446789999999999965 899999999
Q ss_pred EEeC-CEEEEEEEeccCCCHHHHhcCCCc------------cCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCC
Q 004155 486 CIEG-NQLLLIYEYMENNSLARALFGPEA------------HRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKA 552 (771)
Q Consensus 486 ~~~~-~~~~lV~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp 552 (771)
|.+. +..++|||||++|+|.++|+.... ....++|.+++.|+.|||+||+|||++ +||||||||
T Consensus 137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~ 213 (353)
T 4ase_A 137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 213 (353)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCc
Confidence 9764 568999999999999999965322 134689999999999999999999998 899999999
Q ss_pred CcEEEcCCCCeEEEeecCccccCCCCcc-cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCc
Q 004155 553 TNVLLDKDLNPKISDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPK 630 (771)
Q Consensus 553 ~NIll~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~ 630 (771)
+|||+++++.+||+|||+|+........ ......||+.|||||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~ 293 (353)
T 4ase_A 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 293 (353)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999999976544332 2345679999999999999999999999999999999998 9999976443
Q ss_pred cchhhHHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 631 EDIFYLLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
.+.. . ..+........+.....++.+++.+||+.||++|||++||++.|+.+
T Consensus 294 ~~~~--~-------------~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 294 DEEF--C-------------RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp SHHH--H-------------HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHH--H-------------HHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 3211 1 11111111222233345688999999999999999999999998764
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.6e-49 Score=419.75 Aligned_cols=242 Identities=24% Similarity=0.349 Sum_probs=193.4
Q ss_pred cCCCCCCccccCCceeEEEEEc----CCCcEEEEEEcccCC--hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHM----ADGTVVAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLL 494 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~----~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 494 (771)
++|++.+.||+|+||+||+|.. .+++.||||+++... ......+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 5789999999999999999953 347899999997542 2234468899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCcccc
Q 004155 495 IYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 574 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~ 574 (771)
|||||+||+|.+++. ....+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~----~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLS----KEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 999999999999993 345799999999999999999999998 8999999999999999999999999999865
Q ss_pred CCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhh
Q 004155 575 EEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVD 654 (771)
Q Consensus 575 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 654 (771)
..... ......||+.|||||++.+..++.++||||+||++|||+||++||......+.... +..
T Consensus 177 ~~~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~---------------i~~ 240 (304)
T 3ubd_A 177 IDHEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM---------------ILK 240 (304)
T ss_dssp ----C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---------------HHH
T ss_pred cCCCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHH---------------HHc
Confidence 43332 23346799999999999999999999999999999999999999976543322111 111
Q ss_pred hhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 004155 655 KRLGSNFDKEQVMVMINVALLCTDVSSTSRPSM 687 (771)
Q Consensus 655 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 687 (771)
... .++.....++.+++.+||+.||++|||+
T Consensus 241 ~~~--~~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 241 AKL--GMPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp CCC--CCCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred CCC--CCCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 111 1222233457899999999999999995
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.6e-47 Score=404.24 Aligned_cols=250 Identities=22% Similarity=0.366 Sum_probs=187.9
Q ss_pred cCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCC--------
Q 004155 421 NNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEGN-------- 490 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------- 490 (771)
++|++.+.||+|+||.||+|. ..+|+.||||+++... ....+.+.+|+.+|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 468899999999999999995 5679999999997543 334567999999999999999999999987543
Q ss_pred ----EEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEE
Q 004155 491 ----QLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKIS 566 (771)
Q Consensus 491 ----~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 566 (771)
+.|+|||||++|+|.+++..... ....++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCT-IEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCS-GGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCC-CChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 47999999999999999965432 22456777899999999999999998 89999999999999999999999
Q ss_pred eecCccccCCCCcc-----------cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhh
Q 004155 567 DFGLAKLDEEDNTH-----------ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFY 635 (771)
Q Consensus 567 DFGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~ 635 (771)
|||+|+........ ..+..+||+.|||||++.+..++.++|||||||++|||++ ||... .+...
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~--~~~~~ 235 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ--MERVR 235 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH--HHHHH
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc--cHHHH
Confidence 99999876543221 1233579999999999999999999999999999999996 66421 11100
Q ss_pred HHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 636 LLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.. . ........... ........+++.+||+.||++|||+.|+++
T Consensus 236 ~~---~-~~~~~~~p~~~---------~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 236 TL---T-DVRNLKFPPLF---------TQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HH---H-HHHTTCCCHHH---------HHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HH---H-HHhcCCCCCCC---------cccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00 0 00111111111 122334678999999999999999999986
No 16
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.8e-46 Score=404.64 Aligned_cols=293 Identities=45% Similarity=0.767 Sum_probs=251.9
Q ss_pred cCCCCHHHHHHHhcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCCh-hcHHHHHHHHHHHHcCCCCcEEeEEEEE
Q 004155 408 TGSFTLRQIKAATNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSK-QGNREFVNEIGMISALQHPNLVKLHGCC 486 (771)
Q Consensus 408 ~~~~~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~ 486 (771)
...|+++++..++++|++.+.||+|+||.||+|...+|+.||||++..... .....+.+|+.++++++||||+++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 456899999999999999999999999999999888899999999976432 2234689999999999999999999999
Q ss_pred EeCCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEE
Q 004155 487 IEGNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKIS 566 (771)
Q Consensus 487 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 566 (771)
.+.+..++||||+++|+|.+++.........+++..+..|+.|++.||+|||+.+.++|+||||||+|||++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999998766666679999999999999999999999866689999999999999999999999
Q ss_pred eecCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCC--CccchhhHHHHHHHHH
Q 004155 567 DFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCK--PKEDIFYLLDWALILK 644 (771)
Q Consensus 567 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~--~~~~~~~~~~~~~~~~ 644 (771)
|||+++..............||+.|+|||++.+..++.++|||||||++|||++|+.||... .........+|.....
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence 99999977655555555567999999999999889999999999999999999999999631 1122233455555555
Q ss_pred hhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 645 AQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 645 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
.......+.+..+......+....+.+++.+||+.||++|||+.||+++|++....
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~ 312 (326)
T 3uim_A 257 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312 (326)
T ss_dssp SSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCS
T ss_pred hchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchh
Confidence 56666677777777778888999999999999999999999999999999985433
No 17
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.3e-46 Score=405.00 Aligned_cols=287 Identities=43% Similarity=0.738 Sum_probs=249.9
Q ss_pred CCHHHHHHHhcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCC
Q 004155 411 FTLRQIKAATNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGN 490 (771)
Q Consensus 411 ~~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 490 (771)
+++.++..++++|+..+.||+|+||.||+|...+|+.||||++........+.+.+|+.++++++||||+++++++.+.+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 44555666889999999999999999999998889999999988766666788999999999999999999999999999
Q ss_pred EEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecC
Q 004155 491 QLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 570 (771)
Q Consensus 491 ~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGl 570 (771)
..++||||+++|+|.+++.........+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999999999999999976554455799999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCC-cccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCCh
Q 004155 571 AKLDEEDN-THISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNL 649 (771)
Q Consensus 571 a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (771)
++...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||......+......|.......+.+
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccH
Confidence 98654322 22234456899999999999999999999999999999999999999876666666667776666666667
Q ss_pred hHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 650 MELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 650 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
...+++.+......+....+.+++.+||+.||++||++.|+++.|+.+...
T Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 777777776677788899999999999999999999999999999876543
No 18
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-45 Score=403.93 Aligned_cols=271 Identities=19% Similarity=0.268 Sum_probs=205.0
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCC--hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEe------CC
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLHGCCIE------GN 490 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~ 490 (771)
.++|++.+.||+|+||+||+|. ..+|+.||||+++... ....+.+.+|+++|++++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 3679999999999999999994 5679999999997542 3345678899999999999999999999764 36
Q ss_pred EEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecC
Q 004155 491 QLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 570 (771)
Q Consensus 491 ~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGl 570 (771)
..|+|||||+ |+|.+++.. ...+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~----~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTS----SSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEEeCCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 7899999996 689999943 35799999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCC---cccccccccCCCccchhhhccC-CCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHh-
Q 004155 571 AKLDEEDN---THISTRVAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKA- 645 (771)
Q Consensus 571 a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~- 645 (771)
|+...... .......+||+.|||||++.+. .++.++||||+||++|||++|++||......+....+........
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~ 284 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 284 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCG
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 98664322 2223456899999999998875 679999999999999999999999976544333222111000000
Q ss_pred -------hCChhHHhhhhcC-CCCCH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHH--HhcCCC
Q 004155 646 -------QGNLMELVDKRLG-SNFDK-----EQVMVMINVALLCTDVSSTSRPSMSSVVS--MLEGRA 698 (771)
Q Consensus 646 -------~~~~~~~~d~~l~-~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~~~ 698 (771)
.......+..... ...+. .....+.+|+.+||+.||++|||+.|+++ .+++..
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 352 (398)
T 4b99_A 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH 352 (398)
T ss_dssp GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence 0000111110000 00010 11245789999999999999999999987 455543
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1e-44 Score=394.73 Aligned_cols=202 Identities=26% Similarity=0.416 Sum_probs=173.1
Q ss_pred HHHHhcCCCCCCccccCCceeEEEEEc----CCCcEEEEEEcccCChhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeCC
Q 004155 416 IKAATNNFAPDNKIGEGGFGPVYKGHM----ADGTVVAVKQLSSKSKQGNREFVNEIGMISAL-QHPNLVKLHGCCIEGN 490 (771)
Q Consensus 416 l~~~~~~f~~~~~lG~G~~g~Vy~~~~----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 490 (771)
+....++|++.++||+|+||+||+|.. ..++.||||++.... ...++.+|+++|+.+ +||||+++++++.+.+
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~ 93 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND 93 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence 334568899999999999999999953 346889999986543 345688999999998 6999999999999999
Q ss_pred EEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCC-CCeEEEeec
Q 004155 491 QLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKD-LNPKISDFG 569 (771)
Q Consensus 491 ~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DFG 569 (771)
+.|+||||+++|+|.+++ ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||
T Consensus 94 ~~~lvmE~~~g~~L~~~~-------~~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFG 163 (361)
T 4f9c_A 94 HVVIAMPYLEHESFLDIL-------NSLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFG 163 (361)
T ss_dssp EEEEEEECCCCCCHHHHH-------TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEEEEeCCCcccHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCC
Confidence 999999999999999999 2589999999999999999999998 89999999999999877 799999999
Q ss_pred CccccCCCCcc---------------------------cccccccCCCccchhhhccC-CCCchHhHHHHHHHHHHHHhC
Q 004155 570 LAKLDEEDNTH---------------------------ISTRVAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSG 621 (771)
Q Consensus 570 la~~~~~~~~~---------------------------~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~S~Gvil~elltG 621 (771)
+|+........ .....+||+.|+|||++.+. .++.++||||+||++|||+||
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G 243 (361)
T 4f9c_A 164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG 243 (361)
T ss_dssp TCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT
T ss_pred CCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHC
Confidence 99865432211 11235799999999999875 589999999999999999999
Q ss_pred CCCCCCCC
Q 004155 622 RSNSSCKP 629 (771)
Q Consensus 622 ~~p~~~~~ 629 (771)
+.||....
T Consensus 244 ~~Pf~~~~ 251 (361)
T 4f9c_A 244 RYPFYKAS 251 (361)
T ss_dssp CSSSSCCS
T ss_pred CCCCCCCC
Confidence 99996543
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.1e-44 Score=414.08 Aligned_cols=252 Identities=22% Similarity=0.328 Sum_probs=209.0
Q ss_pred hcCCCCCCccccCCceeEEEE-EcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEe
Q 004155 420 TNNFAPDNKIGEGGFGPVYKG-HMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEY 498 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 498 (771)
.++|++.+.||+|+||.||+| ...+|+.||+|++........+.+.+|+.+|+.++|||||+++++|.+.+..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 468999999999999999999 4567999999999876666677899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCC--CCeEEEeecCccccCC
Q 004155 499 MENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKD--LNPKISDFGLAKLDEE 576 (771)
Q Consensus 499 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~DFGla~~~~~ 576 (771)
|+||+|.++|... ...+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+....
T Consensus 236 ~~gg~L~~~i~~~---~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 236 MSGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp CCCCBHHHHHTCT---TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred cCCCcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 9999999999432 34699999999999999999999998 89999999999999854 8999999999997755
Q ss_pred CCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhh
Q 004155 577 DNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKR 656 (771)
Q Consensus 577 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 656 (771)
... ....+||+.|||||++.+..++.++||||+||++|||++|++||......+....+ ....... ...
T Consensus 310 ~~~--~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i-----~~~~~~~----~~~ 378 (573)
T 3uto_A 310 KQS--VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV-----KSCDWNM----DDS 378 (573)
T ss_dssp TSE--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH-----HTTCCCC----CSG
T ss_pred CCc--eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH-----HhCCCCC----Ccc
Confidence 432 23457999999999999999999999999999999999999999765433221111 0000000 000
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 657 LGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 657 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.... ....+.+|+.+||+.||++||++.|+++
T Consensus 379 ~~~~----~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 379 AFSG----ISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp GGTT----SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cccC----CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0111 2345788999999999999999999987
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=5.2e-44 Score=409.68 Aligned_cols=248 Identities=25% Similarity=0.299 Sum_probs=199.1
Q ss_pred cCCCCCCccccCCceeEEEE-EcCCCcEEEEEEcccCC---hhcHHHH---HHHHHHHHcCCCCcEEeEEEEEEeCCEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKG-HMADGTVVAVKQLSSKS---KQGNREF---VNEIGMISALQHPNLVKLHGCCIEGNQLL 493 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~l~~~~---~~~~~~~---~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 493 (771)
++|++.++||+|+||.||+| ...+|+.||||++.+.. ......+ ..++.+++.++|||||+++++|.+.+.+|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 57999999999999999999 45679999999996431 1222233 34466777889999999999999999999
Q ss_pred EEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccc
Q 004155 494 LIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 573 (771)
Q Consensus 494 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~ 573 (771)
+|||||+||+|.++|. ....+++..+..++.||+.||+|||++ +||||||||+||||+.+|++||+|||+|+.
T Consensus 269 lVmEy~~GGdL~~~l~----~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLS----QHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEECCCCSCBHHHHHH----HHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeee
Confidence 9999999999999993 345799999999999999999999998 899999999999999999999999999987
Q ss_pred cCCCCcccccccccCCCccchhhhcc-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHH
Q 004155 574 DEEDNTHISTRVAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMEL 652 (771)
Q Consensus 574 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (771)
...... ...+||+.|||||++.+ ..++.++||||+||++|||++|++||......+...+... +
T Consensus 342 ~~~~~~---~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~------------i 406 (689)
T 3v5w_A 342 FSKKKP---HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM------------T 406 (689)
T ss_dssp CSSCCC---CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHH------------H
T ss_pred cCCCCC---CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh------------h
Confidence 654332 34679999999999975 5799999999999999999999999975433332211110 1
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 004155 653 VDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPS-----MSSVVS 692 (771)
Q Consensus 653 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~ 692 (771)
.... ..++......+.+|+.+||+.||.+|++ +.||++
T Consensus 407 ~~~~--~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 407 LTMA--VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp HHCC--CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred cCCC--CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 1111 1122223345789999999999999998 577754
No 22
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.4e-42 Score=369.31 Aligned_cols=250 Identities=25% Similarity=0.449 Sum_probs=208.8
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEe
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEY 498 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 498 (771)
.++|++.++||+|+||.||+|. ..+|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 4689999999999999999995 467899999999766555677899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCC
Q 004155 499 MENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 578 (771)
Q Consensus 499 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~ 578 (771)
+++|+|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 99 ~~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (297)
T 3fxz_A 99 LAGGSLTDVVT-----ETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (297)
T ss_dssp CTTCBHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCCCHHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence 99999999993 23689999999999999999999998 89999999999999999999999999998765443
Q ss_pred cccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhcC
Q 004155 579 THISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRLG 658 (771)
Q Consensus 579 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 658 (771)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||........... ..... ...
T Consensus 171 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~------~~~~~--------~~~ 235 (297)
T 3fxz_A 171 SK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL------IATNG--------TPE 235 (297)
T ss_dssp CC-BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH------HHHHC--------SCC
T ss_pred cc-cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH------HHhCC--------CCC
Confidence 32 2345799999999999999999999999999999999999999975433221111 00000 000
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 659 SNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 659 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
...+......+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 236 LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1112223446889999999999999999999986
No 23
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.5e-43 Score=374.05 Aligned_cols=259 Identities=28% Similarity=0.466 Sum_probs=212.9
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEe
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEY 498 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 498 (771)
.++|.+.++||+|+||.||+|.. .+++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 35688899999999999999954 56899999999777777788899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCC
Q 004155 499 MENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 578 (771)
Q Consensus 499 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~ 578 (771)
+++|+|.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 89 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 89 IKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp CTTCBHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred cCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 9999999999532 34699999999999999999999998 89999999999999999999999999998764432
Q ss_pred ccc-------------ccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHh
Q 004155 579 THI-------------STRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKA 645 (771)
Q Consensus 579 ~~~-------------~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 645 (771)
... .....||+.|+|||++.+..++.++|||||||++|||++|..|+..........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~---------- 232 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF---------- 232 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS----------
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH----------
Confidence 211 114579999999999999999999999999999999999999987543322110
Q ss_pred hCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 004155 646 QGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRA 698 (771)
Q Consensus 646 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 698 (771)
........+....... ...+.+++.+||+.||++||++.|+++.|+.+.
T Consensus 233 ~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 233 GLNVRGFLDRYCPPNC----PPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp SBCHHHHHHHTCCTTC----CTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhhhhccccccCCCCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0011122222222222 234788999999999999999999999998764
No 24
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=7.5e-42 Score=365.06 Aligned_cols=282 Identities=38% Similarity=0.628 Sum_probs=232.1
Q ss_pred cCCCCHHHHHHHhcCCCCC------CccccCCceeEEEEEcCCCcEEEEEEcccC----ChhcHHHHHHHHHHHHcCCCC
Q 004155 408 TGSFTLRQIKAATNNFAPD------NKIGEGGFGPVYKGHMADGTVVAVKQLSSK----SKQGNREFVNEIGMISALQHP 477 (771)
Q Consensus 408 ~~~~~~~~l~~~~~~f~~~------~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~----~~~~~~~~~~E~~~l~~l~h~ 477 (771)
...|++.++..++++|... ++||+|+||.||+|.. +++.||||++... .....+.+.+|+.++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4579999999999999888 8999999999999987 6889999998653 233467899999999999999
Q ss_pred cEEeEEEEEEeCCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEE
Q 004155 478 NLVKLHGCCIEGNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLL 557 (771)
Q Consensus 478 niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll 557 (771)
||+++++++.+.+..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+. +|+||||||+||++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili 166 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILL 166 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG-GCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEE
Confidence 99999999999999999999999999999996432 234699999999999999999999998 89999999999999
Q ss_pred cCCCCeEEEeecCccccCCCCc-ccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhH
Q 004155 558 DKDLNPKISDFGLAKLDEEDNT-HISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYL 636 (771)
Q Consensus 558 ~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~ 636 (771)
+.++.+||+|||+++....... .......||+.|+|||.+.+ .++.++||||||+++|||++|+.||..........
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~- 244 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL- 244 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT-
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHH-
Confidence 9999999999999986654322 22334579999999998865 57899999999999999999999997654332211
Q ss_pred HHHHHHHH-hhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 004155 637 LDWALILK-AQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRA 698 (771)
Q Consensus 637 ~~~~~~~~-~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 698 (771)
.+..... ....+.+.+++.+ ..........+.+++.+||+.||.+||++.+|++.|+++.
T Consensus 245 -~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 245 -DIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp -HHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred -HHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 1111111 2233445555544 3456677888999999999999999999999999998754
No 25
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=7.3e-42 Score=368.00 Aligned_cols=263 Identities=26% Similarity=0.407 Sum_probs=215.5
Q ss_pred ccCCCCHHHHHHHhcC----------CCCCCccccCCceeEEEEEcC-CCcEEEEEEcccCChhcHHHHHHHHHHHHcCC
Q 004155 407 HTGSFTLRQIKAATNN----------FAPDNKIGEGGFGPVYKGHMA-DGTVVAVKQLSSKSKQGNREFVNEIGMISALQ 475 (771)
Q Consensus 407 ~~~~~~~~~l~~~~~~----------f~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~ 475 (771)
..+.+++++++.+++. |...++||+|+||.||+|... +|+.||||++........+.+.+|+.++++++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~ 100 (321)
T 2c30_A 21 QSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ 100 (321)
T ss_dssp ----CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCC
T ss_pred cCCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCC
Confidence 3456899999998875 667789999999999999654 79999999998766666778999999999999
Q ss_pred CCcEEeEEEEEEeCCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcE
Q 004155 476 HPNLVKLHGCCIEGNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNV 555 (771)
Q Consensus 476 h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NI 555 (771)
||||+++++++...+..++||||+++++|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||
T Consensus 101 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NI 172 (321)
T 2c30_A 101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS-----QVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSI 172 (321)
T ss_dssp CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGE
T ss_pred CCCcceEEEEEEECCEEEEEEecCCCCCHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHE
Confidence 9999999999999999999999999999999983 24699999999999999999999998 899999999999
Q ss_pred EEcCCCCeEEEeecCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhh
Q 004155 556 LLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFY 635 (771)
Q Consensus 556 ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~ 635 (771)
+++.++.+||+|||+++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 173 ll~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~-- 249 (321)
T 2c30_A 173 LLTLDGRVKLSDFGFCAQISKDVPK-RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA-- 249 (321)
T ss_dssp EECTTCCEEECCCTTCEECCSSSCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--
T ss_pred EECCCCcEEEeeeeeeeecccCccc-cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--
Confidence 9999999999999999876543322 2345799999999999999999999999999999999999999975432211
Q ss_pred HHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 636 LLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
... ... . ..+.+ .........+.+++.+||+.||++||++.|+++
T Consensus 250 -~~~---~~~-~-----~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 250 -MKR---LRD-S-----PPPKL--KNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp -HHH---HHH-S-----SCCCC--TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -HHH---Hhc-C-----CCCCc--CccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111 000 0 00011 011122345788999999999999999999987
No 26
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=5.9e-43 Score=374.42 Aligned_cols=266 Identities=29% Similarity=0.440 Sum_probs=206.0
Q ss_pred HHHHHHhcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCC--hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCE
Q 004155 414 RQIKAATNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQ 491 (771)
Q Consensus 414 ~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 491 (771)
.++....++|++.+.||+|+||.||+|.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 108 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN 108 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence 33444567889999999999999999976 68999999987643 3445678999999999999999999999999999
Q ss_pred EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCc--eeccCCCCCcEEEcCCCCeEEEeec
Q 004155 492 LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLK--IVHRDIKATNVLLDKDLNPKISDFG 569 (771)
Q Consensus 492 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~DFG 569 (771)
.++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+. + |+||||||+||+++.++.+||+|||
T Consensus 109 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg 184 (309)
T 3p86_A 109 LSIVTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFG 184 (309)
T ss_dssp CEEEEECCTTCBHHHHHHSTTH-HHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC
T ss_pred eEEEEecCCCCcHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCC
Confidence 9999999999999999954321 12489999999999999999999998 6 9999999999999999999999999
Q ss_pred CccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCCh
Q 004155 570 LAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNL 649 (771)
Q Consensus 570 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (771)
+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+..... .
T Consensus 185 ~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~------~----- 252 (309)
T 3p86_A 185 LSRLKASTFL-SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV------G----- 252 (309)
T ss_dssp ------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHH------H-----
T ss_pred CCcccccccc-ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH------H-----
Confidence 9986543321 223457999999999999999999999999999999999999999754432221100 0
Q ss_pred hHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 650 MELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 650 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
........+......+.+++.+||+.||++||++.|+++.|+.....
T Consensus 253 ----~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 253 ----FKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp ----HSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred ----hcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 00011122223345688999999999999999999999999886543
No 27
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.3e-42 Score=361.91 Aligned_cols=254 Identities=26% Similarity=0.430 Sum_probs=211.4
Q ss_pred cCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEecc
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEYME 500 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 500 (771)
++|++.+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 5788899999999999999988788999999997643 345679999999999999999999999999999999999999
Q ss_pred CCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCCcc
Q 004155 501 NNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTH 580 (771)
Q Consensus 501 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~~~ 580 (771)
+++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 89 ~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 162 (269)
T 4hcu_A 89 HGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 162 (269)
T ss_dssp TCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCcHHHHHHhc---CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccc
Confidence 99999999543 34689999999999999999999998 8999999999999999999999999999876544333
Q ss_pred cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhcCC
Q 004155 581 ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRLGS 659 (771)
Q Consensus 581 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 659 (771)
......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+.... +......
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~----------------~~~~~~~ 226 (269)
T 4hcu_A 163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED----------------ISTGFRL 226 (269)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH----------------HHTTCCC
T ss_pred cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHH----------------HhcCccC
Confidence 3334557788999999999999999999999999999999 9999975443221110 1111111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 660 NFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 660 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
..+......+.+++.+||+.||++||++.|+++.|+++
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l 264 (269)
T 4hcu_A 227 YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264 (269)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHH
Confidence 11222344688999999999999999999999999875
No 28
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.5e-42 Score=376.33 Aligned_cols=260 Identities=27% Similarity=0.422 Sum_probs=212.4
Q ss_pred hcCCCCCCccccCCceeEEEEEc--------CCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeC
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM--------ADGTVVAVKQLSSKS-KQGNREFVNEIGMISAL-QHPNLVKLHGCCIEG 489 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~--------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 489 (771)
.++|.+.+.||+|+||.||+|.. .++..||||+++... ....+.+.+|+.+++++ +||||++++++|.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 36788899999999999999954 245689999997653 33456899999999999 899999999999999
Q ss_pred CEEEEEEEeccCCCHHHHhcCCCc------------cCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEE
Q 004155 490 NQLLLIYEYMENNSLARALFGPEA------------HRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLL 557 (771)
Q Consensus 490 ~~~~lV~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll 557 (771)
+..++||||+++|+|.+++..... ....+++.+++.++.||+.||+|||++ +|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 999999999999999999964321 124589999999999999999999998 89999999999999
Q ss_pred cCCCCeEEEeecCccccCCCCc-ccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhh
Q 004155 558 DKDLNPKISDFGLAKLDEEDNT-HISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFY 635 (771)
Q Consensus 558 ~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~ 635 (771)
+.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||+| |+.||......+...
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~ 316 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 316 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 9999999999999986654332 12233457889999999999999999999999999999999 999997654433221
Q ss_pred HHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 004155 636 LLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRA 698 (771)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 698 (771)
.+........+......+.+++.+||+.||++||++.|+++.|+.+.
T Consensus 317 ----------------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 317 ----------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp ----------------HHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----------------HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11111111222334456889999999999999999999999998753
No 29
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.5e-41 Score=360.77 Aligned_cols=263 Identities=26% Similarity=0.350 Sum_probs=207.8
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccC---ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSK---SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 495 (771)
.++|++.+.||+|+||.||+|. ..+++.||+|++... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 4678999999999999999995 457899999998543 233456789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|||+++++|.+++. ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~e~~~g~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 90 MEYIEGPTLSEYIE----SHGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EECCCSCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EeCCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 99999999999993 234699999999999999999999998 89999999999999999999999999998765
Q ss_pred CCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 576 EDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 576 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
...........||+.|+|||.+.+..++.++|||||||++|||++|+.||......... .... ....... ..
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~------~~~~-~~~~~~~-~~ 234 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA------IKHI-QDSVPNV-TT 234 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH------HHHH-SSCCCCH-HH
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH------HHHh-hccCCCc-ch
Confidence 54433344567999999999999999999999999999999999999999754322110 0000 1111110 11
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhcCCCCCC
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRP-SMSSVVSMLEGRADVQ 701 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~~~~~~ 701 (771)
..... .+..+.+++.+|++.||++|| ++.++.+.|+......
T Consensus 235 ~~~~~----~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 235 DVRKD----IPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp HSCTT----SCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred hcccC----CCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 11122 234688999999999999999 9999999999876544
No 30
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.7e-42 Score=361.01 Aligned_cols=258 Identities=25% Similarity=0.392 Sum_probs=213.4
Q ss_pred hcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEec
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEYM 499 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 499 (771)
.++|++.+.||+|+||.||+|...++..||+|+++... ...+++.+|++++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 46788899999999999999988888899999997643 34567999999999999999999999999999999999999
Q ss_pred cCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCCc
Q 004155 500 ENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT 579 (771)
Q Consensus 500 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 579 (771)
++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 86 ~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 86 SNGCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp TTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred CCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 999999999432 34699999999999999999999998 899999999999999999999999999987665544
Q ss_pred ccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhcC
Q 004155 580 HISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRLG 658 (771)
Q Consensus 580 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 658 (771)
.......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.......... .. .....
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~------~~----------~~~~~ 223 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL------KV----------SQGHR 223 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH------HH----------HTTCC
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHH------HH----------HcCCC
Confidence 33344557778999999998889999999999999999999 999997543322111 00 00001
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 659 SNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 659 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
...+......+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 224 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 224 LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 111112234688999999999999999999999999987554
No 31
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=372.79 Aligned_cols=258 Identities=28% Similarity=0.433 Sum_probs=209.3
Q ss_pred cCCCCCCccccCCceeEEEEEcC----CCcEEEEEEcccC-ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHMA----DGTVVAVKQLSSK-SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 495 (771)
++|++.+.||+|+||.||+|... .+..||||+++.. .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 56788899999999999999653 4557999999765 344567899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|||+++|+|.+++... ...+++..++.|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 129 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 129 TEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred eeCCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 9999999999999543 24699999999999999999999998 89999999999999999999999999998765
Q ss_pred CCCcc--cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHH
Q 004155 576 EDNTH--ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMEL 652 (771)
Q Consensus 576 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (771)
..... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+... .
T Consensus 203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~----------------~ 266 (325)
T 3kul_A 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVIS----------------S 266 (325)
T ss_dssp ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHH----------------H
T ss_pred cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHH----------------H
Confidence 43322 2223346778999999999999999999999999999999 999997543322211 1
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 653 VDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 653 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
+........+......+.+++.+||+.||++||++.||+++|+.+...
T Consensus 267 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 267 VEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 111111122233445688999999999999999999999999986543
No 32
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.4e-42 Score=372.98 Aligned_cols=250 Identities=22% Similarity=0.333 Sum_probs=197.5
Q ss_pred HhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
..++|++.+.||+|+||.||+|. ..+|+.||||++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 46789999999999999999995 5679999999987643 223456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 576 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~ 576 (771)
||+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 88 E~~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 88 EYCPGGELFDYII----SQDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp ECCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred eCCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 9999999999993 234699999999999999999999998 899999999999999999999999999986654
Q ss_pred CCcccccccccCCCccchhhhccCCC-CchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 577 DNTHISTRVAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 577 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
..........||+.|+|||++.+..+ +.++|||||||++|||++|+.||.......... .+...
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~---------------~i~~~ 225 (347)
T 3zgw_A 161 NKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYK---------------KIMRG 225 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---------------HHHHT
T ss_pred CCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHH---------------HHHcC
Confidence 43333445679999999999988765 899999999999999999999997543222111 11111
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.. ..+......+.+++.+||+.||++|||+.|+++
T Consensus 226 ~~--~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 226 KY--DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp CC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CC--CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 11 111222345778999999999999999999986
No 33
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1e-41 Score=367.78 Aligned_cols=247 Identities=24% Similarity=0.353 Sum_probs=205.5
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
.++|++.+.||+|+||.||+|. ..+|+.||||++... .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 4679999999999999999995 468999999998654 3344567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 576 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~ 576 (771)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 94 e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 94 EYASGGEVFDYLVA----HGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp CCCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred ECCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 99999999999932 35699999999999999999999998 899999999999999999999999999986654
Q ss_pred CCcccccccccCCCccchhhhccCCCC-chHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 577 DNTHISTRVAGTFGYMAPEYAMRGYLT-DKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 577 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
... .....||+.|+|||++.+..+. .++|||||||++|||++|+.||......+... .+...
T Consensus 167 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~---------------~i~~~ 229 (328)
T 3fe3_A 167 GGK--LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRE---------------RVLRG 229 (328)
T ss_dssp SCG--GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---------------HHHHC
T ss_pred CCc--cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHH---------------HHHhC
Confidence 332 3446799999999999887765 89999999999999999999997644322111 01111
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.. ..+......+.+++.+||+.||.+|||+.|+++
T Consensus 230 ~~--~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 230 KY--RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp CC--CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred CC--CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11 112223345788999999999999999999986
No 34
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.2e-42 Score=372.20 Aligned_cols=269 Identities=26% Similarity=0.362 Sum_probs=207.7
Q ss_pred hcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCC----EEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGN----QLLLI 495 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lV 495 (771)
.++|++.++||+|+||.||+|... ++.||||++.... .....+..|+.++++++||||+++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 467889999999999999999774 7999999997543 33445667899999999999999999998743 47999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhc-------CCCceeccCCCCCcEEEcCCCCeEEEee
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEE-------SRLKIVHRDIKATNVLLDKDLNPKISDF 568 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~-------~~~~ivH~Dlkp~NIll~~~~~~kl~DF 568 (771)
|||+++|+|.+++.. ..+++..++.++.|++.||+|||+. +.++|+||||||+|||++.++.+||+||
T Consensus 101 ~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 101 TAFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 999999999999932 4589999999999999999999986 1237999999999999999999999999
Q ss_pred cCccccCCCCcc-cccccccCCCccchhhhccC-----CCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHH
Q 004155 569 GLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRG-----YLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALI 642 (771)
Q Consensus 569 Gla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~ 642 (771)
|+++........ ......||+.|+|||++.+. .++.++|||||||++|||+||+.||..............
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~--- 252 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE--- 252 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH---
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh---
Confidence 999876543322 22335799999999999863 556789999999999999999999976443322111110
Q ss_pred HHhhCChhHHhh----hhcCCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 004155 643 LKAQGNLMELVD----KRLGSNF-----DKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRA 698 (771)
Q Consensus 643 ~~~~~~~~~~~d----~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 698 (771)
.........+.+ ....... .......+.+++.+||+.||++|||+.||++.|+.+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 253 IGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp HCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 000111111111 1111111 1245567999999999999999999999999998753
No 35
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=6.3e-42 Score=376.20 Aligned_cols=258 Identities=28% Similarity=0.468 Sum_probs=200.5
Q ss_pred hcCCCCCCccccCCceeEEEEEcC----CCcEEEEEEcccC-ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMA----DGTVVAVKQLSSK-SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLL 494 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 494 (771)
.++|.+.+.||+|+||.||+|... ++..||||+++.. .....+.|.+|+.++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357889999999999999999654 5778999999764 33456789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCcccc
Q 004155 495 IYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 574 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~ 574 (771)
||||+++|+|.+++... ...+++.+++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 124 v~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp EEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 99999999999999543 34689999999999999999999998 8999999999999999999999999999876
Q ss_pred CCCCccc--ccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhH
Q 004155 575 EEDNTHI--STRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLME 651 (771)
Q Consensus 575 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (771)
....... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+.. .
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~----------------~ 261 (373)
T 2qol_A 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI----------------K 261 (373)
T ss_dssp ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHH----------------H
T ss_pred ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH----------------H
Confidence 5433221 122345778999999999999999999999999999998 99999754332211 1
Q ss_pred HhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 004155 652 LVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRAD 699 (771)
Q Consensus 652 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 699 (771)
.++.......+......+.+++.+||+.||++||++.||+++|+.+..
T Consensus 262 ~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 262 AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp HHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 111111122223345568899999999999999999999999987643
No 36
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.2e-42 Score=369.12 Aligned_cols=265 Identities=26% Similarity=0.411 Sum_probs=207.3
Q ss_pred hcCCCCCCccccCCceeEEEEEc-----CCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEe--CCEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-----ADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIE--GNQL 492 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 492 (771)
.++|++.++||+|+||.||+|.+ .+++.||||++........+.+.+|+.++++++||||+++++++.. ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 36788899999999999999963 4689999999987776667889999999999999999999999864 3568
Q ss_pred EEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCcc
Q 004155 493 LLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 572 (771)
Q Consensus 493 ~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~ 572 (771)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 89 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp EEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred EEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 9999999999999999443 23589999999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCcc--cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhC---
Q 004155 573 LDEEDNTH--ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQG--- 647 (771)
Q Consensus 573 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--- 647 (771)
........ ......+|..|+|||.+.+..++.++||||||+++|||+||..|+.....+. ........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-------~~~~~~~~~~~ 235 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF-------MRMIGNDKQGQ 235 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHH-------HHHHCTTCCTH
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHH-------HhhhcCccccc
Confidence 76543321 2223457778999999999999999999999999999999999986421110 00000000
Q ss_pred ----ChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 648 ----NLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 648 ----~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
...+.+........+......+.+++.+||+.||++|||+.|++++|+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l 289 (295)
T 3ugc_A 236 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289 (295)
T ss_dssp HHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 11111222222222334456788999999999999999999999999875
No 37
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=8.4e-42 Score=360.24 Aligned_cols=255 Identities=24% Similarity=0.380 Sum_probs=208.8
Q ss_pred hcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEec
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEYM 499 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 499 (771)
.++|++.+.||+|+||.||+|...++..||||++.... ...+++.+|++++++++||||+++++++.+.+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 45788899999999999999988888899999997643 33567999999999999999999999999999999999999
Q ss_pred cCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCCc
Q 004155 500 ENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT 579 (771)
Q Consensus 500 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 579 (771)
++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 102 ~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 175 (283)
T 3gen_A 102 ANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175 (283)
T ss_dssp TTCBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred CCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence 999999999542 34699999999999999999999998 899999999999999999999999999987654333
Q ss_pred ccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhcC
Q 004155 580 HISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRLG 658 (771)
Q Consensus 580 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 658 (771)
.......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||.......... .+.....
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~----------------~~~~~~~ 239 (283)
T 3gen_A 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE----------------HIAQGLR 239 (283)
T ss_dssp HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH----------------HHHTTCC
T ss_pred ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHH----------------HHhcccC
Confidence 33334457788999999999999999999999999999998 999997544322111 1111111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 659 SNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 659 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
...+......+.+++.+||+.||++||++.|+++.|+++
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~ 278 (283)
T 3gen_A 240 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 278 (283)
T ss_dssp CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 111222234688999999999999999999999999864
No 38
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.2e-42 Score=386.19 Aligned_cols=264 Identities=20% Similarity=0.243 Sum_probs=211.7
Q ss_pred CCHHHHHHHhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCCh---hcHHHHHHHHHHHHcCCCCcEEeEEEEE
Q 004155 411 FTLRQIKAATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSK---QGNREFVNEIGMISALQHPNLVKLHGCC 486 (771)
Q Consensus 411 ~~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~ 486 (771)
+.+++++..+++|++.++||+|+||+||+|.. .+++.||+|++..... .....+.+|..++..++||||++++++|
T Consensus 64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 143 (437)
T 4aw2_A 64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF 143 (437)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 34566777789999999999999999999965 4588999999865321 1223488999999999999999999999
Q ss_pred EeCCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEE
Q 004155 487 IEGNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKIS 566 (771)
Q Consensus 487 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 566 (771)
.+.+..++|||||++|+|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 144 ~~~~~~~lV~Ey~~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~ 217 (437)
T 4aw2_A 144 QDDNNLYLVMDYYVGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLA 217 (437)
T ss_dssp ECSSEEEEEECCCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred eeCCEEEEEEecCCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEc
Confidence 9999999999999999999999542 34699999999999999999999998 89999999999999999999999
Q ss_pred eecCccccCCCCcccccccccCCCccchhhhc-----cCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHH
Q 004155 567 DFGLAKLDEEDNTHISTRVAGTFGYMAPEYAM-----RGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWAL 641 (771)
Q Consensus 567 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~ 641 (771)
|||+|+..............||+.|+|||++. ...++.++|||||||++|||++|++||......+....+ .
T Consensus 218 DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i---~ 294 (437)
T 4aw2_A 218 DFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI---M 294 (437)
T ss_dssp CCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---H
T ss_pred chhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhh---h
Confidence 99999876655544445568999999999987 567899999999999999999999999765433222111 0
Q ss_pred HHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 004155 642 ILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTS--RPSMSSVVS 692 (771)
Q Consensus 642 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~ 692 (771)
.... ...+... .......+.+++.+|+..+|++ ||++.|+++
T Consensus 295 ~~~~--------~~~~p~~-~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 295 NHKE--------RFQFPTQ-VTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp THHH--------HCCCCSS-CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred hccc--------cccCCcc-cccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 0000 0001000 0112345788999999888888 999999987
No 39
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=9e-42 Score=385.01 Aligned_cols=260 Identities=28% Similarity=0.435 Sum_probs=213.5
Q ss_pred HHhcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEE
Q 004155 418 AATNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 418 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 497 (771)
...++|.+.+.||+|+||.||+|...+++.||||+++... ...+.|.+|+.++++++||||+++++++. .+..++|||
T Consensus 185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 3456788899999999999999988888999999997643 35678999999999999999999999986 567899999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCC
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 577 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~ 577 (771)
|+++|+|.+++.... ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 263 ~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~ 337 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDN 337 (454)
T ss_dssp CCTTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred ecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence 999999999995432 23688999999999999999999998 8999999999999999999999999999876543
Q ss_pred CcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhh
Q 004155 578 NTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKR 656 (771)
Q Consensus 578 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 656 (771)
.........+|..|+|||++....++.++|||||||++|||+| |+.||......+... .+...
T Consensus 338 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~----------------~i~~~ 401 (454)
T 1qcf_A 338 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR----------------ALERG 401 (454)
T ss_dssp HHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH----------------HHHHT
T ss_pred ceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHH----------------HHHcC
Confidence 2222233456788999999999999999999999999999999 999997543322211 11111
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 657 LGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 657 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
.....+......+.+++.+||+.||++|||+.+|+++|+.....
T Consensus 402 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 402 YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 11122223445688999999999999999999999999987543
No 40
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=8.3e-42 Score=373.07 Aligned_cols=269 Identities=25% Similarity=0.368 Sum_probs=215.6
Q ss_pred CCHHHHHHHhcCCCCCCccccCCceeEEEEE------cCCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcC-CCCcEEeE
Q 004155 411 FTLRQIKAATNNFAPDNKIGEGGFGPVYKGH------MADGTVVAVKQLSSKS-KQGNREFVNEIGMISAL-QHPNLVKL 482 (771)
Q Consensus 411 ~~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~------~~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l 482 (771)
+...+.+...++|.+.+.||+|+||.||+|. ..+++.||||+++... ....+.+.+|++++.++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 4556666678899999999999999999995 3456899999997643 34456799999999999 79999999
Q ss_pred EEEEEeCC-EEEEEEEeccCCCHHHHhcCCCcc-----------------------------------------------
Q 004155 483 HGCCIEGN-QLLLIYEYMENNSLARALFGPEAH----------------------------------------------- 514 (771)
Q Consensus 483 ~~~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~~----------------------------------------------- 514 (771)
++++.+.+ ..++||||+++|+|.+++......
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 99998754 489999999999999999654321
Q ss_pred ---------------CCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCCc
Q 004155 515 ---------------RLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT 579 (771)
Q Consensus 515 ---------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 579 (771)
...+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 12289999999999999999999998 899999999999999999999999999986644332
Q ss_pred -ccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhc
Q 004155 580 -HISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRL 657 (771)
Q Consensus 580 -~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 657 (771)
.......||+.|+|||++.+..++.++|||||||++|||+| |+.||......+... ..+....
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~---------------~~~~~~~ 313 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC---------------RRLKEGT 313 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH---------------HHHHHTC
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHH---------------HHHHcCC
Confidence 22344568999999999999999999999999999999998 999997654332211 1111111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 658 GSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 658 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
....+......+.+++.+||+.||++||++.|+++.|+.+
T Consensus 314 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 353 (359)
T 3vhe_A 314 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353 (359)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 1112222334688999999999999999999999999864
No 41
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.6e-41 Score=363.79 Aligned_cols=248 Identities=26% Similarity=0.335 Sum_probs=205.0
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccC---ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSK---SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 495 (771)
.++|++.+.||+|+||.||+|.. .+|+.||+|+++.. .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 35788999999999999999954 57999999999753 233456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|||+++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 84 MEYANGGELFFHLS----RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EECCTTCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 99999999999993 235789999999999999999999998 89999999999999999999999999998643
Q ss_pred CCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 576 EDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 576 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........... +...
T Consensus 157 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~---------------i~~~ 220 (337)
T 1o6l_A 157 SDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL---------------ILME 220 (337)
T ss_dssp CTTC-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---------------HHHC
T ss_pred cCCC-cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHH---------------HHcC
Confidence 3222 23446799999999999999999999999999999999999999975433221110 1111
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRP-----SMSSVVS 692 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 692 (771)
.. .++......+.+++.+||+.||++|| ++.|+++
T Consensus 221 ~~--~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 221 EI--RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp CC--CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CC--CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 11 12222334578999999999999999 8998876
No 42
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=9.4e-41 Score=364.70 Aligned_cols=248 Identities=23% Similarity=0.335 Sum_probs=205.2
Q ss_pred HhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChh------cHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQ------GNREFVNEIGMISALQHPNLVKLHGCCIEGNQ 491 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 491 (771)
..++|.+.+.||+|+||.||+|. ..+|+.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 35678999999999999999995 457999999999764321 35789999999999999999999999999999
Q ss_pred EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCC----CeEEEe
Q 004155 492 LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL----NPKISD 567 (771)
Q Consensus 492 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~D 567 (771)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++ .+||+|
T Consensus 90 ~~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp EEEEEECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 9999999999999999943 34799999999999999999999998 899999999999998777 799999
Q ss_pred ecCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhC
Q 004155 568 FGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQG 647 (771)
Q Consensus 568 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 647 (771)
||+++....... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||......+....
T Consensus 163 FG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~----------- 229 (361)
T 2yab_A 163 FGLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN----------- 229 (361)
T ss_dssp CSSCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH-----------
T ss_pred cCCceEcCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-----------
Confidence 999987654322 2345799999999999999999999999999999999999999976443222110
Q ss_pred ChhHHhhhhcCCCCCHH----HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 648 NLMELVDKRLGSNFDKE----QVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 648 ~~~~~~d~~l~~~~~~~----~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
+.... ..++.+ ....+.+++.+||..||++|||+.|+++
T Consensus 230 ----i~~~~--~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 230 ----ITAVS--YDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp ----HHTTC--CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ----HHhcC--CCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00000 011111 1245789999999999999999999986
No 43
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-41 Score=367.84 Aligned_cols=263 Identities=30% Similarity=0.477 Sum_probs=212.2
Q ss_pred HhcCCCCCCccccCCceeEEEEEcC------CCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHMA------DGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQ 491 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 491 (771)
..++|.+.+.||+|+||.||+|... +++.||||+++... ....+.+.+|+.++++++||||+++++++.+.+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 4578899999999999999999653 45899999997653 3446789999999999999999999999999999
Q ss_pred EEEEEEeccCCCHHHHhcCCCcc--------------------CCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCC
Q 004155 492 LLLIYEYMENNSLARALFGPEAH--------------------RLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIK 551 (771)
Q Consensus 492 ~~lV~E~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlk 551 (771)
.++||||+++|+|.+++...... ...+++.+++.++.||+.||+|||++ +|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 99999999999999999543211 25799999999999999999999998 89999999
Q ss_pred CCcEEEcCCCCeEEEeecCccccCCCCc-ccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCC
Q 004155 552 ATNVLLDKDLNPKISDFGLAKLDEEDNT-HISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKP 629 (771)
Q Consensus 552 p~NIll~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~ 629 (771)
|+||+++.++.+||+|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999986543321 12234568899999999999999999999999999999999 999997543
Q ss_pred ccchhhHHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 630 KEDIFYLLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
..+... . ...+.. ...+......+.+++.+||+.||++||++.++++.|+++...
T Consensus 282 ~~~~~~------~-~~~~~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 282 HEEVIY------Y-VRDGNI---------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp HHHHHH------H-HHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred hHHHHH------H-HhCCCc---------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 322111 0 011111 112223345688999999999999999999999999987543
No 44
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=6.5e-42 Score=376.82 Aligned_cols=256 Identities=26% Similarity=0.395 Sum_probs=208.4
Q ss_pred hcCCCCCCccccCCceeEEEEEcC-CCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMA-DGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 497 (771)
.++|.+.+.||+|+||.||+|... +++.||||+++... ......|.+|+.++++++||||+++++++...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 457888899999999999999664 78999999987543 3334578899999999999999999999999899999999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCC
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 577 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~ 577 (771)
|+++|+|.+++.. ....+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 193 ~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 193 LVQGGDFLTFLRT---EGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp CCTTCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred cCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence 9999999999943 234689999999999999999999998 8999999999999999999999999999865432
Q ss_pred Ccccc-cccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 578 NTHIS-TRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 578 ~~~~~-~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
..... ....+++.|+|||.+.++.++.++|||||||++|||+| |+.||......... +.+..
T Consensus 267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~----------------~~~~~ 330 (377)
T 3cbl_A 267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR----------------EFVEK 330 (377)
T ss_dssp EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHH----------------HHHHT
T ss_pred ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH----------------HHHHc
Confidence 21111 12235778999999998999999999999999999998 99999754332211 11111
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
......+...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 331 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 372 (377)
T 3cbl_A 331 GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372 (377)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 111122223345688999999999999999999999999864
No 45
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.6e-40 Score=352.99 Aligned_cols=263 Identities=19% Similarity=0.220 Sum_probs=212.0
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeCCEEEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISAL-QHPNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E 497 (771)
.++|++.+.||+|+||.||+|. ..+|+.||||++.... ....+.+|+.+++++ +|+|++++++++.+....++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 4678999999999999999995 4679999999986543 234578899999999 79999999999999999999999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCC-----eEEEeecCcc
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN-----PKISDFGLAK 572 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~DFGla~ 572 (771)
|+ +++|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+||+++.++. +||+|||+++
T Consensus 87 ~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 87 LL-GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred ec-CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 99 99999999432 34699999999999999999999998 8999999999999987776 9999999998
Q ss_pred ccCCCCcc------cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhh
Q 004155 573 LDEEDNTH------ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQ 646 (771)
Q Consensus 573 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 646 (771)
........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....................
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQS 239 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccC
Confidence 76543321 123457999999999999999999999999999999999999999875443332222222211111
Q ss_pred CChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 647 GNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 647 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
....+ +.... ...+.+++.+||+.||++||++.+|++.|+++...
T Consensus 240 ~~~~~-----~~~~~----~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 240 TPLRE-----LCAGF----PEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp SCHHH-----HTTTS----CHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ccHHH-----HHhhC----cHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 11111 11122 34588999999999999999999999999886543
No 46
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2e-41 Score=385.96 Aligned_cols=258 Identities=25% Similarity=0.409 Sum_probs=214.7
Q ss_pred hcCCCCCCccccCCceeEEEEEcC-CCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEe
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMA-DGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEY 498 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 498 (771)
.++|.+.++||+|+||.||+|... ++..||||+++... ...++|.+|+.++++++||||++++++|.+.+..++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 456788899999999999999664 48899999997643 3467899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCC
Q 004155 499 MENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 578 (771)
Q Consensus 499 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~ 578 (771)
+++|+|.+++.... ...+++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 298 ~~~g~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 372 (495)
T 1opk_A 298 MTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372 (495)
T ss_dssp CTTCBHHHHHHHSC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred cCCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence 99999999995432 34689999999999999999999998 89999999999999999999999999998765443
Q ss_pred cccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhc
Q 004155 579 THISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRL 657 (771)
Q Consensus 579 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 657 (771)
........+|+.|+|||++.+..++.++|||||||++|||+| |+.||......... +.+....
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~----------------~~~~~~~ 436 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY----------------ELLEKDY 436 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH----------------HHHHTTC
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHH----------------HHHHcCC
Confidence 333333456789999999999999999999999999999999 99999765433221 1122222
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 004155 658 GSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRAD 699 (771)
Q Consensus 658 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 699 (771)
....+......+.+++.+||+.||++||++.+|+++|+.+..
T Consensus 437 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 437 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 222233344568899999999999999999999999998653
No 47
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.2e-40 Score=359.77 Aligned_cols=261 Identities=19% Similarity=0.197 Sum_probs=210.8
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeCCEEEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISAL-QHPNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E 497 (771)
.++|++.+.||+|+||.||+|. ..+|+.||||++..... ...+.+|+.+++++ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 4678899999999999999995 46799999999875432 24688999999999 89999999999999999999999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCC-----eEEEeecCcc
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN-----PKISDFGLAK 572 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~DFGla~ 572 (771)
|+ +++|.+++... ...+++..++.|+.||+.||+|||+. +|+||||||+|||++.++. +||+|||+++
T Consensus 86 ~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 86 LL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred eC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 99 99999999432 35799999999999999999999998 8999999999999998887 9999999998
Q ss_pred ccCCCCcc------cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhh
Q 004155 573 LDEEDNTH------ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQ 646 (771)
Q Consensus 573 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 646 (771)
........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....................
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~ 238 (330)
T 2izr_A 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA 238 (330)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHH
T ss_pred eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhcc
Confidence 76443321 123467999999999999999999999999999999999999999875544433322222111111
Q ss_pred CChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 004155 647 GNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRAD 699 (771)
Q Consensus 647 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 699 (771)
... ..+... .+ .+.+++..||+.||.+||++.+|++.|+....
T Consensus 239 ~~~-----~~~~~~----~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~ 281 (330)
T 2izr_A 239 TPI-----EVLCEN----FP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFD 281 (330)
T ss_dssp SCH-----HHHTTT----CH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred CCH-----HHHhcc----Ch-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 111 111111 12 68899999999999999999999999986543
No 48
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.1e-41 Score=357.97 Aligned_cols=261 Identities=26% Similarity=0.375 Sum_probs=201.5
Q ss_pred HhcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHc--CCCCcEEeEEEEEEeC----CEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISA--LQHPNLVKLHGCCIEG----NQL 492 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~----~~~ 492 (771)
..++|++.+.||+|+||.||+|.. +|+.||||++... ....+..|.+++.. ++||||+++++++... ...
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 356889999999999999999977 6899999998653 34556667777666 7999999999997642 468
Q ss_pred EEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhh--------hcCCCceeccCCCCCcEEEcCCCCeE
Q 004155 493 LLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLH--------EESRLKIVHRDIKATNVLLDKDLNPK 564 (771)
Q Consensus 493 ~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH--------~~~~~~ivH~Dlkp~NIll~~~~~~k 564 (771)
++||||+++|+|.+++. ...+++..+++++.||+.||+||| +. +|+||||||+|||++.++.+|
T Consensus 82 ~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp EEEECCCTTCBHHHHHT-----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEE
T ss_pred EEehhhccCCCHHHHHh-----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEE
Confidence 99999999999999993 346899999999999999999999 65 899999999999999999999
Q ss_pred EEeecCccccCCCCccc---ccccccCCCccchhhhccC------CCCchHhHHHHHHHHHHHHhC----------CCCC
Q 004155 565 ISDFGLAKLDEEDNTHI---STRVAGTFGYMAPEYAMRG------YLTDKADVYSFGIVALEIVSG----------RSNS 625 (771)
Q Consensus 565 l~DFGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~ksDV~S~Gvil~elltG----------~~p~ 625 (771)
|+|||+++......... .....||+.|+|||++.+. .++.++|||||||++|||+|| +.||
T Consensus 154 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf 233 (301)
T 3q4u_A 154 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233 (301)
T ss_dssp ECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccc
Confidence 99999998655433221 2234799999999999876 455799999999999999999 8888
Q ss_pred CCCCccchhhHHHHHHHHHhhCChhHHhhhhcCC-CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 626 SCKPKEDIFYLLDWALILKAQGNLMELVDKRLGS-NFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
.......... ............ .+.+.. .........+.+++.+||+.||++|||+.||++.|+++
T Consensus 234 ~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 234 YDVVPNDPSF-EDMRKVVCVDQQ-----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTSCSSCCH-HHHHHHHTTSCC-----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cccCCCCcch-hhhhHHHhccCC-----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 6533222111 000000000000 000000 01234667899999999999999999999999999753
No 49
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.8e-41 Score=352.77 Aligned_cols=253 Identities=28% Similarity=0.475 Sum_probs=196.9
Q ss_pred hcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCCh----hcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSK----QGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 495 (771)
.++|+..+.||+|+||.||+|... |+.||||+++.... ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357888999999999999999864 89999999875422 2356789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcC--------CCCeEEEe
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDK--------DLNPKISD 567 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~--------~~~~kl~D 567 (771)
|||+++++|.+++. ...+++..++.++.|++.||+|||+.+..+|+||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 99999999999993 347899999999999999999999983233999999999999986 77899999
Q ss_pred ecCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhC
Q 004155 568 FGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQG 647 (771)
Q Consensus 568 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 647 (771)
||+++....... ....||+.|+|||.+.+..++.++||||||+++|||++|+.||..........
T Consensus 160 fg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~------------ 224 (271)
T 3dtc_A 160 FGLAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY------------ 224 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH------------
T ss_pred CCcccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH------------
Confidence 999986544322 23468999999999999999999999999999999999999997543221110
Q ss_pred ChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 004155 648 NLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEG 696 (771)
Q Consensus 648 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 696 (771)
...........+......+.+++.+||+.||++||++.|+++.|+.
T Consensus 225 ---~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 225 ---GVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp ---HHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred ---hhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 1111111122223334568899999999999999999999999986
No 50
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-41 Score=373.15 Aligned_cols=262 Identities=27% Similarity=0.420 Sum_probs=213.0
Q ss_pred hcCCCCCCccccCCceeEEEEEc--------CCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeC
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM--------ADGTVVAVKQLSSKS-KQGNREFVNEIGMISAL-QHPNLVKLHGCCIEG 489 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~--------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 489 (771)
.++|.+.++||+|+||.||+|.. ..++.||||+++... ....+.+.+|+++++++ +||||+++++++.+.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 46788899999999999999964 234689999997653 34457899999999999 899999999999999
Q ss_pred CEEEEEEEeccCCCHHHHhcCCCc------------cCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEE
Q 004155 490 NQLLLIYEYMENNSLARALFGPEA------------HRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLL 557 (771)
Q Consensus 490 ~~~~lV~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll 557 (771)
+..++||||+++|+|.+++..... ....+++..++.|+.||+.||+|||+. +|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 999999999999999999954331 124699999999999999999999998 89999999999999
Q ss_pred cCCCCeEEEeecCccccCCCCc-ccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhh
Q 004155 558 DKDLNPKISDFGLAKLDEEDNT-HISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFY 635 (771)
Q Consensus 558 ~~~~~~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~ 635 (771)
+.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+..
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~- 303 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF- 303 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-
Confidence 9999999999999986654332 22233457889999999999999999999999999999999 99999754432211
Q ss_pred HHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 636 LLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
+.+........+......+.+++.+||+.||++||++.||++.|+.+...
T Consensus 304 ---------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 353 (382)
T 3tt0_A 304 ---------------KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353 (382)
T ss_dssp ---------------HHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---------------HHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 11111111122223345688999999999999999999999999887543
No 51
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.7e-41 Score=380.80 Aligned_cols=259 Identities=28% Similarity=0.439 Sum_probs=206.9
Q ss_pred HhcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEe
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEY 498 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 498 (771)
..++|.+.++||+|+||.||+|...++..||||+++... ...+.|.+|+.++++++||||+++++++.+ +..++||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 346788889999999999999988778889999997643 345789999999999999999999999876 678999999
Q ss_pred ccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCC
Q 004155 499 MENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 578 (771)
Q Consensus 499 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~ 578 (771)
+++|+|.+++... ....+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 260 ~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 334 (452)
T 1fmk_A 260 MSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334 (452)
T ss_dssp CTTCBHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred hcCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence 9999999999432 224689999999999999999999998 89999999999999999999999999998765433
Q ss_pred cccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhc
Q 004155 579 THISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRL 657 (771)
Q Consensus 579 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 657 (771)
........+|..|+|||.+.+..++.++|||||||++|||++ |+.||......+... .+....
T Consensus 335 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~----------------~i~~~~ 398 (452)
T 1fmk_A 335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD----------------QVERGY 398 (452)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH----------------HHHTTC
T ss_pred eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHH----------------HHHcCC
Confidence 222233457889999999999999999999999999999999 999997543322111 111111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 658 GSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 658 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
....+......+.+++.+||+.||++|||+.+++++|+.....
T Consensus 399 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 399 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 1122233445688999999999999999999999999987644
No 52
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=372.16 Aligned_cols=263 Identities=27% Similarity=0.367 Sum_probs=210.4
Q ss_pred hcCCCCCCccccCCceeEEEEEc------CCCcEEEEEEcccC-ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM------ADGTVVAVKQLSSK-SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQL 492 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 492 (771)
.++|.+.++||+|+||.||+|.. .+++.||||+++.. .......+.+|+.++++++||||+++++++.+....
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 35788899999999999999974 24678999999754 344566789999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhcCCC---ccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCC---CeEEE
Q 004155 493 LLIYEYMENNSLARALFGPE---AHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL---NPKIS 566 (771)
Q Consensus 493 ~lV~E~~~~gsL~~~l~~~~---~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~ 566 (771)
++||||+++|+|.+++.... .....+++.+++.++.||+.||+|||+. +|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999995432 2234689999999999999999999998 899999999999999555 59999
Q ss_pred eecCccccCCCC-cccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHH
Q 004155 567 DFGLAKLDEEDN-THISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILK 644 (771)
Q Consensus 567 DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 644 (771)
|||+++...... ........||+.|+|||++.+..++.++|||||||++|||++ |+.||......+...
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~--------- 297 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE--------- 297 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH---------
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH---------
Confidence 999997543222 112233567899999999999999999999999999999998 999997544322111
Q ss_pred hhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCCC
Q 004155 645 AQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADVQ 701 (771)
Q Consensus 645 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 701 (771)
.+........+......+.+++.+||+.||++||++.||++.|+......
T Consensus 298 -------~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 298 -------FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp -------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred -------HHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 11111111222233456889999999999999999999999998765443
No 53
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.8e-41 Score=361.22 Aligned_cols=251 Identities=22% Similarity=0.307 Sum_probs=204.4
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCCh------hcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSK------QGNREFVNEIGMISALQHPNLVKLHGCCIEGNQL 492 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 492 (771)
.++|.+.+.||+|+||.||+|.. .+|+.||+|++..... ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 45688999999999999999954 5689999999875422 1367899999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCC----CeEEEee
Q 004155 493 LLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL----NPKISDF 568 (771)
Q Consensus 493 ~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~DF 568 (771)
++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 90 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 999999999999999943 34699999999999999999999998 899999999999998887 8999999
Q ss_pred cCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCC
Q 004155 569 GLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGN 648 (771)
Q Consensus 569 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 648 (771)
|+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+..... ......
T Consensus 163 g~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~-----~~~~~~ 235 (326)
T 2y0a_A 163 GLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV-----SAVNYE 235 (326)
T ss_dssp TTCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH-----HHTCCC
T ss_pred CCCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHH-----HhcCCC
Confidence 99987654322 23456999999999999999999999999999999999999999754332211100 000000
Q ss_pred hhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 649 LMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 649 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
... . ... .....+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~---~-~~~----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 236 FED---E-YFS----NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CCH---H-HHT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cCc---c-ccc----cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000 0 001 11245789999999999999999999987
No 54
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.9e-41 Score=363.61 Aligned_cols=252 Identities=28% Similarity=0.368 Sum_probs=201.6
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCCh-hcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSK-QGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 497 (771)
.++|++.+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 46899999999999999999954 4789999999865432 234678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCC
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 577 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~ 577 (771)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 86 YCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp CCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred cCCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 9999999999843 34699999999999999999999998 8999999999999999999999999999865432
Q ss_pred Cc-ccccccccCCCccchhhhccCCC-CchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 578 NT-HISTRVAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 578 ~~-~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
.. .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||......... ...|. ..
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~~~~----~~--------- 224 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-YSDWK----EK--------- 224 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHH-HHHHH----TT---------
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHH-HHHHh----cc---------
Confidence 22 22334679999999999987765 78999999999999999999999764432211 11110 00
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.............+.+++.+||+.||++|||+.|+++
T Consensus 225 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 225 KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0000111122345778999999999999999999986
No 55
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.4e-40 Score=356.29 Aligned_cols=266 Identities=23% Similarity=0.318 Sum_probs=203.3
Q ss_pred HhcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCCh--hcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSK--QGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
..++|++.++||+|+||+||+|...+|+.||+|++..... .....+.+|++++++++||||+++++++.+.+..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 3467899999999999999999888899999999875432 23467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 576 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~ 576 (771)
||+++ +|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 99 e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 99 EFMEK-DLKKVLDEN---KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp ECCSE-EHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred cCCCC-CHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 99985 888888443 34689999999999999999999998 899999999999999999999999999987654
Q ss_pred CCcccccccccCCCccchhhhcc-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhH----
Q 004155 577 DNTHISTRVAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLME---- 651 (771)
Q Consensus 577 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 651 (771)
.... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+...................
T Consensus 172 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 250 (311)
T 3niz_A 172 PVRS-YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL 250 (311)
T ss_dssp CCC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTS
T ss_pred Cccc-ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhcc
Confidence 3222 233568999999999876 5689999999999999999999999986554433221110000000000000
Q ss_pred --HhhhhcC--CCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 652 --LVDKRLG--SNFD-----KEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 652 --~~d~~l~--~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
..+.... .... .....++.+++.+||+.||++|||+.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred chhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000000 0000 011245789999999999999999999987
No 56
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.7e-41 Score=358.79 Aligned_cols=258 Identities=25% Similarity=0.405 Sum_probs=215.8
Q ss_pred HHhcCCCCCCccccCCceeEEEEEcC-CCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 418 AATNNFAPDNKIGEGGFGPVYKGHMA-DGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 418 ~~~~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
...++|++.+.||+|+||.||+|... ++..||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 35678889999999999999999554 58899999997543 34678999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 576 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~ 576 (771)
||+++++|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 89 e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp ECCTTEEHHHHHHHCC--TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred EcCCCCcHHHHHHhcc--cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence 9999999999995432 34689999999999999999999998 899999999999999999999999999987765
Q ss_pred CCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 577 DNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 577 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
..........+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||.......... .+..
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~----------------~~~~ 227 (288)
T 3kfa_A 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE----------------LLEK 227 (288)
T ss_dssp SSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH----------------HHHT
T ss_pred CccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH----------------HHhc
Confidence 54444445567889999999999999999999999999999999 999997654333211 1111
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
......+......+.+++.+|++.||++||++.|+++.|+..
T Consensus 228 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 222222233345688999999999999999999999999874
No 57
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.1e-41 Score=359.36 Aligned_cols=247 Identities=19% Similarity=0.298 Sum_probs=205.4
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEe
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEY 498 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 498 (771)
.++|.+.+.||+|+||.||+|. ..+|+.||+|++.... .....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 4688999999999999999995 4568999999987543 3456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcC--CCCeEEEeecCccccCC
Q 004155 499 MENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDK--DLNPKISDFGLAKLDEE 576 (771)
Q Consensus 499 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~DFGla~~~~~ 576 (771)
+++|+|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 83 ~~g~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 83 ISGLDIFERINTS---AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCCBHHHHHTSS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred CCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 9999999999432 34699999999999999999999998 8999999999999987 78999999999987654
Q ss_pred CCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhh
Q 004155 577 DNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKR 656 (771)
Q Consensus 577 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 656 (771)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+... .+....
T Consensus 157 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~---------------~i~~~~ 219 (321)
T 1tki_A 157 GDN--FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIE---------------NIMNAE 219 (321)
T ss_dssp TCE--EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH---------------HHHHTC
T ss_pred CCc--cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHH---------------HHHcCC
Confidence 332 234568999999999999889999999999999999999999997644322111 011111
Q ss_pred cCCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 657 LGSNFDK----EQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 657 l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
. .++. .....+.+++.+||+.||++|||+.|+++
T Consensus 220 ~--~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 220 Y--TFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp C--CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred C--CCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0 1111 12346889999999999999999999997
No 58
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=4.7e-41 Score=354.37 Aligned_cols=256 Identities=25% Similarity=0.340 Sum_probs=196.7
Q ss_pred HhcCCCCCCccccCCceeEEEEEcC----CCcEEEEEEcccC-ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHMA----DGTVVAVKQLSSK-SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLL 493 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 493 (771)
..++|++.+.||+|+||.||+|... .+..||+|++... .....+.+.+|+.++++++||||+++++++. ++..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 3467888999999999999999653 2567999998764 3344667999999999999999999999984 56789
Q ss_pred EEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccc
Q 004155 494 LIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 573 (771)
Q Consensus 494 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~ 573 (771)
+||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 92 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEEECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccc
Confidence 999999999999999432 34689999999999999999999998 899999999999999999999999999987
Q ss_pred cCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHH
Q 004155 574 DEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMEL 652 (771)
Q Consensus 574 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (771)
.............+|+.|+|||.+.+..++.++|||||||++|||++ |+.||......+....+
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i--------------- 230 (281)
T 1mp8_A 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI--------------- 230 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH---------------
T ss_pred cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHH---------------
Confidence 65543333334457889999999999999999999999999999997 99999765443321111
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 653 VDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 653 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
........+......+.+++.+||+.||++||++.|+++.|+.+
T Consensus 231 -~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 274 (281)
T 1mp8_A 231 -ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274 (281)
T ss_dssp -HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -HcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 00001112223345688999999999999999999999999874
No 59
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=3.9e-41 Score=363.28 Aligned_cols=256 Identities=27% Similarity=0.449 Sum_probs=202.8
Q ss_pred cCCCCCCccccCCceeEEEEEc-CCCc----EEEEEEcccC-ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHM-ADGT----VVAVKQLSSK-SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLL 494 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~----~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 494 (771)
++|+..++||+|+||.||+|.. .+|+ +||+|.+... .....+.+.+|+.++++++||||++++++|.+.. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 5688899999999999999964 3444 3688887643 3345678999999999999999999999998755 789
Q ss_pred EEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCcccc
Q 004155 495 IYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 574 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~ 574 (771)
|+||+++|+|.+++... ...+++..++.|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 94 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEECCTTCBHHHHHHHS---TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred EEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 99999999999999542 34699999999999999999999998 8999999999999999999999999999876
Q ss_pred CCCCcc-cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHH
Q 004155 575 EEDNTH-ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMEL 652 (771)
Q Consensus 575 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (771)
...... ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||......... ..
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~----------------~~ 231 (327)
T 3poz_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----------------SI 231 (327)
T ss_dssp TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH----------------HH
T ss_pred cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHH----------------HH
Confidence 543322 2233457889999999999999999999999999999999 99999765443321 11
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 004155 653 VDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRAD 699 (771)
Q Consensus 653 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 699 (771)
+........+......+.+++.+||+.||++||++.|+++.|+.+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 232 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp HHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred HHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 22221122233344568899999999999999999999999987543
No 60
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=4.9e-41 Score=359.63 Aligned_cols=259 Identities=30% Similarity=0.437 Sum_probs=211.8
Q ss_pred hcCCCCCCccccCCceeEEEEEc------CCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM------ADGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQL 492 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 492 (771)
.++|.+.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 56788899999999999999954 345899999997643 34457889999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhcCCCc--------------------cCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCC
Q 004155 493 LLIYEYMENNSLARALFGPEA--------------------HRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKA 552 (771)
Q Consensus 493 ~lV~E~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp 552 (771)
++||||+++|+|.+++..... ....+++.+++.++.||+.||+|||++ +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 999999999999999964332 123489999999999999999999998 899999999
Q ss_pred CcEEEcCCCCeEEEeecCccccCCCCcc-cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCc
Q 004155 553 TNVLLDKDLNPKISDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPK 630 (771)
Q Consensus 553 ~NIll~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~ 630 (771)
+||+++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999999876543322 2233457889999999999999999999999999999999 9999976554
Q ss_pred cchhhHHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 631 EDIFYLLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
...... +........+......+.+++.+||+.||++||++.|+++.|+.+
T Consensus 259 ~~~~~~----------------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~ 309 (314)
T 2ivs_A 259 ERLFNL----------------LKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309 (314)
T ss_dssp GGHHHH----------------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHH----------------hhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 332211 111111122223345688999999999999999999999999875
No 61
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.4e-40 Score=351.61 Aligned_cols=253 Identities=30% Similarity=0.521 Sum_probs=203.6
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCChhc-------HHHHHHHHHHHHcCCCCcEEeEEEEEEeCCE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSKQG-------NREFVNEIGMISALQHPNLVKLHGCCIEGNQ 491 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~-------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 491 (771)
.++|++.+.||+|+||.||+|.. .+++.||+|++....... .+.+.+|+.++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 46788899999999999999954 578999999986543221 167899999999999999999999987655
Q ss_pred EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCc--eeccCCCCCcEEEcCCCC-----eE
Q 004155 492 LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLK--IVHRDIKATNVLLDKDLN-----PK 564 (771)
Q Consensus 492 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~--ivH~Dlkp~NIll~~~~~-----~k 564 (771)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||++ + |+||||||+||+++.++. +|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred -eEEEEecCCCCHHHHHhcc---cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEE
Confidence 6999999999999988543 34799999999999999999999998 6 999999999999988776 99
Q ss_pred EEeecCccccCCCCcccccccccCCCccchhhhc--cCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHH
Q 004155 565 ISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAM--RGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALI 642 (771)
Q Consensus 565 l~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~ 642 (771)
|+|||+++..... .....||+.|+|||++. ...++.++|||||||++|||++|+.||.......... .. .
T Consensus 170 l~Dfg~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~---~ 241 (287)
T 4f0f_A 170 VADFGLSQQSVHS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF-IN---M 241 (287)
T ss_dssp ECCCTTCBCCSSC----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH-HH---H
T ss_pred eCCCCcccccccc----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH-HH---H
Confidence 9999999854332 23456999999999984 4567899999999999999999999997654332211 11 1
Q ss_pred HHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 643 LKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 643 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
..........+......+.+++.+||+.||++||++.|+++.|+++
T Consensus 242 ---------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 242 ---------IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ---------HHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ---------HhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 1111112222333445688999999999999999999999999863
No 62
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.5e-41 Score=376.62 Aligned_cols=257 Identities=20% Similarity=0.277 Sum_probs=209.0
Q ss_pred HHHHHHHhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEe
Q 004155 413 LRQIKAATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLHGCCIE 488 (771)
Q Consensus 413 ~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 488 (771)
+++++...++|.+.++||+|+||.||+|.. .+++.||+|++++.. ......+.+|+.+++.++||||++++++|.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 455666778999999999999999999954 568999999986521 1223457889999999999999999999999
Q ss_pred CCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEee
Q 004155 489 GNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDF 568 (771)
Q Consensus 489 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 568 (771)
.+..|+||||+++|+|.+++. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~-----~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMS-----NYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEeCCCCCcHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEecc
Confidence 999999999999999999993 24689999999999999999999998 8999999999999999999999999
Q ss_pred cCccccCCCCcccccccccCCCccchhhhccCC----CCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHH
Q 004155 569 GLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGY----LTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILK 644 (771)
Q Consensus 569 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~ 644 (771)
|+|+..............||+.|+|||++.+.. ++.++|||||||++|||++|++||......+....
T Consensus 213 G~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~-------- 284 (410)
T 3v8s_A 213 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK-------- 284 (410)
T ss_dssp TTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH--------
T ss_pred ceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHH--------
Confidence 999877655443444567999999999998654 78999999999999999999999976543322111
Q ss_pred hhCChhHHhhhh--cCCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 004155 645 AQGNLMELVDKR--LGSNFDKEQVMVMINVALLCTDVSSTS--RPSMSSVVS 692 (771)
Q Consensus 645 ~~~~~~~~~d~~--l~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~ 692 (771)
++... +.-.........+.+++.+||+.+|++ ||++.||++
T Consensus 285 -------i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 285 -------IMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp -------HHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred -------HHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 11110 000000112345788999999999988 999999987
No 63
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.7e-41 Score=351.84 Aligned_cols=255 Identities=26% Similarity=0.421 Sum_probs=210.3
Q ss_pred cCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEecc
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEYME 500 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 500 (771)
++|++.+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 5688889999999999999988788999999997643 335689999999999999999999999999999999999999
Q ss_pred CCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCCcc
Q 004155 501 NNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTH 580 (771)
Q Consensus 501 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~~~ 580 (771)
+++|.+++... ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++........
T Consensus 87 ~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 160 (267)
T 3t9t_A 87 HGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 160 (267)
T ss_dssp TCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCcHHHHHhhC---cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccc
Confidence 99999999432 24689999999999999999999998 8999999999999999999999999999866543222
Q ss_pred cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhcCC
Q 004155 581 ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRLGS 659 (771)
Q Consensus 581 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 659 (771)
......+|..|+|||.+.+..++.++||||||+++|||++ |+.||......+... ... .....
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~------~i~----------~~~~~ 224 (267)
T 3t9t_A 161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE------DIS----------TGFRL 224 (267)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH------HHH----------TTCCC
T ss_pred ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHH------HHh----------cCCcC
Confidence 2334457789999999998999999999999999999999 899997543322111 000 01111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 004155 660 NFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRA 698 (771)
Q Consensus 660 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 698 (771)
..+......+.+++.+||+.||++||++.|+++.|+++.
T Consensus 225 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (267)
T 3t9t_A 225 YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 263 (267)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 112223346889999999999999999999999998753
No 64
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=355.18 Aligned_cols=272 Identities=19% Similarity=0.248 Sum_probs=212.6
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCC--EEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEGN--QLLLI 495 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV 495 (771)
.++|.+.++||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 35788999999999999999954 458999999997543 234677889999999999999999999998765 78999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEE----cCCCCeEEEeecCc
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLL----DKDLNPKISDFGLA 571 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DFGla 571 (771)
|||+++++|.+++..... ...+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 88 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EeCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 999999999999965432 23499999999999999999999998 89999999999999 78888999999999
Q ss_pred cccCCCCcccccccccCCCccchhhhc--------cCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccch-hhHHHHHHH
Q 004155 572 KLDEEDNTHISTRVAGTFGYMAPEYAM--------RGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDI-FYLLDWALI 642 (771)
Q Consensus 572 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~ 642 (771)
+........ ....||+.|+|||++. +..++.++|||||||++|||++|+.||........ .........
T Consensus 164 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 164 RELEDDEQF--VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp EECCTTCCB--CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred eecCCCCce--eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 876544322 3456999999999986 57889999999999999999999999975433221 111111111
Q ss_pred HHhhCChhHH---------hhhhc--CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 643 LKAQGNLMEL---------VDKRL--GSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 643 ~~~~~~~~~~---------~d~~l--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
......+..+ ....+ ...........+.+++.+||+.||++||++.|+++...+.
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 1110000000 00011 1234567777899999999999999999999999987764
No 65
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4.2e-41 Score=366.49 Aligned_cols=249 Identities=22% Similarity=0.359 Sum_probs=200.2
Q ss_pred HhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccC---ChhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeCCEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSK---SKQGNREFVNEIGMISAL-QHPNLVKLHGCCIEGNQLL 493 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 493 (771)
..++|++.++||+|+||.||+|. ..+|+.||||+++.. .....+.+.+|..+++.+ +||||+++++++.+.+..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 34789999999999999999995 456899999999753 223456788999999988 6999999999999999999
Q ss_pred EEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccc
Q 004155 494 LIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 573 (771)
Q Consensus 494 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~ 573 (771)
+||||+++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.
T Consensus 101 lv~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQ----KSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceee
Confidence 9999999999999993 235699999999999999999999998 899999999999999999999999999985
Q ss_pred cCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHh
Q 004155 574 DEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELV 653 (771)
Q Consensus 574 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (771)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+... .+.
T Consensus 174 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~---------------~i~ 237 (353)
T 3txo_A 174 GICNG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFE---------------AIL 237 (353)
T ss_dssp SCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---------------HHH
T ss_pred cccCC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHH---------------HHH
Confidence 43322 22344679999999999998889999999999999999999999997654332211 111
Q ss_pred hhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 004155 654 DKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSM------SSVVS 692 (771)
Q Consensus 654 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~ 692 (771)
.... .++......+.+++.+||+.||++||++ .|+++
T Consensus 238 ~~~~--~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 238 NDEV--VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp HCCC--CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred cCCC--CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1111 1222233457889999999999999998 66665
No 66
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.6e-41 Score=355.12 Aligned_cols=249 Identities=24% Similarity=0.324 Sum_probs=196.1
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCCh--------------------------hcHHHHHHHHHHHH
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSK--------------------------QGNREFVNEIGMIS 472 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--------------------------~~~~~~~~E~~~l~ 472 (771)
.++|++.+.||+|+||.||+|. ..+|+.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 3678899999999999999995 45789999999865421 11356889999999
Q ss_pred cCCCCcEEeEEEEEEe--CCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCC
Q 004155 473 ALQHPNLVKLHGCCIE--GNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDI 550 (771)
Q Consensus 473 ~l~h~niv~l~~~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dl 550 (771)
+++||||+++++++.+ .+..++||||+++++|.+++ ....+++..+..++.||+.||+|||+. +|+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-----TLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS-----CSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence 9999999999999986 57899999999999998765 234799999999999999999999998 8999999
Q ss_pred CCCcEEEcCCCCeEEEeecCccccCCCCcccccccccCCCccchhhhccCC---CCchHhHHHHHHHHHHHHhCCCCCCC
Q 004155 551 KATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGY---LTDKADVYSFGIVALEIVSGRSNSSC 627 (771)
Q Consensus 551 kp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~ksDV~S~Gvil~elltG~~p~~~ 627 (771)
||+||+++.++.+||+|||+++........ .....||+.|+|||.+.+.. .+.++|||||||++|||++|+.||..
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDAL-LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSSCE-ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CHHHEEECCCCCEEEecCCCcccccccccc-ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 999999999999999999999876543322 23457999999999997654 47899999999999999999999975
Q ss_pred CCccchhhHHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 628 KPKEDIFYLLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
...... . .... ...............+.+++.+||+.||++||++.|+++
T Consensus 243 ~~~~~~---~---~~~~---------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 243 ERIMCL---H---SKIK---------SQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp SSHHHH---H---HHHH---------HCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccHHHH---H---HHHh---------cccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 432111 1 1111 111100111122345889999999999999999999874
No 67
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.5e-40 Score=364.21 Aligned_cols=271 Identities=19% Similarity=0.229 Sum_probs=210.3
Q ss_pred HhcCCCCCCccccCCceeEEEEEcCC------CcEEEEEEcccCChhc-----------HHHHHHHHHHHHcCCCCcEEe
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHMAD------GTVVAVKQLSSKSKQG-----------NREFVNEIGMISALQHPNLVK 481 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~ 481 (771)
..++|.+.++||+|+||.||+|...+ ++.||||++....... ...+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 35678999999999999999996644 4789999987654211 123445666777889999999
Q ss_pred EEEEEEeC----CEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEE
Q 004155 482 LHGCCIEG----NQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLL 557 (771)
Q Consensus 482 l~~~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll 557 (771)
+++++... ...++||||+ +++|.+++.. ....+++..++.|+.||+.||+|||+. +|+||||||+|||+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~---~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill 185 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA---NAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEE
Confidence 99998764 4689999999 9999999943 235799999999999999999999998 89999999999999
Q ss_pred c--CCCCeEEEeecCccccCCCCccc------ccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Q 004155 558 D--KDLNPKISDFGLAKLDEEDNTHI------STRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKP 629 (771)
Q Consensus 558 ~--~~~~~kl~DFGla~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~ 629 (771)
+ .++.+||+|||+++......... .....||+.|+|||++.+..++.++|||||||++|||+||+.||....
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~ 265 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL 265 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 9 88999999999998765432211 123459999999999999999999999999999999999999997533
Q ss_pred ccchhhHHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCCCC
Q 004155 630 KEDIFYLLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADVQD 702 (771)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 702 (771)
.... ...+.. ......+.+++++.+... ..+..+.+++..||+.||++||++.++++.|+.+.....
T Consensus 266 ~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 266 KDPK--YVRDSK-IRYRENIASLMDKCFPAA---NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp TCHH--HHHHHH-HHHHHCHHHHHHHHSCTT---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred cCHH--HHHHHH-HHhhhhHHHHHHHhcccc---cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 2221 111111 112234556666665321 123458889999999999999999999999987654433
No 68
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-40 Score=365.50 Aligned_cols=252 Identities=21% Similarity=0.294 Sum_probs=206.8
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEe
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEY 498 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 498 (771)
.++|++.+.||+|+||.||+|. ..+|+.||+|++..........+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 4679999999999999999995 457899999999876666667899999999999999999999999999999999999
Q ss_pred ccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcC--CCCeEEEeecCccccCC
Q 004155 499 MENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDK--DLNPKISDFGLAKLDEE 576 (771)
Q Consensus 499 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~DFGla~~~~~ 576 (771)
+++|+|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 130 ~~gg~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 130 LSGGELFDRIAAE---DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp CCCCBHHHHTTCT---TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred CCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 9999999999432 24689999999999999999999998 8999999999999974 57899999999987654
Q ss_pred CCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhh
Q 004155 577 DNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKR 656 (771)
Q Consensus 577 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 656 (771)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. . ...... ..
T Consensus 204 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~---~---~i~~~~-------~~ 268 (387)
T 1kob_A 204 DEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL---Q---NVKRCD-------WE 268 (387)
T ss_dssp TSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH---H---HHHHCC-------CC
T ss_pred Ccc--eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHH---H---HHHhCC-------CC
Confidence 332 23346999999999999999999999999999999999999999754322211 1 000000 00
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 657 LGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 657 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
............+.+++.+||+.||++|||+.|+++
T Consensus 269 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 269 FDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp CCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 011111122346889999999999999999999987
No 69
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.1e-40 Score=363.31 Aligned_cols=255 Identities=21% Similarity=0.302 Sum_probs=203.8
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCC-----hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKS-----KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLL 493 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 493 (771)
.++|++.+.||+|+||.||+|. ..+|+.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 3578899999999999999994 4579999999986421 124678999999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCC---eEEEeecC
Q 004155 494 LIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN---PKISDFGL 570 (771)
Q Consensus 494 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DFGl 570 (771)
+||||+++|+|.+++.........+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 99999999999988854333344689999999999999999999998 8999999999999986654 99999999
Q ss_pred ccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChh
Q 004155 571 AKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLM 650 (771)
Q Consensus 571 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (771)
++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .... ... .+...
T Consensus 180 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~---~i~-~~~~~ 250 (351)
T 3c0i_A 180 AIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE----RLFE---GII-KGKYK 250 (351)
T ss_dssp CEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH----HHHH---HHH-HTCCC
T ss_pred eeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH----HHHH---HHH-cCCCC
Confidence 987654332 22345799999999999999999999999999999999999999975321 1111 000 00000
Q ss_pred HHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 651 ELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 651 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
..+..... ....+.+++.+||+.||++||++.|+++
T Consensus 251 --~~~~~~~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 251 --MNPRQWSH----ISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp --CCHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --CCcccccc----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00000011 1346789999999999999999999986
No 70
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.1e-41 Score=365.32 Aligned_cols=274 Identities=27% Similarity=0.376 Sum_probs=213.9
Q ss_pred cCCCCCCccccCCceeEEEEE-----cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEE--eCCEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGH-----MADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCI--EGNQLL 493 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~-----~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~ 493 (771)
++|++.+.||+|+||.||+|. ..+++.||||++........+.+.+|++++++++||||+++++++. +....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 578889999999999999997 3468899999998777667788999999999999999999999987 456799
Q ss_pred EEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccc
Q 004155 494 LIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 573 (771)
Q Consensus 494 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~ 573 (771)
+||||+++++|.+++... ...+++..++.|+.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 103 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred EEEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccccee
Confidence 999999999999999432 23699999999999999999999998 899999999999999999999999999987
Q ss_pred cCCCCcc--cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhH
Q 004155 574 DEEDNTH--ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLME 651 (771)
Q Consensus 574 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (771)
....... ......||..|+|||++.+..++.++|||||||++|||++|+.||.....+.. ....+.........+.+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~ 255 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL-RMMGCERDVPALSRLLE 255 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH-HHCC----CCHHHHHHH
T ss_pred cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhh-hhcccccccccHHHHHH
Confidence 6543322 22334688889999999999999999999999999999999999864221100 00000000000001122
Q ss_pred HhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCCC
Q 004155 652 LVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADVQ 701 (771)
Q Consensus 652 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 701 (771)
.+........+......+.+++.+||+.||++||++.|+++.|+.+....
T Consensus 256 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 256 LLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred HhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 22222222333444567899999999999999999999999999875543
No 71
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.9e-40 Score=362.87 Aligned_cols=253 Identities=22% Similarity=0.331 Sum_probs=204.7
Q ss_pred HHhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEE
Q 004155 418 AATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLL 494 (771)
Q Consensus 418 ~~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 494 (771)
...++|.+.+.||+|+||.||+|. ..+|+.||+|++... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 345789999999999999999995 457899999999754 23345678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCC---CCeEEEeecCc
Q 004155 495 IYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKD---LNPKISDFGLA 571 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DFGla 571 (771)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||++
T Consensus 106 v~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a 178 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 178 (362)
T ss_dssp EECCCCSCBHHHHHTT----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence 9999999999999943 34689999999999999999999998 89999999999999765 45999999999
Q ss_pred cccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhH
Q 004155 572 KLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLME 651 (771)
Q Consensus 572 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (771)
+....... .....||+.|+|||++.+..++.++|||||||++|||++|++||......... .. .. .+..
T Consensus 179 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~---~~---i~-~~~~-- 247 (362)
T 2bdw_A 179 IEVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY---AQ---IK-AGAY-- 247 (362)
T ss_dssp BCCTTCCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---HH---HH-HTCC--
T ss_pred eEecCCcc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH---HH---HH-hCCC--
Confidence 86654322 23457999999999999999999999999999999999999999754322211 10 00 0100
Q ss_pred HhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 652 LVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 652 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.............+.+++.+||+.||++||++.|+++
T Consensus 248 ----~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 248 ----DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp ----CCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ----CCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0000000122345789999999999999999999986
No 72
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=8.6e-41 Score=359.63 Aligned_cols=265 Identities=23% Similarity=0.392 Sum_probs=197.7
Q ss_pred HHhcCCCCCCccccCCceeEEEEEcCC-C---cEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCE
Q 004155 418 AATNNFAPDNKIGEGGFGPVYKGHMAD-G---TVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQ 491 (771)
Q Consensus 418 ~~~~~f~~~~~lG~G~~g~Vy~~~~~~-g---~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 491 (771)
...++|++.+.||+|+||.||+|.... + ..||||+++.. .....+.+.+|++++++++||||+++++++...+.
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 345689999999999999999996543 2 27999999764 33446789999999999999999999999987765
Q ss_pred E------EEEEEeccCCCHHHHhcCCC--ccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCe
Q 004155 492 L------LLIYEYMENNSLARALFGPE--AHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNP 563 (771)
Q Consensus 492 ~------~lV~E~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 563 (771)
. ++||||+++|+|.+++.... .....+++..++.|+.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 5 99999999999999984322 2223689999999999999999999998 89999999999999999999
Q ss_pred EEEeecCccccCCCCcc-cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHH
Q 004155 564 KISDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWAL 641 (771)
Q Consensus 564 kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~ 641 (771)
||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||......+....
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~----- 251 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNY----- 251 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH-----
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHH-----
Confidence 99999999866443321 2233457789999999999999999999999999999999 9999976544332111
Q ss_pred HHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCCC
Q 004155 642 ILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADVQ 701 (771)
Q Consensus 642 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 701 (771)
+.. ......+......+.+++.+||+.||++||++.++++.|+++...+
T Consensus 252 ----------~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 252 ----------LIG-GNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp ----------HHT-TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ----------Hhc-CCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 010 1111222233456889999999999999999999999999875543
No 73
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.8e-40 Score=354.82 Aligned_cols=260 Identities=28% Similarity=0.432 Sum_probs=202.3
Q ss_pred hcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 497 (771)
.++|.+.++||+|+||.||+|... ..+|+|+++.. .....+.+.+|+.++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 357888999999999999999764 36899988753 3344578999999999999999999999875 456899999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCC
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 577 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~ 577 (771)
|+++++|.+++... ...+++.+++.|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred cCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 99999999999543 34799999999999999999999998 8999999999999999999999999999865432
Q ss_pred -CcccccccccCCCccchhhhc---cCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHh
Q 004155 578 -NTHISTRVAGTFGYMAPEYAM---RGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELV 653 (771)
Q Consensus 578 -~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (771)
.........||+.|+|||++. +..++.++|||||||++|||++|+.||......+... . ....+. .
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~--~----~~~~~~----~ 255 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII--F----MVGRGY----A 255 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH--H----HHHHTC----C
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHH--H----HHhcCC----C
Confidence 222233457999999999986 6678999999999999999999999997644332211 0 001110 0
Q ss_pred hhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 004155 654 DKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRAD 699 (771)
Q Consensus 654 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 699 (771)
.+.+ ..........+.+++.+||+.+|++||++.|+++.|+....
T Consensus 256 ~~~~-~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~ 300 (307)
T 3lb7_A 256 SPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp CCCS-TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHT
T ss_pred Ccch-hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHh
Confidence 0111 11112234568899999999999999999999999887543
No 74
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.2e-40 Score=350.54 Aligned_cols=256 Identities=30% Similarity=0.450 Sum_probs=209.8
Q ss_pred hcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEec
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEYM 499 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 499 (771)
.++|++.+.||+|+||.||+|...+++.||||++.... ...+.+.+|++++++++||||+++++++. .+..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 46788899999999999999988888899999987543 34678999999999999999999999986 45689999999
Q ss_pred cCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCCc
Q 004155 500 ENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT 579 (771)
Q Consensus 500 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~~ 579 (771)
++++|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 90 ENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp TTCBHHHHTTSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred CCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 999999999432 123689999999999999999999998 899999999999999999999999999987765443
Q ss_pred ccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhcC
Q 004155 580 HISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRLG 658 (771)
Q Consensus 580 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 658 (771)
.......+|..|+|||.+.+..++.++||||||+++|||++ |+.||......+... . +.....
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~------~----------~~~~~~ 228 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ------N----------LERGYR 228 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH------H----------HHTTCC
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHH------H----------HhcccC
Confidence 33344557889999999998899999999999999999999 999997543322111 0 011111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 004155 659 SNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRA 698 (771)
Q Consensus 659 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 698 (771)
...+......+.+++.+|++.||++||++.++++.|+...
T Consensus 229 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 229 MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 1112223456889999999999999999999999998753
No 75
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.2e-40 Score=348.50 Aligned_cols=251 Identities=22% Similarity=0.337 Sum_probs=204.5
Q ss_pred cCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCC--hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeC--CEEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLHGCCIEG--NQLLLIY 496 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~ 496 (771)
++|.+.+.||+|+||.||+|... |+.||||+++... ....+.+.+|+.++++++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 56888999999999999999874 8999999987642 34456799999999999999999999999876 7889999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCc--eeccCCCCCcEEEcCCCCeEEEeecCcccc
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLK--IVHRDIKATNVLLDKDLNPKISDFGLAKLD 574 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~DFGla~~~ 574 (771)
||+++|+|.+++.... ...+++..++.++.||+.||+|||+. + |+||||||+||+++.++.++|+|||++...
T Consensus 89 e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp ECCTTCBHHHHHHSCS--SCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred cccCCCcHHHHHhhcc--cCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 9999999999996432 23689999999999999999999997 6 999999999999999999999999987643
Q ss_pred CCCCcccccccccCCCccchhhhccCCCC---chHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhH
Q 004155 575 EEDNTHISTRVAGTFGYMAPEYAMRGYLT---DKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLME 651 (771)
Q Consensus 575 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (771)
.. ....||+.|+|||.+.+...+ .++|||||||++|||++|+.||......... ..
T Consensus 164 ~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---------------~~ 222 (271)
T 3kmu_A 164 QS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG---------------MK 222 (271)
T ss_dssp SC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHH---------------HH
T ss_pred cc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHH---------------HH
Confidence 22 224589999999999875444 4899999999999999999999754332211 01
Q ss_pred HhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 004155 652 LVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRA 698 (771)
Q Consensus 652 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 698 (771)
..........+......+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 223 VALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp HHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 11111112222233456889999999999999999999999998754
No 76
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.3e-40 Score=356.31 Aligned_cols=261 Identities=28% Similarity=0.450 Sum_probs=212.3
Q ss_pred HhcCCCCCCccccCCceeEEEEEc------CCCcEEEEEEcccCCh-hcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeCC
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHM------ADGTVVAVKQLSSKSK-QGNREFVNEIGMISAL-QHPNLVKLHGCCIEGN 490 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 490 (771)
..++|.+.+.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|+.+++++ +||||+++++++.+.+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 346788899999999999999963 3578999999976533 3457899999999999 9999999999999999
Q ss_pred EEEEEEEeccCCCHHHHhcCCCc--------------cCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEE
Q 004155 491 QLLLIYEYMENNSLARALFGPEA--------------HRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVL 556 (771)
Q Consensus 491 ~~~lV~E~~~~gsL~~~l~~~~~--------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIl 556 (771)
..++||||+++|+|.+++..... ....+++..++.++.||+.||+|||+. +|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEE
Confidence 99999999999999999954321 123589999999999999999999998 8999999999999
Q ss_pred EcCCCCeEEEeecCccccCCCCcc-cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchh
Q 004155 557 LDKDLNPKISDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIF 634 (771)
Q Consensus 557 l~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~ 634 (771)
++.++.+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||+| |+.||.........
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~ 257 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 257 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH
Confidence 999999999999999876544332 2233457889999999999999999999999999999999 99999765433221
Q ss_pred hHHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 635 YLLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
. ..+........+......+.+++.+||+.||.+||++.|+++.|++.
T Consensus 258 ~---------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 305 (313)
T 1t46_A 258 Y---------------KMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305 (313)
T ss_dssp H---------------HHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred H---------------HHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 1 11111111111222345688999999999999999999999999874
No 77
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.2e-40 Score=373.17 Aligned_cols=251 Identities=29% Similarity=0.428 Sum_probs=206.5
Q ss_pred hcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCC-EEEEEEEe
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGN-QLLLIYEY 498 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lV~E~ 498 (771)
.++|++.++||+|+||.||+|... |+.||||+++... ..+.|.+|+.++++++||||+++++++.+.+ ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 456888899999999999999874 7899999997643 4568999999999999999999999988765 79999999
Q ss_pred ccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCC
Q 004155 499 MENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 578 (771)
Q Consensus 499 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~ 578 (771)
+++|+|.+++... ....+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 269 ~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 343 (450)
T 1k9a_A 269 MAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 343 (450)
T ss_dssp CTTCBHHHHHHHH--CTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred cCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc
Confidence 9999999999532 223479999999999999999999998 89999999999999999999999999998543221
Q ss_pred cccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhc
Q 004155 579 THISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRL 657 (771)
Q Consensus 579 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 657 (771)
....+|..|+|||++.+..++.++|||||||++|||+| |+.||......+... .+....
T Consensus 344 ----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~----------------~i~~~~ 403 (450)
T 1k9a_A 344 ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP----------------RVEKGY 403 (450)
T ss_dssp -------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHH----------------HHHTTC
T ss_pred ----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH----------------HHHcCC
Confidence 22357889999999999999999999999999999998 999997654433211 111111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 004155 658 GSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRA 698 (771)
Q Consensus 658 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 698 (771)
....+......+.+++.+||+.||++|||+.++++.|+.+.
T Consensus 404 ~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 404 KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 12223334456889999999999999999999999998753
No 78
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.2e-41 Score=363.53 Aligned_cols=264 Identities=28% Similarity=0.408 Sum_probs=210.4
Q ss_pred HhcCCCCCCccccCCceeEEEEEc------CCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeCC
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHM------ADGTVVAVKQLSSKS-KQGNREFVNEIGMISAL-QHPNLVKLHGCCIEGN 490 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 490 (771)
..++|.+.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 346788999999999999999964 346789999997542 23456789999999999 8999999999999999
Q ss_pred EEEEEEEeccCCCHHHHhcCCCcc-------------------CCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCC
Q 004155 491 QLLLIYEYMENNSLARALFGPEAH-------------------RLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIK 551 (771)
Q Consensus 491 ~~~lV~E~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlk 551 (771)
..++||||+++|+|.+++...... ...+++..++.++.||+.||+|||+. +|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 999999999999999999654321 13489999999999999999999998 89999999
Q ss_pred CCcEEEcCCCCeEEEeecCccccCCCCcc-cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCC
Q 004155 552 ATNVLLDKDLNPKISDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKP 629 (771)
Q Consensus 552 p~NIll~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~ 629 (771)
|+||+++.++.+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 99999999999999999999866443322 2234567889999999999999999999999999999998 999997654
Q ss_pred ccchhhHHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 630 KEDIFYLLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
...... ..+........+......+.+++.+||+.||.+||++.|+++.|+.....
T Consensus 280 ~~~~~~---------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 280 VDANFY---------------KLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp CSHHHH---------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred cHHHHH---------------HHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 332211 11111111222223345688999999999999999999999999886543
No 79
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=361.67 Aligned_cols=250 Identities=22% Similarity=0.319 Sum_probs=198.5
Q ss_pred hcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCC--CcEEeEEEEEEeCCEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQH--PNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lV 495 (771)
.++|++.+.||+|+||.||++...+++.||||++... .....+.+.+|+.++.+++| |||+++++++.+.+..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 4568899999999999999998888999999998654 33445788999999999976 9999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|| +.+++|.+++.. ...+++.++..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++...
T Consensus 88 ~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EC-CCSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred Ee-CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 99 567899999943 35789999999999999999999998 899999999999997 5789999999998765
Q ss_pred CCCcc-cccccccCCCccchhhhcc-----------CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHH
Q 004155 576 EDNTH-ISTRVAGTFGYMAPEYAMR-----------GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALIL 643 (771)
Q Consensus 576 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~ 643 (771)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---------- 228 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---------- 228 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH----------
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH----------
Confidence 43322 2334579999999999865 6789999999999999999999999964322110
Q ss_pred HhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 644 KAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 644 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.+..++++.....++......+.+++.+||+.||++|||+.|+++
T Consensus 229 ----~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 229 ----KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp ----HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----HHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 112223333222333233346889999999999999999999986
No 80
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=8.1e-41 Score=359.28 Aligned_cols=266 Identities=28% Similarity=0.404 Sum_probs=208.6
Q ss_pred CCCCCccccCCceeEEEEEc-----CCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEe--CCEEEE
Q 004155 423 FAPDNKIGEGGFGPVYKGHM-----ADGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIE--GNQLLL 494 (771)
Q Consensus 423 f~~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 494 (771)
|++.++||+|+||.||++.+ .+|+.||||+++... ....+.+.+|++++++++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 37889999999999988853 368899999997653 3446779999999999999999999999987 468899
Q ss_pred EEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCcccc
Q 004155 495 IYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 574 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~ 574 (771)
||||+++|+|.+++. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 113 v~e~~~~~~L~~~l~-----~~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLP-----RHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EECCCTTCBHHHHGG-----GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEecccCCcHHHHHh-----hCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccc
Confidence 999999999999993 23599999999999999999999998 8999999999999999999999999999877
Q ss_pred CCCCcc--cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHH
Q 004155 575 EEDNTH--ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMEL 652 (771)
Q Consensus 575 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (771)
...... ......||..|+|||++.+..++.++||||||+++|||++|+.||....... .....+.........+.+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF-LELIGIAQGQMTVLRLTEL 263 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH-HHHHCSCCHHHHHHHHHHH
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhh-hhhhcccccchhHHHHHHH
Confidence 554322 2234567888999999999899999999999999999999999986421110 0000000000011112233
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 653 VDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 653 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
++.......+......+.+++.+||+.||++||++.|+++.|+.+
T Consensus 264 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l 308 (318)
T 3lxp_A 264 LERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308 (318)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 333333333344456789999999999999999999999999875
No 81
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-40 Score=355.52 Aligned_cols=244 Identities=25% Similarity=0.362 Sum_probs=203.3
Q ss_pred cCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
++|++.+.||+|+||.||+|.. .+|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 5788999999999999999954 579999999987532 234567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 576 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~ 576 (771)
||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 86 DYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp CCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 99999999999943 34689999999999999999999998 899999999999999999999999999986543
Q ss_pred CCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhh
Q 004155 577 DNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKR 656 (771)
Q Consensus 577 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 656 (771)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..++...
T Consensus 159 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---------------~~i~~~~ 219 (318)
T 1fot_A 159 V----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY---------------EKILNAE 219 (318)
T ss_dssp C----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH---------------HHHHHCC
T ss_pred c----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH---------------HHHHhCC
Confidence 2 23457999999999999999999999999999999999999999754322211 1111111
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 004155 657 LGSNFDKEQVMVMINVALLCTDVSSTSRP-----SMSSVVS 692 (771)
Q Consensus 657 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 692 (771)
. .++......+.+++.+|++.||++|| ++.|+++
T Consensus 220 ~--~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 220 L--RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp C--CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred C--CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 1 11222234578999999999999999 8888874
No 82
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=370.76 Aligned_cols=253 Identities=21% Similarity=0.307 Sum_probs=204.5
Q ss_pred HhcCCCCCCccccCCceeEEEE-EcCCCcEEEEEEcccCC--hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKG-HMADGTVVAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 495 (771)
..++|++.+.||+|+||.||+| ...+|+.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 4578999999999999999999 45679999999987643 23456789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEc---CCCCeEEEeecCcc
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLD---KDLNPKISDFGLAK 572 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DFGla~ 572 (771)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++ .++.+||+|||+++
T Consensus 89 ~E~~~gg~L~~~i~~----~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 89 FDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp ECCCBCCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 999999999999843 35699999999999999999999998 899999999999998 56789999999998
Q ss_pred ccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHH
Q 004155 573 LDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMEL 652 (771)
Q Consensus 573 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (771)
........ .....||+.|+|||++.+..++.++|||||||++|+|++|++||......+....+ . .+..
T Consensus 162 ~~~~~~~~-~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i------~-~~~~--- 230 (444)
T 3soa_A 162 EVEGEQQA-WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI------K-AGAY--- 230 (444)
T ss_dssp CCCTTCCB-CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH------H-HTCC---
T ss_pred EecCCCce-eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHH------H-hCCC---
Confidence 66543322 23467999999999999999999999999999999999999999754332221110 0 0000
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 653 VDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 653 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.............+.+++.+||+.||++|||+.|+++
T Consensus 231 ---~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 231 ---DFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp ---CCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ---CCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000000122345889999999999999999999987
No 83
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.4e-40 Score=350.90 Aligned_cols=262 Identities=20% Similarity=0.289 Sum_probs=200.4
Q ss_pred cCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC--hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 497 (771)
++|++.++||+|+||+||+|.. .+|+.||||++.... ......+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 5788999999999999999954 568999999987543 2335778899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCC
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 577 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~ 577 (771)
|+++ ++.+.+.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSE-EHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCC-CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9986 56555532 235799999999999999999999998 8999999999999999999999999999876543
Q ss_pred CcccccccccCCCccchhhhccCC-CCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhh---CChhHHh
Q 004155 578 NTHISTRVAGTFGYMAPEYAMRGY-LTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQ---GNLMELV 653 (771)
Q Consensus 578 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 653 (771)
.. ......||+.|+|||++.+.. ++.++|||||||++|||++|+.|+....... ............ .......
T Consensus 155 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~ 231 (292)
T 3o0g_A 155 VR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD--DQLKRIFRLLGTPTEEQWPSMT 231 (292)
T ss_dssp CS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHH--HHHHHHHHHHCCCCTTTCTTGG
T ss_pred cc-cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHHhCCCChhhhhhhc
Confidence 22 223456899999999998765 8999999999999999999988865432211 111111111110 0000000
Q ss_pred ---hhhc---------CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 654 ---DKRL---------GSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 654 ---d~~l---------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
+... ...........+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000 00011123346789999999999999999999986
No 84
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.5e-41 Score=373.94 Aligned_cols=263 Identities=21% Similarity=0.253 Sum_probs=209.3
Q ss_pred CCHHHHHHHhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCCCCcEEeEEEEE
Q 004155 411 FTLRQIKAATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLHGCC 486 (771)
Q Consensus 411 ~~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 486 (771)
+.+++++...++|++.++||+|+||.||+|.. .+|+.||||++++.. ......+.+|..++..++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 44566666788999999999999999999954 579999999996532 12234578899999999999999999999
Q ss_pred EeCCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEE
Q 004155 487 IEGNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKIS 566 (771)
Q Consensus 487 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 566 (771)
.+.+..|+||||+++|+|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++++||+
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~ 204 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLA 204 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEe
Confidence 9999999999999999999999432 24799999999999999999999998 89999999999999999999999
Q ss_pred eecCccccCCCCcccccccccCCCccchhhhc-------cCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHH
Q 004155 567 DFGLAKLDEEDNTHISTRVAGTFGYMAPEYAM-------RGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDW 639 (771)
Q Consensus 567 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~ 639 (771)
|||+++..............||+.|+|||++. ...++.++|||||||++|||++|+.||......+....+
T Consensus 205 DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i-- 282 (412)
T 2vd5_A 205 DFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI-- 282 (412)
T ss_dssp CCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH--
T ss_pred echhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHH--
Confidence 99999877654443344567999999999987 357899999999999999999999999765433221111
Q ss_pred HHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCC---CCHHHHHH
Q 004155 640 ALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSR---PSMSSVVS 692 (771)
Q Consensus 640 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Ps~~evl~ 692 (771)
......- .+ ..........+.+++.+||. +|++| |+++|+++
T Consensus 283 -~~~~~~~--------~~-p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 283 -VHYKEHL--------SL-PLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp -HTHHHHC--------CC-C----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred -HhcccCc--------CC-CccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 0000000 00 00111223457889999999 99998 58999876
No 85
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.4e-40 Score=353.47 Aligned_cols=261 Identities=24% Similarity=0.373 Sum_probs=191.2
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCCh-hcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSK-QGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 497 (771)
.++|++.+.||+|+||.||+|.. .+|+.||+|+++.... .....+.+|+.++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 46789999999999999999954 4689999999875432 234678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcCCC--ccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 498 YMENNSLARALFGPE--AHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|++ |+|.+++.... .....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999884321 1224689999999999999999999998 89999999999999999999999999998765
Q ss_pred CCCcccccccccCCCccchhhhcc-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhh--------
Q 004155 576 EDNTHISTRVAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQ-------- 646 (771)
Q Consensus 576 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~-------- 646 (771)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+ ......
T Consensus 160 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i---~~~~~~~~~~~~~~ 235 (317)
T 2pmi_A 160 IPVNT-FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI---FDIMGTPNESLWPS 235 (317)
T ss_dssp SCCCC-CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---HHHHCSCCTTTCGG
T ss_pred CCccc-CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH---HHHhCCCChhHhhh
Confidence 33222 233568999999999976 46899999999999999999999999765443322111 111000
Q ss_pred ----------------CChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 647 ----------------GNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 647 ----------------~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
..+.+.+.+...... ...+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPL----DGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGGCTTCCTTCCCCCCCCSHHHHGGGCSSCC----CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhhcccccccccchhHHHhhcccccccC----CHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 001111111111122 235889999999999999999999875
No 86
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=363.77 Aligned_cols=249 Identities=23% Similarity=0.347 Sum_probs=204.1
Q ss_pred cCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
++|.+.+.||+|+||.||+|. ..+|+.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 578899999999999999995 4568999999986532 234567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 576 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~ 576 (771)
||+.+|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 95 e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp CCCTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 99999999999943 34699999999999999999999998 899999999999999999999999999987654
Q ss_pred CCcccccccccCCCccchhhhcc---CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHh
Q 004155 577 DNTHISTRVAGTFGYMAPEYAMR---GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELV 653 (771)
Q Consensus 577 ~~~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (771)
.. ......||+.|+|||++.. ..++.++|||||||++|||++|+.||...............
T Consensus 168 ~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~------------- 232 (384)
T 4fr4_A 168 ET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF------------- 232 (384)
T ss_dssp TC--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHH-------------
T ss_pred CC--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHH-------------
Confidence 32 2244679999999999874 45899999999999999999999999764433322221110
Q ss_pred hhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 004155 654 DKRLGSNFDKEQVMVMINVALLCTDVSSTSRPS-MSSVVS 692 (771)
Q Consensus 654 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~ 692 (771)
... ...++......+.+++.+||+.||++||+ +.++.+
T Consensus 233 ~~~-~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 233 ETT-VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HHC-CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred hhc-ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 000 11222233456889999999999999998 677664
No 87
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.2e-40 Score=349.38 Aligned_cols=262 Identities=25% Similarity=0.352 Sum_probs=200.1
Q ss_pred cCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCCh--hcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEe
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSK--QGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEY 498 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 498 (771)
++|++.+.||+|+||.||+|...+|+.||+|++..... .....+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57889999999999999999877899999999865432 2346788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCC
Q 004155 499 MENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 578 (771)
Q Consensus 499 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~ 578 (771)
+++ +|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 986 999998542 24689999999999999999999998 89999999999999999999999999998654322
Q ss_pred cccccccccCCCccchhhhccC-CCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhh--CChhHH---
Q 004155 579 THISTRVAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQ--GNLMEL--- 652 (771)
Q Consensus 579 ~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--- 652 (771)
.. .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+... ......... ......
T Consensus 155 ~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 231 (288)
T 1ob3_A 155 RK-YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM--RIFRILGTPNSKNWPNVTEL 231 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHHHCCCCTTTSTTGGGS
T ss_pred cc-cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHHHCCCChhhchhhhcc
Confidence 21 2334689999999999764 58999999999999999999999997644322211 111110000 000000
Q ss_pred --hhhhcCC-------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 653 --VDKRLGS-------NFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 653 --~d~~l~~-------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.++.... .........+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000000 000112345789999999999999999999986
No 88
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.6e-41 Score=360.87 Aligned_cols=245 Identities=25% Similarity=0.310 Sum_probs=192.5
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC--hhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeCCEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS--KQGNREFVNEIGMISAL-QHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 495 (771)
.++|++.++||+|+||+||+|.. .+|+.||||++.... ......+..|+..+.++ +||||++++++|.+++..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 36799999999999999999965 479999999986532 23344556666666555 899999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|||+ +++|.+++... ...+++..++.|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 136 ~e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred Eecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 9999 67999988432 34699999999999999999999998 89999999999999999999999999998664
Q ss_pred CCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 576 EDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 576 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
.... .....||+.|+|||++.+ .++.++|||||||++|||++|..|+.... . |. ....+....
T Consensus 209 ~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~---~-----~~--~~~~~~~~~---- 271 (311)
T 3p1a_A 209 TAGA--GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE---G-----WQ--QLRQGYLPP---- 271 (311)
T ss_dssp --------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH---H-----HH--HHTTTCCCH----
T ss_pred cCCC--CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc---H-----HH--HHhccCCCc----
Confidence 4322 234569999999998876 78999999999999999999977664211 0 00 001111111
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.+... ....+.+++.+||+.||++|||+.|+++
T Consensus 272 ~~~~~----~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 272 EFTAG----LSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccccC----CCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11111 2346889999999999999999999986
No 89
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.6e-40 Score=364.69 Aligned_cols=250 Identities=22% Similarity=0.325 Sum_probs=198.0
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeCCEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS---KQGNREFVNEIGMISAL-QHPNLVKLHGCCIEGNQLLL 494 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 494 (771)
.++|++.++||+|+||.||+|.. .+++.||+|++++.. ....+.+.+|..++.++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 35788999999999999999954 568899999997642 22234578899999887 89999999999999999999
Q ss_pred EEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCcccc
Q 004155 495 IYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 574 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~ 574 (771)
||||+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+..
T Consensus 131 V~E~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEECCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEcCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 999999999999994 235799999999999999999999998 8999999999999999999999999999853
Q ss_pred CCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchh--hHHHHHHHHHhhCChhHH
Q 004155 575 EEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIF--YLLDWALILKAQGNLMEL 652 (771)
Q Consensus 575 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 652 (771)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. ....... ..+
T Consensus 204 ~~~~~-~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~--------~~i 274 (396)
T 4dc2_A 204 LRPGD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF--------QVI 274 (396)
T ss_dssp CCTTC-CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHH--------HHH
T ss_pred ccCCC-ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHH--------HHH
Confidence 32222 234567999999999999999999999999999999999999999653221110 0000000 011
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 004155 653 VDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSM 687 (771)
Q Consensus 653 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 687 (771)
.... ..++......+.+++.+||+.||++||++
T Consensus 275 ~~~~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 275 LEKQ--IRIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp HHCC--CCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred hccc--cCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1111 12222234467899999999999999996
No 90
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-41 Score=361.82 Aligned_cols=260 Identities=28% Similarity=0.383 Sum_probs=191.6
Q ss_pred hcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHc--CCCCcEEeEEEEEEeCC----EEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISA--LQHPNLVKLHGCCIEGN----QLL 493 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~ 493 (771)
.++|.+.+.||+|+||.||+|.. +|+.||||++... ....+.+|.+++.. ++||||+++++++.... ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 46799999999999999999977 4899999998653 34567788888887 78999999999998776 889
Q ss_pred EEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhh--------hcCCCceeccCCCCCcEEEcCCCCeEE
Q 004155 494 LIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLH--------EESRLKIVHRDIKATNVLLDKDLNPKI 565 (771)
Q Consensus 494 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH--------~~~~~~ivH~Dlkp~NIll~~~~~~kl 565 (771)
+||||+++|+|.+++. ...+++..++.++.|++.||+||| +. +|+||||||+|||++.++.+||
T Consensus 78 lv~e~~~~g~L~~~l~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl 149 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp EEEECCTTCCHHHHHH-----HCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-B
T ss_pred EEEeccCCCCHHHHHh-----ccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEE
Confidence 9999999999999993 346889999999999999999999 65 8999999999999999999999
Q ss_pred EeecCccccCCCCccc---ccccccCCCccchhhhccC------CCCchHhHHHHHHHHHHHHhC----------CCCCC
Q 004155 566 SDFGLAKLDEEDNTHI---STRVAGTFGYMAPEYAMRG------YLTDKADVYSFGIVALEIVSG----------RSNSS 626 (771)
Q Consensus 566 ~DFGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~ksDV~S~Gvil~elltG----------~~p~~ 626 (771)
+|||+++......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.||.
T Consensus 150 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~ 229 (303)
T 3gxj_A 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229 (303)
T ss_dssp CCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTT
T ss_pred eecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccc
Confidence 9999997654433221 2234699999999999776 444789999999999999999 56664
Q ss_pred CCCccchhhHHHHHHHHHhhCChhHHhhhhcCCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCCC
Q 004155 627 CKPKEDIFYLLDWALILKAQGNLMELVDKRLGSNFD-----KEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADVQ 701 (771)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 701 (771)
......... ......+.+..+....+ .+....+.+++.+||+.||++|||+.||+++|+.+....
T Consensus 230 ~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 230 DLVPSDPSV----------EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp TTCC-CCCC----------C-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred ccCCCCccH----------HHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 422111000 00111122222222222 256678999999999999999999999999999876543
No 91
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.7e-40 Score=356.48 Aligned_cols=251 Identities=21% Similarity=0.346 Sum_probs=197.8
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCC-------
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEGN------- 490 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 490 (771)
.++|++.+.||+|+||.||+|.. .+|+.||||+++... ....+.+.+|+.++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 46788999999999999999965 479999999997543 334678999999999999999999999986543
Q ss_pred --------------------------------------------------EEEEEEEeccCCCHHHHhcCCCccCCCCCh
Q 004155 491 --------------------------------------------------QLLLIYEYMENNSLARALFGPEAHRLKLDW 520 (771)
Q Consensus 491 --------------------------------------------------~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~ 520 (771)
..++||||+++|+|.+++..... ....++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~ 163 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDREH 163 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSCH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchhh
Confidence 38999999999999999965443 234577
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCCc-----------ccccccccCC
Q 004155 521 PTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNT-----------HISTRVAGTF 589 (771)
Q Consensus 521 ~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~~-----------~~~~~~~gt~ 589 (771)
..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....... .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 78999999999999999998 899999999999999999999999999987655421 1123356999
Q ss_pred CccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHH
Q 004155 590 GYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRLGSNFDKEQVMVM 669 (771)
Q Consensus 590 ~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l 669 (771)
.|+|||++.+..++.++|||||||++|||++|..|+. +..... .......... ........+
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~-----~~~~~~----~~~~~~~~~~---------~~~~~~~~~ 302 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM-----ERVRII----TDVRNLKFPL---------LFTQKYPQE 302 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH-----HHHHHH----HHHHTTCCCH---------HHHHHCHHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh-----HHHHHH----HHhhccCCCc---------ccccCChhH
Confidence 9999999999999999999999999999999876642 111000 0000111100 012233467
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 004155 670 INVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 670 ~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.+++.+||+.||++||++.|+++
T Consensus 303 ~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 303 HMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHHHccCCCCcCCCHHHHhh
Confidence 88999999999999999999986
No 92
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.7e-40 Score=360.49 Aligned_cols=252 Identities=22% Similarity=0.284 Sum_probs=192.7
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEe
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEY 498 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 498 (771)
.++|.+.+.||+|+||.||++.. .+|+.||||++..... ..+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 46789999999999999999954 4789999999976432 346688999999999999999999999999999999999
Q ss_pred ccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCC--eEEEeecCccccCC
Q 004155 499 MENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN--PKISDFGLAKLDEE 576 (771)
Q Consensus 499 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~DFGla~~~~~ 576 (771)
+++|+|.+++. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++....
T Consensus 98 ~~~~~L~~~l~----~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 98 ASGGELYERIC----NAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp CCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred CCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 99999999983 234699999999999999999999998 8999999999999987765 99999999974332
Q ss_pred CCcccccccccCCCccchhhhccCCCCch-HhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 577 DNTHISTRVAGTFGYMAPEYAMRGYLTDK-ADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 577 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k-sDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
.. ......||+.|+|||++.+..++.+ +|||||||++|||++|+.||........... .. ..+...
T Consensus 171 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~--~~---------~~~~~~ 237 (361)
T 3uc3_A 171 HS--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRK--TI---------QRILSV 237 (361)
T ss_dssp ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHH--HH---------HHHHTT
T ss_pred cC--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHH--HH---------HHHhcC
Confidence 22 1233569999999999988877665 8999999999999999999976433222110 00 011111
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.............+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 238 KYSIPDDIRISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp CCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 1111111112345789999999999999999999987
No 93
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.8e-41 Score=358.61 Aligned_cols=267 Identities=26% Similarity=0.373 Sum_probs=206.5
Q ss_pred cCCCCCCccccCCceeEEEEE-----cCCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeC--CEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGH-----MADGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEG--NQL 492 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~-----~~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 492 (771)
++|++.+.||+|+||.||+|. ..+++.||||++.... ....+.+.+|+.++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 457788999999999999997 3468999999997543 33457899999999999999999999999876 678
Q ss_pred EEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCcc
Q 004155 493 LLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 572 (771)
Q Consensus 493 ~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~ 572 (771)
++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 101 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPK---NKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EEEEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccc
Confidence 999999999999999943 234699999999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCcc--cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHh---hC
Q 004155 573 LDEEDNTH--ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKA---QG 647 (771)
Q Consensus 573 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~---~~ 647 (771)
........ ......||..|+|||.+.+..++.++||||||+++|||++|+.|+..... ........... ..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~ 250 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMA----LFLKMIGPTHGQMTVT 250 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH----HHHHHHCSCCGGGHHH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhh----HHhhccCCcccccCHH
Confidence 76554322 22345688889999999999999999999999999999999988642110 00000000000 00
Q ss_pred ChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 648 NLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 648 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
.+...+........+......+.+++.+||+.||.+|||+.|++++|+.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 251 RLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 11111112112222333445688999999999999999999999999864
No 94
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.3e-40 Score=361.41 Aligned_cols=250 Identities=24% Similarity=0.358 Sum_probs=203.1
Q ss_pred HHHhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeCCE
Q 004155 417 KAATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS---KQGNREFVNEIGMISAL-QHPNLVKLHGCCIEGNQ 491 (771)
Q Consensus 417 ~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 491 (771)
....++|.+.+.||+|+||.||+|.. .+|+.||||+++... ......+..|..++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 44567899999999999999999954 568999999997532 23456778899999876 89999999999999999
Q ss_pred EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCc
Q 004155 492 LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 571 (771)
Q Consensus 492 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla 571 (771)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 93 ~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a 165 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMC 165 (345)
T ss_dssp EEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhh
Confidence 9999999999999999932 34689999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhH
Q 004155 572 KLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLME 651 (771)
Q Consensus 572 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (771)
+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+
T Consensus 166 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i-------------- 230 (345)
T 1xjd_A 166 KENMLGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI-------------- 230 (345)
T ss_dssp BCCCCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--------------
T ss_pred hhcccCCC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHH--------------
Confidence 85433222 234567999999999999999999999999999999999999999764432221110
Q ss_pred HhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 004155 652 LVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMS-SVV 691 (771)
Q Consensus 652 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~-evl 691 (771)
.... ..++......+.+++.+||+.||++||++. |++
T Consensus 231 -~~~~--~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 231 -RMDN--PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp -HHCC--CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred -HhCC--CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 0000 111222334578999999999999999997 554
No 95
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=354.63 Aligned_cols=256 Identities=29% Similarity=0.467 Sum_probs=199.1
Q ss_pred cCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEecc
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEYME 500 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 500 (771)
++|++.+.||+|+||.||+|... ++.||||++... ...+.|.+|+.++++++||||+++++++. +..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence 46788899999999999999874 789999998653 34578999999999999999999999886 34799999999
Q ss_pred CCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCC-eEEEeecCccccCCCCc
Q 004155 501 NNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN-PKISDFGLAKLDEEDNT 579 (771)
Q Consensus 501 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~-~kl~DFGla~~~~~~~~ 579 (771)
+|+|.+++..... ...+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||+++......
T Consensus 83 ~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~- 160 (307)
T 2eva_A 83 GGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM- 160 (307)
T ss_dssp TCBHHHHHHCSSS-EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCHHHHHhccCC-CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc-
Confidence 9999999965432 235789999999999999999999943338999999999999998887 7999999997554321
Q ss_pred ccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhcCC
Q 004155 580 HISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRLGS 659 (771)
Q Consensus 580 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 659 (771)
....||+.|+|||++.+..++.++|||||||++|||++|+.||........ . ..|. .. .+ ...
T Consensus 161 ---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~-~~~~--~~-~~---------~~~ 223 (307)
T 2eva_A 161 ---TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF-R-IMWA--VH-NG---------TRP 223 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH-H-HHHH--HH-TT---------CCC
T ss_pred ---ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH-H-HHHH--Hh-cC---------CCC
Confidence 234589999999999999999999999999999999999999975433211 1 1111 00 01 011
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 660 NFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 660 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
.........+.+++.+||+.||++||++.|+++.|+.+...
T Consensus 224 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 264 (307)
T 2eva_A 224 PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 264 (307)
T ss_dssp CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGG
T ss_pred CcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 11122334588999999999999999999999999876543
No 96
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=3.2e-40 Score=359.34 Aligned_cols=249 Identities=24% Similarity=0.341 Sum_probs=189.0
Q ss_pred HhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 497 (771)
..++|++.+.||+|+||.||+|.. .+++.||||+++... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 457789999999999999999965 468899999997543 34678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcC---CCCeEEEeecCcccc
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDK---DLNPKISDFGLAKLD 574 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DFGla~~~ 574 (771)
|+++|+|.+++.. ...+++.++..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++..
T Consensus 129 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~ 201 (349)
T 2w4o_A 129 LVTGGELFDRIVE----KGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201 (349)
T ss_dssp CCCSCBHHHHHTT----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred eCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence 9999999999943 34689999999999999999999998 8999999999999975 889999999999865
Q ss_pred CCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhh
Q 004155 575 EEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVD 654 (771)
Q Consensus 575 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 654 (771)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ... .+..
T Consensus 202 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~------------~i~~ 265 (349)
T 2w4o_A 202 EHQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF--MFR------------RILN 265 (349)
T ss_dssp -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH--HHH------------HHHT
T ss_pred Cccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH--HHH------------HHHh
Confidence 4322 22345689999999999999999999999999999999999999975433221 110 0111
Q ss_pred hhc--CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 655 KRL--GSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 655 ~~l--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
... ...........+.+++.+||+.||++||++.|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 266 CEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 110 00111123346889999999999999999999987
No 97
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3.3e-40 Score=356.99 Aligned_cols=261 Identities=26% Similarity=0.420 Sum_probs=210.3
Q ss_pred hcCCCCCCccccCCceeEEEEEc--------CCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeC
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM--------ADGTVVAVKQLSSKS-KQGNREFVNEIGMISAL-QHPNLVKLHGCCIEG 489 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~--------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 489 (771)
.++|.+.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+++++ +||||+++++++.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 46788999999999999999964 356789999997653 34457789999999999 899999999999999
Q ss_pred CEEEEEEEeccCCCHHHHhcCCCcc------------CCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEE
Q 004155 490 NQLLLIYEYMENNSLARALFGPEAH------------RLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLL 557 (771)
Q Consensus 490 ~~~~lV~E~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll 557 (771)
+..++||||+++|+|.+++...... ...+++..++.++.||+.||+|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 9999999999999999999654321 23589999999999999999999998 89999999999999
Q ss_pred cCCCCeEEEeecCccccCCCCcc-cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhh
Q 004155 558 DKDLNPKISDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFY 635 (771)
Q Consensus 558 ~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~ 635 (771)
+.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+...
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~ 270 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHH
Confidence 99999999999999876543321 2233457889999999998899999999999999999999 999997544322211
Q ss_pred HHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 004155 636 LLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRAD 699 (771)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 699 (771)
.+........+......+.+++.+||+.||.+||++.|+++.|+.+..
T Consensus 271 ----------------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 271 ----------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp ----------------HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----------------HHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 111111111222334568899999999999999999999999988643
No 98
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.9e-40 Score=348.24 Aligned_cols=256 Identities=26% Similarity=0.365 Sum_probs=204.0
Q ss_pred HhcCCCCCCccccCCceeEEEEEcCC----CcEEEEEEcccC-ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHMAD----GTVVAVKQLSSK-SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLL 493 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~~~----g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 493 (771)
..++|.+.+.||+|+||.||+|...+ +..||+|++... .....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 35678899999999999999996432 346999999765 33456789999999999999999999999865 4568
Q ss_pred EEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccc
Q 004155 494 LIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 573 (771)
Q Consensus 494 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~ 573 (771)
+||||+++++|.+++.. ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 89 ~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 89 IIMELYPYGELGHYLER---NKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEecCCCCCHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 99999999999999943 234689999999999999999999998 899999999999999999999999999987
Q ss_pred cCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHH
Q 004155 574 DEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMEL 652 (771)
Q Consensus 574 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (771)
.............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+.....
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~--------------- 227 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL--------------- 227 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHH---------------
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHH---------------
Confidence 65543333344567889999999998999999999999999999998 99999754443321111
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 653 VDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 653 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
........+......+.+++.+||+.||++||++.|+++.|+.+
T Consensus 228 -~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 228 -EKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271 (281)
T ss_dssp -HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -hcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence 11001111122334588999999999999999999999999874
No 99
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=354.81 Aligned_cols=264 Identities=22% Similarity=0.307 Sum_probs=207.3
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEe----CCEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIE----GNQLLL 494 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 494 (771)
.++|++.+.||+|+||.||++.. .+|+.||||++........+.+.+|+.++++++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 46788999999999999999954 6799999999977666677889999999999999999999999873 347899
Q ss_pred EEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCcccc
Q 004155 495 IYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 574 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~ 574 (771)
||||+++|+|.+++.........+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999955333446799999999999999999999998 8999999999999999999999999998765
Q ss_pred CCCCcc--------cccccccCCCccchhhhccCC---CCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHH
Q 004155 575 EEDNTH--------ISTRVAGTFGYMAPEYAMRGY---LTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALIL 643 (771)
Q Consensus 575 ~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~ 643 (771)
...... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------------ 252 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK------------ 252 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT------------
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc------------
Confidence 321111 012245799999999987543 689999999999999999999998531100
Q ss_pred HhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 644 KAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 644 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
.......+...............+.+++.+||+.||++||++.|+++.|+.+...
T Consensus 253 --~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 253 --GDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp --TSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred --cchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 0011111111111111122345688999999999999999999999999986543
No 100
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=4.3e-40 Score=358.16 Aligned_cols=244 Identities=22% Similarity=0.322 Sum_probs=203.3
Q ss_pred cCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
++|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 5788999999999999999954 579999999986532 234567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 576 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~ 576 (771)
||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 121 e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 121 EYVAGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp ECCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 99999999999942 34689999999999999999999998 899999999999999999999999999986643
Q ss_pred CCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhh
Q 004155 577 DNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKR 656 (771)
Q Consensus 577 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 656 (771)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+... .+....
T Consensus 194 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~---------------~i~~~~ 254 (350)
T 1rdq_E 194 R----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE---------------KIVSGK 254 (350)
T ss_dssp C----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---------------HHHHCC
T ss_pred C----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHH---------------HHHcCC
Confidence 2 234579999999999999999999999999999999999999997543322111 111111
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 004155 657 LGSNFDKEQVMVMINVALLCTDVSSTSRPS-----MSSVVS 692 (771)
Q Consensus 657 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~ 692 (771)
. .++......+.+++.+||+.||++||+ +.|+++
T Consensus 255 ~--~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 255 V--RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp C--CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred C--CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 1 112223345889999999999999998 777765
No 101
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-40 Score=360.39 Aligned_cols=246 Identities=24% Similarity=0.341 Sum_probs=201.5
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 495 (771)
.++|.+.+.||+|+||.||+|. ..+|+.||||++.... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3578899999999999999995 4678999999986531 12245788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|||+ +|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 88 ~E~~-~g~l~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 88 IEYA-GGELFDYIV----EKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp ECCC-CEEHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EECC-CCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 9999 679999883 235699999999999999999999999 89999999999999999999999999998665
Q ss_pred CCCcccccccccCCCccchhhhccCCC-CchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhh
Q 004155 576 EDNTHISTRVAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVD 654 (771)
Q Consensus 576 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 654 (771)
.... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.......... .+.
T Consensus 160 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~----------------~i~ 221 (336)
T 3h4j_B 160 DGNF--LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK----------------KVN 221 (336)
T ss_dssp TSBT--TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC----------------CCC
T ss_pred CCcc--cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH----------------HHH
Confidence 4332 234569999999999987765 789999999999999999999997543222110 000
Q ss_pred hhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 655 KRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 655 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.. ....+......+.+++.+||+.||.+|||+.|+++
T Consensus 222 ~~-~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 222 SC-VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp SS-CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred cC-CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 00 01112223345789999999999999999999986
No 102
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=8.2e-41 Score=365.52 Aligned_cols=275 Identities=23% Similarity=0.307 Sum_probs=212.0
Q ss_pred ccCCCCHHHHHHHhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCChhcHHHHHHHHHHHHcCC-----CCcEE
Q 004155 407 HTGSFTLRQIKAATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSKQGNREFVNEIGMISALQ-----HPNLV 480 (771)
Q Consensus 407 ~~~~~~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----h~niv 480 (771)
....+++++.....++|.+.++||+|+||.||+|.. .+++.||||+++. .....+.+..|+.++++++ ||||+
T Consensus 21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-IKKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-CHHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc-chhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 344567777777889999999999999999999954 5789999999975 3344567788999999986 99999
Q ss_pred eEEEEEEeCCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcC-
Q 004155 481 KLHGCCIEGNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDK- 559 (771)
Q Consensus 481 ~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~- 559 (771)
++++++...+..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.
T Consensus 100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~ 173 (360)
T 3llt_A 100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNN--YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDP 173 (360)
T ss_dssp CEEEEEEETTEEEEEECCC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCT
T ss_pred cccceeeECCeeEEEEcCC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccc
Confidence 9999999999999999999 899999995432 23589999999999999999999998 8999999999999975
Q ss_pred ------------------------CCCeEEEeecCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHH
Q 004155 560 ------------------------DLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVA 615 (771)
Q Consensus 560 ------------------------~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil 615 (771)
++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 249 (360)
T 3llt_A 174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVL 249 (360)
T ss_dssp TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred cccccccchhcccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHHH
Confidence 7899999999998654322 345689999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCccchhhHHHHHHHH--------HhhCChhHHhhhh-----cCCCC-CH---------------HHH
Q 004155 616 LEIVSGRSNSSCKPKEDIFYLLDWALIL--------KAQGNLMELVDKR-----LGSNF-DK---------------EQV 666 (771)
Q Consensus 616 ~elltG~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~d~~-----l~~~~-~~---------------~~~ 666 (771)
|||++|+.||......+........... .........++.. ..... .. ...
T Consensus 250 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 329 (360)
T 3llt_A 250 AELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKH 329 (360)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCC
T ss_pred HHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchH
Confidence 9999999999765433222211110000 0000000000000 00000 00 011
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 667 MVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 667 ~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
..+.+++.+||+.||++|||+.|+++
T Consensus 330 ~~l~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 330 ELFCDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 45779999999999999999999975
No 103
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.3e-40 Score=354.12 Aligned_cols=263 Identities=24% Similarity=0.365 Sum_probs=199.9
Q ss_pred cCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccC---ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSK---SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
++|++.+.||+|+||.||+|. ..+|+.||||++... .......+.+|+.++++++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 468889999999999999995 467999999998753 2344677899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 576 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~ 576 (771)
||+++++|.+++.........+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999999954333345789999999999999999999998 899999999999999999999999999986544
Q ss_pred CCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhh
Q 004155 577 DNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKR 656 (771)
Q Consensus 577 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 656 (771)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||....... .... .... .. .
T Consensus 189 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~---~~~~-~~--------~ 254 (310)
T 2wqm_A 189 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-YSLC---KKIE-QC--------D 254 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCH-HHHH---HHHH-TT--------C
T ss_pred CCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhH-HHHH---HHhh-cc--------c
Confidence 322 2233568999999999999999999999999999999999999997533221 1111 1111 11 0
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 657 LGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 657 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
............+.+++.+||+.||++||++.+|++.|+.+.+.
T Consensus 255 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~ 298 (310)
T 2wqm_A 255 YPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHAC 298 (310)
T ss_dssp SCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 10001112234688999999999999999999999999886544
No 104
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=4e-40 Score=361.71 Aligned_cols=246 Identities=24% Similarity=0.314 Sum_probs=196.8
Q ss_pred CCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEeccCCCH
Q 004155 426 DNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEYMENNSL 504 (771)
Q Consensus 426 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL 504 (771)
.+.||+|+||.||+|. ..+|+.||+|+++.......+.+.+|+.++++++||||+++++++.+.+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 5689999999999995 467999999999877666678899999999999999999999999999999999999999999
Q ss_pred HHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEE--cCCCCeEEEeecCccccCCCCcccc
Q 004155 505 ARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLL--DKDLNPKISDFGLAKLDEEDNTHIS 582 (771)
Q Consensus 505 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll--~~~~~~kl~DFGla~~~~~~~~~~~ 582 (771)
.+++... ...+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++....... .
T Consensus 174 ~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~ 245 (373)
T 2x4f_A 174 FDRIIDE---SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--L 245 (373)
T ss_dssp HHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--C
T ss_pred HHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--c
Confidence 9988432 34689999999999999999999998 89999999999999 6778999999999987654332 2
Q ss_pred cccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhcCCCCC
Q 004155 583 TRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRLGSNFD 662 (771)
Q Consensus 583 ~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 662 (771)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......+... ...... . ...... ..
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~------~i~~~~-~-~~~~~~-~~--- 313 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLN------NILACR-W-DLEDEE-FQ--- 313 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------HHHHTC-C-CSCSGG-GT---
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHH------HHHhcc-C-CCChhh-hc---
Confidence 33469999999999999999999999999999999999999997654322111 000000 0 000000 01
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 663 KEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 663 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.....+.+++.+||+.||++||++.|+++
T Consensus 314 -~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 314 -DISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp -TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -cCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 12346889999999999999999999987
No 105
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.7e-40 Score=364.29 Aligned_cols=249 Identities=22% Similarity=0.318 Sum_probs=198.2
Q ss_pred cCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCC--CCcEEeEEEEEEeCCEEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQ--HPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lV~ 496 (771)
++|.+.+.||+|+||.||+|...+++.||||++... .....+.+.+|+.++++++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 458889999999999999998878999999998654 3344678999999999996 599999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 576 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~ 576 (771)
| +.+++|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++....
T Consensus 136 E-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 136 E-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp E-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred e-cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 9 568899999943 34689999999999999999999998 899999999999995 58999999999987654
Q ss_pred CCcc-cccccccCCCccchhhhcc-----------CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHH
Q 004155 577 DNTH-ISTRVAGTFGYMAPEYAMR-----------GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILK 644 (771)
Q Consensus 577 ~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~ 644 (771)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~--~--------- 275 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--S--------- 275 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--H---------
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH--H---------
Confidence 3322 2334579999999999865 468999999999999999999999996532211 0
Q ss_pred hhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 645 AQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 645 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.+..++++.....++......+.+++.+||+.||++||++.|+++
T Consensus 276 ---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 276 ---KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp ---HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---HHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 112223332222222222346889999999999999999999986
No 106
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.1e-40 Score=351.51 Aligned_cols=264 Identities=23% Similarity=0.321 Sum_probs=199.5
Q ss_pred cCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCCh--hcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSK--QGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 497 (771)
++|++.++||+|+||.||+|.. .+|+.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 6788999999999999999955 4689999999865432 335678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCC
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 577 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~ 577 (771)
|+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~~~~~l~~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 83 YCDHTVLHELDRY----QRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp CCSEEHHHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred eCCCchHHHHHhh----hcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 9999999998833 34689999999999999999999998 8999999999999999999999999999876543
Q ss_pred CcccccccccCCCccchhhhcc-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHH--------HHHhhCC
Q 004155 578 NTHISTRVAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWAL--------ILKAQGN 648 (771)
Q Consensus 578 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~--------~~~~~~~ 648 (771)
... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||......+......... .......
T Consensus 156 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (311)
T 4agu_A 156 SDY-YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQ 234 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCG
T ss_pred ccc-cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccc
Confidence 322 234568999999999976 678999999999999999999999997654433322211100 0000000
Q ss_pred hhHHhh-hhcCCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 649 LMELVD-KRLGSNFD-----KEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 649 ~~~~~d-~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
...... +....... ......+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000000 00000000 112345889999999999999999999986
No 107
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.2e-40 Score=383.01 Aligned_cols=259 Identities=28% Similarity=0.439 Sum_probs=211.8
Q ss_pred HhcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEe
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEY 498 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 498 (771)
..++|++.++||+|+||.||+|...++..||||+++... ...+.|.+|++++++++||||+++++++.+ +..++||||
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 456788899999999999999988778889999997643 345789999999999999999999999876 678999999
Q ss_pred ccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCC
Q 004155 499 MENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 578 (771)
Q Consensus 499 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~ 578 (771)
+++|+|.+++... ....+++.+++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++......
T Consensus 343 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 417 (535)
T 2h8h_A 343 MSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417 (535)
T ss_dssp CTTEEHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH
T ss_pred hcCCcHHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc
Confidence 9999999999432 224689999999999999999999998 89999999999999999999999999998665432
Q ss_pred cccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhc
Q 004155 579 THISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRL 657 (771)
Q Consensus 579 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 657 (771)
........++..|+|||++.+..++.++|||||||++|||++ |+.||......+... .+....
T Consensus 418 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~----------------~i~~~~ 481 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD----------------QVERGY 481 (535)
T ss_dssp HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHH----------------HHHTTC
T ss_pred eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH----------------HHHcCC
Confidence 222233456789999999999999999999999999999999 999997543322111 111111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 658 GSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 658 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
....+......+.+++.+||+.||++||++.+|+++|+.....
T Consensus 482 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 482 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 1122223445688999999999999999999999999987543
No 108
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=353.50 Aligned_cols=265 Identities=18% Similarity=0.229 Sum_probs=200.2
Q ss_pred hcCCCCCCccccCCceeEEEEEcC----CCcEEEEEEcccCChh-----------cHHHHHHHHHHHHcCCCCcEEeEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMA----DGTVVAVKQLSSKSKQ-----------GNREFVNEIGMISALQHPNLVKLHG 484 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~ 484 (771)
.++|.+.+.||+|+||.||+|... ++..||||++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357888999999999999999654 5788999998764321 1234677889999999999999999
Q ss_pred EEEe----CCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCC
Q 004155 485 CCIE----GNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKD 560 (771)
Q Consensus 485 ~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~ 560 (771)
++.. ....++||||+ +++|.+++.. ...+++..++.|+.||+.||+|||+. +|+||||||+|||++.+
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQ----NGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBG----GGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccC
Confidence 9988 77899999999 9999999943 23799999999999999999999998 89999999999999888
Q ss_pred C--CeEEEeecCccccCCCCcc------cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccc
Q 004155 561 L--NPKISDFGLAKLDEEDNTH------ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKED 632 (771)
Q Consensus 561 ~--~~kl~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~ 632 (771)
+ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~ 267 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP 267 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc
Confidence 7 9999999999876433211 1234579999999999999999999999999999999999999996432221
Q ss_pred hhhHHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 004155 633 IFYLLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRA 698 (771)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 698 (771)
.. ... ....... .+...+...... ......+.+++.+||+.||++||++.+|++.|+...
T Consensus 268 ~~-~~~-~~~~~~~-~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 268 VA-VQT-AKTNLLD-ELPQSVLKWAPS---GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HH-HHH-HHHHHHH-TTTHHHHHHSCT---TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HH-HHH-HHHhhcc-cccHHHHhhccc---cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 11 111 1111111 111112111110 012345889999999999999999999999999864
No 109
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.2e-40 Score=346.38 Aligned_cols=255 Identities=25% Similarity=0.393 Sum_probs=207.2
Q ss_pred cCCCCCC-ccccCCceeEEEEEc---CCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEE
Q 004155 421 NNFAPDN-KIGEGGFGPVYKGHM---ADGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 421 ~~f~~~~-~lG~G~~g~Vy~~~~---~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 495 (771)
++|.+.+ .||+|+||.||+|.. .++..||||+++... ....+.+.+|++++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4555555 899999999999964 357889999997643 34567899999999999999999999999 55679999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 88 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EECCTTEEHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEeCCCCCHHHHHHhC---CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 9999999999999532 34699999999999999999999998 89999999999999999999999999998765
Q ss_pred CCCccc--ccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHH
Q 004155 576 EDNTHI--STRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMEL 652 (771)
Q Consensus 576 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (771)
...... .....||+.|+|||++.+..++.++||||||+++|||++ |+.||......+... .
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~----------------~ 225 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA----------------F 225 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHH----------------H
T ss_pred cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHH----------------H
Confidence 433221 223456889999999998889999999999999999998 999997654332211 1
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 004155 653 VDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRA 698 (771)
Q Consensus 653 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 698 (771)
+........+......+.+++.+||+.||++||++.++++.|+.+.
T Consensus 226 i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 271 (287)
T 1u59_A 226 IEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 271 (287)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1111111222334456889999999999999999999999998754
No 110
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=4.4e-40 Score=348.50 Aligned_cols=260 Identities=30% Similarity=0.485 Sum_probs=196.4
Q ss_pred HhcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
..++|++.++||+|+||.||+|... ..||||+++.. .....+.+.+|+.++++++||||+++++++ ..+..++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 3467889999999999999999764 35999998754 334457899999999999999999999965 456689999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 576 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~ 576 (771)
||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 99 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 99 QWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp ECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EecCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccc
Confidence 999999999999543 34699999999999999999999998 899999999999999999999999999986543
Q ss_pred CC-cccccccccCCCccchhhhc---cCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHH
Q 004155 577 DN-THISTRVAGTFGYMAPEYAM---RGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMEL 652 (771)
Q Consensus 577 ~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (771)
.. ........||+.|+|||.+. +..++.++||||||+++|||++|+.||......+. .... ...+...
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~----~~~~~~~-- 244 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--IIEM----VGRGSLS-- 244 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH--HHHH----HHHTSCC--
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH--HHHH----hcccccC--
Confidence 22 22223456999999999986 56789999999999999999999999976443221 1111 1111110
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 004155 653 VDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRA 698 (771)
Q Consensus 653 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 698 (771)
+.+ ..........+.+++.+||+.||++||++.|++++|+.+.
T Consensus 245 --~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 245 --PDL-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp --CCT-TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred --cch-hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 000 1111233456889999999999999999999999998864
No 111
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=8.8e-41 Score=360.17 Aligned_cols=256 Identities=27% Similarity=0.394 Sum_probs=203.0
Q ss_pred cCCCCCCccccCCceeEEEEEc-CCCcE----EEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHM-ADGTV----VAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLL 494 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~----vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 494 (771)
++|++.++||+|+||.||+|.. .+++. ||+|.+.... ......+.+|+.++++++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 5688899999999999999954 44543 8888875432 233456788999999999999999999986 456899
Q ss_pred EEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCcccc
Q 004155 495 IYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 574 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~ 574 (771)
||||+++|+|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 92 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred EEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccccc
Confidence 99999999999999543 24689999999999999999999998 8999999999999999999999999999876
Q ss_pred CCCCcc-cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHH
Q 004155 575 EEDNTH-ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMEL 652 (771)
Q Consensus 575 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (771)
...... ......||..|+|||++.+..++.++|||||||++|||+| |+.||............
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~--------------- 230 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL--------------- 230 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHH---------------
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHH---------------
Confidence 544322 2344568889999999999999999999999999999999 99999765433322111
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 004155 653 VDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRAD 699 (771)
Q Consensus 653 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 699 (771)
........+......+.+++.+||+.||++||++.|+++.|+....
T Consensus 231 -~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 231 -EKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp -HTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred -HcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1111111111223347789999999999999999999999987654
No 112
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=9.4e-40 Score=354.88 Aligned_cols=249 Identities=23% Similarity=0.330 Sum_probs=199.1
Q ss_pred cCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccC---ChhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeCCEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSK---SKQGNREFVNEIGMISAL-QHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 495 (771)
++|++.+.||+|+||.||+|.. .+|+.||+|++... .....+.+.+|..++.++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 5688899999999999999954 56899999999754 233456788999999988 899999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|||+++|+|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++++||+|||+++...
T Consensus 89 ~e~~~gg~L~~~l~----~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp ECCCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EeCCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 99999999999993 234699999999999999999999998 89999999999999999999999999998543
Q ss_pred CCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchh--hHHHHHHHHHhhCChhHHh
Q 004155 576 EDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIF--YLLDWALILKAQGNLMELV 653 (771)
Q Consensus 576 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 653 (771)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ........ .+.
T Consensus 162 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~--------~i~ 232 (345)
T 3a8x_A 162 RPGD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ--------VIL 232 (345)
T ss_dssp CTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHH--------HHH
T ss_pred CCCC-cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHH--------HHH
Confidence 3222 234467999999999999999999999999999999999999999753221110 00000000 111
Q ss_pred hhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 004155 654 DKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSM 687 (771)
Q Consensus 654 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 687 (771)
... ..++......+.+++.+||+.||++||++
T Consensus 233 ~~~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 233 EKQ--IRIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp HCC--CCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred cCC--CCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 111 11222234468899999999999999996
No 113
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.7e-40 Score=343.84 Aligned_cols=245 Identities=26% Similarity=0.368 Sum_probs=180.6
Q ss_pred cCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
++|++.++||+|+||.||+|. ..+|+.||+|++.... ......+.+|+.++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 579999999999999999995 4578999999987542 233567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 576 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~ 576 (771)
||+ +++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 93 e~~-~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 93 EYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHT----SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred hhc-CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 999 6688888743 34699999999999999999999998 899999999999999999999999999986544
Q ss_pred CCcccccccccCCCccchhhhccCCC-CchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 577 DNTHISTRVAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 577 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
... .....||+.|+|||.+.+..+ +.++|||||||++|||++|+.||.......... . +...
T Consensus 165 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~------~---------~~~~ 227 (275)
T 2eue_A 165 GNF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK------N---------ISNG 227 (275)
T ss_dssp ------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------H---------HHHT
T ss_pred ccc--ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHH------H---------HHhC
Confidence 322 233468999999999987765 789999999999999999999997543221111 0 0000
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
. ...+......+.+++.+||+.||++|||+.|+++
T Consensus 228 ~--~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 228 V--YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp C--CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred C--CCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 0 1112223345789999999999999999999975
No 114
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.8e-40 Score=358.73 Aligned_cols=249 Identities=22% Similarity=0.346 Sum_probs=202.9
Q ss_pred HhcCCCCCCccccCCceeEEEEEcC-CCcEEEEEEcccCC---hhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeCCEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHMA-DGTVVAVKQLSSKS---KQGNREFVNEIGMISAL-QHPNLVKLHGCCIEGNQLL 493 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 493 (771)
..++|++.+.||+|+||.||+|... +|+.||||+++... ....+.+..|..++..+ +||||+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3568999999999999999999654 58899999987542 23456788999999988 7999999999999999999
Q ss_pred EEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccc
Q 004155 494 LIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 573 (771)
Q Consensus 494 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~ 573 (771)
+||||+++|+|.+++. ....+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 98 lv~E~~~gg~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQ----QVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 9999999999999993 234699999999999999999999998 899999999999999999999999999985
Q ss_pred cCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHh
Q 004155 574 DEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELV 653 (771)
Q Consensus 574 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (771)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+... .+.
T Consensus 171 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~---------------~i~ 234 (353)
T 2i0e_A 171 NIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ---------------SIM 234 (353)
T ss_dssp CCCTTC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---------------HHH
T ss_pred cccCCc-ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHH---------------HHH
Confidence 432222 2344679999999999999999999999999999999999999997543322111 111
Q ss_pred hhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 004155 654 DKRLGSNFDKEQVMVMINVALLCTDVSSTSRPS-----MSSVVS 692 (771)
Q Consensus 654 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~ 692 (771)
.... .++......+.+++.+||+.||++||+ +.|+++
T Consensus 235 ~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 235 EHNV--AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp HCCC--CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred hCCC--CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 1111 122223346889999999999999996 466654
No 115
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.6e-40 Score=347.94 Aligned_cols=260 Identities=24% Similarity=0.373 Sum_probs=205.4
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEe--CCEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIE--GNQLLL 494 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 494 (771)
.++|++.+.||+|+||.||+|.. .+|+.||+|++... .....+.+.+|+.++++++||||+++++++.+ ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 46788999999999999999954 57899999999754 33446779999999999999999999998864 578999
Q ss_pred EEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcC--CCceeccCCCCCcEEEcCCCCeEEEeecCcc
Q 004155 495 IYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEES--RLKIVHRDIKATNVLLDKDLNPKISDFGLAK 572 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~--~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~ 572 (771)
||||+++++|.+++.........+++..++.++.|++.||+|||+.+ ..+|+||||||+||+++.++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999999654333456999999999999999999999982 0129999999999999999999999999998
Q ss_pred ccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHH
Q 004155 573 LDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMEL 652 (771)
Q Consensus 573 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (771)
....... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+. .. .. ..+.
T Consensus 165 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~---~i-~~~~---- 232 (279)
T 2w5a_A 165 ILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL---AG---KI-REGK---- 232 (279)
T ss_dssp HC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HH---HH-HHTC----
T ss_pred eeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHH---HH---HH-hhcc----
Confidence 7654322 12335689999999999999999999999999999999999999975432211 11 00 1111
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 004155 653 VDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEG 696 (771)
Q Consensus 653 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~ 696 (771)
....+......+.+++.+||+.||++||++.|+++.+..
T Consensus 233 -----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 233 -----FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp -----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred -----cccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 111222234568899999999999999999999986654
No 116
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=4.8e-40 Score=354.77 Aligned_cols=248 Identities=24% Similarity=0.357 Sum_probs=194.1
Q ss_pred hcCCCCCCccccCCceeEEEEEc----CCCcEEEEEEcccCC----hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM----ADGTVVAVKQLSSKS----KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQ 491 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~----~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 491 (771)
.++|++.+.||+|+||.||++.. .+|+.||+|+++... ......+.+|+.++++++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46788999999999999999965 478999999997642 2234567889999999999999999999999999
Q ss_pred EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCc
Q 004155 492 LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 571 (771)
Q Consensus 492 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla 571 (771)
.++||||+++|+|.+++. ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 96 ~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLE----REGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp EEEEEECCTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred EEEEEeCCCCCcHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 999999999999999993 234689999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhH
Q 004155 572 KLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLME 651 (771)
Q Consensus 572 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (771)
+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .
T Consensus 169 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~---------------~ 232 (327)
T 3a62_A 169 KESIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID---------------K 232 (327)
T ss_dssp -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH---------------H
T ss_pred cccccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHH---------------H
Confidence 85433222 2234579999999999999999999999999999999999999997543322111 1
Q ss_pred HhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 004155 652 LVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRP-----SMSSVVS 692 (771)
Q Consensus 652 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 692 (771)
+..... ..+......+.+++.+||+.||++|| ++.|+++
T Consensus 233 i~~~~~--~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 233 ILKCKL--NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp HHHTCC--CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred HHhCCC--CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 111111 11222334688999999999999999 6777765
No 117
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.4e-40 Score=348.71 Aligned_cols=253 Identities=25% Similarity=0.351 Sum_probs=199.3
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 497 (771)
.++|.+.++||+|+||.||+|. ..+|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 4578899999999999999995 4568999999987643 3346789999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEE---cCCCCeEEEeecCcccc
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLAKLD 574 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DFGla~~~ 574 (771)
|+++|+|.+++.........+++..++.|+.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++..
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 9999999999854433346799999999999999999999998 89999999999999 55688999999999865
Q ss_pred CCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhh
Q 004155 575 EEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVD 654 (771)
Q Consensus 575 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 654 (771)
..... .....||+.|+|||.+. ..++.++|||||||++|||++|+.||......+..... ... .
T Consensus 178 ~~~~~--~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~------~~~-------~ 241 (285)
T 3is5_A 178 KSDEH--STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKA------TYK-------E 241 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------HHC-------C
T ss_pred CCccc--CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhh------ccC-------C
Confidence 44322 23456899999999886 56899999999999999999999999754432211100 000 0
Q ss_pred hhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 655 KRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 655 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
...... .......+.+++.+||+.||++||++.|+++
T Consensus 242 ~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 242 PNYAVE-CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CCCCC---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cccccc-cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000 0012345788999999999999999999985
No 118
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.1e-39 Score=343.06 Aligned_cols=247 Identities=21% Similarity=0.309 Sum_probs=204.2
Q ss_pred HhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 497 (771)
..++|++.+.||+|+||.||+|.. .++..||+|++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 356789999999999999999954 4578999999987655667889999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEE---cCCCCeEEEeecCcccc
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLAKLD 574 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DFGla~~~ 574 (771)
|+++++|.+++. ....+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++...
T Consensus 87 ~~~~~~L~~~~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 87 LCTGGELFERVV----HKRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp CCCSCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred ccCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 999999999983 234689999999999999999999998 89999999999999 88899999999999876
Q ss_pred CCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhh
Q 004155 575 EEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVD 654 (771)
Q Consensus 575 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 654 (771)
..... .....||+.|+|||.+.+. ++.++||||||+++|||++|+.||......+.... .. .+
T Consensus 160 ~~~~~--~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~------~~-~~------- 222 (277)
T 3f3z_A 160 KPGKM--MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLK------IR-EG------- 222 (277)
T ss_dssp CTTSC--BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH------HH-HC-------
T ss_pred cCccc--hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHH------HH-hC-------
Confidence 54332 2345699999999988654 89999999999999999999999976433221110 00 00
Q ss_pred hhcCCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 655 KRLGSNFDK----EQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 655 ~~l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
. ...+. .....+.+++.+|++.||++||++.|+++
T Consensus 223 -~--~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 223 -T--FTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -C--CCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -C--CCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 01111 12346889999999999999999999975
No 119
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.5e-40 Score=351.70 Aligned_cols=253 Identities=23% Similarity=0.355 Sum_probs=203.3
Q ss_pred hcCCCCCCccccCCceeEEEEEcC-CC-------cEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMA-DG-------TVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQ 491 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~-~g-------~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 491 (771)
.++|.+.+.||+|+||.||+|... ++ +.||+|++........+.+.+|+.++++++||||+++++++.+++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 357888999999999999999543 23 5799999987666677889999999999999999999999999999
Q ss_pred EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCC--------e
Q 004155 492 LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN--------P 563 (771)
Q Consensus 492 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~--------~ 563 (771)
.++||||+++|+|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++. +
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred CEEEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccccccee
Confidence 99999999999999999532 23489999999999999999999998 8999999999999998887 9
Q ss_pred EEEeecCccccCCCCcccccccccCCCccchhhhcc-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHH
Q 004155 564 KISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALI 642 (771)
Q Consensus 564 kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~ 642 (771)
||+|||+++..... ....||+.|+|||++.+ ..++.++|||||||++|||++|..|+........ .. ..
T Consensus 161 kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~--~~---~~ 230 (289)
T 4fvq_A 161 KLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR--KL---QF 230 (289)
T ss_dssp EECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HH---HH
T ss_pred eeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH--HH---HH
Confidence 99999999754332 22458899999999987 7799999999999999999996555433222111 00 00
Q ss_pred HHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 643 LKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 643 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
.... ..+.. .....+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 231 ~~~~--------~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 231 YEDR--------HQLPA----PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp HHTT--------CCCCC----CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred hhcc--------CCCCC----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 0000 01111 1123478899999999999999999999999997653
No 120
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.6e-40 Score=358.09 Aligned_cols=260 Identities=21% Similarity=0.233 Sum_probs=202.4
Q ss_pred HHHHHhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccC-----ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEe
Q 004155 415 QIKAATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSK-----SKQGNREFVNEIGMISALQHPNLVKLHGCCIE 488 (771)
Q Consensus 415 ~l~~~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 488 (771)
++....++|.+.+.||+|+||.||+|. ..+++.||+|++... .....+.+.+|+.++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 345677889999999999999999995 467889999998643 23445789999999999999999999999999
Q ss_pred CCEEEEEEEeccCCCHHHHhcCCCc------------------------------------cCCCCChHHHHHHHHHHHH
Q 004155 489 GNQLLLIYEYMENNSLARALFGPEA------------------------------------HRLKLDWPTRHRICVGIAR 532 (771)
Q Consensus 489 ~~~~~lV~E~~~~gsL~~~l~~~~~------------------------------------~~~~l~~~~~~~i~~~ia~ 532 (771)
.+..++||||+++|+|.+++..... ....+++..++.|+.||+.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 9999999999999999999842100 0122467788899999999
Q ss_pred HHHHhhhcCCCceeccCCCCCcEEEcCCC--CeEEEeecCccccCCCCc---ccccccccCCCccchhhhcc--CCCCch
Q 004155 533 GLAYLHEESRLKIVHRDIKATNVLLDKDL--NPKISDFGLAKLDEEDNT---HISTRVAGTFGYMAPEYAMR--GYLTDK 605 (771)
Q Consensus 533 aL~~LH~~~~~~ivH~Dlkp~NIll~~~~--~~kl~DFGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~k 605 (771)
||+|||+. +|+||||||+||+++.++ .+||+|||+++....... .......||+.|+|||++.+ ..++.+
T Consensus 180 ~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 99999998 899999999999998776 899999999986543221 12234569999999999975 678999
Q ss_pred HhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhcCCCC--CHHHHHHHHHHHHHccCCCCCC
Q 004155 606 ADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRLGSNF--DKEQVMVMINVALLCTDVSSTS 683 (771)
Q Consensus 606 sDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~--~~~~~~~l~~l~~~Cl~~dP~~ 683 (771)
+|||||||++|||++|+.||......+... .+......... .......+.+++.+||+.||++
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 321 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDADTIS---------------QVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDE 321 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---------------HHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChHHHHH---------------HHHhcccccCCcccccCCHHHHHHHHHHcCCChhH
Confidence 999999999999999999997544322111 11111110000 0112346889999999999999
Q ss_pred CCCHHHHHH
Q 004155 684 RPSMSSVVS 692 (771)
Q Consensus 684 RPs~~evl~ 692 (771)
||++.|+++
T Consensus 322 Rps~~~~l~ 330 (345)
T 3hko_A 322 RFDAMRALQ 330 (345)
T ss_dssp SCCHHHHHH
T ss_pred CCCHHHHhc
Confidence 999999987
No 121
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.5e-39 Score=349.91 Aligned_cols=252 Identities=22% Similarity=0.304 Sum_probs=204.9
Q ss_pred HhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCCh------hcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSK------QGNREFVNEIGMISALQHPNLVKLHGCCIEGNQ 491 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 491 (771)
..++|.+.+.||+|+||.||+|.. .+|+.||+|++..... ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 346788999999999999999954 5689999999875432 136789999999999999999999999999999
Q ss_pred EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCC----CeEEEe
Q 004155 492 LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL----NPKISD 567 (771)
Q Consensus 492 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~D 567 (771)
.++||||+++++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 90 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~D 162 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (321)
T ss_dssp EEEEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEcc
Confidence 9999999999999999943 34689999999999999999999998 899999999999999888 799999
Q ss_pred ecCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhC
Q 004155 568 FGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQG 647 (771)
Q Consensus 568 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 647 (771)
||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+..... .....
T Consensus 163 fg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i-----~~~~~ 235 (321)
T 2a2a_A 163 FGLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI-----TSVSY 235 (321)
T ss_dssp CTTCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH-----HTTCC
T ss_pred CccceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-----Hhccc
Confidence 999987654322 23456899999999999999999999999999999999999999754332211100 00000
Q ss_pred ChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 648 NLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 648 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.. ++..... ....+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~----~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 DF----DEEFFSH----TSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CC----CHHHHTT----CCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred cc----Chhhhcc----cCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00 0000011 1245789999999999999999999987
No 122
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-39 Score=352.02 Aligned_cols=272 Identities=28% Similarity=0.369 Sum_probs=206.9
Q ss_pred CCHHHHHHHhcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcC--CCCcEEeEEEEEEe
Q 004155 411 FTLRQIKAATNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISAL--QHPNLVKLHGCCIE 488 (771)
Q Consensus 411 ~~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~ 488 (771)
.....-....++|++.++||+|+||.||+|... |+.||||++... ....+..|.+++... +||||+++++++..
T Consensus 27 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~ 102 (337)
T 3mdy_A 27 LPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIK 102 (337)
T ss_dssp SCHHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred CCcccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEcc
Confidence 344444556678999999999999999999874 899999998643 234555666666655 89999999999998
Q ss_pred C----CEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcC-----CCceeccCCCCCcEEEcC
Q 004155 489 G----NQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEES-----RLKIVHRDIKATNVLLDK 559 (771)
Q Consensus 489 ~----~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~-----~~~ivH~Dlkp~NIll~~ 559 (771)
. ...++||||+++|+|.+++. ...+++..++.++.|++.||+|||+.+ .++|+||||||+|||++.
T Consensus 103 ~~~~~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~ 177 (337)
T 3mdy_A 103 GTGSWTQLYLITDYHENGSLYDYLK-----STTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKK 177 (337)
T ss_dssp SCGGGCEEEEEECCCTTCBHHHHHH-----HCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECT
T ss_pred CCCCCCceEEEEeccCCCcHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECC
Confidence 7 78999999999999999993 246899999999999999999999862 347999999999999999
Q ss_pred CCCeEEEeecCccccCCCCccc---ccccccCCCccchhhhccCCCCch------HhHHHHHHHHHHHHhC---------
Q 004155 560 DLNPKISDFGLAKLDEEDNTHI---STRVAGTFGYMAPEYAMRGYLTDK------ADVYSFGIVALEIVSG--------- 621 (771)
Q Consensus 560 ~~~~kl~DFGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~k------sDV~S~Gvil~elltG--------- 621 (771)
++.+||+|||+++......... .....||+.|+|||++.+...+.+ +|||||||++|||+||
T Consensus 178 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~ 257 (337)
T 3mdy_A 178 NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEE 257 (337)
T ss_dssp TSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred CCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccc
Confidence 9999999999997665433221 123579999999999987766554 9999999999999999
Q ss_pred -CCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhcCCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 004155 622 -RSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRLGSNFD-----KEQVMVMINVALLCTDVSSTSRPSMSSVVSMLE 695 (771)
Q Consensus 622 -~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 695 (771)
+.||.......... .. .... ..........+ ......+.+++.+||+.||++||++.||++.|+
T Consensus 258 ~~~p~~~~~~~~~~~-~~-~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 327 (337)
T 3mdy_A 258 YQLPYHDLVPSDPSY-ED-MREI--------VCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327 (337)
T ss_dssp CCCTTTTTSCSSCCH-HH-HHHH--------HTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred ccccHhhhcCCCCch-hh-hHHH--------HhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHH
Confidence 56665432221110 00 0000 01111112222 256778999999999999999999999999998
Q ss_pred CCCCCC
Q 004155 696 GRADVQ 701 (771)
Q Consensus 696 ~~~~~~ 701 (771)
.+.+..
T Consensus 328 ~l~~~~ 333 (337)
T 3mdy_A 328 KMSESQ 333 (337)
T ss_dssp HHHHTT
T ss_pred HHHhhc
Confidence 865443
No 123
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.4e-39 Score=343.30 Aligned_cols=264 Identities=22% Similarity=0.269 Sum_probs=203.7
Q ss_pred HhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEE-EeCCEEEEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCC-IEGNQLLLIY 496 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lV~ 496 (771)
..++|++.+.||+|+||.||+|. ..+++.||||++..... ...+.+|+.+++.++|++++..+..+ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 45789999999999999999995 46789999998755332 23578899999999887766665554 6778899999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEE---cCCCCeEEEeecCccc
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLAKL 573 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DFGla~~ 573 (771)
||+ +++|.+++... ...+++..++.++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++.
T Consensus 85 e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp ECC-CCBHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred Ecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence 999 99999999422 34699999999999999999999998 89999999999999 7899999999999987
Q ss_pred cCCCCcc------cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhC
Q 004155 574 DEEDNTH------ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQG 647 (771)
Q Consensus 574 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 647 (771)
....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||......................
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (296)
T 4hgt_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST 237 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS
T ss_pred ccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc
Confidence 6543321 1234579999999999999999999999999999999999999998644333222222111111111
Q ss_pred ChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 648 NLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 648 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
.. +.....+ ...+.+++.+||+.||++||++.++++.|+.+...
T Consensus 238 ~~-----~~~~~~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 238 PI-----EVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp CH-----HHHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred hh-----hhhhccC----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 10 1111122 24588999999999999999999999999886543
No 124
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=4.7e-40 Score=352.65 Aligned_cols=264 Identities=20% Similarity=0.263 Sum_probs=198.2
Q ss_pred hcCCCCC-CccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeCCEEEEEE
Q 004155 420 TNNFAPD-NKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISAL-QHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 420 ~~~f~~~-~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 496 (771)
.+.|.+. +.||+|+||.||+|. ..+++.||||++..........+.+|++++.++ +||||+++++++.+.+..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 3567764 789999999999995 457899999999876656678899999999985 7999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCC---eEEEeecCccc
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN---PKISDFGLAKL 573 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DFGla~~ 573 (771)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++. +||+|||+++.
T Consensus 91 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 91 EKMRGGSILSHIHK----RRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp ECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred EcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 99999999999943 34689999999999999999999998 8999999999999988776 99999999976
Q ss_pred cCCCCc------ccccccccCCCccchhhhcc-----CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHH
Q 004155 574 DEEDNT------HISTRVAGTFGYMAPEYAMR-----GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALI 642 (771)
Q Consensus 574 ~~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~ 642 (771)
...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+..........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 243 (316)
T 2ac3_A 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP 243 (316)
T ss_dssp ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCH
T ss_pred cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccch
Confidence 542211 11123459999999999875 5688999999999999999999999976543221100000000
Q ss_pred HHhhCChhHHhhhhcCCCCCHH----HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 643 LKAQGNLMELVDKRLGSNFDKE----QVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 643 ~~~~~~~~~~~d~~l~~~~~~~----~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.. ...+.+.+... ...++.. ....+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~-~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 244 AC-QNMLFESIQEG-KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HH-HHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hH-HHHHHHHHhcc-CcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 00 00000001100 0111111 2346889999999999999999999987
No 125
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.3e-39 Score=365.57 Aligned_cols=251 Identities=24% Similarity=0.378 Sum_probs=206.1
Q ss_pred cCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
++|.+.+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 5788899999999999999954 579999999986532 123567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 576 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~ 576 (771)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 96 E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 96 EYVSGGELFDYICK----NGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp ECCSSEEHHHHTTS----SSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 99999999999943 34699999999999999999999998 899999999999999999999999999987654
Q ss_pred CCcccccccccCCCccchhhhccCCC-CchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 577 DNTHISTRVAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 577 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.......... .+.+.
T Consensus 169 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~---------------~i~~~ 231 (476)
T 2y94_A 169 GEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFK---------------KICDG 231 (476)
T ss_dssp TCC--BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHH---------------HHHTT
T ss_pred ccc--ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHH---------------HHhcC
Confidence 322 234579999999999988764 789999999999999999999997543322111 11111
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HhcCC
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS--MLEGR 697 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~~ 697 (771)
.. ..+......+.+++.+||+.||++|||+.|+++ .++..
T Consensus 232 ~~--~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~ 273 (476)
T 2y94_A 232 IF--YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD 273 (476)
T ss_dssp CC--CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred Cc--CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence 11 111112345788999999999999999999997 55554
No 126
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.2e-39 Score=360.40 Aligned_cols=269 Identities=19% Similarity=0.266 Sum_probs=203.8
Q ss_pred HhcCCCCCCccccC--CceeEEEEEc-CCCcEEEEEEcccCC--hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEE
Q 004155 419 ATNNFAPDNKIGEG--GFGPVYKGHM-ADGTVVAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLL 493 (771)
Q Consensus 419 ~~~~f~~~~~lG~G--~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 493 (771)
..++|++.++||+| +||.||+|.. .+|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 34678999999999 9999999954 479999999997542 344567889999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccc
Q 004155 494 LIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 573 (771)
Q Consensus 494 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~ 573 (771)
+||||+++|+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||.+..
T Consensus 103 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEEECCTTCBHHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEccCCCCHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 9999999999999995432 24689999999999999999999998 899999999999999999999999999865
Q ss_pred cCCCCc------ccccccccCCCccchhhhcc--CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHH-HHHHH-H
Q 004155 574 DEEDNT------HISTRVAGTFGYMAPEYAMR--GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLL-DWALI-L 643 (771)
Q Consensus 574 ~~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~-~~~~~-~ 643 (771)
...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............ ..... .
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 257 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 257 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcc
Confidence 432211 11123468999999999987 57899999999999999999999999765433321100 00000 0
Q ss_pred Hh-----hC-------------ChhHHhhh---h------cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 644 KA-----QG-------------NLMELVDK---R------LGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 644 ~~-----~~-------------~~~~~~d~---~------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.. .. ...+.+.. . ............+.+++.+||+.||++|||+.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 00 00 00000000 0 000011222346889999999999999999999985
No 127
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.5e-40 Score=355.80 Aligned_cols=270 Identities=24% Similarity=0.397 Sum_probs=215.8
Q ss_pred CCHHHHHHHhcCCCCCCccccCCceeEEEEEcC------CCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEE
Q 004155 411 FTLRQIKAATNNFAPDNKIGEGGFGPVYKGHMA------DGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLH 483 (771)
Q Consensus 411 ~~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~ 483 (771)
+..++.+...++|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.++++++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 344455566788999999999999999999543 36889999997543 33456789999999999999999999
Q ss_pred EEEEeCCEEEEEEEeccCCCHHHHhcCCCc------cCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEE
Q 004155 484 GCCIEGNQLLLIYEYMENNSLARALFGPEA------HRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLL 557 (771)
Q Consensus 484 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll 557 (771)
+++.+.+..++||||+++|+|.+++..... ....+++..++.++.||+.||+|||++ +|+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEE
Confidence 999999999999999999999999953211 124679999999999999999999998 89999999999999
Q ss_pred cCCCCeEEEeecCccccCCCCcc-cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhh
Q 004155 558 DKDLNPKISDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFY 635 (771)
Q Consensus 558 ~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~ 635 (771)
+.++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++ |+.||..........
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 251 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 251 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHH
T ss_pred cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHH
Confidence 99999999999999865433221 2233457889999999999999999999999999999999 888987543322111
Q ss_pred HHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 004155 636 LLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRAD 699 (771)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 699 (771)
.. ..... ...+......+.+++.+||+.||++||++.|+++.|++...
T Consensus 252 ------~~---------~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 252 ------FV---------MEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp ------HH---------HTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred ------HH---------HcCCc-CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 00 11111 11122334568899999999999999999999999998654
No 128
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=6.2e-40 Score=353.51 Aligned_cols=244 Identities=24% Similarity=0.341 Sum_probs=178.5
Q ss_pred CCccccCCceeEEEEEc-CCCcEEEEEEcccCChhcHHHHHHHHHHHHcCC-CCcEEeEEEEEEeCCEEEEEEEeccCCC
Q 004155 426 DNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSKQGNREFVNEIGMISALQ-HPNLVKLHGCCIEGNQLLLIYEYMENNS 503 (771)
Q Consensus 426 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E~~~~gs 503 (771)
.+.||+|+||.||+|.. .+|+.||||++... ....+.+|+.+++.+. ||||+++++++.+....++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 47899999999999954 56899999998643 3467788999999997 9999999999999999999999999999
Q ss_pred HHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCC---CeEEEeecCccccCCCCcc
Q 004155 504 LARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL---NPKISDFGLAKLDEEDNTH 580 (771)
Q Consensus 504 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~DFGla~~~~~~~~~ 580 (771)
|.+++.. ...+++.++..|+.||+.||+|||+. +|+||||||+|||++.++ .+||+|||+++........
T Consensus 93 L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 165 (325)
T 3kn6_A 93 LFERIKK----KKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP 165 (325)
T ss_dssp HHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred HHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc
Confidence 9999943 35799999999999999999999998 899999999999997665 8999999999866543322
Q ss_pred cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhcCCC
Q 004155 581 ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRLGSN 660 (771)
Q Consensus 581 ~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 660 (771)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ...+++.......
T Consensus 166 -~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~------------~~~~~~~~i~~~~ 232 (325)
T 3kn6_A 166 -LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCT------------SAVEIMKKIKKGD 232 (325)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CC------------CHHHHHHHHTTTC
T ss_pred -ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccc------------cHHHHHHHHHcCC
Confidence 234568999999999999999999999999999999999999997543221100 1111111111111
Q ss_pred --CC----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 661 --FD----KEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 661 --~~----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.. ......+.+++.+||+.||++||++.|+++
T Consensus 233 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 233 FSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp CCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 11 112456889999999999999999999984
No 129
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3e-40 Score=353.81 Aligned_cols=269 Identities=25% Similarity=0.365 Sum_probs=214.3
Q ss_pred CCHHHHHHHhcCCCCCCccccCCceeEEEEEc------CCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcC-CCCcEEeE
Q 004155 411 FTLRQIKAATNNFAPDNKIGEGGFGPVYKGHM------ADGTVVAVKQLSSKS-KQGNREFVNEIGMISAL-QHPNLVKL 482 (771)
Q Consensus 411 ~~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l 482 (771)
+...+.....++|.+.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++.++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 44455555678999999999999999999952 457899999997653 33456789999999999 79999999
Q ss_pred EEEEEeCC-EEEEEEEeccCCCHHHHhcCCCcc------------CCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccC
Q 004155 483 HGCCIEGN-QLLLIYEYMENNSLARALFGPEAH------------RLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRD 549 (771)
Q Consensus 483 ~~~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~D 549 (771)
++++...+ ..++||||+++|+|.+++...... ...+++..++.++.||+.||+|||+. +|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 99988654 589999999999999999654321 12388999999999999999999998 899999
Q ss_pred CCCCcEEEcCCCCeEEEeecCccccCCCCcc-cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCC
Q 004155 550 IKATNVLLDKDLNPKISDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSC 627 (771)
Q Consensus 550 lkp~NIll~~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~ 627 (771)
|||+||+++.++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 9999999999999999999999866543322 2234568899999999999999999999999999999998 9999976
Q ss_pred CCccchhhHHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 628 KPKEDIFYLLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
....... .. .+........+......+.+++.+||+.||.+||++.|+++.|+.+
T Consensus 254 ~~~~~~~--~~-------------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 308 (316)
T 2xir_A 254 VKIDEEF--CR-------------RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308 (316)
T ss_dssp CCCSHHH--HH-------------HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhHHH--HH-------------HhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 4433211 00 0111111111222334688999999999999999999999999875
No 130
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.5e-39 Score=342.96 Aligned_cols=251 Identities=22% Similarity=0.336 Sum_probs=203.9
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
.++|++.+.||+|+||.||+|. ..+|+.||+|++... .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 5789999999999999999995 456899999998654 3344567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCC---eEEEeecCccc
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN---PKISDFGLAKL 573 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DFGla~~ 573 (771)
||+++++|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++..
T Consensus 85 e~~~~~~l~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 85 DLVTGGELFEDIV----AREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 9999999999883 235689999999999999999999998 8999999999999976655 99999999986
Q ss_pred cCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHh
Q 004155 574 DEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELV 653 (771)
Q Consensus 574 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (771)
...... .....||+.|+|||++.+..++.++||||||+++|+|++|+.||........... .. .+..
T Consensus 158 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~------~~-~~~~---- 224 (284)
T 3kk8_A 158 VNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ------IK-AGAY---- 224 (284)
T ss_dssp CCSSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH------HH-HTCC----
T ss_pred cccCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHH------HH-hccc----
Confidence 654332 2345689999999999999999999999999999999999999975433221110 00 0000
Q ss_pred hhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 654 DKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 654 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.............+.+++.+||+.||++||++.|+++
T Consensus 225 --~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 225 --DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp --CCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --cCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0000000122345889999999999999999999987
No 131
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.6e-39 Score=343.17 Aligned_cols=264 Identities=22% Similarity=0.272 Sum_probs=207.0
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEE-EeCCEEEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCC-IEGNQLLLIYE 497 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lV~E 497 (771)
.++|++.+.||+|+||.||+|. ..+|+.||||++..... ...+.+|+.+++.++|++++..+.++ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 5789999999999999999995 46799999999865433 24688999999999987766555554 67788999999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEE---cCCCCeEEEeecCcccc
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLAKLD 574 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DFGla~~~ 574 (771)
|+ +++|.+++... ...+++..++.++.||+.||+|||++ +|+||||||+||++ +.++.+||+|||+++..
T Consensus 86 ~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 86 LL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred ec-CCCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 99 89999999422 34699999999999999999999998 89999999999999 58899999999999876
Q ss_pred CCCCcc------cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCC
Q 004155 575 EEDNTH------ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGN 648 (771)
Q Consensus 575 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 648 (771)
...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.......................
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 238 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc
Confidence 544321 12345799999999999999999999999999999999999999986443222221111111111111
Q ss_pred hhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCCC
Q 004155 649 LMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADVQ 701 (771)
Q Consensus 649 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 701 (771)
. +.+...+ ...+.+++.+||+.||++||++.++++.|+.+....
T Consensus 239 ~-----~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 239 I-----EVLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp H-----HHHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred h-----HHHHhhC----CHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 0 1111222 245889999999999999999999999998865443
No 132
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=6.5e-40 Score=356.69 Aligned_cols=245 Identities=27% Similarity=0.435 Sum_probs=199.2
Q ss_pred cCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
+.|...+.||+|+||.||+|. ..+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 458888999999999999995 4679999999987542 233467899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 576 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~ 576 (771)
||+. |+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 134 e~~~-g~l~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp ECCS-EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred ecCC-CCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 9997 588888732 235799999999999999999999998 899999999999999999999999999986543
Q ss_pred CCcccccccccCCCccchhhhc---cCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHh
Q 004155 577 DNTHISTRVAGTFGYMAPEYAM---RGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELV 653 (771)
Q Consensus 577 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (771)
. ....||+.|+|||++. ...++.++|||||||++|||++|+.||......... .......
T Consensus 207 ~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~------~~~~~~~------ 269 (348)
T 1u5q_A 207 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL------YHIAQNE------ 269 (348)
T ss_dssp B-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH------HHHHHSC------
T ss_pred C-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH------HHHHhcC------
Confidence 2 2356899999999985 567899999999999999999999999754322111 1111110
Q ss_pred hhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 654 DKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 654 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.+.. ........+.+++.+||+.||++|||+.++++
T Consensus 270 ~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 270 SPAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp CCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 0111 11122345788999999999999999999986
No 133
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=6.9e-40 Score=344.94 Aligned_cols=247 Identities=24% Similarity=0.407 Sum_probs=201.1
Q ss_pred HhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLL 494 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 494 (771)
+.++|++.+.||+|+||.||+|. ..+++.||||++.... ......+.+|+.++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 34678899999999999999994 5567899999986532 2235678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCcccc
Q 004155 495 IYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 574 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~ 574 (771)
||||+++|+|.+++. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 87 v~e~~~~~~l~~~l~----~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQ----KLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp EECCCTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EEecCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 999999999999983 234689999999999999999999998 8999999999999999999999999998654
Q ss_pred CCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhh
Q 004155 575 EEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVD 654 (771)
Q Consensus 575 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 654 (771)
.... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||......+..... ..
T Consensus 160 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---------------~~ 221 (279)
T 3fdn_A 160 PSSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI---------------SR 221 (279)
T ss_dssp -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH---------------HH
T ss_pred Cccc---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHH---------------Hh
Confidence 3322 23456899999999999999999999999999999999999999754332211100 00
Q ss_pred hhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 655 KRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 655 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.....+......+.+++.+||+.||++||++.|+++
T Consensus 222 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 222 --VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp --TCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred --CCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 011122223345789999999999999999999997
No 134
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=347.89 Aligned_cols=263 Identities=25% Similarity=0.341 Sum_probs=198.9
Q ss_pred HhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC-----hhcHHHHHHHHHHHHcC---CCCcEEeEEEEEEeC
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS-----KQGNREFVNEIGMISAL---QHPNLVKLHGCCIEG 489 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~ 489 (771)
.+++|++.++||+|+||+||+|.. .+|+.||||++.... ......+.+|+.+++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467999999999999999999964 578999999986432 11234567787777766 499999999999876
Q ss_pred C-----EEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeE
Q 004155 490 N-----QLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPK 564 (771)
Q Consensus 490 ~-----~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 564 (771)
. ..++||||+. |+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~k 160 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAP--PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVK 160 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEE
Confidence 5 5899999997 59999995433 23499999999999999999999998 899999999999999999999
Q ss_pred EEeecCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHH
Q 004155 565 ISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILK 644 (771)
Q Consensus 565 l~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~ 644 (771)
|+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|++||......+.... .....
T Consensus 161 l~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~---i~~~~ 235 (308)
T 3g33_A 161 LADFGLARIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK---IFDLI 235 (308)
T ss_dssp ECSCSCTTTSTTCCC--SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHH---HHHHH
T ss_pred EeeCccccccCCCcc--cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHHh
Confidence 999999986643322 2445789999999999999999999999999999999999999976543322111 11110
Q ss_pred h---hCChhH---HhhhhcCC--CCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 645 A---QGNLME---LVDKRLGS--NFD-----KEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 645 ~---~~~~~~---~~d~~l~~--~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
. ...+.. ........ ... .+....+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 236 GLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 0 000000 00000000 000 112346789999999999999999999986
No 135
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.3e-40 Score=371.49 Aligned_cols=248 Identities=25% Similarity=0.321 Sum_probs=195.0
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccC---ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSK---SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 495 (771)
.++|++.++||+|+||.||+|. ..+|+.||||++... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 3578899999999999999994 567899999998753 233446678899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhh-cCCCceeccCCCCCcEEEcCCCCeEEEeecCcccc
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHE-ESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 574 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~ 574 (771)
|||+++|+|.+++. ....+++..+..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|||+|+..
T Consensus 227 ~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLS----RERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 99999999999993 23579999999999999999999998 6 8999999999999999999999999999864
Q ss_pred CCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhh
Q 004155 575 EEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVD 654 (771)
Q Consensus 575 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 654 (771)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........... +..
T Consensus 300 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~---------------i~~ 363 (446)
T 4ejn_A 300 IKDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL---------------ILM 363 (446)
T ss_dssp CC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---------------HHH
T ss_pred cCCCc-ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHH---------------HHh
Confidence 33322 23346799999999999999999999999999999999999999975443222111 011
Q ss_pred hhcCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 004155 655 KRLGSNFDKEQVMVMINVALLCTDVSSTSRP-----SMSSVVS 692 (771)
Q Consensus 655 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 692 (771)
.. ..++......+.+++.+||+.||++|| ++.|+++
T Consensus 364 ~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 364 EE--IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CC--CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CC--CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 11 112222334688999999999999999 9999986
No 136
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3.1e-40 Score=353.59 Aligned_cols=257 Identities=20% Similarity=0.284 Sum_probs=195.4
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCC----E
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLHGCCIEGN----Q 491 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~ 491 (771)
.++|++.+.||+|+||.||+|. ..+++.||||++.... ......+.+|+.++++++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 4678999999999999999995 5678999999997642 233467899999999999999999999987543 3
Q ss_pred EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCc
Q 004155 492 LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 571 (771)
Q Consensus 492 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla 571 (771)
.++||||+++++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred cEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 5999999999999999942 34699999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCcc--cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCCh
Q 004155 572 KLDEEDNTH--ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNL 649 (771)
Q Consensus 572 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (771)
+........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .........
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~------~~~~~~~~~ 237 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA------YQHVREDPI 237 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH------HHHHHCCCC
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH------HHHhcCCCC
Confidence 866543222 223356899999999999999999999999999999999999999754332211 111111110
Q ss_pred hHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH-HhcC
Q 004155 650 MELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS-MLEG 696 (771)
Q Consensus 650 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~-~L~~ 696 (771)
.. ...... ....+.+++.+||+.||++||++.+++. .+..
T Consensus 238 ~~---~~~~~~----~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 278 (311)
T 3ork_A 238 PP---SARHEG----LSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278 (311)
T ss_dssp CH---HHHSTT----CCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred Cc---ccccCC----CCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence 00 000111 2345889999999999999997766553 4443
No 137
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=352.97 Aligned_cols=257 Identities=27% Similarity=0.445 Sum_probs=201.3
Q ss_pred cCCCCCCccccCCceeEEEEEcCC-----CcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHMAD-----GTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLL 494 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~~~-----g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 494 (771)
++|...+.||+|+||.||+|.... +..||||+++... ......+.+|+.++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 456778999999999999995432 3469999997643 3445678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCcccc
Q 004155 495 IYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 574 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~ 574 (771)
||||+++|+|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 124 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 124 ITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEECCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 99999999999999432 34689999999999999999999998 8999999999999999999999999999876
Q ss_pred CCCCcc--cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhH
Q 004155 575 EEDNTH--ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLME 651 (771)
Q Consensus 575 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (771)
...... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||......+...
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~---------------- 261 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK---------------- 261 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH----------------
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHH----------------
Confidence 543221 1222346788999999999999999999999999999999 999997543322111
Q ss_pred HhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 004155 652 LVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRAD 699 (771)
Q Consensus 652 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 699 (771)
.+........+......+.+++.+||+.||++||++.++++.|+.+..
T Consensus 262 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 309 (333)
T 1mqb_A 262 AINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309 (333)
T ss_dssp HHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 111111111222334568899999999999999999999999987543
No 138
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=6e-40 Score=354.01 Aligned_cols=258 Identities=26% Similarity=0.434 Sum_probs=202.2
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcE----EEEEEcccC-ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTV----VAVKQLSSK-SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLL 493 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~----vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 493 (771)
.++|++.++||+|+||.||+|.. .+++. ||+|.+... .....+.+.+|+.++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 35788999999999999999954 44543 577777543 3345678999999999999999999999998765 88
Q ss_pred EEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccc
Q 004155 494 LIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 573 (771)
Q Consensus 494 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~ 573 (771)
+|+||+.+|+|.+++... ...+++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~v~~~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEECCCSSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred EEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 999999999999999542 34689999999999999999999998 899999999999999999999999999987
Q ss_pred cCCCCcc-cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhH
Q 004155 574 DEEDNTH-ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLME 651 (771)
Q Consensus 574 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (771)
....... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||..........
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~---------------- 230 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------------- 230 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH----------------
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH----------------
Confidence 6443322 2233456889999999999999999999999999999999 999997654443221
Q ss_pred HhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 652 LVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 652 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
.+........+......+.+++.+||+.||++||++.|+++.|+.+...
T Consensus 231 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 231 ILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 1111111222223445688999999999999999999999999986543
No 139
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9e-40 Score=361.20 Aligned_cols=264 Identities=22% Similarity=0.322 Sum_probs=193.5
Q ss_pred HHhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCC-CCcEEeEEEEEEeCC--E
Q 004155 418 AATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQ-HPNLVKLHGCCIEGN--Q 491 (771)
Q Consensus 418 ~~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~ 491 (771)
...++|++.+.||+|+||.||+|. ..+|+.||||++... .......+.+|+.+++++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 456789999999999999999994 567999999998643 3344667889999999997 999999999998554 7
Q ss_pred EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCc
Q 004155 492 LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 571 (771)
Q Consensus 492 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla 571 (771)
.|+|||||+ ++|.+++. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|
T Consensus 86 ~~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIR-----ANILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp EEEEEECCS-EEHHHHHH-----HTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecccC-cCHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 899999997 58999983 24689999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCC--------------------cccccccccCCCccchhhhcc-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCc
Q 004155 572 KLDEEDN--------------------THISTRVAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNSSCKPK 630 (771)
Q Consensus 572 ~~~~~~~--------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~S~Gvil~elltG~~p~~~~~~ 630 (771)
+...... ....+...||+.|+|||++.+ ..++.++|||||||++|||++|++||.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 236 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 8653311 112234579999999999986 6789999999999999999999999976543
Q ss_pred cchhhHHHHHHHHHhhCC-----------hhHHhhh----------hcCCCC------------CHHHHHHHHHHHHHcc
Q 004155 631 EDIFYLLDWALILKAQGN-----------LMELVDK----------RLGSNF------------DKEQVMVMINVALLCT 677 (771)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~-----------~~~~~d~----------~l~~~~------------~~~~~~~l~~l~~~Cl 677 (771)
.+....+. ....... ....++. .....+ .......+.+++.+||
T Consensus 237 ~~~~~~i~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L 313 (388)
T 3oz6_A 237 MNQLERII---GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLL 313 (388)
T ss_dssp HHHHHHHH---HHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHC
T ss_pred HHHHHHHH---HhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhh
Confidence 32221110 0000000 0000000 000000 0011345789999999
Q ss_pred CCCCCCCCCHHHHHHH
Q 004155 678 DVSSTSRPSMSSVVSM 693 (771)
Q Consensus 678 ~~dP~~RPs~~evl~~ 693 (771)
+.||++|||+.|+++-
T Consensus 314 ~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 314 QFNPNKRISANDALKH 329 (388)
T ss_dssp CSSGGGSCCHHHHTTS
T ss_pred ccCcccCCCHHHHhCC
Confidence 9999999999999874
No 140
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=6e-40 Score=353.83 Aligned_cols=259 Identities=27% Similarity=0.420 Sum_probs=205.5
Q ss_pred cCCCCCCccccCCceeEEEEEc-CCCcE--EEEEEcccC-ChhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeCCEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHM-ADGTV--VAVKQLSSK-SKQGNREFVNEIGMISAL-QHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~--vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 495 (771)
++|.+.+.||+|+||.||+|.. .+|.. ||+|.+... .....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 5788899999999999999954 45664 499998753 233456789999999999 899999999999999999999
Q ss_pred EEeccCCCHHHHhcCCC------------ccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCe
Q 004155 496 YEYMENNSLARALFGPE------------AHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNP 563 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 563 (771)
|||+++|+|.+++.... .....+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeE
Confidence 99999999999996543 2235799999999999999999999998 89999999999999999999
Q ss_pred EEEeecCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHH
Q 004155 564 KISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALI 642 (771)
Q Consensus 564 kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~ 642 (771)
||+|||+++...... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+..
T Consensus 182 kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~-------- 251 (327)
T 1fvr_A 182 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY-------- 251 (327)
T ss_dssp EECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH--------
T ss_pred EEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHH--------
Confidence 999999997433211 1223457889999999998889999999999999999998 99999754332211
Q ss_pred HHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 643 LKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 643 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
+.+........+......+.+++.+||+.||++||++.|+++.|+.+...
T Consensus 252 --------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 252 --------EKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp --------HHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred --------HHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 11111111122223345688999999999999999999999998876443
No 141
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=379.87 Aligned_cols=247 Identities=25% Similarity=0.394 Sum_probs=199.5
Q ss_pred ccccCCceeEEEEEcC---CCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEeccCCC
Q 004155 428 KIGEGGFGPVYKGHMA---DGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEYMENNS 503 (771)
Q Consensus 428 ~lG~G~~g~Vy~~~~~---~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gs 503 (771)
.||+|+||.||+|... ++..||||+++... ....++|.+|+.++++++||||++++++|.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999553 46789999997653 3456789999999999999999999999976 56999999999999
Q ss_pred HHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCCcccc-
Q 004155 504 LARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHIS- 582 (771)
Q Consensus 504 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~- 582 (771)
|.+++... ...+++..++.|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..........
T Consensus 422 L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 422 LHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp HHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred HHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 99999543 34699999999999999999999998 899999999999999999999999999987654332222
Q ss_pred -cccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhcCCC
Q 004155 583 -TRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRLGSN 660 (771)
Q Consensus 583 -~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 660 (771)
....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+... .+.......
T Consensus 496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~----------------~i~~~~~~~ 559 (613)
T 2ozo_A 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA----------------FIEQGKRME 559 (613)
T ss_dssp ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHH----------------HHHTTCCCC
T ss_pred ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH----------------HHHcCCCCC
Confidence 22345689999999999999999999999999999998 999997654433211 111111122
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 661 FDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 661 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
.+......+.+++.+||+.||++||++.+|++.|+..
T Consensus 560 ~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 560 CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 2333456788999999999999999999999999874
No 142
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.3e-40 Score=350.88 Aligned_cols=261 Identities=21% Similarity=0.228 Sum_probs=199.1
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 495 (771)
.++|.+.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 47899999999999999999964 478999999987542 22347789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|||+++++|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 113 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 113 MRLINGVDLAAMLRR----QGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EECCCCEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 999999999999942 34689999999999999999999998 89999999999999999999999999998665
Q ss_pred CCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 576 EDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 576 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
...........||+.|+|||.+.+..++.++||||||+++|||++|+.||........ . .......... .
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~---~~~~~~~~~~----~ 255 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVM---G---AHINQAIPRP----S 255 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHH---H---HHHHSCCCCG----G
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHH---H---HHhccCCCCc----c
Confidence 4433333445689999999999999999999999999999999999999975322110 0 0011000000 0
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhcCCCCCC
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRP-SMSSVVSMLEGRADVQ 701 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~~~~~~ 701 (771)
.. .......+.+++.+||+.||++|| ++.++++.|+......
T Consensus 256 ~~----~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 256 TV----RPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp GT----STTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred cc----CCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 11 112233588899999999999999 9999999999875543
No 143
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=358.21 Aligned_cols=265 Identities=26% Similarity=0.413 Sum_probs=209.4
Q ss_pred hcCCCCCCccccCCceeEEEEE-----cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCC--EE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-----MADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGN--QL 492 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-----~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~ 492 (771)
.++|++.+.||+|+||.||+|. ..+|+.||||++........+.+.+|+.++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 3567888999999999999997 3468999999998766666788999999999999999999999987543 68
Q ss_pred EEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCcc
Q 004155 493 LLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 572 (771)
Q Consensus 493 ~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~ 572 (771)
++||||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 120 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp EEEECCCTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEECCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchh
Confidence 9999999999999999432 24689999999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCccc--ccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhC---
Q 004155 573 LDEEDNTHI--STRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQG--- 647 (771)
Q Consensus 573 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~--- 647 (771)
......... .....+|..|+|||.+.+..++.++||||||+++|||+||+.|+.....+ +........
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~-------~~~~~~~~~~~~ 266 (326)
T 2w1i_A 194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE-------FMRMIGNDKQGQ 266 (326)
T ss_dssp ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH-------HHHHHCTTCCTH
T ss_pred hccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH-------HHHhhccccchh
Confidence 765543221 22345777899999999888999999999999999999999987532100 000000000
Q ss_pred ----ChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 648 ----NLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 648 ----~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
.+.+.+........+......+.+++.+||+.||++||++.|+++.|+.+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l 320 (326)
T 2w1i_A 267 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320 (326)
T ss_dssp HHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred hhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11122222211222233445688999999999999999999999999864
No 144
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.1e-40 Score=360.30 Aligned_cols=250 Identities=25% Similarity=0.362 Sum_probs=193.9
Q ss_pred cCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC---hhcHHHHHHHHHH-HHcCCCCcEEeEEEEEEeCCEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS---KQGNREFVNEIGM-ISALQHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lV 495 (771)
++|++.+.||+|+||.||+|.. .+++.||||+++... ......+.+|..+ ++.++||||+++++++.+.+..|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 5688899999999999999954 568899999997642 2234456677776 4678999999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++++||+|||+++...
T Consensus 118 ~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 118 LDYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 999999999999932 34689999999999999999999998 89999999999999999999999999998643
Q ss_pred CCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 576 EDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 576 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+... .++..
T Consensus 191 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~---------------~i~~~ 254 (373)
T 2r5t_A 191 EHNS-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD---------------NILNK 254 (373)
T ss_dssp CCCC-CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHH---------------HHHHS
T ss_pred cCCC-ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHH---------------HHHhc
Confidence 3222 2344679999999999999999999999999999999999999997543322111 11111
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLE 695 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~ 695 (771)
.+ .++......+.+++.+||+.||++||++.+.++.+.
T Consensus 255 ~~--~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~ 292 (373)
T 2r5t_A 255 PL--QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIK 292 (373)
T ss_dssp CC--CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHH
T ss_pred cc--CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHh
Confidence 11 111222345788999999999999999865444433
No 145
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.4e-40 Score=356.53 Aligned_cols=263 Identities=29% Similarity=0.409 Sum_probs=210.5
Q ss_pred HHHhcCCCCCCccccCCceeEEEEEcC-CC-----cEEEEEEcccCC-hhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEe
Q 004155 417 KAATNNFAPDNKIGEGGFGPVYKGHMA-DG-----TVVAVKQLSSKS-KQGNREFVNEIGMISAL-QHPNLVKLHGCCIE 488 (771)
Q Consensus 417 ~~~~~~f~~~~~lG~G~~g~Vy~~~~~-~g-----~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 488 (771)
+...++|.+.+.||+|+||.||+|... ++ ..||+|++.... ....+.+.+|+.+++++ +||||+++++++.+
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 334578899999999999999999642 22 489999997653 34457799999999999 89999999999999
Q ss_pred CCEEEEEEEeccCCCHHHHhcCCCc----------cCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEc
Q 004155 489 GNQLLLIYEYMENNSLARALFGPEA----------HRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLD 558 (771)
Q Consensus 489 ~~~~~lV~E~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~ 558 (771)
.+..++||||+++|+|.+++..... ....+++..++.++.||+.||+|||+. +|+||||||+||+++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLT 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEE
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEEC
Confidence 9999999999999999999953211 134689999999999999999999998 899999999999999
Q ss_pred CCCCeEEEeecCccccCCCCcc-cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhH
Q 004155 559 KDLNPKISDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYL 636 (771)
Q Consensus 559 ~~~~~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~ 636 (771)
.++.+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||+| |..||..........
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~- 277 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY- 277 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHH-
T ss_pred CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHH-
Confidence 9999999999999865433222 2233457889999999999999999999999999999999 999997644332211
Q ss_pred HHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 637 LDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 637 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
..+........+......+.+++.+||+.||.+||++.|+++.|+..
T Consensus 278 --------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 278 --------------KLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp --------------HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --------------HHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 11111111111222345688999999999999999999999999864
No 146
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5.7e-40 Score=345.96 Aligned_cols=252 Identities=25% Similarity=0.401 Sum_probs=204.4
Q ss_pred HhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEe---------
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIE--------- 488 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------- 488 (771)
..++|++.+.||+|+||.||+|.. .+|+.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 456789999999999999999965 479999999997643 346789999999999999999999864
Q ss_pred -------CCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCC
Q 004155 489 -------GNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL 561 (771)
Q Consensus 489 -------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~ 561 (771)
....++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+. +|+||||||+||+++.++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCC
Confidence 345899999999999999995422 35789999999999999999999998 899999999999999999
Q ss_pred CeEEEeecCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHH
Q 004155 562 NPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWAL 641 (771)
Q Consensus 562 ~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~ 641 (771)
.+||+|||+++....... .....||+.|+|||.+.+..++.++||||||+++|||++|..|+.. . ....
T Consensus 160 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~-----~---~~~~- 228 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE-----T---SKFF- 228 (284)
T ss_dssp EEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH-----H---HHHH-
T ss_pred CEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh-----H---HHHH-
Confidence 999999999987654332 2335689999999999999999999999999999999999988631 0 0000
Q ss_pred HHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCCCC
Q 004155 642 ILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADVQD 702 (771)
Q Consensus 642 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 702 (771)
..+.+..+...++ ..+.+++.+||+.||++||++.|+++.|+......+
T Consensus 229 --------~~~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 229 --------TDLRDGIISDIFD----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp --------HHHHTTCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred --------HHhhcccccccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 0111111222222 347789999999999999999999999988655443
No 147
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.2e-40 Score=354.10 Aligned_cols=243 Identities=21% Similarity=0.285 Sum_probs=201.7
Q ss_pred HhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCCh--------hcHHHHHHHHHHHHcCCCCcEEeEEEEEEeC
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSK--------QGNREFVNEIGMISALQHPNLVKLHGCCIEG 489 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 489 (771)
..++|++.+.||+|+||.||+|. ..+|+.||||++..... .....+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 45689999999999999999995 56789999999876421 1234577899999999999999999999999
Q ss_pred CEEEEEEEeccCC-CHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEee
Q 004155 490 NQLLLIYEYMENN-SLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDF 568 (771)
Q Consensus 490 ~~~~lV~E~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 568 (771)
+..++||||+.+| +|.+++.. ...+++..+..|+.||+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDR----HPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHT----CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeec
Confidence 9999999999777 99999943 34699999999999999999999998 8999999999999999999999999
Q ss_pred cCccccCCCCcccccccccCCCccchhhhccCCC-CchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhC
Q 004155 569 GLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQG 647 (771)
Q Consensus 569 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 647 (771)
|+++....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....
T Consensus 175 g~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----------------- 235 (335)
T 3dls_A 175 GSAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE----------------- 235 (335)
T ss_dssp TTCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-----------------
T ss_pred ccceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-----------------
Confidence 99987654332 233569999999999988776 8899999999999999999999964211
Q ss_pred ChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 004155 648 NLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSM 693 (771)
Q Consensus 648 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 693 (771)
....... .+......+.+++.+||+.||++||++.|+++.
T Consensus 236 ----~~~~~~~--~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 236 ----TVEAAIH--PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ----GTTTCCC--CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ----HHhhccC--CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111111 111123458899999999999999999999983
No 148
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.6e-39 Score=348.09 Aligned_cols=264 Identities=25% Similarity=0.394 Sum_probs=200.5
Q ss_pred HHHHhcCCCCCCccccCCceeEEEEEcC----CCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeC
Q 004155 416 IKAATNNFAPDNKIGEGGFGPVYKGHMA----DGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIEG 489 (771)
Q Consensus 416 l~~~~~~f~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 489 (771)
+....++|.+.+.||+|+||.||+|... +++.||+|+++.. .....+.+.+|+.++++++||||+++++++.+.
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 3345677889999999999999999543 3458999998754 334456799999999999999999999999865
Q ss_pred C-----EEEEEEEeccCCCHHHHhcCCC--ccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCC
Q 004155 490 N-----QLLLIYEYMENNSLARALFGPE--AHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN 562 (771)
Q Consensus 490 ~-----~~~lV~E~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 562 (771)
+ ..++||||+++|+|.+++.... .....+++..++.++.||+.||.|||+. +|+||||||+||+++.++.
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~ 185 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMT 185 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSC
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCc
Confidence 4 3599999999999999984322 2345799999999999999999999998 8999999999999999999
Q ss_pred eEEEeecCccccCCCCcc-cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHH
Q 004155 563 PKISDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWA 640 (771)
Q Consensus 563 ~kl~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~ 640 (771)
+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||............
T Consensus 186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~--- 262 (313)
T 3brb_A 186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYL--- 262 (313)
T ss_dssp EEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH---
T ss_pred EEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH---
Confidence 999999999866443221 2233457889999999999999999999999999999999 88898765443321110
Q ss_pred HHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 004155 641 LILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRA 698 (771)
Q Consensus 641 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 698 (771)
. .......+......+.+++.+||+.||++||++.++++.|+.+.
T Consensus 263 ------------~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 263 ------------L-HGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp ------------H-TTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------------H-cCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0 01111122233456889999999999999999999999998753
No 149
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1e-39 Score=352.24 Aligned_cols=270 Identities=21% Similarity=0.320 Sum_probs=210.4
Q ss_pred ccccccCCCCHHHHHHHhcCCCCC-CccccCCceeEEEEE-cCCCcEEEEEEcccCC--hhcHHHHHHHHHHHHcCC-CC
Q 004155 403 GVDLHTGSFTLRQIKAATNNFAPD-NKIGEGGFGPVYKGH-MADGTVVAVKQLSSKS--KQGNREFVNEIGMISALQ-HP 477 (771)
Q Consensus 403 ~~~~~~~~~~~~~l~~~~~~f~~~-~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~-h~ 477 (771)
+++...+...++..+...++|.+. +.||+|+||.||+|. ..+|+.||+|++.... ......+.+|+.++.+++ ||
T Consensus 10 ~~~~~~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~ 89 (327)
T 3lm5_A 10 GVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCP 89 (327)
T ss_dssp ------CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCT
T ss_pred cccccchhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCC
Confidence 445556667777778888889887 889999999999995 4568999999987542 334678999999999994 69
Q ss_pred cEEeEEEEEEeCCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEE
Q 004155 478 NLVKLHGCCIEGNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLL 557 (771)
Q Consensus 478 niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll 557 (771)
||+++++++.+.+..++||||+++|+|.+++... ....+++..++.++.|++.||+|||+. +|+||||||+||++
T Consensus 90 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~ 164 (327)
T 3lm5_A 90 RVINLHEVYENTSEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILL 164 (327)
T ss_dssp TBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSC--C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEE
Confidence 9999999999999999999999999999998443 235699999999999999999999998 89999999999999
Q ss_pred cC---CCCeEEEeecCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchh
Q 004155 558 DK---DLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIF 634 (771)
Q Consensus 558 ~~---~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~ 634 (771)
+. ++.+||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+..
T Consensus 165 ~~~~~~~~~kL~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~ 242 (327)
T 3lm5_A 165 SSIYPLGDIKIVDFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY 242 (327)
T ss_dssp SCBTTBCCEEECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred ecCCCCCcEEEeeCccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH
Confidence 87 78999999999987654322 23356999999999999999999999999999999999999999754432221
Q ss_pred hHHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 635 YLLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
... ... ...............+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~i------~~~-------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 243 LNI------SQV-------NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HHH------HHT-------CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHH------Hhc-------ccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 100 000 000111111223445889999999999999999999986
No 150
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.1e-39 Score=344.20 Aligned_cols=247 Identities=23% Similarity=0.342 Sum_probs=199.9
Q ss_pred HhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeCCEEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSK--SKQGNREFVNEIGMISAL-QHPNLVKLHGCCIEGNQLLL 494 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 494 (771)
..++|++.+.||+|+||.||+|.. .+++.||||++... .......+.+|+..+.++ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 456789999999999999999955 47999999998754 234466788999999999 89999999999999999999
Q ss_pred EEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcC---------------
Q 004155 495 IYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDK--------------- 559 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~--------------- 559 (771)
||||+++++|.+++.........+++..++.|+.||+.||+|||++ +|+||||||+||+++.
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 9999999999999954333335799999999999999999999998 8999999999999984
Q ss_pred ----CCCeEEEeecCccccCCCCcccccccccCCCccchhhhccC-CCCchHhHHHHHHHHHHHHhCCCCCCCCCccchh
Q 004155 560 ----DLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIF 634 (771)
Q Consensus 560 ----~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~ 634 (771)
...+||+|||.++...... ...||+.|+|||.+.+. .++.++|||||||++|||++|.+++.... .
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~- 236 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---Q- 236 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---H-
T ss_pred ccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---H-
Confidence 4479999999998765432 23589999999999876 66789999999999999999998764221 0
Q ss_pred hHHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 635 YLLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
+. .+..... ...+......+.+++.+||+.||++||++.|+++
T Consensus 237 ----~~----------~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 237 ----WH----------EIRQGRL-PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ----HH----------HHHTTCC-CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----HH----------HHHcCCC-CCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 00 0111111 1112223345889999999999999999999986
No 151
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.6e-39 Score=341.16 Aligned_cols=252 Identities=28% Similarity=0.365 Sum_probs=203.6
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 497 (771)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 46788999999999999999954 478999999986542 3345788999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCC
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 577 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~ 577 (771)
|+++++|.+++.. ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 86 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 86 YCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp CCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred ecCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 9999999999843 34689999999999999999999998 8999999999999999999999999999865432
Q ss_pred Cc-ccccccccCCCccchhhhccCCC-CchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 578 NT-HISTRVAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 578 ~~-~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
.. .......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||........ ....|. ....
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~----~~~~------- 226 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYSDWK----EKKT------- 226 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HHHHHH----TTCT-------
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHhh----hccc-------
Confidence 21 22334568999999999987664 7899999999999999999999976443221 111111 0000
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
...........+.+++.+||+.||++|||+.|+++
T Consensus 227 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 227 --YLNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp --TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --ccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 00001122345788999999999999999999976
No 152
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1e-39 Score=345.96 Aligned_cols=254 Identities=27% Similarity=0.380 Sum_probs=203.9
Q ss_pred hcCCCCCC-ccccCCceeEEEEEc---CCCcEEEEEEcccCC--hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEE
Q 004155 420 TNNFAPDN-KIGEGGFGPVYKGHM---ADGTVVAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLL 493 (771)
Q Consensus 420 ~~~f~~~~-~lG~G~~g~Vy~~~~---~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 493 (771)
.++|.+.+ .||+|+||.||+|.. .+++.||||+++... ....+++.+|+.++++++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 45677777 999999999999943 346889999997643 23357899999999999999999999999 567789
Q ss_pred EEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccc
Q 004155 494 LIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 573 (771)
Q Consensus 494 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~ 573 (771)
+||||+++++|.+++.. ...+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 94 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 99999999999999943 34689999999999999999999998 899999999999999999999999999987
Q ss_pred cCCCCccc--ccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChh
Q 004155 574 DEEDNTHI--STRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLM 650 (771)
Q Consensus 574 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (771)
........ .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~--------------- 231 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA--------------- 231 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH---------------
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH---------------
Confidence 65443322 122346788999999998889999999999999999999 999997644322111
Q ss_pred HHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 651 ELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 651 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
.+........+......+.+++.+||+.||++||++.++++.|++.
T Consensus 232 -~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 232 -MLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp -HHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred -HHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1111111122223345688999999999999999999999999875
No 153
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.6e-40 Score=353.19 Aligned_cols=271 Identities=21% Similarity=0.335 Sum_probs=197.9
Q ss_pred cCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCChhc-HHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEe
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSKQG-NREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEY 498 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 498 (771)
++|.+.++||+|+||.||+|.. .+++.||||++....... ...+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 5788999999999999999954 478999999987543221 22456799999999999999999999999999999999
Q ss_pred ccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCC
Q 004155 499 MENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 578 (771)
Q Consensus 499 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~ 578 (771)
++ |+|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 82 LD-KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp CS-EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred cc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence 97 5899988432 34689999999999999999999998 89999999999999999999999999998654332
Q ss_pred cccccccccCCCccchhhhcc-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh--
Q 004155 579 THISTRVAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK-- 655 (771)
Q Consensus 579 ~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-- 655 (771)
.. .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+...........+......
T Consensus 155 ~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 155 KT-YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred cc-cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchh
Confidence 22 233468999999999876 57899999999999999999999999765443322211110000000011111000
Q ss_pred ----hcCC--CC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HhcCCCC
Q 004155 656 ----RLGS--NF-----DKEQVMVMINVALLCTDVSSTSRPSMSSVVS--MLEGRAD 699 (771)
Q Consensus 656 ----~l~~--~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~~~~ 699 (771)
.... .. .......+.+++.+||+.||++|||+.|+++ .+.+...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 290 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE 290 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCS
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccc
Confidence 0000 00 0012245789999999999999999999987 4554433
No 154
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=3e-39 Score=344.31 Aligned_cols=248 Identities=29% Similarity=0.437 Sum_probs=205.4
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 497 (771)
.+.|...+.||+|+||.||+|. ..+++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 3568889999999999999995 4578999999987543 3446789999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCC
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 577 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~ 577 (771)
|+++++|.+++. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 101 ~~~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 101 YLGGGSALDLLE-----PGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp CCTTEEHHHHHT-----TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred eCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcc
Confidence 999999999993 24689999999999999999999998 8999999999999999999999999999866543
Q ss_pred CcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhc
Q 004155 578 NTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRL 657 (771)
Q Consensus 578 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 657 (771)
... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.......... .. ... .
T Consensus 173 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------~~-~~~---------~ 235 (303)
T 3a7i_A 173 QIK-RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF------LI-PKN---------N 235 (303)
T ss_dssp BCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH------HH-HHS---------C
T ss_pred ccc-cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHH------Hh-hcC---------C
Confidence 322 234568999999999999999999999999999999999999997543221111 00 001 0
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 658 GSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 658 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
...........+.+++.+||+.||++||++.|+++
T Consensus 236 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 236 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp CCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 11111122345889999999999999999999986
No 155
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.3e-40 Score=357.03 Aligned_cols=254 Identities=23% Similarity=0.304 Sum_probs=203.2
Q ss_pred hcCCCCCCccccCCceeEEEEEc----CCCcEEEEEEcccCC----hhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeCC
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM----ADGTVVAVKQLSSKS----KQGNREFVNEIGMISAL-QHPNLVKLHGCCIEGN 490 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~----~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 490 (771)
.++|.+.++||+|+||.||+|.. .+|+.||||+++... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35788999999999999999965 478999999987532 12345677899999999 6999999999999999
Q ss_pred EEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecC
Q 004155 491 QLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 570 (771)
Q Consensus 491 ~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGl 570 (771)
..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQ----RERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred eEEEEeecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 99999999999999999942 34689999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCcccccccccCCCccchhhhcc--CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCC
Q 004155 571 AKLDEEDNTHISTRVAGTFGYMAPEYAMR--GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGN 648 (771)
Q Consensus 571 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 648 (771)
++..............||+.|+|||++.+ ..++.++|||||||++|||++|+.||............ ....
T Consensus 206 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~--~~~~----- 278 (355)
T 1vzo_A 206 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI--SRRI----- 278 (355)
T ss_dssp EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHH--HHHH-----
T ss_pred CeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHH--HHHH-----
Confidence 98765444444445679999999999985 35789999999999999999999999754432221111 1110
Q ss_pred hhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 004155 649 LMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRP-----SMSSVVSM 693 (771)
Q Consensus 649 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 693 (771)
... ...++......+.+++.+||+.||++|| ++.|+++.
T Consensus 279 ----~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 279 ----LKS--EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp ----HHC--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred ----hcc--CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 010 1122223345678999999999999999 88888863
No 156
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.5e-39 Score=355.70 Aligned_cols=264 Identities=20% Similarity=0.345 Sum_probs=205.1
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccC-ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSK-SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 497 (771)
.++|++.+.||+|+||.||+|.. .+|+.||+|++... .....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 35788999999999999999954 47899999999765 33446789999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCC
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 577 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~ 577 (771)
|+++++|.+++.. ...+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp CCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred CCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999999932 346899999999999999999999852 7999999999999999999999999999754322
Q ss_pred CcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHH------------------
Q 004155 578 NTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDW------------------ 639 (771)
Q Consensus 578 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~------------------ 639 (771)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.......
T Consensus 186 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 186 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp ---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred ---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence 12335689999999999999999999999999999999999999976443322111100
Q ss_pred -----HHHHHhhCChhHHhhhhcC----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 640 -----ALILKAQGNLMELVDKRLG----SNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 640 -----~~~~~~~~~~~~~~d~~l~----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
...........+.++.... ..........+.+++.+||+.||++|||+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0000000111122221110 1111122346889999999999999999999986
No 157
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=4.4e-39 Score=341.31 Aligned_cols=252 Identities=25% Similarity=0.368 Sum_probs=199.0
Q ss_pred CCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEecc
Q 004155 422 NFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEYME 500 (771)
Q Consensus 422 ~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~ 500 (771)
+|.....||+|+||.||+|. ..+++.||||++........+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 34555699999999999995 56789999999987665566789999999999999999999999999999999999999
Q ss_pred CCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcC-CCCeEEEeecCccccCCCCc
Q 004155 501 NNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDK-DLNPKISDFGLAKLDEEDNT 579 (771)
Q Consensus 501 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~DFGla~~~~~~~~ 579 (771)
+++|.+++.... ....+++..+..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 103 ~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 103 GGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp EEEHHHHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCHHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 999999995432 223567889999999999999999998 8999999999999987 89999999999986654322
Q ss_pred ccccccccCCCccchhhhccCC--CCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhc
Q 004155 580 HISTRVAGTFGYMAPEYAMRGY--LTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRL 657 (771)
Q Consensus 580 ~~~~~~~gt~~y~aPE~~~~~~--~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 657 (771)
......||+.|+|||++.+.. ++.++||||||+++|||++|+.||......... . +.. .....
T Consensus 179 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~-~~~-----------~~~~~ 243 (295)
T 2clq_A 179 -CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA--M-FKV-----------GMFKV 243 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH--H-HHH-----------HHHCC
T ss_pred -cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH--H-Hhh-----------ccccc
Confidence 123456899999999997653 889999999999999999999999643221110 0 000 00011
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 658 GSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 658 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
....+......+.+++.+||+.||++||++.|+++
T Consensus 244 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 244 HPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp CCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11222233456889999999999999999999985
No 158
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.1e-39 Score=344.60 Aligned_cols=256 Identities=27% Similarity=0.365 Sum_probs=201.6
Q ss_pred cCCCCCCccccCCceeEEEEEcCC----CcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEE-eCCEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHMAD----GTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCI-EGNQLLL 494 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~~~----g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~l 494 (771)
.+|++.++||+|+||.||+|...+ +..||+|.+.... ....+.+.+|+.++++++||||+++++++. .++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 457788999999999999996432 2368999987643 344578999999999999999999999865 4567899
Q ss_pred EEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCcccc
Q 004155 495 IYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 574 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~ 574 (771)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 105 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 178 (298)
T ss_dssp EEECCTTCBHHHHHHCT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred EEeCCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccc
Confidence 99999999999999542 34689999999999999999999998 8999999999999999999999999999866
Q ss_pred CCCCc---ccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChh
Q 004155 575 EEDNT---HISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLM 650 (771)
Q Consensus 575 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (771)
..... .......||+.|+|||.+.+..++.++||||||+++|||++ |.+||......+....
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~-------------- 244 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY-------------- 244 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHH--------------
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHH--------------
Confidence 44322 11233457889999999999999999999999999999999 5556654333222110
Q ss_pred HHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 004155 651 ELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRA 698 (771)
Q Consensus 651 ~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 698 (771)
+........+......+.+++.+||+.||++||++.|++++|+.+.
T Consensus 245 --~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 290 (298)
T 3f66_A 245 --LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 290 (298)
T ss_dssp --HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --HhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0001111111222346889999999999999999999999998754
No 159
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=3.1e-39 Score=368.66 Aligned_cols=250 Identities=24% Similarity=0.347 Sum_probs=205.2
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 495 (771)
.++|...+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|+.++++++||||+++++++.+.+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 36788899999999999999965 569999999996532 23356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|||+++|+|.+++.........+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999976554456799999999999999999999998 89999999999999999999999999998765
Q ss_pred CCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccch-hhHHHHHHHHHhhCChhHHhh
Q 004155 576 EDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDI-FYLLDWALILKAQGNLMELVD 654 (771)
Q Consensus 576 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d 654 (771)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..+.. .+..
T Consensus 341 ~~~~~-~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~------------~i~~ 407 (543)
T 3c4z_A 341 AGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ------------RVLE 407 (543)
T ss_dssp TTCCC-BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHH------------HHHH
T ss_pred CCCcc-cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHH------------HHhh
Confidence 43322 2345799999999999999999999999999999999999999976432211 11111 1111
Q ss_pred hhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 004155 655 KRLGSNFDKEQVMVMINVALLCTDVSSTSRPSM 687 (771)
Q Consensus 655 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~ 687 (771)
.. ..++......+.+++.+||+.||++||++
T Consensus 408 ~~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 408 QA--VTYPDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp CC--CCCCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred cc--cCCCcccCHHHHHHHHHhccCCHhHCCCC
Confidence 11 11222334567889999999999999975
No 160
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-39 Score=358.37 Aligned_cols=255 Identities=28% Similarity=0.390 Sum_probs=194.3
Q ss_pred CCCCCCccccCCceeEEEEEcC--CC--cEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEe-CCEEEEE
Q 004155 422 NFAPDNKIGEGGFGPVYKGHMA--DG--TVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIE-GNQLLLI 495 (771)
Q Consensus 422 ~f~~~~~lG~G~~g~Vy~~~~~--~g--~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lV 495 (771)
.|...++||+|+||.||+|... ++ ..||||.++... ....+.|.+|+.++++++||||+++++++.+ ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4566789999999999999642 22 468999987543 3456789999999999999999999998754 4578999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|||+++|+|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 170 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EECCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EECCCCCCHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccc
Confidence 9999999999999543 34688999999999999999999998 89999999999999999999999999998654
Q ss_pred CCCcc---cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhH
Q 004155 576 EDNTH---ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLME 651 (771)
Q Consensus 576 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (771)
..... ......+|+.|+|||++.+..++.++|||||||++|||+| |.+||......+..... . .+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~------~-~~~--- 313 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL------L-QGR--- 313 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHH------H-TTC---
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHH------H-cCC---
Confidence 33211 1233457889999999999999999999999999999999 67777654433321110 0 110
Q ss_pred HhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 004155 652 LVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRA 698 (771)
Q Consensus 652 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 698 (771)
....+......+.+++.+||+.||++||++.|+++.|+.+.
T Consensus 314 ------~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~ 354 (373)
T 3c1x_A 314 ------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 354 (373)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 01111223446889999999999999999999999998764
No 161
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-39 Score=342.91 Aligned_cols=255 Identities=25% Similarity=0.358 Sum_probs=202.1
Q ss_pred CCCCCCccccCCceeEEEEEcC-C---CcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEE-EEE
Q 004155 422 NFAPDNKIGEGGFGPVYKGHMA-D---GTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQL-LLI 495 (771)
Q Consensus 422 ~f~~~~~lG~G~~g~Vy~~~~~-~---g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lV 495 (771)
.|...++||+|+||.||+|... + +..||+|++.... ....+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 3556689999999999999542 2 3379999987643 34467889999999999999999999999876655 999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|||+.+|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSP---QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp ECCCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EecccCCCHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 9999999999999542 34689999999999999999999998 89999999999999999999999999998654
Q ss_pred CCCc---ccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCC-CCccchhhHHHHHHHHHhhCChhH
Q 004155 576 EDNT---HISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSC-KPKEDIFYLLDWALILKAQGNLME 651 (771)
Q Consensus 576 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 651 (771)
.... .......+|+.|+|||.+.+..++.++||||||+++|||++|..|+.. ....+.. .
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~----------------~ 239 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLT----------------H 239 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHH----------------H
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHH----------------H
Confidence 3221 122335678899999999999999999999999999999996655433 3222211 1
Q ss_pred HhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 004155 652 LVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRA 698 (771)
Q Consensus 652 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 698 (771)
.+........+......+.+++.+||+.||.+|||+.+++++|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 286 (298)
T 3pls_A 240 FLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV 286 (298)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11111111122223456889999999999999999999999998754
No 162
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4.3e-39 Score=363.52 Aligned_cols=259 Identities=21% Similarity=0.274 Sum_probs=196.5
Q ss_pred hcCCCCCCccccCCceeEEEE-EcCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeC------C
Q 004155 420 TNNFAPDNKIGEGGFGPVYKG-HMADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIEG------N 490 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 490 (771)
.++|++.++||+|+||.||+| ...+|+.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 468999999999999999999 4567899999999754 334467788999999999999999999999654 4
Q ss_pred EEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecC
Q 004155 491 QLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 570 (771)
Q Consensus 491 ~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGl 570 (771)
..|+||||+++ +|.+.+. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSE-EHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCC-CHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 68999999976 5777762 2489999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhh----
Q 004155 571 AKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQ---- 646 (771)
Q Consensus 571 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~---- 646 (771)
|+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....+ .......
T Consensus 211 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i--~~~lg~p~~~~ 286 (464)
T 3ttj_A 211 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKV--IEQLGTPCPEF 286 (464)
T ss_dssp C-----CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--HHHHCSCCHHH
T ss_pred eeecCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HHhcCCCCHHH
Confidence 98664432 234467999999999999999999999999999999999999999765432221111 0000000
Q ss_pred -C-------------------ChhHHhhhhcCCCCC---HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 647 -G-------------------NLMELVDKRLGSNFD---KEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 647 -~-------------------~~~~~~d~~l~~~~~---~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
. .........+..... ......+.+|+.+||+.||++|||+.|+++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 287 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 000111111000000 112457899999999999999999999987
No 163
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=361.47 Aligned_cols=275 Identities=20% Similarity=0.242 Sum_probs=212.9
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCC--EEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEGN--QLLLI 495 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV 495 (771)
.++|.+.++||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 35788999999999999999954 458999999997543 234577889999999999999999999998755 78999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEE----cCCCCeEEEeecCc
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLL----DKDLNPKISDFGLA 571 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~DFGla 571 (771)
|||+++|+|.+++..... ...+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 88 ~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp ECCCTTEEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EecCCCCCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 999999999999954332 23499999999999999999999998 89999999999999 77888999999999
Q ss_pred cccCCCCcccccccccCCCccchhhhcc--------CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccc-hhhHHHHHHH
Q 004155 572 KLDEEDNTHISTRVAGTFGYMAPEYAMR--------GYLTDKADVYSFGIVALEIVSGRSNSSCKPKED-IFYLLDWALI 642 (771)
Q Consensus 572 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~ 642 (771)
+....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..........
T Consensus 164 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 164 RELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp EECCCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred eEccCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 87654332 234569999999999865 567889999999999999999999997533221 1111111110
Q ss_pred HHhhCChhHH---------hhhhc--CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 643 LKAQGNLMEL---------VDKRL--GSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 643 ~~~~~~~~~~---------~d~~l--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
......+..+ ....+ ...........+.+++.+||+.||++||++.|+++.++.+...
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 0000000000 00001 1233466777899999999999999999999999998886554
No 164
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=4.7e-39 Score=339.08 Aligned_cols=251 Identities=23% Similarity=0.332 Sum_probs=200.7
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCCh------hcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSK------QGNREFVNEIGMISALQHPNLVKLHGCCIEGNQL 492 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 492 (771)
.++|++.+.||+|+||.||+|.. .+|+.||+|+++.... ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 35688999999999999999955 4689999999875421 2367899999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCC----CeEEEee
Q 004155 493 LLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL----NPKISDF 568 (771)
Q Consensus 493 ~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~DF 568 (771)
++||||+++++|.+++. ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 84 ~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 84 VLILELVSGGELFDFLA----EKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp EEEEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEeecCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEec
Confidence 99999999999999993 235689999999999999999999998 899999999999998877 8999999
Q ss_pred cCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCC
Q 004155 569 GLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGN 648 (771)
Q Consensus 569 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 648 (771)
|+++....... .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+..... ......
T Consensus 157 g~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-----~~~~~~ 229 (283)
T 3bhy_A 157 GIAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI-----SAVNYD 229 (283)
T ss_dssp TTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH-----HTTCCC
T ss_pred ccceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHh-----HhcccC
Confidence 99986644322 23356899999999999999999999999999999999999999754332211100 000000
Q ss_pred hhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 649 LMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 649 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
. +...... ....+.+++.+||+.||++||++.|+++
T Consensus 230 ~----~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 230 F----DEEYFSN----TSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp C----CHHHHTT----CCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred C----cchhccc----CCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 0 0000011 1345789999999999999999999987
No 165
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=5.4e-39 Score=348.21 Aligned_cols=267 Identities=27% Similarity=0.385 Sum_probs=211.0
Q ss_pred CCCHHHHHHHhcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHc--CCCCcEEeEEEEEE
Q 004155 410 SFTLRQIKAATNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISA--LQHPNLVKLHGCCI 487 (771)
Q Consensus 410 ~~~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~ 487 (771)
......-....++|.+.+.||+|+||.||+|.. +|+.||||++... ....+.+|++++.. ++||||+++++++.
T Consensus 31 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~ 106 (342)
T 1b6c_B 31 GLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADN 106 (342)
T ss_dssp SSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEE
T ss_pred CCceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeec
Confidence 344444556678999999999999999999987 5899999998643 34677889998887 78999999999998
Q ss_pred eCC----EEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhh--------hcCCCceeccCCCCCcE
Q 004155 488 EGN----QLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLH--------EESRLKIVHRDIKATNV 555 (771)
Q Consensus 488 ~~~----~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH--------~~~~~~ivH~Dlkp~NI 555 (771)
..+ ..++||||+++|+|.+++. ...+++..++.++.|++.||+||| +. +|+||||||+||
T Consensus 107 ~~~~~~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NI 178 (342)
T 1b6c_B 107 KDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNI 178 (342)
T ss_dssp CCCSSCCCEEEEECCCTTCBHHHHHH-----HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGE
T ss_pred ccCCccceeEEEEeecCCCcHHHHHh-----ccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHE
Confidence 776 8999999999999999993 246899999999999999999999 55 899999999999
Q ss_pred EEcCCCCeEEEeecCccccCCCCcc---cccccccCCCccchhhhccCC------CCchHhHHHHHHHHHHHHhC-----
Q 004155 556 LLDKDLNPKISDFGLAKLDEEDNTH---ISTRVAGTFGYMAPEYAMRGY------LTDKADVYSFGIVALEIVSG----- 621 (771)
Q Consensus 556 ll~~~~~~kl~DFGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~~~ksDV~S~Gvil~elltG----- 621 (771)
+++.++.+||+|||+++........ ......||+.|+|||++.+.. ++.++|||||||++|||+||
T Consensus 179 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~ 258 (342)
T 1b6c_B 179 LVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 258 (342)
T ss_dssp EECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTT
T ss_pred EECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCC
Confidence 9999999999999999866543322 123457999999999998652 34789999999999999999
Q ss_pred -----CCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhcCCCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 004155 622 -----RSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRLGSNF-----DKEQVMVMINVALLCTDVSSTSRPSMSSVV 691 (771)
Q Consensus 622 -----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl 691 (771)
+.||......... ...+... +....+.... ..+....+.+++.+||+.||++||++.||+
T Consensus 259 ~~~~~~~p~~~~~~~~~~-~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~ 328 (342)
T 1b6c_B 259 IHEDYQLPYYDLVPSDPS-VEEMRKV---------VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 328 (342)
T ss_dssp BCCCCCCTTTTTSCSSCC-HHHHHHH---------HTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred cccccccCccccCcCccc-HHHHHHH---------HHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHH
Confidence 6777653322110 1111111 1111111222 235667899999999999999999999999
Q ss_pred HHhcCCC
Q 004155 692 SMLEGRA 698 (771)
Q Consensus 692 ~~L~~~~ 698 (771)
+.|+.+.
T Consensus 329 ~~L~~i~ 335 (342)
T 1b6c_B 329 KTLSQLS 335 (342)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998754
No 166
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1e-39 Score=352.49 Aligned_cols=263 Identities=20% Similarity=0.286 Sum_probs=193.1
Q ss_pred HhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCCh--hcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSK--QGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 495 (771)
..++|++.++||+|+||.||+|. ..+|+.||||+++.... .....+.+|+.++++++||||+++++++.+.+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 34678999999999999999994 56789999999975432 2245678999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEE-----cCCCCeEEEeecC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLL-----DKDLNPKISDFGL 570 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll-----~~~~~~kl~DFGl 570 (771)
|||+++ +|.+++.. ...+++..+..|+.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+
T Consensus 112 ~e~~~~-~L~~~~~~----~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 112 FEYAEN-DLKKYMDK----NPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EECCSE-EHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EecCCC-CHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 999985 99999943 34689999999999999999999998 89999999999999 4555699999999
Q ss_pred ccccCCCCcccccccccCCCccchhhhccC-CCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhh--C
Q 004155 571 AKLDEEDNTHISTRVAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQ--G 647 (771)
Q Consensus 571 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--~ 647 (771)
++........ .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+... ......... .
T Consensus 184 a~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~--~~~~~~~~~~~~ 260 (329)
T 3gbz_A 184 ARAFGIPIRQ-FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF--KIFEVLGLPDDT 260 (329)
T ss_dssp HHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHHHCCCCTT
T ss_pred ccccCCcccc-cCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHH--HHHHHhCCCchh
Confidence 9866533222 2335689999999999874 58999999999999999999999997644322211 111110000 0
Q ss_pred ChhHHhh-hhcCCC------CCH------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 648 NLMELVD-KRLGSN------FDK------EQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 648 ~~~~~~d-~~l~~~------~~~------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
....... +..... ... .....+.+++.+||+.||++|||+.|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 261 TWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000000 000000 000 02246789999999999999999999986
No 167
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.1e-38 Score=360.77 Aligned_cols=260 Identities=22% Similarity=0.288 Sum_probs=209.2
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCC-CcEEeEEEEEEeCCEEEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISALQH-PNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lV~E 497 (771)
.++|.+.++||+|+||.||+|. ..+++.||||++...... ..+..|+++++.++| +++..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 4689999999999999999995 467999999987654332 357889999999976 667777777788899999999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEE---cCCCCeEEEeecCcccc
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLAKLD 574 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DFGla~~~ 574 (771)
|+ +++|.+++... ...+++.+++.|+.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++..
T Consensus 84 ~~-g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (483)
T 3sv0_A 84 LL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156 (483)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred CC-CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence 99 89999999432 34699999999999999999999998 89999999999999 68899999999999876
Q ss_pred CCCCcc------cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCC
Q 004155 575 EEDNTH------ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGN 648 (771)
Q Consensus 575 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 648 (771)
...... ......||..|+|||++.+..++.++|||||||++|||++|+.||.......................
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (483)
T 3sv0_A 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATS 236 (483)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSC
T ss_pred cCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccccc
Confidence 544322 12246799999999999999999999999999999999999999987554443333332222221222
Q ss_pred hhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 649 LMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 649 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
...+. ..+ ..++.+++..||+.+|++||++.+|+++|+.+
T Consensus 237 ~~~l~-----~~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 237 IEALC-----RGY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HHHHH-----TTS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHh-----cCC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 11111 122 34688999999999999999999999998775
No 168
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4e-39 Score=341.83 Aligned_cols=248 Identities=23% Similarity=0.375 Sum_probs=204.7
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccC---ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSK---SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 495 (771)
.++|.+.+.||+|+||.||+|.. .+++.||+|++... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 35788899999999999999954 46889999998654 234466789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|||+++++|.+++. ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 94 ~e~~~~~~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 94 LELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EECCTTCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 99999999999983 234789999999999999999999998 89999999999999999999999999998765
Q ss_pred CCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 576 EDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 576 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
..... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||......+... . +...
T Consensus 167 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~------~---------~~~~ 230 (294)
T 2rku_A 167 YDGER-KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL------R---------IKKN 230 (294)
T ss_dssp STTCC-BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------H---------HHTT
T ss_pred cCccc-cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH------H---------Hhhc
Confidence 33222 234568999999999999899999999999999999999999997543322110 0 0011
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.. ..+......+.+++.+||+.||++||++.|+++
T Consensus 231 ~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 231 EY--SIPKHINPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp CC--CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cC--CCccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 00 111122345788999999999999999999987
No 169
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.1e-39 Score=343.34 Aligned_cols=250 Identities=30% Similarity=0.427 Sum_probs=198.3
Q ss_pred hcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeC-CEEEEEEEe
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEG-NQLLLIYEY 498 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lV~E~ 498 (771)
.++|++.+.||+|+||.||+|.. +|+.||||+++... ..+.+.+|+.++++++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 46788899999999999999976 48999999997543 456789999999999999999999997654 478999999
Q ss_pred ccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCC
Q 004155 499 MENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDN 578 (771)
Q Consensus 499 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~ 578 (771)
+++++|.+++.... ...+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 97 ~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171 (278)
T ss_dssp CTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred CCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence 99999999994321 12488999999999999999999998 89999999999999999999999999998554322
Q ss_pred cccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhc
Q 004155 579 THISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRL 657 (771)
Q Consensus 579 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 657 (771)
....+++.|+|||.+.+..++.++||||||+++|||+| |+.||......+... .+....
T Consensus 172 ----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~----------------~~~~~~ 231 (278)
T 1byg_A 172 ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP----------------RVEKGY 231 (278)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHH----------------HHTTTC
T ss_pred ----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHH----------------HHhcCC
Confidence 22357889999999999999999999999999999998 999997654332211 111111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 658 GSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 658 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
....+......+.+++.+||+.||++||++.|+++.|+.+
T Consensus 232 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i 271 (278)
T 1byg_A 232 KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271 (278)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence 1122223345688999999999999999999999999875
No 170
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.3e-39 Score=344.48 Aligned_cols=254 Identities=22% Similarity=0.317 Sum_probs=187.7
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCC-hhc-HHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKS-KQG-NREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~-~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
.++|++.+.||+|+||.||+|. ..+|+.||||++.... ... .+.+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 4678899999999999999995 4679999999997642 222 333445555678889999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 576 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~ 576 (771)
||+++ +|.+++.........+++..++.++.|++.||+|||++. +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 99974 888887543334467999999999999999999999863 799999999999999999999999999986654
Q ss_pred CCcccccccccCCCccchhhh----ccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHH
Q 004155 577 DNTHISTRVAGTFGYMAPEYA----MRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMEL 652 (771)
Q Consensus 577 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (771)
... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||........ .. ...
T Consensus 163 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~-------------~~~ 226 (290)
T 3fme_A 163 DVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ-QL-------------KQV 226 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH-HH-------------HHH
T ss_pred ccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH-HH-------------HHH
Confidence 322 2234689999999996 566789999999999999999999999975322111 00 111
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 653 VDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 653 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
+...............+.+++.+||+.||++|||+.|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 227 VEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred hccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1111111111123446889999999999999999999976
No 171
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=342.31 Aligned_cols=249 Identities=25% Similarity=0.383 Sum_probs=183.6
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 495 (771)
.++|.+.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35788999999999999999954 679999999986532 12346789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|||+++++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EECCTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 9999999999999543 24689999999999999999999998 89999999999999999999999999998665
Q ss_pred CCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 576 EDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 576 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
..... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||.......... .+...
T Consensus 164 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---------------~~~~~ 227 (278)
T 3cok_A 164 MPHEK-HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN---------------KVVLA 227 (278)
T ss_dssp -----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------------CCSS
T ss_pred CCCCc-ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH---------------HHhhc
Confidence 33221 223568999999999998899999999999999999999999997644322110 00000
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.. ..+......+.+++.+||+.||++||++.++++
T Consensus 228 ~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 228 DY--EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cc--CCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 00 111222346789999999999999999999986
No 172
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4.2e-39 Score=340.94 Aligned_cols=248 Identities=27% Similarity=0.403 Sum_probs=196.6
Q ss_pred CCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEe----CCEEEE
Q 004155 422 NFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIE----GNQLLL 494 (771)
Q Consensus 422 ~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 494 (771)
.|.+.+.||+|+||.||+|. ..++..||+|++... .....+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 46777899999999999994 456889999998653 34456788999999999999999999999875 456899
Q ss_pred EEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEc-CCCCeEEEeecCccc
Q 004155 495 IYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLD-KDLNPKISDFGLAKL 573 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DFGla~~ 573 (771)
||||+++|+|.+++. ....+++..++.++.||+.||+|||+.+ .+|+||||||+||+++ .++.+||+|||++..
T Consensus 107 v~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 107 VTELMTSGTLKTYLK----RFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEecCCCCHHHHHH----HccCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 999999999999993 2356899999999999999999999981 1399999999999997 889999999999975
Q ss_pred cCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHh
Q 004155 574 DEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELV 653 (771)
Q Consensus 574 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (771)
..... .....||+.|+|||++. +.++.++|||||||++|+|++|+.||......... . ... ..+.....
T Consensus 182 ~~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~---~~~-~~~~~~~~- 250 (290)
T 1t4h_A 182 KRASF---AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI--Y---RRV-TSGVKPAS- 250 (290)
T ss_dssp CCTTS---BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH--H---HHH-TTTCCCGG-
T ss_pred ccccc---cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHH--H---HHH-hccCCccc-
Confidence 54332 23456899999999876 45899999999999999999999999753322111 1 001 11100000
Q ss_pred hhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 654 DKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 654 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.+......+.+++.+||+.||++||++.|+++
T Consensus 251 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 251 -------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -------cCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 11112245889999999999999999999986
No 173
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.5e-39 Score=352.96 Aligned_cols=252 Identities=21% Similarity=0.340 Sum_probs=199.8
Q ss_pred HhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeCCEEEEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISAL-QHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 496 (771)
..++|++.+.||+|+||.||+|. ..+|+.||||++..... ...+|++++.++ +||||+++++++.+.+..++||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 45679999999999999999995 45789999999976433 235688888887 7999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCC----CCeEEEeecCcc
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKD----LNPKISDFGLAK 572 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~DFGla~ 572 (771)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||+.++ +.+||+|||+++
T Consensus 96 E~~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 96 ELMKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp CCCCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred eCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 99999999999943 34689999999999999999999998 89999999999998433 359999999998
Q ss_pred ccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHH
Q 004155 573 LDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMEL 652 (771)
Q Consensus 573 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (771)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..........+.... ..+..
T Consensus 169 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i----~~~~~--- 240 (342)
T 2qr7_A 169 QLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARI----GSGKF--- 240 (342)
T ss_dssp ECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHH----HHCCC---
T ss_pred cCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHH----ccCCc---
Confidence 7654332 223457899999999998888899999999999999999999999754332222221111 01110
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 653 VDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 653 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.+...........+.+++.+||+.||++||++.|+++
T Consensus 241 ---~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 241 ---SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp ---CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ---ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0111111223346789999999999999999999986
No 174
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2e-39 Score=349.76 Aligned_cols=262 Identities=27% Similarity=0.380 Sum_probs=205.7
Q ss_pred hcCCCCCCccccCCceeEEEEEc------CCCcEEEEEEcccC-ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM------ADGTVVAVKQLSSK-SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQL 492 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 492 (771)
.++|.+.+.||+|+||.||+|.. .+++.||||++... .......+.+|+.++++++||||+++++++.+.+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46788899999999999999963 35778999999754 344567899999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhcCCCc---cCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcC---CCCeEEE
Q 004155 493 LLIYEYMENNSLARALFGPEA---HRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDK---DLNPKIS 566 (771)
Q Consensus 493 ~lV~E~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 566 (771)
++||||+++|+|.+++..... ....+++..++.++.||+.||+|||+. +|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999964432 224589999999999999999999998 8999999999999984 4569999
Q ss_pred eecCccccCCCCc-ccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHH
Q 004155 567 DFGLAKLDEEDNT-HISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILK 644 (771)
Q Consensus 567 DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 644 (771)
|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||+| |+.||......+.. ..
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~---~~----- 257 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL---EF----- 257 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH---HH-----
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHH---HH-----
Confidence 9999975433221 12233467899999999999999999999999999999998 99999754332211 10
Q ss_pred hhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 645 AQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 645 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
+........+......+.+++.+||+.||.+||++.|+++.|+.....
T Consensus 258 --------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 258 --------VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp --------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --------HhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 111111112222345688999999999999999999999999876543
No 175
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.9e-39 Score=369.85 Aligned_cols=253 Identities=26% Similarity=0.334 Sum_probs=206.4
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 495 (771)
.++|...++||+|+||.||+|.. .+|+.||||++.... ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 46789999999999999999954 579999999986532 23456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|||+++|+|.+++.... ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 263 mEy~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp ECCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 99999999999995432 24599999999999999999999998 89999999999999999999999999998765
Q ss_pred CCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 576 EDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 576 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...........+. ..+..
T Consensus 338 ~~~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~------------~~i~~ 403 (576)
T 2acx_A 338 EGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE------------RLVKE 403 (576)
T ss_dssp TTCC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHH------------HHHHH
T ss_pred cCcc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHH------------HHhhc
Confidence 4332 233579999999999999899999999999999999999999997644322111110 00000
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRP-----SMSSVVS 692 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~ 692 (771)
....++......+.+++.+||+.||++|| ++.|+++
T Consensus 404 -~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 404 -VPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp -CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred -ccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 01122222334688999999999999999 7788875
No 176
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=3e-39 Score=344.57 Aligned_cols=255 Identities=22% Similarity=0.362 Sum_probs=204.2
Q ss_pred HhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 497 (771)
..++|.+.+.||+|+||.||+|.. .+|+.||+|++..........+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 346788999999999999999954 5789999999986555455678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEE---cCCCCeEEEeecCcccc
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLAKLD 574 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DFGla~~~ 574 (771)
|+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++..
T Consensus 87 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 87 LVSGGELFDRILE----RGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp CCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred cCCCccHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 9999999999832 34689999999999999999999998 89999999999999 78899999999999764
Q ss_pred CCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhh
Q 004155 575 EEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVD 654 (771)
Q Consensus 575 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 654 (771)
.... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||.......... ... .+..
T Consensus 160 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~------~i~-~~~~----- 224 (304)
T 2jam_A 160 QNGI---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFE------KIK-EGYY----- 224 (304)
T ss_dssp CCBT---THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH------HHH-HCCC-----
T ss_pred CCCc---cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHH------HHH-cCCC-----
Confidence 4321 233468999999999999999999999999999999999999997543322111 000 1100
Q ss_pred hhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HhcC
Q 004155 655 KRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS--MLEG 696 (771)
Q Consensus 655 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~ 696 (771)
.............+.+++.+||+.||++||++.|+++ .+++
T Consensus 225 -~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 267 (304)
T 2jam_A 225 -EFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDG 267 (304)
T ss_dssp -CCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHS
T ss_pred -CCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccC
Confidence 0001111123356889999999999999999999986 4554
No 177
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=6.1e-39 Score=346.63 Aligned_cols=265 Identities=23% Similarity=0.360 Sum_probs=199.2
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC--hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 35788899999999999999954 458999999986543 233566889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 576 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~ 576 (771)
||+++++|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 104 e~~~~~~l~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 104 EFVDHTILDDLELF----PNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp ECCSEEHHHHHHHS----TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecCCcchHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 99999999988732 34699999999999999999999998 899999999999999999999999999986544
Q ss_pred CCcccccccccCCCccchhhhccC-CCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHH--------HHHHhhC
Q 004155 577 DNTHISTRVAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWA--------LILKAQG 647 (771)
Q Consensus 577 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~--------~~~~~~~ 647 (771)
... ......||..|+|||++.+. .++.++|||||||++|||++|+.||......+........ .......
T Consensus 177 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
T 4aaa_A 177 PGE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN 255 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHC
T ss_pred Ccc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhc
Confidence 322 22335689999999999875 7899999999999999999999999765433221111000 0000000
Q ss_pred -ChhHHhhhhcCCCCCH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 648 -NLMELVDKRLGSNFDK-----EQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 648 -~~~~~~d~~l~~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.......+.+...... .....+.+++.+||+.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000001111111 12356889999999999999999999886
No 178
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.6e-39 Score=378.48 Aligned_cols=247 Identities=27% Similarity=0.384 Sum_probs=198.7
Q ss_pred CccccCCceeEEEEEc---CCCcEEEEEEcccCC--hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEEeccC
Q 004155 427 NKIGEGGFGPVYKGHM---ADGTVVAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYEYMEN 501 (771)
Q Consensus 427 ~~lG~G~~g~Vy~~~~---~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 501 (771)
++||+|+||.||+|.+ ..++.||||+++... ....+++.+|+.++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999999944 346789999997643 3346789999999999999999999999964 568999999999
Q ss_pred CCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCCcc-
Q 004155 502 NSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTH- 580 (771)
Q Consensus 502 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~~~- 580 (771)
|+|.+++. ....+++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 454 g~L~~~l~----~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQ----QNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHH----HCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHh----hCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 99999994 335689999999999999999999998 8999999999999999999999999999876543322
Q ss_pred -cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhcC
Q 004155 581 -ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRLG 658 (771)
Q Consensus 581 -~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 658 (771)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+.. +.+.....
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~----------------~~i~~~~~ 590 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT----------------AMLEKGER 590 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH----------------HHHHTTCC
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH----------------HHHHcCCC
Confidence 2233456789999999999999999999999999999998 99999765433221 11111111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 659 SNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 659 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
...+......+.+++..||+.||++||++.+|+++|+..
T Consensus 591 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 591 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 222333446688999999999999999999999999863
No 179
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=4.3e-39 Score=356.90 Aligned_cols=250 Identities=20% Similarity=0.228 Sum_probs=189.8
Q ss_pred cCCCCC-CccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHH-cCCCCcEEeEEEEEEe----CCEEE
Q 004155 421 NNFAPD-NKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMIS-ALQHPNLVKLHGCCIE----GNQLL 493 (771)
Q Consensus 421 ~~f~~~-~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~----~~~~~ 493 (771)
++|.+. ++||+|+||.||+|. ..+|+.||||++... ..+.+|++++. ..+||||+++++++.. .+..|
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456665 689999999999994 457899999998642 35678888874 4589999999999875 56789
Q ss_pred EEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcC---CCCeEEEeecC
Q 004155 494 LIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDK---DLNPKISDFGL 570 (771)
Q Consensus 494 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DFGl 570 (771)
+||||+++|+|.+++.... ...+++..+..|+.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+
T Consensus 136 lv~E~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~ 210 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF 210 (400)
T ss_dssp EEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEEeCCCCcHHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEeccc
Confidence 9999999999999996532 24699999999999999999999998 8999999999999987 78999999999
Q ss_pred ccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhh-HHHHHHHHHhhCCh
Q 004155 571 AKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFY-LLDWALILKAQGNL 649 (771)
Q Consensus 571 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~-~~~~~~~~~~~~~~ 649 (771)
++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ...... .+..
T Consensus 211 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~----~~~~ 284 (400)
T 1nxk_A 211 AKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR----MGQY 284 (400)
T ss_dssp CEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH----HTCC
T ss_pred ccccCCCCc--cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH----cCcc
Confidence 986543322 234578999999999999999999999999999999999999997644322110 000000 0000
Q ss_pred hHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 650 MELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 650 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.............+.+++.+||+.||++|||+.|+++
T Consensus 285 ------~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 285 ------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp ------CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ------cCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000000122345889999999999999999999997
No 180
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.6e-40 Score=357.93 Aligned_cols=266 Identities=14% Similarity=0.141 Sum_probs=205.1
Q ss_pred hcCCCCCCccccCCceeEEEEEcC---------CCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEe---------
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMA---------DGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVK--------- 481 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~---------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~--------- 481 (771)
.++|.+.+.||+|+||.||+|... +++.||||++... ..+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 367889999999999999999654 3789999998754 35788999999999999887
Q ss_pred ------EEEEEEe-CCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCc
Q 004155 482 ------LHGCCIE-GNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATN 554 (771)
Q Consensus 482 ------l~~~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~N 554 (771)
+++++.. ++..++||||+ +++|.+++.... ...+++..++.|+.||+.||+|||+. +|+||||||+|
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~N 189 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAEN 189 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGG
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHH
Confidence 6788876 78899999999 999999995331 25799999999999999999999998 89999999999
Q ss_pred EEEcCCC--CeEEEeecCccccCCCCcc------cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCC
Q 004155 555 VLLDKDL--NPKISDFGLAKLDEEDNTH------ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSS 626 (771)
Q Consensus 555 Ill~~~~--~~kl~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~ 626 (771)
||++.++ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999998 9999999999866543221 1133479999999999999999999999999999999999999997
Q ss_pred CCCccchhhHHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCCCC
Q 004155 627 CKPKEDIFYLLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADVQD 702 (771)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 702 (771)
....... ............ ...+.+.... .......+.+++.+||+.||++||++.+++++|+++.....
T Consensus 270 ~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 270 NCLPNTE-DIMKQKQKFVDK--PGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp GGTTCHH-HHHHHHHHHHHS--CCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred cCCcCHH-HHHHHHHhccCC--hhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 5432211 111111111100 0001110000 00123458899999999999999999999999988654443
No 181
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.4e-39 Score=348.39 Aligned_cols=248 Identities=24% Similarity=0.382 Sum_probs=204.5
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccC---ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSK---SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 495 (771)
.++|.+.+.||+|+||.||++.. .+++.||+|++... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 35688899999999999999954 46889999998654 234467789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|||+++++|.+++. ....+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~e~~~~~~L~~~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 120 LELCRRRSLLELHK----RRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp ECCCTTCBHHHHHH----HHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 99999999999983 235789999999999999999999998 89999999999999999999999999998765
Q ss_pred CCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 576 EDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 576 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
..... .....||..|+|||++.+..++.++|||||||++|||++|+.||......+... ... ..
T Consensus 193 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~------~~~---------~~ 256 (335)
T 2owb_A 193 YDGER-KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL------RIK---------KN 256 (335)
T ss_dssp STTCC-BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------HHH---------HT
T ss_pred cCccc-ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHH------HHh---------cC
Confidence 33222 234569999999999999999999999999999999999999997543222110 000 00
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.. ..+......+.+++.+||+.||++||++.|+++
T Consensus 257 ~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 257 EY--SIPKHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp CC--CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CC--CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00 111122345788999999999999999999986
No 182
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.2e-40 Score=354.41 Aligned_cols=262 Identities=24% Similarity=0.314 Sum_probs=192.2
Q ss_pred HhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCC-CCcEEeEEEEEEe--------
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISALQ-HPNLVKLHGCCIE-------- 488 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~-------- 488 (771)
...+|++.++||+|+||.||+|. ..+|+.||||++........+.+.+|+.++.++. ||||+++++++..
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 34578899999999999999995 4578999999997766666788999999999996 9999999999953
Q ss_pred CCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCc--eeccCCCCCcEEEcCCCCeEEE
Q 004155 489 GNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLK--IVHRDIKATNVLLDKDLNPKIS 566 (771)
Q Consensus 489 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~ 566 (771)
....++||||+. |+|.+++.... ....+++..++.|+.||+.||+|||+. + |+||||||+|||++.++.+||+
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~ 180 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLC 180 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBC
T ss_pred CceEEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEe
Confidence 345899999996 69999884321 234699999999999999999999998 6 9999999999999999999999
Q ss_pred eecCccccCCCCccc-----------ccccccCCCccchhhh---ccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccc
Q 004155 567 DFGLAKLDEEDNTHI-----------STRVAGTFGYMAPEYA---MRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKED 632 (771)
Q Consensus 567 DFGla~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~ 632 (771)
|||+++......... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||.......
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~ 260 (337)
T 3ll6_A 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR 260 (337)
T ss_dssp CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH
Confidence 999998765432211 1134589999999998 56678999999999999999999999996432211
Q ss_pred hhhHHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCCCCCC
Q 004155 633 IFYLLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADVQDFV 704 (771)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 704 (771)
++...............+.+++.+||+.||++||++.|+++.|+.+.......
T Consensus 261 -------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~ 313 (337)
T 3ll6_A 261 -------------------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313 (337)
T ss_dssp ------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCC
T ss_pred -------------------hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCC
Confidence 11111111111112234778999999999999999999999998875544333
No 183
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=6.5e-39 Score=357.78 Aligned_cols=249 Identities=23% Similarity=0.340 Sum_probs=191.6
Q ss_pred HHhcCCCCCCccccCCceeEEEE-EcCCCcEEEEEEcccCC--------hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEe
Q 004155 418 AATNNFAPDNKIGEGGFGPVYKG-HMADGTVVAVKQLSSKS--------KQGNREFVNEIGMISALQHPNLVKLHGCCIE 488 (771)
Q Consensus 418 ~~~~~f~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 488 (771)
...++|.+.++||+|+||.||+| ...+++.||||++.... ......+.+|+.++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 45688999999999999999999 45668999999986532 112235889999999999999999999975
Q ss_pred CCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCC---CCeEE
Q 004155 489 GNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKD---LNPKI 565 (771)
Q Consensus 489 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl 565 (771)
.+..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.+ +.+||
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred cCceEEEEEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEE
Confidence 4568999999999999998843 35799999999999999999999998 89999999999999654 45999
Q ss_pred EeecCccccCCCCcccccccccCCCccchhhhcc---CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHH
Q 004155 566 SDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMR---GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALI 642 (771)
Q Consensus 566 ~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~ 642 (771)
+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... .
T Consensus 284 ~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~--~----- 354 (419)
T 3i6u_A 284 TDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL--K----- 354 (419)
T ss_dssp CCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCH--H-----
T ss_pred eecccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHH--H-----
Confidence 9999998765432 2234679999999999853 67889999999999999999999999754332211 0
Q ss_pred HHhhCChhHHhhhhcCCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 643 LKAQGNLMELVDKRLGSNFDK----EQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 643 ~~~~~~~~~~~d~~l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
+.+.... ..... .....+.+++.+||+.||++||++.|+++
T Consensus 355 --------~~i~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 355 --------DQITSGK-YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp --------HHHHTTC-CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --------HHHhcCC-CCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 0011000 01111 12346889999999999999999999987
No 184
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=5.2e-39 Score=339.16 Aligned_cols=245 Identities=22% Similarity=0.355 Sum_probs=202.9
Q ss_pred cCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
++|.+.+.||+|+||.||+|.. .+++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 5788899999999999999954 468899999986532 223567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 576 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~ 576 (771)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 94 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 94 EFAPRGELYKELQK----HGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp CCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 99999999999942 34689999999999999999999998 899999999999999999999999999976543
Q ss_pred CCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhh
Q 004155 577 DNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKR 656 (771)
Q Consensus 577 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 656 (771)
.. .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+... .+....
T Consensus 167 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---------------~~~~~~ 228 (284)
T 2vgo_A 167 LR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR---------------RIVNVD 228 (284)
T ss_dssp SC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH---------------HHHTTC
T ss_pred cc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHH---------------HHhccc
Confidence 22 233568999999999999999999999999999999999999997543222110 111111
Q ss_pred cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 657 LGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 657 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
..++......+.+++.+|++.||.+||++.|+++
T Consensus 229 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 229 --LKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp --CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --cCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 1122223346789999999999999999999986
No 185
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.6e-38 Score=342.83 Aligned_cols=255 Identities=18% Similarity=0.273 Sum_probs=200.4
Q ss_pred cCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCC-CCcEEeEEEEEEe--CCEEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISALQ-HPNLVKLHGCCIE--GNQLLLIY 496 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lV~ 496 (771)
++|++.++||+|+||.||+|. ..+++.||||+++.. ..+.+.+|+.++++++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 678899999999999999994 567899999998753 3467899999999997 9999999999987 67889999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCC-CeEEEeecCccccC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL-NPKISDFGLAKLDE 575 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~DFGla~~~~ 575 (771)
||+++++|.+++ ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++ .+||+|||+++...
T Consensus 113 e~~~~~~l~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 113 EHVNNTDFKQLY-------QTLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp ECCCCCCHHHHG-------GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eccCchhHHHHH-------HhCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 999999999998 2489999999999999999999998 899999999999999776 89999999998765
Q ss_pred CCCcccccccccCCCccchhhhcc-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhh
Q 004155 576 EDNTHISTRVAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVD 654 (771)
Q Consensus 576 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 654 (771)
.... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||....... ..+...... .......+.++
T Consensus 183 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~-~~l~~~~~~-~~~~~~~~~~~ 258 (330)
T 3nsz_A 183 PGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY-DQLVRIAKV-LGTEDLYDYID 258 (330)
T ss_dssp TTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH-HHHHHHHHH-HCHHHHHHHHH
T ss_pred CCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchH-HHHHHHHHh-cCCchhhhHHH
Confidence 4332 233568999999999987 678999999999999999999999996533221 111111111 11111111111
Q ss_pred hh-----------------------cCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 655 KR-----------------------LGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 655 ~~-----------------------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.. ............+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 10 000111113456889999999999999999999987
No 186
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.6e-39 Score=350.73 Aligned_cols=267 Identities=24% Similarity=0.300 Sum_probs=197.6
Q ss_pred HHHhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCChh-----cHHHHHHHHHHHHcCCCCcEEeEEEEEEeCC
Q 004155 417 KAATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSKQ-----GNREFVNEIGMISALQHPNLVKLHGCCIEGN 490 (771)
Q Consensus 417 ~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 490 (771)
....++|.+.+.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+.++++++||||+++++++.+.+
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 34567899999999999999999965 46899999998753221 1246889999999999999999999999999
Q ss_pred EEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecC
Q 004155 491 QLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 570 (771)
Q Consensus 491 ~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGl 570 (771)
..++||||+++ +|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGL 158 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGG
T ss_pred ceEEEEEcCCC-CHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEeccc
Confidence 99999999986 899988432 34689999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCcccccccccCCCccchhhhccC-CCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhh--C
Q 004155 571 AKLDEEDNTHISTRVAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQ--G 647 (771)
Q Consensus 571 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--~ 647 (771)
++....... ......||+.|+|||++.+. .++.++|||||||++|||++|.+||......+... ......... .
T Consensus 159 a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~--~i~~~~~~~~~~ 235 (346)
T 1ua2_A 159 AKSFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLT--RIFETLGTPTEE 235 (346)
T ss_dssp GSTTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHHHCCCCTT
T ss_pred ceeccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHH--HHHHHcCCCChh
Confidence 987654332 22345689999999999764 58999999999999999999999987654322211 111100000 0
Q ss_pred ChhH---Hhhhhc---CCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 004155 648 NLME---LVDKRL---GSNFD-----KEQVMVMINVALLCTDVSSTSRPSMSSVVSM 693 (771)
Q Consensus 648 ~~~~---~~d~~l---~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 693 (771)
.... ..+... ....+ ......+.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000 000000 00001 1123568899999999999999999999973
No 187
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=6.1e-39 Score=349.51 Aligned_cols=266 Identities=23% Similarity=0.320 Sum_probs=200.6
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCCh--hcHHHHHHHHHHHHcCCCCcEEeEEEEEEe--------
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSK--QGNREFVNEIGMISALQHPNLVKLHGCCIE-------- 488 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 488 (771)
.++|++.++||+|+||.||+|.. .+|+.||||++..... .....+.+|+.++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36788999999999999999954 6799999999865432 234578899999999999999999999987
Q ss_pred CCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEee
Q 004155 489 GNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDF 568 (771)
Q Consensus 489 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DF 568 (771)
.+..++||||+++ +|.+.+... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CceEEEEEeccCC-CHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccc
Confidence 4568999999985 777777433 24699999999999999999999998 8999999999999999999999999
Q ss_pred cCccccCCCC---cccccccccCCCccchhhhcc-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHH
Q 004155 569 GLAKLDEEDN---THISTRVAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILK 644 (771)
Q Consensus 569 Gla~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~ 644 (771)
|+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|++||...................
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~ 248 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSI 248 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 9998664322 122234568999999999876 468999999999999999999999998654433222111110000
Q ss_pred hhCChhHHhhhhc--------CCCCC-HHH------HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 645 AQGNLMELVDKRL--------GSNFD-KEQ------VMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 645 ~~~~~~~~~d~~l--------~~~~~-~~~------~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
........-.... ..... .+. ...+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 249 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0000000000000 00000 111 234789999999999999999999987
No 188
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1e-38 Score=335.15 Aligned_cols=247 Identities=22% Similarity=0.372 Sum_probs=194.8
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 495 (771)
.++|.+.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 36788999999999999999965 479999999986532 23356789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|||+++++|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 90 MEYVSGGELFDYICK----HGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp EECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred EeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccC
Confidence 999999999999932 34689999999999999999999998 89999999999999999999999999998665
Q ss_pred CCCcccccccccCCCccchhhhccCCC-CchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhh
Q 004155 576 EDNTHISTRVAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVD 654 (771)
Q Consensus 576 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 654 (771)
.... .....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||......... . ... .+
T Consensus 163 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~---~---~~~-~~------- 226 (276)
T 2h6d_A 163 DGEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLF---K---KIR-GG------- 226 (276)
T ss_dssp C---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---H---HHH-HC-------
T ss_pred CCcc--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH---H---Hhh-cC-------
Confidence 4322 233468999999999987765 68999999999999999999999754322111 1 000 00
Q ss_pred hhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 655 KRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 655 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
. ...+......+.+++.+||+.||++||++.|+++
T Consensus 227 -~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 227 -V--FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp -C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -c--ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 0 0111122345788999999999999999999997
No 189
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.1e-38 Score=347.26 Aligned_cols=259 Identities=20% Similarity=0.343 Sum_probs=206.3
Q ss_pred CHHHHHHHhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCCh--------hcHHHHHHHHHHHHcC-CCCcEEe
Q 004155 412 TLRQIKAATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSK--------QGNREFVNEIGMISAL-QHPNLVK 481 (771)
Q Consensus 412 ~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~ 481 (771)
.........++|.+.+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|+.+++++ +||||++
T Consensus 85 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 164 (365)
T 2y7j_A 85 DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164 (365)
T ss_dssp HHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred cchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3444556678899999999999999999965 4799999999865431 1245678999999999 7999999
Q ss_pred EEEEEEeCCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCC
Q 004155 482 LHGCCIEGNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL 561 (771)
Q Consensus 482 l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~ 561 (771)
+++++......++||||+++++|.+++. ....+++..+..++.||+.||.|||+. +|+||||||+||+++.++
T Consensus 165 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~----~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~ 237 (365)
T 2y7j_A 165 LIDSYESSSFMFLVFDLMRKGELFDYLT----EKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNM 237 (365)
T ss_dssp EEEEEEBSSEEEEEECCCTTCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTC
T ss_pred EEEEEeeCCEEEEEEEeCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCC
Confidence 9999999999999999999999999994 235799999999999999999999998 899999999999999999
Q ss_pred CeEEEeecCccccCCCCcccccccccCCCccchhhhcc------CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhh
Q 004155 562 NPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMR------GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFY 635 (771)
Q Consensus 562 ~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~ 635 (771)
.+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 238 ~ikl~DfG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~- 314 (365)
T 2y7j_A 238 QIRLSDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILML- 314 (365)
T ss_dssp CEEECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-
T ss_pred CEEEEecCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHH-
Confidence 999999999987654322 234579999999999863 35889999999999999999999999754322111
Q ss_pred HHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 636 LLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.. .. .+... ...+.. .. ....+.+++.+||+.||++||++.|+++
T Consensus 315 --~~---i~-~~~~~-~~~~~~-~~----~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 315 --RM---IM-EGQYQ-FSSPEW-DD----RSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp --HH---HH-HTCCC-CCHHHH-SS----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --HH---HH-hCCCC-CCCccc-cc----CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 10 00 00000 000000 01 1245889999999999999999999986
No 190
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.8e-38 Score=358.62 Aligned_cols=194 Identities=25% Similarity=0.404 Sum_probs=154.4
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeC-----CE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIEG-----NQ 491 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 491 (771)
.++|++.++||+|+||.||+|. ..+|+.||||++... .....+.+.+|+.+|++++||||+++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 4689999999999999999994 457899999998653 334457889999999999999999999998533 57
Q ss_pred EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCc
Q 004155 492 LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 571 (771)
Q Consensus 492 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla 571 (771)
.|+||||+. ++|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|
T Consensus 132 ~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRT----PVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEEECCCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeccc-cchhhhccc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 999999984 699999843 35699999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCc--------------------------ccccccccCCCccchhhh-ccCCCCchHhHHHHHHHHHHHHhC
Q 004155 572 KLDEEDNT--------------------------HISTRVAGTFGYMAPEYA-MRGYLTDKADVYSFGIVALEIVSG 621 (771)
Q Consensus 572 ~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~ksDV~S~Gvil~elltG 621 (771)
+....... ...+...||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 87643211 112345789999999986 466799999999999999999993
No 191
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=348.37 Aligned_cols=270 Identities=26% Similarity=0.371 Sum_probs=197.4
Q ss_pred hcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHH--HHcCCCCcEEeEEEEEEe-----CCEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGM--ISALQHPNLVKLHGCCIE-----GNQL 492 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~-----~~~~ 492 (771)
.++|++.+.||+|+||.||+|.. +++.||||++.... ...+..|.++ +..++||||+++++++.. ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 36788999999999999999976 68999999986532 3344555555 445899999999987653 2367
Q ss_pred EEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcC------CCceeccCCCCCcEEEcCCCCeEEE
Q 004155 493 LLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEES------RLKIVHRDIKATNVLLDKDLNPKIS 566 (771)
Q Consensus 493 ~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~------~~~ivH~Dlkp~NIll~~~~~~kl~ 566 (771)
++||||+++|+|.+++. ....++..++.++.||+.||+|||+.. .++|+||||||+|||++.++.+||+
T Consensus 88 ~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLS-----LHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEECCCTTCBHHHHHH-----HCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCcHHHHHh-----hcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 99999999999999993 234589999999999999999999872 2379999999999999999999999
Q ss_pred eecCccccCCCCc-------ccccccccCCCccchhhhcc-------CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccc
Q 004155 567 DFGLAKLDEEDNT-------HISTRVAGTFGYMAPEYAMR-------GYLTDKADVYSFGIVALEIVSGRSNSSCKPKED 632 (771)
Q Consensus 567 DFGla~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~ 632 (771)
|||+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 9999987653221 11223569999999999976 456779999999999999999987765432211
Q ss_pred hhhHHHHHHHHHhhCChh---HHh-hhhcCCC------CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCC
Q 004155 633 IFYLLDWALILKAQGNLM---ELV-DKRLGSN------FDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRAD 699 (771)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~---~~~-d~~l~~~------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 699 (771)
..... +........... ..+ ....... ........+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 243 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~ 318 (336)
T 3g2f_A 243 EYQMA-FQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMM 318 (336)
T ss_dssp CCCCT-THHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHh-hhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence 10000 000000000000 000 0111111 122456679999999999999999999999999988653
No 192
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.4e-39 Score=351.09 Aligned_cols=255 Identities=22% Similarity=0.334 Sum_probs=199.5
Q ss_pred HhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCC-hhcHHHHHHHHHH-HHcCCCCcEEeEEEEEEeCCEEEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKS-KQGNREFVNEIGM-ISALQHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lV 495 (771)
..++|++.+.||+|+||.||+|. ..+|+.||||++.... .....++..|..+ ++.++||||+++++++.+.+..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 44678889999999999999995 4679999999997642 2334556666665 7778999999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|||+++ +|.+++.........+++..++.++.||+.||+|||++. +|+||||||+|||++.++.+||+|||+++...
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 999975 999988543233467999999999999999999999752 79999999999999999999999999998664
Q ss_pred CCCcccccccccCCCccchhhhc----cCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhH
Q 004155 576 EDNTHISTRVAGTFGYMAPEYAM----RGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLME 651 (771)
Q Consensus 576 ~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (771)
... ......||+.|+|||++. ...++.++|||||||++|||++|+.||........ .. ..
T Consensus 206 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~--~~------------~~ 269 (340)
T 3an0_A 206 DSV--AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ--QL------------KQ 269 (340)
T ss_dssp CHH--HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH--HH------------HH
T ss_pred ccc--ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHH--HH------------HH
Confidence 322 123346999999999974 34789999999999999999999999975322111 00 11
Q ss_pred HhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 652 LVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 652 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.+...............+.+++.+||+.||++||++.|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 270 VVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp HHHSCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HhcCCCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 11111111111123456889999999999999999999986
No 193
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=4.7e-39 Score=352.40 Aligned_cols=252 Identities=14% Similarity=0.133 Sum_probs=202.2
Q ss_pred HhcCCCCCCccccCCceeEEEE------EcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCC---CCcEEeEEEEEEeC
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKG------HMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQ---HPNLVKLHGCCIEG 489 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~------~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 489 (771)
..++|.+.++||+|+||.||+| ...+++.||||+++... ..++..|++++.+++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 4577889999999999999999 35568999999997643 456788888888886 99999999999999
Q ss_pred CEEEEEEEeccCCCHHHHhcCCCc-cCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcC---------
Q 004155 490 NQLLLIYEYMENNSLARALFGPEA-HRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDK--------- 559 (771)
Q Consensus 490 ~~~~lV~E~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~--------- 559 (771)
+..++||||+++|+|.+++..... ....+++..++.|+.||+.||+|||+. +|+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999953211 235699999999999999999999998 8999999999999998
Q ss_pred --CCCeEEEeecCccccCCC-CcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhH
Q 004155 560 --DLNPKISDFGLAKLDEED-NTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYL 636 (771)
Q Consensus 560 --~~~~kl~DFGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~ 636 (771)
++.+||+|||+|+..... .........||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--- 293 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC--- 293 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE---
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce---
Confidence 899999999999755322 22233456799999999999999999999999999999999999999853221110
Q ss_pred HHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHhcCC
Q 004155 637 LDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSR-PSMSSVVSMLEGR 697 (771)
Q Consensus 637 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Ps~~evl~~L~~~ 697 (771)
.++..+.... ....+.+++..|++.+|.+| |++.++.+.|+..
T Consensus 294 ---------------~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~ 337 (365)
T 3e7e_A 294 ---------------KPEGLFRRLP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337 (365)
T ss_dssp ---------------EECSCCTTCS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred ---------------eechhccccC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence 0111111111 13356678889999999988 5788888888764
No 194
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.9e-39 Score=343.40 Aligned_cols=257 Identities=24% Similarity=0.383 Sum_probs=197.3
Q ss_pred hcCCCCCCccccCCceeEEEEEc--CCCc--EEEEEEcccC---ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM--ADGT--VVAVKQLSSK---SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQL 492 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~--~~g~--~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 492 (771)
.++|++.+.||+|+||.||+|.. .+++ .||||+++.. .....+.+.+|+.++++++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 35788899999999999999964 2333 6999998754 2344678899999999999999999999998765 8
Q ss_pred EEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCcc
Q 004155 493 LLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 572 (771)
Q Consensus 493 ~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~ 572 (771)
++||||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccc
Confidence 8999999999999999432 24689999999999999999999998 89999999999999999999999999998
Q ss_pred ccCCCCcc--cccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCCh
Q 004155 573 LDEEDNTH--ISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNL 649 (771)
Q Consensus 573 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (771)
........ ......+|..|+|||++.+..++.++||||||+++|||++ |+.||......+... ...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~------~~~----- 238 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH------KID----- 238 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH------HHH-----
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHH------HHH-----
Confidence 76544322 1233457889999999998889999999999999999999 999997544322111 111
Q ss_pred hHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCC
Q 004155 650 MELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRA 698 (771)
Q Consensus 650 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 698 (771)
...............+.+++.+||+.||++||++.++++.|++..
T Consensus 239 ----~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 283 (291)
T 1u46_A 239 ----KEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283 (291)
T ss_dssp ----TSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred ----ccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence 110111112233456889999999999999999999999998754
No 195
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.7e-39 Score=353.11 Aligned_cols=263 Identities=21% Similarity=0.281 Sum_probs=197.5
Q ss_pred HHHhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEe-------
Q 004155 417 KAATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIE------- 488 (771)
Q Consensus 417 ~~~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------- 488 (771)
+...++|.+.+.||+|+||.||+|. ..+|+.||||++...... ..+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 4567789999999999999999994 567999999998654322 3469999999999999999999854
Q ss_pred -------------------------------CCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHh
Q 004155 489 -------------------------------GNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYL 537 (771)
Q Consensus 489 -------------------------------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~L 537 (771)
....++||||++ |+|.+.+.........+++..+..++.||+.||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 334899999998 488887754333446799999999999999999999
Q ss_pred hhcCCCceeccCCCCCcEEEc-CCCCeEEEeecCccccCCCCcccccccccCCCccchhhhccC-CCCchHhHHHHHHHH
Q 004155 538 HEESRLKIVHRDIKATNVLLD-KDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRG-YLTDKADVYSFGIVA 615 (771)
Q Consensus 538 H~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~S~Gvil 615 (771)
|+. +|+||||||+||+++ .++.+||+|||+|+........ ....||..|+|||.+.+. .++.++||||+||++
T Consensus 158 H~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 158 HSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPS--VAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp HTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCC--CCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCC--cCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 998 899999999999998 6889999999999876543322 345689999999998765 589999999999999
Q ss_pred HHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhh--h--------hcCCC-----CCHHHHHHHHHHHHHccCCC
Q 004155 616 LEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVD--K--------RLGSN-----FDKEQVMVMINVALLCTDVS 680 (771)
Q Consensus 616 ~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~--------~l~~~-----~~~~~~~~l~~l~~~Cl~~d 680 (771)
|||++|+.||......+.. ...... ........+.. + ..... ++......+.+++.+||+.|
T Consensus 233 ~ell~g~~pf~~~~~~~~~--~~i~~~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 309 (383)
T 3eb0_A 233 GELILGKPLFSGETSIDQL--VRIIQI-MGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYE 309 (383)
T ss_dssp HHHHHSSCSSCCSSHHHHH--HHHHHH-HCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred HHHHhCCCCCCCCChHHHH--HHHHHH-hCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCC
Confidence 9999999999765433221 111111 11111111100 0 00000 11112345889999999999
Q ss_pred CCCCCCHHHHHH
Q 004155 681 STSRPSMSSVVS 692 (771)
Q Consensus 681 P~~RPs~~evl~ 692 (771)
|++|||+.|+++
T Consensus 310 P~~R~t~~e~l~ 321 (383)
T 3eb0_A 310 PDLRINPYEAMA 321 (383)
T ss_dssp GGGSCCHHHHHT
T ss_pred hhhCCCHHHHhc
Confidence 999999999985
No 196
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.8e-39 Score=343.99 Aligned_cols=262 Identities=26% Similarity=0.399 Sum_probs=187.0
Q ss_pred HhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
..++|.+.+.||+|+||.||+|.. .+++.||||++.... ....+++.+|+.++++++||||+++++++...+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 457899999999999999999964 468999999986543 334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcCC----CccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCcc
Q 004155 497 EYMENNSLARALFGP----EAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 572 (771)
Q Consensus 497 E~~~~gsL~~~l~~~----~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~ 572 (771)
||+++++|.+++... ......+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 999999999998431 11234689999999999999999999998 89999999999999999999999999997
Q ss_pred ccCCCCc----ccccccccCCCccchhhhcc-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhh-
Q 004155 573 LDEEDNT----HISTRVAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQ- 646 (771)
Q Consensus 573 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~- 646 (771)
....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........... .....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-----~~~~~~ 244 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML-----TLQNDP 244 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH-----HHTSSC
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH-----HhccCC
Confidence 6543221 11233568999999999876 5689999999999999999999999976543322110 00000
Q ss_pred CCh-hHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 647 GNL-MELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 647 ~~~-~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
... ....+......+ ...+.+++.+||+.||++||++.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 245 PSLETGVQDKEMLKKY----GKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCTTC-----CCCCCC----CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred Cccccccccchhhhhh----hHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 000 001111111222 345788999999999999999999986
No 197
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.2e-39 Score=342.74 Aligned_cols=253 Identities=23% Similarity=0.402 Sum_probs=198.6
Q ss_pred HhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 497 (771)
..++|++.+.||+|+||.||+|.. .+|+.||+|++........+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 356889999999999999999965 4689999999987666667889999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCC
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 577 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~ 577 (771)
|+++++|.+++.. ....+++..+..++.||+.||.|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 97 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (302)
T 2j7t_A 97 FCPGGAVDAIMLE---LDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170 (302)
T ss_dssp CCTTEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred eCCCCcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999999843 234699999999999999999999998 8999999999999999999999999997633211
Q ss_pred CcccccccccCCCccchhhhc-----cCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHH
Q 004155 578 NTHISTRVAGTFGYMAPEYAM-----RGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMEL 652 (771)
Q Consensus 578 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (771)
. .......||+.|+|||++. ...++.++||||||+++|||++|+.||......... ....... .
T Consensus 171 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~~~~~~-~--- 239 (302)
T 2j7t_A 171 L-QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL------LKIAKSD-P--- 239 (302)
T ss_dssp H-HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH------HHHHHSC-C---
T ss_pred c-cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH------HHHhccC-C---
Confidence 1 1112346899999999983 667899999999999999999999999754322111 0011100 0
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 653 VDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 653 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
+. ...+......+.+++.+||+.||++|||+.++++
T Consensus 240 --~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 240 --PT--LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp --CC--CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred --cc--cCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00 0111222346889999999999999999999876
No 198
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.4e-38 Score=362.97 Aligned_cols=250 Identities=24% Similarity=0.392 Sum_probs=197.3
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC--hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
.++|++.++||+|+||.||+|.. .++..||+|++.... ......+.+|+.+++.++||||+++++++.+....++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 45788999999999999999954 578999999987542 233567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcC---CCCeEEEeecCccc
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDK---DLNPKISDFGLAKL 573 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DFGla~~ 573 (771)
||+++|+|.+++. ....+++..+..|+.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+++.
T Consensus 116 e~~~~g~L~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 116 ECYKGGELFDEII----HRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp ECCCSCBHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 9999999999883 335689999999999999999999998 8999999999999976 45599999999987
Q ss_pred cCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHh
Q 004155 574 DEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELV 653 (771)
Q Consensus 574 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (771)
...... .....||+.|+|||++. ..++.++|||||||++|+|++|++||......+....+ . .+... ..
T Consensus 189 ~~~~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i------~-~~~~~-~~ 257 (494)
T 3lij_A 189 FENQKK--MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKV------E-KGKYT-FD 257 (494)
T ss_dssp CBTTBC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------H-HTCCC-CC
T ss_pred CCCCcc--ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH------H-hCCCC-CC
Confidence 654322 23456999999999886 56899999999999999999999999765433221111 0 00000 00
Q ss_pred hhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 654 DKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 654 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.+.. . .....+.+++.+||+.||.+|||+.|+++
T Consensus 258 ~~~~-~----~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 258 SPEW-K----NVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp SGGG-T----TSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred chhc-c----cCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 0000 1 12345789999999999999999999985
No 199
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=339.42 Aligned_cols=251 Identities=26% Similarity=0.385 Sum_probs=199.5
Q ss_pred HhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 497 (771)
..++|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 456899999999999999999954 468999999987543 34678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCC
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 577 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~ 577 (771)
|+++++|.+++.. ....+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++.....
T Consensus 105 ~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (314)
T 3com_A 105 YCGAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT 178 (314)
T ss_dssp CCTTEEHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred cCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence 9999999999842 235789999999999999999999998 8999999999999999999999999999866543
Q ss_pred CcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhc
Q 004155 578 NTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRL 657 (771)
Q Consensus 578 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 657 (771)
.. ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.......... ...... .+..
T Consensus 179 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------~~~~~~------~~~~ 245 (314)
T 3com_A 179 MA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF------MIPTNP------PPTF 245 (314)
T ss_dssp BS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH------HHHHSC------CCCC
T ss_pred cc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH------HHhcCC------Cccc
Confidence 22 2234568999999999999999999999999999999999999997543221110 000000 0000
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 658 GSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 658 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
..+......+.+++.+||+.||.+||++.++++
T Consensus 246 --~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 246 --RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp --SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 111122346889999999999999999999986
No 200
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.4e-38 Score=362.25 Aligned_cols=251 Identities=24% Similarity=0.352 Sum_probs=201.2
Q ss_pred HhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 495 (771)
..++|++.++||+|+||+||+|.. .+|+.||||++... .......+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 346799999999999999999954 57899999998643 223467889999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEc---CCCCeEEEeecCcc
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLD---KDLNPKISDFGLAK 572 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~DFGla~ 572 (771)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++ .++.+||+|||+++
T Consensus 100 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 100 GELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp ECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 999999999998832 35699999999999999999999998 899999999999995 55679999999998
Q ss_pred ccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHH
Q 004155 573 LDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMEL 652 (771)
Q Consensus 573 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (771)
....... .....||+.|+|||++.+ .++.++|||||||++|+|++|++||......+....+ . .+...
T Consensus 173 ~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i------~-~~~~~-- 240 (486)
T 3mwu_A 173 CFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV------E-TGKYA-- 240 (486)
T ss_dssp TBCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------H-HTCCC--
T ss_pred ECCCCCc--cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH------H-hCCCC--
Confidence 6654322 234569999999999875 5899999999999999999999999765432221110 0 01000
Q ss_pred hhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 653 VDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 653 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
............+.+++.+||+.||++|||+.|+++
T Consensus 241 ----~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 241 ----FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp ----SCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ----CCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 000000112345789999999999999999999997
No 201
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.9e-38 Score=349.48 Aligned_cols=261 Identities=21% Similarity=0.310 Sum_probs=202.6
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCC--------CCcEEeEEEEEE---
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISALQ--------HPNLVKLHGCCI--- 487 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~--- 487 (771)
.++|++.++||+|+||.||+|. ..+++.||||++... ....+.+.+|+.++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 4678999999999999999994 567899999999753 344567889999999885 788999999987
Q ss_pred -eCCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCC-----
Q 004155 488 -EGNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL----- 561 (771)
Q Consensus 488 -~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~----- 561 (771)
.....++||||+ +++|.+++... ....+++..++.|+.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKS--NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhh
Confidence 456899999999 55666666332 2246999999999999999999999864 799999999999998775
Q ss_pred --------------------------------------------CeEEEeecCccccCCCCcccccccccCCCccchhhh
Q 004155 562 --------------------------------------------NPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYA 597 (771)
Q Consensus 562 --------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~ 597 (771)
.+||+|||+++..... .....||+.|+|||++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHH
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhh
Confidence 8999999999876533 2335689999999999
Q ss_pred ccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHH-HHhhCChh--------------------------
Q 004155 598 MRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALI-LKAQGNLM-------------------------- 650 (771)
Q Consensus 598 ~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~-------------------------- 650 (771)
.+..++.++|||||||++|||++|+.||................. ....+...
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 999999999999999999999999999976543322111111110 00001100
Q ss_pred ------HHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 651 ------ELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 651 ------~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
+.+.. ....+......+.+++.+||+.||++|||+.|+++
T Consensus 346 ~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 346 KPWGLFEVLVE--KYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCHHHHHHH--TSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CCcchhHhhhh--hcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00111 01235667778999999999999999999999985
No 202
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.5e-38 Score=336.12 Aligned_cols=252 Identities=21% Similarity=0.344 Sum_probs=202.9
Q ss_pred HhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC---------hhcHHHHHHHHHHHHcCC-CCcEEeEEEEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS---------KQGNREFVNEIGMISALQ-HPNLVKLHGCCI 487 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 487 (771)
..++|.+.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.+++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 457899999999999999999954 578999999986542 122456889999999995 999999999999
Q ss_pred eCCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEe
Q 004155 488 EGNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISD 567 (771)
Q Consensus 488 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 567 (771)
..+..++||||+++++|.+++.. ...+++..++.++.||+.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~d 167 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTD 167 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred cCCeEEEEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEec
Confidence 99999999999999999999942 35789999999999999999999998 899999999999999999999999
Q ss_pred ecCccccCCCCcccccccccCCCccchhhhc------cCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHH
Q 004155 568 FGLAKLDEEDNTHISTRVAGTFGYMAPEYAM------RGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWAL 641 (771)
Q Consensus 568 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~ 641 (771)
||+++....... .....||+.|+|||++. ...++.++||||||+++|||++|+.||..........
T Consensus 168 fg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~------ 239 (298)
T 1phk_A 168 FGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR------ 239 (298)
T ss_dssp CTTCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH------
T ss_pred ccchhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHH------
Confidence 999987654322 23456899999999985 4568899999999999999999999997543221110
Q ss_pred HHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 642 ILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 642 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.... +.. .............+.+++.+||+.||++||++.|+++
T Consensus 240 ~~~~-~~~------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 240 MIMS-GNY------QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHH-TCC------CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHhc-CCc------ccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 0000 000 0000111123456889999999999999999999986
No 203
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-38 Score=345.61 Aligned_cols=264 Identities=21% Similarity=0.321 Sum_probs=198.1
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeC------C
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIEG------N 490 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 490 (771)
.++|...+.||+|+||.||+|. ..+|+.||||++... .....+.+.+|+.++++++||||+++++++... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 4678899999999999999995 467999999998653 333456789999999999999999999999765 3
Q ss_pred EEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecC
Q 004155 491 QLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 570 (771)
Q Consensus 491 ~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGl 570 (771)
..++||||+ +++|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 469999999 7899999932 4689999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCcccccccccCCCccchhhhcc-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhC--
Q 004155 571 AKLDEEDNTHISTRVAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQG-- 647 (771)
Q Consensus 571 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~-- 647 (771)
++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+....+ .......
T Consensus 175 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i---~~~~g~~~~ 247 (367)
T 1cm8_A 175 ARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEI---MKVTGTPPA 247 (367)
T ss_dssp CEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HHHHCCCCH
T ss_pred ccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HHhcCCCCH
Confidence 9875432 234568999999999887 68999999999999999999999999765432221111 0000000
Q ss_pred ---------ChhHHhhhh--c-CC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HhcCCCC
Q 004155 648 ---------NLMELVDKR--L-GS---NFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS--MLEGRAD 699 (771)
Q Consensus 648 ---------~~~~~~d~~--l-~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~~~~ 699 (771)
.....+... . .. .........+.+++.+||+.||++|||+.|+++ .++....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~ 316 (367)
T 1cm8_A 248 EFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD 316 (367)
T ss_dssp HHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred HHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcC
Confidence 000000000 0 00 001122346889999999999999999999998 4665443
No 204
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.9e-39 Score=345.20 Aligned_cols=260 Identities=21% Similarity=0.309 Sum_probs=201.2
Q ss_pred CCCHHHHHHHhcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCC--CCcEEeEEEE
Q 004155 410 SFTLRQIKAATNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQ--HPNLVKLHGC 485 (771)
Q Consensus 410 ~~~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~ 485 (771)
.+.++.+....++|++.+.||+|+||.||++...+++.||||++... .......+.+|+.++.+++ ||||++++++
T Consensus 17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~ 96 (313)
T 3cek_A 17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY 96 (313)
T ss_dssp ---CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred CCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence 34445555567789999999999999999998888999999998654 3344678899999999997 5999999999
Q ss_pred EEeCCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEE
Q 004155 486 CIEGNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKI 565 (771)
Q Consensus 486 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 565 (771)
+.+.+..++||| +.+++|.+++.. ...+++..++.++.||+.||+|||+. +|+||||||+||++++ +.+||
T Consensus 97 ~~~~~~~~lv~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL 167 (313)
T 3cek_A 97 EITDQYIYMVME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKL 167 (313)
T ss_dssp EECSSEEEEEEC-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEE
T ss_pred eecCCEEEEEEe-cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEE
Confidence 999999999999 567899999943 34689999999999999999999998 8999999999999965 89999
Q ss_pred EeecCccccCCCCcc-cccccccCCCccchhhhcc-----------CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccch
Q 004155 566 SDFGLAKLDEEDNTH-ISTRVAGTFGYMAPEYAMR-----------GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDI 633 (771)
Q Consensus 566 ~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~ 633 (771)
+|||+++........ ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||........
T Consensus 168 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 247 (313)
T 3cek_A 168 IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS 247 (313)
T ss_dssp CCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH
T ss_pred eeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH
Confidence 999999866543322 2234568999999999875 4788999999999999999999999965332111
Q ss_pred hhHHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 634 FYLLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.+...+++.....++......+.+++.+||+.||++||++.|+++
T Consensus 248 --------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 248 --------------KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp --------------HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --------------HHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 011222222222222222356889999999999999999999986
No 205
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.3e-38 Score=348.26 Aligned_cols=274 Identities=22% Similarity=0.309 Sum_probs=203.6
Q ss_pred CHHHHHHHhcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCCh-----------hcHHHHHHHHHHHHcCCCCcEE
Q 004155 412 TLRQIKAATNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSK-----------QGNREFVNEIGMISALQHPNLV 480 (771)
Q Consensus 412 ~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~-----------~~~~~~~~E~~~l~~l~h~niv 480 (771)
...++....++|.+.+.||+|+||.||+|...+|+.||||++..... ...+.+.+|+.++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 45678889999999999999999999999888899999999864321 1237899999999999999999
Q ss_pred eEEEEEEeC-----CEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcE
Q 004155 481 KLHGCCIEG-----NQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNV 555 (771)
Q Consensus 481 ~l~~~~~~~-----~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NI 555 (771)
++++++... ...++||||++ |+|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+||
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NI 165 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ---RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNI 165 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHE
Confidence 999998643 36899999998 5888888532 34799999999999999999999998 899999999999
Q ss_pred EEcCCCCeEEEeecCccccCCCCcccccccccCCCccchhhhcc-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchh
Q 004155 556 LLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIF 634 (771)
Q Consensus 556 ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~ 634 (771)
+++.++.+||+|||+++....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+..
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 243 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTADAN--KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243 (362)
T ss_dssp EECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred EEcCCCCEEEEecCcccccccccc--cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 999999999999999985443222 234568999999999877 67999999999999999999999999765432221
Q ss_pred hHHHHHHHHHhhCChh-----------HHhhhhcCCCC-------CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--Hh
Q 004155 635 YLLDWALILKAQGNLM-----------ELVDKRLGSNF-------DKEQVMVMINVALLCTDVSSTSRPSMSSVVS--ML 694 (771)
Q Consensus 635 ~~~~~~~~~~~~~~~~-----------~~~d~~l~~~~-------~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L 694 (771)
. ............ +.+........ .......+.+++.+||+.||++|||+.|+++ .+
T Consensus 244 ~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f 320 (362)
T 3pg1_A 244 N---KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320 (362)
T ss_dssp H---HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred H---HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchh
Confidence 1 111111111111 11111110000 0112345889999999999999999999987 34
Q ss_pred cCC
Q 004155 695 EGR 697 (771)
Q Consensus 695 ~~~ 697 (771)
+..
T Consensus 321 ~~~ 323 (362)
T 3pg1_A 321 ESL 323 (362)
T ss_dssp TTT
T ss_pred hhc
Confidence 444
No 206
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.1e-38 Score=353.74 Aligned_cols=199 Identities=25% Similarity=0.387 Sum_probs=167.2
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeC-----CE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIEG-----NQ 491 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 491 (771)
.++|.+.+.||+|+||.||+|. ..+|+.||||++... .....+.+.+|+.++++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 4689999999999999999994 556899999999753 334457889999999999999999999999765 57
Q ss_pred EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCc
Q 004155 492 LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 571 (771)
Q Consensus 492 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla 571 (771)
.|+||||++ |+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|
T Consensus 105 ~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKT----PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 999999996 599999943 34699999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCcc---------------------cccccccCCCccchhhh-ccCCCCchHhHHHHHHHHHHHHhCCCCCC
Q 004155 572 KLDEEDNTH---------------------ISTRVAGTFGYMAPEYA-MRGYLTDKADVYSFGIVALEIVSGRSNSS 626 (771)
Q Consensus 572 ~~~~~~~~~---------------------~~~~~~gt~~y~aPE~~-~~~~~~~ksDV~S~Gvil~elltG~~p~~ 626 (771)
+........ ..+...||+.|+|||++ ....++.++|||||||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 876543211 12456799999999986 55679999999999999999998655543
No 207
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.3e-38 Score=360.74 Aligned_cols=247 Identities=27% Similarity=0.406 Sum_probs=200.1
Q ss_pred HhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCCh-------------hcHHHHHHHHHHHHcCCCCcEEeEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSK-------------QGNREFVNEIGMISALQHPNLVKLHG 484 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~ 484 (771)
..++|.+.++||+|+||+||+|. ..+++.||||++..... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 45789999999999999999995 45689999999875421 23567899999999999999999999
Q ss_pred EEEeCCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCC---
Q 004155 485 CCIEGNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDL--- 561 (771)
Q Consensus 485 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~--- 561 (771)
++.+....++||||+++|+|.+++. ....+++..+..|+.||+.||+|||+. +|+||||||+|||++.++
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 186 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQII----NRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLL 186 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHH----HHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCc
Confidence 9999999999999999999999983 235699999999999999999999998 899999999999998776
Q ss_pred CeEEEeecCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHH
Q 004155 562 NPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWAL 641 (771)
Q Consensus 562 ~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~ 641 (771)
.+||+|||+++....... .....||+.|+|||++. +.++.++||||+||++|+|++|++||......+....+
T Consensus 187 ~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i---- 259 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV---- 259 (504)
T ss_dssp SEEECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----
T ss_pred cEEEEECCCCEEcCCCCc--cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----
Confidence 699999999987654322 23456999999999987 46899999999999999999999999765433221111
Q ss_pred HHHhhCChhHHhhhhcCCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 642 ILKAQGNLMELVDKRLGSNFDK----EQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 642 ~~~~~~~~~~~~d~~l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
. .+. . .++. .....+.+++.+||+.||.+|||+.|+++
T Consensus 260 --~-~~~--------~--~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 260 --E-KGK--------Y--YFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp --H-HCC--------C--CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --H-cCC--------C--CCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0 110 0 1111 11245889999999999999999999986
No 208
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=339.79 Aligned_cols=264 Identities=22% Similarity=0.289 Sum_probs=195.1
Q ss_pred hcCCCCCCccccCCceeEEEEEcC-CCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEE-----------
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMA-DGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCI----------- 487 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----------- 487 (771)
.++|.+.+.||+|+||.||+|... +|+.||||++........+.+.+|+.++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 467889999999999999999554 58999999998766666788999999999999999999999873
Q ss_pred ---eCCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEc-CCCCe
Q 004155 488 ---EGNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLD-KDLNP 563 (771)
Q Consensus 488 ---~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~ 563 (771)
+....++||||++ |+|.+++. ...+++..++.++.|++.||+|||+. +|+||||||+||+++ +++.+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLE-----QGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEE
T ss_pred cccccCceeEEeeccC-CCHHHHhh-----cCCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeE
Confidence 3468899999998 59999993 24689999999999999999999998 899999999999997 56799
Q ss_pred EEEeecCccccCCCCc--ccccccccCCCccchhhhcc-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHH
Q 004155 564 KISDFGLAKLDEEDNT--HISTRVAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWA 640 (771)
Q Consensus 564 kl~DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~ 640 (771)
||+|||+++....... .......+|..|+|||.+.+ ..++.++|||||||++|||++|+.||......+........
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 240 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILES 240 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 9999999987643221 11233457999999998875 68899999999999999999999999765432221111000
Q ss_pred H-------HHHhhCChhHHhhhhcCC-CCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 641 L-------ILKAQGNLMELVDKRLGS-NFD-----KEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 641 ~-------~~~~~~~~~~~~d~~l~~-~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
. .......+...+...... ..+ ......+.+++.+||+.||++||++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 0 000000001111111110 001 112346889999999999999999999986
No 209
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.9e-38 Score=345.94 Aligned_cols=265 Identities=20% Similarity=0.254 Sum_probs=195.0
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCC------
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGN------ 490 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 490 (771)
.++|.+.+.||+|+||.||+|. ..+|+.||||++... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 4678999999999999999994 557899999998753 3344567889999999999999999999997654
Q ss_pred EEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecC
Q 004155 491 QLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 570 (771)
Q Consensus 491 ~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGl 570 (771)
..++||||+++ +|.+++. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp EEEEEEECCSE-EHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ceEEEEEcCCC-CHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 78999999975 7888883 3589999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHH------------
Q 004155 571 AKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLD------------ 638 (771)
Q Consensus 571 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~------------ 638 (771)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+......
T Consensus 174 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 251 (371)
T 2xrw_A 174 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 251 (371)
T ss_dssp ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHT
T ss_pred cccccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 98654322 2234578999999999999999999999999999999999999997644322111000
Q ss_pred ----HHHHHHhh------CChhHHhhhhcCCCC---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HhcC
Q 004155 639 ----WALILKAQ------GNLMELVDKRLGSNF---DKEQVMVMINVALLCTDVSSTSRPSMSSVVS--MLEG 696 (771)
Q Consensus 639 ----~~~~~~~~------~~~~~~~d~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~ 696 (771)
........ ..+............ .......+.+++.+||+.||++|||+.|+++ .++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 324 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 324 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred HhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence 00000000 000001101000000 1123567899999999999999999999987 4444
No 210
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=346.84 Aligned_cols=260 Identities=26% Similarity=0.414 Sum_probs=199.8
Q ss_pred CCHHHHHHHhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCChhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEe
Q 004155 411 FTLRQIKAATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSKQGNREFVNEIGMISAL-QHPNLVKLHGCCIE 488 (771)
Q Consensus 411 ~~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 488 (771)
+++.++....++|++.+.||+|+||.||+|.. .+|+.||||++.... .....+.+|+.+++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 44445556778999999999999999999954 578999999987543 3356788999999998 79999999999987
Q ss_pred ------CCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCC
Q 004155 489 ------GNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN 562 (771)
Q Consensus 489 ------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 562 (771)
.+..++||||+++|+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~ 167 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAE 167 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCC
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCC
Confidence 568999999999999999995432 24689999999999999999999998 8999999999999999999
Q ss_pred eEEEeecCccccCCCCcccccccccCCCccchhhhc-----cCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHH
Q 004155 563 PKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAM-----RGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLL 637 (771)
Q Consensus 563 ~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~ 637 (771)
+||+|||++........ ......||+.|+|||++. +..++.++|||||||++|||++|+.||..........
T Consensus 168 ~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-- 244 (326)
T 2x7f_A 168 VKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-- 244 (326)
T ss_dssp EEECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--
T ss_pred EEEeeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH--
Confidence 99999999986543222 123356899999999987 5678999999999999999999999996543221110
Q ss_pred HHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 638 DWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 638 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.... .. .+.. ........+.+++.+||+.||++||++.++++
T Consensus 245 ----~~~~-~~-----~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 245 ----LIPR-NP-----APRL---KSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp ----HHHH-SC-----CCCC---SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ----Hhhc-Cc-----cccC---CccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000 00 0011 11112346889999999999999999999987
No 211
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=7.2e-40 Score=360.55 Aligned_cols=243 Identities=14% Similarity=0.119 Sum_probs=189.4
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccC---ChhcHHHHHHHHH---HHHcCCCCcEEeEE-------EE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSK---SKQGNREFVNEIG---MISALQHPNLVKLH-------GC 485 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~---~l~~l~h~niv~l~-------~~ 485 (771)
.++|.+.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+. ++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999965 56999999998743 3344678899994 55556899999998 66
Q ss_pred EEeCC-----------------EEEEEEEeccCCCHHHHhcCCCc---cCCCCChHHHHHHHHHHHHHHHHhhhcCCCce
Q 004155 486 CIEGN-----------------QLLLIYEYMENNSLARALFGPEA---HRLKLDWPTRHRICVGIARGLAYLHEESRLKI 545 (771)
Q Consensus 486 ~~~~~-----------------~~~lV~E~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~i 545 (771)
+.+.+ ..++||||+ +|+|.+++..... ....+++..++.|+.||+.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 66553 289999999 6799999953211 112344688899999999999999998 89
Q ss_pred eccCCCCCcEEEcCCCCeEEEeecCccccCCCCcccccccccCCCccchhhhccC-----------CCCchHhHHHHHHH
Q 004155 546 VHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRG-----------YLTDKADVYSFGIV 614 (771)
Q Consensus 546 vH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~ksDV~S~Gvi 614 (771)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999985432 2234567 999999999887 89999999999999
Q ss_pred HHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 615 ALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 615 l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
+|||++|+.||......... ..+.. . ....+ ..+.+++.+||+.||++||++.|+++
T Consensus 303 l~elltg~~Pf~~~~~~~~~---------------~~~~~-~-~~~~~----~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAALGGS---------------EWIFR-S-CKNIP----QPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC------CCS---------------GGGGS-S-CCCCC----HHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCcccccccch---------------hhhhh-h-ccCCC----HHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99999999999653322211 11111 0 12222 45788999999999999999999986
No 212
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=3.3e-38 Score=335.36 Aligned_cols=267 Identities=24% Similarity=0.351 Sum_probs=201.8
Q ss_pred cCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCCh--hcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSK--QGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 497 (771)
++|++.+.||+|+||.||+|.. .+|+.||||++..... .....+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 5788999999999999999954 4789999999875432 234678899999999999999999999999999999999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCC
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEED 577 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~ 577 (771)
|++ ++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~~-~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp CCS-EEHHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred ccc-CCHHHHHHhhh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 997 59999985432 24689999999999999999999998 8999999999999999999999999999866433
Q ss_pred CcccccccccCCCccchhhhccCC-CCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCC--hhHH--
Q 004155 578 NTHISTRVAGTFGYMAPEYAMRGY-LTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGN--LMEL-- 652 (771)
Q Consensus 578 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-- 652 (771)
... .....||+.|+|||.+.+.. ++.++|||||||++|||++|+.||......+.. ............ ....
T Consensus 157 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 233 (299)
T 2r3i_A 157 VRT-YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL--FRIFRTLGTPDEVVWPGVTS 233 (299)
T ss_dssp SBC-TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH--HHHHHHHCCCCTTTSTTGGG
T ss_pred ccc-cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHH--HHHHHHhCCCchhhhhHhhc
Confidence 221 23346899999999998764 899999999999999999999999765432211 111111100000 0000
Q ss_pred ---hhhhcCCC--CC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HhcC
Q 004155 653 ---VDKRLGSN--FD-----KEQVMVMINVALLCTDVSSTSRPSMSSVVS--MLEG 696 (771)
Q Consensus 653 ---~d~~l~~~--~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~ 696 (771)
..+..... .. ......+.+++.+|++.||++|||+.|+++ .+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~ 289 (299)
T 2r3i_A 234 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289 (299)
T ss_dssp STTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTT
T ss_pred CcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhc
Confidence 00000000 00 012346789999999999999999999987 4444
No 213
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=5.2e-38 Score=344.03 Aligned_cols=267 Identities=22% Similarity=0.296 Sum_probs=204.7
Q ss_pred HhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeC-----CE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEG-----NQ 491 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 491 (771)
..++|++.+.||+|+||.||+|. ..+++.||||++.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 35689999999999999999995 4578999999997543 33457789999999999999999999999754 46
Q ss_pred EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCc
Q 004155 492 LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 571 (771)
Q Consensus 492 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla 571 (771)
.++||||++ |+|.+++. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~iv~e~~~-~~L~~~l~-----~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp EEEEEECCS-EEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEcccC-cCHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcce
Confidence 899999997 59999983 34699999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCccc--ccccccCCCccchhhhcc-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCC
Q 004155 572 KLDEEDNTHI--STRVAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGN 648 (771)
Q Consensus 572 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 648 (771)
+......... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+...... .......
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~---~~~~~~~ 252 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL---GILGSPS 252 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHH---HHHCSCC
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHH---HHhCCCC
Confidence 8765432221 234579999999998764 458999999999999999999999997655443322111 1000000
Q ss_pred hh-----------HHhhhhc-CCCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HhcCC
Q 004155 649 LM-----------ELVDKRL-GSNFD-----KEQVMVMINVALLCTDVSSTSRPSMSSVVS--MLEGR 697 (771)
Q Consensus 649 ~~-----------~~~d~~l-~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~~ 697 (771)
.. ....... ....+ ......+.+++.+||+.||++|||+.|+++ .+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 320 (364)
T 3qyz_A 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 320 (364)
T ss_dssp HHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred HHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence 00 0000000 00011 112345889999999999999999999997 35443
No 214
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=9.2e-39 Score=363.66 Aligned_cols=251 Identities=26% Similarity=0.371 Sum_probs=203.7
Q ss_pred HhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLL 494 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 494 (771)
..++|++.++||+|+||.||+|.. .+|+.||||++.... ......+.+|+.++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 346788999999999999999954 578999999986542 3456789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEE---cCCCCeEEEeecCc
Q 004155 495 IYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLL---DKDLNPKISDFGLA 571 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~DFGla 571 (771)
||||+.+|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||++
T Consensus 104 v~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 104 VGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp EECCCCSCBHHHHHHT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 9999999999999843 34699999999999999999999998 89999999999999 56789999999999
Q ss_pred cccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhH
Q 004155 572 KLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLME 651 (771)
Q Consensus 572 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (771)
+....... .....||+.|+|||++.+ .++.++||||+||++|+|++|++||......+.... . ..+...
T Consensus 177 ~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~---i----~~~~~~- 245 (484)
T 3nyv_A 177 THFEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK---V----EKGKYT- 245 (484)
T ss_dssp HHBCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---H----HHCCCC-
T ss_pred EEcccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHH---H----HcCCCC-
Confidence 87654332 233569999999999876 689999999999999999999999976543222111 0 011000
Q ss_pred HhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 652 LVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 652 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
............+.+++.+||+.||++|||+.|+++
T Consensus 246 -----~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 246 -----FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp -----CCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 000000122345789999999999999999999986
No 215
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.3e-38 Score=353.03 Aligned_cols=201 Identities=22% Similarity=0.315 Sum_probs=173.1
Q ss_pred HhcCCCCCCccccCCceeEEEE-EcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcC------CCCcEEeEEEEEEeCCE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKG-HMADGTVVAVKQLSSKSKQGNREFVNEIGMISAL------QHPNLVKLHGCCIEGNQ 491 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~-~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~ 491 (771)
...+|++.++||+|+||.||+| ...+++.||||++... ....+.+.+|+.+++.+ +|+||+++++++...+.
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 3467899999999999999999 4556899999999753 33456777888888776 57799999999999999
Q ss_pred EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCC--eEEEeec
Q 004155 492 LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN--PKISDFG 569 (771)
Q Consensus 492 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~DFG 569 (771)
.++||||+. ++|.+++.... ...+++..+..|+.||+.||+|||+. +|+||||||+|||++.++. +||+|||
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG 247 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKNK--FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFG 247 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred EEEEEeccC-CCHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecc
Confidence 999999996 69999985432 23589999999999999999999998 8999999999999999987 9999999
Q ss_pred CccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCc
Q 004155 570 LAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPK 630 (771)
Q Consensus 570 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~ 630 (771)
+++...... ....||+.|+|||++.+..++.++|||||||++|||++|++||.....
T Consensus 248 ~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~ 304 (429)
T 3kvw_A 248 SSCYEHQRV----YTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304 (429)
T ss_dssp TCEETTCCC----CSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cceecCCcc----cccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 997654322 235689999999999999999999999999999999999999976544
No 216
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.5e-38 Score=374.48 Aligned_cols=249 Identities=22% Similarity=0.344 Sum_probs=204.6
Q ss_pred HhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccC---ChhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeCCEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSK---SKQGNREFVNEIGMISAL-QHPNLVKLHGCCIEGNQLL 493 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 493 (771)
..++|++.++||+|+||.||+|. ..+++.||||+++.. .....+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 45789999999999999999995 456889999998753 223346788899999988 7999999999999999999
Q ss_pred EEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccc
Q 004155 494 LIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 573 (771)
Q Consensus 494 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~ 573 (771)
+||||+++|+|.+++.. ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++++||+|||+|+.
T Consensus 419 lV~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEeCcCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 99999999999999942 34699999999999999999999998 899999999999999999999999999986
Q ss_pred cCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHh
Q 004155 574 DEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELV 653 (771)
Q Consensus 574 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (771)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+... .++
T Consensus 492 ~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~---------------~i~ 555 (674)
T 3pfq_A 492 NIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ---------------SIM 555 (674)
T ss_dssp CCCTTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---------------HHH
T ss_pred cccCCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHH---------------HHH
Confidence 433322 2345679999999999999999999999999999999999999997644322211 111
Q ss_pred hhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 004155 654 DKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSM-----SSVVS 692 (771)
Q Consensus 654 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~ 692 (771)
... ..++......+.+++.+||+.||++||++ .||++
T Consensus 556 ~~~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 556 EHN--VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp SSC--CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred hCC--CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 111 12222334568899999999999999998 66654
No 217
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.9e-38 Score=338.90 Aligned_cols=252 Identities=23% Similarity=0.325 Sum_probs=195.8
Q ss_pred HhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCCh--------hcHHHHHHHHHHHHcCCCCcEEeEEEEEEeC
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSK--------QGNREFVNEIGMISALQHPNLVKLHGCCIEG 489 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 489 (771)
..++|.+.+.||+|+||.||+|. ..+++.||||++..... .....+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 45679999999999999999995 45689999999865321 1234588999999999999999999998765
Q ss_pred CEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCC---eEEE
Q 004155 490 NQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN---PKIS 566 (771)
Q Consensus 490 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~ 566 (771)
+ .++||||+++++|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp S-EEEEEECCTTEETHHHHST----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred c-eEEEEecCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEc
Confidence 5 8999999999999999943 34689999999999999999999998 8999999999999987664 9999
Q ss_pred eecCccccCCCCcccccccccCCCccchhhhc---cCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHH
Q 004155 567 DFGLAKLDEEDNTHISTRVAGTFGYMAPEYAM---RGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALIL 643 (771)
Q Consensus 567 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~ 643 (771)
|||+++...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||......... ....
T Consensus 160 Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~--- 232 (322)
T 2ycf_A 160 DFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL--KDQI--- 232 (322)
T ss_dssp CCTTCEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCH--HHHH---
T ss_pred cCccceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHH--HHHH---
Confidence 999998764332 223356899999999974 567899999999999999999999999754332211 1100
Q ss_pred HhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 644 KAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 644 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
..+... . .+..... ....+.+++.+||+.||++||++.|+++
T Consensus 233 -~~~~~~-~-~~~~~~~----~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 233 -TSGKYN-F-IPEVWAE----VSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp -HHTCCC-C-CHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -HhCccc-c-Cchhhhh----cCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 011000 0 0000011 2346889999999999999999999986
No 218
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.2e-38 Score=348.31 Aligned_cols=275 Identities=19% Similarity=0.265 Sum_probs=194.8
Q ss_pred HHHHHHhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCE-
Q 004155 414 RQIKAATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQ- 491 (771)
Q Consensus 414 ~~l~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~- 491 (771)
.+.....++|.+.+.||+|+||.||+|.. .+|+.||||++.... .....+.+|+..++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 45667788999999999999999999954 568999999986543 223456778888899999999999999975433
Q ss_pred ------EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhh--hcCCCceeccCCCCCcEEEcC-CCC
Q 004155 492 ------LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLH--EESRLKIVHRDIKATNVLLDK-DLN 562 (771)
Q Consensus 492 ------~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH--~~~~~~ivH~Dlkp~NIll~~-~~~ 562 (771)
.++||||+++ +|.+.+.........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCc
Confidence 8999999986 555554322223457899999999999999999999 66 8999999999999996 899
Q ss_pred eEEEeecCccccCCCCcccccccccCCCccchhhhccC-CCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHH
Q 004155 563 PKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWAL 641 (771)
Q Consensus 563 ~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~ 641 (771)
+||+|||+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||............ ..
T Consensus 171 ~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~--~~ 246 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEI--VR 246 (360)
T ss_dssp EEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--HH
T ss_pred EEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHH--HH
Confidence 99999999987654332 2345689999999998765 4899999999999999999999999765433222111 11
Q ss_pred HHHhhC-ChhHHhhh----------------hcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HhcCC
Q 004155 642 ILKAQG-NLMELVDK----------------RLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS--MLEGR 697 (771)
Q Consensus 642 ~~~~~~-~~~~~~d~----------------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~~ 697 (771)
...... .....+++ .............+.+++.+||+.||++|||+.|+++ .+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 321 (360)
T 3e3p_A 247 VLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDEL 321 (360)
T ss_dssp HHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGG
T ss_pred HcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcccccc
Confidence 100000 00000000 0001111123567899999999999999999999986 35544
No 219
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=345.07 Aligned_cols=262 Identities=23% Similarity=0.396 Sum_probs=199.6
Q ss_pred HhcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCC--hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKS--KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
..++|++.+.||+|+||.||+|...+ .||+|+++... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 45788899999999999999997643 49999987542 223456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 576 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~ 576 (771)
||+++++|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+||+++ ++.+||+|||+++....
T Consensus 109 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp BCCCSEEHHHHTTSS---CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred ecccCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 999999999999432 34689999999999999999999998 899999999999998 67999999999875532
Q ss_pred CC----cccccccccCCCccchhhhcc---------CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHH
Q 004155 577 DN----THISTRVAGTFGYMAPEYAMR---------GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALIL 643 (771)
Q Consensus 577 ~~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~ 643 (771)
.. ........||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.......... ..
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~------~~ 255 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW------QM 255 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHH------HH
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH------Hh
Confidence 11 112233458999999999874 457899999999999999999999997544322111 01
Q ss_pred HhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCCCCCC
Q 004155 644 KAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADVQDFV 704 (771)
Q Consensus 644 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 704 (771)
. .+ ..+... .......+.+++.+||+.||++||++.+++++|+.+.......
T Consensus 256 ~-~~-----~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~ 307 (319)
T 2y4i_B 256 G-TG-----MKPNLS---QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRL 307 (319)
T ss_dssp H-TT-----CCCCCC---CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-------
T ss_pred c-cC-----CCCCCC---cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccC
Confidence 0 11 001110 0112235789999999999999999999999999987654433
No 220
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=5.3e-38 Score=334.73 Aligned_cols=256 Identities=21% Similarity=0.269 Sum_probs=199.9
Q ss_pred HhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC----hhcHHHHHHHHHHHHcCCCCcEEeEEEEEE--eCCE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS----KQGNREFVNEIGMISALQHPNLVKLHGCCI--EGNQ 491 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~ 491 (771)
..++|.+.+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+.++++++||||+++++++. +.+.
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 347899999999999999999965 568999999987542 234578999999999999999999999985 4567
Q ss_pred EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCc
Q 004155 492 LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 571 (771)
Q Consensus 492 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla 571 (771)
.++||||++++ |.+++.... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~ 156 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVP--EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVA 156 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHST--TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEehhccCC-HHHHHHhCc--ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccc
Confidence 89999999876 777774322 34689999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCC-cccccccccCCCccchhhhccCC--CCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCC
Q 004155 572 KLDEEDN-THISTRVAGTFGYMAPEYAMRGY--LTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGN 648 (771)
Q Consensus 572 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 648 (771)
+...... ........||+.|+|||++.+.. .+.++||||||+++|||++|+.||.......... ... .+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------~i~-~~- 228 (305)
T 2wtk_C 157 EALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFE------NIG-KG- 228 (305)
T ss_dssp EECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH------HHH-HC-
T ss_pred cccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH------HHh-cC-
Confidence 8664322 22223456899999999997643 4789999999999999999999997543221111 000 11
Q ss_pred hhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HhcCC
Q 004155 649 LMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS--MLEGR 697 (771)
Q Consensus 649 ~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~~ 697 (771)
. ...+......+.+++.+||+.||++||++.|+++ .+++.
T Consensus 229 -------~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~ 270 (305)
T 2wtk_C 229 -------S--YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKK 270 (305)
T ss_dssp -------C--CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSC
T ss_pred -------C--CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccC
Confidence 0 0111223345789999999999999999999996 45543
No 221
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.1e-38 Score=346.65 Aligned_cols=258 Identities=21% Similarity=0.300 Sum_probs=203.1
Q ss_pred hcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhc-----------------HHHHHHHHHHHHcCCCCcEEeE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQG-----------------NREFVNEIGMISALQHPNLVKL 482 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l 482 (771)
.++|.+.+.||+|+||.||+|.. +|+.||||++....... .+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46889999999999999999987 89999999986532111 1789999999999999999999
Q ss_pred EEEEEeCCEEEEEEEeccCCCHHHH------hcCCCccCCCCChHHHHHHHHHHHHHHHHhhh-cCCCceeccCCCCCcE
Q 004155 483 HGCCIEGNQLLLIYEYMENNSLARA------LFGPEAHRLKLDWPTRHRICVGIARGLAYLHE-ESRLKIVHRDIKATNV 555 (771)
Q Consensus 483 ~~~~~~~~~~~lV~E~~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~-~~~~~ivH~Dlkp~NI 555 (771)
++++.+.+..++||||+++|+|.++ +.. .....+++..++.++.||+.||+|||+ . +|+||||||+||
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK--NYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNI 183 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCS--SSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhh--ccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhE
Confidence 9999999999999999999999998 522 124679999999999999999999998 7 899999999999
Q ss_pred EEcCCCCeEEEeecCccccCCCCcccccccccCCCccchhhhccC-CCCc-hHhHHHHHHHHHHHHhCCCCCCCCCccch
Q 004155 556 LLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRG-YLTD-KADVYSFGIVALEIVSGRSNSSCKPKEDI 633 (771)
Q Consensus 556 ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-ksDV~S~Gvil~elltG~~p~~~~~~~~~ 633 (771)
+++.++.+||+|||+++..... ......||..|+|||.+.+. .++. ++|||||||++|||++|+.||........
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 260 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE 260 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH
T ss_pred EEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH
Confidence 9999999999999999876443 22345689999999999877 6666 99999999999999999999976443111
Q ss_pred hhHHHHHHHHHhhCChhH------HhhhhcC---CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 634 FYLLDWALILKAQGNLME------LVDKRLG---SNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~------~~d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.... . ..+...- ...+... ..........+.+++.+||+.||.+||++.|+++
T Consensus 261 --~~~~---i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 261 --LFNN---I-RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp --HHHH---H-TSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred --HHHH---H-hccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1110 0 0110000 0000000 0000223356889999999999999999999987
No 222
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.3e-38 Score=371.73 Aligned_cols=259 Identities=24% Similarity=0.342 Sum_probs=205.3
Q ss_pred HHHHhcCCCCCCccccCCceeEEEEEcC----CCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCC
Q 004155 416 IKAATNNFAPDNKIGEGGFGPVYKGHMA----DGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEGN 490 (771)
Q Consensus 416 l~~~~~~f~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 490 (771)
.....++|.+.+.||+|+||.||+|... .+..||||+++... ....+.+.+|+.++++++||||+++++++. ++
T Consensus 385 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~ 463 (656)
T 2j0j_A 385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-EN 463 (656)
T ss_dssp TBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SS
T ss_pred cccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cC
Confidence 3344567888999999999999999653 25689999987643 344578999999999999999999999985 46
Q ss_pred EEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecC
Q 004155 491 QLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 570 (771)
Q Consensus 491 ~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGl 570 (771)
..++||||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 464 ~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~ 537 (656)
T 2j0j_A 464 PVWIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGL 537 (656)
T ss_dssp SCEEEEECCTTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCC
T ss_pred ceEEEEEcCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCC
Confidence 689999999999999999432 34689999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhCCh
Q 004155 571 AKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQGNL 649 (771)
Q Consensus 571 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (771)
++..............+|+.|+|||++.+..++.++|||||||++|||++ |..||......+.. .. ..
T Consensus 538 a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~---~~---i~----- 606 (656)
T 2j0j_A 538 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI---GR---IE----- 606 (656)
T ss_dssp CCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH---HH---HH-----
T ss_pred CeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHH---HH---HH-----
Confidence 98765544333344567889999999999999999999999999999997 99999754432211 11 00
Q ss_pred hHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 004155 650 MELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGR 697 (771)
Q Consensus 650 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 697 (771)
.......+......+.+++.+||+.||++||++.|+++.|+.+
T Consensus 607 -----~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 607 -----NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp -----HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -----cCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 0111112223345688999999999999999999999999875
No 223
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.1e-38 Score=349.50 Aligned_cols=266 Identities=22% Similarity=0.308 Sum_probs=196.8
Q ss_pred hcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCC------EEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEGN------QLL 493 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~ 493 (771)
..+|.+.++||+|+||.||+|...++..||+|++...... ..+|+++++.++||||+++++++.... ..+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 3468889999999999999998767777999988654322 236999999999999999999996543 388
Q ss_pred EEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEc-CCCCeEEEeecCcc
Q 004155 494 LIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLD-KDLNPKISDFGLAK 572 (771)
Q Consensus 494 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~DFGla~ 572 (771)
+||||++++ +.+.+.........+++..+..++.||+.||+|||+. +|+||||||+|||++ .++.+||+|||+|+
T Consensus 115 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 115 LVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 999999874 4444322122345799999999999999999999998 899999999999999 79999999999998
Q ss_pred ccCCCCcccccccccCCCccchhhhccC-CCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhH
Q 004155 573 LDEEDNTHISTRVAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLME 651 (771)
Q Consensus 573 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (771)
........ ....||+.|+|||++.+. .++.++|||||||++|||++|++||......+.. ....... .......
T Consensus 191 ~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l--~~i~~~~-g~p~~~~ 265 (394)
T 4e7w_A 191 ILIAGEPN--VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQL--VEIIKVL-GTPSREQ 265 (394)
T ss_dssp ECCTTCCC--CSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHHH-CCCCHHH
T ss_pred cccCCCCC--cccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHHh-CCCCHHH
Confidence 76443322 345689999999998765 5899999999999999999999999765433221 1111111 0000000
Q ss_pred H--hhhhc-----CC--C------CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HhcCCC
Q 004155 652 L--VDKRL-----GS--N------FDKEQVMVMINVALLCTDVSSTSRPSMSSVVS--MLEGRA 698 (771)
Q Consensus 652 ~--~d~~l-----~~--~------~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~~~ 698 (771)
+ .++.. .. . +.......+.+++.+||+.||++|||+.|+++ .+++..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 266 IKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp HHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred HHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 0 00000 00 0 01112346889999999999999999999987 355543
No 224
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=4.2e-38 Score=340.17 Aligned_cols=262 Identities=19% Similarity=0.267 Sum_probs=203.1
Q ss_pred hcCCCCCCccccCCceeEEEEEc--CCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCC------cEEeEEEEEEeCCE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM--ADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHP------NLVKLHGCCIEGNQ 491 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~~~~ 491 (771)
.++|++.+.||+|+||.||+|.. .+|+.||||+++.. ....+.+.+|+.+++.++|+ +++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 46889999999999999999954 46899999999753 34456788999999888655 59999999999999
Q ss_pred EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcC------------
Q 004155 492 LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDK------------ 559 (771)
Q Consensus 492 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~------------ 559 (771)
.++||||+ +++|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+|||++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENG--FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----
T ss_pred EEEEEcCC-CCCHHHHHHhcC--CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccc
Confidence 99999999 889999995432 24689999999999999999999998 8999999999999987
Q ss_pred -------CCCeEEEeecCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccc
Q 004155 560 -------DLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKED 632 (771)
Q Consensus 560 -------~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~ 632 (771)
++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||......+
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 241 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDEHH----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE 241 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTSCC----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH
T ss_pred cccccccCCCceEeeCcccccCcccc----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence 6789999999998654322 33568999999999999999999999999999999999999997654433
Q ss_pred hhhHHHHHHH-----HHhhCCh-----------------hHHhhhhc-----CCCCCHHHHHHHHHHHHHccCCCCCCCC
Q 004155 633 IFYLLDWALI-----LKAQGNL-----------------MELVDKRL-----GSNFDKEQVMVMINVALLCTDVSSTSRP 685 (771)
Q Consensus 633 ~~~~~~~~~~-----~~~~~~~-----------------~~~~d~~l-----~~~~~~~~~~~l~~l~~~Cl~~dP~~RP 685 (771)
.......... ....... ...+.... ...........+.+++.+||+.||++||
T Consensus 242 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 321 (339)
T 1z57_A 242 HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI 321 (339)
T ss_dssp HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccccc
Confidence 2221111100 0000000 00000000 0011234567789999999999999999
Q ss_pred CHHHHHH
Q 004155 686 SMSSVVS 692 (771)
Q Consensus 686 s~~evl~ 692 (771)
|+.|+++
T Consensus 322 t~~ell~ 328 (339)
T 1z57_A 322 TLREALK 328 (339)
T ss_dssp CHHHHTT
T ss_pred CHHHHhc
Confidence 9999975
No 225
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.6e-38 Score=345.41 Aligned_cols=263 Identities=23% Similarity=0.336 Sum_probs=187.0
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeC------C
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIEG------N 490 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 490 (771)
.++|.+.+.||+|+||.||+|. ..+|+.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 4688999999999999999994 567999999998653 334467788999999999999999999998754 5
Q ss_pred EEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecC
Q 004155 491 QLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 570 (771)
Q Consensus 491 ~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGl 570 (771)
..++|+||+ +++|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred eEEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 689999999 6799988832 4699999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCcccccccccCCCccchhhhcc-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhC--
Q 004155 571 AKLDEEDNTHISTRVAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQG-- 647 (771)
Q Consensus 571 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~-- 647 (771)
++..... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||......+....+ .......
T Consensus 179 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i---~~~~g~p~~ 251 (367)
T 2fst_X 179 ARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI---LRLVGTPGA 251 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---HHHHCSCCH
T ss_pred ccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HHHhCCCCH
Confidence 9865432 234578999999999887 68899999999999999999999999765432221111 1110000
Q ss_pred ---------ChhHHhhhhcC-CCCCH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHH--HhcCCC
Q 004155 648 ---------NLMELVDKRLG-SNFDK-----EQVMVMINVALLCTDVSSTSRPSMSSVVS--MLEGRA 698 (771)
Q Consensus 648 ---------~~~~~~d~~l~-~~~~~-----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~~~ 698 (771)
.....+..... ..... .....+.+|+.+||+.||++|||+.|+++ .++...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~ 319 (367)
T 2fst_X 252 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 319 (367)
T ss_dssp HHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred HHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhcc
Confidence 00011110000 00111 11245789999999999999999999987 354443
No 226
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.2e-37 Score=343.36 Aligned_cols=211 Identities=23% Similarity=0.299 Sum_probs=176.4
Q ss_pred CCHHHHHHHhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCC-CC-----cEEeEE
Q 004155 411 FTLRQIKAATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISALQ-HP-----NLVKLH 483 (771)
Q Consensus 411 ~~~~~l~~~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~ 483 (771)
+..+......++|.+.++||+|+||.||+|. ..+++.||||+++.. .....++..|+.+++.++ |+ +|++++
T Consensus 44 ~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~ 122 (382)
T 2vx3_A 44 YIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLK 122 (382)
T ss_dssp BCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEE
T ss_pred EEeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEee
Confidence 3344445567899999999999999999995 457899999999753 334567788998888874 44 499999
Q ss_pred EEEEeCCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEc--CCC
Q 004155 484 GCCIEGNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLD--KDL 561 (771)
Q Consensus 484 ~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~--~~~ 561 (771)
+++...+..++||||++ |+|.+++.... ...+++..+..++.|++.||.|||.+ ..+|+||||||+|||++ .++
T Consensus 123 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~ 198 (382)
T 2vx3_A 123 RHFMFRNHLCLVFEMLS-YNLYDLLRNTN--FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRS 198 (382)
T ss_dssp EEEEETTEEEEEEECCC-CBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSC
T ss_pred eeeccCCceEEEEecCC-CCHHHHHhhcC--cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCC
Confidence 99999999999999996 59999995432 24589999999999999999999953 23899999999999994 578
Q ss_pred CeEEEeecCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCc
Q 004155 562 NPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPK 630 (771)
Q Consensus 562 ~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~ 630 (771)
.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||++||.....
T Consensus 199 ~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~ 263 (382)
T 2vx3_A 199 AIKIVDFGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263 (382)
T ss_dssp CEEECCCTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cEEEEeccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 8999999999876432 2335689999999999999999999999999999999999999986543
No 227
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.5e-38 Score=354.97 Aligned_cols=259 Identities=24% Similarity=0.316 Sum_probs=193.9
Q ss_pred cCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeC------CEEE
Q 004155 421 NNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIEG------NQLL 493 (771)
Q Consensus 421 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~ 493 (771)
.+|...+.||+|+||.||+|.. .+|+.||||++..... .+.+|++++++++||||++++++|... ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 3578889999999999999965 5689999999865432 234699999999999999999998642 2467
Q ss_pred EEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCC-CCeEEEeecCcc
Q 004155 494 LIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKD-LNPKISDFGLAK 572 (771)
Q Consensus 494 lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~DFGla~ 572 (771)
+||||+++ +|.+.+.........+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999986 67666643223345799999999999999999999998 89999999999999965 568999999998
Q ss_pred ccCCCCcccccccccCCCccchhhhccC-CCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhH
Q 004155 573 LDEEDNTHISTRVAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLME 651 (771)
Q Consensus 573 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (771)
....... .....||+.|+|||++.+. .++.++|||||||++|||++|++||......+. +.+...... ......
T Consensus 206 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~--l~~i~~~lg-~p~~~~ 280 (420)
T 1j1b_A 206 QLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ--LVEIIKVLG-TPTREQ 280 (420)
T ss_dssp ECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHHC-SCCHHH
T ss_pred hcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhC-CCCHHH
Confidence 7644332 2335689999999999765 799999999999999999999999976443222 111111110 000000
Q ss_pred H--hhhhc--------CCC-----CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 652 L--VDKRL--------GSN-----FDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 652 ~--~d~~l--------~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
+ .++.. ... +.......+.+|+.+||+.||++||++.|+++
T Consensus 281 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 281 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 0 00000 000 01122356889999999999999999999986
No 228
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.6e-38 Score=335.02 Aligned_cols=252 Identities=26% Similarity=0.423 Sum_probs=193.4
Q ss_pred HhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEe---------
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIE--------- 488 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------- 488 (771)
..++|++.+.||+|+||.||+|. ..+|+.||||++.. .....+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 35678999999999999999995 45799999999865 33445778999999999999999999999865
Q ss_pred ----CCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeE
Q 004155 489 ----GNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPK 564 (771)
Q Consensus 489 ----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 564 (771)
.+..++||||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHS---CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred ccccCCceEEEEecCCCCCHHHhhhcc---ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEE
Confidence 35689999999999999999532 34578899999999999999999998 899999999999999999999
Q ss_pred EEeecCccccCCCC-------------cccccccccCCCccchhhhccC-CCCchHhHHHHHHHHHHHHhCCCCCCCCCc
Q 004155 565 ISDFGLAKLDEEDN-------------THISTRVAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSGRSNSSCKPK 630 (771)
Q Consensus 565 l~DFGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~S~Gvil~elltG~~p~~~~~~ 630 (771)
|+|||+++...... ........||+.|+|||++.+. .++.++|||||||++|||++ ||...
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~-- 231 (303)
T 1zy4_A 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG-- 231 (303)
T ss_dssp ECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH--
T ss_pred EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc--
Confidence 99999998654321 1112345689999999999864 78999999999999999998 44321
Q ss_pred cchhhHHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 631 EDIFYLLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.+ .......... ....+....+......+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~---~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 232 ME---RVNILKKLRS-------VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HH---HHHHHHHHHS-------TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hh---HHHHHHhccc-------cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 01 1111111110 0111122233344556889999999999999999999997
No 229
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=9e-39 Score=351.01 Aligned_cols=253 Identities=9% Similarity=0.011 Sum_probs=181.2
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCCh---hcHHHHHHHH---HHHHcCCCCcEEeEE-------EE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSK---QGNREFVNEI---GMISALQHPNLVKLH-------GC 485 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~~E~---~~l~~l~h~niv~l~-------~~ 485 (771)
..+|...+.||+|+||.||+|. ..+|+.||||++..... ...+.+.+|+ ..|+. +||||++++ ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 3458889999999999999996 45789999999987542 3345677785 45555 799988755 45
Q ss_pred EEeC-----------------CEEEEEEEeccCCCHHHHhcCCCccCCCCChHHH------HHHHHHHHHHHHHhhhcCC
Q 004155 486 CIEG-----------------NQLLLIYEYMENNSLARALFGPEAHRLKLDWPTR------HRICVGIARGLAYLHEESR 542 (771)
Q Consensus 486 ~~~~-----------------~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~ia~aL~~LH~~~~ 542 (771)
+... ...++||||++ |+|.+++... ...+.+..+ +.++.||+.||+|||++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~-- 213 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---DFVYVFRGDEGILALHILTAQLIRLAANLQSK-- 213 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC--
Confidence 5433 34899999998 8999999432 224566667 78889999999999998
Q ss_pred CceeccCCCCCcEEEcCCCCeEEEeecCccccCCCCcccccccccCCCccchhhhcc--CCCCchHhHHHHHHHHHHHHh
Q 004155 543 LKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMR--GYLTDKADVYSFGIVALEIVS 620 (771)
Q Consensus 543 ~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~ksDV~S~Gvil~ellt 620 (771)
+|+||||||+|||++.++.+||+|||+++...... ....+|+.|+|||++.+ ..++.++|||||||++|||++
T Consensus 214 -~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ellt 288 (371)
T 3q60_A 214 -GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWC 288 (371)
T ss_dssp -TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHH
T ss_pred -CCccCcCCHHHEEECCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHh
Confidence 89999999999999999999999999998654321 13457799999999987 679999999999999999999
Q ss_pred CCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 621 GRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 621 G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
|+.||........... ........................+.+++.+||+.||++|||+.|+++
T Consensus 289 g~~Pf~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 289 LFLPFGLVTPGIKGSW--------KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp SSCSTTBCCTTCTTCC--------CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCCCcCcccccch--------hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 9999976532211000 000000000001100111123456889999999999999999999874
No 230
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=7.8e-38 Score=336.73 Aligned_cols=263 Identities=24% Similarity=0.367 Sum_probs=199.4
Q ss_pred HhcCCCCCCccccCCceeEEEEEc--CCCcEEEEEEcccCCh--hcHHHHHHHHHHHHcC---CCCcEEeEEEEEE----
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHM--ADGTVVAVKQLSSKSK--QGNREFVNEIGMISAL---QHPNLVKLHGCCI---- 487 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~--~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~---- 487 (771)
+.++|++.+.||+|+||.||+|.. .+|+.||+|++..... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 567899999999999999999965 4688999999864321 1223566777777665 8999999999987
Q ss_pred -eCCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEE
Q 004155 488 -EGNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKIS 566 (771)
Q Consensus 488 -~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 566 (771)
.....++||||++ |+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 4567899999998 69999985432 23589999999999999999999998 89999999999999999999999
Q ss_pred eecCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhh
Q 004155 567 DFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQ 646 (771)
Q Consensus 567 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 646 (771)
|||+++...... ......||..|+|||++.+..++.++|||||||++|||++|+.||......+.. .........
T Consensus 163 Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~i~~~~~~ 237 (326)
T 1blx_A 163 DFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL---GKILDVIGL 237 (326)
T ss_dssp SCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCC
T ss_pred cCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH---HHHHHHcCC
Confidence 999998654322 223456899999999999999999999999999999999999999765432221 111111000
Q ss_pred CChhHH------hhhhcC-------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 647 GNLMEL------VDKRLG-------SNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 647 ~~~~~~------~d~~l~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
...... ...... ..........+.+++.+||+.||++||++.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000 000000 0011122345789999999999999999999985
No 231
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.5e-37 Score=338.62 Aligned_cols=267 Identities=20% Similarity=0.284 Sum_probs=202.1
Q ss_pred HhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC-hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeC-----CE
Q 004155 419 ATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS-KQGNREFVNEIGMISALQHPNLVKLHGCCIEG-----NQ 491 (771)
Q Consensus 419 ~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 491 (771)
..++|.+.+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.++++++||||+++++++... ..
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 356899999999999999999954 578999999997543 33456788999999999999999999998754 67
Q ss_pred EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCc
Q 004155 492 LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 571 (771)
Q Consensus 492 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla 571 (771)
.++||||+. |+|.+++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 89 ~~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVIS-----TQMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp EEEEECCCS-EEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeccC-ccHHHHHh-----hcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccc
Confidence 899999997 59999983 24689999999999999999999998 8999999999999999999999999999
Q ss_pred cccCCCCcc---------cccccccCCCccchhhhcc-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHH
Q 004155 572 KLDEEDNTH---------ISTRVAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWAL 641 (771)
Q Consensus 572 ~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~ 641 (771)
+........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............ .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---~ 236 (353)
T 2b9h_A 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI---F 236 (353)
T ss_dssp EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH---H
T ss_pred cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH---H
Confidence 876532211 1123468999999998765 68899999999999999999999999765432221111 0
Q ss_pred HHHhhCC------------hhHHhhhhcC-CCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HhcCC
Q 004155 642 ILKAQGN------------LMELVDKRLG-SNFD-----KEQVMVMINVALLCTDVSSTSRPSMSSVVS--MLEGR 697 (771)
Q Consensus 642 ~~~~~~~------------~~~~~d~~l~-~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~~ 697 (771)
....... ..+.+..... .... ......+.+++.+||+.||++|||+.|+++ .++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 312 (353)
T 2b9h_A 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTY 312 (353)
T ss_dssp HHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred HHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence 0000000 0011100000 0000 112346789999999999999999999987 45544
No 232
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=344.81 Aligned_cols=266 Identities=21% Similarity=0.321 Sum_probs=182.6
Q ss_pred cCCCC-CCccccCCceeEEEEEcC---CCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEe--CCEEEE
Q 004155 421 NNFAP-DNKIGEGGFGPVYKGHMA---DGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIE--GNQLLL 494 (771)
Q Consensus 421 ~~f~~-~~~lG~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 494 (771)
+.|.+ .++||+|+||.||+|... +++.||||++.... ....+.+|+.++++++||||+++++++.. ....++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 34555 558999999999999754 57899999997543 23568899999999999999999999965 678999
Q ss_pred EEEeccCCCHHHHhcCCC-----ccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEE----cCCCCeEE
Q 004155 495 IYEYMENNSLARALFGPE-----AHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLL----DKDLNPKI 565 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl 565 (771)
||||+++ +|.+++.... .....+++..++.|+.||+.||+|||+. +|+||||||+|||+ +.++.+||
T Consensus 98 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 9999975 8888774211 1223599999999999999999999998 89999999999999 77899999
Q ss_pred EeecCccccCCCCc--ccccccccCCCccchhhhccC-CCCchHhHHHHHHHHHHHHhCCCCCCCCCccc-------hhh
Q 004155 566 SDFGLAKLDEEDNT--HISTRVAGTFGYMAPEYAMRG-YLTDKADVYSFGIVALEIVSGRSNSSCKPKED-------IFY 635 (771)
Q Consensus 566 ~DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~-------~~~ 635 (771)
+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|++||.....+. ...
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 253 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence 99999987654322 122346799999999999874 58999999999999999999999997643321 001
Q ss_pred HHHHHHHHHhh--CChhH---------Hhhh---hcCCCCCH---------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 636 LLDWALILKAQ--GNLME---------LVDK---RLGSNFDK---------EQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 636 ~~~~~~~~~~~--~~~~~---------~~d~---~l~~~~~~---------~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
+......+... ..+.. .... ........ .....+.+|+.+||+.||++|||+.|+++
T Consensus 254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11111100000 00000 0000 00000000 01235789999999999999999999997
No 233
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.8e-37 Score=338.86 Aligned_cols=266 Identities=21% Similarity=0.295 Sum_probs=202.4
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCC-----------CCcEEeEEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMISALQ-----------HPNLVKLHGCCI 487 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~ 487 (771)
.++|.+.+.||+|+||.||+|. ..+|+.||||++... ......+.+|+.++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 3578899999999999999995 467899999999753 344567889999998886 899999999998
Q ss_pred eCC----EEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEc-----
Q 004155 488 EGN----QLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLD----- 558 (771)
Q Consensus 488 ~~~----~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~----- 558 (771)
..+ ..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+++ +|+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCC
Confidence 654 789999999 889999995432 245899999999999999999999863 799999999999994
Q ss_pred -CCCCeEEEeecCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchh---
Q 004155 559 -KDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIF--- 634 (771)
Q Consensus 559 -~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~--- 634 (771)
..+.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TTEEEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred cCcceEEEcccccccccCCCC----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 44589999999998665422 2346899999999999999999999999999999999999999764322111
Q ss_pred -hHHHHHHHHH-------hhCC----------------------hhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCC
Q 004155 635 -YLLDWALILK-------AQGN----------------------LMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSR 684 (771)
Q Consensus 635 -~~~~~~~~~~-------~~~~----------------------~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R 684 (771)
.+........ ..+. +...+.. ...++......+.+++.+||+.||++|
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R 325 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTE--KYKFSKDEAKEISDFLSPMLQLDPRKR 325 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHH--TTCCCHHHHHHHHHHHGGGGCSSTTTC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhh--cccCCcchHHHHHHHHHHHhccCcccc
Confidence 1111000000 0000 0111111 123456677889999999999999999
Q ss_pred CCHHHHHH--HhcCC
Q 004155 685 PSMSSVVS--MLEGR 697 (771)
Q Consensus 685 Ps~~evl~--~L~~~ 697 (771)
||+.|+++ .+.+.
T Consensus 326 pt~~ell~hp~f~~~ 340 (373)
T 1q8y_A 326 ADAGGLVNHPWLKDT 340 (373)
T ss_dssp BCHHHHHTCGGGTTC
T ss_pred CCHHHHhhChhhhcc
Confidence 99999987 44443
No 234
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.2e-37 Score=329.36 Aligned_cols=252 Identities=23% Similarity=0.340 Sum_probs=201.4
Q ss_pred HHhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEE
Q 004155 418 AATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLL 494 (771)
Q Consensus 418 ~~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 494 (771)
...++|++.+.||+|+||.||+|.. .+++.||||++... .......+.+|+.++++++||||+++++++.+.+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 3457899999999999999999955 47899999998653 23446789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCC---CCeEEEeecCc
Q 004155 495 IYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKD---LNPKISDFGLA 571 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~DFGla 571 (771)
||||+++++|.+++.. ...+++..++.++.||+.||+|||+. +++||||||+||+++.+ +.+||+|||++
T Consensus 99 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 99 VGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 9999999999998832 34689999999999999999999998 89999999999999754 47999999999
Q ss_pred cccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhH
Q 004155 572 KLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLME 651 (771)
Q Consensus 572 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (771)
+....... .....||+.|+|||.+.+ .++.++||||||+++|+|++|+.||......+.. . ... .+....
T Consensus 172 ~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~---~---~~~-~~~~~~ 241 (287)
T 2wei_A 172 TCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL---K---RVE-TGKYAF 241 (287)
T ss_dssp GTBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH---H---HHH-HCCCCC
T ss_pred eeecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHH---H---HHH-cCCCCC
Confidence 86644322 123458899999998875 4899999999999999999999999764332211 1 010 111000
Q ss_pred HhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 652 LVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 652 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.. +. .. .....+.+++.+||+.||++||++.|+++
T Consensus 242 ~~-~~-~~----~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 242 DL-PQ-WR----TISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CS-GG-GT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred Cc-hh-hh----hcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00 00 01 12345889999999999999999999987
No 235
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2e-37 Score=340.29 Aligned_cols=257 Identities=21% Similarity=0.336 Sum_probs=196.1
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEE----
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQL---- 492 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 492 (771)
.++|...+.||+|+||.||+|. ..+|+.||||++... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 4678889999999999999994 557999999999764 233457788999999999999999999999876654
Q ss_pred --EEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecC
Q 004155 493 --LLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 570 (771)
Q Consensus 493 --~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGl 570 (771)
++||||+. ++|.+++ ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 121 ~~~lv~e~~~-~~l~~~~------~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIM------GMEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCEEEEECCC-EEHHHHT------TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEEcccc-ccHHHHh------hcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999997 5898888 23489999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCcccccccccCCCccchhhhcc-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhh---
Q 004155 571 AKLDEEDNTHISTRVAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQ--- 646 (771)
Q Consensus 571 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~--- 646 (771)
++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+..... .......
T Consensus 191 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i--~~~~~~~~~~ 264 (371)
T 4exu_A 191 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI--LKVTGVPGTE 264 (371)
T ss_dssp C------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH--HHHHCCCCHH
T ss_pred ccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH--HHHhCCCcHH
Confidence 9865432 233568999999999987 68999999999999999999999999764432221111 0000000
Q ss_pred ------CC-hhHHhhhhcCC-CCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 647 ------GN-LMELVDKRLGS-NFD-----KEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 647 ------~~-~~~~~d~~l~~-~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.. ........... ... ......+.+++.+||+.||++|||+.|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 265 FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 00 00000000000 000 112356889999999999999999999986
No 236
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.9e-37 Score=347.59 Aligned_cols=252 Identities=24% Similarity=0.291 Sum_probs=188.0
Q ss_pred CCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeCCEEEEEEEecc
Q 004155 422 NFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISAL-QHPNLVKLHGCCIEGNQLLLIYEYME 500 (771)
Q Consensus 422 ~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~~ 500 (771)
.|...++||+|+||+||.+...+|+.||||++... ..+.+.+|+.+++++ +||||+++++++.+.+..++||||+.
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 44556889999999998776668999999998653 245678899999876 89999999999999999999999996
Q ss_pred CCCHHHHhcCCCccCCC---CChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCC-------------CCeE
Q 004155 501 NNSLARALFGPEAHRLK---LDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKD-------------LNPK 564 (771)
Q Consensus 501 ~gsL~~~l~~~~~~~~~---l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~-------------~~~k 564 (771)
|+|.+++......... .++..++.++.||+.||+|||+. +|+||||||+|||++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 6999999654322211 24456788999999999999998 89999999999999754 4899
Q ss_pred EEeecCccccCCCCcc---cccccccCCCccchhhhcc-------CCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccch
Q 004155 565 ISDFGLAKLDEEDNTH---ISTRVAGTFGYMAPEYAMR-------GYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDI 633 (771)
Q Consensus 565 l~DFGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~ 633 (771)
|+|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||........
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~ 248 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 248 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH
Confidence 9999999876553322 1234579999999999975 678999999999999999999 9999965332211
Q ss_pred hhHHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 634 FYLLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.. ....... +......+......+.+++.+||+.||++||++.||++
T Consensus 249 -~i------~~~~~~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 249 -NI------IRGIFSL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp -HH------HHTCCCC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HH------hcCCCCc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 00 0000000 01111123455678899999999999999999999985
No 237
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=8e-38 Score=334.71 Aligned_cols=244 Identities=24% Similarity=0.365 Sum_probs=190.6
Q ss_pred HHHHhcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCChh------cHHHHHHHHHHHHcC----CCCcEEeEEE
Q 004155 416 IKAATNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSKQ------GNREFVNEIGMISAL----QHPNLVKLHG 484 (771)
Q Consensus 416 l~~~~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l----~h~niv~l~~ 484 (771)
.....++|++.+.||+|+||.||+|.. .+|+.||||++...... ....+.+|+.++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 344567899999999999999999954 57899999999754321 223456789999888 8999999999
Q ss_pred EEEeCCEEEEEEEe-ccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEc-CCCC
Q 004155 485 CCIEGNQLLLIYEY-MENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLD-KDLN 562 (771)
Q Consensus 485 ~~~~~~~~~lV~E~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~-~~~~ 562 (771)
++...+..++|||| +.+++|.+++.. ...+++..++.++.||+.||+|||+. +|+||||||+||+++ .++.
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 178 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGC 178 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCe
Confidence 99999999999999 789999999943 34699999999999999999999998 899999999999999 8899
Q ss_pred eEEEeecCccccCCCCcccccccccCCCccchhhhccCCC-CchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHH
Q 004155 563 PKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWAL 641 (771)
Q Consensus 563 ~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~ 641 (771)
+||+|||+++...... .....||..|+|||++.+..+ +.++|||||||++|||++|+.||....
T Consensus 179 ~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------------ 243 (312)
T 2iwi_A 179 AKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------------ 243 (312)
T ss_dssp EEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------
T ss_pred EEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------------
Confidence 9999999998765432 234568999999999987665 459999999999999999999996310
Q ss_pred HHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 642 ILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 642 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
++.+... ..+......+.+++.+||+.||++||++.|+++
T Consensus 244 ---------~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 244 ---------EILEAEL--HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp ---------HHHHTCC--CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ---------HHhhhcc--CCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0111111 111223345788999999999999999999997
No 238
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=7.8e-37 Score=332.58 Aligned_cols=258 Identities=18% Similarity=0.275 Sum_probs=199.9
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCC-cEEEEEEcccCChhcHHHHHHHHHHHHcCCCCc------EEeEEEEEEeCCE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADG-TVVAVKQLSSKSKQGNREFVNEIGMISALQHPN------LVKLHGCCIEGNQ 491 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g-~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 491 (771)
.++|++.+.||+|+||.||+|.. .++ +.||+|+++.. ....+.+.+|+.++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 46899999999999999999954 344 78999999753 344567888999999987655 9999999999999
Q ss_pred EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEE--------------
Q 004155 492 LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLL-------------- 557 (771)
Q Consensus 492 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll-------------- 557 (771)
.++||||+ +++|.+++.... ...+++..++.++.||+.||+|||+. +|+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 170 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENN--FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKS 170 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred EEEEEecc-CCChHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccc
Confidence 99999999 567777774322 24689999999999999999999998 89999999999999
Q ss_pred -----cCCCCeEEEeecCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccc
Q 004155 558 -----DKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKED 632 (771)
Q Consensus 558 -----~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~ 632 (771)
+.++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||......+
T Consensus 171 ~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 246 (355)
T 2eu9_A 171 CEEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246 (355)
T ss_dssp CCEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 678899999999998654322 33568999999999999999999999999999999999999997654333
Q ss_pred hhhHHHHHHHHHhhCChhHH--------------------------hhhhc-----CCCCCHHHHHHHHHHHHHccCCCC
Q 004155 633 IFYLLDWALILKAQGNLMEL--------------------------VDKRL-----GSNFDKEQVMVMINVALLCTDVSS 681 (771)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~--------------------------~d~~l-----~~~~~~~~~~~l~~l~~~Cl~~dP 681 (771)
........ ... ..... +.... ...........+.+++.+||+.||
T Consensus 247 ~~~~~~~~---~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 322 (355)
T 2eu9_A 247 HLVMMEKI---LGP-IPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDP 322 (355)
T ss_dssp HHHHHHHH---HCC-CCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred HHHHHHHH---cCC-CcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCCh
Confidence 22111111 000 00000 00000 001122345678899999999999
Q ss_pred CCCCCHHHHHH
Q 004155 682 TSRPSMSSVVS 692 (771)
Q Consensus 682 ~~RPs~~evl~ 692 (771)
++|||+.|+++
T Consensus 323 ~~Rpt~~e~l~ 333 (355)
T 2eu9_A 323 AQRITLAEALL 333 (355)
T ss_dssp TTSCCHHHHTT
T ss_pred hhCcCHHHHhc
Confidence 99999999974
No 239
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.8e-37 Score=334.31 Aligned_cols=257 Identities=25% Similarity=0.347 Sum_probs=178.3
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC-hhcHHHHHHHHH-HHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS-KQGNREFVNEIG-MISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
.++|...+.||+|+||.||+|.. .+|+.||||++.... .....++..|+. +++.++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 36788899999999999999955 578999999997643 333455666666 677789999999999999999999999
Q ss_pred EeccCCCHHHHhcCC-CccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 497 EYMENNSLARALFGP-EAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 497 E~~~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
||+++ +|.+++... ......+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 99985 888877321 112357899999999999999999999862 79999999999999999999999999998664
Q ss_pred CCCcccccccccCCCccchhhh----ccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhH
Q 004155 576 EDNTHISTRVAGTFGYMAPEYA----MRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLME 651 (771)
Q Consensus 576 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (771)
.... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||......... ......
T Consensus 178 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-----------~~~~~~ 244 (327)
T 3aln_A 178 DSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ-----------LTQVVK 244 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------------CCCCC
T ss_pred cccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH-----------HHHHhc
Confidence 3322 2234689999999998 4567899999999999999999999999753211000 000000
Q ss_pred HhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 652 LVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 652 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
...+.+...........+.+++.+||+.||++||++.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 245 GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp SCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 00011111111123346889999999999999999999975
No 240
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=339.92 Aligned_cols=256 Identities=21% Similarity=0.330 Sum_probs=195.8
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCE-----
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQ----- 491 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 491 (771)
.++|...+.||+|+||.||+|. ..+|+.||||++... .....+.+.+|+.++++++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 4678889999999999999995 457999999998653 23345678999999999999999999999986643
Q ss_pred -EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecC
Q 004155 492 -LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGL 570 (771)
Q Consensus 492 -~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGl 570 (771)
.++||||+. ++|.+++. ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 599999997 58888772 3589999999999999999999998 899999999999999999999999999
Q ss_pred ccccCCCCcccccccccCCCccchhhhcc-CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCC-
Q 004155 571 AKLDEEDNTHISTRVAGTFGYMAPEYAMR-GYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGN- 648 (771)
Q Consensus 571 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~- 648 (771)
++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+.... .........
T Consensus 173 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~---i~~~~~~~~~ 245 (353)
T 3coi_A 173 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQ---ILKVTGVPGT 245 (353)
T ss_dssp TTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHH---HHHHHCBCCH
T ss_pred ccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHHhCCCCH
Confidence 9865432 233568999999999887 6789999999999999999999999976543222111 110000000
Q ss_pred ----------hhHHhhh---hcCC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 649 ----------LMELVDK---RLGS---NFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 649 ----------~~~~~d~---~l~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
....+.. .... .........+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 246 EFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000000 0000 111223456889999999999999999999986
No 241
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.5e-37 Score=334.84 Aligned_cols=258 Identities=20% Similarity=0.218 Sum_probs=174.6
Q ss_pred HhcCCCCCC-ccccCCceeEEEEEc-CCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEe----CCEE
Q 004155 419 ATNNFAPDN-KIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGCCIE----GNQL 492 (771)
Q Consensus 419 ~~~~f~~~~-~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 492 (771)
..++|.+.+ .||+|+||.||+|.. .+|+.||||++.... . ........++.++||||+++++++.. ....
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-K---ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-H---HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-H---HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 356788854 699999999999954 479999999986532 1 12222334566799999999999876 4568
Q ss_pred EEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcC---CCCeEEEeec
Q 004155 493 LLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDK---DLNPKISDFG 569 (771)
Q Consensus 493 ~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DFG 569 (771)
++||||+++|+|.+++.... ...+++.+++.++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERG--DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEEEeccCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 99999999999999996432 24699999999999999999999998 8999999999999976 4559999999
Q ss_pred CccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCCh
Q 004155 570 LAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNL 649 (771)
Q Consensus 570 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (771)
+++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||............. ..
T Consensus 177 ~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~~------- 244 (336)
T 3fhr_A 177 FAKETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMK--RR------- 244 (336)
T ss_dssp TCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------
T ss_pred cceeccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHH--Hh-------
Confidence 998654322 233568999999999988889999999999999999999999997543322110000 00
Q ss_pred hHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HhcCC
Q 004155 650 MELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS--MLEGR 697 (771)
Q Consensus 650 ~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~~ 697 (771)
...................+.+++.+||+.||++|||+.|+++ .+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 294 (336)
T 3fhr_A 245 IRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294 (336)
T ss_dssp ------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred hhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence 0000000001111123446889999999999999999999998 55554
No 242
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=9.7e-38 Score=335.64 Aligned_cols=243 Identities=22% Similarity=0.347 Sum_probs=197.9
Q ss_pred HHHhcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCChh------cHHHHHHHHHHHHcCC--CCcEEeEEEEEE
Q 004155 417 KAATNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQ------GNREFVNEIGMISALQ--HPNLVKLHGCCI 487 (771)
Q Consensus 417 ~~~~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~--h~niv~l~~~~~ 487 (771)
....++|++.+.||+|+||.||+|. ..+|+.||||++...... ....+.+|+.++++++ |+||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 3456789999999999999999995 567899999998654211 2245678999999996 599999999999
Q ss_pred eCCEEEEEEEeccC-CCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEc-CCCCeEE
Q 004155 488 EGNQLLLIYEYMEN-NSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLD-KDLNPKI 565 (771)
Q Consensus 488 ~~~~~~lV~E~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl 565 (771)
..+..++||||+.+ ++|.+++.. ...+++..++.++.||+.||+|||+. +|+||||||+|||++ +++.+||
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL 191 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKL 191 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEE
T ss_pred cCCcEEEEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEE
Confidence 99999999999976 899999932 35789999999999999999999998 899999999999999 7899999
Q ss_pred EeecCccccCCCCcccccccccCCCccchhhhccCCC-CchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHH
Q 004155 566 SDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYL-TDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILK 644 (771)
Q Consensus 566 ~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~ 644 (771)
+|||+++...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||....
T Consensus 192 ~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--------------- 253 (320)
T 3a99_A 192 IDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--------------- 253 (320)
T ss_dssp CCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---------------
T ss_pred eeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh---------------
Confidence 9999998765432 233568999999999987665 788999999999999999999995321
Q ss_pred hhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 645 AQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 645 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
+...... .........+.+++.+||+.||++||++.|+++
T Consensus 254 ------~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 254 ------EIIRGQV--FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ------HHHHCCC--CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------hhhcccc--cccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000000 011112345789999999999999999999987
No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.1e-37 Score=342.17 Aligned_cols=249 Identities=24% Similarity=0.298 Sum_probs=187.4
Q ss_pred hcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeCCEEEEEEEe
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISAL-QHPNLVKLHGCCIEGNQLLLIYEY 498 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~ 498 (771)
..+|...++||+|+||+||.....+|+.||||++...... .+.+|+.+++++ +||||+++++++.+.+..++||||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 3467888999999999976665567999999998654322 356799999999 799999999999999999999999
Q ss_pred ccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcC-----CCCeEEEeecCccc
Q 004155 499 MENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDK-----DLNPKISDFGLAKL 573 (771)
Q Consensus 499 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~DFGla~~ 573 (771)
+. |+|.+++.... ....+..++.++.||+.||+|||+. +|+||||||+|||++. ...+||+|||+++.
T Consensus 100 ~~-g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 100 CA-ATLQEYVEQKD---FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp CS-EEHHHHHHSSS---CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred CC-CCHHHHHHhcC---CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 96 59999995433 3455667889999999999999998 8999999999999943 34688999999987
Q ss_pred cCCCCc--ccccccccCCCccchhhhc---cCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccchhhHHHHHHHHHhhC
Q 004155 574 DEEDNT--HISTRVAGTFGYMAPEYAM---RGYLTDKADVYSFGIVALEIVS-GRSNSSCKPKEDIFYLLDWALILKAQG 647 (771)
Q Consensus 574 ~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~ksDV~S~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 647 (771)
...... .......||+.|+|||++. ...++.++|||||||++|||++ |+.||......... ......
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~-------~~~~~~ 245 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN-------ILLGAC 245 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH-------HHTTCC
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH-------HHhccC
Confidence 654322 1223467999999999997 4577889999999999999999 89998543221110 000000
Q ss_pred ChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 648 NLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 648 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.. .. ..........+.+++.+||+.||++||++.||++
T Consensus 246 ~~-----~~--~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 246 SL-----DC--LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp CC-----TT--SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred Cc-----cc--cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 00 00 0111234455789999999999999999999984
No 244
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=326.59 Aligned_cols=252 Identities=23% Similarity=0.345 Sum_probs=178.5
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCCh-hc-HHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKSK-QG-NREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 496 (771)
.++|+..+.||+|+||.||+|.. .+|+.||||++..... .. .+.+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 45688889999999999999955 4789999999976432 22 233445556788889999999999999999999999
Q ss_pred EeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCC
Q 004155 497 EYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEE 576 (771)
Q Consensus 497 E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~ 576 (771)
||+ ++.+..+... ....+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 104 e~~-~~~~~~l~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 104 ELM-GTCAEKLKKR---MQGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp CCC-SEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecc-CCcHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhhC--CEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 999 5566655521 2357899999999999999999999842 799999999999999999999999999976544
Q ss_pred CCcccccccccCCCccchhhhc-----cCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhH
Q 004155 577 DNTHISTRVAGTFGYMAPEYAM-----RGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLME 651 (771)
Q Consensus 577 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (771)
... .....||+.|+|||++. ...++.++|||||||++|||++|+.||........ ... ......
T Consensus 178 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~---~~~~~~---- 246 (318)
T 2dyl_A 178 DKA--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE--VLT---KVLQEE---- 246 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH--HHH---HHHHSC----
T ss_pred Ccc--ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH--HHH---HHhccC----
Confidence 322 23356899999999994 45788999999999999999999999975332111 110 011100
Q ss_pred HhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 652 LVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 652 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
.+.+.. .......+.+++.+||+.||.+||++.|+++
T Consensus 247 --~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 247 --PPLLPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp --CCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --CCCCCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 000100 0112345889999999999999999999976
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=9.6e-37 Score=352.33 Aligned_cols=259 Identities=25% Similarity=0.341 Sum_probs=197.7
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccC-ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEe------CCE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSK-SKQGNREFVNEIGMISALQHPNLVKLHGCCIE------GNQ 491 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 491 (771)
.++|++.++||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 36899999999999999999954 56899999998764 34456779999999999999999999998765 667
Q ss_pred EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCC---eEEEee
Q 004155 492 LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLN---PKISDF 568 (771)
Q Consensus 492 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~DF 568 (771)
.++||||+++|+|.+++..... ...+++..++.|+.|++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~-~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSC-TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEEeCCCCCHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 8999999999999999965432 23689999999999999999999998 8999999999999997765 999999
Q ss_pred cCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCC
Q 004155 569 GLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGN 648 (771)
Q Consensus 569 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 648 (771)
|+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..|.........
T Consensus 169 G~a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-----~~~~~~i~~~~~ 241 (676)
T 3qa8_A 169 GYAKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-----VQWHGKVREKSN 241 (676)
T ss_dssp CCCCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-----HHSSTTCC----
T ss_pred ccccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-----hhhhhhhhcccc
Confidence 99987654332 23457999999999999999999999999999999999999999653211 111000000000
Q ss_pred ----hhHHhhh------hc--CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 004155 649 ----LMELVDK------RL--GSNFDKEQVMVMINVALLCTDVSSTSRPSMSS 689 (771)
Q Consensus 649 ----~~~~~d~------~l--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~e 689 (771)
..+.... .+ ...........+.+++..||+.||++|||+.|
T Consensus 242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e 294 (676)
T 3qa8_A 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ 294 (676)
T ss_dssp --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence 0000000 00 11233446678999999999999999999977
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=9.2e-36 Score=314.88 Aligned_cols=233 Identities=12% Similarity=0.062 Sum_probs=183.2
Q ss_pred hcCCCCCCccccCCceeEEEEEc-CCCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEEE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHM-ADGTVVAVKQLSSKS---KQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 495 (771)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.++.+++||||+++++++.+.+..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 35788899999999999999955 458999999997653 23357899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|||+++++|.+++.. .....++.+|+.|++.||+|||++ +|+||||||+|||++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~------~~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------ 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADT------SPSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------ 174 (286)
T ss_dssp EECCCEEEHHHHHTT------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC------
T ss_pred EEecCCCCHHHHHhc------CCChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc------
Confidence 999999999999932 235567899999999999999998 89999999999999999999997443
Q ss_pred CCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhh
Q 004155 576 EDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDK 655 (771)
Q Consensus 576 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 655 (771)
|++| ++.++|||||||++|||+||+.||............. ....+.... ..
T Consensus 175 ---------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~----~~~~~~~~~--~~ 226 (286)
T 3uqc_A 175 ---------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE----RDTAGQPIE--PA 226 (286)
T ss_dssp ---------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC----BCTTSCBCC--HH
T ss_pred ---------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH----HHhccCCCC--hh
Confidence 4443 6899999999999999999999998654322110000 000000000 00
Q ss_pred hcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCCCCC
Q 004155 656 RLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVSMLEGRADV 700 (771)
Q Consensus 656 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 700 (771)
..... ....+.+++.+||+.||++| |+.|+++.|+.....
T Consensus 227 ~~~~~----~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 227 DIDRD----IPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp HHCTT----SCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred hcccC----CCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 11112 23458899999999999999 999999999886544
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.6e-36 Score=353.36 Aligned_cols=238 Identities=20% Similarity=0.274 Sum_probs=191.6
Q ss_pred hcCCCCCCccccCCceeEEEEEcC--CCcEEEEEEcccC-ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCE-----
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMA--DGTVVAVKQLSSK-SKQGNREFVNEIGMISALQHPNLVKLHGCCIEGNQ----- 491 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~--~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 491 (771)
.++|++.++||+|+||.||+|... +|+.||||++... .......+.+|+.++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 368999999999999999999654 6899999998654 33445678999999999999999999999987655
Q ss_pred EEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCc
Q 004155 492 LLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLA 571 (771)
Q Consensus 492 ~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla 571 (771)
.|+||||+++++|.+++. ..+++.+++.|+.||+.||+|||++ +|+||||||+|||++.+ .+||+|||++
T Consensus 159 ~~lv~E~~~g~~L~~~~~------~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKG------QKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp EEEEEECCCCEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred eEEEEEeCCCCcHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccc
Confidence 799999999999988772 2699999999999999999999998 89999999999999886 9999999999
Q ss_pred cccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhH
Q 004155 572 KLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLME 651 (771)
Q Consensus 572 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (771)
+..... ....||+.|+|||++.+.. +.++|||||||++|||++|.+|+.........
T Consensus 229 ~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~----------------- 285 (681)
T 2pzi_A 229 SRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGLP----------------- 285 (681)
T ss_dssp EETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSCC-----------------
T ss_pred hhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccccc-----------------
Confidence 876543 3356999999999987765 89999999999999999999887642111100
Q ss_pred HhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHhcC
Q 004155 652 LVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPS-MSSVVSMLEG 696 (771)
Q Consensus 652 ~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~L~~ 696 (771)
...........+.+++.+||+.||++||+ +.++...|.+
T Consensus 286 ------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 286 ------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp ------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred ------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 00000112346789999999999999995 5556555543
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.6e-34 Score=307.39 Aligned_cols=233 Identities=18% Similarity=0.248 Sum_probs=179.6
Q ss_pred hcCCCCC-CccccCCceeEEEEE-cCCCcEEEEEEcccCChhcHHHHHHHHHHH-HcCCCCcEEeEEEEEEe----CCEE
Q 004155 420 TNNFAPD-NKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSKQGNREFVNEIGMI-SALQHPNLVKLHGCCIE----GNQL 492 (771)
Q Consensus 420 ~~~f~~~-~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~ 492 (771)
.++|.+. +.||+|+||.||+|. ..+++.||+|++... ..+.+|+.++ +..+||||+++++++.. ....
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3556666 779999999999995 467899999998642 4567888888 55689999999999987 6788
Q ss_pred EEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcC---CCCeEEEeec
Q 004155 493 LLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDK---DLNPKISDFG 569 (771)
Q Consensus 493 ~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~DFG 569 (771)
++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 99999999999999995432 24699999999999999999999998 8999999999999998 7899999999
Q ss_pred CccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCCh
Q 004155 570 LAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNL 649 (771)
Q Consensus 570 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (771)
+++.... ..++.++|||||||++|||++|+.||......... . ..
T Consensus 166 ~a~~~~~-----------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-----------~-~~ 210 (299)
T 3m2w_A 166 FAKETTG-----------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-----------P-GM 210 (299)
T ss_dssp TCEECTT-----------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------C-CS
T ss_pred ccccccc-----------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-----------H-HH
Confidence 9874321 34578999999999999999999999653321110 0 00
Q ss_pred hHHhhhhcCCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH--HhcCCC
Q 004155 650 MELVDKRLGSNFDK----EQVMVMINVALLCTDVSSTSRPSMSSVVS--MLEGRA 698 (771)
Q Consensus 650 ~~~~d~~l~~~~~~----~~~~~l~~l~~~Cl~~dP~~RPs~~evl~--~L~~~~ 698 (771)
...+... ....+. .....+.+++.+||+.||++||++.|+++ .+.+..
T Consensus 211 ~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~ 264 (299)
T 3m2w_A 211 KTRIRMG-QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264 (299)
T ss_dssp CCSSCTT-CCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred HHHHhhc-cccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence 0000000 001111 12346889999999999999999999997 455543
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-35 Score=330.91 Aligned_cols=243 Identities=14% Similarity=0.125 Sum_probs=181.3
Q ss_pred hcCCCCCCccccCCceeEEEEE-cCCCcEEEEEEcccCCh---hcHHHHHHHHHHHHcCCC-Cc---------------E
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGH-MADGTVVAVKQLSSKSK---QGNREFVNEIGMISALQH-PN---------------L 479 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h-~n---------------i 479 (771)
+.+|...++||+|+||.||+|. ..+|+.||||++..... ...+.+.+|+.+++.++| +| +
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 3456778899999999999996 66799999999874322 235678999999999977 21 1
Q ss_pred Ee------EEEEEEe-----CCEEEEEEEeccCCCHHHHhcCC---CccCCCCChHHHHHHHHHHHHHHHHhhhcCCCce
Q 004155 480 VK------LHGCCIE-----GNQLLLIYEYMENNSLARALFGP---EAHRLKLDWPTRHRICVGIARGLAYLHEESRLKI 545 (771)
Q Consensus 480 v~------l~~~~~~-----~~~~~lV~E~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~i 545 (771)
+. +..++.. ....+++|+++ +++|.+++... ......+++..++.|+.||+.||+|||++ +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 11 1111111 22467777766 67999888311 11234688999999999999999999998 89
Q ss_pred eccCCCCCcEEEcCCCCeEEEeecCccccCCCCcccccccccCCCccchhhh----------ccCCCCchHhHHHHHHHH
Q 004155 546 VHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYA----------MRGYLTDKADVYSFGIVA 615 (771)
Q Consensus 546 vH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~ksDV~S~Gvil 615 (771)
+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 99999999999999999999999999865432 234567 999999999 555688999999999999
Q ss_pred HHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhcCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 004155 616 LEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRLGSNFDKEQVMVMINVALLCTDVSSTSRPSMSSVVS 692 (771)
Q Consensus 616 ~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 692 (771)
|||++|+.||......... ..++.. ....+ ..+.+++.+||+.||++||++.|+++
T Consensus 308 ~elltg~~Pf~~~~~~~~~---------------~~~~~~--~~~~~----~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGGS---------------EWIFRS--CKNIP----QPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHHSSCCCCTTGGGSCS---------------GGGGSS--CCCCC----HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHCCCCCCCcchhhhH---------------HHHHhh--cccCC----HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9999999999754322211 111111 01222 45889999999999999999988864
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.8e-35 Score=320.10 Aligned_cols=237 Identities=20% Similarity=0.211 Sum_probs=183.5
Q ss_pred hcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCC--------hhcHHHHHHHHHHHHcCC---------CCcEEeE
Q 004155 420 TNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKS--------KQGNREFVNEIGMISALQ---------HPNLVKL 482 (771)
Q Consensus 420 ~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~l 482 (771)
.++|++.++||+|+||.||+|.. +|+.||||++.... ....+.+.+|+.++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35688899999999999999977 68999999997542 223477889999988885 8888888
Q ss_pred EEEEE------------------------------eCCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHH
Q 004155 483 HGCCI------------------------------EGNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIAR 532 (771)
Q Consensus 483 ~~~~~------------------------------~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~ 532 (771)
.+.+. ..+..++||||+++|++.+.+. ...+++..+..|+.||+.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~-----~~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR-----TKLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT-----TTCCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH-----hcCCCHHHHHHHHHHHHH
Confidence 77653 2678999999999997666662 246899999999999999
Q ss_pred HHHHhh-hcCCCceeccCCCCCcEEEcCCC--------------------CeEEEeecCccccCCCCcccccccccCCCc
Q 004155 533 GLAYLH-EESRLKIVHRDIKATNVLLDKDL--------------------NPKISDFGLAKLDEEDNTHISTRVAGTFGY 591 (771)
Q Consensus 533 aL~~LH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~gt~~y 591 (771)
||+||| +. +|+||||||+|||++.++ .+||+|||+|+..... ...||+.|
T Consensus 173 aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y 243 (336)
T 2vuw_A 173 SLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVS 243 (336)
T ss_dssp HHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCT
T ss_pred HHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecc
Confidence 999999 77 899999999999999887 8999999999866432 24699999
Q ss_pred cchhhhccCCCCchHhHHHHHHH-HHHHHhCCCCCCCCCccchhhHHHHHHHHHhhCChhHHhhhhc-CCC----CCHHH
Q 004155 592 MAPEYAMRGYLTDKADVYSFGIV-ALEIVSGRSNSSCKPKEDIFYLLDWALILKAQGNLMELVDKRL-GSN----FDKEQ 665 (771)
Q Consensus 592 ~aPE~~~~~~~~~ksDV~S~Gvi-l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l-~~~----~~~~~ 665 (771)
+|||++.+.. +.++||||+|++ .+++++|..||.. ..|..... ..+..... ... .....
T Consensus 244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~---------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 308 (336)
T 2vuw_A 244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN---------VLWLHYLT-----DKMLKQMTFKTKCNTPAMKQI 308 (336)
T ss_dssp TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH---------HHHHHHHH-----HHHHHTCCCSSCCCSHHHHHH
T ss_pred cChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc---------hhhhhHHH-----HhhhhhhccCcccchhhhhhc
Confidence 9999998766 899999998777 7888999988731 11111100 01111100 011 12245
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHH
Q 004155 666 VMVMINVALLCTDVSSTSRPSMSSVV 691 (771)
Q Consensus 666 ~~~l~~l~~~Cl~~dP~~RPs~~evl 691 (771)
...+.+++.+||+.| |+.|++
T Consensus 309 s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 309 KRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHHHHGGGSS-----SHHHHH
T ss_pred CHHHHHHHHHHhccC-----CHHHHH
Confidence 668999999999976 898887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=4.4e-29 Score=287.74 Aligned_cols=185 Identities=17% Similarity=0.139 Sum_probs=129.7
Q ss_pred ccccCCceeEEEE-EcCCCcEEEEEEcccCC----------hhcHHHHHHHHHHHHcC-CCCcEEeEEEEEEeCCEEEEE
Q 004155 428 KIGEGGFGPVYKG-HMADGTVVAVKQLSSKS----------KQGNREFVNEIGMISAL-QHPNLVKLHGCCIEGNQLLLI 495 (771)
Q Consensus 428 ~lG~G~~g~Vy~~-~~~~g~~vavK~l~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 495 (771)
..+.|+.|.+..+ +.-.|+.||+|++.... ....++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 3556666666554 33358889999986541 22346799999999999 699999999999999999999
Q ss_pred EEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 496 YEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 496 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
|||++|++|.++|.. ..+++.. +|+.||+.||+|+|++ |||||||||+|||+++++++||+|||+|+...
T Consensus 321 MEyv~G~~L~d~i~~----~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA----GEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EECCCSEEHHHHHHT----TCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EecCCCCcHHHHHHh----CCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 999999999999943 2345543 5899999999999999 89999999999999999999999999998765
Q ss_pred CCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCC
Q 004155 576 EDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSN 624 (771)
Q Consensus 576 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p 624 (771)
..... .....||++|+|||++.+ .+..++|+||+|++++++.+|..+
T Consensus 391 ~~~~~-~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 391 QDCSW-PTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ---CC-SHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCcc-ccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 44332 234679999999999875 467789999999998887666443
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=3.1e-26 Score=262.53 Aligned_cols=186 Identities=17% Similarity=0.198 Sum_probs=147.1
Q ss_pred CCCCCccccCCceeEEEEEcCCCcEEEEEEcccCCh--------hcHHHHHHHHHHHHcCCCCcEEeEEEEEEeCCEEEE
Q 004155 423 FAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSK--------QGNREFVNEIGMISALQHPNLVKLHGCCIEGNQLLL 494 (771)
Q Consensus 423 f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 494 (771)
+...++||+|+||.||+|.. .++.+|+|+...... ...+.+.+|++++++++||||+++..++...+..++
T Consensus 338 ~~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 416 (540)
T 3en9_A 338 KIPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI 416 (540)
T ss_dssp ----------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred CCCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence 34567999999999999955 578899998644321 113458999999999999999977777777788899
Q ss_pred EEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCcccc
Q 004155 495 IYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 574 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~ 574 (771)
||||+++++|.+++.. +..++.|++.||+|||++ +|+||||||+|||++. ++||+|||+++..
T Consensus 417 VmE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 417 MMSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp EEECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred EEECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 9999999999999933 568999999999999998 8999999999999998 9999999999977
Q ss_pred CCCCccc------ccccccCCCccchhhhcc--CCCCchHhHHHHHHHHHHHHhCCCCCC
Q 004155 575 EEDNTHI------STRVAGTFGYMAPEYAMR--GYLTDKADVYSFGIVALEIVSGRSNSS 626 (771)
Q Consensus 575 ~~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~ksDV~S~Gvil~elltG~~p~~ 626 (771)
....... .....||+.|+|||++.. ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 5532221 234679999999999986 567888999999999999888877663
No 253
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.91 E-value=2.7e-24 Score=258.01 Aligned_cols=178 Identities=26% Similarity=0.382 Sum_probs=124.0
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
+++|+.|+|++|++++.+|..+..+++|++|+|++|++++.+|..+.++++|++|+|++|++++..|..++++++|++|+
T Consensus 441 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 520 (768)
T 3rgz_A 441 LSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILK 520 (768)
T ss_dssp CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEE
T ss_pred CCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEE
Confidence 46677777777777777777777777777777777777777777777777777777777777776666777777777777
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCcccc-----------------------------------------
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFM----------------------------------------- 120 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~----------------------------------------- 120 (771)
|++|+++|.+|..++.+++|+.|+|++|+++|.+|..+.
T Consensus 521 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (768)
T 3rgz_A 521 LSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIR 600 (768)
T ss_dssp CCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCC
T ss_pred CCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccccccccccc
Confidence 777777777777777777777777777766666664332
Q ss_pred -----------------------------CCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCccccCCCccccccc
Q 004155 121 -----------------------------GLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFTAGSSETSCQYR 169 (771)
Q Consensus 121 -----------------------------~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~~~~p~~~~~l~ 169 (771)
.+++|+.|+|++|+|+|.+|..+ ++.|+.|+|++|+++|.+|+.+++++
T Consensus 601 ~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~ 680 (768)
T 3rgz_A 601 SEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLR 680 (768)
T ss_dssp GGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT
T ss_pred chhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCC
Confidence 23456667777777776676666 66666777777777777777777777
Q ss_pred ccceeccCCC
Q 004155 170 SVNLFASSSK 179 (771)
Q Consensus 170 ~L~~l~~s~~ 179 (771)
+|+.|++++|
T Consensus 681 ~L~~LdLs~N 690 (768)
T 3rgz_A 681 GLNILDLSSN 690 (768)
T ss_dssp TCCEEECCSS
T ss_pred CCCEEECCCC
Confidence 7777666644
No 254
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.90 E-value=2.7e-24 Score=229.94 Aligned_cols=177 Identities=23% Similarity=0.360 Sum_probs=153.0
Q ss_pred CCCCcEEEccC-CcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEE
Q 004155 2 LVTLKDFRISD-NHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTL 80 (771)
Q Consensus 2 L~~L~~L~Ls~-N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 80 (771)
|++|++|+|++ |++++.+|..|+++++|++|+|++|++++.+|..|.++++|++|+|++|++++..|..|.++++|++|
T Consensus 75 l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 154 (313)
T 1ogq_A 75 LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGI 154 (313)
T ss_dssp CTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEE
T ss_pred CCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeE
Confidence 67899999995 89998999999999999999999999998899999999999999999999998888889999999999
Q ss_pred EccCCcCcccCChhhhcCC-CCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCcc
Q 004155 81 ILRSCNVSGKLPDYLGLMT-SLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSF 157 (771)
Q Consensus 81 ~Ls~N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l 157 (771)
+|++|+++|.+|..++.++ +|+.|+|++|++++.+|..+..++ |+.|+|++|++++.+|..+ +++|+.|+|++|.+
T Consensus 155 ~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 233 (313)
T 1ogq_A 155 TFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSL 233 (313)
T ss_dssp ECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEE
T ss_pred ECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCce
Confidence 9999999989999999888 899999999999888888888886 8888888888887777766 77888888888888
Q ss_pred ccCCCcccccccccceeccCCCC
Q 004155 158 TAGSSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 158 ~~~~p~~~~~l~~L~~l~~s~~~ 180 (771)
++.+|. +..+++|+.|+++.|.
T Consensus 234 ~~~~~~-~~~l~~L~~L~Ls~N~ 255 (313)
T 1ogq_A 234 AFDLGK-VGLSKNLNGLDLRNNR 255 (313)
T ss_dssp CCBGGG-CCCCTTCCEEECCSSC
T ss_pred eeecCc-ccccCCCCEEECcCCc
Confidence 876665 6777888888877553
No 255
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.90 E-value=5e-24 Score=227.90 Aligned_cols=178 Identities=27% Similarity=0.344 Sum_probs=169.1
Q ss_pred CCCcEEEccCCcccc--cCCccccCCCcCCEEEccc-CCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcE
Q 004155 3 VTLKDFRISDNHFTG--KIPNFIQNWTLLEKLVIQA-SGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKT 79 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~--~ip~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 79 (771)
.+++.|+|++|+++| .+|..|+++++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++..|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 579999999999999 8999999999999999995 9999999999999999999999999999888899999999999
Q ss_pred EEccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCC-CCcEEEcCCCcccccCchhh-hhcCCeecccCCcc
Q 004155 80 LILRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLL-DVDYIYLTGNLLTGTIPPWM-LQKGDRVDLSYNSF 157 (771)
Q Consensus 80 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~-~L~~L~Ls~N~l~g~iP~~~-~~~L~~l~ls~N~l 157 (771)
|+|++|++++.+|..+..+++|++|+|++|+++|.+|..+..++ +|++|+|++|+++|.+|..+ ...|+.|+|++|.+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l 209 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNML 209 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcc
Confidence 99999999999999999999999999999999999999999998 99999999999999999888 33499999999999
Q ss_pred ccCCCcccccccccceeccCCCC
Q 004155 158 TAGSSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 158 ~~~~p~~~~~l~~L~~l~~s~~~ 180 (771)
++.+|..+..+++|+.|+++.+.
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~ 232 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNS 232 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSE
T ss_pred cCcCCHHHhcCCCCCEEECCCCc
Confidence 99999999999999999987653
No 256
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.90 E-value=2.8e-23 Score=249.15 Aligned_cols=179 Identities=22% Similarity=0.309 Sum_probs=164.9
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
+++|+.|+|++|++++.+|..++++++|++|+|++|++++.+|..+..+++|+.|+|++|++++..|..+.++++|++|+
T Consensus 417 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 496 (768)
T 3rgz_A 417 CSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWIS 496 (768)
T ss_dssp CTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEE
T ss_pred CCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEE
Confidence 67899999999999999999999999999999999999999999999999999999999999998888999999999999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh------------------
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM------------------ 143 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~------------------ 143 (771)
|++|++++.+|..++.+++|++|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|..+
T Consensus 497 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~ 576 (768)
T 3rgz_A 497 LSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYV 576 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEE
T ss_pred ccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccc
Confidence 99999999999999999999999999999999999999999999999999999999888754
Q ss_pred ------------------------------------------------------hhcCCeecccCCccccCCCccccccc
Q 004155 144 ------------------------------------------------------LQKGDRVDLSYNSFTAGSSETSCQYR 169 (771)
Q Consensus 144 ------------------------------------------------------~~~L~~l~ls~N~l~~~~p~~~~~l~ 169 (771)
++.|+.|||++|+++|.+|..+.+++
T Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~ 656 (768)
T 3rgz_A 577 YIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMP 656 (768)
T ss_dssp EEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCT
T ss_pred ccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccc
Confidence 14577899999999999999999999
Q ss_pred ccceeccCCCC
Q 004155 170 SVNLFASSSKG 180 (771)
Q Consensus 170 ~L~~l~~s~~~ 180 (771)
.|+.|+++.|.
T Consensus 657 ~L~~L~Ls~N~ 667 (768)
T 3rgz_A 657 YLFILNLGHND 667 (768)
T ss_dssp TCCEEECCSSC
T ss_pred cCCEEeCcCCc
Confidence 99999988653
No 257
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.89 E-value=2.5e-23 Score=223.90 Aligned_cols=172 Identities=15% Similarity=0.272 Sum_probs=109.9
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEc
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLIL 82 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 82 (771)
++|+.|+|++|+|+ .+|..++++++|++|+|++|.|+ .+|..++.+++|++|+|++|+++. .|..+.++++|++|+|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~-lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRA-LPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCC-CCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCcccc-CcHHHhcCcCCCEEEC
Confidence 45666666666666 66666666666666666666666 666666666666666666666663 3455666666666666
Q ss_pred cCCcCcccCChhhhc---------CCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeec
Q 004155 83 RSCNVSGKLPDYLGL---------MTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVD 151 (771)
Q Consensus 83 s~N~l~g~~p~~~~~---------l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ 151 (771)
++|++.+.+|..++. +++|++|+|++|+|+ .+|..++.+++|++|+|++|+++ .+|..+ +++|+.|+
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~ 235 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELD 235 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEE
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEE
Confidence 666666666665543 666666666666666 66666666666666666666666 344444 55666666
Q ss_pred ccCCccccCCCcccccccccceeccCCC
Q 004155 152 LSYNSFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 152 ls~N~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
|++|++.+.+|..+..+++|+.|+++.+
T Consensus 236 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n 263 (328)
T 4fcg_A 236 LRGCTALRNYPPIFGGRAPLKRLILKDC 263 (328)
T ss_dssp CTTCTTCCBCCCCTTCCCCCCEEECTTC
T ss_pred CcCCcchhhhHHHhcCCCCCCEEECCCC
Confidence 6666666666666666666666666543
No 258
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.89 E-value=4e-23 Score=222.29 Aligned_cols=175 Identities=21% Similarity=0.260 Sum_probs=163.8
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccC--------
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDK-------- 73 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-------- 73 (771)
|++|++|+|++|+|+ .+|..++++++|++|+|++|+|+ .+|..|++|++|++|+|++|++.+..|..+..
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~ 180 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEE
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhc
Confidence 678999999999999 99999999999999999999999 89999999999999999999998888877664
Q ss_pred -CCCCcEEEccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCee
Q 004155 74 -MKKMKTLILRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRV 150 (771)
Q Consensus 74 -l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l 150 (771)
+++|++|+|++|+|+ .+|..++.+++|++|+|++|+++ .+|..+..+++|++|+|++|++.+.+|..+ +++|+.|
T Consensus 181 ~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L 258 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRL 258 (328)
T ss_dssp ESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEE
T ss_pred cCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEE
Confidence 999999999999999 99999999999999999999999 577789999999999999999999999887 8899999
Q ss_pred cccCCccccCCCcccccccccceeccCCCC
Q 004155 151 DLSYNSFTAGSSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 151 ~ls~N~l~~~~p~~~~~l~~L~~l~~s~~~ 180 (771)
+|++|++.+.+|..+..+++|+.|+++.+.
T Consensus 259 ~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~ 288 (328)
T 4fcg_A 259 ILKDCSNLLTLPLDIHRLTQLEKLDLRGCV 288 (328)
T ss_dssp ECTTCTTCCBCCTTGGGCTTCCEEECTTCT
T ss_pred ECCCCCchhhcchhhhcCCCCCEEeCCCCC
Confidence 999999999999999999999999988653
No 259
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.88 E-value=2.5e-22 Score=211.54 Aligned_cols=178 Identities=16% Similarity=0.151 Sum_probs=157.9
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCC-CCCCCCCCccCCCCCcEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLN-GTEAPFPPLDKMKKMKTL 80 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L 80 (771)
.++|+.|+|++|+|++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|. +....+..|..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 4679999999999996666789999999999999999998889999999999999999997 888778889999999999
Q ss_pred EccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCccc
Q 004155 81 ILRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFT 158 (771)
Q Consensus 81 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~ 158 (771)
+|++|++++..|..+..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..+ +++|+.|+|++|.++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 999999997778889999999999999999996666678999999999999999995444445 789999999999999
Q ss_pred cCCCcccccccccceeccCCC
Q 004155 159 AGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 159 ~~~p~~~~~l~~L~~l~~s~~ 179 (771)
+..|..+..+++|+.|+++.+
T Consensus 191 ~~~~~~~~~l~~L~~L~l~~n 211 (285)
T 1ozn_A 191 HVHPHAFRDLGRLMTLYLFAN 211 (285)
T ss_dssp EECTTTTTTCTTCCEEECCSS
T ss_pred ccCHhHccCcccccEeeCCCC
Confidence 998999999999999998765
No 260
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.88 E-value=5.8e-22 Score=208.74 Aligned_cols=176 Identities=18% Similarity=0.171 Sum_probs=99.4
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCC-ccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASG-LVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTL 80 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 80 (771)
+++|++|+|++|+|++..|..|.++++|++|+|++|+ ++...|..|..+++|++|+|++|++++.++..|.++++|++|
T Consensus 55 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 134 (285)
T 1ozn_A 55 CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134 (285)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE
Confidence 3455666666666654445555556666666666664 443335555556666666666666655555555556666666
Q ss_pred EccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCccc
Q 004155 81 ILRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFT 158 (771)
Q Consensus 81 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~ 158 (771)
+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..+ +++|+.|+|++|+++
T Consensus 135 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 214 (285)
T 1ozn_A 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 214 (285)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred ECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCC
Confidence 666666654333445555666666666666653333345555666666666666655445444 455566666666665
Q ss_pred cCCCcccccccccceeccC
Q 004155 159 AGSSETSCQYRSVNLFASS 177 (771)
Q Consensus 159 ~~~p~~~~~l~~L~~l~~s 177 (771)
+..+..+..+++|+.++++
T Consensus 215 ~~~~~~~~~l~~L~~L~l~ 233 (285)
T 1ozn_A 215 ALPTEALAPLRALQYLRLN 233 (285)
T ss_dssp CCCHHHHTTCTTCCEEECC
T ss_pred cCCHHHcccCcccCEEecc
Confidence 5544555555555555554
No 261
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.88 E-value=1.1e-21 Score=205.11 Aligned_cols=176 Identities=16% Similarity=0.184 Sum_probs=124.4
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEc
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLIL 82 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 82 (771)
++|+.|+|++|+|++..+..|.++++|++|+|++|+|+...+..|..+++|++|+|++|+++..++..|.++++|++|+|
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 45777777777777444446777777777777777777444445667777777777777777777667777777777777
Q ss_pred cCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCccccC
Q 004155 83 RSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFTAG 160 (771)
Q Consensus 83 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~~~ 160 (771)
++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..|..+ +++|+.|+|++|++++.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRV 196 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcC
Confidence 7777776556667777777777777777775444457777777777777777774333334 56777777777777766
Q ss_pred CCcccccccccceeccCC
Q 004155 161 SSETSCQYRSVNLFASSS 178 (771)
Q Consensus 161 ~p~~~~~l~~L~~l~~s~ 178 (771)
.+..+..+++|+.++++.
T Consensus 197 ~~~~~~~l~~L~~L~l~~ 214 (270)
T 2o6q_A 197 PEGAFDSLEKLKMLQLQE 214 (270)
T ss_dssp CTTTTTTCTTCCEEECCS
T ss_pred CHHHhccccCCCEEEecC
Confidence 666677777777777653
No 262
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=4.3e-23 Score=216.92 Aligned_cols=151 Identities=19% Similarity=0.094 Sum_probs=121.2
Q ss_pred HHHHHhcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCCh------------------hcHHHHHHHHHHHHcCCC
Q 004155 415 QIKAATNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSK------------------QGNREFVNEIGMISALQH 476 (771)
Q Consensus 415 ~l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~------------------~~~~~~~~E~~~l~~l~h 476 (771)
.+......|.+.+.||+|+||.||+|...+|+.||||+++.... .....+.+|+.++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 33444456667799999999999999777899999999864321 13457899999999998
Q ss_pred CcEEeEEEEEEeCCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEE
Q 004155 477 PNLVKLHGCCIEGNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVL 556 (771)
Q Consensus 477 ~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIl 556 (771)
| +++.+++.. +..++||||+++|+|.+ +. ......++.|++.||+|||+. +|+||||||+|||
T Consensus 163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~----------~~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NIL 225 (282)
T 1zar_A 163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR-VR----------VENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVL 225 (282)
T ss_dssp -T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CC----------CSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEE
T ss_pred -C-CCcCeEEec-cceEEEEEecCCCcHHH-cc----------hhhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEE
Confidence 4 666665544 45699999999999988 51 123557999999999999998 8999999999999
Q ss_pred EcCCCCeEEEeecCccccCCCCcccccccccCCCccchhhhc
Q 004155 557 LDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAM 598 (771)
Q Consensus 557 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 598 (771)
++ ++.+||+|||+|+. +..|+|||++.
T Consensus 226 l~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 226 VS-EEGIWIIDFPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp EE-TTEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred EE-CCcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence 99 99999999999973 33578999874
No 263
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=1.4e-21 Score=201.91 Aligned_cols=173 Identities=18% Similarity=0.149 Sum_probs=154.8
Q ss_pred CCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEcc
Q 004155 4 TLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILR 83 (771)
Q Consensus 4 ~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 83 (771)
+.+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|++++.++..|.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4678999999999 8998776 689999999999998888899999999999999999999988889999999999999
Q ss_pred CCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCccccCC
Q 004155 84 SCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFTAGS 161 (771)
Q Consensus 84 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~~~~ 161 (771)
+|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..|..+ +++|+.|+|++|++++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 999997667788999999999999999996666668999999999999999995544455 789999999999999888
Q ss_pred CcccccccccceeccCCC
Q 004155 162 SETSCQYRSVNLFASSSK 179 (771)
Q Consensus 162 p~~~~~l~~L~~l~~s~~ 179 (771)
+..+..+++|+.++++.|
T Consensus 172 ~~~~~~l~~L~~L~l~~N 189 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGN 189 (251)
T ss_dssp TTTTTTCTTCCEEECCSC
T ss_pred HHHHhCCCCCCEEEeeCC
Confidence 888999999999988644
No 264
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=3.2e-21 Score=199.23 Aligned_cols=160 Identities=17% Similarity=0.185 Sum_probs=145.7
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEc
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLIL 82 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 82 (771)
++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|++++.++..|..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 57999999999999777788999999999999999999888888999999999999999999999889999999999999
Q ss_pred cCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCccccC
Q 004155 83 RSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFTAG 160 (771)
Q Consensus 83 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~~~ 160 (771)
++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..+ +++|+.|+|++|++++.
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999996666668999999999999999997666689999999999999999996555555 78999999999999976
Q ss_pred CC
Q 004155 161 SS 162 (771)
Q Consensus 161 ~p 162 (771)
..
T Consensus 195 ~~ 196 (251)
T 3m19_A 195 RC 196 (251)
T ss_dssp ST
T ss_pred cc
Confidence 33
No 265
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.86 E-value=3.2e-21 Score=201.74 Aligned_cols=174 Identities=18% Similarity=0.200 Sum_probs=156.4
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
+++|+.|++++|.++ .++. +..+++|++|+|++|++++ + ..+..+++|++|+|++|++++.++..|.++++|++|+
T Consensus 40 l~~L~~L~l~~~~i~-~~~~-l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 115 (272)
T 3rfs_A 40 LNSIDQIIANNSDIK-SVQG-IQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV 115 (272)
T ss_dssp HTTCCEEECTTSCCC-CCTT-GGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccceeeeeeCCCCcc-cccc-cccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE
Confidence 468999999999998 6654 8899999999999999985 4 4789999999999999999999888899999999999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCcccc
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFTA 159 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~~ 159 (771)
|++|++++..|..|+.+++|++|+|++|++++..|..|..+++|+.|+|++|++++..|..+ +++|+.|+|++|++++
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCc
Confidence 99999997777778999999999999999997777778999999999999999996555544 7899999999999999
Q ss_pred CCCcccccccccceeccCCC
Q 004155 160 GSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 160 ~~p~~~~~l~~L~~l~~s~~ 179 (771)
..|..+..+++|+.++++.|
T Consensus 196 ~~~~~~~~l~~L~~L~l~~N 215 (272)
T 3rfs_A 196 VPDGVFDRLTSLQYIWLHDN 215 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSS
T ss_pred cCHHHHhCCcCCCEEEccCC
Confidence 88888999999999998754
No 266
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.86 E-value=1.4e-21 Score=207.91 Aligned_cols=177 Identities=18% Similarity=0.211 Sum_probs=132.7
Q ss_pred CCCCcEEEccCCccc--ccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCC-CCccCCCCCc
Q 004155 2 LVTLKDFRISDNHFT--GKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPF-PPLDKMKKMK 78 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~--~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~ 78 (771)
+++|+.|+|++|+++ +.+|..+..+++|++|+|++|.++ .+|..+..+++|+.|+|++|++++.++ ..+..+++|+
T Consensus 51 l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 129 (306)
T 2z66_A 51 LTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 129 (306)
T ss_dssp CTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCC
T ss_pred cccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCC
Confidence 567888888888877 223566667778888888888877 567777778888888888887777665 5677778888
Q ss_pred EEEccCCcCcccCChhhhcCCCCcEEEccCCCCCC-CCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCC
Q 004155 79 TLILRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNG-AIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYN 155 (771)
Q Consensus 79 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N 155 (771)
+|+|++|++.+..|..+..+++|+.|+|++|.+++ .+|..+..+++|++|+|++|++++..|..+ +++|+.|+|++|
T Consensus 130 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N 209 (306)
T 2z66_A 130 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 209 (306)
T ss_dssp EEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred EEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCC
Confidence 88888888777777777777888888888887775 467777777788888888888776556555 677778888888
Q ss_pred ccccCCCcccccccccceeccCCC
Q 004155 156 SFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 156 ~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
++++..+..+..+++|+.|+++.|
T Consensus 210 ~l~~~~~~~~~~l~~L~~L~L~~N 233 (306)
T 2z66_A 210 NFFSLDTFPYKCLNSLQVLDYSLN 233 (306)
T ss_dssp CCSBCCSGGGTTCTTCCEEECTTS
T ss_pred ccCccChhhccCcccCCEeECCCC
Confidence 877776667777777777777655
No 267
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.85 E-value=1.8e-21 Score=204.05 Aligned_cols=177 Identities=16% Similarity=0.174 Sum_probs=152.2
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEc
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLIL 82 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 82 (771)
++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++.++..|.++++|++|+|
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 46999999999999666668999999999999999999777778999999999999999999998889999999999999
Q ss_pred cCCcCcccCChhhhcCCCCcEEEccCCCCCC-CCCccccCCCCCcEEEcCCCcccccCchhh--hhcCC----eecccCC
Q 004155 83 RSCNVSGKLPDYLGLMTSLKVLDVSFNKLNG-AIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGD----RVDLSYN 155 (771)
Q Consensus 83 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~----~l~ls~N 155 (771)
++|++.+..+..++.+++|++|+|++|++++ .+|..|..+++|+.|+|++|++++..+..+ +.+|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 9999996666689999999999999999986 368999999999999999999996655555 66666 7899999
Q ss_pred ccccCCCcccccccccceeccCCCC
Q 004155 156 SFTAGSSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 156 ~l~~~~p~~~~~l~~L~~l~~s~~~ 180 (771)
++++..+..+.. .+|+.|+++.+.
T Consensus 188 ~l~~~~~~~~~~-~~L~~L~L~~n~ 211 (276)
T 2z62_A 188 PMNFIQPGAFKE-IRLKELALDTNQ 211 (276)
T ss_dssp CCCEECTTSSCS-CCEEEEECCSSC
T ss_pred cccccCccccCC-CcccEEECCCCc
Confidence 998766665544 378888877553
No 268
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.85 E-value=8.3e-22 Score=231.19 Aligned_cols=163 Identities=18% Similarity=0.290 Sum_probs=152.8
Q ss_pred cccccCCccccCCCcCCEEEcccCCcccc-----------------Cchhhc--CCcCCCEEEcCCCCCCCCCCCCccCC
Q 004155 14 HFTGKIPNFIQNWTLLEKLVIQASGLVGP-----------------IPSGIA--SLSKLTDLRISDLNGTEAPFPPLDKM 74 (771)
Q Consensus 14 ~l~~~ip~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l 74 (771)
+|+| ||..|+++++|++|+|++|+|+|. +|..++ +|++|++|+|++|++.+..|..|+++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 5555 899999999999999999999986 999999 99999999999999999999999999
Q ss_pred CCCcEEEccCCc-Ccc-cCChhhhcC------CCCcEEEccCCCCCCCCCc--cccCCCCCcEEEcCCCcccccCchhh-
Q 004155 75 KKMKTLILRSCN-VSG-KLPDYLGLM------TSLKVLDVSFNKLNGAIPS--TFMGLLDVDYIYLTGNLLTGTIPPWM- 143 (771)
Q Consensus 75 ~~L~~L~Ls~N~-l~g-~~p~~~~~l------~~L~~L~Ls~N~l~g~ip~--~~~~l~~L~~L~Ls~N~l~g~iP~~~- 143 (771)
++|++|+|++|+ ++| .+|..++.+ ++|++|+|++|+++ .+|. .++.+++|+.|+|++|+++|.+| .+
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~ 350 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFG 350 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhC
Confidence 999999999999 998 899999887 99999999999999 8998 89999999999999999999999 66
Q ss_pred -hhcCCeecccCCccccCCCcccccccc-cceeccCCCC
Q 004155 144 -LQKGDRVDLSYNSFTAGSSETSCQYRS-VNLFASSSKG 180 (771)
Q Consensus 144 -~~~L~~l~ls~N~l~~~~p~~~~~l~~-L~~l~~s~~~ 180 (771)
+++|+.|+|++|+++ .+|..+..+++ |+.|+++.|.
T Consensus 351 ~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~ 388 (636)
T 4eco_A 351 SEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNK 388 (636)
T ss_dssp EEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSC
T ss_pred CCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCc
Confidence 889999999999999 78888999999 9999998664
No 269
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.85 E-value=8.1e-21 Score=200.59 Aligned_cols=172 Identities=20% Similarity=0.239 Sum_probs=149.0
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
+++|+.|++++|+|+ .+|..+. ++|+.|+|++|+|++..|..|..+++|+.|+|++|++++.++. ..+++|++|+
T Consensus 9 l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~ 83 (290)
T 1p9a_G 9 VASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLD 83 (290)
T ss_dssp STTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEE
T ss_pred cCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEE
Confidence 678999999999999 8888775 6899999999999987788899999999999999999886543 7889999999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCcccc
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFTA 159 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~~ 159 (771)
|++|+|+ .+|..+..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..+ +++|+.|+|++|+|+.
T Consensus 84 Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 162 (290)
T 1p9a_G 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (290)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred CCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCc
Confidence 9999998 888888999999999999999997667789999999999999999995444444 6789999999999997
Q ss_pred CCCcccccccccceeccCCC
Q 004155 160 GSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 160 ~~p~~~~~l~~L~~l~~s~~ 179 (771)
..+..+..+++|+.|+++.|
T Consensus 163 l~~~~~~~l~~L~~L~L~~N 182 (290)
T 1p9a_G 163 LPAGLLNGLENLDTLLLQEN 182 (290)
T ss_dssp CCTTTTTTCTTCCEEECCSS
T ss_pred cCHHHhcCcCCCCEEECCCC
Confidence 77777888999999988754
No 270
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=6.3e-21 Score=191.02 Aligned_cols=163 Identities=19% Similarity=0.181 Sum_probs=113.5
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
.++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|++++.++..|.++++|++|+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 106 (208)
T 2o6s_A 27 PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELA 106 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEE
Confidence 34677777777777744444566777777777777777754455567777777777777777776666677777777777
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhhhhcCCeecccCCccccCC
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWMLQKGDRVDLSYNSFTAGS 161 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~L~~l~ls~N~l~~~~ 161 (771)
|++|+|++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+.+..| .|+.|+++.|+++|.+
T Consensus 107 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~-----~l~~L~~~~n~~~g~i 181 (208)
T 2o6s_A 107 LNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-----GIRYLSEWINKHSGVV 181 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT-----TTHHHHHHHHHCTTTB
T ss_pred cCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC-----CHHHHHHHHHhCCcee
Confidence 77777775555556777777777777777775555556777777777777777775543 5667777777777777
Q ss_pred Cccccccc
Q 004155 162 SETSCQYR 169 (771)
Q Consensus 162 p~~~~~l~ 169 (771)
|+.++.+.
T Consensus 182 p~~~~~l~ 189 (208)
T 2o6s_A 182 RNSAGSVA 189 (208)
T ss_dssp BCTTSSBC
T ss_pred eccCcccc
Confidence 76665543
No 271
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.85 E-value=1.2e-20 Score=197.31 Aligned_cols=159 Identities=19% Similarity=0.214 Sum_probs=144.7
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
+++|+.|+|++|++++ ++ .+.++++|++|+|++|+|++..|..|..+++|++|+|++|++++.++..|.++++|++|+
T Consensus 62 l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHD-IS-ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCC-CG-GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCC-ch-hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 6899999999999995 44 799999999999999999977777899999999999999999999888899999999999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCcccc
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFTA 159 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~~ 159 (771)
|++|++++..|..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..+ +++|+.|+|++|++.+
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 99999997667778999999999999999997777778999999999999999997666555 8899999999999987
Q ss_pred CCC
Q 004155 160 GSS 162 (771)
Q Consensus 160 ~~p 162 (771)
..|
T Consensus 220 ~~~ 222 (272)
T 3rfs_A 220 TCP 222 (272)
T ss_dssp CTT
T ss_pred cCc
Confidence 655
No 272
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.85 E-value=9e-21 Score=198.62 Aligned_cols=163 Identities=17% Similarity=0.151 Sum_probs=115.0
Q ss_pred EEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCCc
Q 004155 7 DFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSCN 86 (771)
Q Consensus 7 ~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 86 (771)
.++.++.+++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|++++.++..|.++++|++|+|++|+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 4555666666 6776554 467777777777775555577777777777777777777766677777777777777777
Q ss_pred CcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccc-cCchhh--hhcCCeecccCCccccCCCc
Q 004155 87 VSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTG-TIPPWM--LQKGDRVDLSYNSFTAGSSE 163 (771)
Q Consensus 87 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g-~iP~~~--~~~L~~l~ls~N~l~~~~p~ 163 (771)
+++..|..|.++++|++|++++|++++..+..+..+++|++|+|++|++++ .+|..+ +++|+.|+|++|++++..+.
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~ 167 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred cCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHH
Confidence 776666677777777777777777775555567777777777777777764 256655 66777777777777776666
Q ss_pred ccccccccc
Q 004155 164 TSCQYRSVN 172 (771)
Q Consensus 164 ~~~~l~~L~ 172 (771)
.+..+.+|+
T Consensus 168 ~~~~l~~L~ 176 (276)
T 2z62_A 168 DLRVLHQMP 176 (276)
T ss_dssp GGHHHHTCT
T ss_pred Hhhhhhhcc
Confidence 666666666
No 273
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.85 E-value=1.5e-21 Score=208.53 Aligned_cols=174 Identities=15% Similarity=0.145 Sum_probs=146.3
Q ss_pred CCCCcEEEccCCcccccCCccc--cCCCcCCEEEcccCCccccCchhhcCC-----cCCCEEEcCCCCCCCCCCCCccCC
Q 004155 2 LVTLKDFRISDNHFTGKIPNFI--QNWTLLEKLVIQASGLVGPIPSGIASL-----SKLTDLRISDLNGTEAPFPPLDKM 74 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~n~l~~~~~~~~~~l 74 (771)
+++|++|+|++|+|++.+|..+ ..+++|++|+|++|+|++. |..++.+ ++|++|+|++|++++.++..|+++
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 6789999999999999999876 8899999999999999976 8888887 899999999999999988899999
Q ss_pred CCCcEEEccCCcCccc--CChhh--hcCCCCcEEEccCCCCCC--CCC-ccccCCCCCcEEEcCCCcccccCchh-h--h
Q 004155 75 KKMKTLILRSCNVSGK--LPDYL--GLMTSLKVLDVSFNKLNG--AIP-STFMGLLDVDYIYLTGNLLTGTIPPW-M--L 144 (771)
Q Consensus 75 ~~L~~L~Ls~N~l~g~--~p~~~--~~l~~L~~L~Ls~N~l~g--~ip-~~~~~l~~L~~L~Ls~N~l~g~iP~~-~--~ 144 (771)
++|++|+|++|++.|. +|..+ ..+++|++|+|++|+|++ .++ ..+..+++|++|+|++|++++.+|.. + +
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhc
Confidence 9999999999998866 34454 889999999999999983 222 33467889999999999999766532 2 6
Q ss_pred hcCCeecccCCccccCCCcccccccccceeccCCC
Q 004155 145 QKGDRVDLSYNSFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 145 ~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
++|+.|+|++|+++ .+|..+. ++|+.|+++.|
T Consensus 253 ~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N 284 (312)
T 1wwl_A 253 SQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYN 284 (312)
T ss_dssp TTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSS
T ss_pred CCCCEEECCCCccC-hhhhhcc--CCceEEECCCC
Confidence 88999999999998 6677665 78888888755
No 274
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.84 E-value=2.4e-21 Score=206.14 Aligned_cols=177 Identities=18% Similarity=0.216 Sum_probs=156.7
Q ss_pred CCCCcEEEccCCcccccCCcc-ccCCCcCCEEEcccCCcc--ccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCc
Q 004155 2 LVTLKDFRISDNHFTGKIPNF-IQNWTLLEKLVIQASGLV--GPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMK 78 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~-~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 78 (771)
.++|++|+|++|+++ .+|.. |.++++|++|+|++|+++ +..|..+..+++|++|+|++|.++..+ ..+..+++|+
T Consensus 27 ~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~l~-~~~~~l~~L~ 104 (306)
T 2z66_A 27 PSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMS-SNFLGLEQLE 104 (306)
T ss_dssp CTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEEEE-EEEETCTTCC
T ss_pred CCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccccCh-hhcCCCCCCC
Confidence 358999999999999 67764 789999999999999998 334788889999999999999998754 5688999999
Q ss_pred EEEccCCcCcccCC-hhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccc-cCchhh--hhcCCeecccC
Q 004155 79 TLILRSCNVSGKLP-DYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTG-TIPPWM--LQKGDRVDLSY 154 (771)
Q Consensus 79 ~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g-~iP~~~--~~~L~~l~ls~ 154 (771)
+|+|++|++++..+ ..+..+++|++|+|++|.+++..|..+..+++|++|+|++|.+++ .+|..+ +++|+.|+|++
T Consensus 105 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~ 184 (306)
T 2z66_A 105 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 184 (306)
T ss_dssp EEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred EEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCC
Confidence 99999999995544 579999999999999999998888889999999999999999986 567766 88999999999
Q ss_pred CccccCCCcccccccccceeccCCCC
Q 004155 155 NSFTAGSSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 155 N~l~~~~p~~~~~l~~L~~l~~s~~~ 180 (771)
|.+++..|..+..+++|+.|+++.|.
T Consensus 185 n~l~~~~~~~~~~l~~L~~L~L~~N~ 210 (306)
T 2z66_A 185 CQLEQLSPTAFNSLSSLQVLNMSHNN 210 (306)
T ss_dssp SCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred CCcCCcCHHHhcCCCCCCEEECCCCc
Confidence 99999989999999999999988654
No 275
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.84 E-value=2.8e-20 Score=194.31 Aligned_cols=173 Identities=18% Similarity=0.186 Sum_probs=156.1
Q ss_pred CCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEcc
Q 004155 4 TLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILR 83 (771)
Q Consensus 4 ~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 83 (771)
+++.+++++|+++ .+|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|+++..++..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 5789999999999 8998776 689999999999997667789999999999999999999888889999999999999
Q ss_pred CCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCccccCC
Q 004155 84 SCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFTAGS 161 (771)
Q Consensus 84 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~~~~ 161 (771)
+|++++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..+ +++|+.|+|++|.+++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 999996666678999999999999999998777889999999999999999995444334 789999999999999988
Q ss_pred CcccccccccceeccCCC
Q 004155 162 SETSCQYRSVNLFASSSK 179 (771)
Q Consensus 162 p~~~~~l~~L~~l~~s~~ 179 (771)
+..+..+++|+.|+++.+
T Consensus 174 ~~~~~~l~~L~~L~L~~N 191 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNN 191 (270)
T ss_dssp TTTTTTCTTCCEEECCSS
T ss_pred hhHhccCCCcCEEECCCC
Confidence 888999999999998865
No 276
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.84 E-value=1e-21 Score=230.45 Aligned_cols=173 Identities=17% Similarity=0.312 Sum_probs=158.6
Q ss_pred CCcEEEccCCcccccCCccccCCCcCCEEEcccC----------------------------------------------
Q 004155 4 TLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQAS---------------------------------------------- 37 (771)
Q Consensus 4 ~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N---------------------------------------------- 37 (771)
+++.|+|++|+++|.+|+.|++|++|++|+|++|
T Consensus 82 ~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~ 161 (636)
T 4eco_A 82 RVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDL 161 (636)
T ss_dssp CEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHH
T ss_pred CEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHH
Confidence 6889999999999999999999999999999998
Q ss_pred --------------------------------CccccCchhhcCCcCCCEEEcCCCCCCCC-----------------CC
Q 004155 38 --------------------------------GLVGPIPSGIASLSKLTDLRISDLNGTEA-----------------PF 68 (771)
Q Consensus 38 --------------------------------~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-----------------~~ 68 (771)
+|+| +|.+|++|++|++|+|++|++++. .|
T Consensus 162 ~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip 240 (636)
T 4eco_A 162 IKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKT 240 (636)
T ss_dssp HHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT
T ss_pred HHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCc
Confidence 4445 889999999999999999999984 67
Q ss_pred CCcc--CCCCCcEEEccCCcCcccCChhhhcCCCCcEEEccCCC-CCC-CCCccccCC------CCCcEEEcCCCccccc
Q 004155 69 PPLD--KMKKMKTLILRSCNVSGKLPDYLGLMTSLKVLDVSFNK-LNG-AIPSTFMGL------LDVDYIYLTGNLLTGT 138 (771)
Q Consensus 69 ~~~~--~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g-~ip~~~~~l------~~L~~L~Ls~N~l~g~ 138 (771)
..++ ++++|++|+|++|++.|.+|..|+++++|++|+|++|+ ++| .+|..++.+ ++|++|+|++|+++ .
T Consensus 241 ~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ 319 (636)
T 4eco_A 241 EDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-T 319 (636)
T ss_dssp SCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-S
T ss_pred hhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-c
Confidence 8888 99999999999999999999999999999999999998 998 899988876 89999999999999 8
Q ss_pred Cch--hh--hhcCCeecccCCccccCCCcccccccccceeccCCC
Q 004155 139 IPP--WM--LQKGDRVDLSYNSFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 139 iP~--~~--~~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
+|. .+ +++|+.|++++|.++|.+| .+..+++|+.|+++.+
T Consensus 320 ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N 363 (636)
T 4eco_A 320 FPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYN 363 (636)
T ss_dssp CCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSS
T ss_pred cCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCC
Confidence 998 66 8899999999999998899 8999999999998765
No 277
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.84 E-value=1.7e-20 Score=211.10 Aligned_cols=176 Identities=18% Similarity=0.175 Sum_probs=128.9
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEc
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLIL 82 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 82 (771)
++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|++|+|++|+++..++..|.++++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 57888999999988777788888889999999999888777788888889999999998888888778888888888888
Q ss_pred cCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCc-cccCCCCCcEEEcCCCcccccCchhh-hhcCCeecccCCccccC
Q 004155 83 RSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPS-TFMGLLDVDYIYLTGNLLTGTIPPWM-LQKGDRVDLSYNSFTAG 160 (771)
Q Consensus 83 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~-~~~~l~~L~~L~Ls~N~l~g~iP~~~-~~~L~~l~ls~N~l~~~ 160 (771)
++|+|+...+..|.++++|+.|+|++|+..+.+|. .|..+++|++|+|++|+++ .+|... +++|+.|+|++|++++.
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMPNLTPLVGLEELEMSGNHFPEI 233 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS-SCCCCTTCTTCCEEECTTSCCSEE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccc-ccccccccccccEEECcCCcCccc
Confidence 88888855455677777777777776433334443 4666666666666666666 344322 55666666666666666
Q ss_pred CCcccccccccceeccCCC
Q 004155 161 SSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 161 ~p~~~~~l~~L~~l~~s~~ 179 (771)
.|..+..+++|+.|+++.+
T Consensus 234 ~~~~~~~l~~L~~L~L~~n 252 (452)
T 3zyi_A 234 RPGSFHGLSSLKKLWVMNS 252 (452)
T ss_dssp CGGGGTTCTTCCEEECTTS
T ss_pred CcccccCccCCCEEEeCCC
Confidence 6666666666666665543
No 278
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.84 E-value=2.3e-20 Score=197.08 Aligned_cols=172 Identities=16% Similarity=0.081 Sum_probs=152.0
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
.++|+.|+|++|+|++..|..|.++++|++|+|++|+|++ +|.. +.+++|+.|+|++|+++.. |..+..+++|++|+
T Consensus 30 ~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~ 106 (290)
T 1p9a_G 30 PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLGTLDLSHNQLQSL-PLLGQTLPALTVLD 106 (290)
T ss_dssp CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCCEEECCSSCCSSC-CCCTTTCTTCCEEE
T ss_pred CCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCCEEECCCCcCCcC-chhhccCCCCCEEE
Confidence 3679999999999997778899999999999999999995 4543 7899999999999999965 46789999999999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh---hhcCCeecccCCccc
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM---LQKGDRVDLSYNSFT 158 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~---~~~L~~l~ls~N~l~ 158 (771)
|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|... +++|+.|+|++|+++
T Consensus 107 l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 107 VSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp CCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS-CCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC-ccCHHHhcCcCCCCEEECCCCcCC
Confidence 9999999666688999999999999999999777777899999999999999999 566543 789999999999999
Q ss_pred cCCCcccccccccceeccCC
Q 004155 159 AGSSETSCQYRSVNLFASSS 178 (771)
Q Consensus 159 ~~~p~~~~~l~~L~~l~~s~ 178 (771)
.+|..+..+.+|+.++++.
T Consensus 186 -~ip~~~~~~~~L~~l~L~~ 204 (290)
T 1p9a_G 186 -TIPKGFFGSHLLPFAFLHG 204 (290)
T ss_dssp -CCCTTTTTTCCCSEEECCS
T ss_pred -ccChhhcccccCCeEEeCC
Confidence 5777788888898888763
No 279
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.84 E-value=1.4e-20 Score=210.97 Aligned_cols=176 Identities=17% Similarity=0.201 Sum_probs=146.7
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
|++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+++..++..|.++++|+.|+
T Consensus 87 l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 166 (440)
T 3zyj_A 87 LRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLD 166 (440)
T ss_dssp CSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeC
Confidence 67899999999999966667899999999999999999966566799999999999999999988888888899999999
Q ss_pred ccCCcCcccCCh-hhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCccc
Q 004155 82 LRSCNVSGKLPD-YLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFT 158 (771)
Q Consensus 82 Ls~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~ 158 (771)
|++|+..+.++. .|.++++|+.|+|++|+|+ .+|. +..+++|+.|+|++|+|++..|..+ +++|+.|+|++|+++
T Consensus 167 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 244 (440)
T 3zyj_A 167 LGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ 244 (440)
T ss_dssp CCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCC-CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred CCCCCCcceeCcchhhcccccCeecCCCCcCc-cccc-cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCcee
Confidence 988544435554 6888888888888888888 6664 7888888888888888886666666 778888888888888
Q ss_pred cCCCcccccccccceeccCCC
Q 004155 159 AGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 159 ~~~p~~~~~l~~L~~l~~s~~ 179 (771)
+..+..+..+++|+.|+++.|
T Consensus 245 ~~~~~~~~~l~~L~~L~L~~N 265 (440)
T 3zyj_A 245 VIERNAFDNLQSLVEINLAHN 265 (440)
T ss_dssp EECTTSSTTCTTCCEEECTTS
T ss_pred EEChhhhcCCCCCCEEECCCC
Confidence 888888888888888888765
No 280
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.84 E-value=1.6e-20 Score=211.36 Aligned_cols=177 Identities=14% Similarity=0.132 Sum_probs=160.0
Q ss_pred CCCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEE
Q 004155 1 MLVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTL 80 (771)
Q Consensus 1 ~L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 80 (771)
.|++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+++..++..|.++++|+.|
T Consensus 97 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 176 (452)
T 3zyi_A 97 HLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRL 176 (452)
T ss_dssp TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEE
Confidence 36899999999999997777899999999999999999997667779999999999999999999988899999999999
Q ss_pred EccCCcCcccCCh-hhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCcc
Q 004155 81 ILRSCNVSGKLPD-YLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSF 157 (771)
Q Consensus 81 ~Ls~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l 157 (771)
+|++|+..+.+|. .|.++++|++|+|++|+|+ .+| .+..+++|+.|+|++|+|++..|..+ +++|+.|+|++|++
T Consensus 177 ~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l 254 (452)
T 3zyi_A 177 DLGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQV 254 (452)
T ss_dssp ECCCCTTCCEECTTTTTTCTTCCEEECTTSCCS-SCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCC
T ss_pred eCCCCCCccccChhhccCCCCCCEEECCCCccc-ccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcC
Confidence 9999554446654 6899999999999999999 566 48899999999999999998778777 88999999999999
Q ss_pred ccCCCcccccccccceeccCCC
Q 004155 158 TAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 158 ~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
++..|..+..+++|+.|+++.|
T Consensus 255 ~~~~~~~~~~l~~L~~L~L~~N 276 (452)
T 3zyi_A 255 SLIERNAFDGLASLVELNLAHN 276 (452)
T ss_dssp CEECTTTTTTCTTCCEEECCSS
T ss_pred ceECHHHhcCCCCCCEEECCCC
Confidence 9999999999999999999866
No 281
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.84 E-value=1.4e-20 Score=211.67 Aligned_cols=178 Identities=20% Similarity=0.226 Sum_probs=139.4
Q ss_pred CCCCcEEEccCCcccccCCcc--ccCCCcCCEEEcccCCccccCchh-hcCCcCCCEEEcCCCCCCCCCCCCccCC----
Q 004155 2 LVTLKDFRISDNHFTGKIPNF--IQNWTLLEKLVIQASGLVGPIPSG-IASLSKLTDLRISDLNGTEAPFPPLDKM---- 74 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~--~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~l---- 74 (771)
|++|++|+|++|++++.+|.. |.++++|++|+|++|++++..|.. +.++++|++|+|++|++++..+..+..+
T Consensus 102 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~ 181 (455)
T 3v47_A 102 LANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKH 181 (455)
T ss_dssp CTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCE
T ss_pred cccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccc
Confidence 567777777777777655544 777777777777777777666665 6777777777777777776655444322
Q ss_pred --------------------------------------------------------------------------------
Q 004155 75 -------------------------------------------------------------------------------- 74 (771)
Q Consensus 75 -------------------------------------------------------------------------------- 74 (771)
T Consensus 182 L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~ 261 (455)
T 3v47_A 182 FTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNF 261 (455)
T ss_dssp EEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSS
T ss_pred ccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhh
Confidence
Q ss_pred -------------CCCcEEEccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCch
Q 004155 75 -------------KKMKTLILRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPP 141 (771)
Q Consensus 75 -------------~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~ 141 (771)
++|+.|+|++|++++.+|..++.+++|+.|+|++|++++..|..|..+++|++|+|++|++++..|.
T Consensus 262 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 341 (455)
T 3v47_A 262 KDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSR 341 (455)
T ss_dssp CCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGG
T ss_pred ccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChh
Confidence 3566677777777777888899999999999999999988888899999999999999999876676
Q ss_pred hh--hhcCCeecccCCccccCCCcccccccccceeccCCC
Q 004155 142 WM--LQKGDRVDLSYNSFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 142 ~~--~~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
.+ +++|+.|+|++|++++..|..+..+++|+.|+++.|
T Consensus 342 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 381 (455)
T 3v47_A 342 MFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTN 381 (455)
T ss_dssp GGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred HhcCcccCCEEECCCCcccccChhhccccccccEEECCCC
Confidence 66 788999999999999888999999999999998764
No 282
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.84 E-value=1.3e-20 Score=213.49 Aligned_cols=179 Identities=15% Similarity=0.093 Sum_probs=165.4
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
.++|+.|+|++|+|++..|..|.++++|++|+|++|.|++..|..|.+|++|++|+|++|+++..++..|.++++|++|+
T Consensus 31 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 110 (477)
T 2id5_A 31 PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLD 110 (477)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEE
T ss_pred CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEE
Confidence 35799999999999977788999999999999999999988899999999999999999999999888899999999999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCcccc
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFTA 159 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~~ 159 (771)
|++|++.+..|..|..+++|+.|+|++|.+++..|..|..+++|+.|+|++|++++..+..+ +++|+.|+|++|.+++
T Consensus 111 Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~ 190 (477)
T 2id5_A 111 ISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINA 190 (477)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCE
T ss_pred CCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcE
Confidence 99999998889999999999999999999998888899999999999999999995444445 8899999999999999
Q ss_pred CCCcccccccccceeccCCCC
Q 004155 160 GSSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 160 ~~p~~~~~l~~L~~l~~s~~~ 180 (771)
..+..+..+++|+.|+++.+.
T Consensus 191 ~~~~~~~~l~~L~~L~l~~~~ 211 (477)
T 2id5_A 191 IRDYSFKRLYRLKVLEISHWP 211 (477)
T ss_dssp ECTTCSCSCTTCCEEEEECCT
T ss_pred eChhhcccCcccceeeCCCCc
Confidence 988899999999999988653
No 283
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.84 E-value=2.3e-21 Score=207.01 Aligned_cols=174 Identities=17% Similarity=0.158 Sum_probs=151.2
Q ss_pred CCCCcEEEccCCcccccCCccccCC-----CcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCC--CCCC--cc
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNW-----TLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEA--PFPP--LD 72 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~--~~~~--~~ 72 (771)
+++|++|+|++|+|++. |..++.+ ++|++|+|++|+|++..|..|+.+++|+.|+|++|++.+. .+.. +.
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 68899999999999966 8888887 9999999999999988889999999999999999998764 2223 48
Q ss_pred CCCCCcEEEccCCcCcc--cCC-hhhhcCCCCcEEEccCCCCCCCCC-ccccCCCCCcEEEcCCCcccccCchhhhhcCC
Q 004155 73 KMKKMKTLILRSCNVSG--KLP-DYLGLMTSLKVLDVSFNKLNGAIP-STFMGLLDVDYIYLTGNLLTGTIPPWMLQKGD 148 (771)
Q Consensus 73 ~l~~L~~L~Ls~N~l~g--~~p-~~~~~l~~L~~L~Ls~N~l~g~ip-~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~L~ 148 (771)
++++|++|+|++|+|++ .++ ..+..+++|+.|+|++|++++.+| ..+..+++|++|+|++|+|+ .+|..+.++|+
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~~~L~ 277 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLPAKLS 277 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCCSEEE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhccCCce
Confidence 89999999999999983 233 335678999999999999998775 45677899999999999999 89987778999
Q ss_pred eecccCCccccCCCcccccccccceeccCCC
Q 004155 149 RVDLSYNSFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 149 ~l~ls~N~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
.|+|++|++++. |. +..+++|+.++++.|
T Consensus 278 ~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N 306 (312)
T 1wwl_A 278 VLDLSYNRLDRN-PS-PDELPQVGNLSLKGN 306 (312)
T ss_dssp EEECCSSCCCSC-CC-TTTSCEEEEEECTTC
T ss_pred EEECCCCCCCCC-hh-HhhCCCCCEEeccCC
Confidence 999999999987 66 889999999998755
No 284
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.84 E-value=1.2e-20 Score=212.26 Aligned_cols=178 Identities=16% Similarity=0.185 Sum_probs=109.5
Q ss_pred CCCCcEEEccCCcccccCC-ccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCC--CccCCCCCc
Q 004155 2 LVTLKDFRISDNHFTGKIP-NFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFP--PLDKMKKMK 78 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~--~~~~l~~L~ 78 (771)
+++|++|+|++|.+.+.+| ..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..+. .|.++++|+
T Consensus 53 l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~ 132 (455)
T 3v47_A 53 LQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLE 132 (455)
T ss_dssp CTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCC
T ss_pred CccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCC
Confidence 4556666666666654443 3456666666666666666655566666666666666666666553222 255566666
Q ss_pred EEEccCCcCcccCChh-hhcCCCCcEEEccCCCCCCCCCccccCC-----------------------------------
Q 004155 79 TLILRSCNVSGKLPDY-LGLMTSLKVLDVSFNKLNGAIPSTFMGL----------------------------------- 122 (771)
Q Consensus 79 ~L~Ls~N~l~g~~p~~-~~~l~~L~~L~Ls~N~l~g~ip~~~~~l----------------------------------- 122 (771)
+|+|++|++++..|.. +.++++|++|+|++|++++..|..+..+
T Consensus 133 ~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~ 212 (455)
T 3v47_A 133 MLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNT 212 (455)
T ss_dssp EEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTC
T ss_pred EEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccc
Confidence 6666666666554544 5556666666666666555444333221
Q ss_pred --------------------------------------------------------------CCCcEEEcCCCcccccCc
Q 004155 123 --------------------------------------------------------------LDVDYIYLTGNLLTGTIP 140 (771)
Q Consensus 123 --------------------------------------------------------------~~L~~L~Ls~N~l~g~iP 140 (771)
++|+.|+|++|++++.+|
T Consensus 213 ~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 292 (455)
T 3v47_A 213 SITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLK 292 (455)
T ss_dssp EEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECT
T ss_pred eeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccch
Confidence 355666666666665566
Q ss_pred hhh--hhcCCeecccCCccccCCCcccccccccceeccCCC
Q 004155 141 PWM--LQKGDRVDLSYNSFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 141 ~~~--~~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
..+ +++|+.|+|++|++++..|..+..+++|+.|+++.|
T Consensus 293 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 333 (455)
T 3v47_A 293 SVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQN 333 (455)
T ss_dssp TTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred hhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCC
Confidence 655 677888888888888777777888888888877755
No 285
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.83 E-value=2.7e-20 Score=208.65 Aligned_cols=178 Identities=21% Similarity=0.176 Sum_probs=161.4
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
.++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+++..++..|..+++|++|+
T Consensus 63 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 142 (440)
T 3zyj_A 63 STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELW 142 (440)
T ss_dssp CTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEE
T ss_pred CCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceee
Confidence 35799999999999977778999999999999999999988889999999999999999999999888999999999999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCc-cccCCCCCcEEEcCCCcccccCchhh-hhcCCeecccCCcccc
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPS-TFMGLLDVDYIYLTGNLLTGTIPPWM-LQKGDRVDLSYNSFTA 159 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~-~~~~l~~L~~L~Ls~N~l~g~iP~~~-~~~L~~l~ls~N~l~~ 159 (771)
|++|+|+...+..|..+++|+.|+|++|+..+.++. .|.++++|++|+|++|+|+ .+|... +++|+.|+|++|++++
T Consensus 143 L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~l~~ 221 (440)
T 3zyj_A 143 LRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGNHLSA 221 (440)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCCCTTCSSCCEEECTTSCCCE
T ss_pred CCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccccCCCcccCEEECCCCccCc
Confidence 999999966667899999999999999555446655 6999999999999999999 778644 8899999999999999
Q ss_pred CCCcccccccccceeccCCCC
Q 004155 160 GSSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 160 ~~p~~~~~l~~L~~l~~s~~~ 180 (771)
..|..+..+++|+.|+++.+.
T Consensus 222 ~~~~~~~~l~~L~~L~L~~n~ 242 (440)
T 3zyj_A 222 IRPGSFQGLMHLQKLWMIQSQ 242 (440)
T ss_dssp ECTTTTTTCTTCCEEECTTCC
T ss_pred cChhhhccCccCCEEECCCCc
Confidence 999999999999999988653
No 286
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=2.8e-20 Score=188.17 Aligned_cols=154 Identities=19% Similarity=0.236 Sum_probs=139.8
Q ss_pred cEEEccCCcccccCCccccCCCcCCEEEcccCCccccCc-hhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccC
Q 004155 6 KDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIP-SGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRS 84 (771)
Q Consensus 6 ~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 84 (771)
+.|++++|+++ .+|..+. ..+++|+|++|+|++..| ..|..+++|+.|+|++|++++.++..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 58999999999 7998775 467999999999997655 4589999999999999999999988999999999999999
Q ss_pred CcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCccccCCC
Q 004155 85 CNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFTAGSS 162 (771)
Q Consensus 85 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~~~~p 162 (771)
|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+ +++|+.|+|++|++++..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99997777789999999999999999998889999999999999999999997778777 8899999999999997543
No 287
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.83 E-value=1.2e-20 Score=193.41 Aligned_cols=174 Identities=19% Similarity=0.197 Sum_probs=155.5
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCC-ccccCchhhcCCcCCCEEEcCC-CCCCCCCCCCccCCCCCcEE
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASG-LVGPIPSGIASLSKLTDLRISD-LNGTEAPFPPLDKMKKMKTL 80 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L 80 (771)
.+|+.|+|++|+|++..+..|.++++|++|+|++|+ +++..+..|.++++|++|+|++ |+++..++..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 579999999999995555589999999999999997 8866667899999999999998 99999988899999999999
Q ss_pred EccCCcCcccCChhhhcCCCCc---EEEccCC-CCCCCCCccccCCCCCc-EEEcCCCcccccCchhh--hhcCCeeccc
Q 004155 81 ILRSCNVSGKLPDYLGLMTSLK---VLDVSFN-KLNGAIPSTFMGLLDVD-YIYLTGNLLTGTIPPWM--LQKGDRVDLS 153 (771)
Q Consensus 81 ~Ls~N~l~g~~p~~~~~l~~L~---~L~Ls~N-~l~g~ip~~~~~l~~L~-~L~Ls~N~l~g~iP~~~--~~~L~~l~ls 153 (771)
+|++|++++ +|. +..+++|+ .|+|++| ++++..+..|..+++|+ .|+|++|+++ .+|... ..+|+.|+|+
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcC
Confidence 999999994 887 88899998 9999999 99966666799999999 9999999999 777654 5679999999
Q ss_pred CCc-cccCCCcccccc-cccceeccCCC
Q 004155 154 YNS-FTAGSSETSCQY-RSVNLFASSSK 179 (771)
Q Consensus 154 ~N~-l~~~~p~~~~~l-~~L~~l~~s~~ 179 (771)
+|+ ++...+..+..+ ++|+.++++.+
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N 215 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQT 215 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCC
Confidence 995 998888889999 99999998864
No 288
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.83 E-value=5.5e-21 Score=229.08 Aligned_cols=158 Identities=16% Similarity=0.236 Sum_probs=141.7
Q ss_pred CCccccCCCcCCEEEcccCCccc-----------------cCchhhc--CCcCCCEEEcCCCCCCCCCCCCccCCCCCcE
Q 004155 19 IPNFIQNWTLLEKLVIQASGLVG-----------------PIPSGIA--SLSKLTDLRISDLNGTEAPFPPLDKMKKMKT 79 (771)
Q Consensus 19 ip~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~~~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 79 (771)
||..|++|++|+.|+|++|+|+| .+|..++ +|++|+.|+|++|++.+..|..|++|++|+.
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 88889999999999999999998 3899887 9999999999999999988888999999999
Q ss_pred EEccCCc-Ccc-cCChhhhcCC-------CCcEEEccCCCCCCCCCc--cccCCCCCcEEEcCCCcccccCchhh--hhc
Q 004155 80 LILRSCN-VSG-KLPDYLGLMT-------SLKVLDVSFNKLNGAIPS--TFMGLLDVDYIYLTGNLLTGTIPPWM--LQK 146 (771)
Q Consensus 80 L~Ls~N~-l~g-~~p~~~~~l~-------~L~~L~Ls~N~l~g~ip~--~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~ 146 (771)
|+|++|+ |+| .+|..+++++ +|+.|+|++|+|+ .+|. .|+++++|+.|+|++|+++ .+| .+ +++
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~ 596 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVK 596 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSE
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCc
Confidence 9999998 998 8998887766 9999999999999 8998 8999999999999999999 888 55 788
Q ss_pred CCeecccCCccccCCCcccccccc-cceeccCCCC
Q 004155 147 GDRVDLSYNSFTAGSSETSCQYRS-VNLFASSSKG 180 (771)
Q Consensus 147 L~~l~ls~N~l~~~~p~~~~~l~~-L~~l~~s~~~ 180 (771)
|+.|+|++|+++ .+|..+..+++ |+.|+++.|.
T Consensus 597 L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~ 630 (876)
T 4ecn_A 597 LTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNK 630 (876)
T ss_dssp ESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSC
T ss_pred ceEEECcCCccc-cchHHHhhccccCCEEECcCCC
Confidence 999999999999 78888999988 9999988664
No 289
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.82 E-value=4e-21 Score=230.23 Aligned_cols=176 Identities=19% Similarity=0.236 Sum_probs=155.8
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEc-ccCCcccc---------------------------------------
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVI-QASGLVGP--------------------------------------- 42 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L-~~N~l~~~--------------------------------------- 42 (771)
.+++.|+|++|+|+|.+|+.|++|++|+.|+| ++|.++|.
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 36889999999999999999999999999999 77766554
Q ss_pred -------------------------------------CchhhcCCcCCCEEEcCCCCCCC-----------------CCC
Q 004155 43 -------------------------------------IPSGIASLSKLTDLRISDLNGTE-----------------APF 68 (771)
Q Consensus 43 -------------------------------------~p~~~~~l~~L~~L~L~~n~l~~-----------------~~~ 68 (771)
+|..|++|++|+.|+|++|++++ ..|
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP 482 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYEN 482 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCC
Confidence 88889999999999999999998 266
Q ss_pred CCcc--CCCCCcEEEccCCcCcccCChhhhcCCCCcEEEccCCC-CCC-CCCccccCCC-------CCcEEEcCCCcccc
Q 004155 69 PPLD--KMKKMKTLILRSCNVSGKLPDYLGLMTSLKVLDVSFNK-LNG-AIPSTFMGLL-------DVDYIYLTGNLLTG 137 (771)
Q Consensus 69 ~~~~--~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g-~ip~~~~~l~-------~L~~L~Ls~N~l~g 137 (771)
+.++ ++++|++|+|++|++.|.+|..|+++++|+.|+|++|+ |+| .+|..++.++ +|+.|+|++|+|+
T Consensus 483 ~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~- 561 (876)
T 4ecn_A 483 EELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE- 561 (876)
T ss_dssp SCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-
T ss_pred hhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-
Confidence 7776 99999999999999999999999999999999999998 998 8888776655 9999999999999
Q ss_pred cCch--hh--hhcCCeecccCCccccCCCcccccccccceeccCCCCC
Q 004155 138 TIPP--WM--LQKGDRVDLSYNSFTAGSSETSCQYRSVNLFASSSKGN 181 (771)
Q Consensus 138 ~iP~--~~--~~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s~~~~ 181 (771)
.+|. .+ +++|+.|+|++|+++ .+| .+..+++|+.|+++.|.-
T Consensus 562 ~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l 607 (876)
T 4ecn_A 562 EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQI 607 (876)
T ss_dssp BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCC
T ss_pred ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCcc
Confidence 8888 66 889999999999999 777 889999999999876543
No 290
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.82 E-value=7.8e-20 Score=196.69 Aligned_cols=174 Identities=18% Similarity=0.207 Sum_probs=152.5
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEc
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLIL 82 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 82 (771)
++|+.|+|++|+|++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|+++..+...+ ++|++|+|
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~---~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMP---KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSCC---TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCccChhhc---ccccEEEC
Confidence 578999999999996656689999999999999999998889999999999999999999987654333 78999999
Q ss_pred cCCcCcccCChhhhcCCCCcEEEccCCCCC--CCCCccccCCCCCcEEEcCCCcccccCchhhhhcCCeecccCCccccC
Q 004155 83 RSCNVSGKLPDYLGLMTSLKVLDVSFNKLN--GAIPSTFMGLLDVDYIYLTGNLLTGTIPPWMLQKGDRVDLSYNSFTAG 160 (771)
Q Consensus 83 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~--g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~L~~l~ls~N~l~~~ 160 (771)
++|++++..+..+.++++|+.|+|++|.+. +..+..+..+++|++|++++|+++ .+|..+.++|+.|++++|.+++.
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~L~~L~l~~n~l~~~ 207 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLPPSLTELHLDGNKITKV 207 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCCTTCSEEECTTSCCCEE
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCccccccCCEEECCCCcCCcc
Confidence 999999666677899999999999999996 367788999999999999999998 68877778999999999999998
Q ss_pred CCcccccccccceeccCCCC
Q 004155 161 SSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 161 ~p~~~~~l~~L~~l~~s~~~ 180 (771)
.|..+..+++|+.|+++.+.
T Consensus 208 ~~~~~~~l~~L~~L~Ls~n~ 227 (330)
T 1xku_A 208 DAASLKGLNNLAKLGLSFNS 227 (330)
T ss_dssp CTGGGTTCTTCCEEECCSSC
T ss_pred CHHHhcCCCCCCEEECCCCc
Confidence 88999999999999987653
No 291
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.82 E-value=1.2e-20 Score=201.19 Aligned_cols=174 Identities=14% Similarity=0.124 Sum_probs=143.8
Q ss_pred CCCcEEEccCCcccccCCccc--cCCCcCCEEEcccCCccccCc----hhhcCCcCCCEEEcCCCCCCCCCCCCccCCCC
Q 004155 3 VTLKDFRISDNHFTGKIPNFI--QNWTLLEKLVIQASGLVGPIP----SGIASLSKLTDLRISDLNGTEAPFPPLDKMKK 76 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 76 (771)
++|++|+|++|++++.+|..+ ..+++|++|+|++|++++..| ..+..+++|++|+|++|++++.++..|.++++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 579999999999999999888 889999999999999997665 45567999999999999999988889999999
Q ss_pred CcEEEccCCcCccc--C--ChhhhcCCCCcEEEccCCCCCCCCCc----cccCCCCCcEEEcCCCcccccCchhh--h--
Q 004155 77 MKTLILRSCNVSGK--L--PDYLGLMTSLKVLDVSFNKLNGAIPS----TFMGLLDVDYIYLTGNLLTGTIPPWM--L-- 144 (771)
Q Consensus 77 L~~L~Ls~N~l~g~--~--p~~~~~l~~L~~L~Ls~N~l~g~ip~----~~~~l~~L~~L~Ls~N~l~g~iP~~~--~-- 144 (771)
|++|+|++|++.+. + +..++.+++|++|+|++|+|+ .+|. .+..+++|++|+|++|+|++.+|..+ +
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 99999999998753 2 233478889999999999997 4444 25678899999999999997767655 3
Q ss_pred -hcCCeecccCCccccCCCcccccccccceeccCCCC
Q 004155 145 -QKGDRVDLSYNSFTAGSSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 145 -~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s~~~ 180 (771)
++|+.|+|++|+++ .+|..+. ++|+.|++++|.
T Consensus 250 ~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~ 283 (310)
T 4glp_A 250 SSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNR 283 (310)
T ss_dssp CTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCC
T ss_pred cCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCc
Confidence 68999999999998 5666664 688888887653
No 292
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=8.1e-20 Score=184.74 Aligned_cols=152 Identities=16% Similarity=0.227 Sum_probs=136.2
Q ss_pred cEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCC
Q 004155 6 KDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSC 85 (771)
Q Consensus 6 ~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 85 (771)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 57899999999 8998776 78999999999999777778999999999999999999998999999999999999999
Q ss_pred cCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCccccC
Q 004155 86 NVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFTAG 160 (771)
Q Consensus 86 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~~~ 160 (771)
+|+...+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+ +++|+.|+|++|++.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 9994444557899999999999999998888999999999999999999996555555 78899999999999863
No 293
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=1.2e-19 Score=184.56 Aligned_cols=154 Identities=18% Similarity=0.158 Sum_probs=137.8
Q ss_pred CcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccC
Q 004155 5 LKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRS 84 (771)
Q Consensus 5 L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 84 (771)
.+.++.++++++ .+|..+. ++|++|+|++|+|++..|..|..+++|+.|+|++|++...++..|.++++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 467899999998 9998775 8999999999999988899999999999999999999998888899999999999999
Q ss_pred CcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCccccCCC
Q 004155 85 CNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFTAGSS 162 (771)
Q Consensus 85 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~~~~p 162 (771)
|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+ +++|+.|+|++|++.+..+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 9999666667899999999999999999 899999999999999999999995444444 7899999999999987543
No 294
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.82 E-value=6.2e-20 Score=214.22 Aligned_cols=177 Identities=15% Similarity=0.145 Sum_probs=130.3
Q ss_pred CCCCcEEEccCCcccccC--CccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCC-ccCCCCCc
Q 004155 2 LVTLKDFRISDNHFTGKI--PNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPP-LDKMKKMK 78 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~i--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~ 78 (771)
+++|+.|+|++|++++.. |..+.++++|++|+|++|++++..|..|..+++|+.|+|++|++++..++. +.++++|+
T Consensus 349 l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 428 (606)
T 3t6q_A 349 LENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLK 428 (606)
T ss_dssp CTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCC
T ss_pred cCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCC
Confidence 567788888888877544 667777778888888888877777777777778888888877777665443 77777777
Q ss_pred EEEccCCcCcccCChhhhcCCCCcEEEccCCCCCCC---CCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeeccc
Q 004155 79 TLILRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGA---IPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLS 153 (771)
Q Consensus 79 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~---ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls 153 (771)
.|+|++|++++..|..+..+++|+.|+|++|++++. .+..+..+++|+.|+|++|++++..|..+ +++|+.|+|+
T Consensus 429 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 508 (606)
T 3t6q_A 429 VLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLS 508 (606)
T ss_dssp EEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred EEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECC
Confidence 888877777777777777777777777777777752 23457777777777777777776666655 6777777777
Q ss_pred CCccccCCCcccccccccceeccCCC
Q 004155 154 YNSFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 154 ~N~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
+|++++..|+.+..++.| .++++.|
T Consensus 509 ~N~l~~~~~~~l~~l~~L-~L~L~~N 533 (606)
T 3t6q_A 509 HNRLTSSSIEALSHLKGI-YLNLASN 533 (606)
T ss_dssp SSCCCGGGGGGGTTCCSC-EEECCSS
T ss_pred CCccCcCChhHhCccccc-EEECcCC
Confidence 777777777777777777 6666544
No 295
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.82 E-value=1.5e-20 Score=204.36 Aligned_cols=174 Identities=17% Similarity=0.138 Sum_probs=91.3
Q ss_pred CCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEcc
Q 004155 4 TLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILR 83 (771)
Q Consensus 4 ~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 83 (771)
+|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++.++..|.++++|++|+|+
T Consensus 53 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 132 (353)
T 2z80_A 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLL 132 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECT
T ss_pred cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECC
Confidence 45556666666553333355555566666666665555445555555556666666555555444445555555556665
Q ss_pred CCcCcccCCh--hhhcCCCCcEEEccCC-CCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCccc
Q 004155 84 SCNVSGKLPD--YLGLMTSLKVLDVSFN-KLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFT 158 (771)
Q Consensus 84 ~N~l~g~~p~--~~~~l~~L~~L~Ls~N-~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~ 158 (771)
+|+++ .+|. .+..+++|++|++++| .+.+..|..|..+++|++|+|++|++++..|..+ +++|+.|++++|.++
T Consensus 133 ~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 133 GNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp TCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred CCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 55555 3443 4555555555555555 2443334445555555555555555554444444 445555555555554
Q ss_pred cCCCcccccccccceeccCC
Q 004155 159 AGSSETSCQYRSVNLFASSS 178 (771)
Q Consensus 159 ~~~p~~~~~l~~L~~l~~s~ 178 (771)
...+..+..+++|+.|+++.
T Consensus 212 ~~~~~~~~~~~~L~~L~L~~ 231 (353)
T 2z80_A 212 LLLEIFVDVTSSVECLELRD 231 (353)
T ss_dssp THHHHHHHHTTTEEEEEEES
T ss_pred cchhhhhhhcccccEEECCC
Confidence 32222233344445444443
No 296
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.81 E-value=1.2e-19 Score=211.33 Aligned_cols=112 Identities=18% Similarity=0.136 Sum_probs=78.6
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
|++|+.|+|++|.|++..|..|+++++|++|+|++|.|++..|..|+++++|++|+|++|.+++.++..|+++++|++|+
T Consensus 74 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 74 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 45677777777777755555677777777777777777766666667777777777777777766666667777777777
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCC
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNG 113 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 113 (771)
|++|.|++..|..|+.+++|+.|+|++|.|++
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 77777776666667777777777777777764
No 297
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.81 E-value=1.2e-20 Score=214.10 Aligned_cols=173 Identities=17% Similarity=0.145 Sum_probs=114.8
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCC-------------
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFP------------- 69 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~------------- 69 (771)
++|+.|+|++|+|++..|..|+.+++|++|+|++|.|++..| |..+++|++|+|++|.+++.++.
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l 111 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNI 111 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcC
Confidence 489999999999997777899999999999999999997666 88999999999999888765422
Q ss_pred ---CccCCCCCcEEEccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCcccc-CCCCCcEEEcCCCcccccCchhhhh
Q 004155 70 ---PLDKMKKMKTLILRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFM-GLLDVDYIYLTGNLLTGTIPPWMLQ 145 (771)
Q Consensus 70 ---~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~l~~L~~L~Ls~N~l~g~iP~~~~~ 145 (771)
....+++|+.|+|++|+|++..|..++.+++|+.|+|++|.|++.+|..+. .+++|+.|+|++|.|++..+...++
T Consensus 112 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~ 191 (487)
T 3oja_A 112 SRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFA 191 (487)
T ss_dssp CCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCT
T ss_pred CCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCC
Confidence 011234555566666666555555555566666666666666655555554 4556666666666665432222255
Q ss_pred cCCeecccCCccccCCCcccccccccceeccCC
Q 004155 146 KGDRVDLSYNSFTAGSSETSCQYRSVNLFASSS 178 (771)
Q Consensus 146 ~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s~ 178 (771)
+|+.|+|++|.+++.+|. +..+++|+.|+++.
T Consensus 192 ~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~ 223 (487)
T 3oja_A 192 KLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRN 223 (487)
T ss_dssp TCCEEECCSSCCCEECGG-GGGGTTCSEEECTT
T ss_pred CCCEEECCCCCCCCCCHh-HcCCCCccEEEecC
Confidence 566666666666653333 55556666665554
No 298
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.81 E-value=4.6e-20 Score=215.29 Aligned_cols=178 Identities=16% Similarity=0.126 Sum_probs=148.5
Q ss_pred CCCCcEEEccCCccccc--CCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCC-CCccCCCCCc
Q 004155 2 LVTLKDFRISDNHFTGK--IPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPF-PPLDKMKKMK 78 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~--ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~ 78 (771)
+++|+.|+|++|++++. +|..+..+++|++|+|++|.++ .+|..|..+++|+.|+|++|++.+.++ ..+.++++|+
T Consensus 349 l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 427 (606)
T 3vq2_A 349 LPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLL 427 (606)
T ss_dssp CTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCC
T ss_pred CCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccCC
Confidence 67888889998888855 4778888888888888888888 467788888888888888888888776 5788888888
Q ss_pred EEEccCCcCcccCChhhhcCCCCcEEEccCCCCCC-CCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCC
Q 004155 79 TLILRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNG-AIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYN 155 (771)
Q Consensus 79 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N 155 (771)
+|+|++|++.+..|..+..+++|+.|+|++|++++ .+|..|..+++|+.|+|++|++++..|..+ +++|+.|+|++|
T Consensus 428 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 507 (606)
T 3vq2_A 428 YLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHN 507 (606)
T ss_dssp EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCC
Confidence 88888888888888888888888888888888886 367788888888888888888887777666 788888888888
Q ss_pred ccccCCCcccccccccceeccCCCC
Q 004155 156 SFTAGSSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 156 ~l~~~~p~~~~~l~~L~~l~~s~~~ 180 (771)
++++..|..++.+++|+.|+++.|.
T Consensus 508 ~l~~~~~~~~~~l~~L~~L~l~~N~ 532 (606)
T 3vq2_A 508 NLLFLDSSHYNQLYSLSTLDCSFNR 532 (606)
T ss_dssp CCSCEEGGGTTTCTTCCEEECTTSC
T ss_pred cCCCcCHHHccCCCcCCEEECCCCc
Confidence 8888888888888888888887553
No 299
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.81 E-value=1.1e-19 Score=195.44 Aligned_cols=173 Identities=17% Similarity=0.241 Sum_probs=153.5
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
+++|++|+|++|+|++..|..|.++++|++|+|++|+|+ .+|..+. ++|+.|++++|++++.++..|.++++|+.|+
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 151 (330)
T 1xku_A 75 LKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVE 151 (330)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEE
Confidence 688999999999999777999999999999999999998 7887664 7999999999999998877899999999999
Q ss_pred ccCCcCc--ccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCcc
Q 004155 82 LRSCNVS--GKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSF 157 (771)
Q Consensus 82 Ls~N~l~--g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l 157 (771)
|++|++. +..+..+..+++|+.|++++|.++ .+|..+. ++|+.|+|++|++++..|..+ +++|+.|+|++|.+
T Consensus 152 l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 228 (330)
T 1xku_A 152 LGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSI 228 (330)
T ss_dssp CCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCC
T ss_pred CCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcC
Confidence 9999996 367788999999999999999998 6776654 789999999999997767766 78899999999999
Q ss_pred ccCCCcccccccccceeccCCCC
Q 004155 158 TAGSSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 158 ~~~~p~~~~~l~~L~~l~~s~~~ 180 (771)
++..+..+..+++|+.|+++.+.
T Consensus 229 ~~~~~~~~~~l~~L~~L~L~~N~ 251 (330)
T 1xku_A 229 SAVDNGSLANTPHLRELHLNNNK 251 (330)
T ss_dssp CEECTTTGGGSTTCCEEECCSSC
T ss_pred ceeChhhccCCCCCCEEECCCCc
Confidence 98888889999999999988653
No 300
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.81 E-value=9.6e-20 Score=196.19 Aligned_cols=175 Identities=15% Similarity=0.123 Sum_probs=131.6
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEc
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLIL 82 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 82 (771)
++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|+++++|++|+|++|+++..++..+ ++|++|+|
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~---~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP---SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSCCSSCC---TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCccCcccc---ccCCEEEC
Confidence 578888888888886656678888888888888888887778888888888888888888876554332 67777777
Q ss_pred cCCcCcccCChhhhcCCCCcEEEccCCCCC--CCCCccccCC--------------------CCCcEEEcCCCcccccCc
Q 004155 83 RSCNVSGKLPDYLGLMTSLKVLDVSFNKLN--GAIPSTFMGL--------------------LDVDYIYLTGNLLTGTIP 140 (771)
Q Consensus 83 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~--g~ip~~~~~l--------------------~~L~~L~Ls~N~l~g~iP 140 (771)
++|++++..+..|..+++|+.|+|++|.++ +..|..+..+ ++|+.|+|++|++++..|
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~ 210 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIEL 210 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCT
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCCcCCccCH
Confidence 777777444455777777777777777774 2344444332 477788888888886555
Q ss_pred hhh--hhcCCeecccCCccccCCCcccccccccceeccCCCC
Q 004155 141 PWM--LQKGDRVDLSYNSFTAGSSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 141 ~~~--~~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s~~~ 180 (771)
..+ +++|+.|+|++|++++..+..+..+++|+.|+++.|.
T Consensus 211 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 252 (332)
T 2ft3_A 211 EDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNK 252 (332)
T ss_dssp TSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSC
T ss_pred HHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCc
Confidence 555 7788999999999998888888888899998887653
No 301
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.81 E-value=1.3e-19 Score=195.19 Aligned_cols=166 Identities=19% Similarity=0.214 Sum_probs=136.7
Q ss_pred CCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEcc
Q 004155 4 TLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILR 83 (771)
Q Consensus 4 ~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 83 (771)
+|+.+++++|+++ .+|..+. ++|+.|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 5899999999999 8998775 799999999999997778899999999999999999999988999999999999999
Q ss_pred CCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCccc--ccCchhh-hhcCCeecccCCccccC
Q 004155 84 SCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLT--GTIPPWM-LQKGDRVDLSYNSFTAG 160 (771)
Q Consensus 84 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~--g~iP~~~-~~~L~~l~ls~N~l~~~ 160 (771)
+|+++ .+|..+. ++|++|+|++|++++..+..|..+++|+.|++++|.++ +..|..+ ..+|+.|++++|.+++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~- 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG- 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSS-
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCc-
Confidence 99999 8887766 89999999999999666667999999999999999996 3445444 1156666666666664
Q ss_pred CCcccccccccceeccCC
Q 004155 161 SSETSCQYRSVNLFASSS 178 (771)
Q Consensus 161 ~p~~~~~l~~L~~l~~s~ 178 (771)
+|..+. ++|+.|+++.
T Consensus 187 l~~~~~--~~L~~L~l~~ 202 (332)
T 2ft3_A 187 IPKDLP--ETLNELHLDH 202 (332)
T ss_dssp CCSSSC--SSCSCCBCCS
T ss_pred cCcccc--CCCCEEECCC
Confidence 333222 3455555543
No 302
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.81 E-value=1.1e-19 Score=211.71 Aligned_cols=175 Identities=18% Similarity=0.163 Sum_probs=125.2
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
+++|+.|+|++|.|++..|..|+++++|++|+|++|.|++..+..|+++++|++|+|++|.+++.+|..|.++++|++|+
T Consensus 98 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 177 (597)
T 3oja_B 98 AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQ 177 (597)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEE
Confidence 67899999999999977777889999999999999999955455578999999999999999999888999999999999
Q ss_pred ccCCcCcccCChhhhcC-------------------------------------CCCcEEEccCCCCCCCCCccccCCCC
Q 004155 82 LRSCNVSGKLPDYLGLM-------------------------------------TSLKVLDVSFNKLNGAIPSTFMGLLD 124 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l-------------------------------------~~L~~L~Ls~N~l~g~ip~~~~~l~~ 124 (771)
|++|+|++.-+..+.++ ++|+.|+|++|.+++ +..+..+++
T Consensus 178 L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~--~~~l~~l~~ 255 (597)
T 3oja_B 178 LSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD--TAWLLNYPG 255 (597)
T ss_dssp CTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCC--CGGGGGCTT
T ss_pred CcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEEECCCCCCCC--ChhhccCCC
Confidence 99999985322222111 124444444444443 234566666
Q ss_pred CcEEEcCCCcccccCchhh--hhcCCeecccCCccccCCCcccccccccceeccCCC
Q 004155 125 VDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 125 L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
|+.|+|++|.+++.+|..+ +++|+.|+|++|.+++ +|..+..+++|+.|+++.|
T Consensus 256 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N 311 (597)
T 3oja_B 256 LVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHN 311 (597)
T ss_dssp CSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSS
T ss_pred CCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCC
Confidence 6666666666666555555 5666666666666665 3444455666666666544
No 303
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.81 E-value=2.5e-19 Score=197.40 Aligned_cols=111 Identities=18% Similarity=0.141 Sum_probs=64.9
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|+++++|++|+|++|+++..++..|.++++|++|+
T Consensus 68 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 68 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEE
Confidence 35566666666666544444556666666666666666655555556666666666666666655544455566666666
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCC
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLN 112 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 112 (771)
|++|++++..|..+..+++|+.|+|++|+++
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLT 178 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCS
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCC
Confidence 6666665444555556666666666666655
No 304
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.81 E-value=1.2e-19 Score=211.94 Aligned_cols=177 Identities=14% Similarity=0.132 Sum_probs=151.2
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEc
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLIL 82 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 82 (771)
++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 57899999999999777778999999999999999999877888999999999999999999988889999999999999
Q ss_pred cCCcCcccCChhhhcCCCCcEEEccCCCCCC-CCCccccCCCCCcEEEcCCCcccccCchhh--hhcCC----eecccCC
Q 004155 83 RSCNVSGKLPDYLGLMTSLKVLDVSFNKLNG-AIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGD----RVDLSYN 155 (771)
Q Consensus 83 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~----~l~ls~N 155 (771)
++|++++..|..++++++|++|+|++|.+++ .+|..|+++++|++|+|++|++++..|..+ +.+|+ .|++++|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 9999986666789999999999999999985 678899999999999999999997666655 55544 7999999
Q ss_pred ccccCCCcccccccccceeccCCCC
Q 004155 156 SFTAGSSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 156 ~l~~~~p~~~~~l~~L~~l~~s~~~ 180 (771)
++++..+..+... +|+.++++.+.
T Consensus 192 ~l~~~~~~~~~~~-~L~~L~L~~n~ 215 (606)
T 3vq2_A 192 PIDFIQDQAFQGI-KLHELTLRGNF 215 (606)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCC
T ss_pred CcceeCcccccCc-eeeeeeccCCc
Confidence 9987766666554 78888887653
No 305
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.81 E-value=2.4e-20 Score=199.02 Aligned_cols=172 Identities=17% Similarity=0.112 Sum_probs=81.9
Q ss_pred CCCCcEEEccCCcccccCC----ccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCC---CCC-CCccC
Q 004155 2 LVTLKDFRISDNHFTGKIP----NFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTE---APF-PPLDK 73 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~-~~~~~ 73 (771)
+++|++|+|++|++++..| ..+..+++|++|+|++|+|++..|..|+.+++|++|+|++|++.+ .++ ..+..
T Consensus 116 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 116 GLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp CBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 3445555555555554333 223345555555555555554444555555555555555555443 111 12244
Q ss_pred CCCCcEEEccCCcCcccCCh----hhhcCCCCcEEEccCCCCCCCCCccccCC---CCCcEEEcCCCcccccCchhhhhc
Q 004155 74 MKKMKTLILRSCNVSGKLPD----YLGLMTSLKVLDVSFNKLNGAIPSTFMGL---LDVDYIYLTGNLLTGTIPPWMLQK 146 (771)
Q Consensus 74 l~~L~~L~Ls~N~l~g~~p~----~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l---~~L~~L~Ls~N~l~g~iP~~~~~~ 146 (771)
+++|++|+|++|+++ .+|. .+..+++|++|+|++|+|++.+|..+..+ ++|++|+|++|+|+ .+|..+.++
T Consensus 196 l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~ 273 (310)
T 4glp_A 196 FPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLPAK 273 (310)
T ss_dssp SCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCCSC
T ss_pred CCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhcCC
Confidence 555555555555554 2222 13444555555555555554444444444 35555555555555 445444445
Q ss_pred CCeecccCCccccCCCcccccccccceeccC
Q 004155 147 GDRVDLSYNSFTAGSSETSCQYRSVNLFASS 177 (771)
Q Consensus 147 L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s 177 (771)
|+.|+|++|++++. |. +..+++|+.|+++
T Consensus 274 L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~ 302 (310)
T 4glp_A 274 LRVLDLSSNRLNRA-PQ-PDELPEVDNLTLD 302 (310)
T ss_dssp CSCEECCSCCCCSC-CC-TTSCCCCSCEECS
T ss_pred CCEEECCCCcCCCC-ch-hhhCCCccEEECc
Confidence 55555555555542 21 3344444444443
No 306
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.80 E-value=9.1e-20 Score=206.47 Aligned_cols=177 Identities=14% Similarity=0.062 Sum_probs=135.5
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
+++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|+.|+
T Consensus 55 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 55 FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 67889999999999877788888999999999999998855555678889999999999998888888888888899999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCcccc
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFTA 159 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~~ 159 (771)
|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+ +++|+.|++++|++.+
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~ 214 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLD 214 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCC
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCcccc
Confidence 98888887777788888888888888888886555567788888888888888775444444 5556666666665555
Q ss_pred CCCcccccccccceeccCC
Q 004155 160 GSSETSCQYRSVNLFASSS 178 (771)
Q Consensus 160 ~~p~~~~~l~~L~~l~~s~ 178 (771)
.+|.......+|+.|+++.
T Consensus 215 ~~~~~~~~~~~L~~L~l~~ 233 (477)
T 2id5_A 215 TMTPNCLYGLNLTSLSITH 233 (477)
T ss_dssp EECTTTTTTCCCSEEEEES
T ss_pred ccCcccccCccccEEECcC
Confidence 5554444444555555543
No 307
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.80 E-value=1.9e-20 Score=203.49 Aligned_cols=171 Identities=12% Similarity=0.099 Sum_probs=151.2
Q ss_pred CcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccC
Q 004155 5 LKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRS 84 (771)
Q Consensus 5 L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 84 (771)
....++++|+++ .+|..+. ++|++|+|++|+|++..+..|.++++|+.|+|++|++++..+..|.++++|++|+|++
T Consensus 33 ~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (353)
T 2z80_A 33 NGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSY 109 (353)
T ss_dssp TSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCC
Confidence 456889999999 8998776 5999999999999976666899999999999999999999888999999999999999
Q ss_pred CcCcccCCh-hhhcCCCCcEEEccCCCCCCCCCc--cccCCCCCcEEEcCCCc-ccccCchhh--hhcCCeecccCCccc
Q 004155 85 CNVSGKLPD-YLGLMTSLKVLDVSFNKLNGAIPS--TFMGLLDVDYIYLTGNL-LTGTIPPWM--LQKGDRVDLSYNSFT 158 (771)
Q Consensus 85 N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~ip~--~~~~l~~L~~L~Ls~N~-l~g~iP~~~--~~~L~~l~ls~N~l~ 158 (771)
|+++ .+|. .+.++++|++|+|++|+++ .+|. .|..+++|++|++++|+ +++..|..+ +++|+.|++++|.++
T Consensus 110 n~l~-~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~ 187 (353)
T 2z80_A 110 NYLS-NLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ 187 (353)
T ss_dssp SCCS-SCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CcCC-cCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcC
Confidence 9999 4555 4899999999999999999 5665 78999999999999995 664445555 788999999999999
Q ss_pred cCCCcccccccccceeccCCCC
Q 004155 159 AGSSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 159 ~~~p~~~~~l~~L~~l~~s~~~ 180 (771)
+..|..+..+++|+.|+++.+.
T Consensus 188 ~~~~~~l~~l~~L~~L~l~~n~ 209 (353)
T 2z80_A 188 SYEPKSLKSIQNVSHLILHMKQ 209 (353)
T ss_dssp EECTTTTTTCSEEEEEEEECSC
T ss_pred ccCHHHHhccccCCeecCCCCc
Confidence 9999999999999999998664
No 308
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.80 E-value=2.1e-19 Score=212.67 Aligned_cols=176 Identities=14% Similarity=0.080 Sum_probs=159.6
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEc
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLIL 82 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 82 (771)
++|++|+|++|+|++..|..|.++++|++|+|++|.+++..|..|++|++|++|+|++|+++..++..|.++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 57999999999999666667999999999999999999888999999999999999999999988888999999999999
Q ss_pred cCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh----hhcCCeecccCCccc
Q 004155 83 RSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM----LQKGDRVDLSYNSFT 158 (771)
Q Consensus 83 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~----~~~L~~l~ls~N~l~ 158 (771)
++|++++..|..|+++++|++|+|++|.+++..|..++++++|++|+|++|++++..|..+ .++|+.|++++|+++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 9999997667889999999999999999999889999999999999999999997666654 378999999999999
Q ss_pred cCCCcccccccccceeccCC
Q 004155 159 AGSSETSCQYRSVNLFASSS 178 (771)
Q Consensus 159 ~~~p~~~~~l~~L~~l~~s~ 178 (771)
+..|..+..+.+|+.++++.
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~ 204 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNN 204 (680)
T ss_dssp CBCTTGGGGSSEECEEECTT
T ss_pred ccChhhhhhhhhhhhhhccc
Confidence 99999888887777766543
No 309
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.80 E-value=2.5e-19 Score=197.36 Aligned_cols=174 Identities=19% Similarity=0.195 Sum_probs=127.7
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCch-hhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPS-GIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTL 80 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 80 (771)
+++|++|+|++|++++..|..|.++++|++|+|++|+|+ .+|. .|.++++|++|+|++|++++.++..|.++++|++|
T Consensus 92 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 170 (390)
T 3o6n_A 92 AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNL 170 (390)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEE
T ss_pred CCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEE
Confidence 678999999999999777778899999999999999999 5555 46899999999999999999888889999999999
Q ss_pred EccCCcCcccCChhhhcC-------------------------------------CCCcEEEccCCCCCCCCCccccCCC
Q 004155 81 ILRSCNVSGKLPDYLGLM-------------------------------------TSLKVLDVSFNKLNGAIPSTFMGLL 123 (771)
Q Consensus 81 ~Ls~N~l~g~~p~~~~~l-------------------------------------~~L~~L~Ls~N~l~g~ip~~~~~l~ 123 (771)
+|++|++++.-...+.++ ++|+.|+|++|++++. ..+..++
T Consensus 171 ~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~--~~l~~l~ 248 (390)
T 3o6n_A 171 QLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYP 248 (390)
T ss_dssp ECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCC--GGGGGCT
T ss_pred ECCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCccc--HHHcCCC
Confidence 999999884321222111 2344555555555532 3466667
Q ss_pred CCcEEEcCCCcccccCchhh--hhcCCeecccCCccccCCCcccccccccceeccCCC
Q 004155 124 DVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 124 ~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
+|+.|+|++|.+++..|..+ +++|+.|+|++|++++ +|..+..+++|+.|+++.+
T Consensus 249 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n 305 (390)
T 3o6n_A 249 GLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHN 305 (390)
T ss_dssp TCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSS
T ss_pred CccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCC
Confidence 77777777777776556655 6677777777777765 3444556667777776654
No 310
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.80 E-value=2e-19 Score=209.98 Aligned_cols=179 Identities=18% Similarity=0.165 Sum_probs=162.7
Q ss_pred CCCCcEEEccCCcccccCCcc-ccCCCcCCEEEcccCCccccC--chhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCc
Q 004155 2 LVTLKDFRISDNHFTGKIPNF-IQNWTLLEKLVIQASGLVGPI--PSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMK 78 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~-~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 78 (771)
+++|+.|+|++|.+++.+|.. +.++++|++|+|++|++++.. |..+..+++|+.|+|++|++.+..+..|.++++|+
T Consensus 324 l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 403 (606)
T 3t6q_A 324 FPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLE 403 (606)
T ss_dssp CTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCS
T ss_pred cCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCC
Confidence 688999999999999888875 899999999999999999765 78899999999999999999999889999999999
Q ss_pred EEEccCCcCcccCChh-hhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCccccc-Cc--hhh--hhcCCeecc
Q 004155 79 TLILRSCNVSGKLPDY-LGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGT-IP--PWM--LQKGDRVDL 152 (771)
Q Consensus 79 ~L~Ls~N~l~g~~p~~-~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~-iP--~~~--~~~L~~l~l 152 (771)
.|+|++|++.+..|.. +..+++|+.|+|++|.+++..|..+..+++|++|+|++|++++. +| ..+ +++|+.|++
T Consensus 404 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~L 483 (606)
T 3t6q_A 404 LLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVL 483 (606)
T ss_dssp EEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEEC
T ss_pred eEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEEC
Confidence 9999999999777654 89999999999999999988899999999999999999999863 22 334 789999999
Q ss_pred cCCccccCCCcccccccccceeccCCCC
Q 004155 153 SYNSFTAGSSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 153 s~N~l~~~~p~~~~~l~~L~~l~~s~~~ 180 (771)
++|++++..|..+..+++|+.|+++.|.
T Consensus 484 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 511 (606)
T 3t6q_A 484 SFCDLSSIDQHAFTSLKMMNHVDLSHNR 511 (606)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCccCccChhhhccccCCCEEECCCCc
Confidence 9999999999999999999999998663
No 311
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.80 E-value=2.5e-19 Score=217.17 Aligned_cols=178 Identities=16% Similarity=0.086 Sum_probs=162.2
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccC-chhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPI-PSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTL 80 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 80 (771)
+++|+.|+|++|+|++..|..|.++++|++|+|++|.+.+.+ |..|.+|++|++|+|++|++++..|..|.++++|++|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 578999999999999888999999999999999999777676 8889999999999999999999999999999999999
Q ss_pred EccCCcCcccCChh--hhcCCCCcEEEccCCCCCCCCC-ccccCCCCCcEEEcCCCcccccCchhh--h--hcCCeeccc
Q 004155 81 ILRSCNVSGKLPDY--LGLMTSLKVLDVSFNKLNGAIP-STFMGLLDVDYIYLTGNLLTGTIPPWM--L--QKGDRVDLS 153 (771)
Q Consensus 81 ~Ls~N~l~g~~p~~--~~~l~~L~~L~Ls~N~l~g~ip-~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~--~~L~~l~ls 153 (771)
+|++|++++.+|.. |.++++|++|+|++|.+++..| ..|+++++|++|+|++|++++..|..+ + ++|+.|+|+
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 99999999877765 9999999999999999997655 579999999999999999998888877 4 789999999
Q ss_pred CCccccCCCcccccccc------cceeccCCC
Q 004155 154 YNSFTAGSSETSCQYRS------VNLFASSSK 179 (771)
Q Consensus 154 ~N~l~~~~p~~~~~l~~------L~~l~~s~~ 179 (771)
+|.+++..|..+..+.+ |+.|+++.+
T Consensus 183 ~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n 214 (844)
T 3j0a_A 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGN 214 (844)
T ss_dssp CSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSC
T ss_pred CCccccccccchhhcCCccccCceeEEecCCC
Confidence 99999998887776665 888988866
No 312
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=1.9e-19 Score=196.35 Aligned_cols=168 Identities=16% Similarity=0.114 Sum_probs=136.7
Q ss_pred cEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhc-CCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccC
Q 004155 6 KDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIA-SLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRS 84 (771)
Q Consensus 6 ~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 84 (771)
+.+++++|+|+ .+|..+. +.|+.|+|++|+|++..+..|. ++++|+.|+|++|+++++++..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 57888889888 7887665 4688899999999876677777 888999999999999888888888899999999999
Q ss_pred CcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh------hhcCCeecccCCccc
Q 004155 85 CNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM------LQKGDRVDLSYNSFT 158 (771)
Q Consensus 85 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~------~~~L~~l~ls~N~l~ 158 (771)
|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+ .+|..+ +++|+.|+|++|+|+
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 9998666667888899999999999998777888888999999999999998 466543 678888999999998
Q ss_pred cCCCccccccccc--ceeccC
Q 004155 159 AGSSETSCQYRSV--NLFASS 177 (771)
Q Consensus 159 ~~~p~~~~~l~~L--~~l~~s 177 (771)
...+..+..++.+ +.++++
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~ 197 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLH 197 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECC
T ss_pred ccCHHHhhhccHhhcceEEec
Confidence 7666777777664 445443
No 313
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=2.5e-19 Score=181.15 Aligned_cols=139 Identities=16% Similarity=0.203 Sum_probs=129.3
Q ss_pred CCCcEEEccCCcccccCCc-cccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 3 VTLKDFRISDNHFTGKIPN-FIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
..++.|+|++|+|++..|. .|.++++|++|+|++|+|++..|..|.++++|+.|+|++|++++.++..|.++++|++|+
T Consensus 32 ~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 111 (220)
T 2v70_A 32 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLM 111 (220)
T ss_dssp TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEE
T ss_pred CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEE
Confidence 4689999999999966554 588999999999999999988788999999999999999999999988899999999999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCch
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPP 141 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~ 141 (771)
|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|.+++..+.
T Consensus 112 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 112 LRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp CTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred CCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 999999988899999999999999999999988899999999999999999999987763
No 314
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.79 E-value=4.5e-19 Score=188.89 Aligned_cols=165 Identities=18% Similarity=0.263 Sum_probs=131.0
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
|++|+.|++++|+++ .+| .+..+++|++|+|++|++++ ++. +..+++|+.|+|++|++++. +.+..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEE
Confidence 457888889888888 666 58888889999999888884 554 88888899999988888875 3688888888899
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh-hhcCCeecccCCccccC
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM-LQKGDRVDLSYNSFTAG 160 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~-~~~L~~l~ls~N~l~~~ 160 (771)
|++|++++ +|. +..+++|+.|+|++|++++. +. +..+++|+.|+|++|++++ +|... +++|+.|++++|++++.
T Consensus 114 l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~l~~n~l~~~ 188 (308)
T 1h6u_A 114 LTSTQITD-VTP-LAGLSNLQVLYLDLNQITNI-SP-LAGLTNLQYLSIGNAQVSD-LTPLANLSKLTTLKADDNKISDI 188 (308)
T ss_dssp CTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEECCSSCCCC-CGGGTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCCC-chh-hcCCCCCCEEECCCCccCcC-cc-ccCCCCccEEEccCCcCCC-ChhhcCCCCCCEEECCCCccCcC
Confidence 98888884 543 88888888888888888844 43 7888888888888888884 44422 77888888888888865
Q ss_pred CCcccccccccceeccCCC
Q 004155 161 SSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 161 ~p~~~~~l~~L~~l~~s~~ 179 (771)
.+ +..+++|+.|+++.|
T Consensus 189 ~~--l~~l~~L~~L~L~~N 205 (308)
T 1h6u_A 189 SP--LASLPNLIEVHLKNN 205 (308)
T ss_dssp GG--GGGCTTCCEEECTTS
T ss_pred hh--hcCCCCCCEEEccCC
Confidence 54 777888888888755
No 315
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.79 E-value=3.5e-19 Score=176.02 Aligned_cols=158 Identities=14% Similarity=0.116 Sum_probs=136.8
Q ss_pred cEEEccCCcccccCCccccCCCcCCEEEcccCCccccCch-hhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccC
Q 004155 6 KDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPS-GIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRS 84 (771)
Q Consensus 6 ~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 84 (771)
+.|++++|+|+ .+|..+.. +|++|+|++|+|++..+. .|+.+++|+.|+|++|++++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 68999999998 99987764 999999999999966664 489999999999999999999999999999999999999
Q ss_pred CcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh-hhcCCeecccCCccccCCCc
Q 004155 85 CNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM-LQKGDRVDLSYNSFTAGSSE 163 (771)
Q Consensus 85 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~-~~~L~~l~ls~N~l~~~~p~ 163 (771)
|+|++..|..|..+++|++|+|++|+|++.+|..|..+++|++|+|++|.+++..+... ...++...+..+...+..|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSST
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCCh
Confidence 99998888889999999999999999999999999999999999999999998877433 33344445566666666665
Q ss_pred ccc
Q 004155 164 TSC 166 (771)
Q Consensus 164 ~~~ 166 (771)
.+.
T Consensus 168 ~l~ 170 (192)
T 1w8a_A 168 KVR 170 (192)
T ss_dssp TTT
T ss_pred HHc
Confidence 543
No 316
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=5.8e-19 Score=178.42 Aligned_cols=138 Identities=18% Similarity=0.230 Sum_probs=128.3
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEc
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLIL 82 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 82 (771)
++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+++.+++..|.++++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 57999999999999666668999999999999999999888999999999999999999999998888999999999999
Q ss_pred cCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCc
Q 004155 83 RSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIP 140 (771)
Q Consensus 83 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP 140 (771)
++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+...-+
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 9999998888999999999999999999997777789999999999999999985443
No 317
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.79 E-value=1.5e-18 Score=173.69 Aligned_cols=154 Identities=18% Similarity=0.143 Sum_probs=135.6
Q ss_pred cEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCC
Q 004155 6 KDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSC 85 (771)
Q Consensus 6 ~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 85 (771)
+.++.++++++ .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|++++.++..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGIP--AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCCC--CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 57889999999 8887664 69999999999999766777899999999999999999988888999999999999999
Q ss_pred cCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCccccCCC
Q 004155 86 NVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFTAGSS 162 (771)
Q Consensus 86 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~~~~p 162 (771)
+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+..+ +++|+.|+|++|++.+..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 9996666668999999999999999997767678999999999999999995444434 7899999999999986544
No 318
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.79 E-value=3.8e-19 Score=176.53 Aligned_cols=151 Identities=15% Similarity=0.175 Sum_probs=118.0
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
+++|+.|+|++|+|+ .+| .+..+++|++|+|++|.++ . +..+..+++|++|+|++|++++..+..+..+++|++|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 457888888888888 777 5888888888888888765 3 34788888888888888888876677888888888888
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCC-CCCCCCccccCCCCCcEEEcCCCcccccCchhh-hhcCCeecccCCcccc
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNK-LNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM-LQKGDRVDLSYNSFTA 159 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~-~~~L~~l~ls~N~l~~ 159 (771)
|++|++++..|..++.+++|+.|+|++|. ++ .+| .+..+++|+.|+|++|++++ ++... +++|+.|++++|++.+
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CTTGGGCSSCCEEEECBC----
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hHHhccCCCCCEEEeeCcccCC
Confidence 88888887778888888888888888887 54 666 58888888888888888884 54222 7788888888888753
No 319
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.79 E-value=3.7e-19 Score=182.16 Aligned_cols=171 Identities=16% Similarity=0.116 Sum_probs=143.6
Q ss_pred CCCCcEEEccCCc-ccccCCccccCCCcCCEEEccc-CCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCc-
Q 004155 2 LVTLKDFRISDNH-FTGKIPNFIQNWTLLEKLVIQA-SGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMK- 78 (771)
Q Consensus 2 L~~L~~L~Ls~N~-l~~~ip~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~- 78 (771)
+++|+.|+|++|+ +++..+..|.++++|++|+|++ |+|++..+..|.++++|+.|+|++|++++.+ . |..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~lp-~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKMFP-D-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCSCC-C-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcccc-c-ccccccccc
Confidence 6889999999997 8844455899999999999999 9999766788999999999999999999854 3 88888888
Q ss_pred --EEEccCC-cCcccCChhhhcCCCCc-EEEccCCCCCCCCCccccCCCCCcEEEcCCCc-ccccCchhh--h-hcCCee
Q 004155 79 --TLILRSC-NVSGKLPDYLGLMTSLK-VLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNL-LTGTIPPWM--L-QKGDRV 150 (771)
Q Consensus 79 --~L~Ls~N-~l~g~~p~~~~~l~~L~-~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~-l~g~iP~~~--~-~~L~~l 150 (771)
+|+|++| ++++..+..|..+++|+ .|+|++|+++ .+|......++|+.|+|++|+ +++..+..+ + ++|+.|
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L 210 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLL 210 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEE
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEE
Confidence 9999999 99966666799999999 9999999999 777665455899999999995 994434445 5 899999
Q ss_pred cccCCccccCCCcccccccccceeccCC
Q 004155 151 DLSYNSFTAGSSETSCQYRSVNLFASSS 178 (771)
Q Consensus 151 ~ls~N~l~~~~p~~~~~l~~L~~l~~s~ 178 (771)
++++|++++..+. .+++|+.|.++.
T Consensus 211 ~l~~N~l~~l~~~---~~~~L~~L~l~~ 235 (239)
T 2xwt_C 211 DVSQTSVTALPSK---GLEHLKELIARN 235 (239)
T ss_dssp ECTTCCCCCCCCT---TCTTCSEEECTT
T ss_pred ECCCCccccCChh---HhccCceeeccC
Confidence 9999999975555 456666666553
No 320
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.79 E-value=6e-19 Score=204.09 Aligned_cols=177 Identities=16% Similarity=0.159 Sum_probs=156.2
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEc
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLIL 82 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 82 (771)
++|+.|+|++|+|++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|+++..++..|.++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 57899999999999777778999999999999999999877888999999999999999999998889999999999999
Q ss_pred cCCcCcccCChhhhcCCCCcEEEccCCCCCC-CCCccccCCCCCcEEEcCCCcccccCchhh--hhcC----CeecccCC
Q 004155 83 RSCNVSGKLPDYLGLMTSLKVLDVSFNKLNG-AIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKG----DRVDLSYN 155 (771)
Q Consensus 83 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L----~~l~ls~N 155 (771)
++|++++..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..|..+ +.+| ..|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 9999995444479999999999999999986 479999999999999999999997666666 7777 78999999
Q ss_pred ccccCCCcccccccccceeccCCCC
Q 004155 156 SFTAGSSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 156 ~l~~~~p~~~~~l~~L~~l~~s~~~ 180 (771)
.+++..|..+..+ +|+.++++.+.
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~n~ 211 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRNNF 211 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCC
T ss_pred CceecCHHHhccC-cceeEeccccc
Confidence 9999888877766 78888887653
No 321
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=6.7e-19 Score=191.94 Aligned_cols=157 Identities=16% Similarity=0.139 Sum_probs=137.2
Q ss_pred CCCCcEEEccCCcccccCCcccc-CCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQ-NWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTL 80 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 80 (771)
...|+.|+|++|+|++..+..+. ++++|+.|+|++|+|++..|..|.++++|+.|+|++|+++..++..|.++++|++|
T Consensus 38 ~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 117 (361)
T 2xot_A 38 PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVL 117 (361)
T ss_dssp CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEE
Confidence 35689999999999966666677 89999999999999998778889999999999999999999988899999999999
Q ss_pred EccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCcc-c---cCCCCCcEEEcCCCcccccCchhh---hhc--CCeec
Q 004155 81 ILRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPST-F---MGLLDVDYIYLTGNLLTGTIPPWM---LQK--GDRVD 151 (771)
Q Consensus 81 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~-~---~~l~~L~~L~Ls~N~l~g~iP~~~---~~~--L~~l~ 151 (771)
+|++|+|++..|..|..+++|+.|+|++|+|+ .+|.. | ..+++|+.|+|++|+|+ .+|... ++. ++.|+
T Consensus 118 ~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~~~l~~l~ 195 (361)
T 2xot_A 118 LLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLK-KLPLTDLQKLPAWVKNGLY 195 (361)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----CTTCCEEECCSSCCC-CCCHHHHHHSCHHHHTTEE
T ss_pred ECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCCEEECCCCCCC-ccCHHHhhhccHhhcceEE
Confidence 99999999888899999999999999999999 46655 4 67999999999999999 566443 333 47899
Q ss_pred ccCCccccC
Q 004155 152 LSYNSFTAG 160 (771)
Q Consensus 152 ls~N~l~~~ 160 (771)
|++|++.+.
T Consensus 196 l~~N~~~C~ 204 (361)
T 2xot_A 196 LHNNPLECD 204 (361)
T ss_dssp CCSSCEECC
T ss_pred ecCCCccCC
Confidence 999999863
No 322
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.78 E-value=2.1e-19 Score=208.02 Aligned_cols=176 Identities=16% Similarity=0.171 Sum_probs=113.3
Q ss_pred CCCCcEEEccCCcccccC--CccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCC-CCccCCCCCc
Q 004155 2 LVTLKDFRISDNHFTGKI--PNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPF-PPLDKMKKMK 78 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~i--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~ 78 (771)
+++|+.|+|++|++++.. |..+.++++|++|+|++|.+++ +|..+..+++|+.|+|++|++.+.++ ..+.++++|+
T Consensus 346 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 424 (570)
T 2z63_A 346 LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 424 (570)
T ss_dssp CTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCC
T ss_pred CCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccc-ccccccccCCCCEEEccCCccccccchhhhhcCCCCC
Confidence 455666666666666332 4556666666666666666663 33336666666666666666666544 3466666777
Q ss_pred EEEccCCcCcccCChhhhcCCCCcEEEccCCCCC-CCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCC
Q 004155 79 TLILRSCNVSGKLPDYLGLMTSLKVLDVSFNKLN-GAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYN 155 (771)
Q Consensus 79 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N 155 (771)
+|+|++|++.+..|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+|++|++++..|..+ +++|+.|++++|
T Consensus 425 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 504 (570)
T 2z63_A 425 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASN 504 (570)
T ss_dssp EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCC
Confidence 7777777766666666666677777777777665 4566666666777777777777765556555 566677777777
Q ss_pred ccccCCCcccccccccceeccCC
Q 004155 156 SFTAGSSETSCQYRSVNLFASSS 178 (771)
Q Consensus 156 ~l~~~~p~~~~~l~~L~~l~~s~ 178 (771)
++++.+|..+..+++|+.++++.
T Consensus 505 ~l~~~~~~~~~~l~~L~~L~l~~ 527 (570)
T 2z63_A 505 QLKSVPDGIFDRLTSLQKIWLHT 527 (570)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCS
T ss_pred cCCCCCHHHhhcccCCcEEEecC
Confidence 77666666666666666666653
No 323
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.78 E-value=5.1e-19 Score=204.66 Aligned_cols=172 Identities=21% Similarity=0.219 Sum_probs=83.3
Q ss_pred CCCcEEEccCCcccccCCccc-----cCCCc--------------------------CCEEEcccCCccccCchhhcCCc
Q 004155 3 VTLKDFRISDNHFTGKIPNFI-----QNWTL--------------------------LEKLVIQASGLVGPIPSGIASLS 51 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~-----~~l~~--------------------------L~~L~L~~N~l~~~~p~~~~~l~ 51 (771)
++|++|++++|+++|.+|..+ .+++. |+.|++++|++.. ++ ....++
T Consensus 276 ~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~-~~-~~~~l~ 353 (562)
T 3a79_B 276 RPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIH-MV-CPPSPS 353 (562)
T ss_dssp SSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCC-CC-CCSSCC
T ss_pred ccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCccc-cc-CccCCC
Confidence 478888899998888888766 22222 2222222222221 00 003444
Q ss_pred CCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCCcCcc--cCChhhhcCCCCcEEEccCCCCCCCCCcc-ccCCCCCcEE
Q 004155 52 KLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSCNVSG--KLPDYLGLMTSLKVLDVSFNKLNGAIPST-FMGLLDVDYI 128 (771)
Q Consensus 52 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~-~~~l~~L~~L 128 (771)
+|++|+|++|++++..|..+.++++|++|+|++|++++ .+|..+.++++|+.|+|++|++++.+|.. +..+++|+.|
T Consensus 354 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L 433 (562)
T 3a79_B 354 SFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVL 433 (562)
T ss_dssp CCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEE
T ss_pred CceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEE
Confidence 55555555555555444445555555555555555542 12233445555555555555555433332 4444555555
Q ss_pred EcCCCcccccCchhhhhcCCeecccCCccccCCCcccccccccceeccC
Q 004155 129 YLTGNLLTGTIPPWMLQKGDRVDLSYNSFTAGSSETSCQYRSVNLFASS 177 (771)
Q Consensus 129 ~Ls~N~l~g~iP~~~~~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s 177 (771)
+|++|++++.+|..+.++|+.|+|++|+++ .+|..+..+++|+.|+++
T Consensus 434 ~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~ 481 (562)
T 3a79_B 434 NLSSNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVA 481 (562)
T ss_dssp ECCSSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECC
T ss_pred ECCCCCCCcchhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCEEECC
Confidence 555555544444333344555555555554 233333344455555444
No 324
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=1.5e-18 Score=176.53 Aligned_cols=138 Identities=22% Similarity=0.242 Sum_probs=127.9
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
.++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|++++.++..|..+++|++|+
T Consensus 39 ~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~ 118 (229)
T 3e6j_A 39 PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELF 118 (229)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEe
Confidence 46899999999999988888999999999999999999855566789999999999999999999888899999999999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCc
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIP 140 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP 140 (771)
|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+.+..+
T Consensus 119 Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 119 MCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred ccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 9999999 899999999999999999999996666779999999999999999997665
No 325
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.78 E-value=2.2e-19 Score=203.70 Aligned_cols=172 Identities=11% Similarity=0.073 Sum_probs=142.3
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCch----------------hhcCCcCCCEEEcCCCCCCC
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPS----------------GIASLSKLTDLRISDLNGTE 65 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~----------------~~~~l~~L~~L~L~~n~l~~ 65 (771)
|++|+.|+|++|.|++..| ++.+++|++|+|++|.|++..+. ....+++|+.|+|++|++++
T Consensus 57 l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~ 134 (487)
T 3oja_A 57 FTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITM 134 (487)
T ss_dssp CTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCS
T ss_pred CCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCCC
Confidence 6788888888888886554 77888888888877777632211 01236788999999999999
Q ss_pred CCCCCccCCCCCcEEEccCCcCcccCChhhh-cCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh-
Q 004155 66 APFPPLDKMKKMKTLILRSCNVSGKLPDYLG-LMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM- 143 (771)
Q Consensus 66 ~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~- 143 (771)
.+|..|+++++|+.|+|++|+|++..|..+. .+++|+.|+|++|.|++. |. +..+++|+.|+|++|+|++ +|+.+
T Consensus 135 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-~~~~~~ 211 (487)
T 3oja_A 135 LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQ 211 (487)
T ss_dssp GGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGG
T ss_pred CCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCC-CCHhHc
Confidence 8888999999999999999999998898886 799999999999999965 33 4569999999999999996 44445
Q ss_pred -hhcCCeecccCCccccCCCcccccccccceeccCCC
Q 004155 144 -LQKGDRVDLSYNSFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 144 -~~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
+++|+.|+|++|.+++ +|..+..+++|+.++++.|
T Consensus 212 ~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N 247 (487)
T 3oja_A 212 SAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGN 247 (487)
T ss_dssp GGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTC
T ss_pred CCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCC
Confidence 8899999999999996 6777888999999988644
No 326
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.78 E-value=5.5e-19 Score=206.76 Aligned_cols=162 Identities=17% Similarity=0.182 Sum_probs=104.0
Q ss_pred CCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEcc
Q 004155 4 TLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILR 83 (771)
Q Consensus 4 ~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 83 (771)
++++|||++|+|++..|..|.++++|++|+|++|+|++..|.+|.+|++|++|+|++|++++.++..|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 56677777777764444566777777777777777765555666777777777777777766666666777777777777
Q ss_pred CCcCcccCChhhhcCCCCcEEEccCCCCCC-CCCccccCCCCCcEEEcCCCcccccCchhh--hhcC----CeecccCCc
Q 004155 84 SCNVSGKLPDYLGLMTSLKVLDVSFNKLNG-AIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKG----DRVDLSYNS 156 (771)
Q Consensus 84 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L----~~l~ls~N~ 156 (771)
+|+|++..+..|+++++|++|+|++|.+++ .+|..++.+++|++|+|++|+|++..|..+ +.++ ..++++.|.
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~ 212 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 212 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCc
Confidence 777764444456677777777777777653 345666667777777777777765555444 3332 346666666
Q ss_pred cccCCCccc
Q 004155 157 FTAGSSETS 165 (771)
Q Consensus 157 l~~~~p~~~ 165 (771)
++...+..+
T Consensus 213 l~~i~~~~~ 221 (635)
T 4g8a_A 213 MNFIQPGAF 221 (635)
T ss_dssp CCEECTTTT
T ss_pred ccccCcccc
Confidence 665544433
No 327
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.78 E-value=6.2e-19 Score=201.83 Aligned_cols=174 Identities=20% Similarity=0.209 Sum_probs=148.6
Q ss_pred CCCcEEEccCCcccccCCccc-----cCCCcCCEEEcccCCccccCc-hhh-------------------------cCCc
Q 004155 3 VTLKDFRISDNHFTGKIPNFI-----QNWTLLEKLVIQASGLVGPIP-SGI-------------------------ASLS 51 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~-------------------------~~l~ 51 (771)
++|+.|+|++|+++|.+|..+ +++++|+.|++++|.+ .+| ..+ ..++
T Consensus 247 ~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~ 324 (520)
T 2z7x_B 247 TTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKIS 324 (520)
T ss_dssp SSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCC
T ss_pred CcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCC
Confidence 489999999999999999988 8888888888888887 455 221 6788
Q ss_pred CCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCCcCcc--cCChhhhcCCCCcEEEccCCCCCCCCCcc-ccCCCCCcEE
Q 004155 52 KLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSCNVSG--KLPDYLGLMTSLKVLDVSFNKLNGAIPST-FMGLLDVDYI 128 (771)
Q Consensus 52 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~-~~~l~~L~~L 128 (771)
+|++|+|++|++++..|..+.++++|++|+|++|++++ .+|..+..+++|++|+|++|++++.+|.. +..+++|+.|
T Consensus 325 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L 404 (520)
T 2z7x_B 325 PFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSL 404 (520)
T ss_dssp CCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEE
T ss_pred cccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEE
Confidence 99999999999999888889999999999999999986 56678899999999999999999767765 7888999999
Q ss_pred EcCCCcccccCchhhhhcCCeecccCCccccCCCcccccccccceeccCCC
Q 004155 129 YLTGNLLTGTIPPWMLQKGDRVDLSYNSFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 129 ~Ls~N~l~g~iP~~~~~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
+|++|++++.+|..+.++|+.|+|++|+++ .+|..+..+++|+.|+++.|
T Consensus 405 ~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N 454 (520)
T 2z7x_B 405 NMSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASN 454 (520)
T ss_dssp ECCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSS
T ss_pred ECcCCCCCcchhhhhcccCCEEECCCCccc-ccchhhhcCCCCCEEECCCC
Confidence 999999988888776678999999999998 67777778999999988765
No 328
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.78 E-value=1.2e-19 Score=194.08 Aligned_cols=174 Identities=16% Similarity=0.146 Sum_probs=110.2
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCC------------
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFP------------ 69 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~------------ 69 (771)
+++|++|+|++|+|++..|..|.++++|++|+|++|++++..| |..+++|++|+|++|++++.++.
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~ 110 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNN 110 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSC
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccCCCCcCEEECCCCc
Confidence 4589999999999997666789999999999999999986555 88899999999999888764321
Q ss_pred ----CccCCCCCcEEEccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCcccc-CCCCCcEEEcCCCcccccCchhh-
Q 004155 70 ----PLDKMKKMKTLILRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFM-GLLDVDYIYLTGNLLTGTIPPWM- 143 (771)
Q Consensus 70 ----~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~l~~L~~L~Ls~N~l~g~iP~~~- 143 (771)
....+++|++|+|++|++++..|..++.+++|++|+|++|.+++..|..+. .+++|++|+|++|++++ +|...
T Consensus 111 l~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~ 189 (317)
T 3o53_A 111 ISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKGQVV 189 (317)
T ss_dssp CSEEEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EECCCC
T ss_pred cCCcCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-cccccc
Confidence 011234455555555555544444555555555666666555544444442 45555666666665553 23222
Q ss_pred hhcCCeecccCCccccCCCcccccccccceeccCCC
Q 004155 144 LQKGDRVDLSYNSFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 144 ~~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
+++|+.|+|++|++++..+ .+..+++|+.|+++.|
T Consensus 190 l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N 224 (317)
T 3o53_A 190 FAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNN 224 (317)
T ss_dssp CTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTS
T ss_pred cccCCEEECCCCcCCcchh-hhcccCcccEEECcCC
Confidence 5555666666666554332 3555555555555543
No 329
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.78 E-value=1.1e-19 Score=209.62 Aligned_cols=169 Identities=14% Similarity=0.128 Sum_probs=95.3
Q ss_pred EEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCCcC
Q 004155 8 FRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSCNV 87 (771)
Q Consensus 8 L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 87 (771)
.++++|+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++.++..|.++++|++|+|++|++
T Consensus 10 c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 86 (549)
T 2z81_A 10 CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHL 86 (549)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCcc
Confidence 455555555 5555443 4566666666666555555566666666666666666655555556666666666666666
Q ss_pred cccCChhhhcCCCCcEEEccCCCCCC-CCCccccCCCCCcEEEcCCCcccccCch-hh--hhcCCeecccCCccccCCCc
Q 004155 88 SGKLPDYLGLMTSLKVLDVSFNKLNG-AIPSTFMGLLDVDYIYLTGNLLTGTIPP-WM--LQKGDRVDLSYNSFTAGSSE 163 (771)
Q Consensus 88 ~g~~p~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~l~~L~~L~Ls~N~l~g~iP~-~~--~~~L~~l~ls~N~l~~~~p~ 163 (771)
++..|..|+++++|++|+|++|++++ .+|..++++++|++|+|++|++.+.+|. .+ +++|+.|++++|.+++..|.
T Consensus 87 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 166 (549)
T 2z81_A 87 SSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ 166 (549)
T ss_dssp CSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred CccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChh
Confidence 54444445566666666666666553 2344555566666666666654334442 22 45555566666666655555
Q ss_pred ccccccccceeccCCC
Q 004155 164 TSCQYRSVNLFASSSK 179 (771)
Q Consensus 164 ~~~~l~~L~~l~~s~~ 179 (771)
.+..+++|+.|+++.+
T Consensus 167 ~l~~l~~L~~L~l~~n 182 (549)
T 2z81_A 167 SLKSIRDIHHLTLHLS 182 (549)
T ss_dssp TTTTCSEEEEEEEECS
T ss_pred hhhccccCceEecccC
Confidence 5555555555555443
No 330
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.77 E-value=1.5e-18 Score=184.78 Aligned_cols=166 Identities=18% Similarity=0.287 Sum_probs=144.7
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
+++|+.|+|++|+++ .++. +..+++|++|+|++|++++ +| .+..+++|+.|+|++|++++.+ .+..+++|++|+
T Consensus 62 l~~L~~L~L~~n~i~-~~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~ 135 (308)
T 1h6u_A 62 LNNLIGLELKDNQIT-DLAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLY 135 (308)
T ss_dssp CTTCCEEECCSSCCC-CCGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEE
T ss_pred cCCCCEEEccCCcCC-CChh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCCch--hhcCCCCCCEEE
Confidence 689999999999999 5666 9999999999999999985 55 6999999999999999999864 389999999999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhhhhcCCeecccCCccccCC
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWMLQKGDRVDLSYNSFTAGS 161 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~L~~l~ls~N~l~~~~ 161 (771)
|++|++++ ++. +..+++|+.|+|++|++++ ++. +..+++|+.|+|++|++++..|-.-+++|+.|+|++|++++..
T Consensus 136 l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~ 211 (308)
T 1h6u_A 136 LDLNQITN-ISP-LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVS 211 (308)
T ss_dssp CCSSCCCC-CGG-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBCG
T ss_pred CCCCccCc-Ccc-ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCccc
Confidence 99999994 444 8999999999999999995 554 9999999999999999995433222889999999999999766
Q ss_pred CcccccccccceeccCCC
Q 004155 162 SETSCQYRSVNLFASSSK 179 (771)
Q Consensus 162 p~~~~~l~~L~~l~~s~~ 179 (771)
| +..+++|+.|+++.|
T Consensus 212 ~--l~~l~~L~~L~l~~N 227 (308)
T 1h6u_A 212 P--LANTSNLFIVTLTNQ 227 (308)
T ss_dssp G--GTTCTTCCEEEEEEE
T ss_pred c--ccCCCCCCEEEccCC
Confidence 4 788999999988644
No 331
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=1.5e-18 Score=183.20 Aligned_cols=166 Identities=20% Similarity=0.274 Sum_probs=143.7
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
|++|+.|++++|.++ .+|. +..+++|++|+|++|++++ ++. +..+++|+.|+|++|++++. +.+..+++|++|+
T Consensus 45 l~~L~~L~l~~~~i~-~~~~-~~~l~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 118 (291)
T 1h6t_A 45 LNSIDQIIANNSDIK-SVQG-IQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKVKDL--SSLKDLKKLKSLS 118 (291)
T ss_dssp HHTCCEEECTTSCCC-CCTT-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCG--GGGTTCTTCCEEE
T ss_pred cCcccEEEccCCCcc-cChh-HhcCCCCCEEEccCCccCC-Ccc-cccCCCCCEEECCCCcCCCC--hhhccCCCCCEEE
Confidence 467999999999998 6665 8999999999999999995 444 99999999999999999885 3599999999999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhhhhcCCeecccCCccccCC
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWMLQKGDRVDLSYNSFTAGS 161 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~L~~l~ls~N~l~~~~ 161 (771)
|++|++++ + ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++..|-.-+++|+.|+|++|.++..
T Consensus 119 L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~l- 193 (291)
T 1h6t_A 119 LEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL- 193 (291)
T ss_dssp CTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC-
T ss_pred CCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCCC-
Confidence 99999995 4 5789999999999999999954 57999999999999999999654522288999999999999974
Q ss_pred CcccccccccceeccCCC
Q 004155 162 SETSCQYRSVNLFASSSK 179 (771)
Q Consensus 162 p~~~~~l~~L~~l~~s~~ 179 (771)
| .+..+++|+.|+++.|
T Consensus 194 ~-~l~~l~~L~~L~l~~n 210 (291)
T 1h6t_A 194 R-ALAGLKNLDVLELFSQ 210 (291)
T ss_dssp G-GGTTCTTCSEEEEEEE
T ss_pred h-hhccCCCCCEEECcCC
Confidence 4 3888999999988754
No 332
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.77 E-value=2.2e-18 Score=203.92 Aligned_cols=177 Identities=16% Similarity=0.201 Sum_probs=125.1
Q ss_pred CCCCcEEEccCCcccccCC-ccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCC--CCCCCCccCCCCCc
Q 004155 2 LVTLKDFRISDNHFTGKIP-NFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGT--EAPFPPLDKMKKMK 78 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~--~~~~~~~~~l~~L~ 78 (771)
+++|+.|+|++|++++.+| ..|.++++|++|+|++|++++..+..|..+++|+.|++++|.+. +..|..|.++++|+
T Consensus 404 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~ 483 (680)
T 1ziw_A 404 LGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLT 483 (680)
T ss_dssp CTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCC
T ss_pred CCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCC
Confidence 5788899999999887777 57888888888888888887766777777777777777777665 34556677777777
Q ss_pred EEEccCCcCcccCChhhhcCCCCcEEEccCCCCCCCC----C----ccccCCCCCcEEEcCCCcccccCchh-h--hhcC
Q 004155 79 TLILRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAI----P----STFMGLLDVDYIYLTGNLLTGTIPPW-M--LQKG 147 (771)
Q Consensus 79 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i----p----~~~~~l~~L~~L~Ls~N~l~g~iP~~-~--~~~L 147 (771)
.|+|++|+|++..|..|..+++|++|+|++|++++.. | ..|..+++|+.|+|++|+|+ .+|.. + +++|
T Consensus 484 ~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L 562 (680)
T 1ziw_A 484 ILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFEL 562 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTC
T ss_pred EEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHHHcccccCc
Confidence 7777777777555556777777777777777776321 1 12566777777777777777 55543 3 5667
Q ss_pred CeecccCCccccCCCcccccccccceeccCCC
Q 004155 148 DRVDLSYNSFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 148 ~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
+.|+|++|++++..+..+..+++|+.|+++.|
T Consensus 563 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N 594 (680)
T 1ziw_A 563 KIIDLGLNNLNTLPASVFNNQVSLKSLNLQKN 594 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred ceeECCCCCCCcCCHhHhCCCCCCCEEECCCC
Confidence 77777777777666666667777777776654
No 333
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.77 E-value=3.2e-19 Score=184.93 Aligned_cols=136 Identities=18% Similarity=0.142 Sum_probs=106.9
Q ss_pred CCCCCccccCCceeEEEEEc-CCCcE--EEEEEcccCChh------------------------cHHHHHHHHHHHHcCC
Q 004155 423 FAPDNKIGEGGFGPVYKGHM-ADGTV--VAVKQLSSKSKQ------------------------GNREFVNEIGMISALQ 475 (771)
Q Consensus 423 f~~~~~lG~G~~g~Vy~~~~-~~g~~--vavK~l~~~~~~------------------------~~~~~~~E~~~l~~l~ 475 (771)
|.+.+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|+.++.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999976 68899 999987543111 1236889999999998
Q ss_pred CCcE--EeEEEEEEeCCEEEEEEEeccC-C----CHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhh-hcCCCceec
Q 004155 476 HPNL--VKLHGCCIEGNQLLLIYEYMEN-N----SLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLH-EESRLKIVH 547 (771)
Q Consensus 476 h~ni--v~l~~~~~~~~~~~lV~E~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH-~~~~~~ivH 547 (771)
|+++ +.++++ +..++||||+.+ | +|.++.. ..++..+..++.|++.||.||| +. +|+|
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGR-------ELKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGG-------GGGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhh-------ccChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 7753 344432 246899999942 4 7777652 1245678899999999999999 77 8999
Q ss_pred cCCCCCcEEEcCCCCeEEEeecCcccc
Q 004155 548 RDIKATNVLLDKDLNPKISDFGLAKLD 574 (771)
Q Consensus 548 ~Dlkp~NIll~~~~~~kl~DFGla~~~ 574 (771)
|||||+|||++. .++|+|||+|...
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999998 9999999999754
No 334
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.76 E-value=1.1e-18 Score=186.82 Aligned_cols=172 Identities=11% Similarity=0.078 Sum_probs=139.2
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCch----------------hhcCCcCCCEEEcCCCCCCC
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPS----------------GIASLSKLTDLRISDLNGTE 65 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~----------------~~~~l~~L~~L~L~~n~l~~ 65 (771)
+++|+.|+|++|++++..| +..+++|++|+|++|+|++..+. ....+++|+.|+|++|++++
T Consensus 57 l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l~~ 134 (317)
T 3o53_A 57 FTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITM 134 (317)
T ss_dssp CTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCSEEEECCCSSCEEEECCSSCCCS
T ss_pred CCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccCCCCcCEEECCCCccCCcCccccCCCCEEECCCCCCCC
Confidence 5678888888888875443 77778888888887777632110 01235778899999999999
Q ss_pred CCCCCccCCCCCcEEEccCCcCcccCChhhh-cCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh-
Q 004155 66 APFPPLDKMKKMKTLILRSCNVSGKLPDYLG-LMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM- 143 (771)
Q Consensus 66 ~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~- 143 (771)
..+..+..+++|++|+|++|++++..|..+. .+++|++|+|++|.+++ +|. ...+++|+.|+|++|++++ +|..+
T Consensus 135 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~ 211 (317)
T 3o53_A 135 LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKG-QVVFAKLKTLDLSSNKLAF-MGPEFQ 211 (317)
T ss_dssp GGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EEC-CCCCTTCCEEECCSSCCCE-ECGGGG
T ss_pred ccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-ccc-ccccccCCEEECCCCcCCc-chhhhc
Confidence 8888899999999999999999977777764 79999999999999994 443 4458999999999999995 55556
Q ss_pred -hhcCCeecccCCccccCCCcccccccccceeccCCC
Q 004155 144 -LQKGDRVDLSYNSFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 144 -~~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
+++|+.|+|++|+++. +|..+..+++|+.++++.|
T Consensus 212 ~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N 247 (317)
T 3o53_A 212 SAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGN 247 (317)
T ss_dssp GGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTC
T ss_pred ccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCC
Confidence 8899999999999995 6778899999999998754
No 335
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.76 E-value=2.1e-18 Score=209.00 Aligned_cols=118 Identities=19% Similarity=0.180 Sum_probs=72.1
Q ss_pred CCCCcEEEccCCcccccC-CccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCC--ccCCCCCc
Q 004155 2 LVTLKDFRISDNHFTGKI-PNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPP--LDKMKKMK 78 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~i-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~--~~~l~~L~ 78 (771)
|++|++|+|++|.+.+.+ |..|.++++|++|+|++|.|++..|..|++|++|++|+|++|.+++..+.. |.++++|+
T Consensus 47 l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~ 126 (844)
T 3j0a_A 47 LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALT 126 (844)
T ss_dssp CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCC
T ss_pred cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCC
Confidence 456666666666555455 455666666666666666666656666666666666666666666543332 66666666
Q ss_pred EEEccCCcCcccCC-hhhhcCCCCcEEEccCCCCCCCCCccc
Q 004155 79 TLILRSCNVSGKLP-DYLGLMTSLKVLDVSFNKLNGAIPSTF 119 (771)
Q Consensus 79 ~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~ip~~~ 119 (771)
+|+|++|.+++..| ..|+++++|++|+|++|.+++..|..+
T Consensus 127 ~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l 168 (844)
T 3j0a_A 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHEL 168 (844)
T ss_dssp EEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGG
T ss_pred EEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHc
Confidence 66666666664433 356666666666666666655544443
No 336
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.76 E-value=2.8e-18 Score=200.75 Aligned_cols=164 Identities=17% Similarity=0.158 Sum_probs=145.5
Q ss_pred EEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCCc
Q 004155 7 DFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSCN 86 (771)
Q Consensus 7 ~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 86 (771)
+.+-++.+|+ .+|..+. +++++|+|++|+|++..|.+|.+|++|++|+|++|+++++++..|.+|++|++|+|++|+
T Consensus 35 ~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~ 111 (635)
T 4g8a_A 35 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 111 (635)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCc
Confidence 4556677888 8998775 589999999999997777899999999999999999999999999999999999999999
Q ss_pred CcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccc-cCchhh--hhcCCeecccCCccccCCCc
Q 004155 87 VSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTG-TIPPWM--LQKGDRVDLSYNSFTAGSSE 163 (771)
Q Consensus 87 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g-~iP~~~--~~~L~~l~ls~N~l~~~~p~ 163 (771)
|++..+..|.++++|++|+|++|+|++..+..|+++++|++|+|++|++++ .+|..+ ++.|+.|+|++|++++..|.
T Consensus 112 l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 191 (635)
T 4g8a_A 112 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 191 (635)
T ss_dssp CCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred CCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccc
Confidence 996556779999999999999999997666779999999999999999985 356666 78999999999999999998
Q ss_pred ccccccccce
Q 004155 164 TSCQYRSVNL 173 (771)
Q Consensus 164 ~~~~l~~L~~ 173 (771)
.+..+.++..
T Consensus 192 ~l~~L~~l~~ 201 (635)
T 4g8a_A 192 DLRVLHQMPL 201 (635)
T ss_dssp GGHHHHTCTT
T ss_pred cccchhhhhh
Confidence 8887776653
No 337
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.75 E-value=2.7e-18 Score=196.54 Aligned_cols=172 Identities=16% Similarity=0.140 Sum_probs=148.5
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCC--CCCCccCCCCCcEE
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEA--PFPPLDKMKKMKTL 80 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L 80 (771)
.+|+.|++++|++. .++- +..+++|++|+|++|++++.+|..++.+++|+.|+|++|++++. .|..+.++++|++|
T Consensus 302 ~~L~~L~l~~n~l~-~~~~-~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L 379 (520)
T 2z7x_B 302 MNIKNFTVSGTRMV-HMLC-PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQL 379 (520)
T ss_dssp CCCSEEEEESSCCC-CCCC-CSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEE
T ss_pred CceeEEEcCCCccc-cccc-hhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEE
Confidence 46999999999988 3331 26789999999999999988999999999999999999999973 34568899999999
Q ss_pred EccCCcCcccCChh-hhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCcc
Q 004155 81 ILRSCNVSGKLPDY-LGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSF 157 (771)
Q Consensus 81 ~Ls~N~l~g~~p~~-~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l 157 (771)
+|++|++++.+|.. +..+++|+.|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|..+ +++|+.|+|++|++
T Consensus 380 ~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l 456 (520)
T 2z7x_B 380 DISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQL 456 (520)
T ss_dssp ECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCC
T ss_pred ECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcC
Confidence 99999999768765 88899999999999999988887765 79999999999999 888876 88999999999999
Q ss_pred ccCCCcccccccccceeccCCC
Q 004155 158 TAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 158 ~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
+...+..+..+++|+.++++.|
T Consensus 457 ~~l~~~~~~~l~~L~~L~l~~N 478 (520)
T 2z7x_B 457 KSVPDGIFDRLTSLQKIWLHTN 478 (520)
T ss_dssp CCCCTTTTTTCTTCCEEECCSS
T ss_pred CccCHHHhccCCcccEEECcCC
Confidence 9644445888999999988744
No 338
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.75 E-value=1.8e-18 Score=199.37 Aligned_cols=179 Identities=15% Similarity=0.099 Sum_probs=159.9
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
.++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++.++..|+++++|++|+
T Consensus 25 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 104 (549)
T 2z81_A 25 TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLN 104 (549)
T ss_dssp CTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEE
T ss_pred CCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEE
Confidence 35899999999999987788999999999999999999988889999999999999999999999887899999999999
Q ss_pred ccCCcCcc-cCChhhhcCCCCcEEEccCCCCCCCCC-ccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCcc
Q 004155 82 LRSCNVSG-KLPDYLGLMTSLKVLDVSFNKLNGAIP-STFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSF 157 (771)
Q Consensus 82 Ls~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~ip-~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l 157 (771)
|++|++++ .+|..++++++|++|+|++|++.+.+| ..|..+++|++|+|++|++++.+|..+ +++|+.|++++|.+
T Consensus 105 Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~ 184 (549)
T 2z81_A 105 LMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSES 184 (549)
T ss_dssp CTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBS
T ss_pred CCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcc
Confidence 99999986 467889999999999999999666776 579999999999999999999899887 78899999999998
Q ss_pred ccCCCcccccccccceeccCCCC
Q 004155 158 TAGSSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 158 ~~~~p~~~~~l~~L~~l~~s~~~ 180 (771)
.......+..+++|+.|+++.+.
T Consensus 185 ~~~~~~~~~~l~~L~~L~L~~n~ 207 (549)
T 2z81_A 185 AFLLEIFADILSSVRYLELRDTN 207 (549)
T ss_dssp TTHHHHHHHSTTTBSEEEEESCB
T ss_pred cccchhhHhhcccccEEEccCCc
Confidence 75433334568899999987653
No 339
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.75 E-value=3.2e-18 Score=197.94 Aligned_cols=172 Identities=17% Similarity=0.163 Sum_probs=145.2
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCC--CCCccCCCCCcEE
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAP--FPPLDKMKKMKTL 80 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L 80 (771)
.+|+.|++++|.+. .++- ...+++|++|+|++|++++.+|..++++++|+.|+|++|++++.+ |..+.++++|++|
T Consensus 331 ~~L~~L~l~~n~~~-~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L 408 (562)
T 3a79_B 331 MNIKMLSISDTPFI-HMVC-PPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETL 408 (562)
T ss_dssp CCCSEEEEESSCCC-CCCC-CSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEE
T ss_pred CcceEEEccCCCcc-cccC-ccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEE
Confidence 46899999999987 3321 267899999999999999889999999999999999999999865 3568899999999
Q ss_pred EccCCcCcccCCh-hhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCcc
Q 004155 81 ILRSCNVSGKLPD-YLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSF 157 (771)
Q Consensus 81 ~Ls~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l 157 (771)
+|++|++++.+|. .+..+++|+.|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|..+ +++|+.|+|++|++
T Consensus 409 ~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l 485 (562)
T 3a79_B 409 DVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQL 485 (562)
T ss_dssp ECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCC
T ss_pred ECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCC
Confidence 9999999976776 478899999999999999988777654 68999999999999 788766 78899999999999
Q ss_pred ccCCCcccccccccceeccCCC
Q 004155 158 TAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 158 ~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
+...+..+..+++|+.++++.|
T Consensus 486 ~~l~~~~~~~l~~L~~L~l~~N 507 (562)
T 3a79_B 486 KSVPDGVFDRLTSLQYIWLHDN 507 (562)
T ss_dssp CCCCTTSTTTCTTCCCEECCSC
T ss_pred CCCCHHHHhcCCCCCEEEecCC
Confidence 9644444888999999888744
No 340
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.75 E-value=4.8e-18 Score=196.79 Aligned_cols=166 Identities=20% Similarity=0.256 Sum_probs=144.5
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
|++|+.|+|++|.|+ .+| .+..+++|+.|+|++|+|++..| +..|++|+.|+|++|++.+. +.+..|++|+.|+
T Consensus 42 L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~ 115 (605)
T 1m9s_A 42 LNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL--SSLKDLKKLKSLS 115 (605)
T ss_dssp HTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC--TTSTTCTTCCEEE
T ss_pred CCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC--hhhccCCCCCEEE
Confidence 578999999999998 676 48999999999999999995444 89999999999999999885 3789999999999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhhhhcCCeecccCCccccCC
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWMLQKGDRVDLSYNSFTAGS 161 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~L~~l~ls~N~l~~~~ 161 (771)
|++|+|++ + +.+..|++|+.|+|++|+|++. ..++.|++|+.|+|++|+|++..|-.-+++|+.|+|++|+|++.
T Consensus 116 Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~l- 190 (605)
T 1m9s_A 116 LEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL- 190 (605)
T ss_dssp CTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC-
T ss_pred ecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCCC-
Confidence 99999994 4 4689999999999999999954 57999999999999999999766622289999999999999975
Q ss_pred CcccccccccceeccCCC
Q 004155 162 SETSCQYRSVNLFASSSK 179 (771)
Q Consensus 162 p~~~~~l~~L~~l~~s~~ 179 (771)
..+..+++|+.|+++.+
T Consensus 191 -~~l~~l~~L~~L~L~~N 207 (605)
T 1m9s_A 191 -RALAGLKNLDVLELFSQ 207 (605)
T ss_dssp -GGGTTCTTCSEEECCSE
T ss_pred -hHHccCCCCCEEEccCC
Confidence 35888999999998754
No 341
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.75 E-value=1.1e-17 Score=181.16 Aligned_cols=168 Identities=17% Similarity=0.228 Sum_probs=135.9
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
+++|+.|++++|+++ .++. +..+++|+.|+|++|+++ .++. +..+++|+.|++++|.+....+ +..+++|+.|+
T Consensus 154 l~~L~~L~l~~~~~~-~~~~-~~~l~~L~~L~l~~n~l~-~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~ 227 (347)
T 4fmz_A 154 MTGLNYLTVTESKVK-DVTP-IANLTDLYSLSLNYNQIE-DISP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLK 227 (347)
T ss_dssp CTTCCEEECCSSCCC-CCGG-GGGCTTCSEEECTTSCCC-CCGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEE
T ss_pred CCCCcEEEecCCCcC-Cchh-hccCCCCCEEEccCCccc-cccc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEE
Confidence 678899999999988 4444 888899999999999988 4444 7888889999999888887654 78888899999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh-hhcCCeecccCCccccC
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM-LQKGDRVDLSYNSFTAG 160 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~-~~~L~~l~ls~N~l~~~ 160 (771)
|++|+++ .+|. +..+++|+.|+|++|.+++ + ..+..+++|+.|++++|++++ +|... +++|+.|++++|++++.
T Consensus 228 l~~n~l~-~~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~~~~~l~~L~~L~L~~n~l~~~ 302 (347)
T 4fmz_A 228 IGNNKIT-DLSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISD-ISVLNNLSQLNSLFLNNNQLGNE 302 (347)
T ss_dssp CCSSCCC-CCGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-CGGGGGCTTCSEEECCSSCCCGG
T ss_pred ccCCccC-CCcc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCC-ChhhcCCCCCCEEECcCCcCCCc
Confidence 9999888 4444 8888889999999998884 4 458888889999999998884 45422 78888899999988888
Q ss_pred CCcccccccccceeccCCCC
Q 004155 161 SSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 161 ~p~~~~~l~~L~~l~~s~~~ 180 (771)
.|..+..+++|+.|+++.|.
T Consensus 303 ~~~~l~~l~~L~~L~L~~n~ 322 (347)
T 4fmz_A 303 DMEVIGGLTNLTTLFLSQNH 322 (347)
T ss_dssp GHHHHHTCTTCSEEECCSSS
T ss_pred ChhHhhccccCCEEEccCCc
Confidence 88888888888888887553
No 342
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.74 E-value=9.6e-18 Score=192.27 Aligned_cols=138 Identities=19% Similarity=0.309 Sum_probs=89.1
Q ss_pred CCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEcc
Q 004155 4 TLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILR 83 (771)
Q Consensus 4 ~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 83 (771)
+|+.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|+.|+|++|++++++ . +.+ +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~ip-~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLSTLP-E-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSCCC-C-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCCcc-h-hhc--CCCEEECC
Confidence 56777777777773 666553 66777777777776 566 34667777777777777643 3 443 67777777
Q ss_pred CCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhhhhcCCeecccCCccccCCCc
Q 004155 84 SCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWMLQKGDRVDLSYNSFTAGSSE 163 (771)
Q Consensus 84 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~L~~l~ls~N~l~~~~p~ 163 (771)
+|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. +.++|+.|+|++|+|+ .+|.
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LPESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCS-SCCC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hhCCCCEEECcCCCCC-chhh
Confidence 777764 555 46667777777777763 554 45666667777776664 555 4466666666666666 3444
No 343
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.74 E-value=7.3e-18 Score=177.98 Aligned_cols=150 Identities=19% Similarity=0.323 Sum_probs=132.9
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
+++|+.|+|++|+|+ .++. +.++++|++|+|++|++++ +| .+..+++|+.|+|++|++++. +.+..+++|+.|+
T Consensus 67 l~~L~~L~L~~n~l~-~~~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~ 140 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLT-DIKP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLY 140 (291)
T ss_dssp CTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEE
T ss_pred CCCCCEEEccCCccC-CCcc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEE
Confidence 689999999999999 4555 9999999999999999985 44 499999999999999999986 5789999999999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh-hhcCCeecccCCccccC
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM-LQKGDRVDLSYNSFTAG 160 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~-~~~L~~l~ls~N~l~~~ 160 (771)
|++|++++ + ..+..+++|+.|+|++|++++..| +..+++|+.|+|++|+|+ .+|... +++|+.|++++|+++..
T Consensus 141 l~~n~l~~-~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~-~l~~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 141 LGNNKITD-I-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS-DLRALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-BCGGGTTCTTCSEEEEEEEEEECC
T ss_pred ccCCcCCc-c-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC-CChhhccCCCCCEEECcCCcccCC
Confidence 99999995 4 689999999999999999996544 999999999999999999 466533 88999999999999864
Q ss_pred CC
Q 004155 161 SS 162 (771)
Q Consensus 161 ~p 162 (771)
..
T Consensus 216 ~~ 217 (291)
T 1h6t_A 216 PI 217 (291)
T ss_dssp CE
T ss_pred cc
Confidence 43
No 344
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=1.2e-17 Score=173.73 Aligned_cols=146 Identities=19% Similarity=0.248 Sum_probs=74.6
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEc
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLIL 82 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 82 (771)
++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+|++ +|. +..+++|+.|+|++|++++.++ +.. ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~l~~--~~~-~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKNLNG--IPS-ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSCCTT--CCC-SSCCEEEC
T ss_pred CcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCCcCc--ccc-CcccEEEc
Confidence 45555555555555 444 35555555555555555553 332 5555555555555555555332 112 55555555
Q ss_pred cCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh-hhcCCeecccCCccccC
Q 004155 83 RSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM-LQKGDRVDLSYNSFTAG 160 (771)
Q Consensus 83 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~-~~~L~~l~ls~N~l~~~ 160 (771)
++|+|++ +| .+..+++|+.|+|++|+|++ +| .+..+++|+.|+|++|++++. +... +++|+.|++++|++++.
T Consensus 114 ~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 114 DNNELRD-TD-SLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CSSCCSB-SG-GGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECC
T ss_pred cCCccCC-Ch-hhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCC
Confidence 5555552 22 35555555555555555552 33 355555555555555555533 1111 45555555555555543
No 345
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=2.5e-18 Score=178.80 Aligned_cols=163 Identities=16% Similarity=0.199 Sum_probs=141.3
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEc
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLIL 82 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 82 (771)
.++..|+|++|.++ .++ .+..+++|+.|+|++|+|+ .+| .+..+++|+.|+|++|++++.++ +.++++|+.|+|
T Consensus 19 ~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L 92 (263)
T 1xeu_A 19 ANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEEC
T ss_pred HHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEEC
Confidence 45667889999999 555 5889999999999999998 677 79999999999999999999875 999999999999
Q ss_pred cCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh-hhcCCeecccCCccccCC
Q 004155 83 RSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM-LQKGDRVDLSYNSFTAGS 161 (771)
Q Consensus 83 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~-~~~L~~l~ls~N~l~~~~ 161 (771)
++|+++ .+|... . ++|+.|+|++|+|++ +| .+..+++|+.|+|++|+|++ +|... +++|+.|+|++|++++.
T Consensus 93 ~~N~l~-~l~~~~-~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~-~~~l~~l~~L~~L~L~~N~i~~~- 165 (263)
T 1xeu_A 93 NRNRLK-NLNGIP-S-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKS-IVMLGFLSKLEVLDLHGNEITNT- 165 (263)
T ss_dssp CSSCCS-CCTTCC-C-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCB-CGGGGGCTTCCEEECTTSCCCBC-
T ss_pred CCCccC-CcCccc-c-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCC-ChHHccCCCCCEEECCCCcCcch-
Confidence 999999 466533 3 999999999999995 54 59999999999999999995 55322 89999999999999987
Q ss_pred CcccccccccceeccCCC
Q 004155 162 SETSCQYRSVNLFASSSK 179 (771)
Q Consensus 162 p~~~~~l~~L~~l~~s~~ 179 (771)
..+..+++|+.|+++.|
T Consensus 166 -~~l~~l~~L~~L~l~~N 182 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTGQ 182 (263)
T ss_dssp -TTSTTCCCCCEEEEEEE
T ss_pred -HHhccCCCCCEEeCCCC
Confidence 67888999999988644
No 346
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.73 E-value=2.6e-17 Score=162.69 Aligned_cols=131 Identities=18% Similarity=0.215 Sum_probs=119.0
Q ss_pred cEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCC
Q 004155 6 KDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSC 85 (771)
Q Consensus 6 ~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 85 (771)
+.+++++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..|.++++|+.|+|++|++++.++..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 57899999999 8998765 68999999999998 88999999999999999999999999889999999999999999
Q ss_pred cCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCc
Q 004155 86 NVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIP 140 (771)
Q Consensus 86 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP 140 (771)
+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+.....
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 9997777889999999999999999995555568999999999999999985443
No 347
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.72 E-value=1.9e-17 Score=191.77 Aligned_cols=157 Identities=18% Similarity=0.299 Sum_probs=137.2
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
|++|+.|+|++|+|++ +|. +..+++|+.|+|++|+|++ +| .+..|++|+.|+|++|++... +.+..|++|+.|+
T Consensus 64 l~~L~~L~Ls~N~l~~-~~~-l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~ 137 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTD-IKP-LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLY 137 (605)
T ss_dssp CTTCCEEECTTSCCCC-CGG-GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEE
T ss_pred CCCCCEEEeeCCCCCC-Chh-hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEE
Confidence 7899999999999995 555 9999999999999999984 55 799999999999999999985 4699999999999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh-hhcCCeecccCCccccC
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM-LQKGDRVDLSYNSFTAG 160 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~-~~~L~~l~ls~N~l~~~ 160 (771)
|++|+|++. ..+..|++|+.|+|++|.|++..| +..+++|+.|+|++|+|++ +|... +++|+.|+|++|++++.
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LRALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CGGGTTCTTCSEEECCSEEEECC
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC-ChHHccCCCCCEEEccCCcCcCC
Confidence 999999954 689999999999999999997666 9999999999999999995 55433 89999999999999976
Q ss_pred CCccccccc
Q 004155 161 SSETSCQYR 169 (771)
Q Consensus 161 ~p~~~~~l~ 169 (771)
....+..+.
T Consensus 213 p~~~~~~l~ 221 (605)
T 1m9s_A 213 PINHQSNLV 221 (605)
T ss_dssp CCCCCSSCE
T ss_pred cccccccEE
Confidence 554444433
No 348
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.72 E-value=7.5e-18 Score=162.47 Aligned_cols=131 Identities=21% Similarity=0.141 Sum_probs=106.3
Q ss_pred CCcCCEEEcccCCcc-ccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCCcCcccCChhhhcCCCCcEE
Q 004155 26 WTLLEKLVIQASGLV-GPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSCNVSGKLPDYLGLMTSLKVL 104 (771)
Q Consensus 26 l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 104 (771)
.++|+.|+|++|+++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 477888888888887 77888888888888888888888876 678888888888888888887788888788889999
Q ss_pred EccCCCCCCCCC--ccccCCCCCcEEEcCCCcccccCc---hhh--hhcCCeecccCCcccc
Q 004155 105 DVSFNKLNGAIP--STFMGLLDVDYIYLTGNLLTGTIP---PWM--LQKGDRVDLSYNSFTA 159 (771)
Q Consensus 105 ~Ls~N~l~g~ip--~~~~~l~~L~~L~Ls~N~l~g~iP---~~~--~~~L~~l~ls~N~l~~ 159 (771)
+|++|++++ +| ..+..+++|+.|+|++|++++..+ ..+ +++|+.|++++|.+..
T Consensus 101 ~Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 101 NLSGNKLKD-ISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp ECBSSSCCS-SGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred eccCCccCc-chhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 999998884 33 678888889999999998884433 234 7788888988888774
No 349
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.72 E-value=3.4e-18 Score=202.82 Aligned_cols=158 Identities=18% Similarity=0.149 Sum_probs=124.1
Q ss_pred CcEEEccCCcccc---------cCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCC
Q 004155 5 LKDFRISDNHFTG---------KIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMK 75 (771)
Q Consensus 5 L~~L~Ls~N~l~~---------~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 75 (771)
|+.|+|+.|.|++ ..|..+..+++|+.|+|++|.|. .+|..+..|++|++|+|++|+++ ..|..|++|+
T Consensus 193 l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 270 (727)
T 4b8c_D 193 LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLS 270 (727)
T ss_dssp -----------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGT
T ss_pred hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCC
Confidence 3445555555443 45778899999999999999998 89988889999999999999999 4567899999
Q ss_pred CCcEEEccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--h-hcCCeecc
Q 004155 76 KMKTLILRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--L-QKGDRVDL 152 (771)
Q Consensus 76 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~-~~L~~l~l 152 (771)
+|++|+|++|+|+ .+|..|++|++|++|+|++|.|+ .+|..|+.|++|+.|+|++|.|+|.+|..+ + ..+..++|
T Consensus 271 ~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l 348 (727)
T 4b8c_D 271 NLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYL 348 (727)
T ss_dssp TCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhh
Confidence 9999999999999 89999999999999999999998 889999999999999999999999888877 2 22345889
Q ss_pred cCCccccCCCcccc
Q 004155 153 SYNSFTAGSSETSC 166 (771)
Q Consensus 153 s~N~l~~~~p~~~~ 166 (771)
++|.+++.+|..+.
T Consensus 349 ~~N~l~~~~p~~l~ 362 (727)
T 4b8c_D 349 RDNRPEIPLPHERR 362 (727)
T ss_dssp HHCCCCCCCCCC--
T ss_pred ccCcccCcCccccc
Confidence 99999999887543
No 350
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.72 E-value=2.9e-19 Score=205.76 Aligned_cols=168 Identities=17% Similarity=0.099 Sum_probs=118.4
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCC-------------ccccCchhhcCCcC----------------
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASG-------------LVGPIPSGIASLSK---------------- 52 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~---------------- 52 (771)
+++|+.|+|++|+|+ .+|..++++++|+.|++++|. +.+.+|..++.|++
T Consensus 348 ~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~ 426 (567)
T 1dce_A 348 DEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLR 426 (567)
T ss_dssp TTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHH
T ss_pred CccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhh
Confidence 567899999999998 999999999999999998775 55566666554433
Q ss_pred ----------------CCEEEcCCCCCCCCCCCCccCCCCCcEEEccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCC
Q 004155 53 ----------------LTDLRISDLNGTEAPFPPLDKMKKMKTLILRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIP 116 (771)
Q Consensus 53 ----------------L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip 116 (771)
|+.|+|++|++++++ . |+++++|+.|+|++|+|+ .+|..++.+++|+.|+|++|+|++ +|
T Consensus 427 ~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~lp-~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp 502 (567)
T 1dce_A 427 SKFLLENSVLKMEYADVRVLHLAHKDLTVLC-H-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD 502 (567)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECTTSCCSSCC-C-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG
T ss_pred hhhhhcccccccCccCceEEEecCCCCCCCc-C-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc
Confidence 456677777777643 2 777777777777777777 677777777777777777777774 56
Q ss_pred ccccCCCCCcEEEcCCCcccccC-chhh--hhcCCeecccCCccccCCCcc---cccccccceec
Q 004155 117 STFMGLLDVDYIYLTGNLLTGTI-PPWM--LQKGDRVDLSYNSFTAGSSET---SCQYRSVNLFA 175 (771)
Q Consensus 117 ~~~~~l~~L~~L~Ls~N~l~g~i-P~~~--~~~L~~l~ls~N~l~~~~p~~---~~~l~~L~~l~ 175 (771)
.++.+++|+.|+|++|+|++.. |..+ +++|+.|+|++|++++.+|.. +..+++|+.|+
T Consensus 503 -~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 503 -GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp -GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred -ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccC
Confidence 6777777777777777777554 6655 667777777777777655432 22345555553
No 351
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.71 E-value=3.8e-17 Score=184.41 Aligned_cols=166 Identities=23% Similarity=0.315 Sum_probs=140.2
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
+++|+.|+|++|++++..| ++.+++|+.|+|++|++++ ++ .+..+++|+.|+|++|++++.++ +..+++|+.|+
T Consensus 198 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 271 (466)
T 1o6v_A 198 LTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-IG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELK 271 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred CCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-ch-hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEE
Confidence 6789999999999995544 7888999999999999984 44 68889999999999999988764 88899999999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhhhhcCCeecccCCccccCC
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWMLQKGDRVDLSYNSFTAGS 161 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~L~~l~ls~N~l~~~~ 161 (771)
|++|++++ +|. +..+++|+.|+|++|++++..| +..+++|+.|+|++|++++..|-..+++|+.|++++|++++.
T Consensus 272 l~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~- 346 (466)
T 1o6v_A 272 LGANQISN-ISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV- 346 (466)
T ss_dssp CCSSCCCC-CGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC-
T ss_pred CCCCccCc-ccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc-
Confidence 99999985 443 8889999999999999996544 788999999999999999766644488999999999999875
Q ss_pred CcccccccccceeccCCC
Q 004155 162 SETSCQYRSVNLFASSSK 179 (771)
Q Consensus 162 p~~~~~l~~L~~l~~s~~ 179 (771)
..+..+++|+.|+++.+
T Consensus 347 -~~l~~l~~L~~L~l~~n 363 (466)
T 1o6v_A 347 -SSLANLTNINWLSAGHN 363 (466)
T ss_dssp -GGGTTCTTCCEEECCSS
T ss_pred -hhhccCCCCCEEeCCCC
Confidence 46888899999988755
No 352
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.71 E-value=5e-17 Score=175.79 Aligned_cols=167 Identities=17% Similarity=0.229 Sum_probs=139.9
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
+++|+.|++++|.....++ .+..+++|++|++++|.+.+ ++. +..+++|+.|++++|.+.+..+ +..+++|+.|+
T Consensus 131 l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~-~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 205 (347)
T 4fmz_A 131 LTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKD-VTP-IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFT 205 (347)
T ss_dssp CTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCC-CGG-GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred CCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCC-chh-hccCCCCCEEEccCCccccccc--ccCCCccceee
Confidence 6789999999997764544 48999999999999999984 443 8899999999999999988654 88899999999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh-hhcCCeecccCCccccC
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM-LQKGDRVDLSYNSFTAG 160 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~-~~~L~~l~ls~N~l~~~ 160 (771)
+++|++.+..+ +..+++|+.|+|++|++++ +|. +..+++|+.|+|++|++++ ++... +++|+.|++++|++++.
T Consensus 206 l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~~~~~~l~~L~~L~l~~n~l~~~ 280 (347)
T 4fmz_A 206 AYVNQITDITP--VANMTRLNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISD-INAVKDLTKLKMLNVGSNQISDI 280 (347)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGGGTTCTTCCEEECCSSCCCCC
T ss_pred cccCCCCCCch--hhcCCcCCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCC-ChhHhcCCCcCEEEccCCccCCC
Confidence 99999985443 8889999999999999994 444 8899999999999999984 55333 88999999999999875
Q ss_pred CCcccccccccceeccCCCC
Q 004155 161 SSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 161 ~p~~~~~l~~L~~l~~s~~~ 180 (771)
..+..+++|+.|+++.+.
T Consensus 281 --~~~~~l~~L~~L~L~~n~ 298 (347)
T 4fmz_A 281 --SVLNNLSQLNSLFLNNNQ 298 (347)
T ss_dssp --GGGGGCTTCSEEECCSSC
T ss_pred --hhhcCCCCCCEEECcCCc
Confidence 457888999999988664
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.71 E-value=1.5e-17 Score=190.62 Aligned_cols=155 Identities=20% Similarity=0.219 Sum_probs=135.3
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
+++|+.|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|+.|+|++|+++++++ .+++|+.|+
T Consensus 79 ~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~lp~----~l~~L~~L~ 146 (571)
T 3cvr_A 79 PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTMLPE----LPALLEYIN 146 (571)
T ss_dssp CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSCCCC----CCTTCCEEE
T ss_pred cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCCCCC----cCccccEEe
Confidence 467999999999999 899 457999999999999996 887 765 99999999999999654 689999999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhhhhcC-------CeecccC
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWMLQKG-------DRVDLSY 154 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~L-------~~l~ls~ 154 (771)
|++|+|++ +|. .+++|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|. +..+| +.|+|++
T Consensus 147 Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~~L~~~~~~L~~L~Ls~ 216 (571)
T 3cvr_A 147 ADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPVRNHHSEETEIFFRCRE 216 (571)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC--------CCEEEECCS
T ss_pred CCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHHhhhcccccceEEecCC
Confidence 99999995 886 57899999999999996 887 66 89999999999999 7888 65577 9999999
Q ss_pred CccccCCCcccccccccceeccCCC
Q 004155 155 NSFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 155 N~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
|+|+ .+|..+..+++|+.|+++.|
T Consensus 217 N~l~-~lp~~l~~l~~L~~L~L~~N 240 (571)
T 3cvr_A 217 NRIT-HIPENILSLDPTCTIILEDN 240 (571)
T ss_dssp SCCC-CCCGGGGGSCTTEEEECCSS
T ss_pred Ccce-ecCHHHhcCCCCCEEEeeCC
Confidence 9999 47888888999999998754
No 354
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.71 E-value=6.2e-17 Score=181.90 Aligned_cols=161 Identities=17% Similarity=0.150 Sum_probs=134.6
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
|++|++|+|++|+|++ +| .++.+++|++|+|++|+|++ +| ++.+++|++|+|++|++++.+ ++++++|++|+
T Consensus 41 l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~~---~~~l~~L~~L~ 112 (457)
T 3bz5_A 41 LATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNLD---VTPLTKLTYLN 112 (457)
T ss_dssp HTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEE
T ss_pred cCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCceee---cCCCCcCCEEE
Confidence 5789999999999994 56 68999999999999999996 45 889999999999999998863 88899999999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhhhhcCCeecccCCccccCC
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWMLQKGDRVDLSYNSFTAGS 161 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~L~~l~ls~N~l~~~~ 161 (771)
|++|++++ +| ++.+++|++|++++|+|++ ++ ++.+++|++|++++|+..+.++-.-+++|+.|++++|++++.
T Consensus 113 L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~l- 185 (457)
T 3bz5_A 113 CDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITEL- 185 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCCC-
T ss_pred CCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCcccccccccCCcCCEEECCCCcccee-
Confidence 99999995 55 8899999999999999996 44 788888999999988766677544478888888888888873
Q ss_pred CcccccccccceeccCCC
Q 004155 162 SETSCQYRSVNLFASSSK 179 (771)
Q Consensus 162 p~~~~~l~~L~~l~~s~~ 179 (771)
| +..+++|+.|+++.+
T Consensus 186 ~--l~~l~~L~~L~l~~N 201 (457)
T 3bz5_A 186 D--VSQNKLLNRLNCDTN 201 (457)
T ss_dssp C--CTTCTTCCEEECCSS
T ss_pred c--cccCCCCCEEECcCC
Confidence 4 677778888877654
No 355
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.71 E-value=5.7e-17 Score=182.92 Aligned_cols=166 Identities=22% Similarity=0.297 Sum_probs=145.4
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
+++|+.|+|++|+++ .++ .+..+++|++|+|++|++++..| ++.+++|+.|+|++|++++. +.+..+++|+.|+
T Consensus 176 l~~L~~L~l~~n~l~-~~~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 249 (466)
T 1o6v_A 176 LTTLERLDISSNKVS-DIS-VLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLD 249 (466)
T ss_dssp CTTCCEEECCSSCCC-CCG-GGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEE
T ss_pred CCCCCEEECcCCcCC-CCh-hhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEE
Confidence 688999999999998 454 48999999999999999996655 78899999999999999885 4688999999999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhhhhcCCeecccCCccccCC
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWMLQKGDRVDLSYNSFTAGS 161 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~L~~l~ls~N~l~~~~ 161 (771)
|++|++++..| +..+++|+.|+|++|.+++..| +..+++|+.|+|++|++++..|-.-+++|+.|+|++|++++..
T Consensus 250 l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~ 325 (466)
T 1o6v_A 250 LANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDIS 325 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCG
T ss_pred CCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCch
Confidence 99999996544 8899999999999999996444 8899999999999999996555333899999999999999877
Q ss_pred CcccccccccceeccCCC
Q 004155 162 SETSCQYRSVNLFASSSK 179 (771)
Q Consensus 162 p~~~~~l~~L~~l~~s~~ 179 (771)
| +..+++|+.|+++.+
T Consensus 326 ~--~~~l~~L~~L~l~~n 341 (466)
T 1o6v_A 326 P--VSSLTKLQRLFFYNN 341 (466)
T ss_dssp G--GGGCTTCCEEECCSS
T ss_pred h--hccCccCCEeECCCC
Confidence 6 778999999998765
No 356
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=2.2e-17 Score=163.79 Aligned_cols=150 Identities=19% Similarity=0.272 Sum_probs=133.6
Q ss_pred ccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCCcCcccCChhhhcCCCCc
Q 004155 23 IQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSCNVSGKLPDYLGLMTSLK 102 (771)
Q Consensus 23 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 102 (771)
...+++|+.|+|++|+++ .+| .+..+++|+.|+|++|.++.. +.+..+++|++|+|++|++++..|..++.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCC--GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcc--hhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 467889999999999999 778 799999999999999977654 4789999999999999999988899999999999
Q ss_pred EEEccCCCCCCCCCccccCCCCCcEEEcCCCc-ccccCchhh-hhcCCeecccCCccccCCCcccccccccceeccCCC
Q 004155 103 VLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNL-LTGTIPPWM-LQKGDRVDLSYNSFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 103 ~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~-l~g~iP~~~-~~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
+|+|++|++++..|..++.+++|++|+|++|+ ++ .+|... +++|+.|++++|+++.. + .+..+++|+.|+++.|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIMPLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCGGGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccHhhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCc
Confidence 99999999998889999999999999999998 55 777433 88999999999999974 3 7888999999988754
No 357
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.71 E-value=1.1e-16 Score=179.85 Aligned_cols=160 Identities=18% Similarity=0.142 Sum_probs=116.1
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
+++|++|+|++|+|++ +| ++.+++|++|+|++|+|++ +| ++++++|++|+|++|++++.+ ++.+++|++|+
T Consensus 63 l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L~~N~l~~l~---~~~l~~L~~L~ 133 (457)
T 3bz5_A 63 LTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCDTNKLTKLD---VSQNPLLTYLN 133 (457)
T ss_dssp CTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEECCSSCCSCCC---CTTCTTCCEEE
T ss_pred cCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEECCCCcCCeec---CCCCCcCCEEE
Confidence 5788888888888884 55 7888888888888888885 44 788888888888888888752 77888888888
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhhhhcCCeecccCCccccCC
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWMLQKGDRVDLSYNSFTAGS 161 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~~L~~l~ls~N~l~~~~ 161 (771)
|++|+|++ ++ ++.+++|++|++++|+..+.+ .+..+++|+.|+|++|++++ +|-.-+++|+.|++++|++++.
T Consensus 134 l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~l~~l~~L~~L~l~~N~l~~~- 206 (457)
T 3bz5_A 134 CARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LDVSQNKLLNRLNCDTNNITKL- 206 (457)
T ss_dssp CTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CCCTTCTTCCEEECCSSCCSCC-
T ss_pred CCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-eccccCCCCCEEECcCCcCCee-
Confidence 88888885 43 667777777777777655555 36667777777777777774 5522266667777777776654
Q ss_pred CcccccccccceeccCCC
Q 004155 162 SETSCQYRSVNLFASSSK 179 (771)
Q Consensus 162 p~~~~~l~~L~~l~~s~~ 179 (771)
.+..+++|+.|+++.+
T Consensus 207 --~l~~l~~L~~L~Ls~N 222 (457)
T 3bz5_A 207 --DLNQNIQLTFLDCSSN 222 (457)
T ss_dssp --CCTTCTTCSEEECCSS
T ss_pred --ccccCCCCCEEECcCC
Confidence 2556666666666544
No 358
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=3.7e-17 Score=161.48 Aligned_cols=130 Identities=19% Similarity=0.291 Sum_probs=119.5
Q ss_pred CEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCC-CccCCCCCcEEEccCCcCcccCChhhhcCCCCcEEEccC
Q 004155 30 EKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFP-PLDKMKKMKTLILRSCNVSGKLPDYLGLMTSLKVLDVSF 108 (771)
Q Consensus 30 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 108 (771)
+.|++++|+|+ .+|..+.. +|+.|+|++|++++.++. .|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 78999999997 88987654 999999999999998875 589999999999999999988899999999999999999
Q ss_pred CCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCccccCCC
Q 004155 109 NKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSFTAGSS 162 (771)
Q Consensus 109 N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l~~~~p 162 (771)
|+|++..|..|..+++|++|+|++|+|++.+|..+ +++|+.|+|++|++++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99998888889999999999999999998888777 8899999999999997654
No 359
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.70 E-value=9.5e-17 Score=156.15 Aligned_cols=133 Identities=22% Similarity=0.263 Sum_probs=114.3
Q ss_pred CcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccC
Q 004155 5 LKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRS 84 (771)
Q Consensus 5 L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 84 (771)
.+.+++++|+++ .+|..+. ++|+.|+|++|++++..+..|..+++|++|+|++|++++.++..|.++++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 467899999998 7886554 7899999999999966666788999999999999999988877889999999999999
Q ss_pred CcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCc
Q 004155 85 CNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIP 140 (771)
Q Consensus 85 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP 140 (771)
|+|++..+..+..+++|+.|+|++|+|++..+..+..+++|++|+|++|.+++..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99996666678889999999999999996555557889999999999999997766
No 360
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.70 E-value=1.8e-18 Score=205.20 Aligned_cols=146 Identities=20% Similarity=0.210 Sum_probs=125.7
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
+++|+.|+|++|+|+ .+|..++++++|++|+|++|.|+ .+|..|++|++|+.|+|++|+++.+ |..|++|++|++|+
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~l-p~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSL-PAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSC-CSSGGGGTTCSEEE
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCcc-ChhhcCCCCCCEEE
Confidence 578999999999999 99999999999999999999999 8999999999999999999999954 78899999999999
Q ss_pred ccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCC-CcEEEcCCCcccccCchhhhhcCCeecccCC
Q 004155 82 LRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLD-VDYIYLTGNLLTGTIPPWMLQKGDRVDLSYN 155 (771)
Q Consensus 82 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~-L~~L~Ls~N~l~g~iP~~~~~~L~~l~ls~N 155 (771)
|++|.|+ .+|..|+.|++|+.|+|++|.|+|.+|..+..+.. +..|+|++|.++|.+|. .|..|+++.|
T Consensus 300 L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~----~l~~l~l~~n 369 (727)
T 4b8c_D 300 FFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH----ERRFIEINTD 369 (727)
T ss_dssp CCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC----C---------
T ss_pred CCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc----ccceeEeecc
Confidence 9999998 89999999999999999999999999988866532 23588999999999885 5667777777
No 361
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.70 E-value=3.8e-18 Score=183.67 Aligned_cols=177 Identities=15% Similarity=0.160 Sum_probs=155.1
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCCcccc-CchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGP-IPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
++|+.|++++|.+++..|. +.++++|++|+|++|.+++. +|..+..+++|+.|+|++|++++..+..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 6799999999999966555 67899999999999999866 888999999999999999998877777888999999999
Q ss_pred ccCC-cCccc-CChhhhcCCCCcEEEccCC-CCCCC-CCccccCCC-CCcEEEcCCC--ccc-ccCchhh--hhcCCeec
Q 004155 82 LRSC-NVSGK-LPDYLGLMTSLKVLDVSFN-KLNGA-IPSTFMGLL-DVDYIYLTGN--LLT-GTIPPWM--LQKGDRVD 151 (771)
Q Consensus 82 Ls~N-~l~g~-~p~~~~~l~~L~~L~Ls~N-~l~g~-ip~~~~~l~-~L~~L~Ls~N--~l~-g~iP~~~--~~~L~~l~ 151 (771)
|++| .+++. +|..+..+++|+.|+|++| .+++. ++..+..++ +|++|+|++| .++ +.+|..+ +++|+.|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 9999 68763 7777899999999999999 99854 677788999 9999999999 555 4667665 88999999
Q ss_pred ccCCc-cccCCCcccccccccceeccCCCC
Q 004155 152 LSYNS-FTAGSSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 152 ls~N~-l~~~~p~~~~~l~~L~~l~~s~~~ 180 (771)
+++|. +++..+..+..+++|+.|+++.+.
T Consensus 229 l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred CCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 99999 787888899999999999998775
No 362
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.70 E-value=2.6e-18 Score=185.01 Aligned_cols=178 Identities=14% Similarity=0.151 Sum_probs=152.8
Q ss_pred CCCCcEEEccCCccccc-CCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCC-CCCCC-CCCCccCCCCCc
Q 004155 2 LVTLKDFRISDNHFTGK-IPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDL-NGTEA-PFPPLDKMKKMK 78 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~-ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~ 78 (771)
+++|+.|+|++|.+++. +|..+..+++|++|+|++|++++..|..++.+++|+.|+|++| .+++. .+..+.++++|+
T Consensus 92 ~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 92 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 68899999999999866 8888999999999999999999889999999999999999999 67652 445578899999
Q ss_pred EEEccCC-cCccc-CChhhhcCC-CCcEEEccCC--CCC-CCCCccccCCCCCcEEEcCCCc-ccccCchhh--hhcCCe
Q 004155 79 TLILRSC-NVSGK-LPDYLGLMT-SLKVLDVSFN--KLN-GAIPSTFMGLLDVDYIYLTGNL-LTGTIPPWM--LQKGDR 149 (771)
Q Consensus 79 ~L~Ls~N-~l~g~-~p~~~~~l~-~L~~L~Ls~N--~l~-g~ip~~~~~l~~L~~L~Ls~N~-l~g~iP~~~--~~~L~~ 149 (771)
+|+|++| ++++. ++..+..++ +|+.|+|++| .++ +.+|..+..+++|+.|+|++|. +++..+..+ +++|+.
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~ 251 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQH 251 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCE
Confidence 9999999 99865 678899999 9999999999 565 5678888899999999999999 776677666 789999
Q ss_pred ecccCCc-cccCCCcccccccccceeccCCC
Q 004155 150 VDLSYNS-FTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 150 l~ls~N~-l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
|++++|. ++......+..+++|+.|+++.+
T Consensus 252 L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 252 LSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp EECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred eeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 9999996 33222236788999999998855
No 363
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.69 E-value=8.9e-19 Score=192.75 Aligned_cols=178 Identities=11% Similarity=0.121 Sum_probs=127.4
Q ss_pred CCCCcEEEccCC---cccccCCccc-------cCCCcCCEEEcccCCccc----cCchhhcCCcCCCEEEcCCCCCCCCC
Q 004155 2 LVTLKDFRISDN---HFTGKIPNFI-------QNWTLLEKLVIQASGLVG----PIPSGIASLSKLTDLRISDLNGTEAP 67 (771)
Q Consensus 2 L~~L~~L~Ls~N---~l~~~ip~~~-------~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~ 67 (771)
+++|+.|+|++| ++++.+|..+ .++++|++|+|++|.|++ .+|..+..+++|+.|+|++|.++...
T Consensus 59 ~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~ 138 (386)
T 2ca6_A 59 KKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQA 138 (386)
T ss_dssp CTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHH
T ss_pred CCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHH
Confidence 577888888884 5556667655 678888888888888886 47778888888888888888876433
Q ss_pred CCCcc----CC---------CCCcEEEccCCcCc-ccCC---hhhhcCCCCcEEEccCCCCC--C---CCCccccCCCCC
Q 004155 68 FPPLD----KM---------KKMKTLILRSCNVS-GKLP---DYLGLMTSLKVLDVSFNKLN--G---AIPSTFMGLLDV 125 (771)
Q Consensus 68 ~~~~~----~l---------~~L~~L~Ls~N~l~-g~~p---~~~~~l~~L~~L~Ls~N~l~--g---~ip~~~~~l~~L 125 (771)
+..+. .+ ++|++|+|++|+++ +.+| ..+..+++|+.|+|++|+|+ | .+|..+..+++|
T Consensus 139 ~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L 218 (386)
T 2ca6_A 139 GAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQEL 218 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTC
T ss_pred HHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCc
Confidence 33333 23 78888888888886 4455 45667788888888888877 2 344467778888
Q ss_pred cEEEcCCCccc----ccCchhh--hhcCCeecccCCccccC----CCcccc--cccccceeccCCC
Q 004155 126 DYIYLTGNLLT----GTIPPWM--LQKGDRVDLSYNSFTAG----SSETSC--QYRSVNLFASSSK 179 (771)
Q Consensus 126 ~~L~Ls~N~l~----g~iP~~~--~~~L~~l~ls~N~l~~~----~p~~~~--~l~~L~~l~~s~~ 179 (771)
+.|+|++|.++ +.+|..+ +++|+.|+|++|.+++. +|..+. .+++|+.|+++.|
T Consensus 219 ~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n 284 (386)
T 2ca6_A 219 KVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYN 284 (386)
T ss_dssp CEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSS
T ss_pred cEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCC
Confidence 88888888875 4566655 67788888888887765 445552 3677777777654
No 364
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=1.1e-16 Score=154.14 Aligned_cols=136 Identities=20% Similarity=0.229 Sum_probs=121.8
Q ss_pred CCCCcEEEccCCccc-ccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEE
Q 004155 2 LVTLKDFRISDNHFT-GKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTL 80 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~-~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 80 (771)
.++|+.|+|++|+|+ +.+|..+..+++|++|+|++|.|++. ..+..+++|++|+|++|++++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 468999999999998 88999899999999999999999965 789999999999999999999877777789999999
Q ss_pred EccCCcCcccCC--hhhhcCCCCcEEEccCCCCCCCCC---ccccCCCCCcEEEcCCCcccccCch
Q 004155 81 ILRSCNVSGKLP--DYLGLMTSLKVLDVSFNKLNGAIP---STFMGLLDVDYIYLTGNLLTGTIPP 141 (771)
Q Consensus 81 ~Ls~N~l~g~~p--~~~~~l~~L~~L~Ls~N~l~g~ip---~~~~~l~~L~~L~Ls~N~l~g~iP~ 141 (771)
+|++|+|+ .+| ..+..+++|+.|+|++|.+++..+ ..+..+++|++|++++|.+. .+|.
T Consensus 101 ~Ls~N~l~-~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 101 NLSGNKLK-DISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp ECBSSSCC-SSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred eccCCccC-cchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 99999999 444 789999999999999999995544 37999999999999999998 6664
No 365
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.68 E-value=1.8e-17 Score=186.03 Aligned_cols=166 Identities=14% Similarity=0.148 Sum_probs=97.7
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCC-------------CEEEcCCCCCCCCCC
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKL-------------TDLRISDLNGTEAPF 68 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-------------~~L~L~~n~l~~~~~ 68 (771)
.++|++|++++|+| |.+|..|++|++|++|+|++|+++|.+|.+++++.+| +.|++++|.+++.+.
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~ 88 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPE 88 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCS
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCC
Confidence 46789999999999 6999999999999999999999999999988887764 777777777776442
Q ss_pred CCccCCCCCcEEEccCCcCcccCChhhh----------------cC-CCCcEEEccCCCCCCCCCccccCCCCCcEEEcC
Q 004155 69 PPLDKMKKMKTLILRSCNVSGKLPDYLG----------------LM-TSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLT 131 (771)
Q Consensus 69 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~----------------~l-~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls 131 (771)
. .++|++|+|++|++++ +|..+. .+ ++|++|+|++|++++ +| .|+.+++|++|+++
T Consensus 89 -~---~~~L~~L~l~~n~l~~-lp~~~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~ 161 (454)
T 1jl5_A 89 -L---PPHLESLVASCNSLTE-LPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVD 161 (454)
T ss_dssp -C---CTTCSEEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred -C---cCCCCEEEccCCcCCc-cccccCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECC
Confidence 1 2455666666666553 443221 11 467777777777774 66 47777777777777
Q ss_pred CCcccccCchhhhhcCCeecccCCccccCCCcccccccccceeccCCC
Q 004155 132 GNLLTGTIPPWMLQKGDRVDLSYNSFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 132 ~N~l~g~iP~~~~~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
+|++++ +|.. ..+|+.|++++|++++ +| .+..+++|+.|+++.+
T Consensus 162 ~N~l~~-lp~~-~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N 205 (454)
T 1jl5_A 162 NNSLKK-LPDL-PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNN 205 (454)
T ss_dssp SSCCSC-CCCC-CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSS
T ss_pred CCcCcc-cCCC-cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCC
Confidence 777774 5543 3577777777777776 44 4777777777776644
No 366
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.68 E-value=2.8e-18 Score=188.80 Aligned_cols=180 Identities=17% Similarity=0.157 Sum_probs=148.8
Q ss_pred CCCCcEEEccCCcccccC----CccccCCCcCCEEEcccC---CccccCchhh-------cCCcCCCEEEcCCCCCCC--
Q 004155 2 LVTLKDFRISDNHFTGKI----PNFIQNWTLLEKLVIQAS---GLVGPIPSGI-------ASLSKLTDLRISDLNGTE-- 65 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~i----p~~~~~l~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~L~~n~l~~-- 65 (771)
+++|+.|+|++|+|++.. +..+.++++|++|+|++| ++++.+|..+ ..+++|++|+|++|+++.
T Consensus 31 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 110 (386)
T 2ca6_A 31 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 110 (386)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHH
Confidence 578999999999999663 445778999999999995 5666777766 789999999999999988
Q ss_pred --CCCCCccCCCCCcEEEccCCcCcccCChhhh----cC---------CCCcEEEccCCCCC-CCCC---ccccCCCCCc
Q 004155 66 --APFPPLDKMKKMKTLILRSCNVSGKLPDYLG----LM---------TSLKVLDVSFNKLN-GAIP---STFMGLLDVD 126 (771)
Q Consensus 66 --~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~----~l---------~~L~~L~Ls~N~l~-g~ip---~~~~~l~~L~ 126 (771)
..+..+..+++|++|+|++|+|++..+..+. .+ ++|++|+|++|+++ +.+| ..+..+++|+
T Consensus 111 ~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~ 190 (386)
T 2ca6_A 111 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLH 190 (386)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcC
Confidence 3455788899999999999999755444444 34 89999999999998 5566 4677899999
Q ss_pred EEEcCCCccc--c---cCchhh--hhcCCeecccCCccc----cCCCcccccccccceeccCCCCC
Q 004155 127 YIYLTGNLLT--G---TIPPWM--LQKGDRVDLSYNSFT----AGSSETSCQYRSVNLFASSSKGN 181 (771)
Q Consensus 127 ~L~Ls~N~l~--g---~iP~~~--~~~L~~l~ls~N~l~----~~~p~~~~~l~~L~~l~~s~~~~ 181 (771)
.|+|++|+++ | .+|..+ +++|+.|+|++|.++ ..+|..+..+++|+.|+++.|.-
T Consensus 191 ~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i 256 (386)
T 2ca6_A 191 TVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLL 256 (386)
T ss_dssp EEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCC
T ss_pred EEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCC
Confidence 9999999998 3 344244 789999999999997 66888899999999999986653
No 367
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.68 E-value=2.4e-17 Score=155.56 Aligned_cols=127 Identities=21% Similarity=0.143 Sum_probs=104.9
Q ss_pred CCcCCEEEcccCCcc-ccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCCcCcccCChhhhcCCCCcEE
Q 004155 26 WTLLEKLVIQASGLV-GPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSCNVSGKLPDYLGLMTSLKVL 104 (771)
Q Consensus 26 l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 104 (771)
.++|+.|+|++|.++ +.+|..+..+++|+.|+|++|++++. ..+..+++|++|+|++|++++.+|..+..+++|+.|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 477888888888888 78888888888899999988888877 678888999999999999987788888889999999
Q ss_pred EccCCCCCCC-CCccccCCCCCcEEEcCCCcccccCc---hhh--hhcCCeecccC
Q 004155 105 DVSFNKLNGA-IPSTFMGLLDVDYIYLTGNLLTGTIP---PWM--LQKGDRVDLSY 154 (771)
Q Consensus 105 ~Ls~N~l~g~-ip~~~~~l~~L~~L~Ls~N~l~g~iP---~~~--~~~L~~l~ls~ 154 (771)
+|++|++++. .|..+..+++|++|++++|++++..+ ..+ +++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999853 34778889999999999999985444 234 78888888864
No 368
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=1.4e-16 Score=150.33 Aligned_cols=128 Identities=20% Similarity=0.222 Sum_probs=96.5
Q ss_pred CCCcEEEccCCccc-ccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 3 VTLKDFRISDNHFT-GKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~-~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
++|+.|++++|+++ +.+|..+..+++|++|+|++|.|++. ..++.+++|++|+|++|++++..|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 56788888888887 67777777888888888888888754 6677788888888888888776666666788888888
Q ss_pred ccCCcCccc-CChhhhcCCCCcEEEccCCCCCCCCC---ccccCCCCCcEEEcCC
Q 004155 82 LRSCNVSGK-LPDYLGLMTSLKVLDVSFNKLNGAIP---STFMGLLDVDYIYLTG 132 (771)
Q Consensus 82 Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~ip---~~~~~l~~L~~L~Ls~ 132 (771)
|++|++++. .|..+..+++|++|++++|.+++..+ ..+..+++|+.|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 888888742 33677788888888888888875444 3677788888887753
No 369
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.67 E-value=1.1e-16 Score=173.54 Aligned_cols=176 Identities=14% Similarity=0.101 Sum_probs=131.6
Q ss_pred CCCCcEEEccCCcccccCCc-cccCCCcCCEEEcccCCccccCch-hhcCCcCCCE-EEcCCCCCCCCCCCCccCCCCCc
Q 004155 2 LVTLKDFRISDNHFTGKIPN-FIQNWTLLEKLVIQASGLVGPIPS-GIASLSKLTD-LRISDLNGTEAPFPPLDKMKKMK 78 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~-~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~-L~L~~n~l~~~~~~~~~~l~~L~ 78 (771)
.++|++|+|++|+|+ .||. .|.++++|++|+|++|++.+.+|. .|.+|++|.. +.+++|+++.+++..|..+++|+
T Consensus 29 ~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~ 107 (350)
T 4ay9_X 29 PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQ 107 (350)
T ss_dssp CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCC
T ss_pred CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccc
Confidence 357999999999999 6665 689999999999999998777764 6788988775 66677999999888999999999
Q ss_pred EEEccCCcCcccCChhhhcCCCCcEEEccC-CCCCCCCCccccCCC-CCcEEEcCCCcccccCchhh--hhcCCeecccC
Q 004155 79 TLILRSCNVSGKLPDYLGLMTSLKVLDVSF-NKLNGAIPSTFMGLL-DVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSY 154 (771)
Q Consensus 79 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~ip~~~~~l~-~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~ 154 (771)
+|++++|+|.+..+..+....++..|++++ |++....+..|..+. .|+.|+|++|+|+ .+|... ..+|..|++++
T Consensus 108 ~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~ 186 (350)
T 4ay9_X 108 YLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSD 186 (350)
T ss_dssp EEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTT
T ss_pred cccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhcc
Confidence 999999999855555666666777777754 556533334555554 5777888888887 455443 55677777764
Q ss_pred -CccccCCCcccccccccceeccCCC
Q 004155 155 -NSFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 155 -N~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
|.++...++.+..+++|+.|+++.|
T Consensus 187 ~n~l~~i~~~~f~~l~~L~~LdLs~N 212 (350)
T 4ay9_X 187 NNNLEELPNDVFHGASGPVILDISRT 212 (350)
T ss_dssp CTTCCCCCTTTTTTEECCSEEECTTS
T ss_pred CCcccCCCHHHhccCcccchhhcCCC
Confidence 4555444456777777888877755
No 370
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.66 E-value=5.9e-16 Score=179.57 Aligned_cols=158 Identities=22% Similarity=0.206 Sum_probs=77.3
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLI 81 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 81 (771)
+++|+.|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|+.|+|++|+++.++. .+++|++|+
T Consensus 80 l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~l~~---~l~~L~~L~L~~N~l~~lp~----~l~~L~~L~ 147 (622)
T 3g06_A 80 PPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLT-HLPA---LPSGLCKLWIFGNQLTSLPV----LPPGLQELS 147 (622)
T ss_dssp CTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCC-CCCC---CCTTCCEEECCSSCCSCCCC----CCTTCCEEE
T ss_pred CCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCC-CCCC---CCCCcCEEECCCCCCCcCCC----CCCCCCEEE
Confidence 456667777777666 5555 4456666666666665 2343 23444444444444444321 123344444
Q ss_pred ccCCcCcccCChhh---hc--------------CCCCcEEEccCCCCCCCCCccccC-----------------CCCCcE
Q 004155 82 LRSCNVSGKLPDYL---GL--------------MTSLKVLDVSFNKLNGAIPSTFMG-----------------LLDVDY 127 (771)
Q Consensus 82 Ls~N~l~g~~p~~~---~~--------------l~~L~~L~Ls~N~l~g~ip~~~~~-----------------l~~L~~ 127 (771)
|++|+|++ +|..+ .. +++|+.|+|++|+|++ +|..+.+ +++|+.
T Consensus 148 Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~ 225 (622)
T 3g06_A 148 VSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTSLPALPSGLKE 225 (622)
T ss_dssp CCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSSCCCCCTTCCE
T ss_pred CcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCCccchhhEEECcCCcccccCCCCCCCCE
Confidence 44444331 22111 11 1444445555554442 2221111 245666
Q ss_pred EEcCCCcccccCchhhhhcCCeecccCCccccCCCcccccccccceeccCCC
Q 004155 128 IYLTGNLLTGTIPPWMLQKGDRVDLSYNSFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 128 L~Ls~N~l~g~iP~~~~~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
|+|++|+|+ .+| ..+++|+.|+|++|+|+. +|. .+++|+.|+++.|
T Consensus 226 L~Ls~N~L~-~lp-~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N 271 (622)
T 3g06_A 226 LIVSGNRLT-SLP-VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRN 271 (622)
T ss_dssp EECCSSCCS-CCC-CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSS
T ss_pred EEccCCccC-cCC-CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCC
Confidence 666666666 355 234566666666666663 333 3455666665543
No 371
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.66 E-value=2.8e-17 Score=179.12 Aligned_cols=177 Identities=15% Similarity=0.069 Sum_probs=109.7
Q ss_pred CCCcEEEccCCcccccCC----ccccCCC-cCCEEEcccCCccccCchhhcCC-----cCCCEEEcCCCCCCCCCCCCc-
Q 004155 3 VTLKDFRISDNHFTGKIP----NFIQNWT-LLEKLVIQASGLVGPIPSGIASL-----SKLTDLRISDLNGTEAPFPPL- 71 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~n~l~~~~~~~~- 71 (771)
++|++|+|++|+|++..+ ..+.+++ +|++|+|++|+|++..+..|..+ ++|+.|+|++|+++...+..+
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 447777777777774444 5566666 67777777777776666666654 677777777777766554433
Q ss_pred ---cCC-CCCcEEEccCCcCcccCChhhhc-----CCCCcEEEccCCCCCCCC----CccccCCC-CCcEEEcCCCcccc
Q 004155 72 ---DKM-KKMKTLILRSCNVSGKLPDYLGL-----MTSLKVLDVSFNKLNGAI----PSTFMGLL-DVDYIYLTGNLLTG 137 (771)
Q Consensus 72 ---~~l-~~L~~L~Ls~N~l~g~~p~~~~~-----l~~L~~L~Ls~N~l~g~i----p~~~~~l~-~L~~L~Ls~N~l~g 137 (771)
..+ ++|++|+|++|+|++..+..+.. .++|++|+|++|.|++.. +..+..++ +|++|+|++|++++
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 333 67777777777776544444332 257777777777776432 23334444 77777777777775
Q ss_pred cCchhh------h-hcCCeecccCCccccC----CCccccc-ccccceeccCCC
Q 004155 138 TIPPWM------L-QKGDRVDLSYNSFTAG----SSETSCQ-YRSVNLFASSSK 179 (771)
Q Consensus 138 ~iP~~~------~-~~L~~l~ls~N~l~~~----~p~~~~~-l~~L~~l~~s~~ 179 (771)
..+..+ . ++|+.|+|++|.++.. ++..+.. .++|+.|+++.|
T Consensus 182 ~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N 235 (362)
T 3goz_A 182 KNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLN 235 (362)
T ss_dssp SCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSS
T ss_pred hhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCC
Confidence 555433 1 4677777777777653 3333433 246777776654
No 372
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.64 E-value=1.5e-15 Score=170.40 Aligned_cols=120 Identities=19% Similarity=0.224 Sum_probs=67.4
Q ss_pred CcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCCcCcccCChhhhcCCCCcEEEc
Q 004155 27 TLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSCNVSGKLPDYLGLMTSLKVLDV 106 (771)
Q Consensus 27 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 106 (771)
++|++|+|++|++++ +| +|+++++|++|++++|++++.+ .. ..+|++|+|++|++++ +| .++++++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp-~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLP-DL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCC-CC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccC-CC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 456666666666663 55 4666666666666666666532 22 2356666666666663 45 4566666666666
Q ss_pred cCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh-hhcCCeecccCCcccc
Q 004155 107 SFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM-LQKGDRVDLSYNSFTA 159 (771)
Q Consensus 107 s~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~-~~~L~~l~ls~N~l~~ 159 (771)
++|++++ +|... ++|++|++++|+++ .+|... +++|+.|++++|++++
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~l~~ 251 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLKT 251 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCSS
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCC-cccccCCCCCCCEEECCCCcCCc
Confidence 6666653 44322 35555555555555 455311 4555555555555554
No 373
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.63 E-value=6.5e-17 Score=176.26 Aligned_cols=174 Identities=17% Similarity=0.165 Sum_probs=145.1
Q ss_pred EEEccCCcccccCCccccCCCcCCEEEcccCCccccCc----hhhcCCc-CCCEEEcCCCCCCCCCCCCccCC-----CC
Q 004155 7 DFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIP----SGIASLS-KLTDLRISDLNGTEAPFPPLDKM-----KK 76 (771)
Q Consensus 7 ~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l-----~~ 76 (771)
.++|+.|+++|.+|..+...++|++|+|++|.|++..+ ..|..++ +|+.|+|++|+++...+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 57899999999999987777889999999999997666 7888999 99999999999999877777765 99
Q ss_pred CcEEEccCCcCcccCChhhhc----C-CCCcEEEccCCCCCCCCCcccc----C-CCCCcEEEcCCCcccccCchhh---
Q 004155 77 MKTLILRSCNVSGKLPDYLGL----M-TSLKVLDVSFNKLNGAIPSTFM----G-LLDVDYIYLTGNLLTGTIPPWM--- 143 (771)
Q Consensus 77 L~~L~Ls~N~l~g~~p~~~~~----l-~~L~~L~Ls~N~l~g~ip~~~~----~-l~~L~~L~Ls~N~l~g~iP~~~--- 143 (771)
|++|+|++|++++..+..++. + ++|+.|+|++|+|++..+..+. . .++|++|+|++|++++..+..+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 999999999999777765554 4 8999999999999966655443 3 3699999999999996444333
Q ss_pred ---h-hcCCeecccCCccccCCCcccccc-----cccceeccCCCC
Q 004155 144 ---L-QKGDRVDLSYNSFTAGSSETSCQY-----RSVNLFASSSKG 180 (771)
Q Consensus 144 ---~-~~L~~l~ls~N~l~~~~p~~~~~l-----~~L~~l~~s~~~ 180 (771)
. .+|+.|+|++|++++..+..++.. ++|+.|+++.|.
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 207 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANL 207 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCC
Confidence 2 489999999999998887666554 689999998664
No 374
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.63 E-value=6.5e-16 Score=167.52 Aligned_cols=173 Identities=17% Similarity=0.113 Sum_probs=143.2
Q ss_pred CCCCcEEEccCCcccccCCc-cccCCCcCCE-EEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcE
Q 004155 2 LVTLKDFRISDNHFTGKIPN-FIQNWTLLEK-LVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKT 79 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~-~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 79 (771)
|++|++|+|++|++.+.+|. .|.++++|.. +.++.|+|+...|..|..|++|++|++++|++...++..+....++..
T Consensus 53 l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~ 132 (350)
T 4ay9_X 53 FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVL 132 (350)
T ss_dssp CTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEE
T ss_pred CCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhh
Confidence 78999999999999877875 6788988765 777889999777889999999999999999999998888888888999
Q ss_pred EEccC-CcCcccCChhhhcCC-CCcEEEccCCCCCCCCCccccCCCCCcEEEcCC-CcccccCchhh---hhcCCeeccc
Q 004155 80 LILRS-CNVSGKLPDYLGLMT-SLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTG-NLLTGTIPPWM---LQKGDRVDLS 153 (771)
Q Consensus 80 L~Ls~-N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~-N~l~g~iP~~~---~~~L~~l~ls 153 (771)
|++.+ |++....+..|..+. .|+.|+|++|+|+ .+|.......+|+.|++++ |.++ .+|... +++|+.|||+
T Consensus 133 l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs 210 (350)
T 4ay9_X 133 LDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDIS 210 (350)
T ss_dssp EEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECT
T ss_pred hhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCccc-CCCHHHhccCcccchhhcC
Confidence 99966 567744445666664 6899999999999 6777666778999999986 5565 788643 8899999999
Q ss_pred CCccccCCCcccccccccceecc
Q 004155 154 YNSFTAGSSETSCQYRSVNLFAS 176 (771)
Q Consensus 154 ~N~l~~~~p~~~~~l~~L~~l~~ 176 (771)
+|+|+...+..+.++++|+.+++
T Consensus 211 ~N~l~~lp~~~~~~L~~L~~l~~ 233 (350)
T 4ay9_X 211 RTRIHSLPSYGLENLKKLRARST 233 (350)
T ss_dssp TSCCCCCCSSSCTTCCEEECTTC
T ss_pred CCCcCccChhhhccchHhhhccC
Confidence 99999877777777777776654
No 375
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=1.5e-15 Score=147.73 Aligned_cols=131 Identities=21% Similarity=0.284 Sum_probs=114.9
Q ss_pred cCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCCcCcccCChhhhcCCCCcEEEcc
Q 004155 28 LLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSCNVSGKLPDYLGLMTSLKVLDVS 107 (771)
Q Consensus 28 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 107 (771)
..+.+++++|+++ .+|..+ .++|+.|+|++|++++.++..|.++++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 8 ~~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 8 SGTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp ETTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 3578999999998 678655 4799999999999999888889999999999999999996666678999999999999
Q ss_pred CCCCCCCCCccccCCCCCcEEEcCCCcccccCchh-h--hhcCCeecccCCccccCCC
Q 004155 108 FNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPW-M--LQKGDRVDLSYNSFTAGSS 162 (771)
Q Consensus 108 ~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~-~--~~~L~~l~ls~N~l~~~~p 162 (771)
+|+|++..+..|..+++|++|+|++|+|++ +|.. + +++|+.|+|++|++++..|
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceE-eCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999997777778999999999999999994 5554 3 7889999999999997655
No 376
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=1.1e-15 Score=150.86 Aligned_cols=127 Identities=24% Similarity=0.323 Sum_probs=113.0
Q ss_pred CCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCCcCcccCChhhhcCCCCcEEEccC
Q 004155 29 LEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSCNVSGKLPDYLGLMTSLKVLDVSF 108 (771)
Q Consensus 29 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 108 (771)
-+.+++++|+|+ .+|..+. ++|+.|+|++|+++.++ ..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++
T Consensus 12 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~ip-~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 12 DTVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTLVP-KELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCSCC-GGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCchhH-HHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 368999999998 7887664 68999999999999765 7899999999999999999977778899999999999999
Q ss_pred CCCCCCCCccccCCCCCcEEEcCCCcccccCch-hh--hhcCCeecccCCccccC
Q 004155 109 NKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPP-WM--LQKGDRVDLSYNSFTAG 160 (771)
Q Consensus 109 N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~-~~--~~~L~~l~ls~N~l~~~ 160 (771)
|+|++..|..|..+++|+.|+|++|+|+ .+|. .+ +++|+.|+|++|++.+.
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCC-eeChhhhhcCccccEEEeCCCCeecC
Confidence 9999877888999999999999999999 4555 44 78999999999999863
No 377
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.62 E-value=2.7e-16 Score=152.86 Aligned_cols=132 Identities=13% Similarity=0.156 Sum_probs=110.9
Q ss_pred cccCCCcCCEEEcccCCccccCchhhcCCc-CCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCCcCcccCChhhhcCCC
Q 004155 22 FIQNWTLLEKLVIQASGLVGPIPSGIASLS-KLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSCNVSGKLPDYLGLMTS 100 (771)
Q Consensus 22 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 100 (771)
.+.++.+|+.|+|++|+++ .+|. +..+. +|++|+|++|++++. +.|..+++|++|+|++|+|++..|..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 3677889999999999998 5665 55554 999999999999886 67889999999999999999544455689999
Q ss_pred CcEEEccCCCCCCCCCc--cccCCCCCcEEEcCCCcccccCchh----h--hhcCCeecccCCcccc
Q 004155 101 LKVLDVSFNKLNGAIPS--TFMGLLDVDYIYLTGNLLTGTIPPW----M--LQKGDRVDLSYNSFTA 159 (771)
Q Consensus 101 L~~L~Ls~N~l~g~ip~--~~~~l~~L~~L~Ls~N~l~g~iP~~----~--~~~L~~l~ls~N~l~~ 159 (771)
|++|+|++|+|+ .+|. .+..+++|+.|+|++|.++ .+|.. + +++|+.||+++|.+..
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 999999999997 6776 7889999999999999998 67764 4 7889999999998764
No 378
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62 E-value=4.5e-16 Score=167.96 Aligned_cols=138 Identities=12% Similarity=0.165 Sum_probs=101.3
Q ss_pred CCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCCh--------------hcH--------HHHHHHHHHHHcCCCCcE
Q 004155 422 NFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSK--------------QGN--------REFVNEIGMISALQHPNL 479 (771)
Q Consensus 422 ~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~--------------~~~--------~~~~~E~~~l~~l~h~ni 479 (771)
-|++.++||+|+||.||+|...+|+.||||+++.... ... ....+|...|.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3888999999999999999888999999998753200 001 112456777777755443
Q ss_pred EeEEEEEEeCCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcC
Q 004155 480 VKLHGCCIEGNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDK 559 (771)
Q Consensus 480 v~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~ 559 (771)
.-..-+... ..+|||||++|++|.++. ..+....++.|++.+|.|||+. +||||||||.|||+++
T Consensus 176 ~vp~p~~~~--~~~LVME~i~G~~L~~l~----------~~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 176 PVPEPIAQS--RHTIVMSLVDALPMRQVS----------SVPDPASLYADLIALILRLAKH---GLIHGDFNEFNILIRE 240 (397)
T ss_dssp SCCCEEEEE--TTEEEEECCSCEEGGGCC----------CCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEE
T ss_pred CCCeeeecc--CceEEEEecCCccHhhhc----------ccHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeC
Confidence 221111122 237999999998876554 1224567899999999999998 8999999999999987
Q ss_pred CC----------CeEEEeecCcccc
Q 004155 560 DL----------NPKISDFGLAKLD 574 (771)
Q Consensus 560 ~~----------~~kl~DFGla~~~ 574 (771)
++ .+.|+||+-+...
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCCcccccccccceEEEEeCCcccC
Confidence 76 3899999987643
No 379
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.62 E-value=4e-15 Score=172.60 Aligned_cols=155 Identities=21% Similarity=0.210 Sum_probs=124.2
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEc
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLIL 82 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 82 (771)
++|+.|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|++|++++.+. .+++|+.|+|
T Consensus 61 ~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l~~----~l~~L~~L~L 128 (622)
T 3g06_A 61 AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTHLPA----LPSGLCKLWI 128 (622)
T ss_dssp TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCCCCC----CCTTCCEEEC
T ss_pred CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCCCCC----CCCCcCEEEC
Confidence 68999999999999 7887 5789999999999998 6776 78999999999999998764 5789999999
Q ss_pred cCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCC-----------------CCCcEEEcCCCcccccCchhh--
Q 004155 83 RSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGL-----------------LDVDYIYLTGNLLTGTIPPWM-- 143 (771)
Q Consensus 83 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l-----------------~~L~~L~Ls~N~l~g~iP~~~-- 143 (771)
++|+|+ .+|.. +++|++|+|++|+|++ +|..+.+| ++|+.|+|++|+|++ +|..+
T Consensus 129 ~~N~l~-~lp~~---l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~~~~~ 202 (622)
T 3g06_A 129 FGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPTLPSE 202 (622)
T ss_dssp CSSCCS-CCCCC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCCCCTT
T ss_pred CCCCCC-cCCCC---CCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCCccch
Confidence 999999 57764 4889999999999984 44433332 788899999998884 44321
Q ss_pred -----------------hhcCCeecccCCccccCCCcccccccccceeccCCC
Q 004155 144 -----------------LQKGDRVDLSYNSFTAGSSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 144 -----------------~~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s~~ 179 (771)
+++|+.|+|++|.|++ +| ..+++|+.|+++.|
T Consensus 203 L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N 251 (622)
T 3g06_A 203 LYKLWAYNNRLTSLPALPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGN 251 (622)
T ss_dssp CCEEECCSSCCSSCCCCCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSS
T ss_pred hhEEECcCCcccccCCCCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCC
Confidence 2567788888888876 44 34577888888765
No 380
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.60 E-value=2.1e-15 Score=146.46 Aligned_cols=129 Identities=15% Similarity=0.134 Sum_probs=108.2
Q ss_pred CCCCcEEEccCCcccccCCccccCCC-cCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEE
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWT-LLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTL 80 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 80 (771)
+.+|+.|+|++|+|+ .+|. +..+. +|++|+|++|+|++. ..|..+++|++|+|++|++++.++..|..+++|++|
T Consensus 18 ~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 567899999999998 6665 55554 899999999999864 678889999999999999988765556889999999
Q ss_pred EccCCcCcccCCh--hhhcCCCCcEEEccCCCCCCCCCcc----ccCCCCCcEEEcCCCccc
Q 004155 81 ILRSCNVSGKLPD--YLGLMTSLKVLDVSFNKLNGAIPST----FMGLLDVDYIYLTGNLLT 136 (771)
Q Consensus 81 ~Ls~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~ip~~----~~~l~~L~~L~Ls~N~l~ 136 (771)
+|++|+|+ .+|. .+..+++|+.|+|++|.++ .+|.. +..+++|+.|++++|.+.
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 99999996 6776 7888999999999999998 66764 888999999999998876
No 381
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=1.5e-17 Score=165.03 Aligned_cols=132 Identities=15% Similarity=0.187 Sum_probs=82.5
Q ss_pred CCCcEEEccCCcccccCCc------cccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCC
Q 004155 3 VTLKDFRISDNHFTGKIPN------FIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKK 76 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 76 (771)
.+++.++|+.|.++|.+|. .++.+++|++|+|++|+|++ +| .+..+++|+.|+|++|+++.. |..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l-~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKI-ENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSC-SSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccc-cchhhcCCc
Confidence 3455666666666666665 66666666777776666664 55 666666666666666666643 344555566
Q ss_pred CcEEEccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCC--ccccCCCCCcEEEcCCCcccccCc
Q 004155 77 MKTLILRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIP--STFMGLLDVDYIYLTGNLLTGTIP 140 (771)
Q Consensus 77 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip--~~~~~l~~L~~L~Ls~N~l~g~iP 140 (771)
|++|+|++|+|++ +| .+..+++|+.|+|++|++++ +| ..+..+++|++|++++|.+++.+|
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCC-HHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCc-hhHHHHHhcCCCCCEEEecCCccccccc
Confidence 6666666666663 44 46666666666666666663 32 246666666666666666665544
No 382
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.55 E-value=1.8e-14 Score=139.03 Aligned_cols=109 Identities=18% Similarity=0.200 Sum_probs=85.6
Q ss_pred CCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCCcCcccCChhhhcCCCCcEEEccC
Q 004155 29 LEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSCNVSGKLPDYLGLMTSLKVLDVSF 108 (771)
Q Consensus 29 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 108 (771)
.+.|++++|+|+ .+|..+. ++|+.|+|++|++++.++..|.++++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 467777777777 5776553 6788888888888887777788888888888888888855555678888888888888
Q ss_pred CCCCCCCCccccCCCCCcEEEcCCCcccccCc
Q 004155 109 NKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIP 140 (771)
Q Consensus 109 N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP 140 (771)
|+|++..+..|..+++|+.|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 88886656668888899999999998886544
No 383
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.54 E-value=2.9e-16 Score=176.65 Aligned_cols=178 Identities=16% Similarity=0.184 Sum_probs=100.4
Q ss_pred CCCCcEEEccCCcccccCCcccc-----CCCcCCEEEcccCCcccc----CchhhcCCcCCCEEEcCCCCCCCCC-----
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQ-----NWTLLEKLVIQASGLVGP----IPSGIASLSKLTDLRISDLNGTEAP----- 67 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~-----~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~----- 67 (771)
+++|++|+|++|.++...+..+. .+++|++|+|++|.+++. ++..+..+++|+.|+|++|.+....
T Consensus 169 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~ 248 (461)
T 1z7x_W 169 KPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELC 248 (461)
T ss_dssp CTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHH
T ss_pred CCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHH
Confidence 45677777777776643333332 245677777777777642 4666666777777777777665421
Q ss_pred CCCccCCCCCcEEEccCCcCccc----CChhhhcCCCCcEEEccCCCCCCCCCccccC-----CCCCcEEEcCCCccccc
Q 004155 68 FPPLDKMKKMKTLILRSCNVSGK----LPDYLGLMTSLKVLDVSFNKLNGAIPSTFMG-----LLDVDYIYLTGNLLTGT 138 (771)
Q Consensus 68 ~~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~-----l~~L~~L~Ls~N~l~g~ 138 (771)
+..+..+++|++|+|++|+++.. ++..+..+++|+.|+|++|.+++..+..+.. .++|+.|+|++|.+++.
T Consensus 249 ~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~ 328 (461)
T 1z7x_W 249 PGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAA 328 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGG
T ss_pred HHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchH
Confidence 11222466677777777766643 5555666666777777776665332222221 24666666666666543
Q ss_pred ----Cchhh--hhcCCeecccCCccccCCCccccc-----ccccceeccCCC
Q 004155 139 ----IPPWM--LQKGDRVDLSYNSFTAGSSETSCQ-----YRSVNLFASSSK 179 (771)
Q Consensus 139 ----iP~~~--~~~L~~l~ls~N~l~~~~p~~~~~-----l~~L~~l~~s~~ 179 (771)
+|..+ .++|+.|+|++|.++...+..++. .++|+.|+++.+
T Consensus 329 ~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n 380 (461)
T 1z7x_W 329 CCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADC 380 (461)
T ss_dssp GHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCC
Confidence 23322 355666666666665544443332 345566655543
No 384
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.54 E-value=3.2e-14 Score=137.85 Aligned_cols=107 Identities=21% Similarity=0.241 Sum_probs=84.2
Q ss_pred CCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCCcCcccCChhhhcCCCCcEEEccC
Q 004155 29 LEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSCNVSGKLPDYLGLMTSLKVLDVSF 108 (771)
Q Consensus 29 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 108 (771)
-+.+++++|+|+ .+|..+. ++|+.|+|++|++++.+|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 367788888886 6777664 7788888888888888777888888888888888888854444567888888888888
Q ss_pred CCCCCCCCccccCCCCCcEEEcCCCccccc
Q 004155 109 NKLNGAIPSTFMGLLDVDYIYLTGNLLTGT 138 (771)
Q Consensus 109 N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ 138 (771)
|+|++..+..|..+++|+.|+|++|.+...
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 888855555588888999999999988843
No 385
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.54 E-value=1.6e-14 Score=166.09 Aligned_cols=136 Identities=15% Similarity=0.119 Sum_probs=111.1
Q ss_pred cEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCC
Q 004155 6 KDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSC 85 (771)
Q Consensus 6 ~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 85 (771)
..+++++|.|+ .+|. ..|+.|+|++|+|++ +|. |+.|++|+.|+|++|+++.+ |..|+++++|+.|+|++|
T Consensus 426 ~~l~l~~n~i~-~l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~l-p~~~~~l~~L~~L~Ls~N 496 (567)
T 1dce_A 426 RSKFLLENSVL-KMEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRAL-PPALAALRCLEVLQASDN 496 (567)
T ss_dssp HHHHHHHHHHH-HHHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCC-CGGGGGCTTCCEEECCSS
T ss_pred hhhhhhccccc-ccCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccccc-chhhhcCCCCCEEECCCC
Confidence 33445555565 3333 258999999999995 786 99999999999999999954 578999999999999999
Q ss_pred cCcccCChhhhcCCCCcEEEccCCCCCCCC-CccccCCCCCcEEEcCCCcccccCchh--h---hhcCCeecc
Q 004155 86 NVSGKLPDYLGLMTSLKVLDVSFNKLNGAI-PSTFMGLLDVDYIYLTGNLLTGTIPPW--M---LQKGDRVDL 152 (771)
Q Consensus 86 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i-p~~~~~l~~L~~L~Ls~N~l~g~iP~~--~---~~~L~~l~l 152 (771)
+|++ +| .++.+++|+.|+|++|+|++.+ |..|+.+++|+.|+|++|+|++..|.. + +++|+.||+
T Consensus 497 ~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 497 ALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 9995 77 8999999999999999999776 899999999999999999999665532 1 677888764
No 386
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.53 E-value=6.3e-17 Score=160.56 Aligned_cols=147 Identities=18% Similarity=0.250 Sum_probs=129.3
Q ss_pred ccCCCcCCEEEcccCCccccCch------hhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCCcCcccCChhhh
Q 004155 23 IQNWTLLEKLVIQASGLVGPIPS------GIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSCNVSGKLPDYLG 96 (771)
Q Consensus 23 ~~~l~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 96 (771)
+.....++.++|+.|.++|.+|. .|..+++|++|+|++|++++.+ .+.++++|++|+|++|+|+ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l~--~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS--SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCCC--CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcccc--ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45567888889999999888887 9999999999999999999954 8999999999999999999 8999888
Q ss_pred cCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCch--hh--hhcCCeecccCCccccCCCcc--------
Q 004155 97 LMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPP--WM--LQKGDRVDLSYNSFTAGSSET-------- 164 (771)
Q Consensus 97 ~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~--~~--~~~L~~l~ls~N~l~~~~p~~-------- 164 (771)
.+++|+.|+|++|++++ +| .+..+++|+.|+|++|+++ .+|. .+ +++|+.|++++|++++.+|..
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~ 167 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKIT-NWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRI 167 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECC-CHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCC-chhHHHHHhcCCCCCEEEecCCccccccccccchHHHHH
Confidence 89999999999999995 66 6889999999999999999 4443 34 889999999999999887653
Q ss_pred --cccccccceec
Q 004155 165 --SCQYRSVNLFA 175 (771)
Q Consensus 165 --~~~l~~L~~l~ 175 (771)
+..+++|+.|+
T Consensus 168 ~~~~~l~~L~~Ld 180 (198)
T 1ds9_A 168 EVVKRLPNLKKLD 180 (198)
T ss_dssp HHHHHCSSCSEEC
T ss_pred HHHHhCCCcEEEC
Confidence 77888888886
No 387
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.53 E-value=3.7e-14 Score=136.88 Aligned_cols=106 Identities=18% Similarity=0.170 Sum_probs=78.9
Q ss_pred CcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccC
Q 004155 5 LKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRS 84 (771)
Q Consensus 5 L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 84 (771)
.+.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|++++.++..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 467777777777 6776653 6777778888877766677777777778888877777777766777777788888887
Q ss_pred CcCcccCChhhhcCCCCcEEEccCCCCCC
Q 004155 85 CNVSGKLPDYLGLMTSLKVLDVSFNKLNG 113 (771)
Q Consensus 85 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 113 (771)
|+|++..+..|..+++|+.|+|++|.++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 77775445557777777788887777774
No 388
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.52 E-value=4.4e-16 Score=175.13 Aligned_cols=179 Identities=15% Similarity=0.049 Sum_probs=146.2
Q ss_pred CCCCcEEEccCCccccc----CCccccCCCcCCEEEcccCCccccC-----chhhcCCcCCCEEEcCCCCCCCC----CC
Q 004155 2 LVTLKDFRISDNHFTGK----IPNFIQNWTLLEKLVIQASGLVGPI-----PSGIASLSKLTDLRISDLNGTEA----PF 68 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~----ip~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~L~~n~l~~~----~~ 68 (771)
+++|+.|+|++|++++. ++..+..+++|++|+|++|+++..- +..+..+++|+.|+|++|+++.. .+
T Consensus 198 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 277 (461)
T 1z7x_W 198 PCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC 277 (461)
T ss_dssp CCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHH
T ss_pred CCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHH
Confidence 46899999999999953 6778888999999999999998532 23334689999999999998874 34
Q ss_pred CCccCCCCCcEEEccCCcCcccCChhhhcC-----CCCcEEEccCCCCCCC----CCccccCCCCCcEEEcCCCcccccC
Q 004155 69 PPLDKMKKMKTLILRSCNVSGKLPDYLGLM-----TSLKVLDVSFNKLNGA----IPSTFMGLLDVDYIYLTGNLLTGTI 139 (771)
Q Consensus 69 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~g~----ip~~~~~l~~L~~L~Ls~N~l~g~i 139 (771)
..+.++++|++|+|++|.+++..+..+... ++|+.|+|++|.+++. +|..+..+++|++|+|++|++++..
T Consensus 278 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 278 RVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp HHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred HHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccccc
Confidence 557779999999999999986555555443 6999999999999865 5667788899999999999998665
Q ss_pred chhh-------hhcCCeecccCCcccc----CCCcccccccccceeccCCCC
Q 004155 140 PPWM-------LQKGDRVDLSYNSFTA----GSSETSCQYRSVNLFASSSKG 180 (771)
Q Consensus 140 P~~~-------~~~L~~l~ls~N~l~~----~~p~~~~~l~~L~~l~~s~~~ 180 (771)
+..+ .++|+.|+|++|.++. .+|..+..+++|+.|+++.|.
T Consensus 358 ~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~ 409 (461)
T 1z7x_W 358 VRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNC 409 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSS
T ss_pred HHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCC
Confidence 5544 2389999999999996 678888889999999988663
No 389
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.50 E-value=1.1e-13 Score=134.21 Aligned_cols=104 Identities=16% Similarity=0.160 Sum_probs=77.3
Q ss_pred cEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCC
Q 004155 6 KDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSC 85 (771)
Q Consensus 6 ~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 85 (771)
+.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+++++++..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56777777776 7777664 67777777777777666777777777777777777777776666777777777777777
Q ss_pred cCcccCChhhhcCCCCcEEEccCCCCC
Q 004155 86 NVSGKLPDYLGLMTSLKVLDVSFNKLN 112 (771)
Q Consensus 86 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 112 (771)
+|++..+..|..+++|+.|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 777444444777777777777777777
No 390
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.41 E-value=6.5e-13 Score=143.48 Aligned_cols=130 Identities=18% Similarity=0.262 Sum_probs=92.4
Q ss_pred EEEcccC-CccccCchhhcCCcCCCEEEcCC-CCCCCCCCCCccCCCCCcEEEccCCcCcccCChhhhcCCCCcEEEccC
Q 004155 31 KLVIQAS-GLVGPIPSGIASLSKLTDLRISD-LNGTEAPFPPLDKMKKMKTLILRSCNVSGKLPDYLGLMTSLKVLDVSF 108 (771)
Q Consensus 31 ~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 108 (771)
.++++++ +|+ .+|. |..+++|+.|+|++ |+++++++..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4577776 777 5777 77777888888875 777777777788888888888888888877777888888888888888
Q ss_pred CCCCCCCCccccCCCCCcEEEcCCCcccccCc-hhh--hhcCCeecccCCccccCCCc
Q 004155 109 NKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIP-PWM--LQKGDRVDLSYNSFTAGSSE 163 (771)
Q Consensus 109 N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP-~~~--~~~L~~l~ls~N~l~~~~p~ 163 (771)
|+|++..+..|..++ |+.|+|++|.|...-. .++ +.......+..+++++..|.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 888855444555554 8888888888874433 122 22233444555666666555
No 391
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.40 E-value=5.8e-13 Score=142.88 Aligned_cols=173 Identities=20% Similarity=0.160 Sum_probs=123.8
Q ss_pred CCCCcEEEccCCccc--c-----------------cCC-ccccC--------CCcCCEEEcccCCccccCchhhcCCcCC
Q 004155 2 LVTLKDFRISDNHFT--G-----------------KIP-NFIQN--------WTLLEKLVIQASGLVGPIPSGIASLSKL 53 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~--~-----------------~ip-~~~~~--------l~~L~~L~L~~N~l~~~~p~~~~~l~~L 53 (771)
+++|+.|||++|+|+ . .|| ..|.+ +++|+.|+|.+ .++..-+.+|.+|++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 688999999999998 1 233 25667 89999999998 8885556779999999
Q ss_pred CEEEcCCCCCCCCCCCCccCCCCCcEEEccCCcC----c----------------------ccCChhh------------
Q 004155 54 TDLRISDLNGTEAPFPPLDKMKKMKTLILRSCNV----S----------------------GKLPDYL------------ 95 (771)
Q Consensus 54 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l----~----------------------g~~p~~~------------ 95 (771)
+.|+|++|.+..+.+..|.++.++..|.+..+.. . +.++..+
T Consensus 127 ~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 206 (329)
T 3sb4_A 127 KICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINF 206 (329)
T ss_dssp CEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSE
T ss_pred ceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccce
Confidence 9999999988877777777777777666655221 0 0000000
Q ss_pred ----------------hcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh---hhcCC-eecccCC
Q 004155 96 ----------------GLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM---LQKGD-RVDLSYN 155 (771)
Q Consensus 96 ----------------~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~---~~~L~-~l~ls~N 155 (771)
..+++|+.|+|++|+++..-+..|.+|++|+.|+|.+| ++ .|+... +.+|+ .+++.+
T Consensus 207 l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~- 283 (329)
T 3sb4_A 207 LTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA- 283 (329)
T ss_dssp EEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-
T ss_pred EEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-
Confidence 12678888888888888333345888888888888887 66 555543 66777 888877
Q ss_pred ccccCCCcccccccccceeccCC
Q 004155 156 SFTAGSSETSCQYRSVNLFASSS 178 (771)
Q Consensus 156 ~l~~~~p~~~~~l~~L~~l~~s~ 178 (771)
.++.+.+.+|..+.+|+.++++.
T Consensus 284 ~l~~I~~~aF~~c~~L~~l~l~~ 306 (329)
T 3sb4_A 284 SVTAIEFGAFMGCDNLRYVLATG 306 (329)
T ss_dssp TCCEECTTTTTTCTTEEEEEECS
T ss_pred cceEEchhhhhCCccCCEEEeCC
Confidence 77777778888888888887643
No 392
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.35 E-value=1.4e-12 Score=140.84 Aligned_cols=105 Identities=15% Similarity=0.094 Sum_probs=94.2
Q ss_pred cEEEccCC-cccccCCccccCCCcCCEEEccc-CCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEcc
Q 004155 6 KDFRISDN-HFTGKIPNFIQNWTLLEKLVIQA-SGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILR 83 (771)
Q Consensus 6 ~~L~Ls~N-~l~~~ip~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 83 (771)
..++++++ +|+ .+|. |..+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++.++..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35789998 999 7999 99999999999996 99998888899999999999999999999999999999999999999
Q ss_pred CCcCcccCChhhhcCCCCcEEEccCCCCCC
Q 004155 84 SCNVSGKLPDYLGLMTSLKVLDVSFNKLNG 113 (771)
Q Consensus 84 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 113 (771)
+|+|++..+..|..++ |+.|+|++|.|..
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 9999954444555555 9999999999983
No 393
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.32 E-value=5.4e-12 Score=130.54 Aligned_cols=147 Identities=15% Similarity=0.091 Sum_probs=116.1
Q ss_pred HHHHhcCCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCC-CCcEEeEEEEEEeCCEEEE
Q 004155 416 IKAATNNFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQ-HPNLVKLHGCCIEGNQLLL 494 (771)
Q Consensus 416 l~~~~~~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 494 (771)
+......|.....++.|+.+.||++... |+.+++|+...........+.+|+.+++.+. +..+.++++++.+.+..++
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 3445567888888899999999999764 6889999986532222346888999999884 6778899999999999999
Q ss_pred EEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhc----------------------------------
Q 004155 495 IYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEE---------------------------------- 540 (771)
Q Consensus 495 V~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~---------------------------------- 540 (771)
||||++|.+|.+.+. +......++.+++++|+.||+.
T Consensus 88 v~e~i~G~~l~~~~~---------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (263)
T 3tm0_A 88 LMSEADGVLCSEEYE---------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW 158 (263)
T ss_dssp EEECCSSEEHHHHCC---------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred EEEecCCeehhhccC---------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence 999999999987641 1233457889999999999981
Q ss_pred ----------------------CCCceeccCCCCCcEEEcCCCCeEEEeecCcc
Q 004155 541 ----------------------SRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 572 (771)
Q Consensus 541 ----------------------~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~ 572 (771)
.+..++|||++|.||+++++..+.|+||+.+.
T Consensus 159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01468999999999999876666799999875
No 394
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.29 E-value=4.7e-14 Score=153.81 Aligned_cols=166 Identities=12% Similarity=0.079 Sum_probs=123.0
Q ss_pred CCCCcEEEccCCcccccCCccccC-----CCcCCEEEcccCCccccCchhh-cCCcCCCEEEcCCCCCCCCCCCCc----
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQN-----WTLLEKLVIQASGLVGPIPSGI-ASLSKLTDLRISDLNGTEAPFPPL---- 71 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~-----l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~n~l~~~~~~~~---- 71 (771)
+++|+.|+|++|+|+..-...+.. .++|+.|+|++|.|+..-...+ ..+++|+.|+|++|+++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 367999999999998543333333 2789999999999974333333 346789999999999876443333
Q ss_pred -cCCCCCcEEEccCCcCcc----cCChhhhcCCCCcEEEccCCCCCCC----CCccccCCCCCcEEEcCCCcccccCchh
Q 004155 72 -DKMKKMKTLILRSCNVSG----KLPDYLGLMTSLKVLDVSFNKLNGA----IPSTFMGLLDVDYIYLTGNLLTGTIPPW 142 (771)
Q Consensus 72 -~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~----ip~~~~~l~~L~~L~Ls~N~l~g~iP~~ 142 (771)
...++|+.|+|++|.|+. .++..+..+++|++|+|++|.|+.. ++..+..+++|+.|+|++|.|+..-...
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 346889999999999974 2455567889999999999999742 3556777889999999999998432222
Q ss_pred h------hhcCCeecccCCccccCCCccccc
Q 004155 143 M------LQKGDRVDLSYNSFTAGSSETSCQ 167 (771)
Q Consensus 143 ~------~~~L~~l~ls~N~l~~~~p~~~~~ 167 (771)
+ .++|+.|+|++|.|+......++.
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 2 478999999999998655444443
No 395
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.18 E-value=2.7e-12 Score=148.88 Aligned_cols=172 Identities=8% Similarity=0.068 Sum_probs=122.3
Q ss_pred CCcEEEccCCc-ccc-cCCccccCCCcCCEEEcccCCcccc----CchhhcCCcCCCEEEcCCCCCCCCC----CCCccC
Q 004155 4 TLKDFRISDNH-FTG-KIPNFIQNWTLLEKLVIQASGLVGP----IPSGIASLSKLTDLRISDLNGTEAP----FPPLDK 73 (771)
Q Consensus 4 ~L~~L~Ls~N~-l~~-~ip~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~----~~~~~~ 73 (771)
+|++|+|++|. ++. .++..+.++++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++.. +..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 38999998886 321 2233334678999999999988765 4555667889999999999887433 223567
Q ss_pred CCCCcEEEccCCcCcccCChhhhcCCCCcEEEccCCCCC---CCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCC
Q 004155 74 MKKMKTLILRSCNVSGKLPDYLGLMTSLKVLDVSFNKLN---GAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGD 148 (771)
Q Consensus 74 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~---g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~ 148 (771)
+++|+.|+|++|.+. .+|..+..+++|+.|+++++... +..+..+..+++|+.|+++++... .+|..+ +++|+
T Consensus 219 ~~~L~~L~L~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~ 296 (592)
T 3ogk_B 219 CRSLVSVKVGDFEIL-ELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIR 296 (592)
T ss_dssp CTTCCEEECSSCBGG-GGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCC
T ss_pred CCCCcEEeccCccHH-HHHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCc
Confidence 889999999999888 47788888899999998854333 334456677778888888776443 566555 67788
Q ss_pred eecccCCccccCCC-cccccccccceeccC
Q 004155 149 RVDLSYNSFTAGSS-ETSCQYRSVNLFASS 177 (771)
Q Consensus 149 ~l~ls~N~l~~~~p-~~~~~l~~L~~l~~s 177 (771)
.|+|++|.+++... ..+..+++|+.|+++
T Consensus 297 ~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~ 326 (592)
T 3ogk_B 297 KLDLLYALLETEDHCTLIQKCPNLEVLETR 326 (592)
T ss_dssp EEEETTCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred EEecCCCcCCHHHHHHHHHhCcCCCEEecc
Confidence 88888888665433 335667777777765
No 396
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.15 E-value=2.4e-11 Score=125.07 Aligned_cols=136 Identities=16% Similarity=0.120 Sum_probs=100.7
Q ss_pred CCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCc--EEeEEEEEEeCCEEEEEEEec
Q 004155 422 NFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPN--LVKLHGCCIEGNQLLLIYEYM 499 (771)
Q Consensus 422 ~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lV~E~~ 499 (771)
++.+....+.|..+.||++...+|+.+++|+.... ....+.+|+.+++.+.+.+ +.+++++...++..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 34433333455669999998777888999997653 2245778999998885444 566888888878899999999
Q ss_pred cCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcC--------------------------------------
Q 004155 500 ENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEES-------------------------------------- 541 (771)
Q Consensus 500 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~-------------------------------------- 541 (771)
+|.+|. .. .. ....++.++++.|..||+..
T Consensus 98 ~G~~l~--~~-------~~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
T 1nd4_A 98 PGQDLL--SS-------HL---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL 165 (264)
T ss_dssp SSEETT--TS-------CC---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred CCcccC--cC-------cC---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence 998773 21 11 12367788888888888742
Q ss_pred -----------------CCceeccCCCCCcEEEcCCCCeEEEeecCcc
Q 004155 542 -----------------RLKIVHRDIKATNVLLDKDLNPKISDFGLAK 572 (771)
Q Consensus 542 -----------------~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~ 572 (771)
+..++|||++|.||+++++..+.|+|||.+.
T Consensus 166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999887667799999876
No 397
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.08 E-value=2.4e-11 Score=140.81 Aligned_cols=174 Identities=14% Similarity=0.066 Sum_probs=122.4
Q ss_pred CCCCcEEEccCCccccc----CCccccCCCcCCEEEcccCCcc----ccCchhhcCCcCCCEEEcCCCCCCCCCCCCccC
Q 004155 2 LVTLKDFRISDNHFTGK----IPNFIQNWTLLEKLVIQASGLV----GPIPSGIASLSKLTDLRISDLNGTEAPFPPLDK 73 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~----ip~~~~~l~~L~~L~L~~N~l~----~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 73 (771)
+++|++|+|++|.+++. ++..+.++++|+.|+|++|.++ +.++..+.++++|+.|+|++|.+.+.+ ..+.+
T Consensus 163 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~-~~~~~ 241 (592)
T 3ogk_B 163 CRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELV-GFFKA 241 (592)
T ss_dssp CTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGH-HHHHH
T ss_pred CCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHH-HHHhh
Confidence 67899999999998765 4445567889999999999997 345666678899999999998887743 66777
Q ss_pred CCCCcEEEccCCcCc---ccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh---hhcC
Q 004155 74 MKKMKTLILRSCNVS---GKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM---LQKG 147 (771)
Q Consensus 74 l~~L~~L~Ls~N~l~---g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~---~~~L 147 (771)
+++|+.|+++++... +..+..+..+++|+.|+++++... .+|..+..+++|++|+|++|.+++.....+ +++|
T Consensus 242 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L 320 (592)
T 3ogk_B 242 AANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNL 320 (592)
T ss_dssp CTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTC
T ss_pred hhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCC
Confidence 888888888754332 234455667777888887776443 677777777788888888877664443222 6677
Q ss_pred CeecccCCccccCCCcccccccccceeccC
Q 004155 148 DRVDLSYNSFTAGSSETSCQYRSVNLFASS 177 (771)
Q Consensus 148 ~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s 177 (771)
+.|++++|-..+.++.....+++|+.|+++
T Consensus 321 ~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~ 350 (592)
T 3ogk_B 321 EVLETRNVIGDRGLEVLAQYCKQLKRLRIE 350 (592)
T ss_dssp CEEEEEGGGHHHHHHHHHHHCTTCCEEEEE
T ss_pred CEEeccCccCHHHHHHHHHhCCCCCEEEee
Confidence 777777333233334444556777777776
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.06 E-value=5e-12 Score=137.75 Aligned_cols=139 Identities=17% Similarity=0.131 Sum_probs=107.4
Q ss_pred CCCcEEEccCCcccccCCcccc-CCCcCCEEEcccCCccccCchhh-----cCCcCCCEEEcCCCCCCCCC----CCCcc
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQ-NWTLLEKLVIQASGLVGPIPSGI-----ASLSKLTDLRISDLNGTEAP----FPPLD 72 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~-~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~n~l~~~~----~~~~~ 72 (771)
++|+.|+|++|.|+..-...+. .+++|+.|+|++|+|+..-...+ ...++|+.|+|++|.++... ...+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 5899999999999854333343 46789999999999985434444 34688999999999987532 23346
Q ss_pred CCCCCcEEEccCCcCccc----CChhhhcCCCCcEEEccCCCCCCC----CCccccCCCCCcEEEcCCCcccccCch
Q 004155 73 KMKKMKTLILRSCNVSGK----LPDYLGLMTSLKVLDVSFNKLNGA----IPSTFMGLLDVDYIYLTGNLLTGTIPP 141 (771)
Q Consensus 73 ~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----ip~~~~~l~~L~~L~Ls~N~l~g~iP~ 141 (771)
.+++|++|+|++|+|+.. ++..+..+++|+.|+|++|.|+.. ++..+..+++|++|+|++|.|+..-..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~ 257 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQ 257 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHH
Confidence 789999999999999743 355677889999999999999842 444566678999999999999854333
No 399
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.06 E-value=4e-10 Score=120.61 Aligned_cols=168 Identities=14% Similarity=0.085 Sum_probs=135.0
Q ss_pred CCCCcEEEccCCcccccCC-ccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCC----CCCCCCCc-----
Q 004155 2 LVTLKDFRISDNHFTGKIP-NFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNG----TEAPFPPL----- 71 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l----~~~~~~~~----- 71 (771)
+++|+.|+|.+ +++ .|+ ..|.++++|+.|+|++|.+...-+.+|.++.++..|.+..+.. ..+....|
T Consensus 100 ~~~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~ 177 (329)
T 3sb4_A 100 KQTLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEP 177 (329)
T ss_dssp CTTCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCC
T ss_pred cCCCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccc
Confidence 68999999999 898 555 5799999999999999999866677898888888887766211 11111111
Q ss_pred ---------------------------------------------cCCCCCcEEEccCCcCcccCC-hhhhcCCCCcEEE
Q 004155 72 ---------------------------------------------DKMKKMKTLILRSCNVSGKLP-DYLGLMTSLKVLD 105 (771)
Q Consensus 72 ---------------------------------------------~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~ 105 (771)
..+++|+.|+|++|+++ .+| ..|.+|++|+.|+
T Consensus 178 L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~ 256 (329)
T 3sb4_A 178 LETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIK 256 (329)
T ss_dssp CEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCC-EECTTTTTTCTTCCEEE
T ss_pred cceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcc-eecHhhhhCCCCCCEEE
Confidence 02789999999999999 555 5799999999999
Q ss_pred ccCCCCCCCCCccccCCCCCc-EEEcCCCcccccCc-hhh--hhcCCeecccCCccccCCCcccccccccceec
Q 004155 106 VSFNKLNGAIPSTFMGLLDVD-YIYLTGNLLTGTIP-PWM--LQKGDRVDLSYNSFTAGSSETSCQYRSVNLFA 175 (771)
Q Consensus 106 Ls~N~l~g~ip~~~~~l~~L~-~L~Ls~N~l~g~iP-~~~--~~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~ 175 (771)
|.+| ++..-+..|.++.+|+ .|+|.+ +++ .|+ ..| +.+|+.+++++|+++...+.+|.++++|+.+.
T Consensus 257 l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 257 LPHN-LKTIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred CCcc-cceehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 9998 7744456799999999 999998 777 555 445 78899999999999998899999999998875
No 400
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.01 E-value=4.2e-11 Score=138.87 Aligned_cols=62 Identities=16% Similarity=0.285 Sum_probs=26.4
Q ss_pred CCcEEEccCCcccccCCcccc-CCCcCCEEEcccC-Ccccc-CchhhcCCcCCCEEEcCCCCCCC
Q 004155 4 TLKDFRISDNHFTGKIPNFIQ-NWTLLEKLVIQAS-GLVGP-IPSGIASLSKLTDLRISDLNGTE 65 (771)
Q Consensus 4 ~L~~L~Ls~N~l~~~ip~~~~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~n~l~~ 65 (771)
+|+.|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++..+.++++|++|+|++|.+++
T Consensus 106 ~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~ 170 (594)
T 2p1m_B 106 WLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDD 170 (594)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEEC
T ss_pred CCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCC
Confidence 444444444444433333332 3444455555444 23211 22333344445555555444433
No 401
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.98 E-value=3.3e-11 Score=139.74 Aligned_cols=178 Identities=10% Similarity=0.010 Sum_probs=120.1
Q ss_pred CCCCcEEEccCCccccc-CCccccCCCcCCEEEcc---------cCCccccCchhhc-CCcCCCEEEcCCCCCCCCCCCC
Q 004155 2 LVTLKDFRISDNHFTGK-IPNFIQNWTLLEKLVIQ---------ASGLVGPIPSGIA-SLSKLTDLRISDLNGTEAPFPP 70 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~-ip~~~~~l~~L~~L~L~---------~N~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~~~~ 70 (771)
+++|+.|+|++| ++.. ++.-...+++|+.|+|+ .|.+++.....+. .+++|+.|.++.|+++......
T Consensus 313 ~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~ 391 (594)
T 2p1m_B 313 CPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALIT 391 (594)
T ss_dssp CTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHH
T ss_pred CCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHH
Confidence 578999999988 5422 22223357888888883 3555543333333 4788888888888877654444
Q ss_pred cc-CCCCCcEEEcc--C----CcCccc-----CChhhhcCCCCcEEEccCCCCCCCCCccccC-CCCCcEEEcCCCcccc
Q 004155 71 LD-KMKKMKTLILR--S----CNVSGK-----LPDYLGLMTSLKVLDVSFNKLNGAIPSTFMG-LLDVDYIYLTGNLLTG 137 (771)
Q Consensus 71 ~~-~l~~L~~L~Ls--~----N~l~g~-----~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~-l~~L~~L~Ls~N~l~g 137 (771)
+. .+++|+.|+|+ + |+++.. ++..+..+++|+.|+|++ .+++..+..++. +++|+.|+|++|.+++
T Consensus 392 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~ 470 (594)
T 2p1m_B 392 IARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSD 470 (594)
T ss_dssp HHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSH
T ss_pred HHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcH
Confidence 44 57888899888 4 556521 122266788889999876 666555555555 7888999998888876
Q ss_pred cCchhh---hhcCCeecccCCccccCCCc-ccccccccceeccCCCCC
Q 004155 138 TIPPWM---LQKGDRVDLSYNSFTAGSSE-TSCQYRSVNLFASSSKGN 181 (771)
Q Consensus 138 ~iP~~~---~~~L~~l~ls~N~l~~~~p~-~~~~l~~L~~l~~s~~~~ 181 (771)
..+..+ +++|+.|+|++|+++..... ....+++|+.|+++.+..
T Consensus 471 ~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 471 LGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 555444 67888899998888654443 344578888888876644
No 402
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.96 E-value=2.2e-10 Score=121.23 Aligned_cols=183 Identities=17% Similarity=0.201 Sum_probs=123.6
Q ss_pred CCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCC-CCc--EEeEEEEEEeCC---EEEEEEEec
Q 004155 426 DNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQ-HPN--LVKLHGCCIEGN---QLLLIYEYM 499 (771)
Q Consensus 426 ~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lV~E~~ 499 (771)
.+.++.|....||+.. ..+++|+... ......+.+|+.+++.+. +.. +.+++......+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~--~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKH--SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESS--HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCC--cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999874 4588898643 234567889999998873 322 445555443333 348899999
Q ss_pred cCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhc---------------------------------------
Q 004155 500 ENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEE--------------------------------------- 540 (771)
Q Consensus 500 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~--------------------------------------- 540 (771)
+|.+|.+... ..++..++..++.++++.|+.||+.
T Consensus 99 ~G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 99 KGVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CCEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred CCeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 9988765331 3467778888899999999998861
Q ss_pred ----------------CCCceeccCCCCCcEEEcC--CCCeEEEeecCccccCCCCcccccccccCCCc---cchhhhcc
Q 004155 541 ----------------SRLKIVHRDIKATNVLLDK--DLNPKISDFGLAKLDEEDNTHISTRVAGTFGY---MAPEYAMR 599 (771)
Q Consensus 541 ----------------~~~~ivH~Dlkp~NIll~~--~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y---~aPE~~~~ 599 (771)
.++.++|+|++|.||++++ ...+.|+||+.+...+....- .....+ ..|+....
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~ 247 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDF-----ISLMEDDEEYGMEFVSK 247 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHH-----HTTCCTTTSCCHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHH-----HHHHhhccccCHHHHHH
Confidence 1245899999999999988 556889999998754321110 001111 22332210
Q ss_pred -----CCC---------CchHhHHHHHHHHHHHHhCCCCC
Q 004155 600 -----GYL---------TDKADVYSFGIVALEIVSGRSNS 625 (771)
Q Consensus 600 -----~~~---------~~ksDV~S~Gvil~elltG~~p~ 625 (771)
+.. ....+.|++|.++|.+.+|..+|
T Consensus 248 ~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 248 ILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 111 12368999999999999998665
No 403
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.96 E-value=9.7e-10 Score=119.15 Aligned_cols=142 Identities=17% Similarity=0.230 Sum_probs=107.1
Q ss_pred CCccccCCceeEEEEEcCCCcEEEEEEcc--cCC-hhcHHHHHHHHHHHHcCC--CCcEEeEEEEEEeC---CEEEEEEE
Q 004155 426 DNKIGEGGFGPVYKGHMADGTVVAVKQLS--SKS-KQGNREFVNEIGMISALQ--HPNLVKLHGCCIEG---NQLLLIYE 497 (771)
Q Consensus 426 ~~~lG~G~~g~Vy~~~~~~g~~vavK~l~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lV~E 497 (771)
.+.|+.|.++.||+....+ ..+++|+.. ... ......+.+|+.+++.+. +..++++++++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 5678999999999998754 678888775 322 122456788999999886 45688899888766 45899999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcC------------------------------------
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEES------------------------------------ 541 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~------------------------------------ 541 (771)
|++|..+.+.. ...++..++..++.+++++|+.||+..
T Consensus 122 ~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 122 FVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred ecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 99987764321 134778889999999999999999731
Q ss_pred -------------------CCceeccCCCCCcEEEcCCCC--eEEEeecCcccc
Q 004155 542 -------------------RLKIVHRDIKATNVLLDKDLN--PKISDFGLAKLD 574 (771)
Q Consensus 542 -------------------~~~ivH~Dlkp~NIll~~~~~--~kl~DFGla~~~ 574 (771)
+..++|||+++.||+++.++. +.|+||+.+..-
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 257999999999999987753 689999998743
No 404
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.95 E-value=2.5e-09 Score=117.53 Aligned_cols=167 Identities=12% Similarity=0.155 Sum_probs=119.9
Q ss_pred CCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEcc
Q 004155 4 TLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILR 83 (771)
Q Consensus 4 ~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 83 (771)
+|+.+.|.+ .++..-+..|.++++|+.++|++|+++ .+|.....+.+|+.+.|.+ +++.+....|.++++|+.|+|.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCT-TCCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCC-chheehhhHhhCCCCCCEEecC
Confidence 578888876 676333457888899999999988888 4554433468899998884 4777777888888899999988
Q ss_pred CCcCcccCC-hhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCccc----ccCchh-h--hhcCCeecccCC
Q 004155 84 SCNVSGKLP-DYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLT----GTIPPW-M--LQKGDRVDLSYN 155 (771)
Q Consensus 84 ~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~----g~iP~~-~--~~~L~~l~ls~N 155 (771)
+| ++ .++ ..|.+ .+|+.+.| .|.++..-+..|.+|++|+.+.+.+|.+. ..++.. | +.+|+.++|. |
T Consensus 235 ~~-l~-~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~ 309 (401)
T 4fdw_A 235 EN-VS-TIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-E 309 (401)
T ss_dssp TT-CC-EECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-T
T ss_pred CC-cc-Ccccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-C
Confidence 75 55 444 45555 78888888 45566344556888888888888887664 124433 3 6678888888 4
Q ss_pred ccccCCCcccccccccceeccCC
Q 004155 156 SFTAGSSETSCQYRSVNLFASSS 178 (771)
Q Consensus 156 ~l~~~~p~~~~~l~~L~~l~~s~ 178 (771)
.++.+...+|..+.+|+.+.+..
T Consensus 310 ~i~~I~~~aF~~c~~L~~l~lp~ 332 (401)
T 4fdw_A 310 SIRILGQGLLGGNRKVTQLTIPA 332 (401)
T ss_dssp TCCEECTTTTTTCCSCCEEEECT
T ss_pred ceEEEhhhhhcCCCCccEEEECc
Confidence 57767777888888888887743
No 405
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.83 E-value=2.2e-09 Score=116.00 Aligned_cols=174 Identities=12% Similarity=0.146 Sum_probs=121.4
Q ss_pred CCCcEEEccCCcccc-c-------CCccccCCCcCCEEEcccCCcc---------ccCchhhcCCcCCCEEEcCCCCCCC
Q 004155 3 VTLKDFRISDNHFTG-K-------IPNFIQNWTLLEKLVIQASGLV---------GPIPSGIASLSKLTDLRISDLNGTE 65 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~-~-------ip~~~~~l~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~L~~n~l~~ 65 (771)
.+++.|.+....+.| . +...+..+++|+.|.+.++... +.++..+..+++|+.|+|++|....
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~ 186 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS 186 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce
Confidence 457788887666542 2 1233556889999999776431 2466777889999999999874233
Q ss_pred CCCCCccCCCCCcEEEccCCcCcccCChhhh--cCCCCcEEEccC--CCCCCC-----CCccc--cCCCCCcEEEcCCCc
Q 004155 66 APFPPLDKMKKMKTLILRSCNVSGKLPDYLG--LMTSLKVLDVSF--NKLNGA-----IPSTF--MGLLDVDYIYLTGNL 134 (771)
Q Consensus 66 ~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~--~l~~L~~L~Ls~--N~l~g~-----ip~~~--~~l~~L~~L~Ls~N~ 134 (771)
.+ + +. +++|+.|+|..|.+.......++ .+++|+.|+|+. |...|. +...+ ..+++|+.|+|++|.
T Consensus 187 l~-~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 187 IG-K-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp CC-S-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred ec-c-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 32 2 43 89999999999988744334454 789999999864 332222 11122 357899999999999
Q ss_pred ccccCchhh-----hhcCCeecccCCccccC----CCcccccccccceeccCCC
Q 004155 135 LTGTIPPWM-----LQKGDRVDLSYNSFTAG----SSETSCQYRSVNLFASSSK 179 (771)
Q Consensus 135 l~g~iP~~~-----~~~L~~l~ls~N~l~~~----~p~~~~~l~~L~~l~~s~~ 179 (771)
+.+..+..+ +++|+.|+|+.|.++.. ++..+..+++|+.|+++.+
T Consensus 264 i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n 317 (362)
T 2ra8_A 264 EQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYN 317 (362)
T ss_dssp THHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSB
T ss_pred CchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCC
Confidence 985544333 67899999999999874 3444466788999998755
No 406
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.78 E-value=2.5e-08 Score=109.48 Aligned_cols=164 Identities=12% Similarity=0.083 Sum_probs=129.7
Q ss_pred CCcEEEccCCcccccCCc-cccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEc
Q 004155 4 TLKDFRISDNHFTGKIPN-FIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLIL 82 (771)
Q Consensus 4 ~L~~L~Ls~N~l~~~ip~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 82 (771)
+|+.+.|.+| ++ .|+. .|.+ .+|+.+.|.+ .++..-+.+|.+|.+|+.++|++|+++.++...|. +.+|+.+.|
T Consensus 136 ~L~~i~l~~~-i~-~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~l 210 (401)
T 4fdw_A 136 QIAKVVLNEG-LK-SIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLL 210 (401)
T ss_dssp CCSEEECCTT-CC-EECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEEC
T ss_pred CccEEEeCCC-cc-EECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEe
Confidence 6888999877 77 5554 5666 5799999986 77755677899999999999999999998888887 589999999
Q ss_pred cCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCch-hh--hhcCCeecccCCccc-
Q 004155 83 RSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPP-WM--LQKGDRVDLSYNSFT- 158 (771)
Q Consensus 83 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~-~~--~~~L~~l~ls~N~l~- 158 (771)
.+| +...-...|.++++|+.|+|..| ++..-...|.+ .+|+.+.| .|.++ .|+. .| +.+|+.+++.+|.+.
T Consensus 211 p~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~-~I~~~aF~~c~~L~~l~l~~~~~~~ 285 (401)
T 4fdw_A 211 PVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVT-NIASRAFYYCPELAEVTTYGSTFND 285 (401)
T ss_dssp CTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCC-EECTTTTTTCTTCCEEEEESSCCCC
T ss_pred CCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCcc-EEChhHhhCCCCCCEEEeCCccccC
Confidence 855 76344567999999999999876 55233445766 78999999 45566 5554 44 778999999988776
Q ss_pred ----cCCCcccccccccceeccC
Q 004155 159 ----AGSSETSCQYRSVNLFASS 177 (771)
Q Consensus 159 ----~~~p~~~~~l~~L~~l~~s 177 (771)
...+..|..+.+|+.+.+.
T Consensus 286 ~~~~~I~~~aF~~c~~L~~l~l~ 308 (401)
T 4fdw_A 286 DPEAMIHPYCLEGCPKLARFEIP 308 (401)
T ss_dssp CTTCEECTTTTTTCTTCCEECCC
T ss_pred CcccEECHHHhhCCccCCeEEeC
Confidence 4667889999999998876
No 407
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.73 E-value=4.2e-09 Score=113.76 Aligned_cols=157 Identities=13% Similarity=0.205 Sum_probs=108.6
Q ss_pred CCCCcEEEccCCccc---------ccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCcc
Q 004155 2 LVTLKDFRISDNHFT---------GKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLD 72 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~---------~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 72 (771)
|++|+.|.+.++... +.++..+..+++|+.|+|++|.-. .++. + .+++|+.|+|..|.+.......+.
T Consensus 138 l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~ 214 (362)
T 2ra8_A 138 FAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDIL 214 (362)
T ss_dssp HTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHH
T ss_pred cchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHH
Confidence 578999999766432 234455677899999999988411 3444 4 388999999998877543323333
Q ss_pred --CCCCCcEEEccC--CcCccc-----CChhh--hcCCCCcEEEccCCCCCCCCCcccc---CCCCCcEEEcCCCccccc
Q 004155 73 --KMKKMKTLILRS--CNVSGK-----LPDYL--GLMTSLKVLDVSFNKLNGAIPSTFM---GLLDVDYIYLTGNLLTGT 138 (771)
Q Consensus 73 --~l~~L~~L~Ls~--N~l~g~-----~p~~~--~~l~~L~~L~Ls~N~l~g~ip~~~~---~l~~L~~L~Ls~N~l~g~ 138 (771)
.+++|+.|+|+. |...|. +...+ ..+++|+.|+|++|.+.+..+..+. .+++|+.|+|+.|.|++.
T Consensus 215 ~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 215 GSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp HSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred HccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 789999999863 332211 11122 3578999999999998754433332 578999999999999864
Q ss_pred ----Cchhh--hhcCCeecccCCccccCC
Q 004155 139 ----IPPWM--LQKGDRVDLSYNSFTAGS 161 (771)
Q Consensus 139 ----iP~~~--~~~L~~l~ls~N~l~~~~ 161 (771)
++..+ +++|+.|+|++|.++...
T Consensus 295 G~~~L~~~L~~l~~L~~L~L~~n~i~d~~ 323 (362)
T 2ra8_A 295 GARLLLDHVDKIKHLKFINMKYNYLSDEM 323 (362)
T ss_dssp HHHHHHTTHHHHTTCSEEECCSBBCCHHH
T ss_pred HHHHHHhhcccCCcceEEECCCCcCCHHH
Confidence 33332 688999999999887543
No 408
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.67 E-value=1.4e-07 Score=100.45 Aligned_cols=184 Identities=15% Similarity=0.143 Sum_probs=122.1
Q ss_pred CCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCC----CcEEeEEEEEEeCCEEEEEEE
Q 004155 422 NFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQH----PNLVKLHGCCIEGNQLLLIYE 497 (771)
Q Consensus 422 ~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~lV~E 497 (771)
.....+.++.|....||+. |..+++|+... ......+.+|..+++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 4556778999999999998 56788897643 2224568899998888865 234555554 45689999
Q ss_pred eccCCCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcC------------------------------------
Q 004155 498 YMENNSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEES------------------------------------ 541 (771)
Q Consensus 498 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~------------------------------------ 541 (771)
|++|.++.+.. ...++..++..++.++++.|+.||+..
T Consensus 108 ~i~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
T 3r70_A 108 YIKGERITYEQ------YHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLL 181 (320)
T ss_dssp CCCCBCCCHHH------HTTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ecCCccccccc------cccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccc
Confidence 99998876332 124667777888888888888888542
Q ss_pred ------------------------CCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCCcccccccccCCCccchhhh
Q 004155 542 ------------------------RLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYA 597 (771)
Q Consensus 542 ------------------------~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~ 597 (771)
++.++|+|++|.||+++.+..+.|+||+.+........-. ...........||..
T Consensus 182 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~ 260 (320)
T 3r70_A 182 TDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDNDFL-CLLDCSTDDFGKEFG 260 (320)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEECGGGGGH-HHHSCCTTSCCHHHH
T ss_pred cccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCCHHHHHH-HHHHhcccccCHHHH
Confidence 1245999999999999987667999999997543322111 111111122344433
Q ss_pred cc-----CC-----CCchHhHHHHHHHHHHHHhCC
Q 004155 598 MR-----GY-----LTDKADVYSFGIVALEIVSGR 622 (771)
Q Consensus 598 ~~-----~~-----~~~ksDV~S~Gvil~elltG~ 622 (771)
.. .. .....+.|..-..+++++.|.
T Consensus 261 ~~~l~~Y~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 295 (320)
T 3r70_A 261 RKVLKYYQHKAPEVAERKAELNDVYWSIDQIIYGY 295 (320)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHTHHHHHHHSSC
T ss_pred HHHHHHHhccCcHHHHHHHHHHHHHhHHHHHHHHH
Confidence 21 11 124567775555577888774
No 409
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.52 E-value=2.1e-08 Score=103.04 Aligned_cols=104 Identities=13% Similarity=0.033 Sum_probs=72.5
Q ss_pred ccCCCcCCE--EEcccCCccccCch----hhcCCcCCCEEEcCCCCCCCCC--CCCccCCCCCcEEEccCCcCcccCChh
Q 004155 23 IQNWTLLEK--LVIQASGLVGPIPS----GIASLSKLTDLRISDLNGTEAP--FPPLDKMKKMKTLILRSCNVSGKLPDY 94 (771)
Q Consensus 23 ~~~l~~L~~--L~L~~N~l~~~~p~----~~~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~Ls~N~l~g~~p~~ 94 (771)
|...+.|.. ++++.|+.. .++. ...++++|+.|+|++|+++++. +..+..+++|+.|+|++|+|++. ..
T Consensus 137 l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~ 213 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RE 213 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GG
T ss_pred cCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hh
Confidence 444455555 677777544 3333 2246788888888888888743 34566788888888888888854 34
Q ss_pred hhcCC--CCcEEEccCCCCCCCCCc-------cccCCCCCcEEE
Q 004155 95 LGLMT--SLKVLDVSFNKLNGAIPS-------TFMGLLDVDYIY 129 (771)
Q Consensus 95 ~~~l~--~L~~L~Ls~N~l~g~ip~-------~~~~l~~L~~L~ 129 (771)
+..+. +|+.|+|++|.+++.+|+ .+..+++|+.||
T Consensus 214 l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 214 LDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 45555 888888888888877763 366788888876
No 410
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.50 E-value=2.2e-07 Score=97.21 Aligned_cols=142 Identities=20% Similarity=0.224 Sum_probs=93.3
Q ss_pred CCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCC---cEEeEEEEEEeCCEEEEEEEeccC
Q 004155 425 PDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHP---NLVKLHGCCIEGNQLLLIYEYMEN 501 (771)
Q Consensus 425 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lV~E~~~~ 501 (771)
..+.|+.|.++.||++...+|+.++||+...........|..|++.|+.+++. .+++++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 35679999999999998888999999996543333346789999999999764 577887763 36899999999
Q ss_pred CCHH--------HH---hcCCCccCC-----------------CCChHHHH---H-----------------HHHHHHHH
Q 004155 502 NSLA--------RA---LFGPEAHRL-----------------KLDWPTRH---R-----------------ICVGIARG 533 (771)
Q Consensus 502 gsL~--------~~---l~~~~~~~~-----------------~l~~~~~~---~-----------------i~~~ia~a 533 (771)
+++. +. ||....... .-+|.... + ....+-+.
T Consensus 95 ~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l 174 (288)
T 3d1u_A 95 RPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKV 174 (288)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 8642 11 232211100 01333221 0 01111222
Q ss_pred HHHhh----hcCCCceeccCCCCCcEEEcCCCCeEEEeecCcc
Q 004155 534 LAYLH----EESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 572 (771)
Q Consensus 534 L~~LH----~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~ 572 (771)
++.|. ...++.++|+|+.+.||+++.+ .+.|.|| .+.
T Consensus 175 ~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 175 LDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 23332 2235689999999999999884 5889999 664
No 411
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.49 E-value=1.3e-08 Score=104.49 Aligned_cols=118 Identities=17% Similarity=0.188 Sum_probs=83.0
Q ss_pred EEcccCCccccCch-hhcCCcCCCE--EEcCCCCCCCCC---CCCccCCCCCcEEEccCCcCcc--cCChhhhcCCCCcE
Q 004155 32 LVIQASGLVGPIPS-GIASLSKLTD--LRISDLNGTEAP---FPPLDKMKKMKTLILRSCNVSG--KLPDYLGLMTSLKV 103 (771)
Q Consensus 32 L~L~~N~l~~~~p~-~~~~l~~L~~--L~L~~n~l~~~~---~~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~ 103 (771)
|....|..++.++- .|...+.|.. ++++.|+..... .....++++|+.|+|++|+|++ .+|..+..+++|+.
T Consensus 121 l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~ 200 (267)
T 3rw6_A 121 MSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKI 200 (267)
T ss_dssp HHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCE
T ss_pred HHhccchhccccCHHHcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCE
Confidence 33444444444432 2555566665 677777443221 1112468999999999999997 56778889999999
Q ss_pred EEccCCCCCCCCCccccCCC--CCcEEEcCCCcccccCchh-------h--hhcCCeec
Q 004155 104 LDVSFNKLNGAIPSTFMGLL--DVDYIYLTGNLLTGTIPPW-------M--LQKGDRVD 151 (771)
Q Consensus 104 L~Ls~N~l~g~ip~~~~~l~--~L~~L~Ls~N~l~g~iP~~-------~--~~~L~~l~ 151 (771)
|+|++|+|++. ..+..+. +|++|+|++|.+++.+|.. + +++|+.||
T Consensus 201 L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 201 LNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp EECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred EECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 99999999954 3355555 9999999999999888731 1 77787776
No 412
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.47 E-value=5.4e-07 Score=97.47 Aligned_cols=145 Identities=12% Similarity=0.134 Sum_probs=90.7
Q ss_pred CCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCc--EEeEEEEEEeC-CEEEEEEEeccC
Q 004155 425 PDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPN--LVKLHGCCIEG-NQLLLIYEYMEN 501 (771)
Q Consensus 425 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lV~E~~~~ 501 (771)
..+.++.|....+|+... +|..+++|+.... ..+..|+.+++.+.... +.++++++... +..++||||++|
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 356789999999999975 5788999987532 25888999998886433 56777777654 678999999998
Q ss_pred CCHHHH------------------hcCCCccC-CC------------CChHHH---------------------HHHHHH
Q 004155 502 NSLARA------------------LFGPEAHR-LK------------LDWPTR---------------------HRICVG 529 (771)
Q Consensus 502 gsL~~~------------------l~~~~~~~-~~------------l~~~~~---------------------~~i~~~ 529 (771)
.++.+. ||...... .. -+|... ......
T Consensus 119 ~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 198 (362)
T 3ovc_A 119 VTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQA 198 (362)
T ss_dssp EETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHH
Confidence 655311 11110000 00 001111 011111
Q ss_pred HHHHHHHhhhc-CCCceeccCCCCCcEEEcCCCCeEEEeecCccccC
Q 004155 530 IARGLAYLHEE-SRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDE 575 (771)
Q Consensus 530 ia~aL~~LH~~-~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~ 575 (771)
+...++++... ..+.++|+|+++.||+++.+..+.|+||+.+..-+
T Consensus 199 ~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd 245 (362)
T 3ovc_A 199 LDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGD 245 (362)
T ss_dssp HHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEEC
T ss_pred HHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCC
Confidence 22222233211 12468999999999999887778899999987543
No 413
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.43 E-value=8.5e-07 Score=93.59 Aligned_cols=138 Identities=18% Similarity=0.178 Sum_probs=98.3
Q ss_pred CCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCC---cEEeEEEEEE-eCCEEEEEEEeccC
Q 004155 426 DNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHP---NLVKLHGCCI-EGNQLLLIYEYMEN 501 (771)
Q Consensus 426 ~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lV~E~~~~ 501 (771)
.+.++.|....||+. |..+++|+-. .......+.+|+++|+.+.+. .+.+++.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456888999999998 4668888843 233456789999999998642 3566777764 34567899999999
Q ss_pred CCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhc-----------------------------------------
Q 004155 502 NSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEE----------------------------------------- 540 (771)
Q Consensus 502 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~----------------------------------------- 540 (771)
.++.+... ..++..++..++.++++.|+.||+.
T Consensus 98 ~~l~~~~~------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 98 QILGEDGM------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp EECHHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred eECchhhh------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 88776321 1345555666666666666666642
Q ss_pred ----------------CCCceeccCCCCCcEEEcC---CCC-eEEEeecCccccC
Q 004155 541 ----------------SRLKIVHRDIKATNVLLDK---DLN-PKISDFGLAKLDE 575 (771)
Q Consensus 541 ----------------~~~~ivH~Dlkp~NIll~~---~~~-~kl~DFGla~~~~ 575 (771)
.++.++|+|+++.||+++. ++. +.|+||+.+...+
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd 226 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISD 226 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEEC
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCC
Confidence 2235699999999999987 455 4899999887543
No 414
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.40 E-value=1e-06 Score=90.99 Aligned_cols=135 Identities=15% Similarity=0.113 Sum_probs=98.3
Q ss_pred ccccCCce-eEEEEEcC-CCcEEEEEEcccCChhcHHHHHHHHHHHHcCC-CCcEEeEEEEEEeCCEEEEEEEeccCCCH
Q 004155 428 KIGEGGFG-PVYKGHMA-DGTVVAVKQLSSKSKQGNREFVNEIGMISALQ-HPNLVKLHGCCIEGNQLLLIYEYMENNSL 504 (771)
Q Consensus 428 ~lG~G~~g-~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E~~~~gsL 504 (771)
.+..|..| .||+.... ++..+++|+-.. .....+.+|..+|+.+. +--+.++++++.+.+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 45556555 68988654 467789998643 23456888999998874 33477889999999999999999999888
Q ss_pred HHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhc--------------------------------------------
Q 004155 505 ARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEE-------------------------------------------- 540 (771)
Q Consensus 505 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~-------------------------------------------- 540 (771)
.+... ........++.+++..|..||..
T Consensus 108 ~~~~~--------~~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 108 FQVLE--------EYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHH--------HCGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred ccccc--------CCHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 77651 12233445666777777777742
Q ss_pred -----------CCCceeccCCCCCcEEEcCCCCeEEEeecCccc
Q 004155 541 -----------SRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 573 (771)
Q Consensus 541 -----------~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~ 573 (771)
.++.++|+|+++.||+++.++.+-|+||+.+..
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 112379999999999999877777999998863
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.38 E-value=6e-08 Score=94.44 Aligned_cols=116 Identities=16% Similarity=0.076 Sum_probs=88.3
Q ss_pred ccccCCCcCCEEEcccC-Cccc----cCchhhcCCcCCCEEEcCCCCCCCCC----CCCccCCCCCcEEEccCCcCccc-
Q 004155 21 NFIQNWTLLEKLVIQAS-GLVG----PIPSGIASLSKLTDLRISDLNGTEAP----FPPLDKMKKMKTLILRSCNVSGK- 90 (771)
Q Consensus 21 ~~~~~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~Ls~N~l~g~- 90 (771)
..+...++|++|+|++| .|.. .+...+...++|++|+|++|++.... ...+...++|++|+|++|+|...
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 34566788999999998 8863 24566677788999999999886522 22345568899999999999843
Q ss_pred ---CChhhhcCCCCcEEEc--cCCCCCCC----CCccccCCCCCcEEEcCCCccc
Q 004155 91 ---LPDYLGLMTSLKVLDV--SFNKLNGA----IPSTFMGLLDVDYIYLTGNLLT 136 (771)
Q Consensus 91 ---~p~~~~~l~~L~~L~L--s~N~l~g~----ip~~~~~l~~L~~L~Ls~N~l~ 136 (771)
+...+...++|++|+| ++|.|... +...+...++|++|+|++|.+.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4556777889999999 88999843 3345566789999999999986
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.37 E-value=3.5e-08 Score=96.15 Aligned_cols=118 Identities=11% Similarity=0.120 Sum_probs=90.6
Q ss_pred cCchhhcCCcCCCEEEcCCC-CCCCCC----CCCccCCCCCcEEEccCCcCccc----CChhhhcCCCCcEEEccCCCCC
Q 004155 42 PIPSGIASLSKLTDLRISDL-NGTEAP----FPPLDKMKKMKTLILRSCNVSGK----LPDYLGLMTSLKVLDVSFNKLN 112 (771)
Q Consensus 42 ~~p~~~~~l~~L~~L~L~~n-~l~~~~----~~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~ 112 (771)
.+...+...++|+.|+|++| .+.... ...+...++|++|+|++|+|... +...+...++|++|+|++|.|.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 45566778899999999999 876421 23456678999999999999742 3445666789999999999998
Q ss_pred CC----CCccccCCCCCcEEEc--CCCcccccCchhh------hhcCCeecccCCcccc
Q 004155 113 GA----IPSTFMGLLDVDYIYL--TGNLLTGTIPPWM------LQKGDRVDLSYNSFTA 159 (771)
Q Consensus 113 g~----ip~~~~~l~~L~~L~L--s~N~l~g~iP~~~------~~~L~~l~ls~N~l~~ 159 (771)
.. +...+...++|++|+| ++|.|...--..+ .+.|+.|+|++|.+..
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~~ 165 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQGP 165 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCCh
Confidence 43 4556778889999999 8899985432222 3689999999999863
No 417
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.15 E-value=1.1e-06 Score=94.84 Aligned_cols=80 Identities=6% Similarity=0.037 Sum_probs=55.2
Q ss_pred CCcc-ccCCceeEEEEEcC-------CCcEEEEEEcccCC---hhcHHHHHHHHHHHHcCC-C--CcEEeEEEEEEeC--
Q 004155 426 DNKI-GEGGFGPVYKGHMA-------DGTVVAVKQLSSKS---KQGNREFVNEIGMISALQ-H--PNLVKLHGCCIEG-- 489 (771)
Q Consensus 426 ~~~l-G~G~~g~Vy~~~~~-------~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~-- 489 (771)
.+.| +.|....+|+.... +++.+++|+..... ......+.+|+.+++.+. + -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88889999998654 26789999865422 001245678888888774 2 3567788877654
Q ss_pred -CEEEEEEEeccCCCHH
Q 004155 490 -NQLLLIYEYMENNSLA 505 (771)
Q Consensus 490 -~~~~lV~E~~~~gsL~ 505 (771)
+..++||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999986654
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.90 E-value=2.8e-05 Score=82.83 Aligned_cols=141 Identities=17% Similarity=0.239 Sum_probs=80.4
Q ss_pred CccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCC--CCcEEeEEE------EEEeCCEEEEEEEe
Q 004155 427 NKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQ--HPNLVKLHG------CCIEGNQLLLIYEY 498 (771)
Q Consensus 427 ~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~------~~~~~~~~~lV~E~ 498 (771)
+.|+.|..+.||+....+| .+++|+.... ...+..|+.+++.+. .-.+++++. +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566677899999977555 4899988752 233344555555442 112333332 12346778999999
Q ss_pred ccCCCHH--------------HHhcCCCc----c------CCCCChHHH-------------------------------
Q 004155 499 MENNSLA--------------RALFGPEA----H------RLKLDWPTR------------------------------- 523 (771)
Q Consensus 499 ~~~gsL~--------------~~l~~~~~----~------~~~l~~~~~------------------------------- 523 (771)
++|.++. ..+|.... . ...-.|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986432 11121000 0 001123211
Q ss_pred HHHHHHHHHHHHHhhh----------cCCCceeccCCCCCcEEEcCCCCeEEEeecCcc
Q 004155 524 HRICVGIARGLAYLHE----------ESRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 572 (771)
Q Consensus 524 ~~i~~~ia~aL~~LH~----------~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~ 572 (771)
..+..++..++++|++ ..+..++|||+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111224446677763 124589999999999999888899999999875
No 419
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.90 E-value=2.8e-05 Score=85.08 Aligned_cols=75 Identities=13% Similarity=0.119 Sum_probs=49.3
Q ss_pred CCccccCCceeEEEEEcC-CCcEEEEEEcccCCh-------hcHHHHHHHHHHHHcCCC--C-cEEeEEEEEEeCCEEEE
Q 004155 426 DNKIGEGGFGPVYKGHMA-DGTVVAVKQLSSKSK-------QGNREFVNEIGMISALQH--P-NLVKLHGCCIEGNQLLL 494 (771)
Q Consensus 426 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~l~~~~~~~~~~~l 494 (771)
.+.||.|.++.||++... +++.|+||....... .....+..|.++++.+.. + .+.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467999999999999654 468899998653221 123456778888887632 3 34455543 3455689
Q ss_pred EEEeccCC
Q 004155 495 IYEYMENN 502 (771)
Q Consensus 495 V~E~~~~g 502 (771)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 420
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.80 E-value=9.4e-05 Score=77.83 Aligned_cols=139 Identities=16% Similarity=0.156 Sum_probs=92.5
Q ss_pred CCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCC---CCcEEeEEEEEEeCCEEEEEEEeccCC
Q 004155 426 DNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQ---HPNLVKLHGCCIEGNQLLLIYEYMENN 502 (771)
Q Consensus 426 ~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lV~E~~~~g 502 (771)
.+.|+.|....+|+... ++..+++|+.... ....+..|...|+.+. ...++++++++...+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 46789999999999986 4678889986532 3567888999888873 356888998888888899999999987
Q ss_pred CHH--------H---HhcCCCc-cCC-----------------CCChHHHH---HHHH----------------HHHHH-
Q 004155 503 SLA--------R---ALFGPEA-HRL-----------------KLDWPTRH---RICV----------------GIARG- 533 (771)
Q Consensus 503 sL~--------~---~l~~~~~-~~~-----------------~l~~~~~~---~i~~----------------~ia~a- 533 (771)
.+. + .||.... ... .-+|.... ++.. .+...
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 542 1 1222111 000 11444321 1111 11111
Q ss_pred HHHhhh-cCCCceeccCCCCCcEEEcCCCCeEEEeec
Q 004155 534 LAYLHE-ESRLKIVHRDIKATNVLLDKDLNPKISDFG 569 (771)
Q Consensus 534 L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~DFG 569 (771)
...|.. ..++.++|+|+.+.|++++.++ +.|.||.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 123321 2356899999999999999887 8899984
No 421
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.78 E-value=1.8e-05 Score=87.38 Aligned_cols=80 Identities=10% Similarity=0.030 Sum_probs=50.4
Q ss_pred CCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCCcccccccccCCCccchhhhccC---CCCchHhHHHHHHHHHHH
Q 004155 542 RLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRG---YLTDKADVYSFGIVALEI 618 (771)
Q Consensus 542 ~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~ksDV~S~Gvil~el 618 (771)
+..++|||+++.||+++.++ ++|+||+.+..-.....-......-...|.+|+..... ......++......+|+.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 45899999999999998876 99999999875432111000000001246666655321 122346667888888888
Q ss_pred HhCC
Q 004155 619 VSGR 622 (771)
Q Consensus 619 ltG~ 622 (771)
++++
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8753
No 422
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.74 E-value=4.2e-05 Score=79.65 Aligned_cols=78 Identities=21% Similarity=0.236 Sum_probs=56.8
Q ss_pred CCCCCCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCC-C--CcEEeEEEEEEeCCEEEEEEEe
Q 004155 422 NFAPDNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQ-H--PNLVKLHGCCIEGNQLLLIYEY 498 (771)
Q Consensus 422 ~f~~~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~~~lV~E~ 498 (771)
.....+.+|.|..+.||+.+..||+.|.+|+-..........|..|+..|+.+. . --+++++++ .. -++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~--~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD--RTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET--TEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--cC--ceEEEEe
Confidence 344567899999999999999999999999876544333456788999988874 2 234455544 22 3789999
Q ss_pred ccCCC
Q 004155 499 MENNS 503 (771)
Q Consensus 499 ~~~gs 503 (771)
++++.
T Consensus 92 l~~~~ 96 (288)
T 3f7w_A 92 VDERP 96 (288)
T ss_dssp CCCCC
T ss_pred ecccC
Confidence 98764
No 423
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=97.72 E-value=0.00012 Score=70.04 Aligned_cols=76 Identities=21% Similarity=0.300 Sum_probs=58.1
Q ss_pred cccccceEEEEEecCeeccccCCcchhcCCcCcceeeeeeeeeecceeEEEEEEc-CCcceecccC--CCCCCccccccc
Q 004155 270 SHSFGRRIFDVYIQGKLVLKDFNIEDEAGGIGKAIVKQFPVVVINSTIEIRLYWA-GKGTTGVPVR--GVYGPLISAISL 346 (771)
Q Consensus 270 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~--~~~~p~~~~~~~ 346 (771)
+...|+|+|+||+||..++++|||..++|+ ..++.+.|.+.|.++.+.++..|+ ..|...+... ..+.|++.++.+
T Consensus 90 ~~~~~~rvFdV~ing~~~l~~fdi~~~ag~-~~~~~~~~~~~v~~~~l~i~~~~~~~~g~L~I~f~p~~~~~a~inaIEI 168 (174)
T 2jwp_A 90 FAQSQQKVFDVRVNGHTVVKDLDIFDRVGH-STAHDEIIPISIKKGKLSVQGEVSTFTGKLSVEFVKGYYDNPKVCALFI 168 (174)
T ss_dssp CCCSSSSCEEEEETTEEEEEEECHHHHHSS-SSCEEEEEEEEEETTEEEETTEEEECCSEEEEEEECSSSCSSSEEEEEE
T ss_pred cCCCCCeEeEEEECCEEeecCcCHHHhhCC-CeeEEEEEEEEEecCceeeeeeecccCCeEEEEEeccCCCCcEEEEEEE
Confidence 456899999999999999999999999987 678889999999999888887775 4444433321 134566665543
No 424
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.62 E-value=0.00017 Score=78.71 Aligned_cols=167 Identities=12% Similarity=0.018 Sum_probs=85.3
Q ss_pred CCCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCC-------------------
Q 004155 2 LVTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLN------------------- 62 (771)
Q Consensus 2 L~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~------------------- 62 (771)
+++|+.+.|.++-.+ .-...|.++.+|+.+.+..| ++..-...|.++..|+.+.+.++.
T Consensus 161 c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~i~ip 238 (394)
T 4fs7_A 161 CESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNIIIP 238 (394)
T ss_dssp CTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCCEEEEC
T ss_pred cCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCCceEEEC
Confidence 345666666544222 22334555666666666554 332233445555555544443321
Q ss_pred --CCCCCCCCccCCCCCcEEEccCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCc
Q 004155 63 --GTEAPFPPLDKMKKMKTLILRSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIP 140 (771)
Q Consensus 63 --l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP 140 (771)
++.+....|..+.+|+.+.+..+... .-...|..+..|+.+.+..+.+. ...|..+.+|+.+.+.++ ++ .|+
T Consensus 239 ~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~-~I~ 312 (394)
T 4fs7_A 239 DSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VK-FIG 312 (394)
T ss_dssp TTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CC-EEC
T ss_pred CCceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cc-eec
Confidence 11112223444555555555544332 22333444444444444433221 124666777887777655 55 444
Q ss_pred hh-h--hhcCCeecccCCccccCCCcccccccccceeccC
Q 004155 141 PW-M--LQKGDRVDLSYNSFTAGSSETSCQYRSVNLFASS 177 (771)
Q Consensus 141 ~~-~--~~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s 177 (771)
.. + ..+|+.++|.++ ++.+...+|.++.+|+.+.+.
T Consensus 313 ~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp 351 (394)
T 4fs7_A 313 EEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFP 351 (394)
T ss_dssp TTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCC
T ss_pred hhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEEC
Confidence 33 3 467777777643 665566777777777777654
No 425
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.52 E-value=0.00066 Score=73.39 Aligned_cols=126 Identities=15% Similarity=0.112 Sum_probs=63.8
Q ss_pred ccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCCcCcccCChhhhcCCCCc
Q 004155 23 IQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSCNVSGKLPDYLGLMTSLK 102 (771)
Q Consensus 23 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 102 (771)
+....+|+.+.+..+ +...-...|.++.+|+.+.+..+ ++.+....|.++.+|+.+.+..+ +...-...|.++++|+
T Consensus 213 f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~ 289 (379)
T 4h09_A 213 FSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLT 289 (379)
T ss_dssp TTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCC
T ss_pred cccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccc
Confidence 444455555555443 22233445555666666666543 44444455666666666666433 3312223455666666
Q ss_pred EEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchh-h--hhcCCeeccc
Q 004155 103 VLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPW-M--LQKGDRVDLS 153 (771)
Q Consensus 103 ~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~-~--~~~L~~l~ls 153 (771)
.+.+.+|.++..-...|.++.+|+.+.|.++ ++ .|+.. | ..+|+.+.+.
T Consensus 290 ~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 290 KVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp EEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCCC
T ss_pred cccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEEC
Confidence 6666666655222334666666666666543 44 33332 2 3445555543
No 426
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.48 E-value=0.00023 Score=77.65 Aligned_cols=131 Identities=13% Similarity=0.091 Sum_probs=93.8
Q ss_pred CccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCCcCcccCChhhhcCC
Q 004155 20 PNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSCNVSGKLPDYLGLMT 99 (771)
Q Consensus 20 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 99 (771)
...|.+..+|+.+.+.++-.+ .-...|.++.+|+.+.+. +.++.+....|.++.+|+.++|..+ ++..-...|.+|+
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~ 334 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE 334 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC
Confidence 456888899999999876654 556788999999999996 4677777788999999999999865 6623345799999
Q ss_pred CCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCchhh--hhcCCeecccCCcc
Q 004155 100 SLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPWM--LQKGDRVDLSYNSF 157 (771)
Q Consensus 100 ~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~--~~~L~~l~ls~N~l 157 (771)
+|+.+.|..+ ++..-...|.+|++|+.+++.+|.... ..+ ...|+.+.+..|.+
T Consensus 335 ~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 335 QLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred CCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 9999999755 662334579999999999999886541 122 55677777766654
No 427
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.46 E-value=0.0005 Score=74.93 Aligned_cols=164 Identities=11% Similarity=0.030 Sum_probs=104.6
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEc
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLIL 82 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 82 (771)
..|+.+.+.++.. .+.+......+|+.+.+.++- +..-...|..+.+|+.+.+..+ ...+....|..+..|+.+.+
T Consensus 208 ~~L~~i~~~~~~~--~i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~-~~~i~~~~F~~~~~l~~~~~ 283 (394)
T 4fs7_A 208 ILLENMEFPNSLY--YLGDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNN-KLRIGGSLFYNCSGLKKVIY 283 (394)
T ss_dssp TTCCBCCCCTTCC--EECTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCT-TCEECSCTTTTCTTCCEEEE
T ss_pred cccceeecCCCce--EeehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCC-cceeeccccccccccceecc
Confidence 3455555555432 233334445678888776543 3234556777888888888765 33444566777888888877
Q ss_pred cCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCcccccCch-hh--hhcCCeecccCCcccc
Q 004155 83 RSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPP-WM--LQKGDRVDLSYNSFTA 159 (771)
Q Consensus 83 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~-~~--~~~L~~l~ls~N~l~~ 159 (771)
..+.+. ...|..+.+|+.+.+.++ ++..-...|.++.+|+.++|.++ ++ .|+. .| ..+|+.+++..| ++.
T Consensus 284 ~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~~ 356 (394)
T 4fs7_A 284 GSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LRK 356 (394)
T ss_dssp CSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CCE
T ss_pred Cceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-ccE
Confidence 766543 235677788888888655 55233445777888888888644 55 4543 33 567788888766 666
Q ss_pred CCCcccccccccceeccC
Q 004155 160 GSSETSCQYRSVNLFASS 177 (771)
Q Consensus 160 ~~p~~~~~l~~L~~l~~s 177 (771)
+...+|.++.+|+.+.+.
T Consensus 357 I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 357 IGANAFQGCINLKKVELP 374 (394)
T ss_dssp ECTTTBTTCTTCCEEEEE
T ss_pred ehHHHhhCCCCCCEEEEC
Confidence 666778788888777654
No 428
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.44 E-value=0.00066 Score=71.53 Aligned_cols=160 Identities=16% Similarity=0.177 Sum_probs=89.8
Q ss_pred CCCHHHHHHHhcCCCCC-----CccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCc--EEeE
Q 004155 410 SFTLRQIKAATNNFAPD-----NKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPN--LVKL 482 (771)
Q Consensus 410 ~~~~~~l~~~~~~f~~~-----~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l 482 (771)
.++.+++......|... +.|+.|....+|+....+| .+++|+..... ....+..|+.+++.+...+ +.++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 35667777777777652 3466788899999977666 58899876521 1234556777776653211 2333
Q ss_pred EEE------EEeCCEEEEEEEeccCCCHHH--------------HhcCC----CccC-CCC---ChHHHHH---------
Q 004155 483 HGC------CIEGNQLLLIYEYMENNSLAR--------------ALFGP----EAHR-LKL---DWPTRHR--------- 525 (771)
Q Consensus 483 ~~~------~~~~~~~~lV~E~~~~gsL~~--------------~l~~~----~~~~-~~l---~~~~~~~--------- 525 (771)
+.. ....+..+++|+|++|..+.. .+|.. .... ... .|.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 321 223467799999998864310 01110 0000 001 1222110
Q ss_pred ---HHHHHHHHHHHhhhc----CCCceeccCCCCCcEEEcCCCCeEEEeecCcc
Q 004155 526 ---ICVGIARGLAYLHEE----SRLKIVHRDIKATNVLLDKDLNPKISDFGLAK 572 (771)
Q Consensus 526 ---i~~~ia~aL~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~ 572 (771)
+...+...++++++. .+.+++|+|+++.||+++.+..+.|+||+.+.
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244455555532 23579999999999999987666899999875
No 429
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.42 E-value=0.00056 Score=74.53 Aligned_cols=142 Identities=11% Similarity=0.121 Sum_probs=97.9
Q ss_pred CcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCCcCcccCChhhhcCCCCcEEEc
Q 004155 27 TLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSCNVSGKLPDYLGLMTSLKVLDV 106 (771)
Q Consensus 27 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 106 (771)
..+..+.+.+ .++..-..+|.++.+|+.+.+.++ +..+....|.++++|+.+.+. +.+...-...|.++.+|+.++|
T Consensus 242 ~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~-~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~l 318 (394)
T 4gt6_A 242 REDPAFKIPN-GVARIETHAFDSCAYLASVKMPDS-VVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDI 318 (394)
T ss_dssp CCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTT-CCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEEC
T ss_pred cccceEEcCC-cceEcccceeeecccccEEecccc-cceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEe
Confidence 3445555543 344344667899999999999765 445556789999999999996 5566233457889999999999
Q ss_pred cCCCCCCCCCccccCCCCCcEEEcCCCcccccCchh-h--hhcCCeecccCCccccCCCcccccccccceeccC
Q 004155 107 SFNKLNGAIPSTFMGLLDVDYIYLTGNLLTGTIPPW-M--LQKGDRVDLSYNSFTAGSSETSCQYRSVNLFASS 177 (771)
Q Consensus 107 s~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~-~--~~~L~~l~ls~N~l~~~~p~~~~~l~~L~~l~~s 177 (771)
..| ++..-...|.+|.+|+.+.|..+ ++ .|... | ..+|+.+++.+|.... ..+....+|+.+.+.
T Consensus 319 p~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~ 386 (394)
T 4gt6_A 319 PEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVA 386 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC------
T ss_pred CCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeC
Confidence 865 66333557999999999999765 66 56654 4 6789999999886542 345555566655543
No 430
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.41 E-value=2.8e-05 Score=74.05 Aligned_cols=95 Identities=17% Similarity=0.135 Sum_probs=66.8
Q ss_pred cCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCC-CCCCCCCCccCC----CCCcEEEccCCc-CcccC
Q 004155 18 KIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLN-GTEAPFPPLDKM----KKMKTLILRSCN-VSGKL 91 (771)
Q Consensus 18 ~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~g~~ 91 (771)
.+|.....--+|+.|||+++.|+..--..+..+++|+.|+|++|. ++......++.+ ++|++|+|++|. |+..-
T Consensus 52 ~LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~G 131 (176)
T 3e4g_A 52 HLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKG 131 (176)
T ss_dssp GSCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHH
T ss_pred cCCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHH
Confidence 345433223479999999999875434557789999999999985 554333345554 479999999985 76332
Q ss_pred ChhhhcCCCCcEEEccCCC-CC
Q 004155 92 PDYLGLMTSLKVLDVSFNK-LN 112 (771)
Q Consensus 92 p~~~~~l~~L~~L~Ls~N~-l~ 112 (771)
=..+..+++|+.|+|+++. ++
T Consensus 132 l~~L~~~~~L~~L~L~~c~~It 153 (176)
T 3e4g_A 132 IIALHHFRNLKYLFLSDLPGVK 153 (176)
T ss_dssp HHHGGGCTTCCEEEEESCTTCC
T ss_pred HHHHhcCCCCCEEECCCCCCCC
Confidence 3357789999999999875 44
No 431
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.39 E-value=0.0017 Score=68.51 Aligned_cols=160 Identities=13% Similarity=0.096 Sum_probs=90.6
Q ss_pred CCCHHHHHHHhcCCCC-----CCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCC--cEEeE
Q 004155 410 SFTLRQIKAATNNFAP-----DNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHP--NLVKL 482 (771)
Q Consensus 410 ~~~~~~l~~~~~~f~~-----~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~--niv~l 482 (771)
..+.+++..+...|.. ...++ |....||+....+|+.+++|+..... .....+..|..+++.+... .++++
T Consensus 10 ~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~ 87 (328)
T 1zyl_A 10 TLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAP 87 (328)
T ss_dssp CCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCC
T ss_pred CCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecce
Confidence 3455556555544432 23466 88889999987778789999986321 2345666788877776321 23444
Q ss_pred EEE-----EEeCCEEEEEEEeccCCCHH-----H------H---hcC----CC-ccCCCCChHHH----HH---------
Q 004155 483 HGC-----CIEGNQLLLIYEYMENNSLA-----R------A---LFG----PE-AHRLKLDWPTR----HR--------- 525 (771)
Q Consensus 483 ~~~-----~~~~~~~~lV~E~~~~gsL~-----~------~---l~~----~~-~~~~~l~~~~~----~~--------- 525 (771)
+.. ....+..++||||++|..+. . . +|. .. .....+++... ..
T Consensus 88 ~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (328)
T 1zyl_A 88 VAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIP 167 (328)
T ss_dssp CCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSC
T ss_pred eecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCC
Confidence 432 22356778999999875321 1 1 111 00 00111222211 00
Q ss_pred ------HHHHHHHHHHHhhhc----CCCceeccCCCCCcEEEcCCCCeEEEeecCccc
Q 004155 526 ------ICVGIARGLAYLHEE----SRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 573 (771)
Q Consensus 526 ------i~~~ia~aL~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~ 573 (771)
+...+...++.+.+. .+..++|||+++.||+++ + .+.|+||+.+..
T Consensus 168 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 168 SGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 011111222333221 234689999999999999 4 899999998764
No 432
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.39 E-value=3.8e-05 Score=73.16 Aligned_cols=94 Identities=12% Similarity=0.235 Sum_probs=69.6
Q ss_pred CchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEccCCc-CcccCChhhhcC----CCCcEEEccCCC-CCCCCC
Q 004155 43 IPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILRSCN-VSGKLPDYLGLM----TSLKVLDVSFNK-LNGAIP 116 (771)
Q Consensus 43 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l----~~L~~L~Ls~N~-l~g~ip 116 (771)
+|.....--+|+.|||+++.++..-...+.++++|+.|+|++|. |+..-=..++.+ ++|++|+|++|. ++..--
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl 132 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI 132 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH
Confidence 45443333479999999999887655678899999999999996 663322345554 479999999974 774333
Q ss_pred ccccCCCCCcEEEcCCCc-cc
Q 004155 117 STFMGLLDVDYIYLTGNL-LT 136 (771)
Q Consensus 117 ~~~~~l~~L~~L~Ls~N~-l~ 136 (771)
..+..+++|++|+|+++. ++
T Consensus 133 ~~L~~~~~L~~L~L~~c~~It 153 (176)
T 3e4g_A 133 IALHHFRNLKYLFLSDLPGVK 153 (176)
T ss_dssp HHGGGCTTCCEEEEESCTTCC
T ss_pred HHHhcCCCCCEEECCCCCCCC
Confidence 457789999999999985 44
No 433
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.33 E-value=0.00065 Score=73.48 Aligned_cols=129 Identities=12% Similarity=0.109 Sum_probs=100.0
Q ss_pred CCCcEEEccCCcccccCCccccCCCcCCEEEcccCCccccCchhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEc
Q 004155 3 VTLKDFRISDNHFTGKIPNFIQNWTLLEKLVIQASGLVGPIPSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLIL 82 (771)
Q Consensus 3 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 82 (771)
.+|+.+.+..+ ++..-...|.+..+|+.+.+..+ ++..-...|.++.+|+.+.+.. ++..+....|.++.+|+.+.+
T Consensus 217 ~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~-~i~~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 217 KNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYA-KVKTVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECC-CCSEECTTTTTTCTTCCEEEE
T ss_pred cccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccccc-cceeccccccccccccccccc
Confidence 45677777654 44233456788899999999876 6645567889999999999975 477777778999999999999
Q ss_pred cCCcCcccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCccc
Q 004155 83 RSCNVSGKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLT 136 (771)
Q Consensus 83 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~ 136 (771)
.++.++..-...|.++.+|+.+.|..+ ++-.-...|.++++|+.+.+..+ ++
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~ 345 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-IT 345 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CC
T ss_pred cccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cC
Confidence 999998334467999999999999765 66233457999999999988654 44
No 434
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.24 E-value=0.0011 Score=70.37 Aligned_cols=143 Identities=16% Similarity=0.139 Sum_probs=73.8
Q ss_pred CccccCCcee-EEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCC--CcEEeEEEEEEeCCEEEEEEEeccCCC
Q 004155 427 NKIGEGGFGP-VYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQH--PNLVKLHGCCIEGNQLLLIYEYMENNS 503 (771)
Q Consensus 427 ~~lG~G~~g~-Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lV~E~~~~gs 503 (771)
+.|+.|+... +|+....+|..+++|....... ..+..|+.+++.+.. -.+.+++.+..+.+ ++|||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4566665554 6777664467788886543221 233456666665532 23556666543333 78999998767
Q ss_pred HHHHhcCCC---------------------cc-CCCCChHHHH-------H-------------HHHHHHHHHHHhhh--
Q 004155 504 LARALFGPE---------------------AH-RLKLDWPTRH-------R-------------ICVGIARGLAYLHE-- 539 (771)
Q Consensus 504 L~~~l~~~~---------------------~~-~~~l~~~~~~-------~-------------i~~~ia~aL~~LH~-- 539 (771)
+.+++.... .. -..++..... . ....+...++.+.+
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 655442110 00 0111111100 0 00111122222211
Q ss_pred -cCCCceeccCCCCCcEEEcCC----CCeEEEeecCcccc
Q 004155 540 -ESRLKIVHRDIKATNVLLDKD----LNPKISDFGLAKLD 574 (771)
Q Consensus 540 -~~~~~ivH~Dlkp~NIll~~~----~~~kl~DFGla~~~ 574 (771)
..+..++|||+.+.||+++.+ ..+.|+||+.+..-
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 124579999999999999874 67999999998754
No 435
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.17 E-value=0.00064 Score=74.95 Aligned_cols=72 Identities=15% Similarity=0.163 Sum_probs=48.7
Q ss_pred CCccccCCceeEEEEEcCC--------CcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCc-EEeEEEEEEeCCEEEEEE
Q 004155 426 DNKIGEGGFGPVYKGHMAD--------GTVVAVKQLSSKSKQGNREFVNEIGMISALQHPN-LVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 426 ~~~lG~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lV~ 496 (771)
.+.|+.|....||+....+ +..+++|+.... .....+.+|..+++.+...+ .+++++.+. + .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEE
Confidence 3568888899999997653 578999988432 11245567988888774323 356666553 2 3899
Q ss_pred EeccCCC
Q 004155 497 EYMENNS 503 (771)
Q Consensus 497 E~~~~gs 503 (771)
||++|.+
T Consensus 152 e~l~G~~ 158 (429)
T 1nw1_A 152 EYIPSRP 158 (429)
T ss_dssp CCCCEEE
T ss_pred EEeCCcc
Confidence 9998643
No 436
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.13 E-value=0.00068 Score=70.86 Aligned_cols=140 Identities=13% Similarity=0.141 Sum_probs=74.8
Q ss_pred CCccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcE-EeEEEEEEeCCEEEEEEEec-cCCC
Q 004155 426 DNKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNL-VKLHGCCIEGNQLLLIYEYM-ENNS 503 (771)
Q Consensus 426 ~~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~E~~-~~gs 503 (771)
.+.|+.|....+|+. ..+++|+........ ....+|+.+++.+...++ .+++++ +.+.-++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence 678999999999998 458888876432111 123457777766632222 455544 333457899999 5543
Q ss_pred HHH------------------HhcCCCcc-CCCCC-hHHHHHHHH--------------HHHHHHH----Hhhh-cCCCc
Q 004155 504 LAR------------------ALFGPEAH-RLKLD-WPTRHRICV--------------GIARGLA----YLHE-ESRLK 544 (771)
Q Consensus 504 L~~------------------~l~~~~~~-~~~l~-~~~~~~i~~--------------~ia~aL~----~LH~-~~~~~ 544 (771)
+.. .+|..... ....+ +.....+.. .+...+. .+.. ..+..
T Consensus 95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 174 (301)
T 3dxq_A 95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA 174 (301)
T ss_dssp CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence 321 11221100 00011 111111100 0111111 1111 12346
Q ss_pred eeccCCCCCcEEEcCCCCeEEEeecCcccc
Q 004155 545 IVHRDIKATNVLLDKDLNPKISDFGLAKLD 574 (771)
Q Consensus 545 ivH~Dlkp~NIll~~~~~~kl~DFGla~~~ 574 (771)
++|+|+.+.||+ ..++.+.++||..+..-
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred eeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 899999999999 56678899999988643
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.96 E-value=0.0016 Score=70.21 Aligned_cols=142 Identities=20% Similarity=0.210 Sum_probs=83.8
Q ss_pred CCccccCCceeEEEEEcC--------CCcEEEEEEcccCChhcHHHHHHHHHHHHcCC-CCcEEeEEEEEEeCCEEEEEE
Q 004155 426 DNKIGEGGFGPVYKGHMA--------DGTVVAVKQLSSKSKQGNREFVNEIGMISALQ-HPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 426 ~~~lG~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~ 496 (771)
.+.|..|-...+|+.... +++.|++|+.... ......+.+|..+++.+. +.-..++++++.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 356777888999999764 3578999986432 223456678999888774 2223566666543 2999
Q ss_pred EeccCCCHHH-----------------HhcCCCcc-CCCC--ChHHHHHHHHHHHH-------------------HHHHh
Q 004155 497 EYMENNSLAR-----------------ALFGPEAH-RLKL--DWPTRHRICVGIAR-------------------GLAYL 537 (771)
Q Consensus 497 E~~~~gsL~~-----------------~l~~~~~~-~~~l--~~~~~~~i~~~ia~-------------------aL~~L 537 (771)
||++|.+|.. .||..... .... -|.++.++..++.. .++.|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 9999765431 11222110 1112 24455555544322 22333
Q ss_pred hh----c-CCCceeccCCCCCcEEEcCC----CCeEEEeecCcc
Q 004155 538 HE----E-SRLKIVHRDIKATNVLLDKD----LNPKISDFGLAK 572 (771)
Q Consensus 538 H~----~-~~~~ivH~Dlkp~NIll~~~----~~~kl~DFGla~ 572 (771)
.+ . .+..++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 22 1 23478999999999999876 789999999886
No 438
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.90 E-value=0.0038 Score=69.19 Aligned_cols=74 Identities=18% Similarity=0.071 Sum_probs=47.2
Q ss_pred CCccccCCceeEEEEEcCC-CcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcE-EeEEEEEEeCCEEEEEEEeccCCC
Q 004155 426 DNKIGEGGFGPVYKGHMAD-GTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNL-VKLHGCCIEGNQLLLIYEYMENNS 503 (771)
Q Consensus 426 ~~~lG~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~E~~~~gs 503 (771)
.+.|+.|-...+|+....+ +..+++|+........ ....+|..+++.+...++ .++++++. + .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 4578888899999997754 4788899875432111 112578888888864444 56777662 2 25999998744
Q ss_pred H
Q 004155 504 L 504 (771)
Q Consensus 504 L 504 (771)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 3
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.85 E-value=0.0016 Score=58.84 Aligned_cols=37 Identities=19% Similarity=0.324 Sum_probs=20.7
Q ss_pred CCcEEEccCCcCcccCChhhhcCCCCcEEEccCCCCC
Q 004155 76 KMKTLILRSCNVSGKLPDYLGLMTSLKVLDVSFNKLN 112 (771)
Q Consensus 76 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 112 (771)
+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4556666666665222334555666666666666554
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.74 E-value=0.0019 Score=58.35 Aligned_cols=56 Identities=16% Similarity=0.100 Sum_probs=40.5
Q ss_pred EEEccCCcCc-ccCChhhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCCCccc
Q 004155 79 TLILRSCNVS-GKLPDYLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTGNLLT 136 (771)
Q Consensus 79 ~L~Ls~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~ 136 (771)
.++.++++|+ ..+|..+. ++|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 6677777775 35665543 56888888888888444455778888888888888775
No 441
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.71 E-value=0.0042 Score=66.04 Aligned_cols=33 Identities=30% Similarity=0.411 Sum_probs=28.8
Q ss_pred CCceeccCCCCCcEEEcCCCCeEEEeecCcccc
Q 004155 542 RLKIVHRDIKATNVLLDKDLNPKISDFGLAKLD 574 (771)
Q Consensus 542 ~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~ 574 (771)
+..++|+|+.+.||+++.++.+.|+||+.+...
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 457999999999999998888999999887643
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.68 E-value=0.00044 Score=67.06 Aligned_cols=113 Identities=6% Similarity=0.028 Sum_probs=76.2
Q ss_pred cCCCcCCEEEcccC-Cccc----cCchhhcCCcCCCEEEcCCCCCCCCCCCC----ccCCCCCcEEEccCCcCccc----
Q 004155 24 QNWTLLEKLVIQAS-GLVG----PIPSGIASLSKLTDLRISDLNGTEAPFPP----LDKMKKMKTLILRSCNVSGK---- 90 (771)
Q Consensus 24 ~~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~~~~----~~~l~~L~~L~Ls~N~l~g~---- 90 (771)
.+-+.|+.|+|++| +|.. .+-..+..-+.|+.|+|++|++....-.. +..-+.|+.|+|++|+|...
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 44567888888885 7652 24455666678888888888887433223 33457899999999999733
Q ss_pred CChhhhcCCCCcEEEccCCCC---CC----CCCccccCCCCCcEEEcCCCccc
Q 004155 91 LPDYLGLMTSLKVLDVSFNKL---NG----AIPSTFMGLLDVDYIYLTGNLLT 136 (771)
Q Consensus 91 ~p~~~~~l~~L~~L~Ls~N~l---~g----~ip~~~~~l~~L~~L~Ls~N~l~ 136 (771)
+-..+..-+.|+.|+|++|.. .. .+-..+..-+.|+.|+|+.|.+.
T Consensus 118 la~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 223355567799999987643 31 13344556678999999988754
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.62 E-value=0.0021 Score=69.22 Aligned_cols=72 Identities=11% Similarity=0.124 Sum_probs=42.7
Q ss_pred CccccCCceeEEEEEcCC---------CcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCc-EEeEEEEEEeCCEEEEEE
Q 004155 427 NKIGEGGFGPVYKGHMAD---------GTVVAVKQLSSKSKQGNREFVNEIGMISALQHPN-LVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 427 ~~lG~G~~g~Vy~~~~~~---------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lV~ 496 (771)
+.|+.|....+|+....+ +..+++|+....... ......|..+++.+...+ ..++++.. .+ ++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--NG--GRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--CC--cEEE
Confidence 567888889999997654 268899987543221 112356777777764223 34566543 22 6899
Q ss_pred EeccCCC
Q 004155 497 EYMENNS 503 (771)
Q Consensus 497 E~~~~gs 503 (771)
||++|.+
T Consensus 114 e~i~G~~ 120 (369)
T 3c5i_A 114 EWLYGDP 120 (369)
T ss_dssp ECCCSEE
T ss_pred EEecCCc
Confidence 9998754
No 444
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.62 E-value=0.00048 Score=66.78 Aligned_cols=116 Identities=16% Similarity=0.154 Sum_probs=78.7
Q ss_pred CchhhcCCcCCCEEEcCCC-CCCCC----CCCCccCCCCCcEEEccCCcCccc----CChhhhcCCCCcEEEccCCCCCC
Q 004155 43 IPSGIASLSKLTDLRISDL-NGTEA----PFPPLDKMKKMKTLILRSCNVSGK----LPDYLGLMTSLKVLDVSFNKLNG 113 (771)
Q Consensus 43 ~p~~~~~l~~L~~L~L~~n-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g 113 (771)
+-..+.+-+.|+.|+|++| ++... .-..+..-+.|+.|+|++|+|... +...+..-+.|+.|+|++|.|..
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 3344555678999999986 66431 112355568899999999999733 23345567889999999999983
Q ss_pred C----CCccccCCCCCcEEEcCCCc---ccccC----chhh--hhcCCeecccCCccc
Q 004155 114 A----IPSTFMGLLDVDYIYLTGNL---LTGTI----PPWM--LQKGDRVDLSYNSFT 158 (771)
Q Consensus 114 ~----ip~~~~~l~~L~~L~Ls~N~---l~g~i----P~~~--~~~L~~l~ls~N~l~ 158 (771)
. +-..+..-+.|+.|+|++|. +.... -..+ -+.|..|+++.|.+.
T Consensus 113 ~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 113 ELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 3 23345566789999998763 33221 1222 457889999988754
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.40 E-value=0.007 Score=65.60 Aligned_cols=142 Identities=17% Similarity=0.179 Sum_probs=82.6
Q ss_pred CccccCCceeEEEEEcCC--------CcEEEEEEcccCChh-----------cH-------HHHHHHHHHHHcCC-CCcE
Q 004155 427 NKIGEGGFGPVYKGHMAD--------GTVVAVKQLSSKSKQ-----------GN-------REFVNEIGMISALQ-HPNL 479 (771)
Q Consensus 427 ~~lG~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~-----------~~-------~~~~~E~~~l~~l~-h~ni 479 (771)
+.|..|-...+|+...++ ++.|.+++....... .+ .....|..+++.+. +--.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 567778889999987654 367888887543211 01 12235888888774 3335
Q ss_pred EeEEEEEEeCCEEEEEEEeccCCCHHH-----------------HhcCCCcc-CCCCC--hHHHHHHHHHHH--------
Q 004155 480 VKLHGCCIEGNQLLLIYEYMENNSLAR-----------------ALFGPEAH-RLKLD--WPTRHRICVGIA-------- 531 (771)
Q Consensus 480 v~l~~~~~~~~~~~lV~E~~~~gsL~~-----------------~l~~~~~~-~~~l~--~~~~~~i~~~ia-------- 531 (771)
.++++++.. .+|+||++|-+|.. -+|..... ..... |..+.++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 567776542 28999998754421 11222110 11122 234444443321
Q ss_pred --------------HHHH----Hhhhc-CCCceeccCCCCCcEEEcCC------CCeEEEeecCcc
Q 004155 532 --------------RGLA----YLHEE-SRLKIVHRDIKATNVLLDKD------LNPKISDFGLAK 572 (771)
Q Consensus 532 --------------~aL~----~LH~~-~~~~ivH~Dlkp~NIll~~~------~~~kl~DFGla~ 572 (771)
.-+. +|... .+..++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 22221 23478999999999999877 789999998875
No 446
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.28 E-value=0.017 Score=56.32 Aligned_cols=103 Identities=15% Similarity=0.094 Sum_probs=66.7
Q ss_pred CCHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCCcEEEcCCCCeEEEeecCccccCCCCccc
Q 004155 502 NSLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHI 581 (771)
Q Consensus 502 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~~~~~~~~~ 581 (771)
-||.+.|.. .+.+++++++|.++.|.+.+|.-+-.... + ..+=+.|..|++..+|.+.+.+ +.+.
T Consensus 33 vSL~eIL~~---~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRL---YNQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHH---cCCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc---------
Confidence 378999843 34689999999999999999877621100 1 1233457999999999988764 1111
Q ss_pred ccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCC
Q 004155 582 STRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSN 624 (771)
Q Consensus 582 ~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p 624 (771)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0122567888763 4557899999999999999864433
No 447
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.78 E-value=0.026 Score=61.68 Aligned_cols=142 Identities=12% Similarity=0.107 Sum_probs=83.6
Q ss_pred CCccccCCceeEEEEEcCC--------CcEEEEEEcccCChhcHHHHHHHHHHHHcCC-CCcEEeEEEEEEeCCEEEEEE
Q 004155 426 DNKIGEGGFGPVYKGHMAD--------GTVVAVKQLSSKSKQGNREFVNEIGMISALQ-HPNLVKLHGCCIEGNQLLLIY 496 (771)
Q Consensus 426 ~~~lG~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~ 496 (771)
.+.+..|-...+|+....+ +..|++|+....... .....+|..+++.+. +.-..++++.+ .+ ++||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~--~~--~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADF--PE--GRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEc--CC--CEEE
Confidence 3567778889999997653 578999986543211 112356777777764 22234555533 22 7899
Q ss_pred EeccCCCHHH--------------H---hcCCCc---------cCCCCChHHHHHHHHHH-------------------H
Q 004155 497 EYMENNSLAR--------------A---LFGPEA---------HRLKLDWPTRHRICVGI-------------------A 531 (771)
Q Consensus 497 E~~~~gsL~~--------------~---l~~~~~---------~~~~l~~~~~~~i~~~i-------------------a 531 (771)
||++|.+|.. . +|.... ...+.-|.++.++..++ .
T Consensus 150 efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 229 (424)
T 3mes_A 150 EFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKIL 229 (424)
T ss_dssp ECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHH
T ss_pred EEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHH
Confidence 9999865321 0 111111 11122244444443322 1
Q ss_pred HHHHHhhh---------------------cCCCceeccCCCCCcEEEcCCCCeEEEeecCccc
Q 004155 532 RGLAYLHE---------------------ESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKL 573 (771)
Q Consensus 532 ~aL~~LH~---------------------~~~~~ivH~Dlkp~NIll~~~~~~kl~DFGla~~ 573 (771)
..+.+|.+ ..+..++|+|+.+.||+ +.++.+.++||..|..
T Consensus 230 ~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 230 EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 22333321 12346899999999999 8888999999998863
No 448
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.32 E-value=0.47 Score=51.28 Aligned_cols=30 Identities=23% Similarity=0.393 Sum_probs=25.2
Q ss_pred ceeccCCCCCcEEE------cCCCCeEEEeecCccc
Q 004155 544 KIVHRDIKATNVLL------DKDLNPKISDFGLAKL 573 (771)
Q Consensus 544 ~ivH~Dlkp~NIll------~~~~~~kl~DFGla~~ 573 (771)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 4567799999998863
No 449
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=87.76 E-value=0.31 Score=33.13 Aligned_cols=18 Identities=11% Similarity=0.353 Sum_probs=12.1
Q ss_pred CccccceeehhHHHHHHH
Q 004155 360 SSISAGTVVGIVAATTFV 377 (771)
Q Consensus 360 ~~~~~~~iv~i~~~~~~~ 377 (771)
+..+.+.++|++++.++.
T Consensus 6 ~~ls~GaIAGiVvG~v~g 23 (38)
T 2k1k_A 6 RGLTGGEIVAVIFGLLLG 23 (38)
T ss_dssp TTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCceeeeehHHHHH
Confidence 445677788887776544
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=87.24 E-value=1.6 Score=42.38 Aligned_cols=115 Identities=9% Similarity=0.125 Sum_probs=80.0
Q ss_pred CCCcEEeEEEEEEeCCEEEEEEEeccCC-CHHHHhcCCCccCCCCChHHHHHHHHHHHHHHHHhhhcCCCceeccCCCCC
Q 004155 475 QHPNLVKLHGCCIEGNQLLLIYEYMENN-SLARALFGPEAHRLKLDWPTRHRICVGIARGLAYLHEESRLKIVHRDIKAT 553 (771)
Q Consensus 475 ~h~niv~l~~~~~~~~~~~lV~E~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~Dlkp~ 553 (771)
.||++++. .+-.+.+.+.+.|+.-+.+ ++.. + ..++...+++++.+|+....+++.. +|--|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i-------k~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I-------KSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G-------GGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H-------HhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecc
Confidence 68888866 4566667777766654322 2222 2 3578899999999999988777644 68889999
Q ss_pred cEEEcCCCCeEEEeecCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCCC
Q 004155 554 NVLLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNSS 626 (771)
Q Consensus 554 NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~~ 626 (771)
||+++.++.+++.-.|+...+ +|. ..++..=.-.+=+++..+++++..|+
T Consensus 109 NL~f~~~~~p~i~~RGik~~l------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVV------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp GEEECTTSCEEESCCEETTTB------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred eEEEcCCCCEEEEEccCccCC------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999877764322 121 11233334467788899999987774
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=84.72 E-value=1.9 Score=41.98 Aligned_cols=113 Identities=12% Similarity=0.199 Sum_probs=78.2
Q ss_pred CCCcEEeEEEEEEeCCEEEEEEEeccCC-CHHHHhcCCCccCCCCChHHHHHHHHHHHHHHH-HhhhcCCCceeccCCCC
Q 004155 475 QHPNLVKLHGCCIEGNQLLLIYEYMENN-SLARALFGPEAHRLKLDWPTRHRICVGIARGLA-YLHEESRLKIVHRDIKA 552 (771)
Q Consensus 475 ~h~niv~l~~~~~~~~~~~lV~E~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~aL~-~LH~~~~~~ivH~Dlkp 552 (771)
.||++ -...-.+++.+.+.|+.-+++ +.. .+ ..++...+++++.+|+.... +++. -+|--|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i-------~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AI-------RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HH-------HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HH-------HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 57887 334446778888888865443 333 33 35788999999999999888 6664 36778999
Q ss_pred CcEEEcCCCCeEEEeecCccccCCCCcccccccccCCCccchhhhccCCCCchHhHHHHHHHHHHHHhCCCCC
Q 004155 553 TNVLLDKDLNPKISDFGLAKLDEEDNTHISTRVAGTFGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGRSNS 625 (771)
Q Consensus 553 ~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDV~S~Gvil~elltG~~p~ 625 (771)
+||++|.++.+++.-.|+-.. ++|.- .++..=.-.+=+++..++.++..|
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~------------------lpP~e-----~~ee~fl~qyKali~all~~K~~F 162 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKES------------------LPPDE-----WDDERLLREVKATVLALTEGEYRF 162 (219)
T ss_dssp GGEEECTTCCEEESCCEETTT------------------BSSCS-----CCHHHHHHHHHHHHHHHTTCSSCH
T ss_pred ceEEEeCCCcEEEEEcCCccc------------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCH
Confidence 999999999999987776432 22221 122222345667888888887665
No 452
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=78.06 E-value=1.6 Score=30.63 Aligned_cols=9 Identities=11% Similarity=-0.108 Sum_probs=3.8
Q ss_pred Hhhhhcccc
Q 004155 383 GILWWKGCF 391 (771)
Q Consensus 383 ~~~~~~~~~ 391 (771)
.+++||+++
T Consensus 31 ~~~~~RRr~ 39 (44)
T 2ks1_B 31 IGLFMRRRH 39 (44)
T ss_dssp HHHHHHTTT
T ss_pred HHHHhhhhH
Confidence 344444433
No 453
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=76.68 E-value=1.3 Score=30.89 Aligned_cols=24 Identities=21% Similarity=0.270 Sum_probs=9.4
Q ss_pred eehhHHHHHHHHHH-HHHhhhhccc
Q 004155 367 VVGIVAATTFVIIL-LVGILWWKGC 390 (771)
Q Consensus 367 iv~i~~~~~~~~~~-~~~~~~~~~~ 390 (771)
++++++++++++++ +++++++|++
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR 38 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRR 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhheehh
Confidence 44444443333333 3333444433
No 454
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=74.94 E-value=0.42 Score=52.76 Aligned_cols=62 Identities=13% Similarity=0.155 Sum_probs=19.1
Q ss_pred CCCCccccCCceeEEEEEcCC-CcEEEE------EEcccC--ChhcHHHHHHHHHHHHcCCCCcEEeEEEEEEe
Q 004155 424 APDNKIGEGGFGPVYKGHMAD-GTVVAV------KQLSSK--SKQGNREFVNEIGMISALQHPNLVKLHGCCIE 488 (771)
Q Consensus 424 ~~~~~lG~G~~g~Vy~~~~~~-g~~vav------K~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 488 (771)
...+.|| ||.||+|.+.. ..+||| |..+.. ..+....|.+|..+++.++|||+++.+++...
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 3456777 99999997753 367888 766542 22334568889999999999999999887653
No 455
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=74.50 E-value=1.8 Score=30.33 Aligned_cols=9 Identities=0% Similarity=-0.241 Sum_probs=3.9
Q ss_pred Hhhhhcccc
Q 004155 383 GILWWKGCF 391 (771)
Q Consensus 383 ~~~~~~~~~ 391 (771)
.+++||+++
T Consensus 30 ~~~~~RRRr 38 (44)
T 2l2t_A 30 FAVYVRRKS 38 (44)
T ss_dssp HHHHHHTTC
T ss_pred HHHHhhhhh
Confidence 344444443
No 456
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=65.56 E-value=5.3 Score=27.42 Aligned_cols=9 Identities=11% Similarity=0.379 Sum_probs=3.3
Q ss_pred eehhHHHHH
Q 004155 367 VVGIVAATT 375 (771)
Q Consensus 367 iv~i~~~~~ 375 (771)
+++++++++
T Consensus 16 ~~~vv~Gv~ 24 (41)
T 2k9y_A 16 IGGVAVGVV 24 (41)
T ss_dssp HHHHHHHHH
T ss_pred EeehhHHHH
Confidence 333333333
No 457
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=50.15 E-value=6.1 Score=26.72 Aligned_cols=23 Identities=9% Similarity=0.323 Sum_probs=15.4
Q ss_pred CCccccceeehhHHHHHHHHHHH
Q 004155 359 SSSISAGTVVGIVAATTFVIILL 381 (771)
Q Consensus 359 ~~~~~~~~iv~i~~~~~~~~~~~ 381 (771)
+.....++++|.++++++++.++
T Consensus 9 s~GaIAGiVvG~v~gv~li~~l~ 31 (38)
T 2k1k_A 9 TGGEIVAVIFGLLLGAALLLGIL 31 (38)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceeeeehHHHHHHHHHHHHH
Confidence 44556788888888777665443
No 458
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=48.86 E-value=11 Score=27.63 Aligned_cols=22 Identities=18% Similarity=0.158 Sum_probs=10.0
Q ss_pred cceeehhHHHHHHHHHHHHHhh
Q 004155 364 AGTVVGIVAATTFVIILLVGIL 385 (771)
Q Consensus 364 ~~~iv~i~~~~~~~~~~~~~~~ 385 (771)
+++++..+++..++++++++++
T Consensus 9 ~WiIi~svl~GLLLL~Lii~~L 30 (54)
T 2l8s_A 9 LWVILLSAFAGLLLLMLLILAL 30 (54)
T ss_dssp THHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 4555544444444444444433
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=41.75 E-value=53 Score=27.27 Aligned_cols=39 Identities=15% Similarity=0.062 Sum_probs=19.1
Q ss_pred chhhcCCcCCCEEEcCCCCCCCCCCCCccCCCCCcEEEcc
Q 004155 44 PSGIASLSKLTDLRISDLNGTEAPFPPLDKMKKMKTLILR 83 (771)
Q Consensus 44 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 83 (771)
..+|.++.+|+.+.|-. .++.+...+|.++.+|+.+.+.
T Consensus 13 ~~aF~~c~~L~~i~iP~-~v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQP-NIGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp SCTTTTCTTCCCEEECT-TSSCCCTTSSTTCTTCCCEEEC
T ss_pred HHHhcCCCCCcEEEcCC-chheEcHHHHhccCCccEEEEc
Confidence 34455555555555543 2344444445555555555543
No 460
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=40.58 E-value=14 Score=27.01 Aligned_cols=23 Identities=17% Similarity=0.055 Sum_probs=10.6
Q ss_pred ccceeehhHHHHHHHHHHHHHhh
Q 004155 363 SAGTVVGIVAATTFVIILLVGIL 385 (771)
Q Consensus 363 ~~~~iv~i~~~~~~~~~~~~~~~ 385 (771)
.+++++..+++..++++++++++
T Consensus 11 p~wiIi~svl~GLllL~li~~~L 33 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLLTILVLAM 33 (54)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHH
Confidence 45555554444444444444433
No 461
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=39.66 E-value=17 Score=23.71 Aligned_cols=26 Identities=23% Similarity=0.497 Sum_probs=14.6
Q ss_pred ccceeehhHHHHHHHHHH-HHHhhhhc
Q 004155 363 SAGTVVGIVAATTFVIIL-LVGILWWK 388 (771)
Q Consensus 363 ~~~~iv~i~~~~~~~~~~-~~~~~~~~ 388 (771)
+.++++||+++-++..++ .+.+++|.
T Consensus 5 ~~gaIaGIVvgdi~~t~~i~~~vy~~~ 31 (33)
T 2l34_A 5 SPGVLAGIVVGDLVLTVLIALAVYFLG 31 (33)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcceEEeEeHHHHHHHHHHHHHHhhee
Confidence 456777887776555433 33344443
No 462
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=39.52 E-value=34 Score=23.89 Aligned_cols=19 Identities=16% Similarity=-0.024 Sum_probs=11.5
Q ss_pred HHHHHHhhhhcccccCCcc
Q 004155 378 IILLVGILWWKGCFRPEHT 396 (771)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~ 396 (771)
+++++++.+|...+|+...
T Consensus 23 ~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 23 LLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp HHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHhhhhHhh
Confidence 3345557777777666543
No 463
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=39.32 E-value=27 Score=24.15 Aligned_cols=24 Identities=21% Similarity=0.249 Sum_probs=10.8
Q ss_pred ccceeehhHHHHHHHHHHHHHhhh
Q 004155 363 SAGTVVGIVAATTFVIILLVGILW 386 (771)
Q Consensus 363 ~~~~iv~i~~~~~~~~~~~~~~~~ 386 (771)
..++++..+++..+++++++.++|
T Consensus 9 p~wiIi~s~l~GLllL~li~~~Lw 32 (42)
T 2k1a_A 9 PIWWVLVGVLGGLLLLTILVLAMW 32 (42)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 345554444444444444444443
No 464
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=36.59 E-value=1e+02 Score=31.81 Aligned_cols=137 Identities=15% Similarity=0.168 Sum_probs=72.2
Q ss_pred CccccCCceeEEEEEcCCCcEEEEEEcccCChhcHHHHHHHHHHHHcCCCCcEEeEEEE-------------EE------
Q 004155 427 NKIGEGGFGPVYKGHMADGTVVAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLHGC-------------CI------ 487 (771)
Q Consensus 427 ~~lG~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~-------------~~------ 487 (771)
+..-.| .+.||.+.. ++..|+||-. .....+.+-.++...-.+.-|+..-+.-. +.
T Consensus 75 ~~s~~G-stgvff~~t-d~~~~VVK~s---~~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~l 149 (342)
T 1cja_A 75 ERSEKG-TEGLFFVET-ESGVFIVKRS---TNIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRVI 149 (342)
T ss_dssp EECCST-TSCEEEEEE-SSCEEEEECC---TTHHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCHH
T ss_pred EeccCC-CCCeEEEEe-CCCEEEEeCc---HHHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHHH
Confidence 344445 456666654 5788999944 22334455556665556666663322211 00
Q ss_pred ---eCCEEEEEEEeccCCCHHHHhcCCCccCCCCChHHHHHHHHHHH--HHHHHhhh-cCCCceec-cCCCCCcEEEcCC
Q 004155 488 ---EGNQLLLIYEYMENNSLARALFGPEAHRLKLDWPTRHRICVGIA--RGLAYLHE-ESRLKIVH-RDIKATNVLLDKD 560 (771)
Q Consensus 488 ---~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia--~aL~~LH~-~~~~~ivH-~Dlkp~NIll~~~ 560 (771)
.....+++|||.+|..|.+.-+.... ..+. .+.+.++. -++..+.. ..+.+.+. .--.++|||++.+
T Consensus 150 ~~l~~~~~~l~meyv~G~~L~e~~~~~~~--~~f~----~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~ 223 (342)
T 1cja_A 150 TTLANQANILLMELVRGITLNKLTTTSAP--EVLT----KSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSER 223 (342)
T ss_dssp HHHTTCSEEEEEECCCEEESTTCCSSSHH--HHSC----HHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESB
T ss_pred HHhhcccceehhhhcCCCccccchhhhhh--hhcC----HHHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCC
Confidence 11246799999987554332110000 0111 12333332 24444444 34444333 2257899999765
Q ss_pred C-CeEEEeecCcccc
Q 004155 561 L-NPKISDFGLAKLD 574 (771)
Q Consensus 561 ~-~~kl~DFGla~~~ 574 (771)
. .+.++|-+.+...
T Consensus 224 n~~~~~IDhn~af~~ 238 (342)
T 1cja_A 224 GATVVPIDSKIIPLD 238 (342)
T ss_dssp TTCEEECSCCCCCCC
T ss_pred CCeEEEEcCCccccC
Confidence 4 4899999998643
No 465
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=35.75 E-value=7.5 Score=25.67 Aligned_cols=6 Identities=17% Similarity=-0.108 Sum_probs=2.4
Q ss_pred hhhhcc
Q 004155 384 ILWWKG 389 (771)
Q Consensus 384 ~~~~~~ 389 (771)
.+++|+
T Consensus 28 ~~~iRR 33 (35)
T 1iij_A 28 GILIKR 33 (35)
T ss_dssp THHHHH
T ss_pred heEEee
Confidence 344443
No 466
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=35.00 E-value=21 Score=24.95 Aligned_cols=23 Identities=22% Similarity=0.277 Sum_probs=9.2
Q ss_pred ceeehhHHHHHHHHHHHHHhhhh
Q 004155 365 GTVVGIVAATTFVIILLVGILWW 387 (771)
Q Consensus 365 ~~iv~i~~~~~~~~~~~~~~~~~ 387 (771)
+.++|+++.+++.+++++.+-..
T Consensus 16 ~~vVGvll~vi~~l~~~~~~RRR 38 (44)
T 2jwa_A 16 SAVVGILLVVVLGVVFGILIKRR 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhheehh
Confidence 33444443333334444444333
No 467
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=33.95 E-value=27 Score=24.34 Aligned_cols=19 Identities=21% Similarity=0.286 Sum_probs=11.5
Q ss_pred HHHHHHhhhhcccccCCcc
Q 004155 378 IILLVGILWWKGCFRPEHT 396 (771)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~ 396 (771)
++++++..+|...+|+...
T Consensus 22 ~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 22 ILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHHHHHhhhhhhh
Confidence 3345557777777666544
No 468
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=27.74 E-value=70 Score=26.52 Aligned_cols=38 Identities=21% Similarity=0.266 Sum_probs=17.6
Q ss_pred hhhcCCCCcEEEccCCCCCCCCCccccCCCCCcEEEcCC
Q 004155 94 YLGLMTSLKVLDVSFNKLNGAIPSTFMGLLDVDYIYLTG 132 (771)
Q Consensus 94 ~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~ 132 (771)
.|.++++|+.+.|-.+ ++..-...|.+|.+|+.+.+..
T Consensus 15 aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 15 LFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp TTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred HhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 3444555555555433 2212233455555555555543
No 469
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=20.01 E-value=64 Score=24.75 Aligned_cols=11 Identities=18% Similarity=0.383 Sum_probs=5.0
Q ss_pred HHHHHhhhhcc
Q 004155 379 ILLVGILWWKG 389 (771)
Q Consensus 379 ~~~~~~~~~~~ 389 (771)
++++.+||+.+
T Consensus 29 ~li~gcwcylr 39 (90)
T 1zza_A 29 ALILGCWCYLR 39 (90)
T ss_dssp HHHHHHHTTTS
T ss_pred HHHHHHHHHHH
Confidence 34444454443
Done!