Query 004157
Match_columns 771
No_of_seqs 451 out of 2628
Neff 7.5
Searched_HMMs 46136
Date Thu Mar 28 18:32:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004157.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004157hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1243 Protein kinase [Genera 100.0 7.2E-97 2E-101 819.9 40.8 519 15-571 9-558 (690)
2 KOG2137 Protein kinase [Signal 100.0 2.1E-43 4.7E-48 394.8 24.3 431 16-506 34-492 (700)
3 KOG0593 Predicted protein kina 100.0 7.9E-41 1.7E-45 339.6 15.3 242 20-286 3-289 (396)
4 KOG0575 Polo-like serine/threo 100.0 6.1E-40 1.3E-44 361.4 20.5 245 17-287 16-275 (592)
5 KOG0615 Serine/threonine prote 100.0 6.2E-40 1.3E-44 345.4 14.4 245 20-288 173-445 (475)
6 KOG0595 Serine/threonine-prote 100.0 1.3E-38 2.7E-43 336.3 19.8 235 19-280 10-268 (429)
7 KOG0661 MAPK related serine/th 100.0 1.2E-38 2.6E-43 340.9 13.5 245 17-287 8-297 (538)
8 KOG0581 Mitogen-activated prot 100.0 2.3E-37 5.1E-42 324.3 22.1 235 20-281 80-336 (364)
9 KOG0659 Cdk activating kinase 100.0 5.1E-38 1.1E-42 314.7 16.3 245 20-288 3-289 (318)
10 KOG0597 Serine-threonine prote 100.0 2.4E-38 5.3E-43 342.6 14.4 240 19-285 2-255 (808)
11 KOG0600 Cdc2-related protein k 100.0 1.2E-37 2.6E-42 335.5 18.5 244 19-284 117-403 (560)
12 KOG0660 Mitogen-activated prot 100.0 1.5E-37 3.3E-42 324.4 15.9 246 20-284 23-313 (359)
13 KOG0663 Protein kinase PITSLRE 100.0 3.1E-37 6.7E-42 317.2 17.5 264 20-306 77-387 (419)
14 KOG0592 3-phosphoinositide-dep 100.0 9.5E-37 2E-41 330.9 17.4 250 19-289 73-346 (604)
15 KOG0591 NIMA (never in mitosis 100.0 1.8E-37 3.9E-42 312.4 9.0 241 19-279 19-280 (375)
16 KOG0582 Ste20-like serine/thre 100.0 1.2E-35 2.5E-40 315.9 20.0 247 19-286 26-298 (516)
17 KOG0598 Ribosomal protein S6 k 100.0 1.1E-35 2.5E-40 311.6 17.8 246 18-290 24-290 (357)
18 KOG0578 p21-activated serine/t 100.0 5.4E-36 1.2E-40 327.9 15.4 238 17-284 271-526 (550)
19 KOG0594 Protein kinase PCTAIRE 100.0 4E-35 8.6E-40 307.4 20.6 250 19-286 11-307 (323)
20 KOG0588 Serine/threonine prote 100.0 1.3E-35 2.9E-40 327.7 17.4 238 19-282 12-265 (786)
21 KOG0583 Serine/threonine prote 100.0 5.9E-35 1.3E-39 321.8 21.4 243 18-285 16-279 (370)
22 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.9E-34 6.2E-39 313.4 21.7 250 20-286 1-295 (338)
23 KOG0658 Glycogen synthase kina 100.0 2.1E-35 4.5E-40 309.0 11.1 245 17-286 22-311 (364)
24 cd07869 STKc_PFTAIRE1 Catalyti 100.0 8.1E-34 1.8E-38 305.8 23.1 244 17-286 3-293 (303)
25 cd07848 STKc_CDKL5 Catalytic d 100.0 7.2E-34 1.6E-38 303.0 21.8 240 20-283 2-287 (287)
26 KOG0611 Predicted serine/threo 100.0 9.1E-35 2E-39 304.0 13.8 239 19-284 53-306 (668)
27 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.1E-33 2.3E-38 302.7 22.5 240 19-283 5-288 (288)
28 cd05612 STKc_PRKX_like Catalyt 100.0 4E-34 8.6E-39 306.7 17.8 237 20-286 2-259 (291)
29 PTZ00263 protein kinase A cata 100.0 4.4E-34 9.6E-39 312.0 17.8 240 17-286 16-276 (329)
30 KOG0605 NDR and related serine 100.0 1.5E-33 3.2E-38 306.6 19.5 257 18-296 140-460 (550)
31 cd07861 STKc_CDK1_euk Catalyti 100.0 5.4E-33 1.2E-37 295.5 23.3 241 20-282 1-284 (285)
32 KOG0198 MEKK and related serin 100.0 1.4E-33 3E-38 300.3 18.4 246 18-285 16-280 (313)
33 KOG0616 cAMP-dependent protein 100.0 2.1E-33 4.6E-38 285.3 18.2 239 19-287 44-303 (355)
34 cd05571 STKc_PKB Catalytic dom 100.0 1.4E-33 3.1E-38 307.2 18.3 234 26-286 2-256 (323)
35 KOG0585 Ca2+/calmodulin-depend 100.0 5.5E-34 1.2E-38 304.7 14.2 251 19-284 97-376 (576)
36 KOG0667 Dual-specificity tyros 100.0 2E-33 4.3E-38 313.3 18.6 195 19-243 186-390 (586)
37 cd07862 STKc_CDK6 Catalytic do 100.0 9.9E-33 2.1E-37 294.7 23.2 243 20-282 2-289 (290)
38 cd07863 STKc_CDK4 Catalytic do 100.0 8.8E-33 1.9E-37 294.6 22.7 243 20-282 1-287 (288)
39 KOG0192 Tyrosine kinase specif 100.0 7.2E-33 1.6E-37 302.9 22.3 238 20-280 42-299 (362)
40 KOG0033 Ca2+/calmodulin-depend 100.0 1.4E-34 3E-39 286.2 7.3 243 17-286 9-273 (355)
41 cd06649 PKc_MEK2 Catalytic dom 100.0 9.4E-33 2E-37 301.8 22.5 241 17-286 3-306 (331)
42 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.7E-33 8E-38 305.0 18.1 238 20-287 2-263 (333)
43 KOG0589 Serine/threonine prote 100.0 2.4E-33 5.3E-38 305.6 15.8 260 19-302 4-279 (426)
44 PHA03212 serine/threonine kina 100.0 9.5E-33 2.1E-37 308.7 20.5 237 16-286 89-381 (391)
45 cd07876 STKc_JNK2 Catalytic do 100.0 2.2E-32 4.8E-37 302.1 23.1 244 18-285 20-319 (359)
46 PTZ00036 glycogen synthase kin 100.0 1.4E-32 3E-37 312.1 21.9 247 17-285 64-355 (440)
47 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.2E-32 4.7E-37 295.5 22.4 243 18-286 5-291 (309)
48 cd05573 STKc_ROCK_NDR_like Cat 100.0 6.2E-33 1.3E-37 304.7 18.2 245 20-286 2-290 (350)
49 cd07853 STKc_NLK Catalytic dom 100.0 1.2E-32 2.6E-37 305.8 20.5 247 20-286 1-293 (372)
50 cd05631 STKc_GRK4 Catalytic do 100.0 2.4E-32 5.1E-37 291.9 20.9 240 21-286 2-266 (285)
51 cd05589 STKc_PKN Catalytic dom 100.0 1.1E-32 2.4E-37 300.2 18.6 238 21-286 1-262 (324)
52 cd06650 PKc_MEK1 Catalytic dom 100.0 2.9E-32 6.2E-37 298.3 21.9 241 17-286 3-304 (333)
53 cd05585 STKc_YPK1_like Catalyt 100.0 1.7E-32 3.6E-37 297.2 19.8 233 27-286 1-252 (312)
54 cd07868 STKc_CDK8 Catalytic do 100.0 5.2E-32 1.1E-36 293.3 23.6 241 19-282 2-316 (317)
55 cd05595 STKc_PKB_beta Catalyti 100.0 1.5E-32 3.2E-37 299.3 18.9 234 26-286 2-256 (323)
56 PTZ00426 cAMP-dependent protei 100.0 1E-32 2.3E-37 302.8 17.8 239 18-286 29-289 (340)
57 PLN00034 mitogen-activated pro 100.0 3.2E-32 6.9E-37 300.3 21.7 240 20-286 75-333 (353)
58 cd07874 STKc_JNK3 Catalytic do 100.0 3.5E-32 7.5E-37 300.0 22.0 244 18-285 16-315 (355)
59 cd05599 STKc_NDR_like Catalyti 100.0 1.2E-32 2.6E-37 304.6 18.3 245 20-286 2-301 (364)
60 PTZ00267 NIMA-related protein 100.0 6E-32 1.3E-36 310.1 24.5 238 20-280 68-323 (478)
61 cd07875 STKc_JNK1 Catalytic do 100.0 5.3E-32 1.1E-36 299.7 22.5 243 19-285 24-322 (364)
62 cd05593 STKc_PKB_gamma Catalyt 100.0 2.4E-32 5.2E-37 298.3 19.5 234 26-286 2-256 (328)
63 PTZ00283 serine/threonine prot 100.0 7.7E-32 1.7E-36 310.1 24.6 255 17-285 30-301 (496)
64 cd07832 STKc_CCRK Catalytic do 100.0 1.1E-31 2.4E-36 285.3 23.8 241 20-283 1-285 (286)
65 KOG0201 Serine/threonine prote 100.0 2.4E-33 5.1E-38 298.4 10.7 237 17-280 11-263 (467)
66 cd05601 STKc_CRIK Catalytic do 100.0 1.6E-32 3.5E-37 299.4 17.6 247 20-286 2-268 (330)
67 cd06625 STKc_MEKK3_like Cataly 100.0 1E-31 2.2E-36 282.0 22.9 240 20-282 3-262 (263)
68 cd05614 STKc_MSK2_N N-terminal 100.0 2.6E-32 5.6E-37 298.1 19.0 242 20-286 1-272 (332)
69 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.6E-32 7.9E-37 298.3 20.2 243 19-285 15-302 (343)
70 cd07873 STKc_PCTAIRE1 Catalyti 100.0 8.9E-32 1.9E-36 289.4 22.9 243 18-286 5-291 (301)
71 cd05594 STKc_PKB_alpha Catalyt 100.0 1.4E-32 3.1E-37 299.4 16.8 235 26-286 2-257 (325)
72 cd07839 STKc_CDK5 Catalytic do 100.0 4.3E-32 9.4E-37 288.6 20.0 240 20-283 1-284 (284)
73 cd08227 PK_STRAD_alpha Pseudok 100.0 1.4E-31 3E-36 291.8 24.2 249 22-286 1-312 (327)
74 cd05626 STKc_LATS2 Catalytic d 100.0 4.3E-32 9.4E-37 302.4 20.2 246 20-286 2-310 (381)
75 cd05596 STKc_ROCK Catalytic do 100.0 4E-32 8.8E-37 301.6 19.8 246 18-286 42-309 (370)
76 KOG0599 Phosphorylase kinase g 100.0 8.4E-33 1.8E-37 277.1 12.5 246 19-286 17-288 (411)
77 cd08529 STKc_FA2-like Catalyti 100.0 2.3E-31 5E-36 278.0 23.4 238 20-281 1-254 (256)
78 KOG0610 Putative serine/threon 100.0 6.9E-32 1.5E-36 285.3 19.5 252 20-290 78-401 (459)
79 cd05629 STKc_NDR_like_fungal C 100.0 4.9E-32 1.1E-36 301.4 19.2 245 20-286 2-310 (377)
80 cd05616 STKc_cPKC_beta Catalyt 100.0 8.7E-32 1.9E-36 293.0 20.7 240 20-286 1-262 (323)
81 cd05628 STKc_NDR1 Catalytic do 100.0 9.5E-32 2.1E-36 297.7 21.3 247 20-287 2-299 (363)
82 cd05598 STKc_LATS Catalytic do 100.0 2.2E-32 4.8E-37 304.0 16.3 245 20-286 2-306 (376)
83 PF00069 Pkinase: Protein kina 100.0 5.2E-32 1.1E-36 283.2 17.7 237 21-282 1-259 (260)
84 cd05625 STKc_LATS1 Catalytic d 100.0 5.9E-32 1.3E-36 301.3 18.7 245 20-286 2-310 (382)
85 cd05590 STKc_nPKC_eta Catalyti 100.0 7.8E-32 1.7E-36 293.2 19.2 234 26-286 2-258 (320)
86 KOG0032 Ca2+/calmodulin-depend 100.0 2.1E-31 4.5E-36 293.8 22.6 239 18-284 34-297 (382)
87 cd05621 STKc_ROCK2 Catalytic d 100.0 8.8E-32 1.9E-36 298.9 19.8 247 17-286 41-309 (370)
88 cd05584 STKc_p70S6K Catalytic 100.0 1.3E-31 2.7E-36 291.9 20.4 235 25-286 2-261 (323)
89 cd05575 STKc_SGK Catalytic dom 100.0 6.8E-32 1.5E-36 293.8 18.3 234 26-286 2-256 (323)
90 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.6E-31 3.6E-36 292.3 21.2 242 17-279 5-329 (338)
91 cd07843 STKc_CDC2L1 Catalytic 100.0 2.2E-31 4.8E-36 284.9 21.8 242 20-283 6-293 (293)
92 cd05591 STKc_nPKC_epsilon Cata 100.0 9.6E-32 2.1E-36 292.4 19.3 235 25-286 1-259 (321)
93 cd07841 STKc_CDK7 Catalytic do 100.0 2.5E-31 5.4E-36 285.0 22.1 242 20-286 1-287 (298)
94 cd05587 STKc_cPKC Catalytic do 100.0 1.5E-31 3.2E-36 291.4 20.4 240 20-286 1-262 (324)
95 cd07860 STKc_CDK2_3 Catalytic 100.0 2.2E-31 4.7E-36 283.3 21.0 241 20-283 1-284 (284)
96 KOG0662 Cyclin-dependent kinas 100.0 4.5E-32 9.7E-37 257.1 13.9 241 20-286 3-288 (292)
97 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.3E-31 7.2E-36 279.0 22.2 242 20-281 1-265 (267)
98 cd08223 STKc_Nek4 Catalytic do 100.0 6.5E-31 1.4E-35 275.0 24.0 240 20-282 1-256 (257)
99 cd07844 STKc_PCTAIRE_like Cata 100.0 3.7E-31 8.1E-36 282.7 22.6 239 19-282 5-290 (291)
100 cd05608 STKc_GRK1 Catalytic do 100.0 3.1E-31 6.8E-36 282.5 21.8 236 27-286 1-262 (280)
101 cd05588 STKc_aPKC Catalytic do 100.0 1.6E-31 3.4E-36 291.9 19.9 234 26-286 2-267 (329)
102 cd05582 STKc_RSK_N N-terminal 100.0 4.3E-32 9.4E-37 294.6 15.3 235 25-286 2-259 (318)
103 cd07845 STKc_CDK10 Catalytic d 100.0 2.7E-31 6E-36 286.7 21.4 246 17-285 5-294 (309)
104 cd07847 STKc_CDKL1_4 Catalytic 100.0 4.2E-31 9.1E-36 280.9 22.1 238 20-282 2-285 (286)
105 cd06610 STKc_OSR1_SPAK Catalyt 100.0 7.4E-31 1.6E-35 275.6 23.7 244 20-282 2-266 (267)
106 cd05618 STKc_aPKC_iota Catalyt 100.0 2E-31 4.3E-36 291.2 19.8 234 26-286 2-267 (329)
107 cd05622 STKc_ROCK1 Catalytic d 100.0 2.2E-31 4.7E-36 295.8 20.2 247 17-286 41-309 (371)
108 cd05570 STKc_PKC Catalytic dom 100.0 2E-31 4.3E-36 289.7 19.5 235 25-286 1-257 (318)
109 KOG0580 Serine/threonine prote 100.0 4.1E-32 8.9E-37 268.8 12.6 238 19-282 22-275 (281)
110 cd06615 PKc_MEK Catalytic doma 100.0 7.8E-31 1.7E-35 283.5 23.5 238 20-286 2-292 (308)
111 cd05627 STKc_NDR2 Catalytic do 100.0 1.4E-31 3E-36 296.0 17.8 246 20-287 2-299 (360)
112 KOG1989 ARK protein kinase fam 100.0 1.6E-31 3.4E-36 306.7 18.7 252 18-280 36-307 (738)
113 KOG0694 Serine/threonine prote 100.0 8.2E-32 1.8E-36 300.3 15.8 247 18-291 367-634 (694)
114 cd05605 STKc_GRK4_like Catalyt 100.0 4.8E-31 1E-35 281.9 21.3 241 20-286 1-266 (285)
115 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.8E-31 1E-35 281.1 21.1 244 20-282 2-264 (286)
116 KOG0666 Cyclin C-dependent kin 100.0 4.9E-32 1.1E-36 276.2 12.7 248 19-286 24-342 (438)
117 cd07867 STKc_CDC2L6 Catalytic 100.0 7.7E-31 1.7E-35 283.8 22.9 239 24-283 6-317 (317)
118 cd05592 STKc_nPKC_theta_delta 100.0 3.7E-31 8E-36 287.4 20.1 235 25-286 1-253 (316)
119 cd05620 STKc_nPKC_delta Cataly 100.0 4.1E-31 8.8E-36 287.1 20.3 236 25-287 1-254 (316)
120 cd08218 STKc_Nek1 Catalytic do 100.0 9.2E-31 2E-35 273.9 22.2 239 20-282 1-255 (256)
121 cd07836 STKc_Pho85 Catalytic d 100.0 9.7E-31 2.1E-35 278.0 22.6 241 20-283 1-284 (284)
122 PTZ00284 protein kinase; Provi 100.0 3.1E-31 6.8E-36 303.5 20.2 237 19-286 129-443 (467)
123 cd07865 STKc_CDK9 Catalytic do 100.0 1.2E-30 2.6E-35 280.6 23.6 252 20-283 13-310 (310)
124 cd06646 STKc_MAP4K5 Catalytic 100.0 1.3E-30 2.7E-35 274.9 23.2 239 17-280 7-265 (267)
125 cd07842 STKc_CDK8_like Catalyt 100.0 1.2E-30 2.5E-35 281.8 23.1 247 20-283 1-316 (316)
126 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.3E-30 2.8E-35 275.6 22.9 242 19-282 1-271 (272)
127 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.4E-30 3.1E-35 276.6 23.2 246 20-286 2-266 (283)
128 cd07855 STKc_ERK5 Catalytic do 100.0 4E-31 8.7E-36 289.0 19.4 250 18-285 4-298 (334)
129 cd05597 STKc_DMPK_like Catalyt 100.0 6.7E-31 1.5E-35 287.2 20.9 247 20-286 2-271 (331)
130 cd07837 STKc_CdkB_plant Cataly 100.0 1.4E-30 3E-35 278.6 22.8 247 20-284 2-294 (295)
131 PLN00009 cyclin-dependent kina 100.0 1.3E-30 2.9E-35 279.0 22.7 243 20-286 3-289 (294)
132 cd05602 STKc_SGK1 Catalytic do 100.0 3.7E-31 7.9E-36 288.4 18.5 235 25-286 1-256 (325)
133 cd08217 STKc_Nek2 Catalytic do 100.0 2.2E-30 4.9E-35 271.1 23.8 241 20-281 1-263 (265)
134 PHA03209 serine/threonine kina 100.0 7.7E-31 1.7E-35 289.9 21.3 234 18-286 65-356 (357)
135 cd05603 STKc_SGK2 Catalytic do 100.0 3.8E-31 8.1E-36 287.7 18.5 234 26-286 2-256 (321)
136 cd05574 STKc_phototropin_like 100.0 1.4E-30 3E-35 282.0 22.9 248 20-286 2-294 (316)
137 cd05604 STKc_SGK3 Catalytic do 100.0 3E-31 6.6E-36 289.0 17.7 235 25-286 1-256 (325)
138 cd07835 STKc_CDK1_like Catalyt 100.0 1.1E-30 2.4E-35 277.7 21.4 240 21-283 1-283 (283)
139 cd08221 STKc_Nek9 Catalytic do 100.0 2.9E-30 6.2E-35 270.2 24.2 237 20-280 1-253 (256)
140 cd05607 STKc_GRK7 Catalytic do 100.0 1.6E-30 3.5E-35 276.6 22.6 234 27-286 1-259 (277)
141 cd06655 STKc_PAK2 Catalytic do 100.0 1.1E-30 2.3E-35 281.0 21.4 250 2-284 5-272 (296)
142 cd06651 STKc_MEKK3 Catalytic d 100.0 1.8E-30 3.8E-35 274.0 22.6 244 19-285 2-265 (266)
143 cd05580 STKc_PKA Catalytic dom 100.0 1.3E-30 2.8E-35 278.9 21.7 237 20-286 2-259 (290)
144 cd07833 STKc_CDKL Catalytic do 100.0 1.4E-30 3.1E-35 277.1 21.9 240 20-282 2-287 (288)
145 cd07846 STKc_CDKL2_3 Catalytic 100.0 6.9E-31 1.5E-35 279.5 19.4 238 20-282 2-285 (286)
146 cd07831 STKc_MOK Catalytic dom 100.0 2.2E-30 4.7E-35 274.8 23.0 237 21-282 1-281 (282)
147 cd06609 STKc_MST3_like Catalyt 100.0 2.1E-30 4.6E-35 274.4 22.8 237 20-285 2-255 (274)
148 PHA03207 serine/threonine kina 100.0 9.2E-31 2E-35 292.9 21.1 239 18-288 91-382 (392)
149 cd06630 STKc_MEKK1 Catalytic d 100.0 1.9E-30 4E-35 273.2 22.2 242 20-284 1-267 (268)
150 cd08220 STKc_Nek8 Catalytic do 100.0 2.5E-30 5.5E-35 270.1 22.9 237 20-281 1-254 (256)
151 cd06644 STKc_STK10_LOK Catalyt 100.0 4E-30 8.6E-35 275.3 24.7 247 17-286 10-274 (292)
152 cd06612 STKc_MST1_2 Catalytic 100.0 2.5E-30 5.4E-35 270.1 22.6 236 18-282 2-255 (256)
153 PHA03211 serine/threonine kina 100.0 1.5E-30 3.2E-35 295.7 22.6 238 17-286 167-460 (461)
154 cd05619 STKc_nPKC_theta Cataly 100.0 9.7E-31 2.1E-35 284.2 20.0 235 25-286 1-253 (316)
155 cd07866 STKc_BUR1 Catalytic do 100.0 1.6E-30 3.6E-35 279.7 21.4 255 18-282 7-310 (311)
156 cd07850 STKc_JNK Catalytic dom 100.0 1.5E-30 3.2E-35 286.9 21.5 241 18-281 15-312 (353)
157 KOG4721 Serine/threonine prote 100.0 2.8E-31 6.1E-36 287.5 15.4 226 26-289 131-373 (904)
158 cd07864 STKc_CDK12 Catalytic d 100.0 2E-30 4.3E-35 278.3 22.0 250 18-282 6-301 (302)
159 cd06656 STKc_PAK3 Catalytic do 100.0 1.8E-30 4E-35 279.1 21.6 238 17-284 17-272 (297)
160 cd07849 STKc_ERK1_2_like Catal 100.0 1.4E-30 3E-35 285.1 20.9 247 19-285 5-296 (336)
161 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.4E-30 3E-35 284.2 20.8 235 26-287 2-266 (327)
162 cd06654 STKc_PAK1 Catalytic do 100.0 2.2E-30 4.7E-35 278.4 21.9 238 17-283 18-273 (296)
163 cd05096 PTKc_DDR1 Catalytic do 100.0 2.1E-30 4.6E-35 279.2 21.8 241 17-279 3-300 (304)
164 KOG0586 Serine/threonine prote 100.0 7.6E-31 1.6E-35 289.9 18.5 239 19-283 56-309 (596)
165 cd05578 STKc_Yank1 Catalytic d 100.0 1E-30 2.2E-35 274.1 18.6 236 20-282 1-257 (258)
166 cd06645 STKc_MAP4K3 Catalytic 100.0 2.6E-30 5.5E-35 272.5 21.6 240 17-281 7-266 (267)
167 cd07870 STKc_PFTAIRE2 Catalyti 100.0 3.8E-30 8.2E-35 275.1 23.2 239 19-282 5-290 (291)
168 PHA02988 hypothetical protein; 100.0 1.7E-30 3.6E-35 277.8 20.1 232 26-280 27-275 (283)
169 cd06613 STKc_MAP4K3_like Catal 100.0 4.1E-30 9E-35 269.4 22.5 241 17-281 1-261 (262)
170 cd05586 STKc_Sck1_like Catalyt 100.0 4.3E-31 9.3E-36 288.3 15.6 234 27-286 1-258 (330)
171 cd05048 PTKc_Ror Catalytic Dom 100.0 3.2E-30 6.9E-35 274.2 21.8 239 20-280 6-279 (283)
172 cd06619 PKc_MKK5 Catalytic dom 100.0 5.6E-30 1.2E-34 272.5 23.6 231 20-283 2-256 (279)
173 cd06631 STKc_YSK4 Catalytic do 100.0 5.4E-30 1.2E-34 269.7 23.0 242 20-282 1-264 (265)
174 PTZ00266 NIMA-related protein 100.0 2.6E-30 5.7E-35 308.2 22.6 245 17-280 11-295 (1021)
175 KOG0197 Tyrosine kinases [Sign 100.0 1.2E-30 2.5E-35 285.6 17.9 231 21-278 208-455 (468)
176 KOG2345 Serine/threonine prote 100.0 6.6E-31 1.4E-35 261.3 14.5 255 16-280 18-296 (302)
177 cd05052 PTKc_Abl Catalytic dom 100.0 4.7E-30 1E-34 270.2 22.0 237 18-280 5-258 (263)
178 PHA03210 serine/threonine kina 100.0 2.1E-30 4.5E-35 298.8 20.8 256 19-297 148-470 (501)
179 cd05615 STKc_cPKC_alpha Cataly 100.0 2E-30 4.3E-35 282.5 19.5 240 20-286 1-262 (323)
180 cd08219 STKc_Nek3 Catalytic do 100.0 5.2E-30 1.1E-34 268.3 21.8 236 20-280 1-252 (255)
181 cd06637 STKc_TNIK Catalytic do 100.0 6.3E-30 1.4E-34 270.0 22.6 249 18-282 5-271 (272)
182 cd08228 STKc_Nek6 Catalytic do 100.0 5.5E-30 1.2E-34 269.7 21.8 238 20-280 3-261 (267)
183 cd06652 STKc_MEKK2 Catalytic d 100.0 6.1E-30 1.3E-34 269.5 22.1 241 19-281 2-262 (265)
184 cd06608 STKc_myosinIII_like Ca 100.0 7.6E-30 1.7E-34 268.8 22.8 251 17-282 4-274 (275)
185 cd06606 STKc_MAPKKK Catalytic 100.0 1E-29 2.2E-34 264.4 23.4 241 20-282 1-259 (260)
186 KOG4717 Serine/threonine prote 100.0 9.5E-31 2.1E-35 280.5 15.8 238 21-283 20-273 (864)
187 KOG0596 Dual specificity; seri 100.0 1.7E-30 3.7E-35 282.2 17.9 246 16-280 358-627 (677)
188 cd05064 PTKc_EphR_A10 Catalyti 100.0 5.3E-30 1.1E-34 270.7 21.2 237 18-279 4-260 (266)
189 cd06607 STKc_TAO Catalytic dom 100.0 1.5E-29 3.2E-34 273.2 25.1 243 17-285 13-272 (307)
190 cd06917 STKc_NAK1_like Catalyt 100.0 7.9E-30 1.7E-34 270.2 22.4 243 20-290 2-264 (277)
191 cd05084 PTKc_Fes Catalytic dom 100.0 6.7E-30 1.5E-34 267.0 21.6 231 25-279 1-248 (252)
192 cd05630 STKc_GRK6 Catalytic do 100.0 6.7E-30 1.5E-34 273.1 22.0 239 21-285 2-265 (285)
193 cd08225 STKc_Nek5 Catalytic do 100.0 5.2E-30 1.1E-34 267.9 20.6 239 20-282 1-256 (257)
194 cd06643 STKc_SLK Catalytic dom 100.0 9.3E-30 2E-34 270.8 22.8 242 21-285 7-266 (282)
195 cd06626 STKc_MEKK4 Catalytic d 100.0 1.3E-29 2.8E-34 265.9 23.5 244 20-282 1-263 (264)
196 cd05572 STKc_cGK_PKG Catalytic 100.0 8.5E-30 1.8E-34 267.8 22.1 232 27-286 1-257 (262)
197 cd06605 PKc_MAPKK Catalytic do 100.0 3.2E-30 6.8E-35 271.0 18.9 238 20-285 2-261 (265)
198 cd05624 STKc_MRCK_beta Catalyt 100.0 3.4E-30 7.4E-35 281.7 19.7 247 20-286 2-271 (331)
199 cd06611 STKc_SLK_like Catalyti 100.0 9.7E-30 2.1E-34 270.2 22.6 246 17-285 3-266 (280)
200 cd06627 STKc_Cdc7_like Catalyt 100.0 1.5E-29 3.2E-34 263.4 23.5 238 20-284 1-254 (254)
201 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.5E-29 3.3E-34 265.8 23.8 237 20-279 3-260 (267)
202 cd05623 STKc_MRCK_alpha Cataly 100.0 4E-30 8.8E-35 281.1 20.0 248 20-287 2-272 (332)
203 cd07858 STKc_TEY_MAPK_plant Ca 100.0 3.6E-30 7.8E-35 282.0 19.6 246 18-284 4-294 (337)
204 cd08226 PK_STRAD_beta Pseudoki 100.0 5.9E-30 1.3E-34 279.2 21.1 248 24-286 3-313 (328)
205 cd05106 PTKc_CSF-1R Catalytic 100.0 5.6E-30 1.2E-34 284.9 21.3 240 18-279 37-367 (374)
206 cd06623 PKc_MAPKK_plant_like C 100.0 1.1E-29 2.3E-34 266.4 22.3 238 20-284 2-259 (264)
207 cd05632 STKc_GRK5 Catalytic do 100.0 9.3E-30 2E-34 271.9 22.1 240 21-286 2-266 (285)
208 cd07840 STKc_CDK9_like Catalyt 100.0 8.4E-30 1.8E-34 270.5 21.6 242 21-283 1-287 (287)
209 cd05035 PTKc_Axl_like Catalyti 100.0 1.4E-29 3.1E-34 267.0 22.9 245 21-280 1-268 (273)
210 cd06640 STKc_MST4 Catalytic do 100.0 6.6E-30 1.4E-34 271.4 20.3 239 19-286 4-258 (277)
211 cd07829 STKc_CDK_like Catalyti 100.0 9E-30 2E-34 269.8 21.3 238 21-282 1-281 (282)
212 cd07852 STKc_MAPK15 Catalytic 100.0 7.1E-30 1.5E-34 279.4 21.0 248 18-285 6-299 (337)
213 cd06632 STKc_MEKK1_plant Catal 100.0 1.1E-29 2.3E-34 265.4 21.2 236 20-281 1-256 (258)
214 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.1E-29 2.5E-34 270.6 21.8 241 18-286 4-272 (284)
215 cd06647 STKc_PAK_I Catalytic d 100.0 8.3E-30 1.8E-34 273.5 20.7 239 17-285 17-273 (293)
216 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.4E-29 3.1E-34 276.4 22.8 238 18-284 9-291 (328)
217 cd05104 PTKc_Kit Catalytic dom 100.0 8.2E-30 1.8E-34 283.6 21.2 241 18-280 34-370 (375)
218 cd07834 STKc_MAPK Catalytic do 100.0 6.1E-30 1.3E-34 278.7 19.5 249 20-286 1-294 (330)
219 cd07838 STKc_CDK4_6_like Catal 100.0 1.9E-29 4.2E-34 268.0 22.9 242 21-282 1-286 (287)
220 cd06642 STKc_STK25-YSK1 Cataly 100.0 5E-30 1.1E-34 272.2 18.2 233 20-280 5-253 (277)
221 cd05609 STKc_MAST Catalytic do 100.0 1.7E-29 3.7E-34 272.4 22.3 245 20-285 2-277 (305)
222 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.9E-29 4.1E-34 268.3 22.3 250 17-282 14-281 (282)
223 cd05049 PTKc_Trk Catalytic dom 100.0 1.4E-29 3.1E-34 268.4 21.4 241 18-280 4-277 (280)
224 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.9E-29 6.4E-34 268.0 23.8 242 20-286 2-271 (287)
225 cd05122 PKc_STE Catalytic doma 100.0 3.8E-29 8.3E-34 259.0 23.7 234 20-281 1-252 (253)
226 cd08229 STKc_Nek7 Catalytic do 100.0 1.6E-29 3.5E-34 266.2 21.2 238 20-280 3-261 (267)
227 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.6E-29 3.6E-34 277.6 21.9 244 19-286 15-303 (343)
228 cd07879 STKc_p38delta_MAPK13 C 100.0 1.4E-29 3E-34 278.0 21.1 242 19-285 15-301 (342)
229 cd05090 PTKc_Ror1 Catalytic do 100.0 2.5E-29 5.4E-34 267.7 22.4 240 19-280 5-279 (283)
230 cd00192 PTKc Catalytic domain 100.0 2.9E-29 6.4E-34 261.8 22.4 234 25-280 1-260 (262)
231 cd06616 PKc_MKK4 Catalytic dom 100.0 1.7E-29 3.7E-34 269.5 21.0 244 20-285 5-271 (288)
232 cd06659 STKc_PAK6 Catalytic do 100.0 1.4E-29 3E-34 272.4 20.5 242 18-288 20-279 (297)
233 cd05118 STKc_CMGC Catalytic do 100.0 1.4E-29 3E-34 268.5 20.1 238 21-282 1-282 (283)
234 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.3E-29 2.8E-34 266.0 19.6 236 18-280 5-257 (261)
235 cd05082 PTKc_Csk Catalytic dom 100.0 2.9E-29 6.3E-34 263.0 22.2 231 18-280 5-252 (256)
236 cd05581 STKc_PDK1 Catalytic do 100.0 1.5E-29 3.3E-34 267.5 20.2 243 20-282 2-279 (280)
237 PF07714 Pkinase_Tyr: Protein 100.0 4E-30 8.6E-35 271.0 15.6 235 22-279 2-257 (259)
238 cd05075 PTKc_Axl Catalytic dom 100.0 3.7E-29 8E-34 264.2 22.9 245 21-280 1-267 (272)
239 cd05108 PTKc_EGFR Catalytic do 100.0 2E-29 4.4E-34 273.3 21.4 239 17-280 5-264 (316)
240 cd05036 PTKc_ALK_LTK Catalytic 100.0 3E-29 6.5E-34 266.4 22.0 241 18-280 5-274 (277)
241 cd05089 PTKc_Tie1 Catalytic do 100.0 2.4E-29 5.2E-34 270.2 21.5 236 20-280 3-271 (297)
242 cd05060 PTKc_Syk_like Catalyti 100.0 4.2E-29 9.2E-34 261.9 22.8 229 25-279 1-250 (257)
243 cd06639 STKc_myosinIIIB Cataly 100.0 5.4E-29 1.2E-33 266.2 24.1 251 17-284 20-290 (291)
244 KOG0604 MAP kinase-activated p 100.0 7.6E-31 1.6E-35 266.5 9.0 242 20-289 62-331 (400)
245 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.7E-29 7.9E-34 262.2 22.1 232 20-279 5-253 (256)
246 KOG0669 Cyclin T-dependent kin 100.0 1.3E-31 2.9E-36 266.0 3.2 258 20-289 18-324 (376)
247 cd05059 PTKc_Tec_like Catalyti 100.0 3.8E-29 8.2E-34 262.3 22.0 233 20-280 5-254 (256)
248 cd08215 STKc_Nek Catalytic dom 100.0 5.3E-29 1.1E-33 259.3 22.8 240 20-282 1-257 (258)
249 cd05577 STKc_GRK Catalytic dom 100.0 3.8E-29 8.3E-34 265.6 22.1 233 27-285 1-258 (277)
250 cd05072 PTKc_Lyn Catalytic dom 100.0 3.5E-29 7.6E-34 262.9 21.6 235 18-279 5-256 (261)
251 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.8E-29 1E-33 262.8 22.6 241 19-281 2-262 (264)
252 cd08216 PK_STRAD Pseudokinase 100.0 3E-29 6.6E-34 271.1 21.4 247 21-285 4-299 (314)
253 cd05116 PTKc_Syk Catalytic dom 100.0 3.9E-29 8.5E-34 262.4 21.4 231 26-280 2-251 (257)
254 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.7E-29 3.7E-34 277.3 19.4 250 18-285 4-304 (342)
255 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.8E-29 8.2E-34 266.3 21.5 236 21-279 6-276 (283)
256 cd05071 PTKc_Src Catalytic dom 100.0 4E-29 8.7E-34 263.4 21.4 234 18-279 5-255 (262)
257 PRK13184 pknD serine/threonine 100.0 3.9E-29 8.6E-34 297.1 23.7 242 20-278 3-283 (932)
258 cd08530 STKc_CNK2-like Catalyt 100.0 3.7E-29 7.9E-34 261.1 20.8 237 20-281 1-254 (256)
259 KOG4279 Serine/threonine prote 100.0 2E-30 4.4E-35 285.7 11.7 245 17-285 568-836 (1226)
260 cd06614 STKc_PAK Catalytic dom 100.0 6.4E-29 1.4E-33 264.9 23.1 241 17-286 17-275 (286)
261 cd05062 PTKc_IGF-1R Catalytic 100.0 4E-29 8.6E-34 265.3 21.4 241 18-280 5-274 (277)
262 cd05032 PTKc_InsR_like Catalyt 100.0 3.6E-29 7.9E-34 264.9 21.0 242 17-280 4-274 (277)
263 cd06638 STKc_myosinIIIA Cataly 100.0 8E-29 1.7E-33 263.8 23.6 249 17-281 16-284 (286)
264 cd07851 STKc_p38 Catalytic dom 100.0 1.4E-29 2.9E-34 278.2 18.2 245 18-286 14-303 (343)
265 cd05053 PTKc_FGFR Catalytic do 100.0 2.9E-29 6.2E-34 268.4 20.2 242 17-280 10-287 (293)
266 cd05579 STKc_MAST_like Catalyt 100.0 4.2E-29 9.1E-34 261.4 21.0 239 27-286 1-262 (265)
267 KOG1035 eIF-2alpha kinase GCN2 100.0 2E-29 4.3E-34 294.4 20.1 252 20-285 480-875 (1351)
268 cd05091 PTKc_Ror2 Catalytic do 100.0 4E-29 8.7E-34 265.9 21.0 239 20-280 6-279 (283)
269 cd06641 STKc_MST3 Catalytic do 100.0 4.6E-29 1E-33 265.0 21.4 237 21-286 6-258 (277)
270 cd05033 PTKc_EphR Catalytic do 100.0 6.2E-29 1.3E-33 262.0 22.2 238 19-280 4-261 (266)
271 KOG4236 Serine/threonine prote 100.0 2.3E-30 4.9E-35 278.2 11.3 248 21-295 564-834 (888)
272 cd07877 STKc_p38alpha_MAPK14 C 100.0 4.7E-29 1E-33 274.2 22.1 245 18-286 16-305 (345)
273 cd05113 PTKc_Btk_Bmx Catalytic 100.0 5E-29 1.1E-33 261.8 21.3 234 19-280 4-254 (256)
274 cd05068 PTKc_Frk_like Catalyti 100.0 6.6E-29 1.4E-33 261.1 22.2 236 18-280 5-257 (261)
275 cd05093 PTKc_TrkB Catalytic do 100.0 6.5E-29 1.4E-33 265.5 22.5 240 17-279 3-274 (288)
276 PTZ00024 cyclin-dependent prot 100.0 5E-29 1.1E-33 272.4 22.0 249 18-286 7-318 (335)
277 cd05040 PTKc_Ack_like Catalyti 100.0 8.2E-29 1.8E-33 259.3 22.5 232 25-280 1-254 (257)
278 cd06624 STKc_ASK Catalytic dom 100.0 1E-28 2.3E-33 260.6 23.1 234 26-282 15-267 (268)
279 cd05045 PTKc_RET Catalytic dom 100.0 7.9E-29 1.7E-33 265.0 22.5 238 20-279 1-281 (290)
280 cd05056 PTKc_FAK Catalytic dom 100.0 6.9E-29 1.5E-33 262.3 21.6 238 17-280 4-261 (270)
281 cd05088 PTKc_Tie2 Catalytic do 100.0 4E-29 8.7E-34 269.5 20.2 237 19-280 7-276 (303)
282 cd06635 STKc_TAO1 Catalytic do 100.0 1.3E-28 2.8E-33 267.3 24.3 241 19-285 25-282 (317)
283 cd05054 PTKc_VEGFR Catalytic d 100.0 4E-29 8.8E-34 274.0 20.5 243 17-280 5-329 (337)
284 cd06633 STKc_TAO3 Catalytic do 100.0 1.5E-28 3.3E-33 266.4 24.7 240 20-286 22-278 (313)
285 cd07857 STKc_MPK1 Catalytic do 100.0 5.2E-29 1.1E-33 272.2 21.2 246 20-282 1-294 (332)
286 cd05105 PTKc_PDGFR_alpha Catal 100.0 6.8E-29 1.5E-33 278.3 22.6 241 17-279 35-392 (400)
287 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1E-28 2.3E-33 262.8 23.0 241 18-280 3-279 (284)
288 cd05051 PTKc_DDR Catalytic dom 100.0 1.1E-28 2.5E-33 263.9 22.9 242 17-280 3-293 (296)
289 cd05067 PTKc_Lck_Blk Catalytic 100.0 9.8E-29 2.1E-33 259.6 21.9 236 16-279 3-255 (260)
290 KOG0193 Serine/threonine prote 100.0 1.2E-29 2.5E-34 278.8 15.2 236 20-279 393-648 (678)
291 cd06634 STKc_TAO2 Catalytic do 100.0 1.3E-28 2.8E-33 266.2 23.2 244 17-286 13-273 (308)
292 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 9.4E-29 2E-33 263.6 21.5 240 20-280 5-279 (284)
293 cd05043 PTK_Ryk Pseudokinase d 100.0 9.8E-29 2.1E-33 262.5 21.5 243 17-280 4-272 (280)
294 cd05034 PTKc_Src_like Catalyti 100.0 1.4E-28 2.9E-33 258.2 22.2 236 17-279 4-256 (261)
295 cd05039 PTKc_Csk_like Catalyti 100.0 1.2E-28 2.6E-33 258.1 21.7 231 18-280 5-252 (256)
296 cd06618 PKc_MKK7 Catalytic dom 100.0 1.2E-28 2.6E-33 264.6 22.1 247 16-285 12-277 (296)
297 smart00219 TyrKc Tyrosine kina 100.0 1.6E-28 3.5E-33 256.3 22.4 235 21-279 1-256 (258)
298 cd06648 STKc_PAK_II Catalytic 100.0 1.9E-28 4.1E-33 261.8 23.4 237 20-286 20-274 (285)
299 cd05097 PTKc_DDR_like Catalyti 100.0 1.1E-28 2.5E-33 264.5 21.7 240 17-279 3-291 (295)
300 cd07830 STKc_MAK_like Catalyti 100.0 8.8E-29 1.9E-33 262.8 20.7 237 21-282 1-282 (283)
301 cd05092 PTKc_TrkA Catalytic do 100.0 1.7E-28 3.6E-33 261.2 22.7 239 18-279 4-276 (280)
302 cd05047 PTKc_Tie Catalytic dom 100.0 1.4E-28 3.1E-33 260.2 22.0 230 26-280 2-264 (270)
303 cd05066 PTKc_EphR_A Catalytic 100.0 1.5E-28 3.2E-33 259.5 21.7 238 19-279 4-261 (267)
304 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.8E-28 4E-33 258.5 22.3 239 19-280 5-263 (268)
305 cd05069 PTKc_Yes Catalytic dom 100.0 1.4E-28 2.9E-33 258.7 21.2 235 17-279 4-255 (260)
306 cd05611 STKc_Rim15_like Cataly 100.0 1.1E-28 2.3E-33 259.1 20.2 231 25-286 2-256 (260)
307 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.8E-28 3.8E-33 265.7 22.5 242 17-280 10-289 (314)
308 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.4E-28 3E-33 265.6 21.3 241 18-280 17-295 (307)
309 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.6E-28 3.5E-33 257.9 21.3 235 17-279 4-255 (260)
310 cd06658 STKc_PAK5 Catalytic do 100.0 4.4E-29 9.5E-34 267.9 17.1 236 20-285 23-276 (292)
311 cd05046 PTK_CCK4 Pseudokinase 100.0 1.6E-28 3.4E-33 260.0 21.0 241 17-280 3-272 (275)
312 cd05061 PTKc_InsR Catalytic do 100.0 2E-28 4.2E-33 261.8 21.9 240 18-279 5-273 (288)
313 cd05123 STKc_AGC Catalytic dom 100.0 1.7E-28 3.7E-33 255.3 20.9 230 27-282 1-249 (250)
314 cd05041 PTKc_Fes_like Catalyti 100.0 3E-28 6.5E-33 254.1 22.8 231 25-280 1-248 (251)
315 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.5E-28 3.3E-33 264.7 21.2 242 17-280 13-292 (304)
316 cd05633 STKc_GRK3 Catalytic do 100.0 1.8E-28 3.8E-33 261.4 21.3 232 27-286 2-260 (279)
317 cd05109 PTKc_HER2 Catalytic do 100.0 2.5E-28 5.5E-33 259.4 22.3 238 17-279 5-263 (279)
318 cd05085 PTKc_Fer Catalytic dom 100.0 3.3E-28 7.2E-33 253.6 22.8 230 25-280 1-247 (250)
319 cd05094 PTKc_TrkC Catalytic do 100.0 2E-28 4.4E-33 262.1 21.7 240 18-280 4-278 (291)
320 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.7E-28 3.7E-33 260.3 20.8 241 19-280 4-279 (284)
321 cd05095 PTKc_DDR2 Catalytic do 100.0 2.8E-28 6E-33 261.7 22.4 241 17-279 3-292 (296)
322 cd05065 PTKc_EphR_B Catalytic 100.0 2.6E-28 5.6E-33 257.7 21.8 239 20-279 5-263 (269)
323 KOG0577 Serine/threonine prote 100.0 9.2E-30 2E-34 276.8 10.6 237 21-283 28-281 (948)
324 cd05057 PTKc_EGFR_like Catalyt 100.0 4.3E-28 9.3E-33 257.6 23.0 237 18-279 6-263 (279)
325 cd05050 PTKc_Musk Catalytic do 100.0 3.1E-28 6.8E-33 259.9 22.0 241 17-279 3-284 (288)
326 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.4E-28 5.1E-33 267.2 21.3 242 17-280 10-289 (334)
327 KOG0579 Ste20-like serine/thre 100.0 8.5E-30 1.8E-34 278.1 9.6 243 21-286 34-294 (1187)
328 PHA03390 pk1 serine/threonine- 100.0 3.9E-28 8.6E-33 257.0 22.0 229 20-286 15-267 (267)
329 KOG0607 MAP kinase-interacting 100.0 2.3E-29 5.1E-34 257.3 11.6 245 21-285 79-365 (463)
330 cd05115 PTKc_Zap-70 Catalytic 100.0 5.7E-28 1.2E-32 254.0 22.6 231 26-280 2-251 (257)
331 cd05613 STKc_MSK1_N N-terminal 100.0 3.5E-28 7.5E-33 259.8 21.2 243 20-286 1-273 (290)
332 cd05055 PTKc_PDGFR Catalytic d 100.0 4.3E-28 9.3E-33 261.5 21.8 241 17-280 33-297 (302)
333 cd05074 PTKc_Tyro3 Catalytic d 100.0 6.5E-28 1.4E-32 254.8 22.7 245 21-280 1-268 (273)
334 KOG0574 STE20-like serine/thre 100.0 2.6E-30 5.7E-35 261.9 4.0 246 19-295 33-298 (502)
335 cd06657 STKc_PAK4 Catalytic do 100.0 3.8E-28 8.1E-33 260.8 20.8 236 21-286 22-275 (292)
336 cd05058 PTKc_Met_Ron Catalytic 100.0 6.1E-28 1.3E-32 253.4 21.8 235 25-280 1-255 (262)
337 cd08528 STKc_Nek10 Catalytic d 100.0 1E-27 2.2E-32 252.9 23.1 238 20-280 1-266 (269)
338 cd05083 PTKc_Chk Catalytic dom 100.0 5.1E-28 1.1E-32 253.2 20.6 226 20-279 7-249 (254)
339 cd05111 PTK_HER3 Pseudokinase 100.0 9.3E-28 2E-32 255.5 22.8 237 19-280 7-264 (279)
340 cd05112 PTKc_Itk Catalytic dom 100.0 7.9E-28 1.7E-32 251.7 21.8 233 20-280 5-254 (256)
341 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.2E-28 4.7E-33 257.0 17.5 226 25-280 1-256 (258)
342 KOG0584 Serine/threonine prote 100.0 7.2E-29 1.6E-33 274.4 14.2 242 17-286 37-301 (632)
343 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.4E-28 1.2E-32 265.6 21.1 243 17-280 5-335 (343)
344 cd05073 PTKc_Hck Catalytic dom 100.0 9.5E-28 2.1E-32 252.3 22.1 235 17-279 4-255 (260)
345 KOG1240 Protein kinase contain 100.0 4.2E-28 9E-33 280.2 20.8 465 20-502 24-636 (1431)
346 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 8.3E-28 1.8E-32 253.7 21.5 226 25-280 1-260 (262)
347 cd05044 PTKc_c-ros Catalytic d 100.0 5.9E-28 1.3E-32 254.6 19.8 232 26-279 2-265 (269)
348 cd05606 STKc_beta_ARK Catalyti 100.0 1.1E-27 2.4E-32 254.9 22.0 232 27-286 2-260 (278)
349 cd05042 PTKc_Aatyk Catalytic d 100.0 1.4E-27 2.9E-32 252.2 22.0 238 26-280 2-266 (269)
350 KOG4645 MAPKKK (MAP kinase kin 100.0 1.3E-29 2.9E-34 296.9 6.0 245 17-280 1233-1494(1509)
351 cd08222 STKc_Nek11 Catalytic d 100.0 8.9E-28 1.9E-32 252.1 19.1 239 20-282 1-259 (260)
352 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.4E-27 3E-32 267.7 21.6 243 16-280 34-395 (401)
353 cd05583 STKc_MSK_N N-terminal 100.0 1E-27 2.2E-32 255.9 19.3 245 20-288 1-273 (288)
354 cd05110 PTKc_HER4 Catalytic do 100.0 2.2E-27 4.8E-32 255.8 21.8 238 18-280 6-264 (303)
355 KOG0670 U4/U6-associated splic 100.0 9.8E-29 2.1E-33 265.9 9.7 237 20-285 433-750 (752)
356 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 5.9E-27 1.3E-31 247.5 23.1 238 26-280 2-266 (269)
357 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.3E-27 7.1E-32 247.0 20.7 225 25-280 1-257 (259)
358 KOG0983 Mitogen-activated prot 100.0 7.2E-28 1.6E-32 242.1 14.6 236 23-281 96-350 (391)
359 PHA02882 putative serine/threo 100.0 9.1E-27 2E-31 250.2 24.2 248 16-279 9-291 (294)
360 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 5.8E-27 1.3E-31 249.0 20.9 225 26-280 2-272 (274)
361 cd05576 STKc_RPK118_like Catal 99.9 5E-27 1.1E-31 244.0 19.0 214 35-282 8-236 (237)
362 KOG0671 LAMMER dual specificit 99.9 3.4E-28 7.3E-33 255.2 10.1 239 17-286 87-411 (415)
363 cd05086 PTKc_Aatyk2 Catalytic 99.9 2.1E-26 4.5E-31 243.5 23.5 238 26-280 2-265 (268)
364 KOG0690 Serine/threonine prote 99.9 6.6E-28 1.4E-32 246.9 9.9 245 18-289 167-432 (516)
365 KOG0612 Rho-associated, coiled 99.9 1E-27 2.2E-32 278.1 11.1 256 17-294 73-351 (1317)
366 cd05610 STKc_MASTL Catalytic d 99.9 1.9E-26 4.2E-31 274.3 21.6 145 19-177 4-152 (669)
367 KOG1026 Nerve growth factor re 99.9 4.3E-27 9.2E-32 269.1 14.8 234 20-277 487-755 (774)
368 KOG0665 Jun-N-terminal kinase 99.9 2.3E-27 4.9E-32 243.8 11.3 244 18-285 16-314 (369)
369 PLN03225 Serine/threonine-prot 99.9 1.5E-26 3.3E-31 269.1 19.1 274 18-308 131-477 (566)
370 KOG1187 Serine/threonine prote 99.9 2.4E-26 5.3E-31 252.9 19.6 233 21-279 77-347 (361)
371 KOG0603 Ribosomal protein S6 k 99.9 6.3E-27 1.4E-31 260.2 14.4 233 19-287 322-570 (612)
372 KOG4257 Focal adhesion tyrosin 99.9 1.7E-26 3.6E-31 252.9 17.4 231 23-279 393-644 (974)
373 KOG1095 Protein tyrosine kinas 99.9 2.7E-26 6E-31 271.2 20.4 241 16-280 686-957 (1025)
374 KOG0587 Traf2- and Nck-interac 99.9 3.1E-26 6.7E-31 260.7 19.8 252 16-285 16-286 (953)
375 KOG0194 Protein tyrosine kinas 99.9 8.2E-27 1.8E-31 259.1 14.7 233 22-279 160-415 (474)
376 KOG4250 TANK binding protein k 99.9 5.7E-27 1.2E-31 262.3 12.8 207 18-242 12-225 (732)
377 smart00220 S_TKc Serine/Threon 99.9 6.4E-26 1.4E-30 232.9 19.2 221 35-281 4-242 (244)
378 KOG1027 Serine/threonine prote 99.9 7.8E-27 1.7E-31 264.4 12.7 235 24-286 514-773 (903)
379 KOG0664 Nemo-like MAPK-related 99.9 7.1E-28 1.5E-32 241.6 1.7 243 19-280 53-343 (449)
380 KOG0668 Casein kinase II, alph 99.9 2E-26 4.3E-31 226.5 11.6 236 17-286 36-327 (338)
381 KOG4278 Protein tyrosine kinas 99.9 5.4E-26 1.2E-30 248.2 13.6 231 23-279 271-518 (1157)
382 KOG0614 cGMP-dependent protein 99.9 9.6E-27 2.1E-31 250.1 6.5 239 20-286 421-682 (732)
383 KOG1006 Mitogen-activated prot 99.9 6.6E-27 1.4E-31 234.5 4.5 238 25-285 70-331 (361)
384 KOG0986 G protein-coupled rece 99.9 5.3E-26 1.1E-30 242.2 10.9 242 19-286 185-451 (591)
385 KOG0696 Serine/threonine prote 99.9 7.8E-26 1.7E-30 237.6 10.7 254 16-295 346-620 (683)
386 KOG2052 Activin A type IB rece 99.9 4.7E-25 1E-29 235.1 16.7 239 20-277 212-496 (513)
387 KOG1094 Discoidin domain recep 99.9 4.7E-25 1E-29 240.6 15.6 234 20-279 539-799 (807)
388 PLN03224 probable serine/threo 99.9 4.5E-24 9.7E-29 243.3 21.9 262 16-286 142-505 (507)
389 KOG0199 ACK and related non-re 99.9 6.9E-25 1.5E-29 243.1 14.2 235 20-279 111-367 (1039)
390 KOG1151 Tousled-like protein k 99.9 2.6E-25 5.6E-30 235.3 9.8 253 19-286 463-746 (775)
391 KOG1290 Serine/threonine prote 99.9 4.6E-24 1E-28 229.4 19.6 135 18-162 77-221 (590)
392 KOG0608 Warts/lats-like serine 99.9 1.7E-24 3.6E-29 237.5 14.7 246 21-287 631-934 (1034)
393 cd00180 PKc Catalytic domain o 99.9 5.8E-23 1.3E-27 205.1 22.6 210 27-280 1-214 (215)
394 PLN00113 leucine-rich repeat r 99.9 5.4E-24 1.2E-28 264.7 18.4 221 21-280 692-947 (968)
395 KOG0196 Tyrosine kinase, EPH ( 99.9 1.1E-24 2.4E-29 244.6 11.0 237 21-280 631-887 (996)
396 KOG0984 Mitogen-activated prot 99.9 4.5E-24 9.8E-29 207.3 12.4 201 22-242 49-253 (282)
397 KOG1152 Signal transduction se 99.9 1.4E-24 3.1E-29 236.8 8.8 195 20-241 562-769 (772)
398 KOG3653 Transforming growth fa 99.9 3.7E-24 7.9E-29 229.9 10.6 200 19-239 210-422 (534)
399 KOG0695 Serine/threonine prote 99.9 1.4E-23 3E-28 215.7 11.7 250 18-294 249-529 (593)
400 smart00221 STYKc Protein kinas 99.9 5.2E-22 1.1E-26 202.2 19.1 199 21-243 1-202 (225)
401 KOG0200 Fibroblast/platelet-de 99.9 6E-22 1.3E-26 232.8 17.3 236 21-279 298-574 (609)
402 KOG0576 Mitogen-activated prot 99.9 1.5E-23 3.3E-28 232.3 3.0 243 17-285 13-275 (829)
403 KOG1025 Epidermal growth facto 99.9 4.9E-22 1.1E-26 224.0 12.4 231 24-279 701-952 (1177)
404 PLN00181 protein SPA1-RELATED; 99.8 2.1E-21 4.5E-26 236.2 11.6 202 73-285 26-269 (793)
405 KOG1167 Serine/threonine prote 99.8 4.1E-21 8.9E-26 204.7 11.5 254 19-300 36-399 (418)
406 KOG1345 Serine/threonine kinas 99.8 1.3E-21 2.8E-26 197.1 6.0 225 20-271 25-275 (378)
407 KOG1024 Receptor-like protein 99.8 2.7E-19 5.9E-24 188.0 13.0 242 18-280 283-551 (563)
408 PRK09188 serine/threonine prot 99.8 1.2E-18 2.6E-23 191.1 14.1 168 17-211 16-196 (365)
409 KOG0590 Checkpoint kinase and 99.7 7E-19 1.5E-23 204.9 6.1 245 19-285 317-589 (601)
410 smart00750 KIND kinase non-cat 99.7 1.2E-17 2.6E-22 165.0 13.0 144 110-281 1-166 (176)
411 PF14531 Kinase-like: Kinase-l 99.7 2.4E-17 5.3E-22 173.8 12.6 240 20-271 13-288 (288)
412 COG0515 SPS1 Serine/threonine 99.7 4.8E-16 1E-20 164.3 22.5 243 21-280 2-275 (384)
413 KOG1165 Casein kinase (serine/ 99.7 1.4E-16 3E-21 165.1 15.0 205 16-243 25-238 (449)
414 KOG1164 Casein kinase (serine/ 99.7 7.1E-16 1.5E-20 168.3 20.9 203 20-242 19-238 (322)
415 cd05147 RIO1_euk RIO kinase fa 99.7 2.3E-16 5E-21 158.9 9.7 139 24-181 2-169 (190)
416 PRK10359 lipopolysaccharide co 99.7 2.8E-16 6E-21 161.2 10.1 178 17-235 29-216 (232)
417 cd05145 RIO1_like RIO kinase f 99.6 9.6E-16 2.1E-20 154.4 12.3 141 23-181 1-169 (190)
418 KOG1163 Casein kinase (serine/ 99.6 3.8E-15 8.2E-20 148.5 10.4 203 17-242 13-222 (341)
419 KOG4158 BRPK/PTEN-induced prot 99.6 1.2E-14 2.5E-19 153.8 12.4 192 77-275 274-505 (598)
420 PRK10345 hypothetical protein; 99.6 3E-14 6.5E-19 145.4 14.2 135 24-176 7-156 (210)
421 PRK12274 serine/threonine prot 99.6 2.6E-14 5.7E-19 143.9 12.6 191 20-241 3-207 (218)
422 smart00090 RIO RIO-like kinase 99.5 1.9E-14 4.2E-19 149.9 9.8 145 20-181 29-200 (237)
423 KOG1033 eIF-2alpha kinase PEK/ 99.5 9.1E-15 2E-19 160.9 4.8 167 100-276 329-508 (516)
424 KOG0603 Ribosomal protein S6 k 99.5 3E-15 6.6E-20 167.5 1.0 222 41-293 18-255 (612)
425 KOG0195 Integrin-linked kinase 99.5 3E-14 6.5E-19 144.0 6.6 225 22-278 193-440 (448)
426 cd05144 RIO2_C RIO kinase fami 99.4 4.2E-13 9E-18 135.9 11.4 137 20-181 16-177 (198)
427 KOG0606 Microtubule-associated 99.4 1.4E-13 3E-18 161.1 7.3 236 18-311 82-347 (1205)
428 PRK14879 serine/threonine prot 99.4 1.1E-12 2.4E-17 133.7 13.2 133 25-178 2-143 (211)
429 KOG1166 Mitotic checkpoint ser 99.4 7.1E-13 1.5E-17 158.2 13.2 192 18-240 697-902 (974)
430 KOG1023 Natriuretic peptide re 99.4 7.6E-13 1.6E-17 148.4 12.5 193 73-279 1-219 (484)
431 TIGR03724 arch_bud32 Kae1-asso 99.4 1.5E-12 3.3E-17 131.5 11.8 129 27-179 2-139 (199)
432 cd05119 RIO RIO kinase family, 99.3 4E-12 8.6E-17 127.0 11.2 138 23-181 1-166 (187)
433 PRK09605 bifunctional UGMP fam 99.3 6.7E-12 1.4E-16 146.4 13.8 134 21-179 335-477 (535)
434 PRK01723 3-deoxy-D-manno-octul 99.3 8.1E-12 1.7E-16 130.4 12.6 130 35-179 47-192 (239)
435 KOG0601 Cyclin-dependent kinas 99.2 2.5E-11 5.5E-16 136.3 8.1 241 20-280 115-379 (524)
436 cd05120 APH_ChoK_like Aminogly 99.2 9.6E-11 2.1E-15 111.1 11.0 130 23-178 2-138 (155)
437 KOG0590 Checkpoint kinase and 99.2 5.1E-12 1.1E-16 147.7 0.7 246 17-284 18-290 (601)
438 KOG1266 Protein kinase [Signal 99.0 3.8E-11 8.3E-16 125.0 0.3 205 66-285 114-336 (458)
439 cd05146 RIO3_euk RIO kinase fa 99.0 1.9E-09 4.1E-14 108.5 11.6 136 25-180 3-175 (197)
440 TIGR01982 UbiB 2-polyprenylphe 99.0 3E-09 6.6E-14 120.6 12.2 140 25-180 123-308 (437)
441 PRK04750 ubiB putative ubiquin 98.9 1.5E-09 3.2E-14 124.9 7.3 142 21-180 122-315 (537)
442 cd05151 ChoK Choline Kinase (C 98.8 8.6E-09 1.9E-13 101.0 9.1 124 25-178 4-136 (170)
443 KOG0601 Cyclin-dependent kinas 98.7 6.1E-09 1.3E-13 117.3 4.2 235 17-281 263-515 (524)
444 KOG3741 Poly(A) ribonuclease s 98.7 2.6E-07 5.6E-12 102.3 15.4 209 35-280 291-521 (655)
445 PF01163 RIO1: RIO1 family; I 98.7 1.3E-07 2.9E-12 94.7 12.0 126 35-180 1-157 (188)
446 KOG0606 Microtubule-associated 98.5 7.1E-08 1.5E-12 114.1 3.8 248 21-289 806-1100(1205)
447 COG3642 Mn2+-dependent serine/ 98.5 1.8E-06 3.9E-11 84.8 12.0 127 26-178 3-140 (204)
448 PF06293 Kdo: Lipopolysacchari 98.5 1.1E-06 2.5E-11 89.6 11.3 140 32-179 19-171 (206)
449 KOG0211 Protein phosphatase 2A 98.4 1.4E-06 3.1E-11 102.9 13.5 190 314-506 423-619 (759)
450 KOG3087 Serine/threonine prote 98.4 2.8E-06 6.1E-11 83.1 11.8 142 23-178 11-165 (229)
451 COG0478 RIO-like serine/threon 98.4 2.5E-06 5.3E-11 88.5 11.7 136 21-180 93-253 (304)
452 cd05154 ACAD10_11_like Acyl-Co 98.4 8.4E-07 1.8E-11 90.5 8.3 76 25-109 4-82 (223)
453 PRK15123 lipopolysaccharide co 98.3 6.5E-06 1.4E-10 87.3 12.1 136 35-178 37-194 (268)
454 KOG1243 Protein kinase [Genera 98.2 3.3E-06 7.2E-11 96.6 9.5 181 325-506 327-509 (690)
455 COG4248 Uncharacterized protei 98.2 3.3E-05 7.2E-10 84.0 14.8 236 20-275 12-291 (637)
456 KOG0211 Protein phosphatase 2A 98.2 2.5E-05 5.5E-10 92.6 15.1 187 319-506 470-658 (759)
457 KOG2137 Protein kinase [Signal 98.2 8.1E-06 1.8E-10 93.8 10.6 170 319-488 340-514 (700)
458 PRK09902 hypothetical protein; 98.1 4.1E-05 8.9E-10 77.7 12.8 137 35-179 33-180 (216)
459 COG1718 RIO1 Serine/threonine 97.9 3.8E-05 8.2E-10 79.1 9.4 128 35-180 63-217 (268)
460 COG0661 AarF Predicted unusual 97.7 0.00015 3.2E-09 83.5 9.9 140 25-181 131-317 (517)
461 KOG1235 Predicted unusual prot 97.7 0.00019 4E-09 82.5 10.1 136 26-181 168-357 (538)
462 KOG1240 Protein kinase contain 97.6 0.00037 8E-09 83.7 11.6 252 256-508 423-743 (1431)
463 PRK09687 putative lyase; Provi 97.6 0.00062 1.4E-08 72.8 12.0 129 364-506 53-182 (280)
464 PRK09687 putative lyase; Provi 97.5 0.00098 2.1E-08 71.3 12.2 127 363-506 88-215 (280)
465 PF06176 WaaY: Lipopolysacchar 97.5 0.00068 1.5E-08 69.2 10.2 144 18-178 30-183 (229)
466 PTZ00429 beta-adaptin; Provisi 97.5 0.00098 2.1E-08 80.0 13.2 135 365-506 68-202 (746)
467 PF12717 Cnd1: non-SMC mitotic 97.5 0.00064 1.4E-08 67.8 9.9 148 378-532 1-159 (178)
468 PF12348 CLASP_N: CLASP N term 97.5 0.0023 4.9E-08 66.2 14.3 150 368-535 56-215 (228)
469 PF01602 Adaptin_N: Adaptin N 97.3 0.0016 3.5E-08 75.9 12.8 134 365-506 42-175 (526)
470 KOG2270 Serine/threonine prote 97.3 0.00084 1.8E-08 72.6 9.2 138 24-179 149-314 (520)
471 TIGR02172 Fb_sc_TIGR02172 Fibr 97.2 0.0017 3.6E-08 67.4 10.0 134 25-177 7-181 (226)
472 PF12755 Vac14_Fab1_bd: Vacuol 97.0 0.0014 3.1E-08 58.3 6.3 67 358-424 20-88 (97)
473 PF12348 CLASP_N: CLASP N term 97.0 0.0034 7.3E-08 64.9 10.1 117 359-478 88-212 (228)
474 cd05150 APH Aminoglycoside 3'- 97.0 0.0064 1.4E-07 63.4 12.1 137 26-177 5-192 (244)
475 PRK13800 putative oxidoreducta 96.8 0.013 2.9E-07 72.8 14.8 53 369-430 688-740 (897)
476 PRK13800 putative oxidoreducta 96.8 0.0076 1.7E-07 74.9 11.9 134 366-524 622-769 (897)
477 PF01636 APH: Phosphotransfera 96.8 0.0085 1.8E-07 61.1 10.4 139 26-177 4-196 (239)
478 cd00020 ARM Armadillo/beta-cat 96.7 0.0075 1.6E-07 54.8 8.4 108 364-471 6-119 (120)
479 KOG1820 Microtubule-associated 96.6 0.02 4.2E-07 69.1 13.3 189 296-488 260-459 (815)
480 KOG1035 eIF-2alpha kinase GCN2 96.5 0.0068 1.5E-07 74.0 8.1 200 63-281 226-435 (1351)
481 COG2112 Predicted Ser/Thr prot 96.4 0.016 3.4E-07 57.1 8.9 124 24-179 27-156 (201)
482 PRK09550 mtnK methylthioribose 96.3 0.038 8.2E-07 62.0 12.3 75 25-111 32-115 (401)
483 cd05155 APH_ChoK_like_1 Unchar 96.3 0.026 5.6E-07 58.6 10.2 30 148-177 164-193 (235)
484 PF02985 HEAT: HEAT repeat; I 96.2 0.0037 7.9E-08 43.3 2.5 31 444-474 1-31 (31)
485 PF12755 Vac14_Fab1_bd: Vacuol 96.2 0.025 5.4E-07 50.4 8.5 67 400-466 23-91 (97)
486 PF12260 PIP49_C: Protein-kina 96.2 0.0074 1.6E-07 60.7 5.8 98 67-179 7-112 (188)
487 PF10508 Proteasom_PSMB: Prote 96.2 0.049 1.1E-06 63.3 13.3 154 352-506 64-225 (503)
488 PF13646 HEAT_2: HEAT repeats; 96.2 0.021 4.6E-07 49.2 7.9 86 367-468 1-88 (88)
489 COG5096 Vesicle coat complex, 96.2 0.027 5.9E-07 66.9 10.9 149 350-506 40-189 (757)
490 KOG2268 Serine/threonine prote 96.2 0.0044 9.5E-08 66.2 3.8 136 20-180 93-253 (465)
491 TIGR01767 MTRK 5-methylthiorib 96.2 0.031 6.8E-07 61.5 10.5 74 26-111 2-84 (370)
492 PRK12396 5-methylribose kinase 96.1 0.021 4.5E-07 63.7 9.1 75 24-110 34-116 (409)
493 cd05157 ETNK_euk Ethanolamine 96.1 0.04 8.7E-07 57.0 10.8 30 148-177 170-200 (235)
494 KOG1967 DNA repair/transcripti 96.1 0.018 3.8E-07 68.3 8.7 143 360-505 862-1017(1030)
495 PF01602 Adaptin_N: Adaptin N 96.1 0.056 1.2E-06 63.0 12.8 187 299-495 202-389 (526)
496 PTZ00429 beta-adaptin; Provisi 96.0 0.074 1.6E-06 64.2 13.9 169 296-473 39-209 (746)
497 KOG1820 Microtubule-associated 96.0 0.064 1.4E-06 64.8 13.3 208 317-531 242-460 (815)
498 cd00020 ARM Armadillo/beta-cat 95.9 0.012 2.6E-07 53.4 5.1 103 400-503 3-111 (120)
499 KOG0213 Splicing factor 3b, su 95.9 0.021 4.6E-07 66.0 7.9 190 308-506 382-576 (1172)
500 PF10707 YrbL-PhoP_reg: PhoP r 95.9 0.082 1.8E-06 53.7 11.4 119 25-165 7-154 (199)
No 1
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=100.00 E-value=7.2e-97 Score=819.94 Aligned_cols=519 Identities=46% Similarity=0.754 Sum_probs=461.8
Q ss_pred CCCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 15 GVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 15 ~~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
...+|+|+| +...-++ ++|. .|+.|.++.+|+||+++.++. .....++++++.||+||||||++|++.++.+.
T Consensus 9 ~~~~fpY~l-e~~~~~~~a~~~--~~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~- 82 (690)
T KOG1243|consen 9 SSSQFPYDL-EETAFSSEALWP--DGTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEEEG- 82 (690)
T ss_pred ccccCCccc-ccccCCCccccc--ccceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcccC-
Confidence 347999999 4444333 5554 799999999999999997655 56778999999999999999999999999853
Q ss_pred CcCCcccEEEEEecCCcchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 94 DATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
++|||||+|.||..++++.+ ..++.||++||+.||.|||++|+++||||+.++|||++.|+|||+||
T Consensus 83 -------~~ylvTErV~Pl~~~lk~l~------~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggl 149 (690)
T KOG1243|consen 83 -------TLYLVTERVRPLETVLKELG------KEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGL 149 (690)
T ss_pred -------ceEEEeeccccHHHHHHHhH------HHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeee
Confidence 89999999999999999875 66799999999999999999999999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhccCCCC
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIP 253 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~~~IP 253 (771)
++++...+.+. ..++.+.. ..|..|+.+.. ..+..|+|.|||+++|+|+| .+-...++.....||
T Consensus 150 e~v~~~~~~~~-----~~~~~~~~-~s~~~P~~~~~--------s~~s~D~~~Lg~li~el~ng-~~~~~~~~~~~~~ip 214 (690)
T KOG1243|consen 150 ELVSKASGFNA-----PAKSLYLI-ESFDDPEEIDP--------SEWSIDSWGLGCLIEELFNG-SLLTKTDLSNTGKIP 214 (690)
T ss_pred EEEeccccCCc-----ccccchhh-hcccChhhcCc--------cccchhhhhHHHHHHHHhCc-ccCcchhhhccCccc
Confidence 99988776432 11111122 14566665432 22679999999999999999 556677888899999
Q ss_pred cchHHHHHHHhccCCCCCCChHHHhhC----CCCCcchhhhhhhhhhhhccCChhhHHhhhhhchhhhcCCChhhhhhhh
Q 004157 254 KSLLPDYQRLLSSMPSRRLNSSKLIEN----SEYFQNKLVDTIHFMEILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKL 329 (771)
Q Consensus 254 ~~l~~~i~~lL~~~P~~Rps~~~lL~~----~~fF~n~lv~~~~~L~~l~~k~~~eK~~F~~~L~~~l~~fP~~~~~~kI 329 (771)
+.....+++.+-..+..|++...++.. ++||+|.++.++.||+++.+|+.+||..||++|.+.++.||++++++||
T Consensus 215 k~~~~~~~k~~~~~~~~r~n~~~~~~~~~~~~gff~n~fvd~~~fLeel~lks~~eK~~Ff~~L~~~l~~~pe~i~~~kv 294 (690)
T KOG1243|consen 215 KALIELYCKKLGATELKRPNKLRFILECRLLGGFFRNDFVDTLLFLEELRLKSVEEKQKFFSGLIDRLDNFPEEIIASKV 294 (690)
T ss_pred hhHHHHHHHHhccccccccchhhHHHHHHhccccccchHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 999999999888999999997766553 5899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHH
Q 004157 330 LPLLASALEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHV 409 (771)
Q Consensus 330 LP~Ll~~~~~~~~~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l 409 (771)
+|.|+..++++.+...+|.|+|++++.++.++|++.|.|+|++||+++||+||+.||+|++.|+++|++++++++|||+|
T Consensus 295 lp~Ll~~~~~g~a~~~~ltpl~k~~k~ld~~eyq~~i~p~l~kLF~~~Dr~iR~~LL~~i~~~i~~Lt~~~~~d~I~phv 374 (690)
T KOG1243|consen 295 LPILLAALEFGDAASDFLTPLFKLGKDLDEEEYQVRIIPVLLKLFKSPDRQIRLLLLQYIEKYIDHLTKQILNDQIFPHV 374 (690)
T ss_pred HHHHHHHhhccccchhhhhHHHHhhhhccccccccchhhhHHHHhcCcchHHHHHHHHhHHHHhhhcCHHhhcchhHHHH
Confidence 99999999999989999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHH
Q 004157 410 ATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTV 489 (771)
Q Consensus 410 ~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~ 489 (771)
..||.|+++.|||+|||+|+.++|||+++++|+||||+|+++|.|++++|||||+||||||++||....|+.||+.||+
T Consensus 375 ~~G~~DTn~~Lre~Tlksm~~La~kL~~~~Ln~Ellr~~ar~q~d~~~~irtntticlgki~~~l~~~~R~~vL~~aft- 453 (690)
T KOG1243|consen 375 ALGFLDTNATLREQTLKSMAVLAPKLSKRNLNGELLRYLARLQPDEHGGIRTNTTICLGKIAPHLAASVRKRVLASAFT- 453 (690)
T ss_pred HhhcccCCHHHHHHHHHHHHHHHhhhchhhhcHHHHHHHHhhCccccCcccccceeeecccccccchhhhccccchhhh-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcchhhheeee-----cc--------------------CCHHHHHHHHHHHHHHHHHHHHHH-hhcCCCCCCCC
Q 004157 490 RALRDTFSPARGAAKIL-----SY--------------------LNCDVRSKAFQAVDQFLQIVKQYH-EKTNTGDATGA 543 (771)
Q Consensus 490 ~~lkD~f~~~R~a~l~a-----~~--------------------~~~~VR~~a~~~~~~~l~~l~~~~-~~~~~~~~~~~ 543 (771)
|+|||||+|+|.|++.+ +| +++.||++||++++.|++++|+.+ +.+..+..+++
T Consensus 454 ralkdpf~paR~a~v~~l~at~~~~~~~~va~kIlp~l~pl~vd~e~~vr~~a~~~i~~fl~kl~~~~~~~~~~ge~~~s 533 (690)
T KOG1243|consen 454 RALKDPFVPARKAGVLALAATQEYFDQSEVANKILPSLVPLTVDPEKTVRDTAEKAIRQFLEKLEKVSPESTEAGEKAAS 533 (690)
T ss_pred hhhcCCCCCchhhhhHHHhhcccccchhhhhhhccccccccccCcccchhhHHHHHHHHHHhhhhhhccccccccceecc
Confidence 99999999999999999 33 899999999999999999999996 44544443321
Q ss_pred CccCCCCCCCcchhHHHHHHhhccCCCC
Q 004157 544 SSVGISSMPGNASLLGWAMSSLTLKGKP 571 (771)
Q Consensus 544 ~~~~~~~~~~~~~~~~wa~~~~~~~~~~ 571 (771)
+....++...|+||++++++.||++
T Consensus 534 ---~~~~~~~~~~~a~Wa~t~~s~~f~~ 558 (690)
T KOG1243|consen 534 ---PVKNHPAEPVWAGWALTSLSAKFKP 558 (690)
T ss_pred ---ccccCCccccccccchhhhhccccC
Confidence 1111234456999999999999998
No 2
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-43 Score=394.77 Aligned_cols=431 Identities=21% Similarity=0.335 Sum_probs=355.2
Q ss_pred CCCCCceecCCCCCCC--CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 16 VKDLPYNIGDPYPSAW--GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~--g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
...-.|++.+.++..+ +.|.+|.|+.+..+.+.-.+..- +..+++...-+.+||| .+
T Consensus 34 ~~~~~~~~~~~~~~~g~g~~~~ly~~~~~~sk~~~~~~s~~--------~~~ld~~~~~~~~lr~------~~------- 92 (700)
T KOG2137|consen 34 KESQSYRSLNQVGSAGPGDAWKLYAGKKSGSKAPTLKKSAV--------VWMLDKRASSLQQLRG------LD------- 92 (700)
T ss_pred ccccccccccceeecCCCchhhhhhhhccCccCccccceee--------eeecChhhhHHHHHhc------cc-------
Confidence 3445788888887755 78999999988776655211111 1112223344556666 11
Q ss_pred CcCCcccEEEEEecCCcchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 94 DATSTKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.+...||-. -..+.+++.||.|+|+++++||+||.|++|+++..|.|||+||
T Consensus 93 -------~vs~aTe~~---------------------f~nl~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf 144 (700)
T KOG2137|consen 93 -------GVSKATEDG---------------------FANLGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGF 144 (700)
T ss_pred -------chhhcccHh---------------------hhhhhcccchhhhhccCcceeecccchhheeeccCcceeeccc
Confidence 233344422 1114566689999999999999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccC------CCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCC-CCCChh--
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVG------AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSKTE-- 244 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~------~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~-~p~~~~-- 244 (771)
+++....+... .++..|....+ ..|.+||++.+ ...+.++|+|||||+||.+++|+ .++...
T Consensus 145 ~f~v~~~~~~~---~p~~~yd~~lp~~~~~~~~f~apE~~~~------~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~ 215 (700)
T KOG2137|consen 145 SFCVNANGPTE---YPFSEYDPPLPLLLQPHLNFLAPEYLLG------TTNTPASDVFSLGVLIYTIYNGGKSIIAANGG 215 (700)
T ss_pred hhhhccCCCCc---cccccCCCCCChhhccCcccccchhhcc------ccccccccceeeeeEEEEEecCCcchhhccCC
Confidence 99987665322 22333322222 27999999887 35668999999999999999654 333211
Q ss_pred --------------hhhccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhhhhhhhhhhhccCChhhHHhhh
Q 004157 245 --------------ELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNLKDSVEKDTFF 310 (771)
Q Consensus 245 --------------~l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv~~~~~L~~l~~k~~~eK~~F~ 310 (771)
....-.+||.++.+.++++++.++..||++..++. .+||++..+.+++||+.+..|++.||.+|+
T Consensus 216 ~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~-~~ff~D~~~~aLrfLD~l~~kdn~qKs~Fl 294 (700)
T KOG2137|consen 216 LLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLS-IPFFSDPGLKALRFLDDLPQKDNSQKSSFL 294 (700)
T ss_pred cchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhhc-ccccCCchhhhhhhcccccccCcHHHHHHH
Confidence 00112579999999999999999999997766554 599999999999999999999999999999
Q ss_pred hhchhhhcCCChhhhhhhhHHHHHHHHhcCCCCchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCcH-HHHHHHHHhH
Q 004157 311 RKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDR-AIRVALLQHI 389 (771)
Q Consensus 311 ~~L~~~l~~fP~~~~~~kILP~Ll~~~~~~~~~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~Dr-~iR~~LL~~l 389 (771)
+.|.++++.||.++..+||||.|++++......+.+|+.++.|++.++..+|..+++|.|.++|..++. ++++++++|+
T Consensus 295 k~Ls~~ip~fp~rv~~~kiLP~L~~el~n~~~vp~~LP~v~~i~~~~s~~~~~~~~~p~l~pi~~~~~~~~~~l~i~e~m 374 (700)
T KOG2137|consen 295 KGLSKLIPTFPARVLFQKILPTLVAELVNTKMVPIVLPLVLLIAEGLSQNEFGPKMLPALKPIYSASDPKQALLFILENM 374 (700)
T ss_pred HHHHHhhccCCHHHHHHhhhhHHHHHhccccccccccchhhhhhhccchhhhhhhhhHHHHHHhccCCcccchhhHHhhH
Confidence 999999999999999999999999999988888889999999999999999999999999999997665 8999999999
Q ss_pred HHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccC-CCCcchhhHHHHHH
Q 004157 390 DQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVD-EEPAIRTNTTILLG 468 (771)
Q Consensus 390 ~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D-~~~~IRtnt~icl~ 468 (771)
+.+.++++++++.++|+|.|+..++|.+..|+|.+|+.++.++..|+...+++.|||.|..+... +...||+|++.||+
T Consensus 375 dlL~~Kt~~e~~~~~IlplL~~S~~~~~~~iQ~~~L~~lptv~e~iD~~~vk~~ilP~l~~l~~~tt~~~vkvn~L~c~~ 454 (700)
T KOG2137|consen 375 DLLKEKTPPEEVKEKILPLLYRSLEDSDVQIQELALQILPTVAESIDVPFVKQAILPRLKNLAFKTTNLYVKVNVLPCLA 454 (700)
T ss_pred HHHHhhCChHHHHHHHHHHHHHHhcCcchhhHHHHHHhhhHHHHhccHHHHHHHHHHHhhcchhcccchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999875 57999999999999
Q ss_pred HhhhccCcchhhHHhHHHHHHhh-hcCCCcchhhheeee
Q 004157 469 NIASHLNEGTRKRVLINAFTVRA-LRDTFSPARGAAKIL 506 (771)
Q Consensus 469 kia~~L~~~~~~~vL~~af~~~~-lkD~f~~~R~a~l~a 506 (771)
++++.|++.+....++|.+. .. .+||-+-.+...|+.
T Consensus 455 ~l~q~lD~~~v~d~~lpi~~-~~~~~dp~iv~~~~~i~~ 492 (700)
T KOG2137|consen 455 GLIQRLDKAAVLDELLPILK-CIKTRDPAIVMGFLRIYE 492 (700)
T ss_pred HHHHHHHHHHhHHHHHHHHH-HhcCCCcHHHHHHHHHHH
Confidence 99999999988888899988 55 889988888777766
No 3
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=7.9e-41 Score=339.61 Aligned_cols=242 Identities=20% Similarity=0.284 Sum_probs=201.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|+...++|+|+ | +||++++|++|+-||||+|..+..+....+.+.+|++.||+|+|||++.++++|..
T Consensus 3 kYE~LgkvGEGSYG--vV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr-------- 72 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYG--VVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR-------- 72 (396)
T ss_pred HHhhhhccccCcce--EEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh--------
Confidence 588888999998 9 99999999999999999998776666778889999999999999999999999976
Q ss_pred ccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
+..+|+|+|||. .+.+.|.+.... ...+.++.+++|++.|+.|||. +++|||||||+||+|+.+|.+|||||||++
T Consensus 73 krklhLVFE~~dhTvL~eLe~~p~G--~~~~~vk~~l~Q~l~ai~~cHk-~n~IHRDIKPENILit~~gvvKLCDFGFAR 149 (396)
T KOG0593|consen 73 KRKLHLVFEYCDHTVLHELERYPNG--VPSELVKKYLYQLLKAIHFCHK-NNCIHRDIKPENILITQNGVVKLCDFGFAR 149 (396)
T ss_pred cceeEEEeeecchHHHHHHHhccCC--CCHHHHHHHHHHHHHHhhhhhh-cCeecccCChhheEEecCCcEEeccchhhH
Confidence 458999999994 555556654422 3345577889999999999996 899999999999999999999999999999
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-hhc--------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-LRN-------- 248 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-l~~-------- 248 (771)
.+...+. + ...++.+..|+|||++.++ ..|+..+|||++||++.||++|.++|.... +.+
T Consensus 150 ~L~~pgd-----~-YTDYVATRWYRaPELLvGD-----tqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktL 218 (396)
T KOG0593|consen 150 TLSAPGD-----N-YTDYVATRWYRAPELLVGD-----TQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTL 218 (396)
T ss_pred hhcCCcc-----h-hhhhhhhhhccChhhhccc-----CcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHH
Confidence 8875321 1 2345777899999999986 578899999999999999999999885421 100
Q ss_pred ----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 249 ----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 ----------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
...+...+.++++.||..||.+|++.++++.| +||++
T Consensus 219 G~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H-~yFd~ 289 (396)
T KOG0593|consen 219 GNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH-PYFDG 289 (396)
T ss_pred cccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC-hHHHH
Confidence 01233347788999999999999999999988 78843
No 4
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.1e-40 Score=361.42 Aligned_cols=245 Identities=20% Similarity=0.341 Sum_probs=206.9
Q ss_pred CCCCceecCCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
.+-+|+.++.+|.|+ .-++|.+++..+|+.||+|++.++.. +....+.+.+||++.+.|+|||||+++++||+.
T Consensus 16 ~~~~Y~~g~~LGkGg-FA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs---- 90 (592)
T KOG0575|consen 16 RSKRYKRGRFLGKGG-FARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDS---- 90 (592)
T ss_pred CcceeeeeeeeccCc-ceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecC----
Confidence 346799999999996 33999999999999999999997533 235577889999999999999999999999974
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
+++|||.|+| ++|..+++++....+.. ..++++||+.||.|||+ .+|+|||||..|+|++++-++|||||
T Consensus 91 ----~nVYivLELC~~~sL~el~Krrk~ltEpE---ary~l~QIv~GlkYLH~-~~IiHRDLKLGNlfL~~~~~VKIgDF 162 (592)
T KOG0575|consen 91 ----NNVYIVLELCHRGSLMELLKRRKPLTEPE---ARYFLRQIVEGLKYLHS-LGIIHRDLKLGNLFLNENMNVKIGDF 162 (592)
T ss_pred ----CceEEEEEecCCccHHHHHHhcCCCCcHH---HHHHHHHHHHHHHHHHh-cCceecccchhheeecCcCcEEeccc
Confidence 5999999999 68999998765443333 45569999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc----
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT---- 249 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~---- 249 (771)
|++......++ ...+.++++.|.|||++.. .+.++.+||||+||+||.|+.|.|||+...++.+
T Consensus 163 GLAt~le~~~E------rk~TlCGTPNYIAPEVl~k------~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~I 230 (592)
T KOG0575|consen 163 GLATQLEYDGE------RKKTLCGTPNYIAPEVLNK------SGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKI 230 (592)
T ss_pred ceeeeecCccc------ccceecCCCcccChhHhcc------CCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHH
Confidence 99999875432 1344566779999999985 5788999999999999999999999998765543
Q ss_pred ----C----CCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcch
Q 004157 250 ----A----SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNK 287 (771)
Q Consensus 250 ----~----~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~ 287 (771)
+ .+.....++|.+||+.+|.+||+++++|.| .||.+-
T Consensus 231 k~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h-~Ff~~g 275 (592)
T KOG0575|consen 231 KLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH-PFFKSG 275 (592)
T ss_pred HhcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC-HhhhCC
Confidence 3 344557789999999999999999999998 677443
No 5
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.2e-40 Score=345.42 Aligned_cols=245 Identities=20% Similarity=0.254 Sum_probs=198.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-----hHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-----GHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-----~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
-|.+.+.+|+|+ | .|-.|..+.+|+.||||++++..... ......++|+++|++|.||||++++++|+.++
T Consensus 173 ~yii~~~LGsGafg--~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d- 249 (475)
T KOG0615|consen 173 YYIISKTLGSGAFG--LVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD- 249 (475)
T ss_pred eeEeeeeecCCcee--EEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC-
Confidence 488999999998 8 99999999999999999999753222 11233679999999999999999999999753
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC---CcE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT---LDW 168 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~---G~~ 168 (771)
+.|||+||| |.|.+.+-.++...+... +.+++|++.||.|||+ .||+||||||+||+++.+ ..+
T Consensus 250 -------s~YmVlE~v~GGeLfd~vv~nk~l~ed~~---K~~f~Qll~avkYLH~-~GI~HRDiKPeNILl~~~~e~~ll 318 (475)
T KOG0615|consen 250 -------SSYMVLEYVEGGELFDKVVANKYLREDLG---KLLFKQLLTAVKYLHS-QGIIHRDIKPENILLSNDAEDCLL 318 (475)
T ss_pred -------ceEEEEEEecCccHHHHHHhccccccchh---HHHHHHHHHHHHHHHH-cCcccccCCcceEEeccCCcceEE
Confidence 789999999 579998888776554444 4449999999999996 999999999999999877 669
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh---
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--- 245 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~--- 245 (771)
||.|||++....... .....++++.|.|||++.+.-. ..++.++|+|||||++|-+++|.+||..+.
T Consensus 319 KItDFGlAK~~g~~s-------fm~TlCGTpsYvAPEVl~~kg~---~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~ 388 (475)
T KOG0615|consen 319 KITDFGLAKVSGEGS-------FMKTLCGTPSYVAPEVLASKGV---EYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP 388 (475)
T ss_pred Eecccchhhccccce-------ehhhhcCCccccChhheecCCe---ecccchheeeeccceEEEEeccCCCcccccCCc
Confidence 999999998775421 1234566779999999976422 244568999999999999999999996432
Q ss_pred -h-hc------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchh
Q 004157 246 -L-RN------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKL 288 (771)
Q Consensus 246 -l-~~------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~l 288 (771)
+ .+ -..|..+..+++.+||..||+.||+++++|+|+||...+.
T Consensus 389 sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~ 445 (475)
T KOG0615|consen 389 SLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPC 445 (475)
T ss_pred cHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence 1 11 1357788999999999999999999999999966554443
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=336.26 Aligned_cols=235 Identities=20% Similarity=0.307 Sum_probs=196.6
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
-+|.+.++||.|. + +||+|+++.++..||||.+.++.......+.+..|+++|+.|+|||||.++|+++.+
T Consensus 10 ~~y~~~~~iG~Gsfa--vVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~------ 81 (429)
T KOG0595|consen 10 GDYELSREIGSGSFA--VVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDD------ 81 (429)
T ss_pred ccceehhhccCcceE--EEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC------
Confidence 4699999999998 8 999999999999999999998876666788899999999999999999999999974
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC------CcEE
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT------LDWK 169 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~------G~~K 169 (771)
+++|+||||| ++|..+|+.++.. .+..++..+.||+.||+|||+ ++||||||||+||+++.. -..|
T Consensus 82 --~~i~lVMEyC~gGDLs~yi~~~~~l---~e~t~r~Fm~QLA~alq~L~~-~~IiHRDLKPQNiLLs~~~~~~~~~~LK 155 (429)
T KOG0595|consen 82 --DFIYLVMEYCNGGDLSDYIRRRGRL---PEATARHFMQQLASALQFLHE-NNIIHRDLKPQNILLSTTARNDTSPVLK 155 (429)
T ss_pred --CeEEEEEEeCCCCCHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeeeccCCcceEEeccCCCCCCCceEE
Confidence 4999999999 6899999998643 344466669999999999996 999999999999999875 3489
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT 249 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~ 249 (771)
|+|||+++.+.... .....++.+-|||||++.. +.|..++|+||+|+++|++++|.+||......++
T Consensus 156 IADFGfAR~L~~~~-------~a~tlcGSplYMAPEV~~~------~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL 222 (429)
T KOG0595|consen 156 IADFGFARFLQPGS-------MAETLCGSPLYMAPEVIMS------QQYDAKADLWSIGTILYQCLTGKPPFDAETPKEL 222 (429)
T ss_pred ecccchhhhCCchh-------HHHHhhCCccccCHHHHHh------ccccchhhHHHHHHHHHHHHhCCCCccccCHHHH
Confidence 99999999887421 1222344568999999975 5788999999999999999999999985443221
Q ss_pred ---------------CCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 250 ---------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 250 ---------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..+...+.+++..+|..++..|....+++.|
T Consensus 223 ~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~ 268 (429)
T KOG0595|consen 223 LLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDH 268 (429)
T ss_pred HHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhh
Confidence 1223346677888999999999998887776
No 7
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=340.85 Aligned_cols=245 Identities=19% Similarity=0.248 Sum_probs=205.0
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d 94 (771)
...+|++.+++|.|+ | .||+|+.+++|+.||||.+.++...-+..-. .+|++.|++|. |||||++.+++.+.+
T Consensus 8 ~m~RY~~i~klGDGTfG--sV~la~~~~~~~~VAIK~MK~Kf~s~ee~~n-LREvksL~kln~hpniikL~Evi~d~~-- 82 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFG--SVYLAKSKETGELVAIKKMKKKFYSWEECMN-LREVKSLRKLNPHPNIIKLKEVIRDND-- 82 (538)
T ss_pred HHHHHHHHHHhcCCcce--eEEEeeecCCCceeeHHHHHhhhccHHHHHH-HHHHHHHHhcCCCCcchhhHHHhhccC--
Confidence 356899999999999 9 9999999999999999999877655433333 46999999999 999999999997632
Q ss_pred cCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.++||||||+ ..|+++++.++.. ..+..|.-+++||++||+|+|. .|+.||||||+||+|+....+||+||
T Consensus 83 -----~~L~fVfE~Md~NLYqLmK~R~r~--fse~~irnim~QilqGL~hiHk-~GfFHRDlKPENiLi~~~~~iKiaDF 154 (538)
T KOG0661|consen 83 -----RILYFVFEFMDCNLYQLMKDRNRL--FSESDIRNIMYQILQGLAHIHK-HGFFHRDLKPENILISGNDVIKIADF 154 (538)
T ss_pred -----ceEeeeHHhhhhhHHHHHhhcCCc--CCHHHHHHHHHHHHHHHHHHHh-cCcccccCChhheEecccceeEeccc
Confidence 3899999999 6899999988532 3455678889999999999996 99999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh----hhh--
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELR-- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~----~l~-- 247 (771)
|+|+.+.+.. |+. .++.+..|+|||++... ..|+.++|||++||+++|+++-+++|.+. ++-
T Consensus 155 GLARev~Skp-----PYT--eYVSTRWYRAPEvLLrs-----~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KI 222 (538)
T KOG0661|consen 155 GLAREVRSKP-----PYT--EYVSTRWYRAPEVLLRS-----GYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKI 222 (538)
T ss_pred ccccccccCC-----Ccc--hhhhcccccchHHhhhc-----cccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHH
Confidence 9999987632 433 34667799999999865 57889999999999999999999888532 110
Q ss_pred ------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcch
Q 004157 248 ------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNK 287 (771)
Q Consensus 248 ------------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~ 287 (771)
-+.+.+.+..+++.+||..||.+|||+.+.|+| +||+..
T Consensus 223 c~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~-pffq~~ 297 (538)
T KOG0661|consen 223 CEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH-PFFQVG 297 (538)
T ss_pred HHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC-cccccc
Confidence 012345678888999999999999999999998 788753
No 8
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-37 Score=324.31 Aligned_cols=235 Identities=17% Similarity=0.201 Sum_probs=197.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
..+....||.|. | +||++.++.+++-+|+|++... .+....+++.+|+++|+...||||++||+.|..+.
T Consensus 80 dle~~~~lG~G~gG--~V~kv~Hk~t~~i~AlK~I~~~-~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~------ 150 (364)
T KOG0581|consen 80 DLERLGVLGSGNGG--TVYKVRHKPTGKIYALKVILLN-IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG------ 150 (364)
T ss_pred HhhhhhhcccCCCc--EEEEEEEcCCCeEEEEEeeccc-CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC------
Confidence 455667899998 8 9999999999999999999543 44456778899999999999999999999999753
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..++|+|||| ++|..+++..+. ..+..+..+.++|++||.|||+..+||||||||+||+||..|++||||||.+
T Consensus 151 -~~isI~mEYMDgGSLd~~~k~~g~---i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS 226 (364)
T KOG0581|consen 151 -EEISICMEYMDGGSLDDILKRVGR---IPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVS 226 (364)
T ss_pred -ceEEeehhhcCCCCHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEecccccc
Confidence 1599999999 689999987643 3355677779999999999997689999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-----h----hh
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-----E----LR 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-----~----l~ 247 (771)
..+.++ ....++++..||+||.+.+ ..|+.++||||||+.|+|+..|+.|+... . +.
T Consensus 227 ~~lvnS--------~a~tfvGT~~YMsPERi~g------~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~ 292 (364)
T KOG0581|consen 227 GILVNS--------IANTFVGTSAYMSPERISG------ESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLC 292 (364)
T ss_pred HHhhhh--------hcccccccccccChhhhcC------CcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHH
Confidence 887653 2344566779999999998 47888999999999999999998776542 1 10
Q ss_pred -----ccCCC-----CcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 248 -----NTASI-----PKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 248 -----~~~~I-----P~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
....+ ++++..++..||.++|.+|+++.++++|+
T Consensus 293 ~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hp 336 (364)
T KOG0581|consen 293 AIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHP 336 (364)
T ss_pred HHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCH
Confidence 11334 44599999999999999999999999993
No 9
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=5.1e-38 Score=314.67 Aligned_cols=245 Identities=18% Similarity=0.271 Sum_probs=204.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|...+++|+|. | .||+|++..+|+.||||++...+..+..-..+.+|++.|+.|+||||+.++|+|-.
T Consensus 3 rY~~~~~lGEG~~g--vVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~-------- 72 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYG--VVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPH-------- 72 (318)
T ss_pred hhhhhhhhcCcceE--EEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccC--------
Confidence 688899999999 9 99999999999999999999887777777778899999999999999999999987
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
.+.+.||+||+ .+|...|+.....- ....|++++.++++||.|||. +.|+||||||.|++|+.+|.+||+|||+++
T Consensus 73 ~~~l~lVfEfm~tdLe~vIkd~~i~l--~pa~iK~y~~m~LkGl~y~H~-~~IlHRDlKPnNLLis~~g~lKiADFGLAr 149 (318)
T KOG0659|consen 73 KSNLSLVFEFMPTDLEVVIKDKNIIL--SPADIKSYMLMTLKGLAYCHS-KWILHRDLKPNNLLISSDGQLKIADFGLAR 149 (318)
T ss_pred CCceEEEEEeccccHHHHhccccccc--CHHHHHHHHHHHHHHHHHHHh-hhhhcccCCccceEEcCCCcEEeecccchh
Confidence 34899999999 68999998876432 234478889999999999996 899999999999999999999999999999
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-hhc--------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-LRN-------- 248 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-l~~-------- 248 (771)
.+...+.. ..+ .+.+..|+|||++.|. +.|+..+||||.||++.||+.+.|+|..+. +.+
T Consensus 150 ~f~~p~~~-----~~~-~V~TRWYRAPELLfGs-----r~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~L 218 (318)
T KOG0659|consen 150 FFGSPNRI-----QTH-QVVTRWYRAPELLFGS-----RQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRAL 218 (318)
T ss_pred ccCCCCcc-----ccc-ceeeeeccChHHhccc-----hhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHc
Confidence 88764321 122 2667799999999986 689999999999999999999998875321 110
Q ss_pred ----------c---------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchh
Q 004157 249 ----------T---------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKL 288 (771)
Q Consensus 249 ----------~---------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~l 288 (771)
+ ...+.+..+++.+|+..||.+|+++.|.|+|..|.+.+.
T Consensus 219 GTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~ 289 (318)
T KOG0659|consen 219 GTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPL 289 (318)
T ss_pred CCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCC
Confidence 0 112345778899999999999999999999944434444
No 10
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.4e-38 Score=342.62 Aligned_cols=240 Identities=22% Similarity=0.335 Sum_probs=205.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|-+.+.||+|. | .||+|++|.+.+.||||.+++....+..+..+++|+++++.|+||||+.++++||+.
T Consensus 2 e~yhv~e~iG~Gsfg--~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~------ 73 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFG--RVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETS------ 73 (808)
T ss_pred cchhHHHHhcCCccc--eeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhccc------
Confidence 3588899999999 8 999999999999999999999887777889999999999999999999999999984
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
.++|+||||| ++|..+|...+...+ +.+..+.+|++.||.|||+ .+|+|||+||.||++...|.+||||||++
T Consensus 74 --~~~~vVte~a~g~L~~il~~d~~lpE---e~v~~~a~~LVsaL~yLhs-~rilhrd~kPqniLl~~~~~~KlcdFg~A 147 (808)
T KOG0597|consen 74 --AHLWVVTEYAVGDLFTILEQDGKLPE---EQVRAIAYDLVSALYYLHS-NRILHRDMKPQNILLEKGGTLKLCDFGLA 147 (808)
T ss_pred --ceEEEEehhhhhhHHHHHHhccCCCH---HHHHHHHHHHHHHHHHHHh-cCcccccCCcceeeecCCCceeechhhhh
Confidence 5999999999 789999988765443 3455559999999999996 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc--------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~-------- 248 (771)
+.+.... .+ ...-.+++.|||||+..+ +.|+..+|+|||||++||++.|+|||-...+.+
T Consensus 148 r~m~~~t-----~v-ltsikGtPlYmAPElv~e------~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d 215 (808)
T KOG0597|consen 148 RAMSTNT-----SV-LTSIKGTPLYMAPELVEE------QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKD 215 (808)
T ss_pred hhcccCc-----ee-eeeccCcccccCHHHHcC------CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcC
Confidence 9876521 11 112234558999999986 588899999999999999999999997654322
Q ss_pred ----cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 249 ----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 249 ----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
...+...+.++++.||.+||.+|++..+++.| +|+.
T Consensus 216 ~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H-pF~k 255 (808)
T KOG0597|consen 216 PVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH-PFWK 255 (808)
T ss_pred CCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcC-hHHh
Confidence 23455678899999999999999999999998 4443
No 11
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-37 Score=335.50 Aligned_cols=244 Identities=22% Similarity=0.352 Sum_probs=206.0
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|+..++||+|+ | .||+|++..+|+-||+|++...+.++.....+.+||++|++|.||||+++.+.+....
T Consensus 117 ~~feki~kIGeGTyg--~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~----- 189 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYG--QVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKL----- 189 (560)
T ss_pred HHHHHHHHhcCcchh--heeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecC-----
Confidence 3699999999999 9 9999999999999999999988877777888889999999999999999999987653
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...+|+|+||+ .+|.-++...... .....|+.++.||+.||.|||. .|++|||||.+|||||.+|..||+|||++
T Consensus 190 -~~siYlVFeYMdhDL~GLl~~p~vk--ft~~qIKc~mkQLl~Gl~~cH~-~gvlHRDIK~SNiLidn~G~LKiaDFGLA 265 (560)
T KOG0600|consen 190 -SGSIYLVFEYMDHDLSGLLSSPGVK--FTEPQIKCYMKQLLEGLEYCHS-RGVLHRDIKGSNILIDNNGVLKIADFGLA 265 (560)
T ss_pred -CceEEEEEecccchhhhhhcCCCcc--cChHHHHHHHHHHHHHHHHHhh-cCeeeccccccceEEcCCCCEEeccccce
Confidence 34899999999 5888887765322 1233477789999999999996 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh----hhhc----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRN---- 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~----~l~~---- 248 (771)
+.+...... + ....+++..|+|||++.+. ..|+.++|+||.|||+.|||.|+++++.. ++..
T Consensus 266 r~y~~~~~~---~--~T~rVvTLWYRpPELLLG~-----t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfkl 335 (560)
T KOG0600|consen 266 RFYTPSGSA---P--YTSRVVTLWYRPPELLLGA-----TSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKL 335 (560)
T ss_pred eeccCCCCc---c--cccceEEeeccChHHhcCC-----cccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHH
Confidence 987664321 1 2345677899999999987 68999999999999999999999987542 1110
Q ss_pred ---------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 249 ---------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 249 ---------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
...+|....+++..||..||.+|.|+.+.|++ +||
T Consensus 336 cGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s-eyF 403 (560)
T KOG0600|consen 336 CGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS-EYF 403 (560)
T ss_pred hCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC-ccc
Confidence 13456778889999999999999999999987 666
No 12
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=324.42 Aligned_cols=246 Identities=20% Similarity=0.329 Sum_probs=201.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|...+.||.|. | .|..++++.+|+.||||++..........++..+|++.|+.++|+||+.++|.+.....+ .
T Consensus 23 ~y~~~~~iG~GAyG--vVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~---~ 97 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYG--VVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRD---K 97 (359)
T ss_pred eecccccccCccee--eEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccc---c
Confidence 466678999999 8 899999999999999999985555556678888999999999999999999999762221 1
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
-+.+|+|+|++ .+|...|+.... ...+.+++.+|||++||+|+|+ ++++||||||.|+++|.+++.|+||||+++
T Consensus 98 f~DvYiV~elMetDL~~iik~~~~---L~d~H~q~f~YQiLrgLKyiHS-AnViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 98 FNDVYLVFELMETDLHQIIKSQQD---LTDDHAQYFLYQILRGLKYIHS-ANVIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred cceeEEehhHHhhHHHHHHHcCcc---ccHHHHHHHHHHHHHhcchhhc-ccccccccchhheeeccCCCEEecccccee
Confidence 45899999999 579999988763 2345577789999999999997 999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----h-------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L------- 246 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l------- 246 (771)
..... ...+ ...+++.+..|+|||++... ..|+.++||||.||++.||++|+++|...+ +
T Consensus 174 ~~~~~--~~~~--~mTeYVaTRWYRAPElll~~-----~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~l 244 (359)
T KOG0660|consen 174 YLDKF--FEDG--FMTEYVATRWYRAPELLLNS-----SEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELL 244 (359)
T ss_pred ecccc--Cccc--chhcceeeeeecCHHHHhcc-----ccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhc
Confidence 88653 1111 12456778899999999764 688999999999999999999999885421 1
Q ss_pred --------------------hcc------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 247 --------------------RNT------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 247 --------------------~~~------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
++. .+......+++++||..||.+|+|+++.|.| +|+
T Consensus 245 GtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h-PYl 313 (359)
T KOG0660|consen 245 GTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH-PYL 313 (359)
T ss_pred CCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC-hhh
Confidence 111 2333457888999999999999999999999 444
No 13
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.1e-37 Score=317.24 Aligned_cols=264 Identities=18% Similarity=0.268 Sum_probs=214.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|+...+|++|+ | .||+|+++.+++-||+|.+..+...+..--...+||.+|.+++||||+.+-+++.-.+
T Consensus 77 efe~lnrI~EGtyG--iVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~------ 148 (419)
T KOG0663|consen 77 EFEKLNRIEEGTYG--VVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN------ 148 (419)
T ss_pred HHHHHhhcccCcce--eEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc------
Confidence 589999999999 9 9999999999999999999987777666566778999999999999999999998655
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
-+.+||||||| .+|..+|...+. ......++..+.|+++||+|||. +.|+|||||++|++++..|.+|++|||+++
T Consensus 149 ~d~iy~VMe~~EhDLksl~d~m~q--~F~~~evK~L~~QlL~glk~lH~-~wilHRDLK~SNLLm~~~G~lKiaDFGLAR 225 (419)
T KOG0663|consen 149 MDKIYIVMEYVEHDLKSLMETMKQ--PFLPGEVKTLMLQLLRGLKHLHD-NWILHRDLKTSNLLLSHKGILKIADFGLAR 225 (419)
T ss_pred cceeeeeHHHHHhhHHHHHHhccC--CCchHHHHHHHHHHHHHHHHHhh-ceeEecccchhheeeccCCcEEecccchhh
Confidence 34899999999 589988887651 12233456669999999999995 999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCccccc-cccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh----hhhcc---
Q 004157 178 EFDGNNEAANGPMLQYA-WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRNT--- 249 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~-~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~----~l~~~--- 249 (771)
.+.+ |...+. -+++..|+|||++.+. ..|+.++||||+||++.|++.+.|+|... ++..+
T Consensus 226 ~ygs-------p~k~~T~lVVTLWYRaPELLLG~-----~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~l 293 (419)
T KOG0663|consen 226 EYGS-------PLKPYTPLVVTLWYRAPELLLGA-----KTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKL 293 (419)
T ss_pred hhcC-------CcccCcceEEEeeecCHHHhcCC-----cccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHH
Confidence 9876 333333 3566799999999986 68899999999999999999999987532 11000
Q ss_pred -------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhhhhh
Q 004157 250 -------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTI 292 (771)
Q Consensus 250 -------------------------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv~~~ 292 (771)
..+...-.+++..||..||.+|.|+.+.|+|.+|-..++...-
T Consensus 294 lGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P 373 (419)
T KOG0663|consen 294 LGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDP 373 (419)
T ss_pred hCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCCh
Confidence 1133556788999999999999999999999544456666666
Q ss_pred hhhhhhccCChhhH
Q 004157 293 HFMEILNLKDSVEK 306 (771)
Q Consensus 293 ~~L~~l~~k~~~eK 306 (771)
.++-.++.|...++
T Consensus 374 ~~~Pt~P~k~~~~~ 387 (419)
T KOG0663|consen 374 SMFPTWPAKSEQQR 387 (419)
T ss_pred hhcCCCcccccccc
Confidence 66666666654443
No 14
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-37 Score=330.93 Aligned_cols=250 Identities=18% Similarity=0.297 Sum_probs=204.4
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~ 95 (771)
.+|.+|+.+|.|. + +|++|+.+.++..||||+++++-- ++...+.+..|-..|.+| .||+|++++..|.++.
T Consensus 73 ~DF~Fg~~lGeGSYS--tV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~--- 147 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYS--TVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE--- 147 (604)
T ss_pred hhcchhheeccccce--eEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc---
Confidence 4699999999998 7 999999999999999999997532 223345667788888888 7999999999999854
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.+|+|+||+ |+|.++|++.+... +...+++..||+.||+|||+ +|||||||||+||+++.+|.+||.||
T Consensus 148 -----sLYFvLe~A~nGdll~~i~K~Gsfd---e~caR~YAAeIldAleylH~-~GIIHRDlKPENILLd~dmhikITDF 218 (604)
T KOG0592|consen 148 -----SLYFVLEYAPNGDLLDLIKKYGSFD---ETCARFYAAEILDALEYLHS-NGIIHRDLKPENILLDKDGHIKITDF 218 (604)
T ss_pred -----ceEEEEEecCCCcHHHHHHHhCcch---HHHHHHHHHHHHHHHHHHHh-cCceeccCChhheeEcCCCcEEEeec
Confidence 899999999 78999999986543 33345669999999999996 99999999999999999999999999
Q ss_pred CcccccCCCCCCCCC---Ccc----ccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh
Q 004157 174 DVLSEFDGNNEAANG---PML----QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~---~~~----~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l 246 (771)
|-+..+......... +.. ...++++..|.+||++..+ ..+..+|+|+|||++|.|+.|.+||.....
T Consensus 219 GsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~------~~~~~sDiWAlGCilyQmlaG~PPFra~Ne 292 (604)
T KOG0592|consen 219 GSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDS------PAGPSSDLWALGCILYQMLAGQPPFRAANE 292 (604)
T ss_pred cccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCC------CCCcccchHHHHHHHHHHhcCCCCCccccH
Confidence 999877654322111 111 1335666699999999873 567899999999999999999999975431
Q ss_pred ------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhh
Q 004157 247 ------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLV 289 (771)
Q Consensus 247 ------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv 289 (771)
.-...+|+...++++++|..+|..|+++.++-+| +||.+.-.
T Consensus 293 yliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H-pFF~~Vdw 346 (604)
T KOG0592|consen 293 YLIFQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH-PFFEGVDW 346 (604)
T ss_pred HHHHHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC-cccccCCh
Confidence 1225678889999999999999999999998887 88877543
No 15
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-37 Score=312.38 Aligned_cols=241 Identities=17% Similarity=0.217 Sum_probs=197.8
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|+|.++||.|. | +||++.+..+|..||.|.+.....+....+..-.|+.+|++|+||||+++++....++
T Consensus 19 ~~y~Il~~IG~GsFg--~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~----- 91 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFG--EVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIED----- 91 (375)
T ss_pred HHHHHHHHHcCCcch--heEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhcc-----
Confidence 3599999999999 9 9999999999999999999876666667788889999999999999999999433332
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCC-CcHHHHHHHHHHHHHHHHHHHc--CC-CceecCCCCCCEEEcCCCcEEEE
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGS-QRDEYYAWGLNQIAKAVSFLNN--DC-KLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~-~~~~~i~~gl~QI~~aL~fLH~--~~-~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
...+|||||+| ++|...|+..+.... ..+.+++.++.|++.||..+|+ +. -++||||||.|||++.+|.+|||
T Consensus 92 -~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLG 170 (375)
T KOG0591|consen 92 -NEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLG 170 (375)
T ss_pred -chhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeec
Confidence 34699999999 789999987553322 2345577779999999999997 22 38999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc---
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--- 248 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~--- 248 (771)
|||+++.+... ......+++++.||+||.+.+ ..|..++|+|||||++|||+.-.+||....+-.
T Consensus 171 DfGL~r~l~s~------~tfA~S~VGTPyYMSPE~i~~------~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~ 238 (375)
T KOG0591|consen 171 DFGLGRFLSSK------TTFAHSLVGTPYYMSPERIHE------SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCK 238 (375)
T ss_pred cchhHhHhcch------hHHHHhhcCCCcccCHHHHhc------CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHH
Confidence 99999988753 222345677789999999987 588999999999999999999999987665322
Q ss_pred ------cCCCC-----cchHHHHHHHhccCCCCCCChHHHhh
Q 004157 249 ------TASIP-----KSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 249 ------~~~IP-----~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
...+| ..+..++..|+..||..||+...++.
T Consensus 239 KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~ 280 (375)
T KOG0591|consen 239 KIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQ 280 (375)
T ss_pred HHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHH
Confidence 23355 45888899999999999998644443
No 16
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=315.85 Aligned_cols=247 Identities=19% Similarity=0.256 Sum_probs=206.5
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
-.|++.+.||.|. + +||.|+.+..++.||||+++....++. +..+++|++.++.++||||++++.+|..+
T Consensus 26 ~~YeL~e~IG~G~sa--~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv~------ 96 (516)
T KOG0582|consen 26 KDYELQEVIGVGASA--VVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVVD------ 96 (516)
T ss_pred cceeEEEEEecccee--EeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEec------
Confidence 3699999999998 6 999999999999999999998877665 78899999999999999999999999985
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||.++ |++.+.|+..-..+ ..+..|+.+++++++||.|||. .|.||||||+.||+|+.+|.+||+|||.
T Consensus 97 --~~LWvVmpfMa~GS~ldIik~~~~~G-l~E~~Ia~iLre~LkaL~YLH~-~G~IHRdvKAgnILi~~dG~VkLadFgv 172 (516)
T KOG0582|consen 97 --SELWVVMPFMAGGSLLDIIKTYYPDG-LEEASIATILREVLKALDYLHQ-NGHIHRDVKAGNILIDSDGTVKLADFGV 172 (516)
T ss_pred --ceeEEeehhhcCCcHHHHHHHHcccc-ccHHHHHHHHHHHHHHHHHHHh-cCceecccccccEEEcCCCcEEEcCcee
Confidence 4899999999 78999998764433 3455688889999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccc-cccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------- 246 (771)
+..+...+.. .... ..+.+...|||||++...- .+|.+++||||||+...||.+|..||.....
T Consensus 173 sa~l~~~G~R---~~~rf~tfvgtp~wmAPEvl~q~~----~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tL 245 (516)
T KOG0582|consen 173 SASLFDSGDR---QVTRFNTFVGTPCWMAPEVLMQQL----HGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTL 245 (516)
T ss_pred eeeecccCce---eeEeeccccCcccccChHHhhhcc----cCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHh
Confidence 8877664321 1222 3345556999999954321 5889999999999999999999988854221
Q ss_pred --------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 --------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 --------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.+....+++++.++..||..||.+||+++++|+| .||++
T Consensus 246 qn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh-~FFk~ 298 (516)
T KOG0582|consen 246 QNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH-AFFKK 298 (516)
T ss_pred cCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc-HHHhh
Confidence 1113455678899999999999999999999998 77754
No 17
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=311.56 Aligned_cols=246 Identities=18% Similarity=0.287 Sum_probs=202.5
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
-..|++.+.||.|+ | +||.++++++++-+|+|++.++...+ ......++|..+|.+++||.||+++..|++.
T Consensus 24 ~~dF~~lkviGkG~fG--kV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~---- 97 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFG--KVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTE---- 97 (357)
T ss_pred hhheeeeeeeeccCCc--eEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccC----
Confidence 34699999999997 7 99999999999999999999764333 3567788999999999999999999999974
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+|+||+ |.|..+|++.+... +...+.++..|+.||.|||+ .+||||||||+||+++.+|.++|+||
T Consensus 98 ----~kLylVld~~~GGeLf~hL~~eg~F~---E~~arfYlaEi~lAL~~LH~-~gIiyRDlKPENILLd~~GHi~LtDF 169 (357)
T KOG0598|consen 98 ----EKLYLVLDYLNGGELFYHLQREGRFS---EDRARFYLAEIVLALGYLHS-KGIIYRDLKPENILLDEQGHIKLTDF 169 (357)
T ss_pred ----CeEEEEEeccCCccHHHHHHhcCCcc---hhHHHHHHHHHHHHHHHHHh-CCeeeccCCHHHeeecCCCcEEEecc
Confidence 4999999999 57999999766433 33355669999999999997 99999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc----
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT---- 249 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~---- 249 (771)
|+|......+.. ...++++..|||||++.. ..++.++|.||||+++|||++|.+||..++...+
T Consensus 170 gL~k~~~~~~~~------t~tfcGT~eYmAPEil~~------~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I 237 (357)
T KOG0598|consen 170 GLCKEDLKDGDA------TRTFCGTPEYMAPEILLG------KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKI 237 (357)
T ss_pred ccchhcccCCCc------cccccCCccccChHHHhc------CCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHH
Confidence 999865543221 233566779999999987 5888999999999999999999999976653221
Q ss_pred --------CC-CCcchHHHHHHHhccCCCCCC----ChHHHhhCCCCCcchhhh
Q 004157 250 --------AS-IPKSLLPDYQRLLSSMPSRRL----NSSKLIENSEYFQNKLVD 290 (771)
Q Consensus 250 --------~~-IP~~l~~~i~~lL~~~P~~Rp----s~~~lL~~~~fF~n~lv~ 290 (771)
.. ++...++++++||..+|.+|. .+.++ +.++||...-.+
T Consensus 238 ~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~i-k~HpfF~~inW~ 290 (357)
T KOG0598|consen 238 LKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEI-KRHPFFKGINWE 290 (357)
T ss_pred hcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHh-hcCcccccCCHH
Confidence 22 566789999999999999997 35554 444888764443
No 18
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-36 Score=327.86 Aligned_cols=238 Identities=18% Similarity=0.243 Sum_probs=205.3
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+...|+.-++||+|. | .||.++.+.+++.|+||.++..... ..+.+.||+.+|+.++|+||+++++.|-..
T Consensus 271 P~~~y~~~~kigqgaSG--~vy~A~~~~~~~~VaiK~m~l~~Q~--~keLilnEi~Vm~~~~H~NiVnfl~Sylv~---- 342 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATG--GVYVARKISTKQEVAIKRMDLRKQP--KKELLLNEILVMRDLHHPNIVNFLDSYLVG---- 342 (550)
T ss_pred hhhhhcchhhhcccccc--ceeeeeeccCCceEEEEEEEeccCC--chhhhHHHHHHHHhccchHHHHHHHHhccc----
Confidence 678899999999999 8 8999999999999999999976433 457899999999999999999999999873
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
+.+|+||||+ ++|.+.+....+. +..|+.++++++.||+|||. .+|+|||||.+||+++.+|.+||+||
T Consensus 343 ----deLWVVMEym~ggsLTDvVt~~~~~----E~qIA~Icre~l~aL~fLH~-~gIiHrDIKSDnILL~~~g~vKltDF 413 (550)
T KOG0578|consen 343 ----DELWVVMEYMEGGSLTDVVTKTRMT----EGQIAAICREILQGLKFLHA-RGIIHRDIKSDNILLTMDGSVKLTDF 413 (550)
T ss_pred ----ceeEEEEeecCCCchhhhhhccccc----HHHHHHHHHHHHHHHHHHHh-cceeeeccccceeEeccCCcEEEeee
Confidence 4899999999 5799988877643 44577889999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-h-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-E------- 245 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-~------- 245 (771)
|||..+..... .+..-++++.|||||+... +.|+.++||||||++++||+-|.+||-.+ .
T Consensus 414 GFcaqi~~~~~------KR~TmVGTPYWMAPEVvtr------k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI 481 (550)
T KOG0578|consen 414 GFCAQISEEQS------KRSTMVGTPYWMAPEVVTR------KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 481 (550)
T ss_pred eeeeccccccC------ccccccCCCCccchhhhhh------cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHH
Confidence 99998876432 2333455668999999876 58899999999999999999999887432 2
Q ss_pred -------hhccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 246 -------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 246 -------l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
++....++..+.+++.+||..|+.+|+++.+||+| +||
T Consensus 482 a~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H-pFl 526 (550)
T KOG0578|consen 482 ATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH-PFL 526 (550)
T ss_pred hhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC-hhh
Confidence 23346678889999999999999999999999999 566
No 19
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=4e-35 Score=307.37 Aligned_cols=250 Identities=20% Similarity=0.318 Sum_probs=203.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC-eeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN-ILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPn-Ilkv~d~~e~e~~d~~ 96 (771)
..|+..+++|+|+ | +||+|+.+.+|+-||+|++......+.....+.+|+-+|+.|+|+| |+.++|++.+++..+
T Consensus 11 ~~~~~~eklGeGtyg--~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~- 87 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYG--VVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHR- 87 (323)
T ss_pred HHHHHHHHhCCCCce--EEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccc-
Confidence 4588889999999 9 9999999999999999999987665556667889999999999999 999999998764211
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCC-CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
....+|+|+||+ .+|..++...... .......|+..++||+.||.|||+ .+|+||||||+||+|+++|.+||+|||
T Consensus 88 -~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~-~~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 88 -GIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS-HGILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred -ccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh-CCeecccCCcceEEECCCCcEeeeccc
Confidence 134899999999 7899999887642 122236788889999999999997 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccc-cccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hhcc
Q 004157 175 VLSEFDGNNEAANGPMLQYA-WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRNT 249 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~-~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~~~ 249 (771)
+++.+.- |+..+. .+++..|+|||++.+. ..|+..+||||+||+++||+++.++|.... +..+
T Consensus 166 lAra~~i-------p~~~yt~evvTlWYRaPEvLlGs-----~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~I 233 (323)
T KOG0594|consen 166 LARAFSI-------PMRTYTPEVVTLWYRAPEVLLGS-----TSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRI 233 (323)
T ss_pred hHHHhcC-------CcccccccEEEeeccCHHHhcCC-----CcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHH
Confidence 9986543 333333 2344589999999885 578899999999999999999999885421 1000
Q ss_pred -----------------------------------CCCC---cchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 250 -----------------------------------ASIP---KSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 250 -----------------------------------~~IP---~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
..+| .+..+++.+||..+|.+|.++...|+| +||+.
T Consensus 234 f~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h-~yf~~ 307 (323)
T KOG0594|consen 234 FRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH-PYFSE 307 (323)
T ss_pred HHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC-hhhcc
Confidence 0112 367788899999999999999999998 67754
No 20
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-35 Score=327.73 Aligned_cols=238 Identities=18% Similarity=0.266 Sum_probs=203.8
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC-CCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT-NAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~-~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
-+|++|+.+|.|. | .|..|++..+|+.+|||++.+. ...+.....+.+|+-+||.|.||||+++||+|++
T Consensus 12 GpwkLgkTLG~Gstg--~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~------ 83 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTG--CVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWEN------ 83 (786)
T ss_pred cceeccccccCCCCc--eehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeecc------
Confidence 3799999999998 8 8999999999999999999976 4444556678899999999999999999999997
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
+.++|+|.||+ |.|.++|.+++...+. +. ...+.||+.|+.|||. .+|+|||+||+|++++..+++||+|||
T Consensus 84 --~~~lylvlEyv~gGELFdylv~kG~l~e~--ea-a~ff~QIi~gv~yCH~-~~icHRDLKpENlLLd~~~nIKIADFG 157 (786)
T KOG0588|consen 84 --KQHLYLVLEYVPGGELFDYLVRKGPLPER--EA-AHFFRQILDGVSYCHA-FNICHRDLKPENLLLDVKNNIKIADFG 157 (786)
T ss_pred --CceEEEEEEecCCchhHHHHHhhCCCCCH--HH-HHHHHHHHHHHHHHhh-hcceeccCCchhhhhhcccCEeeeccc
Confidence 56999999999 6799988877654332 22 2349999999999996 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc-----
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT----- 249 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~----- 249 (771)
++..-... .++ -..++.+.|.+||++.+. ...+.++|+||+|+++|.|++|.-||+++.++.+
T Consensus 158 MAsLe~~g------klL-eTSCGSPHYA~PEIV~G~-----pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~ 225 (786)
T KOG0588|consen 158 MASLEVPG------KLL-ETSCGSPHYAAPEIVSGR-----PYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQ 225 (786)
T ss_pred eeecccCC------ccc-cccCCCcccCCchhhcCC-----CCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHH
Confidence 99754432 222 234566799999999985 5567899999999999999999999998876643
Q ss_pred -------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 250 -------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 250 -------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
..||.+.++++.+||..||.+|++.+++++|++
T Consensus 226 ~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~ 265 (786)
T KOG0588|consen 226 RGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPF 265 (786)
T ss_pred cCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCch
Confidence 578889999999999999999999999999954
No 21
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-35 Score=321.76 Aligned_cols=243 Identities=22% Similarity=0.288 Sum_probs=198.0
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~ 92 (771)
.-+|.+++.+|.|. | +|+.|.++.+|+.||||+++++... ....+.+++|+.++++++ ||||++++++++..+
T Consensus 16 ~g~y~~~~~lG~Gsfg--kV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFG--KVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cCceeeeeeecCCCCe--eEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 45799999999998 8 9999999999999999988875221 234567789999999999 999999999999853
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC-CcEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-LDWK 169 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~-G~~K 169 (771)
.+||||||| +.|.++|.+.+...+ .....+++||+.|+.|||+ .||+||||||+||+++.+ +++|
T Consensus 94 --------~~~ivmEy~~gGdL~~~i~~~g~l~E---~~ar~~F~Qlisav~y~H~-~gi~HRDLK~ENilld~~~~~~K 161 (370)
T KOG0583|consen 94 --------KIYIVMEYCSGGDLFDYIVNKGRLKE---DEARKYFRQLISAVAYCHS-RGIVHRDLKPENILLDGNEGNLK 161 (370)
T ss_pred --------eEEEEEEecCCccHHHHHHHcCCCCh---HHHHHHHHHHHHHHHHHHh-CCEeeCCCCHHHEEecCCCCCEE
Confidence 799999999 479999988554333 3456669999999999997 899999999999999999 9999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-- 247 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-- 247 (771)
|+|||++....... -.....++.+.|+|||++.+.+. ..+.++|+||+|+++|.|++|..||......
T Consensus 162 l~DFG~s~~~~~~~------~~l~t~cGsp~Y~aPEvl~~~~~----Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l 231 (370)
T KOG0583|consen 162 LSDFGLSAISPGED------GLLKTFCGSPAYAAPEVLSGKGT----YSGKAADVWSLGVILYVLLCGRLPFDDSNVPNL 231 (370)
T ss_pred EeccccccccCCCC------CcccCCCCCcccCCHHHhCCCCC----cCCchhhhhhhHHHHHHHHhCCCCCCCccHHHH
Confidence 99999998773110 01223456679999999987421 2358999999999999999999999875522
Q ss_pred ------ccCCCCc-----chHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ------NTASIPK-----SLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ------~~~~IP~-----~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....+|. .+..++.+||..+|.+|+++.+++.| +||+
T Consensus 232 ~~ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h-~w~~ 279 (370)
T KOG0583|consen 232 YRKIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEH-PWFQ 279 (370)
T ss_pred HHHHhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhC-hhhc
Confidence 2234454 45889999999999999999999977 5554
No 22
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.9e-34 Score=313.40 Aligned_cols=250 Identities=20% Similarity=0.289 Sum_probs=194.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|+ | .||+|+++.+|..|+||++............+.+|++++++|+||||+++++++...+.. .
T Consensus 1 ry~i~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~---~ 75 (338)
T cd07859 1 RYKIQEVIGKGSYG--VVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR---E 75 (338)
T ss_pred CeEEEEEEeecCCe--EEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCC---C
Confidence 599999999998 8 999999999999999999875433333445678899999999999999999988654321 1
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...+|+||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.
T Consensus 76 ~~~~~lv~e~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~ 151 (338)
T cd07859 76 FKDIYVVFELMESDLHQVIKANDD---LTPEHHQFFLYQLLRALKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLAR 151 (338)
T ss_pred CceEEEEEecCCCCHHHHHHhccc---CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCCcEEEccCcccc
Confidence 24689999999 578888876532 2344566779999999999996 899999999999999999999999999997
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----------- 246 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----------- 246 (771)
........ ........++..|+|||++.+.. ..++.++|+|||||++|+|++|.+||.....
T Consensus 152 ~~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~----~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~ 224 (338)
T cd07859 152 VAFNDTPT---AIFWTDYVATRWYRAPELCGSFF----SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLL 224 (338)
T ss_pred ccccccCc---cccccCCCCCCCcCCHHHHhccc----cccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHh
Confidence 65332110 11111234456899999976421 2466789999999999999999988743211
Q ss_pred --------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 --------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 --------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....++..+.+++.+||..+|.+||++.++++| +||++
T Consensus 225 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h-p~f~~ 295 (338)
T cd07859 225 GTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD-PYFKG 295 (338)
T ss_pred CCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC-chhhh
Confidence 0012456678899999999999999999999998 56643
No 23
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-35 Score=309.00 Aligned_cols=245 Identities=18% Similarity=0.271 Sum_probs=198.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
....|+-.+.+|.|. | .||+|+..++++.||||+.-.... .-.+|+++|+.++||||++++.+|......
T Consensus 22 ~~i~~~~~~liG~GsFg--~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~~~- 92 (364)
T KOG0658|consen 22 VEISYEAVRLIGSGSFG--VVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSSTES- 92 (364)
T ss_pred eEEEEEeeEEEeecccc--eEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecCCC-
Confidence 456789999999999 9 999999999999999999875321 234699999999999999999999764321
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCCC-CCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC-CcEEEEc
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLEG-SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-LDWKLHA 172 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~~-~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~-G~~KL~d 172 (771)
..-+..+||||+ .+|.++++...... ......|+.+.+||++||.|||+ .+|+||||||.||+||.+ |..||||
T Consensus 93 --d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~-~~IcHRDIKPqNlLvD~~tg~LKicD 169 (364)
T KOG0658|consen 93 --DEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS-HGICHRDIKPQNLLVDPDTGVLKICD 169 (364)
T ss_pred --chhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh-cCcccCCCChheEEEcCCCCeEEecc
Confidence 023667999999 78999998642111 11223477779999999999997 999999999999999976 9999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hh-
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~- 247 (771)
||-+..+..... ...+.+...|+|||++.+. ..|+.++|+||.||++.||+-|+++|.+++ +.
T Consensus 170 FGSAK~L~~~ep-------niSYicSRyYRaPELifga-----~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~e 237 (364)
T KOG0658|consen 170 FGSAKVLVKGEP-------NISYICSRYYRAPELIFGA-----TEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVE 237 (364)
T ss_pred CCcceeeccCCC-------ceeEEEeccccCHHHHcCc-----cccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHH
Confidence 999988765322 2345778899999999986 789999999999999999999999986432 10
Q ss_pred ------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ------------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....+|.+..+++.++|..+|.+|.++.+++.| +||+.
T Consensus 238 Iik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h-~fFde 311 (364)
T KOG0658|consen 238 IIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH-PFFDE 311 (364)
T ss_pred HHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc-hhhHH
Confidence 013567889999999999999999999999998 56643
No 24
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=8.1e-34 Score=305.80 Aligned_cols=244 Identities=19% Similarity=0.277 Sum_probs=191.3
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|+ | +||+|+++.+|+.|+||++....... ....+.+|+++++.++||||++++++++.+
T Consensus 3 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---- 75 (303)
T cd07869 3 KADSYEKLEKLGEGSYA--TVYKGKSKVNGKLVALKVIRLQEEEG-TPFTAIREASLLKGLKHANIVLLHDIIHTK---- 75 (303)
T ss_pred ccccceEeeeEEecCCE--EEEEEEECCCCCEEEEEEeccccccc-cchhHHHHHHHHhhCCCCCcCeEEEEEecC----
Confidence 346799999999998 8 99999999999999999997543222 234567899999999999999999999863
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 76 ----~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~Nill~~~~~~kl~Dfg 148 (303)
T cd07869 76 ----ETLTLVFEYVHTDLCQYMDKHPG--GLHPENVKLFLFQLLRGLSYIHQ-RYILHRDLKPQNLLISDTGELKLADFG 148 (303)
T ss_pred ----CeEEEEEECCCcCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEECCCC
Confidence 4899999999 678887765431 12344567779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----hhc-
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----LRN- 248 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-----l~~- 248 (771)
++......... ......+..|+|||++.+. ..++.++|+|||||++|+|++|..||.... +..
T Consensus 149 ~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~ 217 (303)
T cd07869 149 LARAKSVPSHT------YSNEVVTLWYRPPDVLLGS-----TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERI 217 (303)
T ss_pred cceeccCCCcc------CCCCcccCCCCChHHHcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHH
Confidence 98754332110 1112345589999997653 345678999999999999999998885310 000
Q ss_pred ---------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 249 ---------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 ---------------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
...++..+.+++.+||+.+|.+|+|+.++++| +||++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h-~~f~~ 293 (303)
T cd07869 218 FLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH-EYFSD 293 (303)
T ss_pred HHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC-ccccc
Confidence 00123457789999999999999999999998 66665
No 25
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=7.2e-34 Score=303.02 Aligned_cols=240 Identities=18% Similarity=0.260 Sum_probs=190.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|+ | +||+|+++.+++.|+||++......+...+.+.+|++++++++||||++++++++.+
T Consensus 2 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 72 (287)
T cd07848 2 KFEVLGVVGEGAYG--VVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRR------- 72 (287)
T ss_pred CceEEEEecccCCE--EEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecC-------
Confidence 599999999998 8 999999999999999999986544445567788999999999999999999999864
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..+|+||||+ +.+...+.... .......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.
T Consensus 73 -~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~ 148 (287)
T cd07848 73 -GKLYLVFEYVEKNMLELLEEMP--NGVPPEKVRSYIYQLIKAIHWCHK-NDIVHRDIKPENLLISHNDVLKLCDFGFAR 148 (287)
T ss_pred -CEEEEEEecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCCcEEEeeccCcc
Confidence 4899999999 44444444322 123344567779999999999996 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h---c--
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R---N-- 248 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~---~-- 248 (771)
......... .....++..|+|||++.+ ..++.++|+|||||++|||++|.+||..... . .
T Consensus 149 ~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~ 217 (287)
T cd07848 149 NLSEGSNAN-----YTEYVATRWYRSPELLLG------APYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVL 217 (287)
T ss_pred ccccccccc-----ccccccccccCCcHHHcC------CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhh
Confidence 764321110 111234558999999876 3567899999999999999999988853210 0 0
Q ss_pred -----------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 249 -----------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 249 -----------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
...++..+.+++++||+.+|.+||+++++++|++|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 218 GPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred CCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 01255668899999999999999999999999543
No 26
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.1e-35 Score=303.97 Aligned_cols=239 Identities=21% Similarity=0.295 Sum_probs=202.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.+|+|.+.+|.|+ | +|-+|+....|+.||||.+.+..-.+ ..+-.+++|++++..|.||||+++|++||+
T Consensus 53 HRyE~~etLGkGTYG--KVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFEN------ 124 (668)
T KOG0611|consen 53 HRYEITETLGKGTYG--KVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFEN------ 124 (668)
T ss_pred hHHHHHHHhcCCccc--ceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcC------
Confidence 4799999999999 9 99999999999999999998765443 667889999999999999999999999997
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
++.+.|||||. +.|++++.+++...+.. ...+++||+.|+.|||. ++++|||||.+||+++.++++||+|||
T Consensus 125 --kdKIvivMEYaS~GeLYDYiSer~~LsErE---aRhfFRQIvSAVhYCHk-nrVvHRDLKLENILLD~N~NiKIADFG 198 (668)
T KOG0611|consen 125 --KDKIVIVMEYASGGELYDYISERGSLSERE---ARHFFRQIVSAVHYCHK-NRVVHRDLKLENILLDQNNNIKIADFG 198 (668)
T ss_pred --CceEEEEEEecCCccHHHHHHHhccccHHH---HHHHHHHHHHHHHHHhh-ccceecccchhheeecCCCCeeeeccc
Confidence 45899999999 68999999987554333 33449999999999995 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----cc-
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----NT- 249 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----~~- 249 (771)
++-.+.+.. +-..+++.+-|.+||++.+. ..-+..+|.||||+|+|.|..|..||+..+.+ ++
T Consensus 199 LSNly~~~k-------fLqTFCGSPLYASPEIvNG~-----PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs 266 (668)
T KOG0611|consen 199 LSNLYADKK-------FLQTFCGSPLYASPEIVNGT-----PYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQIS 266 (668)
T ss_pred hhhhhcccc-------HHHHhcCCcccCCccccCCC-----CCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhh
Confidence 987776532 12345666799999999874 33457899999999999999999999876543 22
Q ss_pred ------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 250 ------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 250 ------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
..-|....-+|+.||-.||.+|-|+.++-.| ||.
T Consensus 267 ~GaYrEP~~PSdA~gLIRwmLmVNP~RRATieDiAsH-WWv 306 (668)
T KOG0611|consen 267 RGAYREPETPSDASGLIRWMLMVNPERRATIEDIASH-WWV 306 (668)
T ss_pred cccccCCCCCchHHHHHHHHHhcCcccchhHHHHhhh-hee
Confidence 2457778889999999999999999999887 554
No 27
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.1e-33 Score=302.74 Aligned_cols=240 Identities=18% Similarity=0.260 Sum_probs=189.6
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|++.+.||.|+ | +||+|.++.++..|+||++...... .....+.+|+++++.|+||||+++++++..+
T Consensus 5 ~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------ 75 (288)
T cd07871 5 ETYVKLDKLGEGTYA--TVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKNLKHANIVTLHDIIHTE------ 75 (288)
T ss_pred ccceEeeEEecCCCE--EEEEEEECCCCCEEEEEEecccccC-CcchhHHHHHHHHHhCCCCCEeeEEEEEcCC------
Confidence 4599999999998 8 9999999999999999999754322 2234567899999999999999999999764
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 76 --~~~~lv~e~~~~~l~~~l~~~~~~--~~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~Nil~~~~~~~kl~DfG~~ 150 (288)
T cd07871 76 --RCLTLVFEYLDSDLKQYLDNCGNL--MSMHNVKIFMFQLLRGLSYCHK-RKILHRDLKPQNLLINEKGELKLADFGLA 150 (288)
T ss_pred --CeEEEEEeCCCcCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCCCEEECcCcce
Confidence 3899999999 6788888654321 2234456679999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------- 247 (771)
......... ......+..|+|||++.+. ..++.++|+|||||++|+|++|.+||......
T Consensus 151 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 219 (288)
T cd07871 151 RAKSVPTKT------YSNEVVTLWYRPPDVLLGS-----TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRL 219 (288)
T ss_pred eeccCCCcc------ccCceecccccChHHhcCC-----cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 765432110 1112345589999998653 34677899999999999999999887432210
Q ss_pred ----------c-----------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 248 ----------N-----------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 248 ----------~-----------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
. ...++....+++++||..+|.+|+|+.++++|++|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 220 LGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 0 01245567889999999999999999999999543
No 28
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=4e-34 Score=306.71 Aligned_cols=237 Identities=16% Similarity=0.195 Sum_probs=192.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.||.|+ | +||+|.++.+|+.|+||++...... ....+.+.+|++++++++||||+++++.+++.
T Consensus 2 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~------ 73 (291)
T cd05612 2 DLERIKTVGTGTFG--RVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQ------ 73 (291)
T ss_pred CceeeeeeecCCCe--EEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccC------
Confidence 599999999998 8 9999999999999999999754322 13456788999999999999999999998763
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++|+||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~~~~L~~~~~~~~~~---~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~NIli~~~~~~kl~Dfg~ 147 (291)
T cd05612 74 --RFLYMLMEYVPGGELFSYLRNSGRF---SNSTGLFYASEIVCALEYLHS-KEIVYRDLKPENILLDKEGHIKLTDFGF 147 (291)
T ss_pred --CeEEEEEeCCCCCCHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECCCCCEEEEecCc
Confidence 4899999999 5799998775432 233455669999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+....... ....+...|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 148 ~~~~~~~~---------~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~ 212 (291)
T cd05612 148 AKKLRDRT---------WTLCGTPEYLAPEVIQS------KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILA 212 (291)
T ss_pred chhccCCc---------ccccCChhhcCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 87664311 11234458999999876 35678999999999999999999888543211
Q ss_pred ----ccCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcc
Q 004157 248 ----NTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQN 286 (771)
Q Consensus 248 ----~~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n 286 (771)
....++..+.+++++||..||.+|++ +.++++| +||..
T Consensus 213 ~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h-~~~~~ 259 (291)
T cd05612 213 GKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH-RWFKS 259 (291)
T ss_pred CCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC-ccccC
Confidence 11235667899999999999999995 9999998 55543
No 29
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=4.4e-34 Score=312.04 Aligned_cols=240 Identities=16% Similarity=0.234 Sum_probs=194.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
.-..|++.+.||.|+ | +||+|+++.+|+.|+||++.+... .....+.+.+|+++|++++||||++++++++.+
T Consensus 16 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--- 90 (329)
T PTZ00263 16 KLSDFEMGETLGTGSFG--RVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDE--- 90 (329)
T ss_pred CchheEEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcC---
Confidence 345799999999998 8 999999999999999999975421 123456788999999999999999999999864
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+||||+ ++|.+++...... ....+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 91 -----~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~~~~~kl~D 161 (329)
T PTZ00263 91 -----NRVYFLLEFVVGGELFTHLRKAGRF---PNDVAKFYHAELVLAFEYLHS-KDIIYRDLKPENLLLDNKGHVKVTD 161 (329)
T ss_pred -----CEEEEEEcCCCCChHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHEEECCCCCEEEee
Confidence 4899999999 5798888775432 344566679999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----hc
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN 248 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~~ 248 (771)
||++....... ....++..|+|||++.+ ..++.++|+|||||++|+|++|..||..... ..
T Consensus 162 fg~~~~~~~~~---------~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~ 226 (329)
T PTZ00263 162 FGFAKKVPDRT---------FTLCGTPEYLAPEVIQS------KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEK 226 (329)
T ss_pred ccCceEcCCCc---------ceecCChhhcCHHHHcC------CCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence 99998664321 11234458999999876 3567899999999999999999998854321 11
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcc
Q 004157 249 --------TASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQN 286 (771)
Q Consensus 249 --------~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n 286 (771)
...++..+.+++.+||+.+|.+|++ +.+++.| +||.+
T Consensus 227 i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h-p~f~~ 276 (329)
T PTZ00263 227 ILAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH-PYFHG 276 (329)
T ss_pred HhcCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC-CccCC
Confidence 1235667889999999999999997 6899998 66654
No 30
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.5e-33 Score=306.55 Aligned_cols=257 Identities=16% Similarity=0.232 Sum_probs=207.7
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
-..|++...||.|+ | .||.|+.|.+|+.+|+|++.++..-. .+.+.++.|-.+|....+|+||++|..|.+
T Consensus 140 ~~DFe~Lk~IgkGAfG--eVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD----- 212 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFG--EVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQD----- 212 (550)
T ss_pred cccchhheeeccccce--eEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecC-----
Confidence 45799999999999 9 99999999999999999999875433 457778889999999999999999999987
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
+.++|+||||+ |++..+|.+.+.. .+++.+.++.+++.|+..||. .|+|||||||+|++|+..|.+||+||
T Consensus 213 ---~~~LYLiMEylPGGD~mTLL~~~~~L---~e~~arfYiaE~vlAI~~iH~-~gyIHRDIKPdNlLiD~~GHiKLSDF 285 (550)
T KOG0605|consen 213 ---KEYLYLIMEYLPGGDMMTLLMRKDTL---TEDWARFYIAETVLAIESIHQ-LGYIHRDIKPDNLLIDAKGHIKLSDF 285 (550)
T ss_pred ---CCeeEEEEEecCCccHHHHHHhcCcC---chHHHHHHHHHHHHHHHHHHH-cCcccccCChhheeecCCCCEeeccc
Confidence 45999999999 6899999887654 345567779999999999996 99999999999999999999999999
Q ss_pred CcccccCCCCC--------------------CCC---------------------CCccccccccCCCCCChhccccccc
Q 004157 174 DVLSEFDGNNE--------------------AAN---------------------GPMLQYAWLVGAQYKPVELAKSDWT 212 (771)
Q Consensus 174 gla~~~~~~~~--------------------~~~---------------------~~~~~~~~~~~~~Y~aPE~~~~~~~ 212 (771)
|+|..+..... ... ...+.+..++++.|+|||++.+
T Consensus 286 GLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~--- 362 (550)
T KOG0605|consen 286 GLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG--- 362 (550)
T ss_pred cccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc---
Confidence 99964322000 000 0111233456679999999988
Q ss_pred cccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc----------------CCCCcchHHHHHHHhccCCCCCCC---
Q 004157 213 AVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT----------------ASIPKSLLPDYQRLLSSMPSRRLN--- 273 (771)
Q Consensus 213 ~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~----------------~~IP~~l~~~i~~lL~~~P~~Rps--- 273 (771)
++|+..+|.|||||+||||+.|.|||.+++...+ ..+..+..++|.+||. +|..|.-
T Consensus 363 ---kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G 438 (550)
T KOG0605|consen 363 ---KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKG 438 (550)
T ss_pred ---CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCccc
Confidence 5789999999999999999999999976553221 3455678999999999 9999996
Q ss_pred hHHHhhCCCCCcchhhhhhhhhh
Q 004157 274 SSKLIENSEYFQNKLVDTIHFME 296 (771)
Q Consensus 274 ~~~lL~~~~fF~n~lv~~~~~L~ 296 (771)
++++-.| +||++.-.+.+....
T Consensus 439 ~~EIK~H-PfF~~v~W~~l~~~~ 460 (550)
T KOG0605|consen 439 AEEIKKH-PFFKGVDWDHLREMP 460 (550)
T ss_pred HHHHhcC-CccccCCcchhhcCC
Confidence 6777666 899876666555443
No 31
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=5.4e-33 Score=295.48 Aligned_cols=241 Identities=18% Similarity=0.254 Sum_probs=192.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.||.|. | +||+|+++.+|..|+||++......+.....+.+|+.++++++||||+++++.++.+
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 71 (285)
T cd07861 1 DYTKIEKIGEGTYG--VVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQE------- 71 (285)
T ss_pred CceEeeEecccCce--EEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeC-------
Confidence 489999999997 7 999999999999999999976544444456788999999999999999999999863
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..+|+||||+ ++|.+++.............+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 72 -~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 149 (285)
T cd07861 72 -SRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS-RRVLHRDLKPQNLLIDNKGVIKLADFGLAR 149 (285)
T ss_pred -CeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCCHHHEEEcCCCcEEECccccee
Confidence 4899999999 6788887664432333455566779999999999996 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----------- 246 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----------- 246 (771)
........ .........|+|||++.+. ..++.++|+|||||++|+|++|.++|.....
T Consensus 150 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~ 218 (285)
T cd07861 150 AFGIPVRV------YTHEVVTLWYRAPEVLLGS-----PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRIL 218 (285)
T ss_pred ecCCCccc------ccCCcccccccChHHhcCC-----CCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHh
Confidence 55331110 1111334579999987653 2456789999999999999999988753210
Q ss_pred ------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 ------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 ------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.....++..+.+++++||..+|.+||++.++++|++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~ 284 (285)
T cd07861 219 GTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPY 284 (285)
T ss_pred CCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCC
Confidence 001246777889999999999999999999999854
No 32
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=300.28 Aligned_cols=246 Identities=18% Similarity=0.284 Sum_probs=194.6
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|..++.+|.|. | +||.++++.+|+.+|||........ ..+.+.+|+++|++|+|||||++++......
T Consensus 16 ~~~~~~~~~lG~Gs~G--~V~l~~~~~~g~~~AvK~v~~~~~~--~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~---- 87 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFG--SVYLATNKKTGELMAVKSVELEDSP--TSESLEREIRILSRLNHPNIVQYYGSSSSRE---- 87 (313)
T ss_pred cchhhhhccccCccce--EEEEEEecCCCcceeeeeeecccch--hHHHHHHHHHHHHhCCCCCEEeeCCcccccc----
Confidence 34689999999998 9 9999999999999999999875222 2677899999999999999999999744321
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-CCcEEEEcc
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLHAF 173 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~-~G~~KL~dF 173 (771)
...++|.|||+ ++|.+++++.+. ...+..++....||++||.|||+ .|+|||||||+||+++. +|.+||+||
T Consensus 88 --~~~~~i~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs-~g~vH~DiK~~NiLl~~~~~~~KlaDF 162 (313)
T KOG0198|consen 88 --NDEYNIFMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHS-KGIVHCDIKPANILLDPSNGDVKLADF 162 (313)
T ss_pred --CeeeEeeeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCEeccCcccceEEEeCCCCeEEeccC
Confidence 12699999999 689999998763 23355577779999999999996 99999999999999999 799999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh----h--h-
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----E--L- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~----~--l- 246 (771)
|++......... ........++..|||||++..+ .....++|||||||++.||++|.+|+... . +
T Consensus 163 G~a~~~~~~~~~---~~~~~~~~Gtp~~maPEvi~~g-----~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ 234 (313)
T KOG0198|consen 163 GLAKKLESKGTK---SDSELSVQGTPNYMAPEVIRNG-----EVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLL 234 (313)
T ss_pred cccccccccccc---ccccccccCCccccCchhhcCC-----CcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHH
Confidence 999877641111 1112234556799999999852 12235899999999999999999887641 1 0
Q ss_pred ----hcc----CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 ----RNT----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 ----~~~----~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
... ..++....+++.+|+..+|..|||++++|+| +|..
T Consensus 235 ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h-pf~~ 280 (313)
T KOG0198|consen 235 IGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEH-PFLK 280 (313)
T ss_pred HhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhC-hhhh
Confidence 011 2345567888999999999999999999998 4443
No 33
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-33 Score=285.27 Aligned_cols=239 Identities=16% Similarity=0.249 Sum_probs=198.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
-.|++.+.+|.|+ | +|+.++.+.+|..+|+|++++...-. .+.+...||-++|+.+.||.+++++..+.+.
T Consensus 44 ~dfe~~~tlGtGSFG--rV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~----- 116 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFG--RVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDN----- 116 (355)
T ss_pred hhhhheeeeccCccc--eEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccC-----
Confidence 4688888999999 9 99999999999999999998753322 5567788999999999999999999999863
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
+++|+||||+ +.|..+|++.+...+.. ...+..||+.||+|||. ++|++|||||+||+++.+|.+||.|||
T Consensus 117 ---~~lymvmeyv~GGElFS~Lrk~~rF~e~~---arFYAAeivlAleylH~-~~iiYRDLKPENiLlD~~G~iKitDFG 189 (355)
T KOG0616|consen 117 ---SNLYMVMEYVPGGELFSYLRKSGRFSEPH---ARFYAAEIVLALEYLHS-LDIIYRDLKPENLLLDQNGHIKITDFG 189 (355)
T ss_pred ---CeEEEEEeccCCccHHHHHHhcCCCCchh---HHHHHHHHHHHHHHHHh-cCeeeccCChHHeeeccCCcEEEEecc
Confidence 4999999999 57999999876544433 34459999999999996 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------ 248 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~------ 248 (771)
++....+. .+.-++++.|+|||++.+ +.+..++|.|+||+|||||+.|.+||...+...
T Consensus 190 FAK~v~~r---------T~TlCGTPeYLAPEii~s------k~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~ 254 (355)
T KOG0616|consen 190 FAKRVSGR---------TWTLCGTPEYLAPEIIQS------KGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKIL 254 (355)
T ss_pred ceEEecCc---------EEEecCCccccChHHhhc------CCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHH
Confidence 99988652 344456679999999987 688899999999999999999999986554322
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcch
Q 004157 249 ------TASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQNK 287 (771)
Q Consensus 249 ------~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n~ 287 (771)
...+...+.+++.+||+.|-.+|.. ..++..| +||+..
T Consensus 255 ~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H-~wF~~v 303 (355)
T KOG0616|consen 255 EGKVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNH-PWFKGV 303 (355)
T ss_pred hCcccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccC-cccccc
Confidence 2345567889999999999999942 4466555 677653
No 34
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.4e-33 Score=307.16 Aligned_cols=234 Identities=17% Similarity=0.240 Sum_probs=187.6
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iy 103 (771)
.||.|+ | +||+++++.+|+.|+||++.+... .......+.+|+++|++++||||+++++.++.. ..+|
T Consensus 2 ~lG~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~--------~~~~ 71 (323)
T cd05571 2 LLGKGTFG--KVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTH--------DRLC 71 (323)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcC--------CEEE
Confidence 578887 8 999999999999999999986422 223445677899999999999999999999863 4899
Q ss_pred EEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
|||||+ ++|.+++...... ....+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.....
T Consensus 72 lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~qi~~~L~~lH~-~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~ 147 (323)
T cd05571 72 FVMEYANGGELFFHLSRERVF---SEDRARFYGAEIVSALGYLHS-CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGIS 147 (323)
T ss_pred EEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHEEECCCCCEEEeeCCCCccccc
Confidence 999999 4788888765432 344566779999999999996 8999999999999999999999999999875432
Q ss_pred CCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------------cc
Q 004157 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------NT 249 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------~~ 249 (771)
... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||...+.. ..
T Consensus 148 ~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p 215 (323)
T cd05571 148 DGA------TMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 215 (323)
T ss_pred CCC------cccceecCccccChhhhcC------CCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 111 0112334568999999876 35778999999999999999999888543211 11
Q ss_pred CCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 250 ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 250 ~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
..++..+.+++.+||..+|.+|+ ++.++++| +||.+
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h-~~f~~ 256 (323)
T cd05571 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH-RFFAS 256 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC-CCcCC
Confidence 34677889999999999999999 89999998 56655
No 35
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-34 Score=304.71 Aligned_cols=251 Identities=16% Similarity=0.198 Sum_probs=192.3
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------------hHHHHHHHHHHHHhcCCCCCeeEEe
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------------GHLAAARNGVKRLRTVRHPNILAFL 85 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~------------~~~~~~~~ei~~Lk~LrHPnIlkv~ 85 (771)
..|++++.||.|. | .|-+|++..+++.||||+++++.... ...+..++|+.+||+|+|||||+++
T Consensus 97 Nqy~l~~eiG~G~yG--kVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 97 NQYELIKEIGSGQYG--KVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred hheehhhhhcCCccc--eEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 4699999999999 9 99999999999999999999753211 2246889999999999999999999
Q ss_pred eeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEc
Q 004157 86 HSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT 163 (771)
Q Consensus 86 d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~ 163 (771)
+++.+.. .+.+|||+||| +++.+.=.... ......-+.++..++.||.|||. .|||||||||+|++++
T Consensus 175 EvLDDP~------s~~~YlVley~s~G~v~w~p~d~~---els~~~Ar~ylrDvv~GLEYLH~-QgiiHRDIKPsNLLl~ 244 (576)
T KOG0585|consen 175 EVLDDPE------SDKLYLVLEYCSKGEVKWCPPDKP---ELSEQQARKYLRDVVLGLEYLHY-QGIIHRDIKPSNLLLS 244 (576)
T ss_pred EeecCcc------cCceEEEEEeccCCccccCCCCcc---cccHHHHHHHHHHHHHHHHHHHh-cCeeccccchhheEEc
Confidence 9998766 44999999999 45433211111 02223345559999999999996 8999999999999999
Q ss_pred CCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh
Q 004157 164 QTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (771)
Q Consensus 164 ~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~ 243 (771)
++|.+||+|||.+..............+. ..++++.|+|||.+.++-. ....+.+.|||+||+++|.++.|..||-.
T Consensus 245 ~~g~VKIsDFGVs~~~~~~~~~~~d~~L~-~tvGTPAF~APE~c~~~~~--~~~~g~a~DiWalGVTLYCllfG~~PF~~ 321 (576)
T KOG0585|consen 245 SDGTVKISDFGVSNEFPQGSDEGSDDQLS-RTVGTPAFFAPELCSGGNS--FSYSGFALDIWALGVTLYCLLFGQLPFFD 321 (576)
T ss_pred CCCcEEeeccceeeecccCCccccHHHHh-hcCCCccccchHhhcCCCC--ccccchhhhhhhhhhhHHHhhhccCCccc
Confidence 99999999999998764332111111111 1355669999999887422 13456799999999999999999988765
Q ss_pred hhhhc----c----------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 244 EELRN----T----------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 244 ~~l~~----~----------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
+.... + ..+...+.+++.+||.+||..|+++.++..|+|.-
T Consensus 322 ~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt 376 (576)
T KOG0585|consen 322 DFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVT 376 (576)
T ss_pred chHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceec
Confidence 43211 1 22455689999999999999999999998885533
No 36
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2e-33 Score=313.28 Aligned_cols=195 Identities=22% Similarity=0.278 Sum_probs=169.3
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-C-----CCeeEEeeeEEec
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-H-----PNILAFLHSTEVE 91 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-H-----PnIlkv~d~~e~e 91 (771)
.+|+|.+.||.|+ | .|.+|.++.+++.||||++..+ .....+...|+++|..|+ | -|||+++|+|..
T Consensus 186 ~rY~V~e~LGkGtFG--QVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f- 259 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFG--QVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF- 259 (586)
T ss_pred EEEEEEEEecccccc--eeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc-
Confidence 3789999999999 9 9999999999999999999743 356778889999999998 4 289999999987
Q ss_pred ccCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC--CcE
Q 004157 92 NIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT--LDW 168 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~--G~~ 168 (771)
++++|||+|.. .+|+++|+.+.+.+. ....++.++.||+.||.|||+ .+||||||||+||++... ..+
T Consensus 260 -------r~HlciVfELL~~NLYellK~n~f~Gl-sl~~ir~~~~Qil~~L~~L~~-l~IIHcDLKPENILL~~~~r~~v 330 (586)
T KOG0667|consen 260 -------RNHLCIVFELLSTNLYELLKNNKFRGL-SLPLVRKFAQQILTALLFLHE-LGIIHCDLKPENILLKDPKRSRI 330 (586)
T ss_pred -------ccceeeeehhhhhhHHHHHHhcCCCCC-CHHHHHHHHHHHHHHHHHHHh-CCeeeccCChhheeeccCCcCce
Confidence 45999999999 689999999988764 345577789999999999996 999999999999999754 469
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~ 243 (771)
|++|||.++..... -|.++....|+|||++.+ ..|+.++|||||||+++||++|.++|..
T Consensus 331 KVIDFGSSc~~~q~---------vytYiQSRfYRAPEVILG------lpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 331 KVIDFGSSCFESQR---------VYTYIQSRFYRAPEVILG------LPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred eEEecccccccCCc---------ceeeeeccccccchhhcc------CCCCCccceeehhhhHHhHhcCccccCC
Confidence 99999999877542 235677789999999998 4788999999999999999999998753
No 37
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=9.9e-33 Score=294.70 Aligned_cols=243 Identities=19% Similarity=0.261 Sum_probs=185.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECC-CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC---CCCCeeEEeeeEEecccC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKD-DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV---RHPNILAFLHSTEVENID 94 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~-~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L---rHPnIlkv~d~~e~e~~d 94 (771)
+|++.+.||.|+ | +||+|++.. +|..|+||++......+.....+.+|+..++.+ +||||+++++++.....+
T Consensus 2 ~Y~~~~~lg~G~~g--~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 2 QYECVAEIGEGAYG--KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CcceeeEeccCCCe--EEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 599999999998 8 999999854 468899999986544333333455666666655 699999999998632211
Q ss_pred cCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
....+|+|||++ ++|.+++....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 80 ---~~~~~~lv~e~~~~~l~~~~~~~~~~~-~~~~~~~~i~~qi~~aL~~lH~-~~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 80 ---RETKLTLVFEHVDQDLTTYLDKVPEPG-VPTETIKDMMFQLLRGLDFLHS-HRVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred ---CCCcEEEEEccCCCCHHHHHHhCCCCC-CCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEEcCCCCEEEccc
Confidence 134799999999 67888887643222 2344567779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h--
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R-- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~-- 247 (771)
|++....... ......++..|+|||++.+ ..++.++|+|||||++|||++|.++|..... .
T Consensus 155 g~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i 221 (290)
T cd07862 155 GLARIYSFQM-------ALTSVVVTLWYRAPEVLLQ------SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI 221 (290)
T ss_pred cceEeccCCc-------ccccccccccccChHHHhC------CCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHH
Confidence 9987654321 0112234558999999865 3566789999999999999999988753210 0
Q ss_pred ---------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 ---------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ---------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++.+||+.+|++||++.++++|++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~ 289 (290)
T cd07862 222 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 289 (290)
T ss_pred HHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCC
Confidence 00235566789999999999999999999999844
No 38
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=8.8e-33 Score=294.58 Aligned_cols=243 Identities=19% Similarity=0.256 Sum_probs=187.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC---CCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV---RHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L---rHPnIlkv~d~~e~e~~d~ 95 (771)
+|++.+.||.|+ | +||+|+++.+|+.|+||.+......+.....+.+|+..+++| +||||+++++++.....+
T Consensus 1 ~y~~~~~lg~g~~g--~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~- 77 (288)
T cd07863 1 QYEPVAEIGVGAYG--TVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTD- 77 (288)
T ss_pred CceEeeEEeecCCe--EEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCC-
Confidence 599999999998 8 999999999999999999986543332233455677666665 699999999998753221
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
....+|+|+|++ ++|..++....... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 78 --~~~~~~lv~e~~~~~l~~~~~~~~~~~-~~~~~~~~~~~qi~~al~~lH~-~~ivH~dikp~Nili~~~~~~kl~dfg 153 (288)
T cd07863 78 --RETKVTLVFEHVDQDLRTYLDKVPPPG-LPAETIKDLMRQFLRGLDFLHA-NCIVHRDLKPENILVTSGGQVKLADFG 153 (288)
T ss_pred --CCceEEEEEcccccCHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCCEEECccC
Confidence 134789999999 57888887643221 2345577789999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h---
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R--- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~--- 247 (771)
++........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|.++|..... .
T Consensus 154 ~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~ 220 (288)
T cd07863 154 LARIYSCQMA-------LTPVVVTLWYRAPEVLLQ------STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 220 (288)
T ss_pred ccccccCccc-------CCCccccccccCchHhhC------CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHH
Confidence 9876543211 111233458999999865 3567899999999999999999988743210 0
Q ss_pred --------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 --------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 --------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++.+||..||.+||++.+++.|++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~ 287 (288)
T cd07863 221 DLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPF 287 (288)
T ss_pred HHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence 01235666789999999999999999999999844
No 39
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-33 Score=302.92 Aligned_cols=238 Identities=19% Similarity=0.206 Sum_probs=188.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCc-EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSP-VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~-VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+..+.+.+|.|+ | +||+|.++ |+. |+||++......+...+.+++|+.+|.+|+|||||++++++....
T Consensus 42 ~l~~~~~iG~G~~g--~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~----- 112 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFG--TVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPP----- 112 (362)
T ss_pred HhhhhhhcccCCce--eEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-----
Confidence 355667799998 8 99999997 666 999999876555444778999999999999999999999997632
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC-ceecCCCCCCEEEcCCC-cEEEEcc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK-LVHGNVCLSSVVVTQTL-DWKLHAF 173 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~-ivH~dIkp~NI~v~~~G-~~KL~dF 173 (771)
..++|||||+ ++|..+|..... .......+..++.||+.||.|||+ ++ |||||||++||+|+.++ .+||+||
T Consensus 113 --~~~~iVtEy~~~GsL~~~l~~~~~-~~l~~~~~l~~aldiArGm~YLH~-~~~iIHrDLK~~NiLv~~~~~~~KI~DF 188 (362)
T KOG0192|consen 113 --GSLCIVTEYMPGGSLSVLLHKKRK-RKLPLKVRLRIALDIARGMEYLHS-EGPIIHRDLKSDNILVDLKGKTLKIADF 188 (362)
T ss_pred --CceEEEEEeCCCCcHHHHHhhccc-CCCCHHHHHHHHHHHHHHHHHHhc-CCCeeecccChhhEEEcCCCCEEEECCC
Confidence 1589999999 689999977411 111222334459999999999997 78 99999999999999998 9999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------ 247 (771)
|+++....... . .....++..|||||++.+. ...++.++|+||||+++|||++|..||......
T Consensus 189 Glsr~~~~~~~----~--~~~~~GT~~wMAPEv~~~~----~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v 258 (362)
T KOG0192|consen 189 GLSREKVISKT----S--MTSVAGTYRWMAPEVLRGE----KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAV 258 (362)
T ss_pred ccceeeccccc----c--ccCCCCCccccChhhhcCC----CCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 99987764310 0 1112344589999999853 256889999999999999999999888543211
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....|+.+..++.+|++.+|..||+..+++..
T Consensus 259 ~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~ 299 (362)
T KOG0192|consen 259 VVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSR 299 (362)
T ss_pred HhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHH
Confidence 113377789999999999999999999988754
No 40
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=286.20 Aligned_cols=243 Identities=16% Similarity=0.225 Sum_probs=199.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
....|++-+.||.|. + .||++.++.+|+.+++|+++.+.......+.+.+|+++.+.|+||||+++++.+..+.
T Consensus 9 f~d~y~l~e~igkG~FS--vVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~--- 83 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFS--VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES--- 83 (355)
T ss_pred cchhhhHHHHHccCchH--HHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccc---
Confidence 566799999999998 7 8999999999999999999876555556788999999999999999999999998754
Q ss_pred CCcccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC---CcEEE
Q 004157 96 TSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT---LDWKL 170 (771)
Q Consensus 96 ~~~~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~---G~~KL 170 (771)
..|||+|+|. .|..-|-.+.. ..+-.....+.||+.||.|+|. ++|||||+||+|+++-.. .-+||
T Consensus 84 -----~~ylvFe~m~G~dl~~eIV~R~~---ySEa~aSH~~rQiLeal~yCH~-n~IvHRDvkP~nllLASK~~~A~vKL 154 (355)
T KOG0033|consen 84 -----FHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILEALAYCHS-NGIVHRDLKPENLLLASKAKGAAVKL 154 (355)
T ss_pred -----eeEEEEecccchHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHh-cCceeccCChhheeeeeccCCCceee
Confidence 8899999993 56654443321 1222245559999999999995 999999999999999643 44999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---- 246 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---- 246 (771)
+|||++..+.+. ....++.+.+.|++||+++. ..++..+|||+.|+++|-|+.|.+||..++.
T Consensus 155 ~~FGvAi~l~~g-------~~~~G~~GtP~fmaPEvvrk------dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rly 221 (355)
T KOG0033|consen 155 ADFGLAIEVNDG-------EAWHGFAGTPGYLSPEVLKK------DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY 221 (355)
T ss_pred cccceEEEeCCc-------cccccccCCCcccCHHHhhc------CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHH
Confidence 999999988732 12345567789999999987 4788899999999999999999999876321
Q ss_pred ------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 ------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 ------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
+....|.++..+++++||..||.+|+|+.+.|+|+|..+.
T Consensus 222 e~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 222 EQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNR 273 (355)
T ss_pred HHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence 1335788889999999999999999999999999766544
No 41
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9.4e-33 Score=301.77 Aligned_cols=241 Identities=16% Similarity=0.164 Sum_probs=194.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|+ | .||+++++.+|..|++|++.... .......+.+|+++|++++||||+++++++..+
T Consensus 3 ~~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 75 (331)
T cd06649 3 KDDDFERISELGAGNGG--VVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD---- 75 (331)
T ss_pred CcccceEEEeecCCCCE--EEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC----
Confidence 466899999999998 8 99999999999999999998643 234456788999999999999999999999864
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|.+++..... .....+..++.|++.||.|||+..+++||||||+||+++.+|.+||+||
T Consensus 76 ----~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Df 148 (331)
T cd06649 76 ----GEISICMEHMDGGSLDQVLKEAKR---IPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDF 148 (331)
T ss_pred ----CEEEEEeecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccC
Confidence 3899999999 579999877543 2344566779999999999997557999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------ 247 (771)
|++....... .....++..|+|||++.+ ..++.++|+|||||++|||++|..||......
T Consensus 149 g~~~~~~~~~--------~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~ 214 (331)
T cd06649 149 GVSGQLIDSM--------ANSFVGTRSYMSPERLQG------THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIF 214 (331)
T ss_pred cccccccccc--------cccCCCCcCcCCHhHhcC------CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh
Confidence 9987654311 111234558999999876 35678999999999999999999887421100
Q ss_pred ------------------------------------------------------ccCCCCcchHHHHHHHhccCCCCCCC
Q 004157 248 ------------------------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLN 273 (771)
Q Consensus 248 ------------------------------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps 273 (771)
....++..+.+++.+||..||++||+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt 294 (331)
T cd06649 215 GRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERAD 294 (331)
T ss_pred cccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCC
Confidence 00124567889999999999999999
Q ss_pred hHHHhhCCCCCcc
Q 004157 274 SSKLIENSEYFQN 286 (771)
Q Consensus 274 ~~~lL~~~~fF~n 286 (771)
+.++++| +||+.
T Consensus 295 ~~ell~h-~~~~~ 306 (331)
T cd06649 295 LKMLMNH-TFIKR 306 (331)
T ss_pred HHHHhcC-hHHhh
Confidence 9999998 55543
No 42
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.7e-33 Score=304.99 Aligned_cols=238 Identities=15% Similarity=0.241 Sum_probs=194.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | .||+|+++.+|+.|+||++.+.... ......+.+|+++++.++||||+++++.++..
T Consensus 2 ~y~~~~~ig~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~------ 73 (333)
T cd05600 2 DFQILTQVGQGGYG--QVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDD------ 73 (333)
T ss_pred CcEEEEEEeecCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcC------
Confidence 599999999998 8 9999999999999999999864222 13455678899999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++||||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~g~~L~~~l~~~~~l---~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~kL~Dfg~ 147 (333)
T cd05600 74 --EYLYLAMEYVPGGDFRTLLNNLGVL---SEDHARFYMAEMFEAVDALHE-LGYIHRDLKPENFLIDASGHIKLTDFGL 147 (333)
T ss_pred --CEEEEEEeCCCCCCHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECCCCCEEEEeCcC
Confidence 4899999999 5799999765432 234456669999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc-------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------- 248 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~------- 248 (771)
+...... .....++..|+|||++.+ ..++.++|+|||||++|||++|..||.......
T Consensus 148 a~~~~~~---------~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~ 212 (333)
T cd05600 148 SKGIVTY---------ANSVVGSPDYMAPEVLRG------KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKY 212 (333)
T ss_pred Ccccccc---------cCCcccCccccChhHhcC------CCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHh
Confidence 8765431 112234568999999876 356789999999999999999999885432110
Q ss_pred -------c------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcch
Q 004157 249 -------T------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNK 287 (771)
Q Consensus 249 -------~------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~ 287 (771)
. ..++..+.+++.+||..+|.+|+++.++++| +||.+.
T Consensus 213 ~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h-~~~~~~ 263 (333)
T cd05600 213 WKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH-PFFKEV 263 (333)
T ss_pred ccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC-cccCCC
Confidence 0 1346778999999999999999999999998 666653
No 43
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.4e-33 Score=305.64 Aligned_cols=260 Identities=20% Similarity=0.224 Sum_probs=212.6
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|..++.+|.|. | .++..+++.++..|++|++......+.....+.+|+..+++++||||+.++|.|+.++
T Consensus 4 ~~Ye~~~~iG~GafG--~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~----- 76 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFG--SALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG----- 76 (426)
T ss_pred chhhhhhhcCccccc--hhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCC-----
Confidence 4699999999999 8 7888888999999999999987777766778999999999999999999999999753
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+||||||| ++|.+.|++.+.. ...++.|.+.+.|++.|+.|||+ .+|+|||||+.|||++.++.+||+|||+
T Consensus 77 --~~l~Ivm~Y~eGg~l~~~i~~~k~~-~f~E~~i~~~~~Q~~~av~ylH~-~~iLHRDlK~~Nifltk~~~VkLgDfGl 152 (426)
T KOG0589|consen 77 --QLLCIVMEYCEGGDLAQLIKEQKGV-LFPEERILKWFVQILLAVNYLHE-NRVLHRDLKCANIFLTKDKKVKLGDFGL 152 (426)
T ss_pred --ceEEEEEeecCCCCHHHHHHHHhhc-cccHHHHHHHHHHHHHHHHHHHh-hhhhcccchhhhhhccccCceeecchhh
Confidence 3599999999 5799999887622 23345567779999999999995 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT------ 249 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~------ 249 (771)
++.+..... .....++++.|+.||++.+ ..|..++|||||||++|||++-++.|...++..+
T Consensus 153 aK~l~~~~~------~a~tvvGTp~YmcPEil~d------~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~ 220 (426)
T KOG0589|consen 153 AKILNPEDS------LASTVVGTPYYMCPEILSD------IPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINR 220 (426)
T ss_pred hhhcCCchh------hhheecCCCcccCHHHhCC------CCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhh
Confidence 998876321 2334466679999999987 5888999999999999999999999987664322
Q ss_pred ---CCC----CcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhhhhhhhhhhhccCC
Q 004157 250 ---ASI----PKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNLKD 302 (771)
Q Consensus 250 ---~~I----P~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv~~~~~L~~l~~k~ 302 (771)
..+ ..++..++..||..+|..||++.++|.+ +......++....+..+....
T Consensus 221 ~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~-P~l~~~~~~~~~~~~~~~~~~ 279 (426)
T KOG0589|consen 221 GLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR-PHLLRYLVESQELETSIELPT 279 (426)
T ss_pred ccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC-hhhhhHHHhhhccccccccCC
Confidence 233 3568888999999999999999999998 444433444444444444433
No 44
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.5e-33 Score=308.73 Aligned_cols=237 Identities=15% Similarity=0.171 Sum_probs=187.4
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
+...+|++.+.||.|+ | .||.+.++.+++.|+||.... ..+.+|+++|++|+||||+++++++...
T Consensus 89 ~~~~~y~~~~~lg~G~~g--~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~HpnIv~~~~~~~~~--- 155 (391)
T PHA03212 89 IEKAGFSILETFTPGAEG--FAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINHPSIIQLKGTFTYN--- 155 (391)
T ss_pred cccCCcEEEEEEcCCCCe--EEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCCCCCCCEeEEEEEC---
Confidence 3446799999999998 8 999999999999999997532 2467899999999999999999999863
Q ss_pred cCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...|+|+|++ ++|..++...... ....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+||
T Consensus 156 -----~~~~lv~e~~~~~L~~~l~~~~~l---~~~~~~~i~~qi~~aL~ylH~-~~IvHrDiKP~NIll~~~~~vkL~DF 226 (391)
T PHA03212 156 -----KFTCLILPRYKTDLYCYLAAKRNI---AICDILAIERSVLRAIQYLHE-NRIIHRDIKAENIFINHPGDVCLGDF 226 (391)
T ss_pred -----CeeEEEEecCCCCHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHhEEEcCCCCEEEEeC
Confidence 4889999999 5788887664322 233456679999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCC-Chhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS-KTEE------- 245 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~-~~~~------- 245 (771)
|++........ .....+.++..|+|||++.+ ..++.++|+|||||++|||++|..++ ....
T Consensus 227 G~a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~ 295 (391)
T PHA03212 227 GAACFPVDINA-----NKYYGWAGTIATNAPELLAR------DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDS 295 (391)
T ss_pred Ccccccccccc-----cccccccCccCCCChhhhcC------CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCch
Confidence 99865432110 01123445668999999876 35678999999999999999997543 1100
Q ss_pred -------------------------h---------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 246 -------------------------L---------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 246 -------------------------l---------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
+ .....+|..+.+++.+||+.+|.+||++.++|+
T Consensus 296 ~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 296 DRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred hHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0 001235667889999999999999999999999
Q ss_pred CCCCCcc
Q 004157 280 NSEYFQN 286 (771)
Q Consensus 280 ~~~fF~n 286 (771)
| +||+.
T Consensus 376 h-p~f~~ 381 (391)
T PHA03212 376 F-AAFQD 381 (391)
T ss_pred C-hhhcc
Confidence 8 45543
No 45
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.2e-32 Score=302.12 Aligned_cols=244 Identities=19% Similarity=0.253 Sum_probs=190.5
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.-+|++.+.||.|+ | +||.++++.+|..|+||++............+.+|+.+++.++||||+++++++......
T Consensus 20 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-- 95 (359)
T cd07876 20 LKRYQQLKPIGSGAQG--IVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSL-- 95 (359)
T ss_pred hhceEEEEEeecCCCE--EEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCc--
Confidence 35799999999998 8 999999999999999999976544444566778999999999999999999998653210
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.....+|+||||+ +.|...+... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 96 ~~~~~~~lv~e~~~~~l~~~~~~~-----~~~~~~~~~~~qi~~~L~~LH~-~~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 96 EEFQDVYLVMELMDANLCQVIHME-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred cccceeEEEEeCCCcCHHHHHhcc-----CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCCCEEEecCCC
Confidence 0123689999999 5676666432 2234466779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------- 246 (771)
+....... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+.
T Consensus 170 a~~~~~~~-------~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~ 236 (359)
T cd07876 170 ARTACTNF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIE 236 (359)
T ss_pred ccccccCc-------cCCCCcccCCCCCchhccC------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 87543311 0112234558999999876 3567789999999999999999988853210
Q ss_pred -----------------h----cc------------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 247 -----------------R----NT------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 247 -----------------~----~~------------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
. .. ...+..+.+++.+||..+|.+||++.++++|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 316 (359)
T cd07876 237 QLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP 316 (359)
T ss_pred hcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 0 00 01234578999999999999999999999994
Q ss_pred CCCc
Q 004157 282 EYFQ 285 (771)
Q Consensus 282 ~fF~ 285 (771)
||.
T Consensus 317 -~~~ 319 (359)
T cd07876 317 -YIT 319 (359)
T ss_pred -hhh
Confidence 443
No 46
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.4e-32 Score=312.11 Aligned_cols=247 Identities=16% Similarity=0.272 Sum_probs=189.0
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+..+|++++.||.|+ | +||+|+++.+++.||||++.... ....+|+.+|+.++||||+++++++..+..+.
T Consensus 64 ~~~~y~~~~~LG~G~fg--~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~ 135 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFG--VVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECFKK 135 (440)
T ss_pred cCCeEEEeEEEEeCCCE--EEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeeccccc
Confidence 456799999999998 8 99999999999999999986431 12457999999999999999999875432111
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-cEEEEc
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHA 172 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G-~~KL~d 172 (771)
......+|+||||+ ++|.+++..... ........+..+++||+.||.|||+ .+|+||||||+||+++.++ .+||+|
T Consensus 136 ~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~-~~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 136 NEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS-KFICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred CCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCEecCCcCHHHEEEcCCCCceeeec
Confidence 11133678999999 577777764321 1223344566778999999999996 8999999999999999665 699999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hhc
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN 248 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~~ 248 (771)
||+++....... .....++..|+|||++.+. ..++.++|+|||||++|||++|.+||.... +..
T Consensus 215 FGla~~~~~~~~-------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~ 282 (440)
T PTZ00036 215 FGSAKNLLAGQR-------SVSYICSRFYRAPELMLGA-----TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVR 282 (440)
T ss_pred cccchhccCCCC-------cccCCCCcCccCHHHhcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 999987643211 1123455689999997653 356789999999999999999999885421 000
Q ss_pred -------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 249 -------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 249 -------------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....|..+.+++.+||..+|.+|+++.++++| +||.
T Consensus 283 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h-p~f~ 355 (440)
T PTZ00036 283 IIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD-PFFD 355 (440)
T ss_pred HHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC-hhHH
Confidence 01245678899999999999999999999998 5664
No 47
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.2e-32 Score=295.49 Aligned_cols=243 Identities=17% Similarity=0.269 Sum_probs=191.0
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
-..|++.+.||.|+ | +||+|+++.+++.|+||++....... ....+.+|++++++++||||+++++++..+
T Consensus 5 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 76 (309)
T cd07872 5 METYIKLEKLGEGTYA--TVFKGRSKLTENLVALKEIRLEHEEG-APCTAIREVSLLKDLKHANIVTLHDIVHTD----- 76 (309)
T ss_pred CCceEEEEEecccCCE--EEEEEEecCCCCeEEEEEeeccccCC-cchhHHHHHHHHHhCCCCCcceEEEEEeeC-----
Confidence 35699999999998 8 99999999999999999998643322 234567899999999999999999999864
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|..++...... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 77 ---~~~~lv~e~~~~~l~~~~~~~~~~--~~~~~~~~~~~qi~~aL~~lH~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 150 (309)
T cd07872 77 ---KSLTLVFEYLDKDLKQYMDDCGNI--MSMHNVKIFLYQILRGLAYCHR-RKVLHRDLKPQNLLINERGELKLADFGL 150 (309)
T ss_pred ---CeEEEEEeCCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEECcccc
Confidence 3899999999 5788777654321 2234455668999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+......... ......+..|+|||++.+. ..++.++|+|||||++|+|++|.+||......
T Consensus 151 ~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 219 (309)
T cd07872 151 ARAKSVPTKT------YSNEVVTLWYRPPDVLLGS-----SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFR 219 (309)
T ss_pred ceecCCCccc------cccccccccccCCHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 8764332110 1112335589999987653 34567899999999999999999887432110
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+|+++.++++| +||+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h-~~~~~ 291 (309)
T cd07872 220 LLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH-AYFRS 291 (309)
T ss_pred HhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC-hhhhh
Confidence 012356678899999999999999999999998 56654
No 48
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=6.2e-33 Score=304.74 Aligned_cols=245 Identities=16% Similarity=0.242 Sum_probs=194.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.||.|+ | +||+|+++.+|+.|+||++.+..... .....+++|+++++.++||||+++++.++.+
T Consensus 2 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------ 73 (350)
T cd05573 2 DFEVIKVIGRGAFG--EVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDE------ 73 (350)
T ss_pred CceEEEEEEeCCcE--EEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecC------
Confidence 599999999998 8 99999999999999999998643222 3456788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~i~~qi~~aL~~LH~-~giiH~Dlkp~NIll~~~~~~kL~Dfg~ 147 (350)
T cd05573 74 --EHLYLVMEYMPGGDLMNLLIRKDV---FPEETARFYIAELVLALDSVHK-LGFIHRDIKPDNILIDADGHIKLADFGL 147 (350)
T ss_pred --CeEEEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCCCEEeecCCC
Confidence 4899999999 579998877632 2344566779999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCCC-----------------------CCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHH
Q 004157 176 LSEFDGNNEAA-----------------------NGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (771)
Q Consensus 176 a~~~~~~~~~~-----------------------~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~ 232 (771)
+.......... ..........++..|+|||++.+ ..++.++|+|||||++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlG~il~ 221 (350)
T cd05573 148 CKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG------TPYGLECDWWSLGVILY 221 (350)
T ss_pred CccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcC------CCCCCceeeEecchhhh
Confidence 98665432000 00001112234458999999876 36778999999999999
Q ss_pred HHhhCCCCCChhhh-------h---------ccCCCCcchHHHHHHHhccCCCCCCC-hHHHhhCCCCCcc
Q 004157 233 ELFSGMRLSKTEEL-------R---------NTASIPKSLLPDYQRLLSSMPSRRLN-SSKLIENSEYFQN 286 (771)
Q Consensus 233 el~~g~~p~~~~~l-------~---------~~~~IP~~l~~~i~~lL~~~P~~Rps-~~~lL~~~~fF~n 286 (771)
||++|..||..... . ....++..+.+++.+||. +|..|++ +.++++| +||.+
T Consensus 222 ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h-p~~~~ 290 (350)
T cd05573 222 EMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH-PFFKG 290 (350)
T ss_pred hhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC-CCcCC
Confidence 99999998854221 0 112357888999999997 9999999 9999998 56654
No 49
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.2e-32 Score=305.84 Aligned_cols=247 Identities=18% Similarity=0.237 Sum_probs=191.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++++.||.|+ | +||+|.++.+|+.|+||++............+.+|+++|+.++||||++++++++..+.+ .
T Consensus 1 ~~~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---~ 75 (372)
T cd07853 1 DVEPDRPIGYGAFG--VVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHID---P 75 (372)
T ss_pred CCcccceeeeCCCE--EEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCcc---c
Confidence 488999999998 8 999999999999999999875433334456788999999999999999999999764311 1
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...+|+||||+ .+|...+..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.
T Consensus 76 ~~~~~lv~e~~~~~l~~~~~~~~~---l~~~~~~~~~~qi~~aL~~LH~-~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~ 151 (372)
T cd07853 76 FEEIYVVTELMQSDLHKIIVSPQP---LSSDHVKVFLYQILRGLKYLHS-AGILHRDIKPGNLLVNSNCVLKICDFGLAR 151 (372)
T ss_pred cceEEEEeeccccCHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCChHHEEECCCCCEEecccccee
Confidence 23789999999 567777755432 2344567779999999999996 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---------- 247 (771)
........ .......+..|+|||++.+. ..++.++|+|||||++|||++|..||......
T Consensus 152 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~ 221 (372)
T cd07853 152 VEEPDESK-----HMTQEVVTQYYRAPEILMGS-----RHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLL 221 (372)
T ss_pred ecccCccc-----cCCCCCcCCCcCCHHHHcCC-----CCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHc
Confidence 65432110 01112345589999998753 34567899999999999999999887432100
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....+..+.+++.+||+.||.+||++.++++| +||..
T Consensus 222 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h-p~~~~ 293 (372)
T cd07853 222 GTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH-PYLDE 293 (372)
T ss_pred CCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC-HhhCC
Confidence 001235567889999999999999999999999 45543
No 50
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.4e-32 Score=291.93 Aligned_cols=240 Identities=15% Similarity=0.213 Sum_probs=190.0
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
|++.+.||.|+ | +||+|.++.+|+.|+||++.+..... .....+.+|++++++++||||+++++.+...
T Consensus 2 f~~~~~lg~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~------- 72 (285)
T cd05631 2 FRHYRVLGKGGFG--EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETK------- 72 (285)
T ss_pred ceEEEEEecCCCE--EEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccC-------
Confidence 78889999998 8 99999999999999999998643222 2334577899999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|..++....... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 73 -~~~~lv~e~~~~g~L~~~~~~~~~~~-~~~~~~~~~~~qi~~~l~~lH~-~~iiH~dikp~Nill~~~~~~kl~Dfg~~ 149 (285)
T cd05631 73 -DALCLVLTIMNGGDLKFHIYNMGNPG-FDEQRAIFYAAELCCGLEDLQR-ERIVYRDLKPENILLDDRGHIRISDLGLA 149 (285)
T ss_pred -CeEEEEEEecCCCcHHHHHHhhCCCC-CCHHHHHHHHHHHHHHHHHHHh-CCEEeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 4899999999 57887776533211 2334456668999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-------hh--
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------LR-- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-------l~-- 247 (771)
........ .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.... ..
T Consensus 150 ~~~~~~~~-------~~~~~g~~~y~aPE~~~~------~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~ 216 (285)
T cd05631 150 VQIPEGET-------VRGRVGTVGYMAPEVINN------EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRR 216 (285)
T ss_pred EEcCCCCe-------ecCCCCCCCccCHhhhcC------CCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHH
Confidence 76543110 112234568999999876 356789999999999999999999885321 10
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcc
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQN 286 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n 286 (771)
....++..+..++++||+.+|.+|++ ++++++| +||.+
T Consensus 217 ~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h-~~~~~ 266 (285)
T cd05631 217 VKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH-PIFKN 266 (285)
T ss_pred hhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC-HhhcC
Confidence 11346778899999999999999997 7899988 55644
No 51
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.1e-32 Score=300.24 Aligned_cols=238 Identities=17% Similarity=0.248 Sum_probs=186.1
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHH---hcCCCCCeeEEeeeEEecccCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRL---RTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~L---k~LrHPnIlkv~d~~e~e~~d~ 95 (771)
|++.+.||.|+ | +||+|.++.+|+.|+||++.+... .....+.+.+|++.+ +.++||||++++++++..
T Consensus 1 y~i~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~---- 74 (324)
T cd05589 1 FRCLAVLGRGHFG--KVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTE---- 74 (324)
T ss_pred CeEEEEEeecCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcC----
Confidence 78889999998 8 999999999999999999985421 112344566666554 567899999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|...+....+ ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 75 ----~~~~lv~E~~~~~~L~~~~~~~~l----~~~~~~~~~~qi~~al~~lH~-~~ivHrdlkp~Nill~~~~~~kL~Df 145 (324)
T cd05589 75 ----DHVCFVMEYAAGGDLMMHIHTDVF----SEPRAVFYAACVVLGLQYLHE-NKIVYRDLKLDNLLLDTEGFVKIADF 145 (324)
T ss_pred ----CEEEEEEcCCCCCcHHHHhhcCCC----CHHHHHHHHHHHHHHHHHHHh-CCeEecCCCHHHeEECCCCcEEeCcc
Confidence 4899999999 468777765332 334456669999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------ 247 (771)
|++........ ......+...|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 146 g~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i 213 (324)
T cd05589 146 GLCKEGMGFGD------RTSTFCGTPEFLAPEVLTE------TSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSI 213 (324)
T ss_pred cCCccCCCCCC------cccccccCccccCHhHhcC------CCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99875432111 0112234558999999876 35678899999999999999999998643211
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+|| ++.++++| +||++
T Consensus 214 ~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~-~~f~~ 262 (324)
T cd05589 214 VNDEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ-PFFRD 262 (324)
T ss_pred HhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC-CCcCC
Confidence 1235677889999999999999999 68888888 66655
No 52
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.9e-32 Score=298.35 Aligned_cols=241 Identities=16% Similarity=0.187 Sum_probs=193.1
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.++||.|+ | .||.++++.++..|++|++.... .+.....+.+|+++++.++||||++++++++.+
T Consensus 3 ~~~~y~~~~~lg~g~~g--~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 75 (333)
T cd06650 3 KDDDFEKISELGAGNGG--VVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD---- 75 (333)
T ss_pred chhhhheeccccCCCCE--EEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC----
Confidence 456899999999998 8 99999999999999999987643 233456788999999999999999999999874
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|.++++..... ....+..++.||+.||.|||+..+++||||||+||+++.+|.+||+||
T Consensus 76 ----~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Df 148 (333)
T cd06650 76 ----GEISICMEHMDGGSLDQVLKKAGRI---PEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDF 148 (333)
T ss_pred ----CEEEEEEecCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeC
Confidence 4899999999 5799999775432 334456678999999999997568999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc-----
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN----- 248 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~----- 248 (771)
|++....... .....++..|+|||++.+ ..++.++|+|||||++|++++|..||.......
T Consensus 149 g~~~~~~~~~--------~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~ 214 (333)
T cd06650 149 GVSGQLIDSM--------ANSFVGTRSYMSPERLQG------THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMF 214 (333)
T ss_pred Ccchhhhhhc--------cccCCCCccccCHHHhcC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHh
Confidence 9987653311 011234458999999876 356678999999999999999987764221000
Q ss_pred -----------------------------------------------------cCCCCcchHHHHHHHhccCCCCCCChH
Q 004157 249 -----------------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSS 275 (771)
Q Consensus 249 -----------------------------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~ 275 (771)
...++..+.+++.+||..||.+||++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ 294 (333)
T cd06650 215 GCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLK 294 (333)
T ss_pred cCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHH
Confidence 012345678899999999999999999
Q ss_pred HHhhCCCCCcc
Q 004157 276 KLIENSEYFQN 286 (771)
Q Consensus 276 ~lL~~~~fF~n 286 (771)
+++.| +||+.
T Consensus 295 ell~h-~~~~~ 304 (333)
T cd06650 295 QLMVH-AFIKR 304 (333)
T ss_pred HHhhC-HHHhc
Confidence 99998 55543
No 53
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.7e-32 Score=297.18 Aligned_cols=233 Identities=16% Similarity=0.201 Sum_probs=184.8
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
||.|+ | +||+|+++.+++.|+||++.+... .......+.+|+.+|++++||||+++++.++.+ ..+|+
T Consensus 1 lg~G~~g--~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--------~~~~l 70 (312)
T cd05585 1 IGKGSFG--KVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSP--------EKLYL 70 (312)
T ss_pred CCcCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecC--------CeEEE
Confidence 56776 7 999999999999999999975321 223456678899999999999999999998763 48999
Q ss_pred EecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCC
Q 004157 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (771)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~ 182 (771)
||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++......
T Consensus 71 v~e~~~~g~L~~~l~~~~~~---~~~~~~~~~~qi~~~l~~lH~-~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 71 VLAFINGGELFHHLQREGRF---DLSRARFYTAELLCALENLHK-FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD 146 (312)
T ss_pred EEcCCCCCcHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHeEECCCCcEEEEECcccccCccC
Confidence 99999 5798888765432 234456679999999999996 89999999999999999999999999998754321
Q ss_pred CCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------------ccC
Q 004157 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------NTA 250 (771)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------~~~ 250 (771)
... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||...... ...
T Consensus 147 ~~~------~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 214 (312)
T cd05585 147 DDK------TNTFCGTPEYLAPELLLG------HGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPD 214 (312)
T ss_pred CCc------cccccCCcccCCHHHHcC------CCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCC
Confidence 110 112234558999999876 35778999999999999999999998543221 123
Q ss_pred CCCcchHHHHHHHhccCCCCCCC---hHHHhhCCCCCcc
Q 004157 251 SIPKSLLPDYQRLLSSMPSRRLN---SSKLIENSEYFQN 286 (771)
Q Consensus 251 ~IP~~l~~~i~~lL~~~P~~Rps---~~~lL~~~~fF~n 286 (771)
.++..+.+++.+||..+|.+|++ +.++++| +||..
T Consensus 215 ~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h-p~~~~ 252 (312)
T cd05585 215 GFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH-PFFSQ 252 (312)
T ss_pred cCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC-CCcCC
Confidence 56778999999999999999974 6889998 56654
No 54
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=5.2e-32 Score=293.31 Aligned_cols=241 Identities=18% Similarity=0.269 Sum_probs=181.5
Q ss_pred CCceecCCCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
|.|+ +.+||.|+ | +||+|+++. ++..|+||.+..... ...+.+|+++|++++||||+++++.+....
T Consensus 2 ~~~~-~~~lG~G~~g--~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--- 71 (317)
T cd07868 2 FEYE-GCKVGRGTYG--HVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHA--- 71 (317)
T ss_pred cccc-ccccccCCCe--EEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecCC---
Confidence 3455 56899998 8 999999764 578999999875422 234678999999999999999999987544
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCC------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE----cC
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLE------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV----TQ 164 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v----~~ 164 (771)
...+|+||||+ ++|..++...... .......++.++.||+.||.|||+ .+++||||||+||++ +.
T Consensus 72 ---~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~-~~ivHrDlkp~Nil~~~~~~~ 147 (317)
T cd07868 72 ---DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA-NWVLHRDLKPANILVMGEGPE 147 (317)
T ss_pred ---CcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh-CCEEcCCCCHHHEEEecCCCC
Confidence 34899999999 5788777643211 113345577789999999999996 899999999999999 46
Q ss_pred CCcEEEEccCcccccCCCCCCCCCCccc-cccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh
Q 004157 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (771)
Q Consensus 165 ~G~~KL~dFgla~~~~~~~~~~~~~~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~ 243 (771)
.|.+||+|||++........ +... ....++..|+|||++.+. ..++.++|+|||||++|+|++|.+||..
T Consensus 148 ~~~~kl~DfG~a~~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 148 RGRVKIADMGFARLFNSPLK----PLADLDPVVVTFWYRAPELLLGA-----RHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cCcEEEeecCceeccCCCCc----cccccCCccccccccCCHHHcCC-----CCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 68899999999986643211 1111 122345589999998753 3467889999999999999999988742
Q ss_pred hhh-------------h---------------ccC-------------------------------CCCcchHHHHHHHh
Q 004157 244 EEL-------------R---------------NTA-------------------------------SIPKSLLPDYQRLL 264 (771)
Q Consensus 244 ~~l-------------~---------------~~~-------------------------------~IP~~l~~~i~~lL 264 (771)
.+. . ... ..+..+.+++++||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL 298 (317)
T cd07868 219 RQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLL 298 (317)
T ss_pred CcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHh
Confidence 110 0 000 01234678899999
Q ss_pred ccCCCCCCChHHHhhCCC
Q 004157 265 SSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 265 ~~~P~~Rps~~~lL~~~~ 282 (771)
..||.+|+|++++|+|++
T Consensus 299 ~~dP~~R~t~~e~l~hp~ 316 (317)
T cd07868 299 TMDPIKRITSEQAMQDPY 316 (317)
T ss_pred ccCcccCCCHHHHhcCCC
Confidence 999999999999999944
No 55
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.5e-32 Score=299.27 Aligned_cols=234 Identities=16% Similarity=0.219 Sum_probs=185.5
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iy 103 (771)
.||.|+ | +||++.++.+|..|+||++..... .......+.+|+++++.++||||+++++.++.. ..+|
T Consensus 2 ~lG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~--------~~~~ 71 (323)
T cd05595 2 LLGKGTFG--KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH--------DRLC 71 (323)
T ss_pred eeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecC--------CEEE
Confidence 578887 8 999999999999999999986422 123455677899999999999999999999864 4899
Q ss_pred EEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
|||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.....
T Consensus 72 lv~E~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 147 (323)
T cd05595 72 FVMEYANGGELFFHLSRERV---FTEERARFYGAEIVSALEYLHS-RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 147 (323)
T ss_pred EEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEEcCCCCEEecccHHhccccC
Confidence 999999 478888876542 2344466678999999999996 8999999999999999999999999999875432
Q ss_pred CCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------------cc
Q 004157 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------NT 249 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------~~ 249 (771)
... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||...... ..
T Consensus 148 ~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p 215 (323)
T cd05595 148 DGA------TMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP 215 (323)
T ss_pred CCC------ccccccCCcCcCCcccccC------CCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 111 0111234558999999875 35678999999999999999999887543211 11
Q ss_pred CCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 250 ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 250 ~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
..+++.+.+++.+||..+|.+|+ ++.++++| .||.+
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h-~~~~~ 256 (323)
T cd05595 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH-RFFLS 256 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC-CCcCC
Confidence 35677889999999999999998 89999998 56654
No 56
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1e-32 Score=302.83 Aligned_cols=239 Identities=18% Similarity=0.208 Sum_probs=192.1
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCC-CcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDG-SPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g-~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
...|++.+.||.|+ | +||+|+++.++ ..|+||++.+... .....+.+.+|+++++.++||||+++++++..+
T Consensus 29 ~~~y~~~~~ig~G~~g--~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~--- 103 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFG--RVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE--- 103 (340)
T ss_pred hhhcEEEEEEeecCCe--EEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC---
Confidence 34699999999998 8 99999876554 6899999975322 223456788999999999999999999999864
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 104 -----~~~~lv~Ey~~~g~L~~~i~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NILl~~~~~ikL~D 174 (340)
T PTZ00426 104 -----SYLYLVLEFVIGGEFFTFLRRNKRF---PNDVGCFYAAQIVLIFEYLQS-LNIVYRDLKPENLLLDKDGFIKMTD 174 (340)
T ss_pred -----CEEEEEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEccCCCHHHEEECCCCCEEEec
Confidence 4899999999 5799998765432 344456679999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----- 247 (771)
||++...... .....++..|+|||++.+ ..++.++|+|||||++|||++|.+||......
T Consensus 175 FG~a~~~~~~---------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~ 239 (340)
T PTZ00426 175 FGFAKVVDTR---------TYTLCGTPEYIAPEILLN------VGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQK 239 (340)
T ss_pred CCCCeecCCC---------cceecCChhhcCHHHHhC------CCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHH
Confidence 9998765431 112234558999999876 35678999999999999999999988543211
Q ss_pred ---c----cCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 248 ---N----TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 248 ---~----~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
. ...++..+.+++++||+.+|.+|+ ++.++++| +||++
T Consensus 240 i~~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h-p~f~~ 289 (340)
T PTZ00426 240 ILEGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH-PWFGN 289 (340)
T ss_pred HhcCCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC-CCcCC
Confidence 1 133566788999999999999996 89999998 67765
No 57
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.2e-32 Score=300.25 Aligned_cols=240 Identities=17% Similarity=0.226 Sum_probs=186.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.++||.|+ | +||+|+++.+|+.|+||++.... .+.....+.+|+++++.++||||++++++++..
T Consensus 75 ~~~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 144 (353)
T PLN00034 75 ELERVNRIGSGAGG--TVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDHN------- 144 (353)
T ss_pred HHhhhhhccCCCCe--EEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccC-------
Confidence 588899999998 8 99999999999999999997543 334456788999999999999999999999763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.... . .....+..+++||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 145 -~~~~lv~e~~~~~~L~~~~----~---~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kL~DfG~~ 215 (353)
T PLN00034 145 -GEIQVLLEFMDGGSLEGTH----I---ADEQFLADVARQILSGIAYLHR-RHIVHRDIKPSNLLINSAKNVKIADFGVS 215 (353)
T ss_pred -CeEEEEEecCCCCcccccc----c---CCHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcCCCCEEEcccccc
Confidence 4899999999 3554321 1 1233456679999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------- 246 (771)
......... .....++..|+|||++...... ....+.++|+|||||++|||++|..+|.....
T Consensus 216 ~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~-~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~ 288 (353)
T PLN00034 216 RILAQTMDP------CNSSVGTIAYMSPERINTDLNH-GAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAI 288 (353)
T ss_pred eeccccccc------ccccccCccccCcccccccccc-CcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHH
Confidence 766432110 0112344589999987542110 02334689999999999999999988852211
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 ------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....++..+.+++.+||+.+|.+||++.++++| +||..
T Consensus 289 ~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h-p~~~~ 333 (353)
T PLN00034 289 CMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH-PFILR 333 (353)
T ss_pred hccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC-ccccc
Confidence 0113467789999999999999999999999998 56654
No 58
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=3.5e-32 Score=299.97 Aligned_cols=244 Identities=17% Similarity=0.224 Sum_probs=190.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.-+|++.+.||.|+ | .||.+.++.+++.|+||++............+.+|+.+++.++||||+++++++......
T Consensus 16 ~~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-- 91 (355)
T cd07874 16 LKRYQNLKPIGSGAQG--IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSL-- 91 (355)
T ss_pred hhceeEEEEeeecCCE--EEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccc--
Confidence 34799999999998 8 999999999999999999986544445566778899999999999999999998653210
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.....+|+||||+ +.|...+... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 92 ~~~~~~~lv~e~~~~~l~~~~~~~-----l~~~~~~~~~~qi~~aL~~LH~-~givHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 92 EEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred cccceeEEEhhhhcccHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHHEEECCCCCEEEeeCcc
Confidence 1134689999999 5677666532 2234466679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
++...... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 166 ~~~~~~~~-------~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 232 (355)
T cd07874 166 ARTAGTSF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 232 (355)
T ss_pred cccCCCcc-------ccCCccccCCccCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 97654321 1112344568999999876 35678999999999999999999887532100
Q ss_pred c----------------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 248 N----------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 248 ~----------------------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
. ....+..+.+++.+||..+|.+||++.++++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h- 311 (355)
T cd07874 233 QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH- 311 (355)
T ss_pred HhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC-
Confidence 0 00112346789999999999999999999999
Q ss_pred CCCc
Q 004157 282 EYFQ 285 (771)
Q Consensus 282 ~fF~ 285 (771)
+||+
T Consensus 312 p~~~ 315 (355)
T cd07874 312 PYIN 315 (355)
T ss_pred cchh
Confidence 4543
No 59
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.2e-32 Score=304.58 Aligned_cols=245 Identities=15% Similarity=0.208 Sum_probs=192.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||+|+++.+|+.|+||++.+... .......+++|+.+|+.++||||+++++.+++.
T Consensus 2 ~y~~~~~lG~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~------ 73 (364)
T cd05599 2 DFESIKVIGRGAFG--EVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDE------ 73 (364)
T ss_pred CceEEEEEEecCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC------
Confidence 599999999998 8 999999999999999999985321 223456688999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++||||||| ++|.+++..... .....+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~~g~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~lH~-~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 147 (364)
T cd05599 74 --NYLYLIMEYLPGGDMMTLLMKKDT---FTEEETRFYIAETILAIDSIHK-LGYIHRDIKPDNLLLDAKGHIKLSDFGL 147 (364)
T ss_pred --CeEEEEECCCCCcHHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECCCCCEEEeeccc
Confidence 4899999999 579988876543 2344567779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCC-----------------C---------------ccccccccCCCCCChhccccccccccCCCCCcch
Q 004157 176 LSEFDGNNEAANG-----------------P---------------MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSID 223 (771)
Q Consensus 176 a~~~~~~~~~~~~-----------------~---------------~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~D 223 (771)
+..+......... + ...+..+++..|+|||++.. ..++.++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~D 221 (364)
T cd05599 148 CTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ------TGYNKECD 221 (364)
T ss_pred ceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC------CCCCCeee
Confidence 8765322110000 0 00111234558999999865 45778999
Q ss_pred HHHHHHHHHHHhhCCCCCChhhhh----------c------cCCCCcchHHHHHHHhccCCCCCCC---hHHHhhCCCCC
Q 004157 224 SWGLGCLIYELFSGMRLSKTEELR----------N------TASIPKSLLPDYQRLLSSMPSRRLN---SSKLIENSEYF 284 (771)
Q Consensus 224 i~SLG~li~el~~g~~p~~~~~l~----------~------~~~IP~~l~~~i~~lL~~~P~~Rps---~~~lL~~~~fF 284 (771)
+|||||++|||++|..||...... . ...+++.+.+++.+||. +|.+|++ +.++++| +||
T Consensus 222 iwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h-~~~ 299 (364)
T cd05599 222 WWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH-PFF 299 (364)
T ss_pred eecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC-CCc
Confidence 999999999999999988543211 0 11356678899999996 8999998 9999998 566
Q ss_pred cc
Q 004157 285 QN 286 (771)
Q Consensus 285 ~n 286 (771)
..
T Consensus 300 ~~ 301 (364)
T cd05599 300 KG 301 (364)
T ss_pred CC
Confidence 54
No 60
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6e-32 Score=310.11 Aligned_cols=238 Identities=18% Similarity=0.185 Sum_probs=189.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCC-CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDD-GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~-g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|.+.+.+|.|+ | .||.|.+..+ ++.|++|.+... .......+++|+++|+.++||||+++++.++.+
T Consensus 68 ~y~~~~~lg~G~~g--~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~------ 137 (478)
T PTZ00267 68 MYVLTTLVGRNPTT--AAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKSD------ 137 (478)
T ss_pred eEEEEEEEEeCCCc--EEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC------
Confidence 499999999997 7 8999999888 788999987543 233456788999999999999999999999874
Q ss_pred cccEEEEEecCC--cchHHHHHHhC-CCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~-~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
.++||||||+ ++|.++|+... .........+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 138 --~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~ivHrDlkp~NIll~~~~~~kL~DFg 214 (478)
T PTZ00267 138 --DKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS-RKMMHRDLKSANIFLMPTGIIKLGDFG 214 (478)
T ss_pred --CEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh-CCEEECCcCHHhEEECCCCcEEEEeCc
Confidence 4899999999 57998886532 11122344567779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
++......... .......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 215 la~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~ 284 (478)
T PTZ00267 215 FSKQYSDSVSL----DVASSFCGTPYYLAPELWER------KRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVL 284 (478)
T ss_pred CceecCCcccc----ccccccCCCccccCHhHhCC------CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99876542110 01112234558999999876 35678999999999999999999887543211
Q ss_pred --c----cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 --N----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 --~----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. ...++..+.+++.+||..+|..||++.+++.+
T Consensus 285 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 285 YGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred hCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 1 12456779999999999999999999999987
No 61
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.3e-32 Score=299.66 Aligned_cols=243 Identities=18% Similarity=0.229 Sum_probs=190.1
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|+ | .||.|.++.+++.|+||++............+.+|+.+++.++||||+++++++...... .
T Consensus 24 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~--~ 99 (364)
T cd07875 24 KRYQNLKPIGSGAQG--IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL--E 99 (364)
T ss_pred cceeEEEEeecCCCe--EEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccc--c
Confidence 4799999999998 8 999999999999999999986544444556778899999999999999999988643210 0
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+|+||||+ +.|...+... .....+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 100 ~~~~~~lv~e~~~~~l~~~~~~~-----~~~~~~~~~~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 100 EFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred ccCeEEEEEeCCCCCHHHHHHhc-----CCHHHHHHHHHHHHHHHHHHhh-CCeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 124689999999 5677776532 2234466779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------hc
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------RN 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------~~ 248 (771)
+...... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+. ..
T Consensus 174 ~~~~~~~-------~~~~~~~t~~y~aPE~~~~------~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~ 240 (364)
T cd07875 174 RTAGTSF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240 (364)
T ss_pred cccCCCC-------cccCCcccCCcCCHHHHhC------CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 7654321 1112344568999999876 3567899999999999999999988753210 00
Q ss_pred c----------------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 249 T----------------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 249 ~----------------------------------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
. ......+.+++.+||..||.+|||+.++|+| +
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h-p 319 (364)
T cd07875 241 LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH-P 319 (364)
T ss_pred cCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC-c
Confidence 0 0012346789999999999999999999999 4
Q ss_pred CCc
Q 004157 283 YFQ 285 (771)
Q Consensus 283 fF~ 285 (771)
||+
T Consensus 320 ~~~ 322 (364)
T cd07875 320 YIN 322 (364)
T ss_pred ccc
Confidence 553
No 62
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.4e-32 Score=298.33 Aligned_cols=234 Identities=16% Similarity=0.228 Sum_probs=185.4
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iy 103 (771)
.||.|+ | +||.+.++.+|+.|+||++.+... .......+.+|+++++.++||||+++++.++.+ ..+|
T Consensus 2 ~lG~G~~g--~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--------~~~~ 71 (328)
T cd05593 2 LLGKGTFG--KVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTK--------DRLC 71 (328)
T ss_pred eeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC--------CEEE
Confidence 577787 7 999999999999999999986422 223456678899999999999999999999863 4899
Q ss_pred EEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
|||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.....
T Consensus 72 lv~Ey~~~g~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~ 147 (328)
T cd05593 72 FVMEYVNGGELFFHLSRERV---FSEDRTRFYGAEIVSALDYLHS-GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGIT 147 (328)
T ss_pred EEEeCCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeEecccCHHHeEECCCCcEEEecCcCCccCCC
Confidence 999999 478888766542 2344456679999999999996 8999999999999999999999999999875432
Q ss_pred CCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------------cc
Q 004157 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------NT 249 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------~~ 249 (771)
... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...... ..
T Consensus 148 ~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p 215 (328)
T cd05593 148 DAA------TMKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP 215 (328)
T ss_pred ccc------ccccccCCcCccChhhhcC------CCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC
Confidence 110 0112234558999999875 35678999999999999999999988543211 11
Q ss_pred CCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 250 ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 250 ~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
..++..+.+++.+||..+|.+|+ ++.++++| .||.+
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h-~~~~~ 256 (328)
T cd05593 216 RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH-SFFTG 256 (328)
T ss_pred CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC-CCcCC
Confidence 34567789999999999999997 89999998 55644
No 63
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=7.7e-32 Score=310.07 Aligned_cols=255 Identities=19% Similarity=0.200 Sum_probs=200.3
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|+ | +||.|+++.+|+.||||++............+.+|+..+..++|+||+++++.+.......
T Consensus 30 ~~~rY~i~~~LG~G~fG--~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 30 QAKKYWISRVLGSGATG--TVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cCCCEEEEEEEecCCCE--EEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 346899999999998 8 9999999999999999999876655556677889999999999999999998876432211
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
......+|+||||+ ++|.++|+.... ........+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~-~~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS-KHMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEeCCCCEEEEe
Confidence 11122579999999 579998876432 1223344567779999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----- 247 (771)
||+++.+....... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||......
T Consensus 187 FGls~~~~~~~~~~----~~~~~~Gt~~Y~aPE~~~~------~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~ 256 (496)
T PTZ00283 187 FGFSKMYAATVSDD----VGRTFCGTPYYVAPEIWRR------KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHK 256 (496)
T ss_pred cccCeecccccccc----ccccccCCcceeCHHHhCC------CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 99987654321110 0112234558999999876 35678999999999999999999988653321
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||+.+|.+||++.++++| +++.
T Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~-p~~~ 301 (496)
T PTZ00283 257 TLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM-PICK 301 (496)
T ss_pred HhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC-HHHH
Confidence 113467789999999999999999999999998 4443
No 64
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.1e-31 Score=285.29 Aligned_cols=241 Identities=18% Similarity=0.274 Sum_probs=193.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|. | .||+|+++.+|+.|+||++......+.....+.+|+..+++++||||+++++++...
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------- 71 (286)
T cd07832 1 RYKILGRIGEGAHG--IVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHG------- 71 (286)
T ss_pred CceEEeecccCCCc--EEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecC-------
Confidence 589999999998 8 899999999999999999987654445566788999999999999999999999863
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.++|+|||++.
T Consensus 72 -~~~~~v~e~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~ 147 (286)
T cd07832 72 -SGFVLVMEYMPSDLSEVLRDEER--PLPEAQVKSYMRMLLKGVAYMHA-NGIMHRDLKPANLLISADGVLKIADFGLAR 147 (286)
T ss_pred -CeeEEEecccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCcCHHHEEEcCCCcEEEeeeeecc
Confidence 4899999999 579888876442 12344466679999999999996 899999999999999999999999999988
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----------- 246 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----------- 246 (771)
........ .......+..|+|||++.+. ..++.++|+|||||++|+|++|.+++.....
T Consensus 148 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~ 217 (286)
T cd07832 148 LFSEEEPR-----LYSHQVATRWYRAPELLYGA-----RKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTL 217 (286)
T ss_pred cccCCCCC-----ccccccCcccccCceeeecc-----ccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHc
Confidence 76542210 01112344589999987643 3456799999999999999999877643210
Q ss_pred -------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 247 -------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 247 -------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
.....++..+.+++++||+.+|.+||++.++++|++|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~ 285 (286)
T cd07832 218 GTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285 (286)
T ss_pred CCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCc
Confidence 0012456778899999999999999999999999654
No 65
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-33 Score=298.38 Aligned_cols=237 Identities=17% Similarity=0.217 Sum_probs=202.2
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+...|+..+.||.|. | .||+|.+..+++.||||+++.....+ ..+.+..|+..|..++||||.++|..+..
T Consensus 11 ~~~~~~~~~~IgrGsfG--~Vyk~~d~~t~k~vAiKii~Le~~~d-eIediqqei~~Ls~~~~~~it~yygsyl~----- 82 (467)
T KOG0201|consen 11 PELLYTKLELIGRGSFG--EVYKAIDNKTKKVVAIKIIDLEEAED-EIEDIQQEISVLSQCDSPNITEYYGSYLK----- 82 (467)
T ss_pred cccccccchhccccccc--eeeeeeeccccceEEEEEechhhcch-hhHHHHHHHHHHHhcCcchHHhhhhheee-----
Confidence 456799999999999 9 99999999999999999999875554 46778899999999999999999999987
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
++.++|+|||| +++.+.|+..... .+..|.+++++++.||.|||. .+.+|||||+.||+|...|.+||+||
T Consensus 83 ---g~~LwiiMey~~gGsv~~lL~~~~~~---~E~~i~~ilre~l~~l~ylH~-~~kiHrDIKaanil~s~~g~vkl~Df 155 (467)
T KOG0201|consen 83 ---GTKLWIIMEYCGGGSVLDLLKSGNIL---DEFEIAVILREVLKGLDYLHS-EKKIHRDIKAANILLSESGDVKLADF 155 (467)
T ss_pred ---cccHHHHHHHhcCcchhhhhccCCCC---ccceeeeehHHHHHHhhhhhh-cceecccccccceeEeccCcEEEEec
Confidence 45899999999 5788888876653 233467779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-hhhccC--
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-ELRNTA-- 250 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-~l~~~~-- 250 (771)
|++..+... ...+..+++++.|||||++++ ..|..++||||||++.+||.+|.||+... .++-+.
T Consensus 156 gVa~ql~~~------~~rr~tfvGTPfwMAPEVI~~------~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI 223 (467)
T KOG0201|consen 156 GVAGQLTNT------VKRRKTFVGTPFWMAPEVIKQ------SGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI 223 (467)
T ss_pred ceeeeeech------hhccccccccccccchhhhcc------ccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec
Confidence 999888763 233456777789999999996 57889999999999999999999987542 233222
Q ss_pred ----------CCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 251 ----------SIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 251 ----------~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...+.+.+++..||+.||+.||++.++|+|
T Consensus 224 pk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 224 PKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred cCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 344568999999999999999999999998
No 66
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.6e-32 Score=299.41 Aligned_cols=247 Identities=15% Similarity=0.153 Sum_probs=194.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||++.++.+|+.|+||++.+... .......+++|+++++.++||||+++++.++..
T Consensus 2 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~------ 73 (330)
T cd05601 2 DFDVKSLVGRGHFG--EVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDK------ 73 (330)
T ss_pred CceEEEEEEeccCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecC------
Confidence 599999999998 8 999999999999999999986432 223456788999999999999999999998863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~lH~-~~i~H~Dlkp~NIll~~~~~~kL~Dfg~ 148 (330)
T cd05601 74 --DNLYLVMEYQPGGDLLSLLNRYED--QFDEDMAQFYLAELVLAIHSVHQ-MGYVHRDIKPENVLIDRTGHIKLADFGS 148 (330)
T ss_pred --CeEEEEECCCCCCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH-CCeEcccCchHheEECCCCCEEeccCCC
Confidence 4899999999 579999877521 12344566679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h----
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R---- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~---- 247 (771)
+........ .......++..|+|||++..........++.++|+|||||++|+|++|..||..... .
T Consensus 149 a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~ 223 (330)
T cd05601 149 AARLTANKM-----VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMN 223 (330)
T ss_pred CeECCCCCc-----eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHc
Confidence 987653211 111112344589999998642111123566889999999999999999998854221 1
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++++||. +|.+|+++.+++.| +||..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h-~~~~~ 268 (330)
T cd05601 224 FQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH-PFFSK 268 (330)
T ss_pred CCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC-CCcCC
Confidence 112456778999999998 99999999999998 56654
No 67
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1e-31 Score=282.03 Aligned_cols=240 Identities=14% Similarity=0.184 Sum_probs=190.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch---hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD---GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~---~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+|++++.+|.|+ | .||.|.+..++++|+||.+....... .....+++|++++++++||||++++++++.+
T Consensus 3 ~~~~~~~lg~g~~~--~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 76 (263)
T cd06625 3 NWRRGKLLGQGAFG--RVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD---- 76 (263)
T ss_pred cccccceecCCCce--EEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC----
Confidence 599999999998 8 89999999999999999987543222 2356788999999999999999999999864
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+|+||+ +.|.+++..... .....+..+++||+.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 77 ----~~~~~v~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nilv~~~~~~~l~df 148 (263)
T cd06625 77 ----ETLSIFMEYMPGGSVKDQLKAYGA---LTETVTRKYTRQILEGVEYLHS-NMIVHRDIKGANILRDSAGNVKLGDF 148 (263)
T ss_pred ----CeEEEEEEECCCCcHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEeec
Confidence 3899999999 468888876543 2334456669999999999996 99999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------ 247 (771)
|++............ .........|+|||++.+. .++.++|+|||||++|++++|..||...+..
T Consensus 149 g~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~ 219 (263)
T cd06625 149 GASKRLQTICSSGTG---MKSVTGTPYWMSPEVISGE------GYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKI 219 (263)
T ss_pred ccceecccccccccc---ccCCCcCccccCcceeccC------CCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHH
Confidence 998765431110000 0112234589999998763 4668999999999999999999887542110
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++.+||..+|.+||++.++++|.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~ 262 (263)
T cd06625 220 ATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFF 262 (263)
T ss_pred hccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCC
Confidence 11245677889999999999999999999999854
No 68
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.6e-32 Score=298.09 Aligned_cols=242 Identities=17% Similarity=0.263 Sum_probs=189.0
Q ss_pred CceecCCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCC--chhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNA--QDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k---~~g~~VaIK~~~~~~~--~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~ 92 (771)
+|++.+.||.|+ | +||.+++. .+|..|+||++.+... .....+.+.+|+++|+.++ ||||++++++++.+
T Consensus 1 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~- 77 (332)
T cd05614 1 NFELLKVLGTGAYG--KVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTE- 77 (332)
T ss_pred CceEEEEEeecCCE--EEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecC-
Confidence 489999999998 8 88887764 5789999999975321 2234566788999999995 99999999998864
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
..+|+||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 78 -------~~~~lv~e~~~~g~L~~~l~~~~~~---~~~~~~~~~~qi~~~l~~lH~-~~ivHrDlkp~Nili~~~~~~kl 146 (332)
T cd05614 78 -------AKLHLILDYVSGGEMFTHLYQRDNF---SEDEVRFYSGEIILALEHLHK-LGIVYRDIKLENILLDSEGHVVL 146 (332)
T ss_pred -------CEEEEEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCcEecCCCHHHeEECCCCCEEE
Confidence 3899999999 5798888765432 234466679999999999996 89999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----- 245 (771)
+|||++......... ......++..|+|||++.+. ..++.++|+|||||++|||++|..||....
T Consensus 147 ~DfG~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~-----~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~ 216 (332)
T cd05614 147 TDFGLSKEFLSEEKE-----RTYSFCGTIEYMAPEIIRGK-----GGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQ 216 (332)
T ss_pred eeCcCCccccccCCC-----ccccccCCccccCHHHhcCC-----CCCCCccccccchhhhhhhhcCCCCCCCCCCCCCH
Confidence 999998765432111 11223445689999998753 235678999999999999999998884311
Q ss_pred --h-----h----ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 246 --L-----R----NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 246 --l-----~----~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
. . ....++..+.+++.+||+.+|++|+ ++.++++| +||++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h-~~~~~ 272 (332)
T cd05614 217 SEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH-PFFKG 272 (332)
T ss_pred HHHHHHHhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC-CCcCC
Confidence 0 0 0124667789999999999999999 78899998 56654
No 69
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.6e-32 Score=298.26 Aligned_cols=243 Identities=17% Similarity=0.281 Sum_probs=190.3
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|+ | +||+|.++.+++.|+||++............+.+|+++|++++||||+++++++...... .
T Consensus 15 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~ 90 (343)
T cd07878 15 ERYQNLTPVGSGAYG--SVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI--E 90 (343)
T ss_pred hhhhhheecccCCCe--EEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc--c
Confidence 4799999999998 8 999999999999999999976533333455677899999999999999999988643211 1
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+|+++|++ ++|..+++...+ ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 91 ~~~~~~~~~~~~~~~l~~~~~~~~l----~~~~~~~i~~qi~~aL~~LH~-~~ivHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 91 NFNEVYLVTNLMGADLNNIVKCQKL----SDEHVQFLIYQLLRGLKYIHS-AGIIHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred ccCcEEEEeecCCCCHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHH-CCeecccCChhhEEECCCCCEEEcCCccc
Confidence 124689999999 468777764432 344567779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h-----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~----- 247 (771)
...... .....++..|+|||++.+. ..++.++|+|||||++|+|++|..||..... .
T Consensus 166 ~~~~~~---------~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 231 (343)
T cd07878 166 RQADDE---------MTGYVATRWYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEV 231 (343)
T ss_pred eecCCC---------cCCccccccccCchHhcCC-----ccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 865431 1122445689999998652 3466789999999999999999988753210 0
Q ss_pred ----------------------cc------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ----------------------NT------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ----------------------~~------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.+ ...++.+.+++.+||..+|.+||++.++++| +||.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h-p~~~ 302 (343)
T cd07878 232 VGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH-PYFS 302 (343)
T ss_pred hCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC-cchh
Confidence 00 1223346788999999999999999999999 4553
No 70
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=8.9e-32 Score=289.45 Aligned_cols=243 Identities=19% Similarity=0.273 Sum_probs=191.4
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
-..|++.++||.|+ | .||+|+++.+++.|+||.+...... .....+.+|+++++.|+||||++++++++.+
T Consensus 5 ~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~----- 76 (301)
T cd07873 5 LETYIKLDKLGEGTYA--TVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHTE----- 76 (301)
T ss_pred ccceEEeeEeccCcCE--EEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEecC-----
Confidence 35699999999998 7 9999999999999999999754332 2234567899999999999999999999864
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 77 ---~~~~lv~e~~~~~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~lH~-~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 150 (301)
T cd07873 77 ---KSLTLVFEYLDKDLKQYLDDCGN--SINMHNVKLFLFQLLRGLNYCHR-RKVLHRDLKPQNLLINERGELKLADFGL 150 (301)
T ss_pred ---CeEEEEEeccccCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCHHHEEECCCCcEEECcCcc
Confidence 4899999999 678887765432 12344566779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+......... ......+..|+|||++.+. ..++.++|+|||||++|+|++|.++|...+..
T Consensus 151 ~~~~~~~~~~------~~~~~~~~~y~~PE~~~~~-----~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~ 219 (301)
T cd07873 151 ARAKSIPTKT------YSNEVVTLWYRPPDILLGS-----TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFR 219 (301)
T ss_pred hhccCCCCCc------ccccceeecccCcHHHhCC-----CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 8765432110 1112334589999987653 34567899999999999999999887532110
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+||++.++++| +||+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h-~~f~~ 291 (301)
T cd07873 220 ILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH-PYFHC 291 (301)
T ss_pred HcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC-ccccc
Confidence 001356677899999999999999999999998 56644
No 71
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.4e-32 Score=299.41 Aligned_cols=235 Identities=16% Similarity=0.220 Sum_probs=185.8
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iy 103 (771)
.||.|+ | +||.++++.+|+.|+||++.+... .......+.+|+++++.++||||+++++.++.. ..+|
T Consensus 2 ~lG~G~~g--~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~--------~~~~ 71 (325)
T cd05594 2 LLGKGTFG--KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH--------DRLC 71 (325)
T ss_pred eeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcC--------CEEE
Confidence 578887 8 999999999999999999986422 123345667899999999999999999999864 4899
Q ss_pred EEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
|||||+ ++|..++..... .....+..++.||+.||.|||+..+++||||||+||+++.+|.+||+|||++.....
T Consensus 72 lv~E~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~ 148 (325)
T cd05594 72 FVMEYANGGELFFHLSRERV---FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 148 (325)
T ss_pred EEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCC
Confidence 999999 478888766543 234446667999999999999647999999999999999999999999999875432
Q ss_pred CCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------------cc
Q 004157 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------NT 249 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------~~ 249 (771)
... . .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||...... ..
T Consensus 149 ~~~----~--~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p 216 (325)
T cd05594 149 DGA----T--MKTFCGTPEYLAPEVLED------NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP 216 (325)
T ss_pred CCc----c--cccccCCcccCCHHHHcc------CCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 111 0 111234558999999876 35678999999999999999999888543211 11
Q ss_pred CCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 250 ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 250 ~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
..++..+.+++.+||..+|.+|+ ++.++++| .||.+
T Consensus 217 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h-~~~~~ 257 (325)
T cd05594 217 RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH-KFFAG 257 (325)
T ss_pred CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC-CCcCC
Confidence 34677889999999999999997 89999998 56654
No 72
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=4.3e-32 Score=288.62 Aligned_cols=240 Identities=17% Similarity=0.243 Sum_probs=188.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|. | +||+|+++.+|+.|++|.+............+.+|++.++.++||||+++++++...
T Consensus 1 ~y~~~~~l~~g~~~--~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~------- 71 (284)
T cd07839 1 KYEKLEKIGEGTYG--TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSD------- 71 (284)
T ss_pred CceeEEEecccCCe--EEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccC-------
Confidence 589999999987 7 999999999999999999986544333445677899999999999999999999863
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..+|+|+||+ ++|..++..... ......+..++.||++||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 72 -~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~-~~i~H~dl~~~nil~~~~~~~~l~dfg~~~ 147 (284)
T cd07839 72 -KKLTLVFEYCDQDLKKYFDSCNG--DIDPEIVKSFMFQLLKGLAFCHS-HNVLHRDLKPQNLLINKNGELKLADFGLAR 147 (284)
T ss_pred -CceEEEEecCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHEEEcCCCcEEECccchhh
Confidence 4899999999 678877765321 13345566779999999999996 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCC-Chhhh----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS-KTEEL---------- 246 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~-~~~~l---------- 246 (771)
........ .........|+|||++.+. ..++.++|+|||||++|+|++|..|+ ...+.
T Consensus 148 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~ 216 (284)
T cd07839 148 AFGIPVRC------YSAEVVTLWYRPPDVLFGA-----KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL 216 (284)
T ss_pred ccCCCCCC------cCCCccccCCcChHHHhCC-----cccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHH
Confidence 65432110 0112334589999987653 34567899999999999999987663 21110
Q ss_pred -------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 247 -------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 247 -------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
.....++..+.+++++||..+|.+|||+.++++|+||
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 217 LGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred hCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 0012355677899999999999999999999998543
No 73
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.4e-31 Score=291.80 Aligned_cols=249 Identities=14% Similarity=0.149 Sum_probs=190.0
Q ss_pred eecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCccc
Q 004157 22 NIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 22 ~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
++.+.||.|. +.++||.++++.+|+.|+||+++.....+.....+++|+++++.++||||+++++++..+ .
T Consensus 1 ~~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--------~ 72 (327)
T cd08227 1 ELLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD--------N 72 (327)
T ss_pred ChhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC--------C
Confidence 3567889886 566999999999999999999987655555667888999999999999999999999874 4
Q ss_pred EEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 101 TIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 101 ~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
.+|+||||+ ++|.+++....... .....+.+++.||+.||.|||+ .+++||||||+||+++.+|.++++||+.+..
T Consensus 73 ~~~lv~e~~~~~~l~~~~~~~~~~~-l~~~~~~~i~~qi~~~L~~LH~-~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~ 150 (327)
T cd08227 73 ELWVVTSFMAYGSAKDLICTHFMDG-MSELAIAYILQGVLKALDYIHH-MGYVHRSVKASHILISVDGKVYLSGLRSNLS 150 (327)
T ss_pred EEEEEEeccCCCcHHHHHHhhccCC-CCHHHHHHHHHHHHHHHHHHHH-CCEecCCCChhhEEEecCCcEEEcccchhhc
Confidence 899999999 57988887643221 2345567789999999999996 8999999999999999999999999987654
Q ss_pred cCCCCCCCC--CCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc--------
Q 004157 179 FDGNNEAAN--GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (771)
Q Consensus 179 ~~~~~~~~~--~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~-------- 248 (771)
......... ... ......+..|+|||++.+.. ..++.++|+|||||++|||++|..||.......
T Consensus 151 ~~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 225 (327)
T cd08227 151 MINHGQRLRVVHDF-PKYSVKVLPWLSPEVLQQNL----QGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNG 225 (327)
T ss_pred cccccccccccccc-cccccceecccChHHhhccc----CCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcC
Confidence 432111000 000 01112334799999986531 246678999999999999999998875211000
Q ss_pred --------------------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHh
Q 004157 249 --------------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLI 278 (771)
Q Consensus 249 --------------------------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL 278 (771)
...++..+.+++.+||+.+|.+||++.+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell 305 (327)
T cd08227 226 TVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLL 305 (327)
T ss_pred CccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHh
Confidence 001234577899999999999999999999
Q ss_pred hCCCCCcc
Q 004157 279 ENSEYFQN 286 (771)
Q Consensus 279 ~~~~fF~n 286 (771)
+| +||++
T Consensus 306 ~~-p~f~~ 312 (327)
T cd08227 306 NH-SFFKQ 312 (327)
T ss_pred cC-hhhhh
Confidence 98 55544
No 74
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=4.3e-32 Score=302.43 Aligned_cols=246 Identities=11% Similarity=0.149 Sum_probs=190.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||+|+++.+++.|+||++.+... .......+++|++++++++||||+++++.+++.
T Consensus 2 ~f~~~~~LG~G~~g--~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~------ 73 (381)
T cd05626 2 MFVKIKTLGIGAFG--EVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDK------ 73 (381)
T ss_pred CceEEEEEeecCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecC------
Confidence 489999999998 8 999999999999999999986432 234566789999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++|+||||| ++|.+++...... ....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~~~~~---~e~~~~~~~~qi~~aL~~LH~-~givHrDlKp~Nili~~~~~~kL~DFGl 147 (381)
T cd05626 74 --DNLYFVMDYIPGGDMMSLLIRMEVF---PEVLARFYIAELTLAIESVHK-MGFIHRDIKPDNILIDLDGHIKLTDFGL 147 (381)
T ss_pred --CEEEEEEecCCCCcHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHh-CCeeecCCcHHHEEECCCCCEEEeeCcC
Confidence 4899999999 4799988775432 334466678999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCC-----------------------------------------CCCccccccccCCCCCChhccccccccc
Q 004157 176 LSEFDGNNEAA-----------------------------------------NGPMLQYAWLVGAQYKPVELAKSDWTAV 214 (771)
Q Consensus 176 a~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~Y~aPE~~~~~~~~~ 214 (771)
+..+....... ..........++..|+|||++.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----- 222 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR----- 222 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC-----
Confidence 86432110000 00000112234558999999875
Q ss_pred cCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------h---c------cCCCCcchHHHHHHHhc--cCCCCCCChHH
Q 004157 215 RKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------R---N------TASIPKSLLPDYQRLLS--SMPSRRLNSSK 276 (771)
Q Consensus 215 ~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------~---~------~~~IP~~l~~~i~~lL~--~~P~~Rps~~~ 276 (771)
..++.++|+|||||++|||++|..||..... . . ...++..+.+++.+|+. .++..|+++.+
T Consensus 223 -~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~ 301 (381)
T cd05626 223 -KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADD 301 (381)
T ss_pred -CCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHH
Confidence 3567899999999999999999998853221 0 0 12356678899998664 45556999999
Q ss_pred HhhCCCCCcc
Q 004157 277 LIENSEYFQN 286 (771)
Q Consensus 277 lL~~~~fF~n 286 (771)
++.| +||..
T Consensus 302 ~l~h-p~f~~ 310 (381)
T cd05626 302 IKAH-PFFSE 310 (381)
T ss_pred HhcC-cccCC
Confidence 9998 66654
No 75
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=4e-32 Score=301.59 Aligned_cols=246 Identities=14% Similarity=0.159 Sum_probs=194.3
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...|++.+.||.|+ | +||+++++.+++.|+||++.+... .......+.+|+++++.++||||++++++++++
T Consensus 42 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~---- 115 (370)
T cd05596 42 AEDFDVIKVIGRGAFG--EVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDD---- 115 (370)
T ss_pred HHHcEEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecC----
Confidence 34699999999998 8 999999999999999999975321 123345577899999999999999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.++|+||||| ++|.+++..... ...++..++.||+.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 116 ----~~~~lv~Ey~~gg~L~~~l~~~~l----~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NILl~~~~~~kL~Df 186 (370)
T cd05596 116 ----KYLYMVMEYMPGGDLVNLMSNYDI----PEKWARFYTAEVVLALDAIHS-MGFIHRDVKPDNMLLDKSGHLKLADF 186 (370)
T ss_pred ----CEEEEEEcCCCCCcHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEEcCCCCEEEEec
Confidence 4899999999 579998876543 234566668999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----hc-
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN- 248 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~~- 248 (771)
|++........ .......++..|+|||++.+... ...++.++|+|||||++|||++|..||..... ..
T Consensus 187 G~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~--~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i 259 (370)
T cd05596 187 GTCMKMDANGM-----VRCDTAVGTPDYISPEVLKSQGG--DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 259 (370)
T ss_pred cceeeccCCCc-----ccCCCCCCCcCeECHHHhccCCC--CCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHH
Confidence 99976643211 11122344568999999864210 12366799999999999999999999864321 11
Q ss_pred -----------cCCCCcchHHHHHHHhccCCCC--CCChHHHhhCCCCCcc
Q 004157 249 -----------TASIPKSLLPDYQRLLSSMPSR--RLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 -----------~~~IP~~l~~~i~~lL~~~P~~--Rps~~~lL~~~~fF~n 286 (771)
...++..+.+++++||+.+|.+ |+++.++++| +||.+
T Consensus 260 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h-~~~~~ 309 (370)
T cd05596 260 MDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH-PFFKN 309 (370)
T ss_pred HcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC-cccCC
Confidence 1245678899999999999987 9999999999 56654
No 76
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.98 E-value=8.4e-33 Score=277.14 Aligned_cols=246 Identities=17% Similarity=0.253 Sum_probs=202.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc------hhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEe
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ------DGHLAAARNGVKRLRTVR-HPNILAFLHSTEV 90 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~------~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~ 90 (771)
..|+-.+.+|.|. + +|.++.++.+|...++|+++..... ...++.-++|+.+|+++. ||+|+++.|++++
T Consensus 17 ~~y~pkeilgrgvss--~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSS--VVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred hhcChHHHhcccchh--hhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 3688888898886 5 7899999999999999999853211 144667788999999986 9999999999997
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcE
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDW 168 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~ 168 (771)
+ ..+++|+|.| +.|.++|...--..+.. ...++.|++.+++|||. .+||||||||+||+++++-++
T Consensus 95 ~--------sF~FlVFdl~prGELFDyLts~VtlSEK~---tR~iMrqlfegVeylHa-~~IVHRDLKpENILlddn~~i 162 (411)
T KOG0599|consen 95 D--------AFVFLVFDLMPRGELFDYLTSKVTLSEKE---TRRIMRQLFEGVEYLHA-RNIVHRDLKPENILLDDNMNI 162 (411)
T ss_pred c--------chhhhhhhhcccchHHHHhhhheeecHHH---HHHHHHHHHHHHHHHHH-hhhhhcccChhheeeccccce
Confidence 4 4889999999 78999998764333222 34449999999999996 899999999999999999999
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-hh-
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-EL- 246 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-~l- 246 (771)
||+|||+++.+..... -..-++++.|.|||.++..|.....+|+..+|+|++|++||.|+.|.+||... ++
T Consensus 163 ~isDFGFa~~l~~Gek-------LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQml 235 (411)
T KOG0599|consen 163 KISDFGFACQLEPGEK-------LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQML 235 (411)
T ss_pred EEeccceeeccCCchh-------HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHH
Confidence 9999999998865321 12234556999999999999887788999999999999999999999988532 21
Q ss_pred --h------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 --R------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 --~------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
+ +...|.....+++.+||..+|.+|+|+.+.|.| +||..
T Consensus 236 MLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH-pff~q 288 (411)
T KOG0599|consen 236 MLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH-PFFIQ 288 (411)
T ss_pred HHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC-hHHHH
Confidence 1 124678889999999999999999999999999 66644
No 77
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.98 E-value=2.3e-31 Score=277.97 Aligned_cols=238 Identities=16% Similarity=0.159 Sum_probs=192.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.++.|. | .||+|+++.+|+.|++|.+............+.+|+++++.++||||+++++.+...
T Consensus 1 ~~~~~~~l~~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 71 (256)
T cd08529 1 DFEILNKIGKGSFG--VVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK------- 71 (256)
T ss_pred CceEeEEecCCCCe--EEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC-------
Confidence 488889999986 6 999999999999999999986554555567788999999999999999999998863
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.+++..... .......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 72 -~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~~l~~al~~lH~-~~i~h~dl~~~nili~~~~~~~l~df~~~ 148 (256)
T cd08529 72 -GKLNIVMEYAENGDLHKLLKMQRG-RPLPEDQVWRFFIQILLGLAHLHS-KKILHRDIKSLNLFLDAYDNVKIGDLGVA 148 (256)
T ss_pred -CEEEEEEEeCCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcceEEEeCCCCEEEcccccc
Confidence 4899999999 579998877522 122344456678999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------- 247 (771)
........ ..........|+|||+..+ ..++.++|+|||||++|+|++|..||......
T Consensus 149 ~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 216 (256)
T cd08529 149 KLLSDNTN------FANTIVGTPYYLSPELCED------KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRG 216 (256)
T ss_pred eeccCccc------hhhccccCccccCHHHhcC------CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence 86654211 0111233457999999876 34667899999999999999999887543210
Q ss_pred ---c-cCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 248 ---N-TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 248 ---~-~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
. ...++..+.+++.+|++.+|++||++.++++|.
T Consensus 217 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~ 254 (256)
T cd08529 217 VFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNP 254 (256)
T ss_pred CCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCC
Confidence 0 124567899999999999999999999999984
No 78
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=6.9e-32 Score=285.26 Aligned_cols=252 Identities=15% Similarity=0.195 Sum_probs=200.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.+|.|. | +||.+..+.++..+|+|++++.... ...+.++.-|-++|+.+.||-+..+|..|+++
T Consensus 78 ~f~llk~LG~GdiG--~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~------ 149 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIG--TVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETD------ 149 (459)
T ss_pred HHHHHHHcCCCCce--eEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecc------
Confidence 588899999999 9 9999999999999999999976433 24466788899999999999999999999985
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++|+||||| ++|..+++++.. ....+..+.+++..|+.||+|||. .|||+|||||+||+|-++|.+.|.||++
T Consensus 150 --~~~cl~meyCpGGdL~~LrqkQp~-~~fse~~aRFYaAEvl~ALEYLHm-lGivYRDLKPENILvredGHIMLsDFDL 225 (459)
T KOG0610|consen 150 --KYSCLVMEYCPGGDLHSLRQKQPG-KRFSESAARFYAAEVLLALEYLHM-LGIVYRDLKPENILVREDGHIMLSDFDL 225 (459)
T ss_pred --ceeEEEEecCCCccHHHHHhhCCC-CccchhhHHHHHHHHHHHHHHHHh-hceeeccCCcceeEEecCCcEEeeeccc
Confidence 4899999999 679887776542 223455577889999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCC---------------------CCC---------------------------CC--ccccccccCCCCCChh
Q 004157 176 LSEFDGNNE---------------------AAN---------------------------GP--MLQYAWLVGAQYKPVE 205 (771)
Q Consensus 176 a~~~~~~~~---------------------~~~---------------------------~~--~~~~~~~~~~~Y~aPE 205 (771)
+........ ... .+ .....++++..|.|||
T Consensus 226 S~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPE 305 (459)
T KOG0610|consen 226 SLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPE 305 (459)
T ss_pred cccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccce
Confidence 853311000 000 00 0111233444899999
Q ss_pred ccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hhcc----------CCCCcchHHHHHHHhccCCCCC
Q 004157 206 LAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRNT----------ASIPKSLLPDYQRLLSSMPSRR 271 (771)
Q Consensus 206 ~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~~~----------~~IP~~l~~~i~~lL~~~P~~R 271 (771)
++.+ .+.+.++|.|.||+++|||+.|..||.... +.++ ..++..+.++|++||.+||.+|
T Consensus 306 vI~G------~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kR 379 (459)
T KOG0610|consen 306 VIRG------EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKR 379 (459)
T ss_pred eeec------CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhh
Confidence 9998 478899999999999999999999997543 2221 2345678999999999999999
Q ss_pred CC----hHHHhhCCCCCcchhhh
Q 004157 272 LN----SSKLIENSEYFQNKLVD 290 (771)
Q Consensus 272 ps----~~~lL~~~~fF~n~lv~ 290 (771)
+. ++++-+| +||+..-..
T Consensus 380 lg~~rGA~eIK~H-pFF~gVnWa 401 (459)
T KOG0610|consen 380 LGSKRGAAEIKRH-PFFEGVNWA 401 (459)
T ss_pred hccccchHHhhcC-ccccCCChh
Confidence 98 8888777 899764443
No 79
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.98 E-value=4.9e-32 Score=301.42 Aligned_cols=245 Identities=14% Similarity=0.220 Sum_probs=188.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.||.|+ | +||++.++.+|+.|+||++.+... .......+++|+++++.++||||+++++++++.
T Consensus 2 ~y~~~~~lG~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~------ 73 (377)
T cd05629 2 DFHTVKVIGKGAFG--EVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDA------ 73 (377)
T ss_pred CceEeEEEeecCCE--EEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC------
Confidence 599999999998 8 999999999999999999875321 223456788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++||||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~ql~~aL~~LH~-~givHrDlkp~NIll~~~~~~kl~DfGl 147 (377)
T cd05629 74 --QYLYLIMEFLPGGDLMTMLIKYDT---FSEDVTRFYMAECVLAIEAVHK-LGFIHRDIKPDNILIDRGGHIKLSDFGL 147 (377)
T ss_pred --CeeEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEECCCCCEEEeeccc
Confidence 4899999999 579988876543 2344566679999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCC-----------CCCC------------------------------ccccccccCCCCCChhccccccccc
Q 004157 176 LSEFDGNNEA-----------ANGP------------------------------MLQYAWLVGAQYKPVELAKSDWTAV 214 (771)
Q Consensus 176 a~~~~~~~~~-----------~~~~------------------------------~~~~~~~~~~~Y~aPE~~~~~~~~~ 214 (771)
++.+...... .... .......++..|+|||++.+
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----- 222 (377)
T cd05629 148 STGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ----- 222 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc-----
Confidence 8643211000 0000 00011234558999999875
Q ss_pred cCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----hc------c------CCCCcchHHHHHHHhccCCCCC---CChH
Q 004157 215 RKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN------T------ASIPKSLLPDYQRLLSSMPSRR---LNSS 275 (771)
Q Consensus 215 ~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~~------~------~~IP~~l~~~i~~lL~~~P~~R---ps~~ 275 (771)
..++.++|+|||||++|||++|.+||..... .. . ..++..+.+++.+||. +|..| +++.
T Consensus 223 -~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~ 300 (377)
T cd05629 223 -QGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAH 300 (377)
T ss_pred -CCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHH
Confidence 4577899999999999999999998853221 11 1 1345668899999997 66655 5999
Q ss_pred HHhhCCCCCcc
Q 004157 276 KLIENSEYFQN 286 (771)
Q Consensus 276 ~lL~~~~fF~n 286 (771)
+++.| +||..
T Consensus 301 ~~l~h-p~~~~ 310 (377)
T cd05629 301 EIKSH-PFFRG 310 (377)
T ss_pred HHhcC-CCcCC
Confidence 99998 56654
No 80
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.98 E-value=8.7e-32 Score=293.02 Aligned_cols=240 Identities=18% Similarity=0.233 Sum_probs=188.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~ 96 (771)
.|++.+.||.|+ | +||+|+++.+++.|+||++.+... .+........|.+++..+ +||+|++++++++..
T Consensus 1 df~~~~~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~----- 73 (323)
T cd05616 1 DFNFLMVLGKGSFG--KVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTM----- 73 (323)
T ss_pred CceEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecC-----
Confidence 488999999998 8 999999999999999999986432 223345566788888877 488999999998763
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+||||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 74 ---~~~~lv~E~~~~g~L~~~~~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 74 ---DRLYFVMEYVNGGDLMYQIQQVGRF---KEPHAVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred ---CEEEEEEcCCCCCCHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCEEecCCCHHHeEECCCCcEEEccCC
Confidence 4899999999 5788888765432 233456669999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
++........ ......++..|+|||++.+ ..++.++|+|||||++|||++|..||......
T Consensus 147 ~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~ 214 (323)
T cd05616 147 MCKENMWDGV------TTKTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 214 (323)
T ss_pred CceecCCCCC------ccccCCCChhhcCHHHhcC------CCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9875432111 0112234458999999876 35778999999999999999999998643211
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCCh-----HHHhhCCCCCcc
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENSEYFQN 286 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~-----~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+|++. .++++| .||+.
T Consensus 215 ~~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h-~~~~~ 262 (323)
T cd05616 215 EHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH-AFFRY 262 (323)
T ss_pred hCCCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC-CCcCC
Confidence 113467788999999999999999985 677777 67754
No 81
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.98 E-value=9.5e-32 Score=297.69 Aligned_cols=247 Identities=12% Similarity=0.155 Sum_probs=189.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.||.|+ | +||.|.++.+++.|+||++.+... .......+++|+.+++.++||||+++++.+++.
T Consensus 2 ~y~~~~~LG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~------ 73 (363)
T cd05628 2 DFESLKVIGRGAFG--EVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDK------ 73 (363)
T ss_pred CceEeEEEEeCCCE--EEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecC------
Confidence 589999999998 8 999999999999999999986422 123456788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+||||||| ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~lH~-~givHrDlKp~NILi~~~~~vkL~DFGl 147 (363)
T cd05628 74 --LNLYLIMEFLPGGDMMTLLMKKDT---LTEEETQFYIAETVLAIDSIHQ-LGFIHRDIKPDNLLLDSKGHVKLSDFGL 147 (363)
T ss_pred --CeEEEEEcCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeEecCCCHHHeEECCCCCEEEeeccC
Confidence 4899999999 479988876543 2344566779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCC-----------------------------CCccccccccCCCCCChhccccccccccCCCCCcchHHH
Q 004157 176 LSEFDGNNEAAN-----------------------------GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWG 226 (771)
Q Consensus 176 a~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~S 226 (771)
++.......... ........+++..|+|||++.+ ..++.++|+||
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~------~~~~~~~DvwS 221 (363)
T cd05628 148 CTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ------TGYNKLCDWWS 221 (363)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcC------CCCCCchhhhh
Confidence 876532110000 0000112244558999999876 35678999999
Q ss_pred HHHHHHHHhhCCCCCChhhh----hcc------------CCCCcchHHHHHHHhcc--CCCCCCChHHHhhCCCCCcch
Q 004157 227 LGCLIYELFSGMRLSKTEEL----RNT------------ASIPKSLLPDYQRLLSS--MPSRRLNSSKLIENSEYFQNK 287 (771)
Q Consensus 227 LG~li~el~~g~~p~~~~~l----~~~------------~~IP~~l~~~i~~lL~~--~P~~Rps~~~lL~~~~fF~n~ 287 (771)
|||++|||++|..||..... ..+ ..++..+.+++.+|+.. ++..||+++++++| +||++.
T Consensus 222 lGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h-p~f~~~ 299 (363)
T cd05628 222 LGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN-PFFEGV 299 (363)
T ss_pred hHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC-CCCCCC
Confidence 99999999999999864321 111 12445677888887642 23356899999998 677654
No 82
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.98 E-value=2.2e-32 Score=304.01 Aligned_cols=245 Identities=12% Similarity=0.187 Sum_probs=189.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||+|+++.+++.|+||++.+... .......+++|+++|+.++||||+++++.++.+
T Consensus 2 ~y~~~~~lG~G~~g--~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~------ 73 (376)
T cd05598 2 MFVKIKTIGIGAFG--EVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDK------ 73 (376)
T ss_pred CceEEEEEEeCCCe--EEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcC------
Confidence 599999999998 8 999999999999999999975321 123356688999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+||||||| ++|.+++...... ....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~~g~L~~~i~~~~~~---~~~~~~~~~~qi~~al~~lH~-~~ivHrDlkp~Nill~~~~~ikL~DFG~ 147 (376)
T cd05598 74 --DNLYFVMDYIPGGDMMSLLIRLGIF---EEDLARFYIAELTCAIESVHK-MGFIHRDIKPDNILIDRDGHIKLTDFGL 147 (376)
T ss_pred --CEEEEEEeCCCCCcHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHEEECCCCCEEEEeCCC
Confidence 4899999999 5799998775432 334456668999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCC-------------------------------------CCCccccccccCCCCCChhccccccccccCCC
Q 004157 176 LSEFDGNNEAA-------------------------------------NGPMLQYAWLVGAQYKPVELAKSDWTAVRKSP 218 (771)
Q Consensus 176 a~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~ 218 (771)
+..+....... ..........++..|+|||++.+ ..+
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~ 221 (376)
T cd05598 148 CTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR------TGY 221 (376)
T ss_pred CccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcC------CCC
Confidence 85432100000 00000011234458999999876 356
Q ss_pred CCcchHHHHHHHHHHHhhCCCCCChhhhh----------------ccCCCCcchHHHHHHHhccCCCCCC---ChHHHhh
Q 004157 219 PWSIDSWGLGCLIYELFSGMRLSKTEELR----------------NTASIPKSLLPDYQRLLSSMPSRRL---NSSKLIE 279 (771)
Q Consensus 219 ~~~~Di~SLG~li~el~~g~~p~~~~~l~----------------~~~~IP~~l~~~i~~lL~~~P~~Rp---s~~~lL~ 279 (771)
+.++|+|||||++|||++|..||...... ....++..+.+++.+|+ .+|.+|+ ++.++++
T Consensus 222 ~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 222 TQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred CcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 78999999999999999999988543210 01245667888898876 5999999 8999999
Q ss_pred CCCCCcc
Q 004157 280 NSEYFQN 286 (771)
Q Consensus 280 ~~~fF~n 286 (771)
| +||..
T Consensus 301 h-~~~~~ 306 (376)
T cd05598 301 H-PFFKG 306 (376)
T ss_pred C-CCcCC
Confidence 8 56654
No 83
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.98 E-value=5.2e-32 Score=283.22 Aligned_cols=237 Identities=22% Similarity=0.332 Sum_probs=191.0
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|++++.||+|+ | +||++.++.+++.|++|++..............+|++.+++++||||+++++++...
T Consensus 1 y~~~~~lg~G~~g--~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-------- 70 (260)
T PF00069_consen 1 YRLVKKLGSGGFG--TVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDD-------- 70 (260)
T ss_dssp EEEEEEEEEESSE--EEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEES--------
T ss_pred CEEeEEEEeCCCE--EEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccc--------
Confidence 88999999998 8 999999999999999999998765554444556699999999999999999999873
Q ss_pred cEEEEEecCC-c-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 100 ITIYIVTEPV-M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 100 ~~iyIVtE~v-~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..+|+|||++ + +|.++|..... .....+...+.||+.||.+||+ .+++|+||||+||+++.+|.++|+|||.+.
T Consensus 71 ~~~~~v~~~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~L~~Lh~-~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 71 NYLYIVMEYCPGGSLQDYLQKNKP---LSEEEILKIAYQILEALAYLHS-KGIVHRDIKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp SEEEEEEEEETTEBHHHHHHHHSS---BBHHHHHHHHHHHHHHHHHHHH-TTEEESSBSGGGEEESTTSEEEESSGTTTE
T ss_pred cccccccccccccccccccccccc---cccccccccccccccccccccc-cccccccccccccccccccccccccccccc
Confidence 4889999999 3 79999984432 2345567779999999999997 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh---h-hh------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE---E-LR------ 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~---~-l~------ 247 (771)
....... ..........|+|||+...+ ...+.++|+||||+++|+|++|..|+... + ..
T Consensus 147 ~~~~~~~------~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~ 215 (260)
T PF00069_consen 147 KLSENNE------NFNPFVGTPEYMAPEVLQQG-----KKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKIL 215 (260)
T ss_dssp ESTSTTS------EBSSSSSSGGGSCHHHHTTT-----SSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHH
T ss_pred ccccccc------cccccccccccccccccccc-----ccccccccccccccccccccccccccccccchhhhhhhhhcc
Confidence 6421110 01122334589999998721 46678999999999999999999887643 1 10
Q ss_pred ------cc---CCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 ------NT---ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ------~~---~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.. ...+..+.+++.+||+.+|++||++.++++|+|
T Consensus 216 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~ 259 (260)
T PF00069_consen 216 KRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPW 259 (260)
T ss_dssp HTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGG
T ss_pred cccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCC
Confidence 00 122378999999999999999999999999844
No 84
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.98 E-value=5.9e-32 Score=301.29 Aligned_cols=245 Identities=13% Similarity=0.195 Sum_probs=189.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||+|+++.+++.|+||++.+... .......+++|+++++.++||||+++++.+...
T Consensus 2 ~f~~~~~LG~G~~g--~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~------ 73 (382)
T cd05625 2 MFVKIKTLGIGAFG--EVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDK------ 73 (382)
T ss_pred CcEEEEEEEeCCCE--EEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeC------
Confidence 489999999998 8 999999999999999999975422 223456788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++||||||| ++|.+++.+... .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~~~~---~~e~~~~~~~~qi~~al~~lH~-~~ivHrDlKp~NILl~~~g~~kL~DFGl 147 (382)
T cd05625 74 --DNLYFVMDYIPGGDMMSLLIRMGI---FPEDLARFYIAELTCAVESVHK-MGFIHRDIKPDNILIDRDGHIKLTDFGL 147 (382)
T ss_pred --CEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCCEEEeECCC
Confidence 4899999999 479888876543 2344566679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCC-----------------------------------------CCCccccccccCCCCCChhccccccccc
Q 004157 176 LSEFDGNNEAA-----------------------------------------NGPMLQYAWLVGAQYKPVELAKSDWTAV 214 (771)
Q Consensus 176 a~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~Y~aPE~~~~~~~~~ 214 (771)
+..+....... ..........++..|+|||++.+
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----- 222 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR----- 222 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC-----
Confidence 86432110000 00000011234458999999876
Q ss_pred cCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------hc---------cCCCCcchHHHHHHHhccCCCCCCC---hH
Q 004157 215 RKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------RN---------TASIPKSLLPDYQRLLSSMPSRRLN---SS 275 (771)
Q Consensus 215 ~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------~~---------~~~IP~~l~~~i~~lL~~~P~~Rps---~~ 275 (771)
..++.++|+|||||++|||++|.+||..... .. ...++....+++.+|+ .+|.+|++ +.
T Consensus 223 -~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ 300 (382)
T cd05625 223 -TGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGAD 300 (382)
T ss_pred -CCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHH
Confidence 3677899999999999999999999864221 00 1245677888898887 49999997 89
Q ss_pred HHhhCCCCCcc
Q 004157 276 KLIENSEYFQN 286 (771)
Q Consensus 276 ~lL~~~~fF~n 286 (771)
++++| +||..
T Consensus 301 ei~~h-p~f~~ 310 (382)
T cd05625 301 EIKAH-PFFKT 310 (382)
T ss_pred HHhcC-CCcCC
Confidence 99988 56654
No 85
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.98 E-value=7.8e-32 Score=293.22 Aligned_cols=234 Identities=17% Similarity=0.234 Sum_probs=184.0
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
.||.|+ | +||+|+++.+++.|+||++.+... .+.....+.+|.++++.+ +||||++++++++.. ..+
T Consensus 2 ~lg~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~--------~~~ 71 (320)
T cd05590 2 VLGKGSFG--KVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTP--------DRL 71 (320)
T ss_pred eeeeCCCe--EEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcC--------CEE
Confidence 578887 8 999999999999999999975321 223455667788888876 699999999999863 489
Q ss_pred EEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
||||||| ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~iv~Ey~~~g~L~~~i~~~~~l---~~~~~~~~~~ql~~~L~~lH~-~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~ 147 (320)
T cd05590 72 FFVMEFVNGGDLMFHIQKSRRF---DEARARFYAAEITSALMFLHD-KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 147 (320)
T ss_pred EEEEcCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecC
Confidence 9999999 5788888765432 334456679999999999996 899999999999999999999999999987543
Q ss_pred CCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc------------
Q 004157 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------------ 248 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~------------ 248 (771)
.... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||.......
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~ 215 (320)
T cd05590 148 FNGK------TTSTFCGTPDYIAPEILQE------MLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY 215 (320)
T ss_pred cCCC------cccccccCccccCHHHHcC------CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCC
Confidence 2111 1112234558999999875 356778999999999999999999985432111
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCCh------HHHhhCCCCCcc
Q 004157 249 TASIPKSLLPDYQRLLSSMPSRRLNS------SKLIENSEYFQN 286 (771)
Q Consensus 249 ~~~IP~~l~~~i~~lL~~~P~~Rps~------~~lL~~~~fF~n 286 (771)
...++..+.+++.+||+.+|.+|+++ .++++| +||.+
T Consensus 216 ~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h-~~f~~ 258 (320)
T cd05590 216 PTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH-PFFKE 258 (320)
T ss_pred CCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC-CCcCC
Confidence 12466778999999999999999998 788888 66654
No 86
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.98 E-value=2.1e-31 Score=293.76 Aligned_cols=239 Identities=20% Similarity=0.242 Sum_probs=200.0
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVR-HPNILAFLHSTEVENID 94 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d 94 (771)
...|++++.+|.|. | .||.++.+.+|+.+|+|++.+..... ...+.+++|+++|++|. ||||+++++.|++.
T Consensus 34 ~~~Y~l~~~lG~G~Fg--~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~--- 108 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFG--VVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP--- 108 (382)
T ss_pred cccEEehhhhCCCCce--EEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC---
Confidence 34699999999999 9 99999999999999999999865433 24578999999999999 99999999999984
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC----CcE
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT----LDW 168 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~----G~~ 168 (771)
..+|||||+| +.|.+.|.... ..+......+.||+.+++|||+ .|++||||||+|+++... +.+
T Consensus 109 -----~~~~lvmEL~~GGeLfd~i~~~~----~sE~da~~~~~~il~av~~lH~-~gvvHrDlKpEN~L~~~~~~~~~~i 178 (382)
T KOG0032|consen 109 -----DSVYLVMELCEGGELFDRIVKKH----YSERDAAGIIRQILEAVKYLHS-LGVVHRDLKPENLLLASKDEGSGRI 178 (382)
T ss_pred -----CeEEEEEEecCCchHHHHHHHcc----CCHHHHHHHHHHHHHHHHHHHh-CCceeccCCHHHeeeccccCCCCcE
Confidence 4899999999 56888887762 3444456679999999999997 999999999999999643 579
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-- 246 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-- 246 (771)
|++|||++...... ......+++..|+|||++.. ..++..+||||+|+++|.|++|.+||..++-
T Consensus 179 k~~DFGla~~~~~~-------~~~~~~~Gtp~y~APEvl~~------~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~ 245 (382)
T KOG0032|consen 179 KLIDFGLAKFIKPG-------ERLHTIVGTPEYVAPEVLGG------RPYGDEVDVWSIGVILYILLSGVPPFWGETEFE 245 (382)
T ss_pred EEeeCCCceEccCC-------ceEeeecCCccccCchhhcC------CCCCcccchhHHHHHHHHHhhCCCCCcCCChhH
Confidence 99999999877651 11233455669999999986 4788899999999999999999999865441
Q ss_pred --------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 247 --------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 247 --------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
.....+...+.+++.+||..+|.+|+++.++|+|+|+.
T Consensus 246 ~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~ 297 (382)
T KOG0032|consen 246 IFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIK 297 (382)
T ss_pred HHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcccc
Confidence 11246778899999999999999999999999996543
No 87
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.98 E-value=8.8e-32 Score=298.88 Aligned_cols=247 Identities=15% Similarity=0.172 Sum_probs=192.1
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
....|++.+.||.|+ | .||+++++.+++.|++|++.+... .......+.+|+.+++.++||||+++++.++.+
T Consensus 41 ~~~~y~~~~~lG~G~fg--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~--- 115 (370)
T cd05621 41 KAEDYDVVKVIGRGAFG--EVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDD--- 115 (370)
T ss_pred CHHHCeEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC---
Confidence 345799999999998 8 999999999999999999975321 223345678899999999999999999999863
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+||||| ++|.+++..... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 116 -----~~~~lv~Ey~~gg~L~~~l~~~~~----~~~~~~~~~~qil~aL~~LH~-~~IvHrDLKp~NILl~~~~~~kL~D 185 (370)
T cd05621 116 -----KYLYMVMEYMPGGDLVNLMSNYDV----PEKWAKFYTAEVVLALDAIHS-MGLIHRDVKPDNMLLDKHGHLKLAD 185 (370)
T ss_pred -----CEEEEEEcCCCCCcHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEECCCCCEEEEe
Confidence 4899999999 579998876543 334566679999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----hc
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN 248 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~~ 248 (771)
||++........ .......++..|+|||++.+.- ....++.++|+|||||++|+|++|..||..... ..
T Consensus 186 FG~a~~~~~~~~-----~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~ 258 (370)
T cd05621 186 FGTCMKMDETGM-----VRCDTAVGTPDYISPEVLKSQG--GDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSK 258 (370)
T ss_pred cccceecccCCc-----eecccCCCCcccCCHHHHhccC--CCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999987643211 1111234556899999986520 012356799999999999999999999864321 00
Q ss_pred ------c------CCCCcchHHHHHHHhccCCCC--CCChHHHhhCCCCCcc
Q 004157 249 ------T------ASIPKSLLPDYQRLLSSMPSR--RLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 ------~------~~IP~~l~~~i~~lL~~~P~~--Rps~~~lL~~~~fF~n 286 (771)
. ..++..+.+++.+||..++.+ |+++.++++| +||++
T Consensus 259 i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h-p~~~~ 309 (370)
T cd05621 259 IMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH-PFFKN 309 (370)
T ss_pred HHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC-cccCC
Confidence 0 134566788899999865543 8999999998 56654
No 88
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.98 E-value=1.3e-31 Score=291.87 Aligned_cols=235 Identities=17% Similarity=0.275 Sum_probs=184.0
Q ss_pred CCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCC--chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 25 DPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNA--QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k---~~g~~VaIK~~~~~~~--~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+.||.|+ | +||++++. .+++.|+||++..... .......+++|+.+|+.++||||+++++.++.+
T Consensus 2 ~~lg~G~~g--~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~------- 72 (323)
T cd05584 2 KVLGKGGYG--KVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTG------- 72 (323)
T ss_pred ceeeecCCe--EEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecC-------
Confidence 5688887 7 89998864 4688999999975321 123345678899999999999999999999864
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.+++...... ....+.+++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 73 -~~~~lv~e~~~~~~L~~~~~~~~~~---~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (323)
T cd05584 73 -GKLYLILEYLSGGELFMHLEREGIF---MEDTACFYLSEISLALEHLHQ-QGIIYRDLKPENILLDAQGHVKLTDFGLC 147 (323)
T ss_pred -CeEEEEEeCCCCchHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCCCEEEeeCcCC
Confidence 3899999999 4798888765432 234456679999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------c
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------N 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------~ 248 (771)
........ ......++..|+|||++.+ ..++.++|+|||||++|||++|..||...... .
T Consensus 148 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~ 215 (323)
T cd05584 148 KESIHEGT------VTHTFCGTIEYMAPEILMR------SGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG 215 (323)
T ss_pred eecccCCC------cccccCCCccccChhhccC------CCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence 75432211 0112234558999999875 35667899999999999999999988643211 1
Q ss_pred ----cCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 249 ----TASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 249 ----~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
...++..+.+++.+||..+|.+|+ ++.++++| +||..
T Consensus 216 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h-~~~~~ 261 (323)
T cd05584 216 KLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH-PFFRH 261 (323)
T ss_pred CCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC-CCcCC
Confidence 134566788999999999999999 89999988 56654
No 89
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.98 E-value=6.8e-32 Score=293.85 Aligned_cols=234 Identities=15% Similarity=0.202 Sum_probs=180.8
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHH-HHhcCCCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVK-RLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~-~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
.||.|+ | +||+|+++.+|+.|+||++.+.... ......+.+|.. .++.++||||+++++.++.. ..+
T Consensus 2 ~lg~G~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~--------~~~ 71 (323)
T cd05575 2 VIGKGSFG--KVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTA--------DKL 71 (323)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeC--------CEE
Confidence 577887 7 9999999999999999999854221 122233344444 56889999999999999863 489
Q ss_pred EEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~ 147 (323)
T cd05575 72 YFVLDYVNGGELFFHLQRERS---FPEPRARFYAAEIASALGYLHS-LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGI 147 (323)
T ss_pred EEEEcCCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeCCCCHHHeEECCCCcEEEeccCCCcccc
Confidence 9999999 578888876543 2344456679999999999996 899999999999999999999999999987543
Q ss_pred CCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------------c
Q 004157 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------N 248 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------~ 248 (771)
.... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+.. .
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~ 215 (323)
T cd05575 148 EHSK------TTSTFCGTPEYLAPEVLRK------QPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRL 215 (323)
T ss_pred cCCC------ccccccCChhhcChhhhcC------CCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 2111 0112234558999999876 35678999999999999999999988543211 1
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCCh----HHHhhCCCCCcc
Q 004157 249 TASIPKSLLPDYQRLLSSMPSRRLNS----SKLIENSEYFQN 286 (771)
Q Consensus 249 ~~~IP~~l~~~i~~lL~~~P~~Rps~----~~lL~~~~fF~n 286 (771)
...++..+.+++++||..+|.+|+++ .++++| +||.+
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~-~~~~~ 256 (323)
T cd05575 216 KPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNH-VFFSS 256 (323)
T ss_pred CCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcC-CCcCC
Confidence 23577889999999999999999987 588887 56654
No 90
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.98 E-value=1.6e-31 Score=292.35 Aligned_cols=242 Identities=16% Similarity=0.181 Sum_probs=184.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e 89 (771)
+..+|++++.||.|+ | +||+|.+ +.++..|+||++.... .......+.+|+++|+.+ +||||+++++++.
T Consensus 5 ~~~~~~~~~~lG~G~fg--~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (338)
T cd05102 5 PRDRLRLGKVLGHGAFG--KVVEASAFGIDKKSSCNTVAVKMLKEGA-TASEHKALMSELKILIHIGNHLNVVNLLGACT 81 (338)
T ss_pred chhHceeeeEeccCCcc--eEEEEEEeccCCcccchhhheecccccc-chHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence 456799999999999 8 9999975 3456789999987532 223456788999999999 8999999999886
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCC---------------------------------------------
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------------------------------------------- 122 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~--------------------------------------------- 122 (771)
.. ...+|+||||+ ++|.++|......
T Consensus 82 ~~-------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (338)
T cd05102 82 KP-------NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTS 154 (338)
T ss_pred CC-------CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccC
Confidence 53 23689999999 6899988753210
Q ss_pred --------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCC
Q 004157 123 --------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANG 188 (771)
Q Consensus 123 --------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~ 188 (771)
.......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||+++........
T Consensus 155 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~--- 230 (338)
T cd05102 155 GSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLAS-RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY--- 230 (338)
T ss_pred cccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHH-CCEECCCCccceEEEcCCCcEEEeecccccccccCcch---
Confidence 011223345568899999999996 89999999999999999999999999999765432110
Q ss_pred CccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh--------------hccCCCC
Q 004157 189 PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL--------------RNTASIP 253 (771)
Q Consensus 189 ~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l--------------~~~~~IP 253 (771)
........+..|+|||++.+ ..++.++|+|||||++|||++ |..||..... .....++
T Consensus 231 -~~~~~~~~~~~y~aPE~~~~------~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (338)
T cd05102 231 -VRKGSARLPLKWMAPESIFD------KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENAT 303 (338)
T ss_pred -hcccCCCCCccccCcHHhhc------CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCC
Confidence 00111122347999999865 356789999999999999997 8877754211 1123456
Q ss_pred cchHHHHHHHhccCCCCCCChHHHhh
Q 004157 254 KSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 254 ~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
..+..++.+||+.+|..||++.++++
T Consensus 304 ~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 304 PEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHH
Confidence 77899999999999999999999875
No 91
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.98 E-value=2.2e-31 Score=284.88 Aligned_cols=242 Identities=18% Similarity=0.273 Sum_probs=191.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.||.|. | .||+|+++.+++.|+||.+......+.....+.+|+.++++++||||+++++++...+
T Consensus 6 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~------ 77 (293)
T cd07843 6 EYEKLNRIEEGTYG--VVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSN------ 77 (293)
T ss_pred hhhhhhhhcCCCCe--EEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC------
Confidence 599999999998 7 9999999999999999999865444444556778999999999999999999987643
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...+||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 78 ~~~~~lv~e~~~~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~-~~i~H~dl~p~nili~~~~~~~l~d~g~~~ 154 (293)
T cd07843 78 LDKIYMVMEYVEHDLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLHD-NWILHRDLKTSNLLLNNRGILKICDFGLAR 154 (293)
T ss_pred CCcEEEEehhcCcCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCCHHHEEECCCCcEEEeecCcee
Confidence 24899999999 578887766432 23345567779999999999996 899999999999999999999999999988
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----------- 246 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----------- 246 (771)
........ ......+..|+|||.+.+. ..++.++|+|||||++|+|++|.++|.....
T Consensus 155 ~~~~~~~~------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~ 223 (293)
T cd07843 155 EYGSPLKP------YTQLVVTLWYRAPELLLGA-----KEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLL 223 (293)
T ss_pred eccCCccc------cccccccccccCchhhcCC-----ccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 76542111 1112334579999988653 2346789999999999999999887742110
Q ss_pred -------------------------------hccCC--CCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 247 -------------------------------RNTAS--IPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 247 -------------------------------~~~~~--IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
..... +++.+.+++++||+.+|++||++.+++.|.||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 224 GTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred CCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 00011 46678899999999999999999999998543
No 92
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.98 E-value=9.6e-32 Score=292.44 Aligned_cols=235 Identities=17% Similarity=0.220 Sum_probs=184.8
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcCCcccE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
+.||.|+ | +||+|+++.+++.|+||++.+... .+.....+.+|.++++.+ +||||++++++++.. ..
T Consensus 1 ~~lG~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~--------~~ 70 (321)
T cd05591 1 KVLGKGSFG--KVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTK--------DR 70 (321)
T ss_pred CccccCCCe--EEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC--------Ce
Confidence 3578888 8 999999999999999999986422 223445677888888876 799999999999863 48
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+|+||||+ ++|...+...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~E~~~~~~L~~~l~~~~~~---~~~~~~~~~~qi~~aL~~LH~-~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 71 LFFVMEYVNGGDLMFQIQRSRKF---DEPRSRFYAAEVTLALMFLHR-HGVIYRDLKLDNILLDAEGHCKLADFGMCKEG 146 (321)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCCCEEEeecccceec
Confidence 99999999 5788888765432 233456679999999999996 89999999999999999999999999998754
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----c-------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----N------- 248 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----~------- 248 (771)
..... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...... .
T Consensus 147 ~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~ 214 (321)
T cd05591 147 ILNGV------TTTTFCGTPDYIAPEILQE------LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVL 214 (321)
T ss_pred ccCCc------cccccccCccccCHHHHcC------CCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC
Confidence 32211 1112234558999999875 35678999999999999999999998643211 1
Q ss_pred -cCCCCcchHHHHHHHhccCCCCCC-------ChHHHhhCCCCCcc
Q 004157 249 -TASIPKSLLPDYQRLLSSMPSRRL-------NSSKLIENSEYFQN 286 (771)
Q Consensus 249 -~~~IP~~l~~~i~~lL~~~P~~Rp-------s~~~lL~~~~fF~n 286 (771)
...++..+.+++.+||..+|.+|+ ++.++++| +||.+
T Consensus 215 ~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h-p~~~~ 259 (321)
T cd05591 215 YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH-PFFKE 259 (321)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC-CccCC
Confidence 123567899999999999999999 88999988 66654
No 93
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.98 E-value=2.5e-31 Score=284.99 Aligned_cols=242 Identities=21% Similarity=0.309 Sum_probs=190.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+|++.+.||.|+ | .||+|.++.+|+.|+||++...... ......+.+|+++++.++||||+++++++..+
T Consensus 1 ~y~~~~~lg~g~~~--~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---- 74 (298)
T cd07841 1 RYEKGKKLGEGTYA--VVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHK---- 74 (298)
T ss_pred Cceeeeeeeecccc--EEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecC----
Confidence 589999999997 7 9999999999999999999865433 33445677899999999999999999999863
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|.+++..... ......+..++.||++||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 75 ----~~~~lv~e~~~~~L~~~i~~~~~--~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dl~p~nill~~~~~~~l~dfg 147 (298)
T cd07841 75 ----SNINLVFEFMETDLEKVIKDKSI--VLTPADIKSYMLMTLRGLEYLHS-NWILHRDLKPNNLLIASDGVLKLADFG 147 (298)
T ss_pred ----CEEEEEEcccCCCHHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCChhhEEEcCCCCEEEccce
Confidence 3899999999 578888876541 12344456679999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------- 246 (771)
++......... .........|+|||.+.+. ..++.++|+|||||++|++++|.++|.....
T Consensus 148 ~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~ 216 (298)
T cd07841 148 LARSFGSPNRK------MTHQVVTRWYRAPELLFGA-----RHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIF 216 (298)
T ss_pred eeeeccCCCcc------ccccccceeeeCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHH
Confidence 99876542111 0111234479999987542 3456789999999999999999776642110
Q ss_pred h--------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 R--------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 ~--------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
. ....++..+.+++.+||..+|++||++.++++| +||.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~-~~~~~ 287 (298)
T cd07841 217 EALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH-PYFSN 287 (298)
T ss_pred HHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC-ccccC
Confidence 0 012345678889999999999999999999998 55554
No 94
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.98 E-value=1.5e-31 Score=291.40 Aligned_cols=240 Identities=18% Similarity=0.229 Sum_probs=188.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCC-CeeEEeeeEEecccCcC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHP-NILAFLHSTEVENIDAT 96 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHP-nIlkv~d~~e~e~~d~~ 96 (771)
.|++.+.||.|+ | .||+|+++.+++.|+||++.+... .+...+.+..|.++++.++|+ +|+++++++...
T Consensus 1 ~y~~~~~lg~G~~g--~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~----- 73 (324)
T cd05587 1 DFNFLMVLGKGSFG--KVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM----- 73 (324)
T ss_pred CceEEEEEeeccCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcC-----
Confidence 489999999998 8 999999999999999999986422 223456677899999999875 588888888763
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 74 ---~~~~lv~E~~~~g~L~~~~~~~~~~---~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 74 ---DRLYFVMEYVNGGDLMYHIQQVGKF---KEPHAVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred ---CEEEEEEcCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEEcCCCCEEEeecC
Confidence 4899999999 5798888765432 233455669999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
++........ ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 147 ~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~ 214 (324)
T cd05587 147 MCKENIFGGK------TTRTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIM 214 (324)
T ss_pred cceecCCCCC------ceeeecCCccccChhhhcC------CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9875322110 0112234568999999876 35678899999999999999999988543211
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCCh-----HHHhhCCCCCcc
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENSEYFQN 286 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~-----~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+|++. .++++| +||..
T Consensus 215 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h-p~~~~ 262 (324)
T cd05587 215 EHNVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH-AFFRR 262 (324)
T ss_pred cCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC-CCcCC
Confidence 113466778899999999999999986 677777 67754
No 95
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.98 E-value=2.2e-31 Score=283.27 Aligned_cols=241 Identities=17% Similarity=0.239 Sum_probs=188.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.||.|. | .||+|+++.+|+.|+||++..+.........+.+|++.+++++||||++++++++..
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------- 71 (284)
T cd07860 1 NFQKVEKIGEGTYG--VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE------- 71 (284)
T ss_pred CceeeeeecCCCce--EEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccC-------
Confidence 488999999987 7 999999999999999999876544444456788999999999999999999998753
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..+|+||||+ ++|..++...... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 72 -~~~~~v~e~~~~~l~~~~~~~~~~-~l~~~~~~~~~~~i~~~l~~lh~-~~i~H~~l~p~nill~~~~~~~l~dfg~~~ 148 (284)
T cd07860 72 -NKLYLVFEFLHQDLKKFMDASPLS-GIPLPLIKSYLFQLLQGLAFCHS-HRVLHRDLKPQNLLINTEGAIKLADFGLAR 148 (284)
T ss_pred -CcEEEEeeccccCHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEEeeccchh
Confidence 4889999999 5788777654322 22344566679999999999996 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---------- 247 (771)
........ .........|+|||+..+. ..++.++|+|||||++|+|++|..+|......
T Consensus 149 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~ 217 (284)
T cd07860 149 AFGVPVRT------YTHEVVTLWYRAPEILLGC-----KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 217 (284)
T ss_pred hcccCccc------cccccccccccCCeEEecC-----CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHh
Confidence 65432110 0111234579999987653 23567899999999999999999877432100
Q ss_pred -------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 248 -------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 248 -------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
....++..+.+++.+||+.+|.+||++.++++|+||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 218 GTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred CCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 012356677889999999999999999999999543
No 96
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.98 E-value=4.5e-32 Score=257.14 Aligned_cols=241 Identities=20% Similarity=0.332 Sum_probs=198.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|+--|+||+|+ | +||+|+++++++-|++|........+.....+.+|+-+|+.|+|.||++++|+...+
T Consensus 3 ~ydkmekigegtyg--tvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsd------- 73 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYG--TVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD------- 73 (292)
T ss_pred chHHHHhhcCCcce--eeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccC-------
Confidence 477778999999 9 999999999999999999998777777777889999999999999999999999874
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
+.+-+|+|+| ..|..++...+ +....+.+.-.+.|+++||.|+|+ .++.|||+||.|.+|+.+|+.||.|||+++
T Consensus 74 -kkltlvfe~cdqdlkkyfdsln--g~~d~~~~rsfmlqllrgl~fchs-hnvlhrdlkpqnllin~ngelkladfglar 149 (292)
T KOG0662|consen 74 -KKLTLVFEFCDQDLKKYFDSLN--GDLDPEIVRSFMLQLLRGLGFCHS-HNVLHRDLKPQNLLINRNGELKLADFGLAR 149 (292)
T ss_pred -ceeEEeHHHhhHHHHHHHHhcC--CcCCHHHHHHHHHHHHhhhhhhhh-hhhhhccCCcceEEeccCCcEEecccchhh
Confidence 3889999999 78888887653 333445566669999999999997 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCcccc-ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh----hhc---
Q 004157 178 EFDGNNEAANGPMLQY-AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----LRN--- 248 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~-~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~----l~~--- 248 (771)
.+.- |+..| ..+++..|+||.++.+. +-|+..+|+||-||++.|+-+ |.++|...+ ++.
T Consensus 150 afgi-------pvrcysaevvtlwyrppdvlfga-----kly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~ 217 (292)
T KOG0662|consen 150 AFGI-------PVRCYSAEVVTLWYRPPDVLFGA-----KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR 217 (292)
T ss_pred hcCC-------ceEeeeceeeeeeccCcceeeee-----ehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHH
Confidence 7754 44444 34566799999999886 678889999999999999998 456665322 111
Q ss_pred ------------c----------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 249 ------------T----------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 ------------~----------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
+ .++...-+++++++|..+|.+|++++..++| +||.+
T Consensus 218 ~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh-pyf~d 288 (292)
T KOG0662|consen 218 LLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH-PYFSD 288 (292)
T ss_pred HhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC-ccccc
Confidence 1 1112235677899999999999999999998 77754
No 97
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.98 E-value=3.3e-31 Score=279.03 Aligned_cols=242 Identities=17% Similarity=0.257 Sum_probs=189.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-------hHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-------GHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-------~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
+|.++..||.|. | .||.|.+..+++.|++|.+....... ...+.+++|+.++++++||||+++++++..+
T Consensus 1 ~~~~~~~ig~g~~~--~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 78 (267)
T cd06628 1 KWIKGALIGSGSFG--SVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDA 78 (267)
T ss_pred CccccceeecCCCe--EEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeC
Confidence 588899999986 6 99999999999999999997643221 2346788999999999999999999998864
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~K 169 (771)
.+.|+||||+ ++|..++...... ....+..++.|++.||.|||+ .+++||||+|+||+++.++.+|
T Consensus 79 --------~~~~lv~e~~~~~~L~~~l~~~~~l---~~~~~~~~~~~l~~~l~~lH~-~~ivH~di~p~nil~~~~~~~~ 146 (267)
T cd06628 79 --------DHLNIFLEYVPGGSVAALLNNYGAF---EETLVRNFVRQILKGLNYLHN-RGIIHRDIKGANILVDNKGGIK 146 (267)
T ss_pred --------CccEEEEEecCCCCHHHHHHhccCc---cHHHHHHHHHHHHHHHHHHHh-cCcccccCCHHHEEEcCCCCEE
Confidence 3789999999 4788888765432 233455669999999999996 8999999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE---- 245 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~---- 245 (771)
|+|||++....................+...|+|||.+.+ ..++.++|+|+|||++|+|++|..||....
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 220 (267)
T cd06628 147 ISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQ------TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA 220 (267)
T ss_pred ecccCCCcccccccccCCccccccccCCCcCccChhHhcc------CCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH
Confidence 9999999876532111100000111223457999999865 345678999999999999999998875321
Q ss_pred hh---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 246 LR---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 246 l~---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
.. ....++..+.+++++||+.+|.+||++.++++|.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 265 (267)
T cd06628 221 IFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHP 265 (267)
T ss_pred HHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCC
Confidence 10 1134677789999999999999999999999984
No 98
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.98 E-value=6.5e-31 Score=274.95 Aligned_cols=240 Identities=21% Similarity=0.253 Sum_probs=191.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.+|.|+ | .||.++++.+++.|+||++..........+.+.+|++.+++++||||+++++.+...
T Consensus 1 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (257)
T cd08223 1 AYCFVRVVGKGSYG--EVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGE------- 71 (257)
T ss_pred CceEEEEecCCCCe--EEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCC-------
Confidence 499999999998 8 999999999999999999986554445566789999999999999999999987643
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...+|+|+||+ ++|.+++...... ......+..++.|++.||.|||+ .+++||||+|+||+++.++.++|+|||++
T Consensus 72 ~~~~~lv~e~~~~~~l~~~l~~~~~~-~l~~~~~~~~~~~l~~~l~~lH~-~~i~H~di~p~nil~~~~~~~~l~df~~~ 149 (257)
T cd08223 72 DGLLYIVMGFCEGGDLYHKLKEQKGK-LLPENQVVEWFVQIAMALQYLHE-KHILHRDLKTQNVFLTRTNIIKVGDLGIA 149 (257)
T ss_pred CCEEEEEecccCCCcHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCchhEEEecCCcEEEecccce
Confidence 23689999999 4788888764321 12344566779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc--------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~-------- 248 (771)
......... .........|+|||+..+ ..++.++|+|||||++|++++|..+|...+...
T Consensus 150 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~ 217 (257)
T cd08223 150 RVLENQCDM------ASTLIGTPYYMSPELFSN------KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEG 217 (257)
T ss_pred EEecccCCc------cccccCCcCccChhHhcC------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc
Confidence 766432110 111223458999999875 356678999999999999999998875432111
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 249 -----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 249 -----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
...++..+.+++.+|++.+|..||++.++++|++
T Consensus 218 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~ 256 (257)
T cd08223 218 KLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPY 256 (257)
T ss_pred CCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence 1235677899999999999999999999999843
No 99
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.97 E-value=3.7e-31 Score=282.68 Aligned_cols=239 Identities=17% Similarity=0.261 Sum_probs=186.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|++.+.+|.|+ | +||+|+++.+++.|+||.+....... ....+.+|+++++.++||||++++++++.+
T Consensus 5 ~~y~~~~~lg~g~~~--~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------ 75 (291)
T cd07844 5 ETYKKLDKLGEGSYA--TVYKGRSKLTGQLVALKEIRLEHEEG-APFTAIREASLLKDLKHANIVTLHDIIHTK------ 75 (291)
T ss_pred cceeEEEEEeecCCe--EEEEEEEcCCCcEEEEEEEecccccC-CchhHHHHHHHHhhCCCcceeeEEEEEecC------
Confidence 5699999999998 8 99999999999999999997643222 223466899999999999999999998863
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
.+.|+||||+ ++|.+++..... ......+..++.||++||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 76 --~~~~lv~e~~~~~L~~~~~~~~~--~~~~~~~~~~~~ql~~al~~lH~-~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 150 (291)
T cd07844 76 --KTLTLVFEYLDTDLKQYMDDCGG--GLSMHNVRLFLFQLLRGLAYCHQ-RRVLHRDLKPQNLLISERGELKLADFGLA 150 (291)
T ss_pred --CeEEEEEecCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeecccCCHHHEEEcCCCCEEECccccc
Confidence 4899999999 578888876432 22344567779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----hh----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----LR---- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-----l~---- 247 (771)
......... ......+..|+|||+..+. ..++.++|+|||||++|+|++|.++|.... +.
T Consensus 151 ~~~~~~~~~------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~ 219 (291)
T cd07844 151 RAKSVPSKT------YSNEVVTLWYRPPDVLLGS-----TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFR 219 (291)
T ss_pred cccCCCCcc------ccccccccccCCcHHhhcC-----cccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHH
Confidence 754321110 0111234579999987653 245678999999999999999998874321 00
Q ss_pred ----------------------------------ccCCCC--cchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 ----------------------------------NTASIP--KSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ----------------------------------~~~~IP--~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....+. ..+.+++.+||+.+|.+||++.++++|++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~ 290 (291)
T cd07844 220 VLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPY 290 (291)
T ss_pred hcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCC
Confidence 001233 56678999999999999999999999854
No 100
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.97 E-value=3.1e-31 Score=282.53 Aligned_cols=236 Identities=13% Similarity=0.173 Sum_probs=183.8
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
||.|+ | +||.+.++.+|+.|+||++.+..... ...+.+.+|+++++.++||||++++++++.+ ..+|+
T Consensus 1 lg~G~~g--~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~--------~~~~l 70 (280)
T cd05608 1 LGKGGFG--EVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTK--------TDLCL 70 (280)
T ss_pred CCCCCce--eEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCC--------CeEEE
Confidence 46777 7 99999999999999999997543222 2345677899999999999999999998863 47999
Q ss_pred EecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 105 VTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 105 VtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
||||+ ++|..++..... ........+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++.....
T Consensus 71 v~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 149 (280)
T cd05608 71 VMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ-RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKD 149 (280)
T ss_pred EEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEeeCccceecCC
Confidence 99999 578877754321 1223344456669999999999996 8999999999999999999999999999876543
Q ss_pred CCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-------h-h------
Q 004157 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------L-R------ 247 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-------l-~------ 247 (771)
.... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||.... . .
T Consensus 150 ~~~~------~~~~~g~~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 217 (280)
T cd05608 150 GQSK------TKGYAGTPGFMAPELLQG------EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDS 217 (280)
T ss_pred CCcc------ccccCCCcCccCHHHhcC------CCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccC
Confidence 2110 112234458999999876 356679999999999999999998875321 0 0
Q ss_pred --ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 248 --NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 248 --~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+|+ +++++++| +||+.
T Consensus 218 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h-~~~~~ 262 (280)
T cd05608 218 VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH-PLFRD 262 (280)
T ss_pred CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC-hhhhc
Confidence 0134677899999999999999999 77899988 56644
No 101
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.97 E-value=1.6e-31 Score=291.92 Aligned_cols=234 Identities=17% Similarity=0.218 Sum_probs=183.5
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
.||.|+ | +||.|+++.+++.|+||++.+.... ......+++|..+++++ +||||++++++++.+ ..+
T Consensus 2 ~lG~G~~g--~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~--------~~~ 71 (329)
T cd05588 2 VIGRGSYA--KVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTE--------SRL 71 (329)
T ss_pred eEeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcC--------CEE
Confidence 577887 8 9999999999999999999864322 23456678899999998 699999999999864 489
Q ss_pred EEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
||||||| ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~g~L~~~~~~~~~---l~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~ 147 (329)
T cd05588 72 FFVIEFVSGGDLMFHMQRQRK---LPEEHARFYSAEISLALNFLHE-RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGI 147 (329)
T ss_pred EEEEeCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECCCCCEEECcCccccccc
Confidence 9999999 478888866432 2344456679999999999996 899999999999999999999999999987532
Q ss_pred CCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh---------------
Q 004157 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--------------- 245 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~--------------- 245 (771)
.... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||....
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~ 215 (329)
T cd05588 148 RPGD------TTSTFCGTPNYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQ 215 (329)
T ss_pred cCCC------ccccccCCccccCHHHHcC------CCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHH
Confidence 2111 0112234558999999876 356789999999999999999999884210
Q ss_pred --hhc----cCCCCcchHHHHHHHhccCCCCCCC------hHHHhhCCCCCcc
Q 004157 246 --LRN----TASIPKSLLPDYQRLLSSMPSRRLN------SSKLIENSEYFQN 286 (771)
Q Consensus 246 --l~~----~~~IP~~l~~~i~~lL~~~P~~Rps------~~~lL~~~~fF~n 286 (771)
... ...++..+.+++.+||+.+|.+|++ +.++++| +||.+
T Consensus 216 ~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h-p~~~~ 267 (329)
T cd05588 216 VILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH-PFFRN 267 (329)
T ss_pred HHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC-CCCCC
Confidence 011 1235566788999999999999997 6899988 56654
No 102
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.97 E-value=4.3e-32 Score=294.63 Aligned_cols=235 Identities=15% Similarity=0.243 Sum_probs=183.9
Q ss_pred CCCCCCC-CceEEEEeEE---CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCccc
Q 004157 25 DPYPSAW-GSWSHFQGTS---KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~---k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
+.||.|+ | +||.+.+ +.+|+.|+||++.+..........+.+|+++|++++||||+++++.++.+ .
T Consensus 2 ~~lg~G~~g--~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--------~ 71 (318)
T cd05582 2 KVLGQGSFG--KVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTE--------G 71 (318)
T ss_pred ceeeeCCCE--EEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcC--------C
Confidence 4678887 7 7887765 46789999999986433333445677899999999999999999999864 3
Q ss_pred EEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 101 TIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 101 ~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
.+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++..
T Consensus 72 ~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 147 (318)
T cd05582 72 KLYLILDFLRGGDLFTRLSKEVM---FTEEDVKFYLAELALALDHLHS-LGIIYRDLKPENILLDEEGHIKLTDFGLSKE 147 (318)
T ss_pred EEEEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHeEECCCCcEEEeeccCCcc
Confidence 899999999 578888866432 2344566679999999999996 8999999999999999999999999999876
Q ss_pred cCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------c--
Q 004157 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------N-- 248 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------~-- 248 (771)
...... ......+...|+|||++.+ ..++.++|+|||||++|+|++|..||...... .
T Consensus 148 ~~~~~~------~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~ 215 (318)
T cd05582 148 SIDHEK------KAYSFCGTVEYMAPEVVNR------RGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL 215 (318)
T ss_pred cCCCCC------ceecccCChhhcCHHHHcC------CCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC
Confidence 543211 1122234458999999875 35667999999999999999999888643211 1
Q ss_pred --cCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcc
Q 004157 249 --TASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQN 286 (771)
Q Consensus 249 --~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n 286 (771)
...++..+.+++++||+.+|.+||+ +.++++| .||.+
T Consensus 216 ~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~-~~~~~ 259 (318)
T cd05582 216 GMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRH-PFFST 259 (318)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCC-CCcCC
Confidence 1235677899999999999999999 6678887 66665
No 103
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=2.7e-31 Score=286.74 Aligned_cols=246 Identities=17% Similarity=0.257 Sum_probs=191.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|. | .||+|+++.+|+.|+||++..+...+.......+|+.++++++||||+++++++..+.
T Consensus 5 ~~~~y~~~~~ig~g~~~--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 79 (309)
T cd07845 5 SVTEFEKLNRIGEGTYG--IVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKH--- 79 (309)
T ss_pred cccceeEeeeeeecCCE--EEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCC---
Confidence 345799999999997 7 9999999999999999999865443333345667999999999999999999987643
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...+|+||||+ ++|.+++.... .......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 80 ---~~~~~lv~e~~~~~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 80 ---LDSIFLVMEYCEQDLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHE-NFIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred ---CCeEEEEEecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCCEEECccc
Confidence 24789999999 57887776543 122344566679999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
++......... .........|+|||++.+. ..++.++|+|||||++|+|++|.++|......
T Consensus 154 ~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~ 222 (309)
T cd07845 154 LARTYGLPAKP------MTPKVVTLWYRAPELLLGC-----TTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLII 222 (309)
T ss_pred eeeecCCccCC------CCcccccccccChhhhcCC-----CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99876542110 0111224479999997653 34667899999999999999999887422100
Q ss_pred -----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 -----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 -----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....+++.+.+++++||..||++||++.+++.| +||.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h-~~f~ 294 (309)
T cd07845 223 QLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES-SYFK 294 (309)
T ss_pred HhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC-hhhc
Confidence 001245667889999999999999999999998 5554
No 104
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.97 E-value=4.2e-31 Score=280.87 Aligned_cols=238 Identities=20% Similarity=0.273 Sum_probs=187.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|. | .||+|+++.+|+.|+||++..........+.+.+|++++++++||||+++++.++..
T Consensus 2 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------- 72 (286)
T cd07847 2 KYEKLSKIGEGSYG--VVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRK------- 72 (286)
T ss_pred ceeeeeeecccCCe--EEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeC-------
Confidence 599999999998 8 999999999999999999976543333445678999999999999999999999863
Q ss_pred ccEEEEEecCC-cc-hHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV-MP-LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v-~~-L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ +. |..++.... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 73 -~~~~~v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH~-~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (286)
T cd07847 73 -RKLHLVFEYCDHTVLNELEKNPR---GVPEHLIKKIIWQTLQAVNFCHK-HNCIHRDVKPENILITKQGQIKLCDFGFA 147 (286)
T ss_pred -CEEEEEEeccCccHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHH-CCceecCCChhhEEEcCCCcEEECccccc
Confidence 4899999999 33 444443322 12344566779999999999996 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h-----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~----- 247 (771)
......... .........|++||++.+. ..++.++|+|||||++|+|++|.+||..... .
T Consensus 148 ~~~~~~~~~------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~ 216 (286)
T cd07847 148 RILTGPGDD------YTDYVATRWYRAPELLVGD-----TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKT 216 (286)
T ss_pred eecCCCccc------ccCcccccccCCHHHHhCC-----CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 876542210 1112234579999997653 3456789999999999999999988743210 0
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++.+||..+|++||++.+++.|++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~ 285 (286)
T cd07847 217 LGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPY 285 (286)
T ss_pred hCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCC
Confidence 01245677889999999999999999999999843
No 105
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.97 E-value=7.4e-31 Score=275.61 Aligned_cols=244 Identities=16% Similarity=0.218 Sum_probs=193.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++++.+|.|+ | +||+|....++..|+||++....... ....+.+|++.++.++||||+++++.++..
T Consensus 2 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (267)
T cd06610 2 DYELIEVIGVGATA--VVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVVG------- 71 (267)
T ss_pred cceeeeeecCCCCe--EEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEeeC-------
Confidence 599999999997 7 99999999999999999997654433 567789999999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+|||++ ++|.+++.............+..++.||+.||.|||+ .+++||||+|+||++++++.+||+|||++
T Consensus 72 -~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~-~~i~h~~l~p~ni~~~~~~~~~l~df~~~ 149 (267)
T cd06610 72 -DELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS-NGQIHRDIKAGNILLGEDGSVKIADFGVS 149 (267)
T ss_pred -CEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHhEEEcCCCCEEEcccchH
Confidence 4899999999 5798888765332223444566679999999999996 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------- 247 (771)
........... ...........|++||++... ..++.++|+|||||++|+|++|..|+......
T Consensus 150 ~~~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~-----~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~ 222 (267)
T cd06610 150 ASLADGGDRTR--KVRKTFVGTPCWMAPEVMEQV-----HGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN 222 (267)
T ss_pred HHhccCccccc--cccccccCChhhcChHHHccc-----cCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC
Confidence 77654321110 011112334579999998653 25678899999999999999999887532210
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++.+||..+|.+||++.++++|++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~ 266 (267)
T cd06610 223 DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKF 266 (267)
T ss_pred CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCC
Confidence 01245677899999999999999999999999843
No 106
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.97 E-value=2e-31 Score=291.22 Aligned_cols=234 Identities=15% Similarity=0.219 Sum_probs=182.3
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
.||.|+ | +||+|+++.+++.|+||++.+.... ......+.+|+.++.++ +||||++++++++.. ..+
T Consensus 2 ~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~--------~~~ 71 (329)
T cd05618 2 VIGRGSYA--KVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE--------SRL 71 (329)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeC--------CEE
Confidence 578887 8 9999999999999999999865322 23456678899888876 799999999999874 489
Q ss_pred EEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~E~~~~~~L~~~~~~~~~---l~~~~~~~i~~qi~~~l~~lH~-~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~ 147 (329)
T cd05618 72 FFVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLHE-RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 147 (329)
T ss_pred EEEEeCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEECCCCCEEEeeCCcccccc
Confidence 9999999 578887766432 2344466679999999999996 899999999999999999999999999987543
Q ss_pred CCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh------------h---
Q 004157 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE------------E--- 245 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~------------~--- 245 (771)
..... .....++..|+|||++.+ ..++.++|+|||||++|+|++|..||... .
T Consensus 148 ~~~~~------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~ 215 (329)
T cd05618 148 RPGDT------TSTFCGTPNYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 215 (329)
T ss_pred CCCCc------cccccCCccccCHHHHcC------CCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHH
Confidence 21110 112234558999999876 35677999999999999999999887410 0
Q ss_pred --hhcc----CCCCcchHHHHHHHhccCCCCCCCh------HHHhhCCCCCcc
Q 004157 246 --LRNT----ASIPKSLLPDYQRLLSSMPSRRLNS------SKLIENSEYFQN 286 (771)
Q Consensus 246 --l~~~----~~IP~~l~~~i~~lL~~~P~~Rps~------~~lL~~~~fF~n 286 (771)
.... ..++..+.+++++||+.+|.+|+++ .++++| +||++
T Consensus 216 ~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h-p~f~~ 267 (329)
T cd05618 216 VILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH-PFFRN 267 (329)
T ss_pred HHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC-CCCCC
Confidence 0111 2345567789999999999999984 788888 66655
No 107
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.97 E-value=2.2e-31 Score=295.82 Aligned_cols=247 Identities=14% Similarity=0.164 Sum_probs=191.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
....|++.+.||.|+ | +||++.++.+++.|++|++.+... .......+.+|+.+++.++||||+++++.++..
T Consensus 41 ~~~~y~i~~~lG~G~fg--~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~--- 115 (371)
T cd05622 41 KAEDYEVVKVIGRGAFG--EVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD--- 115 (371)
T ss_pred chhhcEEEEEEeecCCe--EEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC---
Confidence 446799999999998 8 999999999999999999975322 223345678899999999999999999999863
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
.++|+||||| ++|.++++.... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 116 -----~~~~lv~Ey~~gg~L~~~~~~~~~----~~~~~~~~~~qi~~aL~~LH~-~~ivHrDLkp~NIll~~~~~ikL~D 185 (371)
T cd05622 116 -----RYLYMVMEYMPGGDLVNLMSNYDV----PEKWARFYTAEVVLALDAIHS-MGFIHRDVKPDNMLLDKSGHLKLAD 185 (371)
T ss_pred -----CEEEEEEcCCCCCcHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCEEeCCCCHHHEEECCCCCEEEEe
Confidence 4899999999 579998876543 234456678999999999996 9999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----hc
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----RN 248 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~~ 248 (771)
||++........ .......++..|+|||++.+.-. ...++.++|+|||||++|||++|..||..... ..
T Consensus 186 fG~a~~~~~~~~-----~~~~~~~gt~~y~aPE~l~~~~~--~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~ 258 (371)
T cd05622 186 FGTCMKMNKEGM-----VRCDTAVGTPDYISPEVLKSQGG--DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSK 258 (371)
T ss_pred CCceeEcCcCCc-----ccccCcccCccccCHHHHhccCC--CccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999987643211 11112344568999999865210 02366799999999999999999999864321 00
Q ss_pred ------------cCCCCcchHHHHHHHhccCCCC--CCChHHHhhCCCCCcc
Q 004157 249 ------------TASIPKSLLPDYQRLLSSMPSR--RLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 ------------~~~IP~~l~~~i~~lL~~~P~~--Rps~~~lL~~~~fF~n 286 (771)
...++..+.+++.+||...+.+ |+++.++++| .||.+
T Consensus 259 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h-~~~~~ 309 (371)
T cd05622 259 IMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH-LFFKN 309 (371)
T ss_pred HHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC-cccCC
Confidence 1246677889999999844433 7899999998 45554
No 108
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.97 E-value=2e-31 Score=289.66 Aligned_cols=235 Identities=16% Similarity=0.212 Sum_probs=185.9
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcCCcccE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
+.||.|+ | +||+|.++.+++.|+||++.+... .......+.+|.++++.+ +||||++++++++.. ..
T Consensus 1 ~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~--------~~ 70 (318)
T cd05570 1 KVLGKGSFG--KVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTK--------DR 70 (318)
T ss_pred CeeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC--------CE
Confidence 3578887 8 999999999999999999986421 223455677888999888 699999999999863 48
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 146 (318)
T cd05570 71 LFFVMEYVNGGDLMFHIQRSGR---FDEPRARFYAAEIVLGLQFLHE-RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEG 146 (318)
T ss_pred EEEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeEccCCCHHHeEECCCCcEEecccCCCeec
Confidence 99999999 578888876532 2344466679999999999996 89999999999999999999999999998753
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------ 247 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------ 247 (771)
..... ......+...|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 147 ~~~~~------~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~ 214 (318)
T cd05570 147 ILGGV------TTSTFCGTPDYIAPEILSY------QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVR 214 (318)
T ss_pred CcCCC------cccceecCccccCHHHhcC------CCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC
Confidence 22111 0112234558999999876 35678999999999999999999988543211
Q ss_pred ccCCCCcchHHHHHHHhccCCCCCCCh-----HHHhhCCCCCcc
Q 004157 248 NTASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENSEYFQN 286 (771)
Q Consensus 248 ~~~~IP~~l~~~i~~lL~~~P~~Rps~-----~~lL~~~~fF~n 286 (771)
....++..+.+++++||..+|.+||++ .++++| +||.+
T Consensus 215 ~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~-~~~~~ 257 (318)
T cd05570 215 YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH-PFFRE 257 (318)
T ss_pred CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC-CCcCC
Confidence 113467788999999999999999999 999988 66655
No 109
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=4.1e-32 Score=268.82 Aligned_cols=238 Identities=18% Similarity=0.249 Sum_probs=196.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..|++|+.+|.|- | .||.|+.+.++--|++|++.++.-.. ....++++|+++-..|+||||++.|.+|.++
T Consensus 22 ~dfeigr~LgkgkFG--~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~----- 94 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFG--NVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS----- 94 (281)
T ss_pred hhccccccccCCccc--cEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc-----
Confidence 4799999999988 9 99999999999999999998764322 3456789999999999999999999999874
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+++||. +.|...|........ .+..-+.+++|++.||.|+|. ++++||||||+|++++.+|..||+|||
T Consensus 95 ---~riyLilEya~~gel~k~L~~~~~~~f-~e~~~a~Yi~q~A~Al~y~h~-k~VIhRdiKpenlLlg~~~~lkiAdfG 169 (281)
T KOG0580|consen 95 ---KRIYLILEYAPRGELYKDLQEGRMKRF-DEQRAATYIKQLANALLYCHL-KRVIHRDIKPENLLLGSAGELKIADFG 169 (281)
T ss_pred ---ceeEEEEEecCCchHHHHHHhcccccc-cccchhHHHHHHHHHHHHhcc-CCcccCCCCHHHhccCCCCCeeccCCC
Confidence 4899999999 579999985432111 112233449999999999996 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
.+...... .+...+++..|.|||...+ ...+..+|+|++|+++||++.|.+||.+....
T Consensus 170 wsV~~p~~--------kR~tlcgt~dyl~pEmv~~------~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~ 235 (281)
T KOG0580|consen 170 WSVHAPSN--------KRKTLCGTLDYLPPEMVEG------RGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIR 235 (281)
T ss_pred ceeecCCC--------CceeeecccccCCHhhcCC------CCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHH
Confidence 97654321 1223345569999999987 47788999999999999999999999765422
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....|+....++|.+||..+|..|....+++.|+|
T Consensus 236 k~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpw 275 (281)
T KOG0580|consen 236 KVDLKFPSTISGGAADLISRLLVKNPIERLALTEVMDHPW 275 (281)
T ss_pred HccccCCcccChhHHHHHHHHhccCccccccHHHHhhhHH
Confidence 22568888999999999999999999999999954
No 110
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.97 E-value=7.8e-31 Score=283.48 Aligned_cols=238 Identities=15% Similarity=0.170 Sum_probs=190.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.||.|+ | .||++.++.+|..|++|.+.... .......+.+|++++++++||||+++++.+..+
T Consensus 2 ~~~~~~~lg~G~~g--~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 71 (308)
T cd06615 2 DFEKLGELGAGNGG--VVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSD------- 71 (308)
T ss_pred CceEEeeccCCCCe--EEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC-------
Confidence 599999999998 8 99999999999999999987542 233456688899999999999999999999864
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.++++.... .....+..++.||+.||.|||+.++++||||+|+||+++.+|.+||+|||++
T Consensus 72 -~~~~lv~ey~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (308)
T cd06615 72 -GEISICMEHMDGGSLDQVLKKAGR---IPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 147 (308)
T ss_pred -CEEEEEeeccCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCc
Confidence 4899999999 479999876532 2344566779999999999996569999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc-------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT------- 249 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~------- 249 (771)
....... .........|+|||++.+ ..++.++|+|||||++|+|++|..|+...+....
T Consensus 148 ~~~~~~~--------~~~~~~~~~~~aPE~~~~------~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 213 (308)
T cd06615 148 GQLIDSM--------ANSFVGTRSYMSPERLQG------THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRP 213 (308)
T ss_pred ccccccc--------cccCCCCcCccChhHhcC------CCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCc
Confidence 6553311 111234458999999765 3466789999999999999999987642111000
Q ss_pred -------------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 250 -------------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 250 -------------------------------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
..++..+.+++.+||..+|++||++.++++| +||.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~-~~~~~ 292 (308)
T cd06615 214 VSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH-PFIKR 292 (308)
T ss_pred cccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC-hhhhh
Confidence 0134568899999999999999999999998 55543
No 111
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.97 E-value=1.4e-31 Score=296.01 Aligned_cols=246 Identities=13% Similarity=0.173 Sum_probs=190.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||.+.++.+++.|+||++..... .......+++|+++++.++||||+++++.++..
T Consensus 2 ~f~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~------ 73 (360)
T cd05627 2 DFESLKVIGRGAFG--EVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDK------ 73 (360)
T ss_pred CceEEEEEeeCCCE--EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC------
Confidence 589999999998 8 999999999999999999975321 223456788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++||||||| ++|.+++.+.... ....++.++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~E~~~gg~L~~~l~~~~~l---~~~~~~~~~~qi~~~L~~lH~-~givHrDLkp~NIli~~~~~vkL~DfG~ 147 (360)
T cd05627 74 --RNLYLIMEFLPGGDMMTLLMKKDTL---SEEATQFYIAETVLAIDAIHQ-LGFIHRDIKPDNLLLDAKGHVKLSDFGL 147 (360)
T ss_pred --CEEEEEEeCCCCccHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEccCCCHHHEEECCCCCEEEeeccC
Confidence 4899999999 5799988765432 234456669999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCCCC-----------------------------CCccccccccCCCCCChhccccccccccCCCCCcchHHH
Q 004157 176 LSEFDGNNEAAN-----------------------------GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWG 226 (771)
Q Consensus 176 a~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~S 226 (771)
+........... .....+...++..|+|||++.+ ..++.++|+||
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~------~~~~~~~DiwS 221 (360)
T cd05627 148 CTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQ------TGYNKLCDWWS 221 (360)
T ss_pred CcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcC------CCCCCcceecc
Confidence 875532110000 0000112244558999999876 46778999999
Q ss_pred HHHHHHHHhhCCCCCChhhhh----------cc------CCCCcchHHHHHHHhccCCCCCCC---hHHHhhCCCCCcch
Q 004157 227 LGCLIYELFSGMRLSKTEELR----------NT------ASIPKSLLPDYQRLLSSMPSRRLN---SSKLIENSEYFQNK 287 (771)
Q Consensus 227 LG~li~el~~g~~p~~~~~l~----------~~------~~IP~~l~~~i~~lL~~~P~~Rps---~~~lL~~~~fF~n~ 287 (771)
|||++|||++|.+||...... .. ..++..+.+++.+|+. +|..|++ +.++++| +||.+.
T Consensus 222 lGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h-p~f~~~ 299 (360)
T cd05627 222 LGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH-PFFEGV 299 (360)
T ss_pred ccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC-CCCCCC
Confidence 999999999999998543211 00 1245667888888874 9999984 7899988 677764
No 112
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-31 Score=306.73 Aligned_cols=252 Identities=14% Similarity=0.189 Sum_probs=192.9
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEee-eEEecccC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLH-STEVENID 94 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d-~~e~e~~d 94 (771)
..+++|.+.|.+|+ + .||.|.....|..||+|.+-.. ++..+..+++||.+||.|+ |||||.|+| .......+
T Consensus 36 ~~~v~V~~vLAEGGFa--~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~ 111 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFA--QVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSN 111 (738)
T ss_pred CEEEEEEEEEccCCcE--EEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCC
Confidence 34677777888886 6 9999999988899999998764 5567889999999999999 999999999 43333222
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC--ceecCCCCCCEEEcCCCcEEE
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dIkp~NI~v~~~G~~KL 170 (771)
++ .-.++|.|||| +.|-+++..+.-.. ..+..|..|++++++|+.+||. ++ |||||||-+|||++.+|.|||
T Consensus 112 ~~--~~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KL 187 (738)
T KOG1989|consen 112 NG--VWEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKL 187 (738)
T ss_pred Cc--eeEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEe
Confidence 11 35789999999 47999998654332 3344577889999999999996 77 999999999999999999999
Q ss_pred EccCcccccCCCCCCCCC-Ccccc--ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-hh
Q 004157 171 HAFDVLSEFDGNNEAANG-PMLQY--AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-EL 246 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~-~~~~~--~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-~l 246 (771)
||||-++...-......+ .+... ....+..|++||++.-- . ....+.++|||+||||+|.|+....||+.. .+
T Consensus 188 CDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDly-s--g~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l 264 (738)
T KOG1989|consen 188 CDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLY-S--GLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL 264 (738)
T ss_pred CcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhh-c--CCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce
Confidence 999998754332111110 01111 11234599999998531 1 145678999999999999999999999765 43
Q ss_pred hcc---C------CCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 RNT---A------SIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ~~~---~------~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.-+ + +++..+.++|+.||..||.+||++.+++.+
T Consensus 265 aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 265 AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 322 3 344569999999999999999999998764
No 113
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8.2e-32 Score=300.28 Aligned_cols=247 Identities=17% Similarity=0.231 Sum_probs=198.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENID 94 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d 94 (771)
--.|.+.+.+|.|. | +|+.+..+.+++.+|||++.+..- .+...+..+.|-+++.... ||.+++++.+|.+
T Consensus 367 l~~F~~l~vLGkGsFG--kV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT---- 440 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFG--KVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQT---- 440 (694)
T ss_pred ccceEEEEEeccCcCc--eEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccccc----
Confidence 34688899999999 9 999999999999999999997542 2345677888888888875 9999999999997
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
++++|+||||+ +++..+.+...+. +.-...+...|+.||.|||+ +||||||||.+||+++..|.+||+|
T Consensus 441 ----~~~l~fvmey~~Ggdm~~~~~~~~F~----e~rarfyaAev~l~L~fLH~-~~IIYRDlKLdNiLLD~eGh~kiAD 511 (694)
T KOG0694|consen 441 ----KEHLFFVMEYVAGGDLMHHIHTDVFS----EPRARFYAAEVVLGLQFLHE-NGIIYRDLKLDNLLLDTEGHVKIAD 511 (694)
T ss_pred ----CCeEEEEEEecCCCcEEEEEeccccc----HHHHHHHHHHHHHHHHHHHh-cCceeeecchhheEEcccCcEEecc
Confidence 45999999999 4543333333332 22245669999999999996 9999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN---- 248 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~---- 248 (771)
||+|+.-...+ ..+..+++++.|+|||++.+ ..|+.++|.|+||+|||||+.|..||..++-..
T Consensus 512 FGlcKe~m~~g------~~TsTfCGTpey~aPEil~e------~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~Fds 579 (694)
T KOG0694|consen 512 FGLCKEGMGQG------DRTSTFCGTPEFLAPEVLTE------QSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDS 579 (694)
T ss_pred cccccccCCCC------CccccccCChhhcChhhhcc------CcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence 99998754321 23556777889999999988 589999999999999999999999997544322
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCCh----HHHhhCCCCCcchhhhh
Q 004157 249 --------TASIPKSLLPDYQRLLSSMPSRRLNS----SKLIENSEYFQNKLVDT 291 (771)
Q Consensus 249 --------~~~IP~~l~~~i~~lL~~~P~~Rps~----~~lL~~~~fF~n~lv~~ 291 (771)
..-++.+...++++||..+|++|+-. ++-+...+||++.-.+.
T Consensus 580 I~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~ 634 (694)
T KOG0694|consen 580 IVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDD 634 (694)
T ss_pred HhcCCCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHH
Confidence 13466778899999999999999976 34444448998765443
No 114
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.97 E-value=4.8e-31 Score=281.86 Aligned_cols=241 Identities=16% Similarity=0.207 Sum_probs=190.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||++.+..+++.||||++....... .....+.+|+++++.++||||+++++.++..
T Consensus 1 ~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 72 (285)
T cd05605 1 TFRHYRVLGKGGFG--EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK------ 72 (285)
T ss_pred CceEEEEEecCCCe--EEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCC------
Confidence 488999999998 8 99999999999999999997543222 2345567899999999999999999999763
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|..++..... .......+..++.||+.||.|||+ .+++||||+|+||+++++|.++|+|||+
T Consensus 73 --~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05605 73 --DALCLVLTLMNGGDLKFHIYNMGN-PGFDEERAVFYAAEITCGLEDLHR-ERIVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred --CeEEEEEeccCCCcHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHH-CCcEecCCCHHHEEECCCCCEEEeeCCC
Confidence 4899999999 468877765322 112344566779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------h-
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------R- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------~- 247 (771)
+........ .....+...|+|||++.+ ..++.++|+|||||++|++++|..||..... .
T Consensus 149 ~~~~~~~~~-------~~~~~~~~~y~aPE~~~~------~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~ 215 (285)
T cd05605 149 AVEIPEGET-------IRGRVGTVGYMAPEVVKN------ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVER 215 (285)
T ss_pred ceecCCCCc-------cccccCCCCccCcHHhcC------CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHH
Confidence 876543211 011234458999999875 3566789999999999999999998854211 0
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..||.+|| ++.++++| .||..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~-~~~~~ 266 (285)
T cd05605 216 RVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH-PFFRT 266 (285)
T ss_pred HhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC-cCccC
Confidence 0124677789999999999999999 88899988 56654
No 115
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=4.8e-31 Score=281.13 Aligned_cols=244 Identities=17% Similarity=0.175 Sum_probs=191.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.||.|+ | +||++.++.+|..|++|.+.... .+.....+.+|++.+++++||||+++++.+..+
T Consensus 2 ~~~~~~~ig~g~~g--~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------- 71 (286)
T cd06622 2 EIEVLDELGKGNYG--SVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFIE------- 71 (286)
T ss_pred hhhhhhhhcccCCe--EEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecC-------
Confidence 589999999998 8 99999999999999999987542 333456788999999999999999999998864
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|..++.............+.+++.||+.||.|||+.++++||||+|+||+++.+|.+||+|||++
T Consensus 72 -~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 150 (286)
T cd06622 72 -GAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVS 150 (286)
T ss_pred -CeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCc
Confidence 4899999999 4688888764222223455677889999999999996579999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------h--
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------R-- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------~-- 247 (771)
........ ........|++||++.+.-......++.++|+|||||++|++++|..||..... .
T Consensus 151 ~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 222 (286)
T cd06622 151 GNLVASLA--------KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAI 222 (286)
T ss_pred ccccCCcc--------ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHH
Confidence 76543211 111233479999998653221223456789999999999999999988743211 1
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+..++.+||..+|.+||++.++++|+|
T Consensus 223 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~ 264 (286)
T cd06622 223 VDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPW 264 (286)
T ss_pred hhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChh
Confidence 01235567889999999999999999999999843
No 116
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=4.9e-32 Score=276.15 Aligned_cols=248 Identities=20% Similarity=0.283 Sum_probs=197.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
+.|++...||.|+ | .||+|..+.++. .+|||.|..+......-..+.+|+..+|.|+||||+.+..+|...
T Consensus 24 ~~ye~ig~Ig~GTYG--~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~-- 99 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYG--KVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH-- 99 (438)
T ss_pred HHhhccceecccccc--eeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc--
Confidence 5799999999999 9 999998776653 789999987665556667888999999999999999999999763
Q ss_pred CcCCcccEEEEEecCC-cchHHHHHHhCCC--CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC----C
Q 004157 94 DATSTKITIYIVTEPV-MPLSEKIKELGLE--GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT----L 166 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~--~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~----G 166 (771)
...+|+++||. .+|...|+-.... .......++-+++||+.|+.|||+ +-++||||||.||+|..+ |
T Consensus 100 -----d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~-NWvlHRDLKPaNIlvmgdgperG 173 (438)
T KOG0666|consen 100 -----DKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS-NWVLHRDLKPANILVMGDGPERG 173 (438)
T ss_pred -----CceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh-hheeeccCCcceEEEeccCCccC
Confidence 24899999999 4899988764421 223345577889999999999997 889999999999999987 9
Q ss_pred cEEEEccCcccccCCCCCCCCCCcccc-ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh
Q 004157 167 DWKLHAFDVLSEFDGNNEAANGPMLQY-AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE 245 (771)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~-~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~ 245 (771)
.+||+|||+++.+.+.- .|+... .-+++..|+|||++.+. +.|+.++|+|++||++.||++-.|+|.+.+
T Consensus 174 ~VKIaDlGlaR~~~~pl----kpl~s~d~VVVTiWYRAPELLLGa-----~hYT~AiDvWAiGCIfaElLtl~PlF~g~E 244 (438)
T KOG0666|consen 174 RVKIADLGLARLFNNPL----KPLASLDPVVVTIWYRAPELLLGA-----RHYTKAIDVWAIGCIFAELLTLEPLFKGRE 244 (438)
T ss_pred eeEeecccHHHHhhccc----cccccCCceEEEEEecChHHhccc-----ccccchhhhHHHHHHHHHHHccCccccchh
Confidence 99999999999886521 122222 22345589999999986 789999999999999999999887764321
Q ss_pred -------------hhcc---------------CC------------------------------CCcchHHHHHHHhccC
Q 004157 246 -------------LRNT---------------AS------------------------------IPKSLLPDYQRLLSSM 267 (771)
Q Consensus 246 -------------l~~~---------------~~------------------------------IP~~l~~~i~~lL~~~ 267 (771)
+..+ .+ -++...+++.+||+.|
T Consensus 245 ~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yD 324 (438)
T KOG0666|consen 245 EKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYD 324 (438)
T ss_pred hhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccC
Confidence 1100 01 1334667788999999
Q ss_pred CCCCCChHHHhhCCCCCcc
Q 004157 268 PSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 268 P~~Rps~~~lL~~~~fF~n 286 (771)
|.+|+++++.|+| .||..
T Consensus 325 P~kRIta~qAleh-~yF~~ 342 (438)
T KOG0666|consen 325 PIKRITAEQALEH-PYFTE 342 (438)
T ss_pred chhhccHHHHhcc-ccccc
Confidence 9999999999998 77754
No 117
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=7.7e-31 Score=283.76 Aligned_cols=239 Identities=18% Similarity=0.252 Sum_probs=178.3
Q ss_pred cCCCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCccc
Q 004157 24 GDPYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
+.+||.|+ | +||+|+++. ++..|++|.+..... ...+.+|+++|++++||||+++++++.... ..
T Consensus 6 g~~lG~G~~g--~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~ 73 (317)
T cd07867 6 GCKVGRGTYG--HVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSHS------DR 73 (317)
T ss_pred ceEeccCCCe--eEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEeccC------CC
Confidence 45789998 8 999999764 567899999875422 234678999999999999999999987543 34
Q ss_pred EEEEEecCC-cchHHHHHHhCC------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE----cCCCcEE
Q 004157 101 TIYIVTEPV-MPLSEKIKELGL------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV----TQTLDWK 169 (771)
Q Consensus 101 ~iyIVtE~v-~~L~~~L~~~~~------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v----~~~G~~K 169 (771)
.+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||||+||++ +.+|.+|
T Consensus 74 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~~~k 152 (317)
T cd07867 74 KVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA-NWVLHRDLKPANILVMGEGPERGRVK 152 (317)
T ss_pred eEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh-CCEEcCCCCHHHEEEccCCCCCCcEE
Confidence 899999999 568777754321 1112344567779999999999996 899999999999999 5678999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--- 246 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--- 246 (771)
|+|||+++......... .......++..|+|||++.+. ..++.++|+|||||++|||++|.++|...+.
T Consensus 153 l~DfG~a~~~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~-----~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~ 224 (317)
T cd07867 153 IADMGFARLFNSPLKPL---ADLDPVVVTFWYRAPELLLGA-----RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 224 (317)
T ss_pred EeeccceeccCCCcccc---cccCcceecccccCcHHhcCC-----CccCcHHHHHhHHHHHHHHHhCCCCccccccccc
Confidence 99999998664421100 001112334589999998653 3467789999999999999999988742110
Q ss_pred -------------------------hc---c----------------------------CCCCcchHHHHHHHhccCCCC
Q 004157 247 -------------------------RN---T----------------------------ASIPKSLLPDYQRLLSSMPSR 270 (771)
Q Consensus 247 -------------------------~~---~----------------------------~~IP~~l~~~i~~lL~~~P~~ 270 (771)
.. . ......+.+++.+||..||.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~ 304 (317)
T cd07867 225 TSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTK 304 (317)
T ss_pred ccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCccc
Confidence 00 0 011234667899999999999
Q ss_pred CCChHHHhhCCCC
Q 004157 271 RLNSSKLIENSEY 283 (771)
Q Consensus 271 Rps~~~lL~~~~f 283 (771)
|||+.++|+|++|
T Consensus 305 R~t~~e~l~hp~f 317 (317)
T cd07867 305 RITSEQALQDPYF 317 (317)
T ss_pred ccCHHHHhcCCCC
Confidence 9999999999543
No 118
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.97 E-value=3.7e-31 Score=287.40 Aligned_cols=235 Identities=17% Similarity=0.232 Sum_probs=180.8
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhc-CCCCCeeEEeeeEEecccCcCCcccE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRT-VRHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~-LrHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
+.||.|+ | +||+|+++.+++.|+||++.+... .+...+....|...+.. ++||||++++++++.. ..
T Consensus 1 ~~lG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~--------~~ 70 (316)
T cd05592 1 KVLGKGSFG--KVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTK--------EH 70 (316)
T ss_pred CeeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcC--------CE
Confidence 3578888 8 999999999999999999986422 12234445566777765 4799999999999863 48
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+||||||+ ++|..+++.... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~e~~~gg~L~~~~~~~~~---~~~~~~~~~~~qi~~al~~LH~-~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 71 LFFVMEYLNGGDLMFHIQSSGR---FDEARARFYAAEIICGLQFLHK-KGIIYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred EEEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 99999999 578888876543 2334456669999999999996 89999999999999999999999999998764
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------c---
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------N--- 248 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------~--- 248 (771)
..... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...... .
T Consensus 147 ~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~ 214 (316)
T cd05592 147 MNGEG------KASTFCGTPDYIAPEILKG------QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPH 214 (316)
T ss_pred CCCCC------ccccccCCccccCHHHHcC------CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC
Confidence 33211 0112234568999999876 35678899999999999999999988643211 1
Q ss_pred -cCCCCcchHHHHHHHhccCCCCCCChH-HHhhCCCCCcc
Q 004157 249 -TASIPKSLLPDYQRLLSSMPSRRLNSS-KLIENSEYFQN 286 (771)
Q Consensus 249 -~~~IP~~l~~~i~~lL~~~P~~Rps~~-~lL~~~~fF~n 286 (771)
...++..+.+++.+||..+|.+|++.. ++++| +||..
T Consensus 215 ~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h-~~~~~ 253 (316)
T cd05592 215 FPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQH-PFFRG 253 (316)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC-cccCC
Confidence 123567788999999999999999975 56666 66654
No 119
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.97 E-value=4.1e-31 Score=287.07 Aligned_cols=236 Identities=16% Similarity=0.213 Sum_probs=182.5
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcCCcccE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
+.||.|+ | +||+|+++.+|+.|+||++.+... .+.....+.+|.+.++.+ +||||+++++.++.. .+
T Consensus 1 ~~lg~G~~g--~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--------~~ 70 (316)
T cd05620 1 KVLGKGSFG--KVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTK--------EH 70 (316)
T ss_pred CeeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeC--------CE
Confidence 3578887 8 999999999999999999986421 112345567788888764 899999999999863 48
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+|+||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~E~~~~g~L~~~i~~~~~~---~~~~~~~~~~qi~~~l~~lH~-~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05620 71 LFFVMEFLNGGDLMFHIQDKGRF---DLYRATFYAAEIVCGLQFLHS-KGIIYRDLKLDNVMLDRDGHIKIADFGMCKEN 146 (316)
T ss_pred EEEEECCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence 99999999 5788888765332 233455668999999999996 89999999999999999999999999998753
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc-----------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN----------- 248 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~----------- 248 (771)
..... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||.......
T Consensus 147 ~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~ 214 (316)
T cd05620 147 VFGDN------RASTFCGTPDYIAPEILQG------LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPH 214 (316)
T ss_pred ccCCC------ceeccCCCcCccCHHHHcC------CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence 22110 0112334568999999876 356788999999999999999999885432211
Q ss_pred -cCCCCcchHHHHHHHhccCCCCCCChH-HHhhCCCCCcch
Q 004157 249 -TASIPKSLLPDYQRLLSSMPSRRLNSS-KLIENSEYFQNK 287 (771)
Q Consensus 249 -~~~IP~~l~~~i~~lL~~~P~~Rps~~-~lL~~~~fF~n~ 287 (771)
...++..+.+++++||..+|.+|+++. ++++| +||.+.
T Consensus 215 ~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h-~~f~~~ 254 (316)
T cd05620 215 YPRWITKESKDILEKLFERDPTRRLGVVGNIRGH-PFFKTI 254 (316)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC-CCcCCC
Confidence 123556788999999999999999985 66666 778664
No 120
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.97 E-value=9.2e-31 Score=273.88 Aligned_cols=239 Identities=20% Similarity=0.249 Sum_probs=191.2
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|. | ++|.++++.+|+.|+||.+............+.+|++++++++||||+++++.++..
T Consensus 1 ~y~~~~~lg~g~~g--~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (256)
T cd08218 1 KYVKVKKIGEGSFG--KAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEEN------- 71 (256)
T ss_pred CceEEEEeccCCce--EEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCC-------
Confidence 589999999998 8 999999999999999999986544444556789999999999999999999999763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
.+.|+||||+ ++|.+++....... .....+..++.|++.||.|||+ ++++|+||+|+||+++.++.++|+|||++
T Consensus 72 -~~~~lv~e~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~-~~i~h~~l~~~nil~~~~~~~~l~d~~~~ 148 (256)
T cd08218 72 -GNLYIVMDYCEGGDLYKKINAQRGVL-FPEDQILDWFVQICLALKHVHD-RKILHRDIKSQNIFLTKDGTIKLGDFGIA 148 (256)
T ss_pred -CeEEEEEecCCCCcHHHHHHhccCCC-CCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCCCEEEeeccce
Confidence 4899999999 47988887643211 1233455568999999999996 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------- 247 (771)
......... .........|+|||+..+ ...+.++|+|||||++|++++|..++......
T Consensus 149 ~~~~~~~~~------~~~~~~~~~~~~pe~~~~------~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~ 216 (256)
T cd08218 149 RVLNSTVEL------ARTCIGTPYYLSPEICEN------RPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRG 216 (256)
T ss_pred eecCcchhh------hhhccCCccccCHHHhCC------CCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcC
Confidence 766442110 111223457999999876 34567899999999999999999887543211
Q ss_pred ----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 ----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++.+||+.+|.+||++.++++|++
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~ 255 (256)
T cd08218 217 SYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNF 255 (256)
T ss_pred CCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcC
Confidence 11345667899999999999999999999999844
No 121
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.97 E-value=9.7e-31 Score=278.04 Aligned_cols=241 Identities=16% Similarity=0.265 Sum_probs=189.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.++|+.|. | +||+|+++.+|+.|+||++...... .....+.+|+++++.++||||+++++.+...
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------- 70 (284)
T cd07836 1 NFKQLEKLGEGTYA--TVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKHENIVRLHDVIHTE------- 70 (284)
T ss_pred CceEeeeeccCCce--EEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcCCCEeeeeeeEeeC-------
Confidence 589999999997 7 9999999999999999999865332 2345677899999999999999999999874
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...||||||+ ++|.+++.............+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 71 -~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~ 148 (284)
T cd07836 71 -NKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE-NRVLHRDLKPQNLLINKRGELKLADFGLAR 148 (284)
T ss_pred -CcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH-CCeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence 3789999999 6788888765422223445566779999999999996 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---------- 247 (771)
........ .........|++||++.+. ..++.++|+|+|||++|++++|.++|......
T Consensus 149 ~~~~~~~~------~~~~~~~~~y~~PE~~~~~-----~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~ 217 (284)
T cd07836 149 AFGIPVNT------FSNEVVTLWYRAPDVLLGS-----RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIM 217 (284)
T ss_pred hhcCCccc------cccccccccccChHHhcCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence 65432110 0111223479999987653 34567899999999999999999887532100
Q ss_pred ------------c-------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 248 ------------N-------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 248 ------------~-------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
. ...++..+.+++.+||+.+|.+||++.++++|++|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 218 GTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred CCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 0 02346678899999999999999999999998443
No 122
>PTZ00284 protein kinase; Provisional
Probab=99.97 E-value=3.1e-31 Score=303.49 Aligned_cols=237 Identities=16% Similarity=0.210 Sum_probs=181.1
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC------CeeEEeeeEEec
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP------NILAFLHSTEVE 91 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHP------nIlkv~d~~e~e 91 (771)
.+|++.+.||.|+ | +||+|+++.+++.||||++.... .....++.|+++++.++|. +|+++++++..+
T Consensus 129 ~~y~i~~~lG~G~fg--~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 129 QRFKILSLLGEGTFG--KVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred CcEEEEEEEEeccCE--EEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 5699999999998 8 99999999999999999996421 2233456677777777654 588999988754
Q ss_pred ccCcCCcccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC----
Q 004157 92 NIDATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL---- 166 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G---- 166 (771)
..++|||||+++ .|.+++.+... .....+..++.||+.||.|||.+++||||||||+||+++.+|
T Consensus 204 -------~~~~~iv~~~~g~~l~~~l~~~~~---l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~ 273 (467)
T PTZ00284 204 -------TGHMCIVMPKYGPCLLDWIMKHGP---FSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVD 273 (467)
T ss_pred -------CceEEEEEeccCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccc
Confidence 248999999994 68888876532 233446677999999999999646999999999999998776
Q ss_pred ------------cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHH
Q 004157 167 ------------DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (771)
Q Consensus 167 ------------~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el 234 (771)
.+||+|||.+...... .....++..|+|||++.+ ..++.++|||||||++|||
T Consensus 274 ~~~~~~~~~~~~~vkl~DfG~~~~~~~~---------~~~~~gt~~Y~APE~~~~------~~~~~~~DiwSlGvil~el 338 (467)
T PTZ00284 274 PVTNRALPPDPCRVRICDLGGCCDERHS---------RTAIVSTRHYRSPEVVLG------LGWMYSTDMWSMGCIIYEL 338 (467)
T ss_pred cccccccCCCCceEEECCCCccccCccc---------cccccCCccccCcHHhhc------CCCCcHHHHHHHHHHHHHH
Confidence 4999999987543221 112344568999999876 3677899999999999999
Q ss_pred hhCCCCCChhhh--------hccCCC----------------------------------------------CcchHHHH
Q 004157 235 FSGMRLSKTEEL--------RNTASI----------------------------------------------PKSLLPDY 260 (771)
Q Consensus 235 ~~g~~p~~~~~l--------~~~~~I----------------------------------------------P~~l~~~i 260 (771)
++|.+||..... ..+..+ ...+.+++
T Consensus 339 ltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli 418 (467)
T PTZ00284 339 YTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLI 418 (467)
T ss_pred HhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHH
Confidence 999999853210 000111 12245789
Q ss_pred HHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 261 QRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 261 ~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.+||..||.+|+++.++|+| +||..
T Consensus 419 ~~mL~~dP~~R~ta~e~L~H-p~~~~ 443 (467)
T PTZ00284 419 YGLLHYDRQKRLNARQMTTH-PYVLK 443 (467)
T ss_pred HHhCCcChhhCCCHHHHhcC-ccccc
Confidence 99999999999999999999 56654
No 123
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=1.2e-30 Score=280.63 Aligned_cols=252 Identities=16% Similarity=0.257 Sum_probs=189.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|+ | .||+|+++.+++.|+||++......+.....+.+|++.+++++||||+++++++......+...
T Consensus 13 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 13 KYEKLAKIGQGTFG--EVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred heEEEEEeecCCCE--EEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 699999999997 7 9999999999999999998765434334445678999999999999999999987543211112
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...+|+||||+ +.|...+..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||++.
T Consensus 91 ~~~~~lv~e~~~~~l~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~-~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 91 KGSFYLVFEFCEHDLAGLLSNKNV--KFTLSEIKKVMKMLLNGLYYIHR-NKILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred CceEEEEEcCCCcCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 34789999999 567777765431 12345567779999999999996 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------c-c
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------N-T 249 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------~-~ 249 (771)
........... ..........|+|||++.+. ..++.++|+|||||++|+|++|.+++...+.. . .
T Consensus 168 ~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~ 240 (310)
T cd07865 168 AFSLSKNSKPN--RYTNRVVTLWYRPPELLLGE-----RDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLC 240 (310)
T ss_pred cccCCcccCCC--CccCcccCccccCcHHhcCC-----cccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 76542211100 01112334579999987653 23567899999999999999998877432210 0 0
Q ss_pred C------------------------------------CCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 250 A------------------------------------SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 250 ~------------------------------------~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
. .....+.+++.+||..+|.+||+++++++|+||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 241 GSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred CCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 0 012345678999999999999999999999543
No 124
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=1.3e-30 Score=274.86 Aligned_cols=239 Identities=14% Similarity=0.182 Sum_probs=189.4
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.+|.|. | .||+|+++.+++.|+||++..+... ....+++|+..+++++||||+++++.+..+
T Consensus 7 ~~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~~aik~~~~~~~~--~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~---- 78 (267)
T cd06646 7 PQHDYELIQRVGSGTYG--DVYKARNLHTGELAAVKIIKLEPGD--DFSLIQQEIFMVKECKHCNIVAYFGSYLSR---- 78 (267)
T ss_pred chhhcchhheeecCCCe--EEEEEEECCCCeEEEEEEEecCccc--hHHHHHHHHHHHHhcCCCCeeeeeEEEEeC----
Confidence 456799999999998 8 9999999999999999999754322 345688999999999999999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|.+++..... .....+.+++.|++.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 79 ----~~~~iv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nill~~~~~~~l~df 150 (267)
T cd06646 79 ----EKLWICMEYCGGGSLQDIYHVTGP---LSELQIAYVCRETLQGLAYLHS-KGKMHRDIKGANILLTDNGDVKLADF 150 (267)
T ss_pred ----CEEEEEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECCCCCEEECcC
Confidence 4889999999 479888875432 2344567779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-h------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-L------ 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-l------ 246 (771)
|++......... .........|+|||.+.... ...++.++|+|||||++|||++|..|+.... .
T Consensus 151 g~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~~~---~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~ 221 (267)
T cd06646 151 GVAAKITATIAK------RKSFIGTPYWMAPEVAAVEK---NGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM 221 (267)
T ss_pred ccceeecccccc------cCccccCccccCHhHccccc---CCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheee
Confidence 999866432110 11123345799999875321 1235678999999999999999987763211 0
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....++..+.+++++||..+|.+||+++++++|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 222 SKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred ecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 0112356778999999999999999999999987
No 125
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.97 E-value=1.2e-30 Score=281.78 Aligned_cols=247 Identities=19% Similarity=0.242 Sum_probs=190.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCC-CchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTN-AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~--~g~~VaIK~~~~~~-~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+|++.+.||.|+ | .||+|+++. ++..|+||.+.... ..+...+.+.+|+.++++++||||+++++.+....
T Consensus 1 ~y~~~~~ig~g~~g--~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 75 (316)
T cd07842 1 KYEIEGCIGRGTYG--RVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHA--- 75 (316)
T ss_pred CceEEEEeccCCcE--EEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCC---
Confidence 489999999998 8 999999998 89999999998643 12233456788999999999999999999998653
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCC--CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC----CCcE
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLE--GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ----TLDW 168 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~--~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~----~G~~ 168 (771)
...+|+||||+ ++|...+...... .......+..++.||+.||.|||+ .+++||||+|+||+++. +|.+
T Consensus 76 ---~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~i~h~dlkp~Nil~~~~~~~~~~~ 151 (316)
T cd07842 76 ---DKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS-NWVLHRDLKPANILVMGEGPERGVV 151 (316)
T ss_pred ---CceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh-CCEeeCCCCHHHEEEcCCCCccceE
Confidence 24899999999 4677776543321 123455677789999999999996 89999999999999999 9999
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN 248 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~ 248 (771)
||+|||++......... .........+..|+|||++.+. ..++.++|+|||||++|+|++|.++|.......
T Consensus 152 kl~Dfg~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~ 223 (316)
T cd07842 152 KIGDLGLARLFNAPLKP---LADLDPVVVTIWYRAPELLLGA-----RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKI 223 (316)
T ss_pred EECCCccccccCCCccc---ccccCCccccccccCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccc
Confidence 99999998866442110 0111122344579999987653 345678999999999999999998875221100
Q ss_pred -------------------------------------------c---C------------CCCcchHHHHHHHhccCCCC
Q 004157 249 -------------------------------------------T---A------------SIPKSLLPDYQRLLSSMPSR 270 (771)
Q Consensus 249 -------------------------------------------~---~------------~IP~~l~~~i~~lL~~~P~~ 270 (771)
. . ..+..+.+++.+||..+|++
T Consensus 224 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~ 303 (316)
T cd07842 224 KKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTK 303 (316)
T ss_pred cccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCccc
Confidence 0 0 23445778899999999999
Q ss_pred CCChHHHhhCCCC
Q 004157 271 RLNSSKLIENSEY 283 (771)
Q Consensus 271 Rps~~~lL~~~~f 283 (771)
||++.++++|++|
T Consensus 304 Rps~~eil~~~~f 316 (316)
T cd07842 304 RITAEEALEHPYF 316 (316)
T ss_pred CcCHHHHhcCCCC
Confidence 9999999999543
No 126
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.97 E-value=1.3e-30 Score=275.58 Aligned_cols=242 Identities=16% Similarity=0.243 Sum_probs=190.4
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc--------hhHHHHHHHHHHHHhcCCCCCeeEEeeeEE
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ--------DGHLAAARNGVKRLRTVRHPNILAFLHSTE 89 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~--------~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e 89 (771)
|+|.+.+.+|.|+ | +||+|.++.+|+.|+||.+...... ....+.+++|+..++.++||||++++++++
T Consensus 1 ~~~~~~~~lg~g~~~--~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 78 (272)
T cd06629 1 FKWVKGELIGKGTYG--RVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET 78 (272)
T ss_pred CceeecceecccCce--EEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec
Confidence 6899999999998 7 9999999999999999998643211 123456788999999999999999999987
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~ 167 (771)
.. ..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.
T Consensus 79 ~~--------~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~~~nil~~~~~~ 146 (272)
T cd06629 79 TE--------EYLSIFLEYVPGGSIGSCLRTYGR---FEEQLVRFFTEQVLEGLAYLHS-KGILHRDLKADNLLVDADGI 146 (272)
T ss_pred cC--------CceEEEEecCCCCcHHHHHhhccC---CCHHHHHHHHHHHHHHHHHHhh-CCeeecCCChhhEEEcCCCe
Confidence 53 4899999999 579998877532 2344566679999999999996 89999999999999999999
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL- 246 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l- 246 (771)
+||+|||++........ ............|++||+..... ..++.++|+||||+++|++++|..|+...+.
T Consensus 147 ~~l~d~~~~~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~~~----~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~ 218 (272)
T cd06629 147 CKISDFGISKKSDDIYD----NDQNMSMQGSVFWMAPEVIHSYS----QGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI 218 (272)
T ss_pred EEEeecccccccccccc----ccccccccCCccccCHHHhcccc----CCCCccchhHHHHHHHHHHHhCCCCCcCcchH
Confidence 99999999876543110 00011122345799999976531 2366789999999999999999988753221
Q ss_pred ---h--------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 ---R--------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 ---~--------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
. ....++..+.+++.+||..+|..||++.++++|++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 271 (272)
T cd06629 219 AAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPF 271 (272)
T ss_pred HHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCC
Confidence 0 01245778999999999999999999999999953
No 127
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.97 E-value=1.4e-30 Score=276.59 Aligned_cols=246 Identities=16% Similarity=0.167 Sum_probs=188.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHH-HHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVK-RLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~-~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.||.|+ | .||+|+++.+|+.|+||++......+.... +..|+. .++.+.||||++++++++.+
T Consensus 2 ~~~~~~~ig~g~~g--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~iv~~~~~~~~~------ 72 (283)
T cd06617 2 DLEVIEELGRGAYG--VVDKMRHVPTGTIMAVKRIRATVNSQEQKR-LLMDLDISMRSVDCPYTVTFYGALFRE------ 72 (283)
T ss_pred CceEEEEecccCCe--EEEEEEEcCCCcEEEEEEEecCCCcHHHHH-HHHHHHHHHHHcCCCCeeeeeEEEecC------
Confidence 589999999998 8 999999999999999999987544333333 334555 46778899999999999863
Q ss_pred cccEEEEEecCC-cchHHHHHHhC-CCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~-~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|.+++.... .........+..++.||+.||.|||+.++++||||+|+||+++.++.+||+|||+
T Consensus 73 --~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~ 150 (283)
T cd06617 73 --GDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGI 150 (283)
T ss_pred --CcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 3789999999 67888776532 2222345556677999999999999745999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-----hhhc--
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-----ELRN-- 248 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-----~l~~-- 248 (771)
+....... ..........|+|||++.+... ...++.++|+|+|||++|+|++|..|+... .+..
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~--~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~ 221 (283)
T cd06617 151 SGYLVDSV-------AKTIDAGCKPYMAPERINPELN--QKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVV 221 (283)
T ss_pred cccccccc-------ccccccCCccccChhhcCCccc--ccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHH
Confidence 87654311 0111233457999998865211 134567899999999999999999887531 1111
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 249 --------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 --------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
...+|..+.+++.+||..+|.+||++.++++| +||.+
T Consensus 222 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~-~~~~~ 266 (283)
T cd06617 222 EEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH-PFFEL 266 (283)
T ss_pred hcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC-chhhh
Confidence 12467789999999999999999999999998 55543
No 128
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=4e-31 Score=289.04 Aligned_cols=250 Identities=17% Similarity=0.252 Sum_probs=195.4
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++.+.||.|+ | .||+|+++.+|+.|+||++............+.+|+.+|+.++||||++++++++....+
T Consensus 4 ~~~y~~~~~lg~g~~g--~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~-- 79 (334)
T cd07855 4 GSRYKPIENIGSGAYG--VVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGAD-- 79 (334)
T ss_pred hhceeeeeeeecCCCe--EEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCC--
Confidence 35799999999987 7 999999999999999999986543334456678899999999999999999988754322
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
...+|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 80 --~~~~~lv~e~~~~~l~~~~~~~~~---~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~Nil~~~~~~~kl~dfg~ 153 (334)
T cd07855 80 --FKDVYVVMDLMESDLHHIIHSDQP---LTEEHIRYFLYQLLRGLKYIHS-ANVIHRDLKPSNLLVNEDCELRIGDFGM 153 (334)
T ss_pred --CceEEEEEehhhhhHHHHhccCCC---CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCCcEEeccccc
Confidence 45899999999 567777754432 3345567779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------- 246 (771)
+.......... .........+..|+|||.+.+. ..++.++|+|||||++|+|++|.+||.....
T Consensus 154 ~~~~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~-----~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~ 226 (334)
T cd07855 154 ARGLSSSPTEH--KYFMTEYVATRWYRAPELLLSL-----PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILS 226 (334)
T ss_pred ceeecccCcCC--CcccccccccccccChHHhcCC-----cccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHH
Confidence 87664422111 1111123445589999987542 2466789999999999999999988743210
Q ss_pred ------------------h----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 ------------------R----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 ------------------~----------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
. ....++..+.+++++||+.+|.+||++.+++.| +||.
T Consensus 227 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~-~~~~ 298 (334)
T cd07855 227 VLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH-PFLA 298 (334)
T ss_pred HhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC-hhhh
Confidence 0 012357788999999999999999999999998 4443
No 129
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.97 E-value=6.7e-31 Score=287.21 Aligned_cols=247 Identities=14% Similarity=0.142 Sum_probs=189.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCC-CchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTN-AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~-~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||.++++.+++.|+||++.+.. ......+.+++|+.+++.++||||++++++++.+
T Consensus 2 ~y~~~~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------ 73 (331)
T cd05597 2 DFEILKVIGRGAFG--EVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDE------ 73 (331)
T ss_pred CceEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecC------
Confidence 599999999998 8 99999999999999999997532 1223456688899999999999999999999864
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++|+||||+ ++|.+++.+... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 148 (331)
T cd05597 74 --NNLYLVMDYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVLAIDSVHQ-LGYVHRDIKPDNVLLDKNGHIRLADFGS 148 (331)
T ss_pred --CeEEEEEecCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh-CCeEECCCCHHHEEECCCCCEEEEECCc
Confidence 4899999999 579999876421 12344466679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+........ .......++..|+|||++...-. ....++.++|+|||||++|+|++|..||......
T Consensus 149 ~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~ 222 (331)
T cd05597 149 CLRLLADGT-----VQSNVAVGTPDYISPEILQAMED-GKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 222 (331)
T ss_pred eeecCCCCC-----ccccceeccccccCHHHHhhccc-cccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHc
Confidence 876543211 11111234558999999863100 0124567899999999999999999988543211
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCC--CCCChHHHhhCCCCCcc
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPS--RRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~--~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++++||...+. .|+++.++++| +||..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h-p~~~~ 271 (331)
T cd05597 223 HKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH-PFFEG 271 (331)
T ss_pred CCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC-CCCCC
Confidence 0123677789999998865443 48899999999 55543
No 130
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.97 E-value=1.4e-30 Score=278.64 Aligned_cols=247 Identities=17% Similarity=0.232 Sum_probs=191.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.+|.|. | +||+|.++.+|+.|+||++............+.+|+.+++.++ ||||+++++++.....++
T Consensus 2 ~y~~~~~lg~g~~g--~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~-- 77 (295)
T cd07837 2 AYEKLEKIGEGTYG--KVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNG-- 77 (295)
T ss_pred CceEeeEecccCCe--EEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCC--
Confidence 599999999998 8 9999999999999999998765443334456788999999996 699999999987654211
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCC--CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-CCcEEEEcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLE--GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLHAF 173 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~--~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~-~G~~KL~dF 173 (771)
...+|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||+|+||+++. ++.+||+||
T Consensus 78 -~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~-~~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 78 -KPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK-HGVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred -CceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCChHHEEEecCCCeEEEeec
Confidence 23589999999 5788877654321 223455667779999999999996 89999999999999998 899999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++........ . .........|+|||++.+. ..++.++|+|||||++|+|++|.+||.....
T Consensus 156 g~~~~~~~~~~----~--~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~ 224 (295)
T cd07837 156 GLGRAFSIPVK----S--YTHEIVTLWYRAPEVLLGS-----THYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHI 224 (295)
T ss_pred ccceecCCCcc----c--cCCcccccCCCChHHhhCC-----CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 99876533111 0 0111234579999987643 3456789999999999999999987743210
Q ss_pred ---------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 247 ---------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 247 ---------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
.....++..+.+++.+||..+|.+||++.+++.| +||
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~-~~~ 294 (295)
T cd07837 225 FKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH-PYF 294 (295)
T ss_pred HHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC-CCc
Confidence 0013467778999999999999999999999999 444
No 131
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.97 E-value=1.3e-30 Score=279.03 Aligned_cols=243 Identities=16% Similarity=0.278 Sum_probs=189.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|. | +||+|+++.+|+.|+||++......+.....+.+|++++++++||||+++++++...
T Consensus 3 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 73 (294)
T PLN00009 3 QYEKVEKIGEGTYG--VVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE------- 73 (294)
T ss_pred ceEEEEEecCCCCE--EEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecC-------
Confidence 599999999987 7 999999999999999999976544444456788999999999999999999999863
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-CCcEEEEccCcc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~-~G~~KL~dFgla 176 (771)
..+|+||||+ ++|..++...... ......+...+.||+.||.|||+ .+++||||+|+||+++. ++.+||+|||++
T Consensus 74 -~~~~lv~e~~~~~l~~~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~-~~i~H~dl~p~nill~~~~~~~kl~dfg~~ 150 (294)
T PLN00009 74 -KRLYLVFEYLDLDLKKHMDSSPDF-AKNPRLIKTYLYQILRGIAYCHS-HRVLHRDLKPQNLLIDRRTNALKLADFGLA 150 (294)
T ss_pred -CeEEEEEecccccHHHHHHhCCCC-CcCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCCcceEEEECCCCEEEEcccccc
Confidence 4899999999 5677777654322 12344455668999999999996 89999999999999985 557999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h-----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~----- 247 (771)
......... .........|+|||++.+. ..+..++|+|||||++|+|++|.++|..... .
T Consensus 151 ~~~~~~~~~------~~~~~~~~~y~~PE~~~~~-----~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~ 219 (294)
T PLN00009 151 RAFGIPVRT------FTHEVVTLWYRAPEILLGS-----RHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRI 219 (294)
T ss_pred cccCCCccc------cccCceeecccCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 755331100 0111233479999987652 3456789999999999999999988743210 0
Q ss_pred --------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 --------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 --------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+||++.++++| +||.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~-~~~~~ 289 (294)
T PLN00009 220 LGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH-EYFKD 289 (294)
T ss_pred hCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC-chHhH
Confidence 012456778899999999999999999999998 56654
No 132
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.97 E-value=3.7e-31 Score=288.37 Aligned_cols=235 Identities=15% Similarity=0.192 Sum_probs=179.8
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHH-HHHHhcCCCCCeeEEeeeEEecccCcCCcccE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNG-VKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~e-i~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
+.||.|+ | +||+|+++.+++.|+||++.+.... ......+.+| ...++.++||||+++++.++.. ..
T Consensus 1 ~~lg~G~fg--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~--------~~ 70 (325)
T cd05602 1 KVIGKGSFG--KVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA--------DK 70 (325)
T ss_pred CeeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcC--------Ce
Confidence 3578887 8 9999999999999999999864221 1122233333 3457889999999999999864 48
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+|+||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~e~~~~~~L~~~~~~~~~~---~~~~~~~~~~qi~~~L~~lH~-~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~ 146 (325)
T cd05602 71 LYFVLDYINGGELFYHLQRERCF---LEPRARFYAAEIASALGYLHS-LNIVYRDLKPENILLDSQGHIVLTDFGLCKEN 146 (325)
T ss_pred EEEEEeCCCCCcHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence 99999999 4788888764422 234455668999999999996 89999999999999999999999999998754
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh------------h
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------------R 247 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------------~ 247 (771)
..... ......++..|+|||++.+ ..++.++|+|||||++|+|++|.+||..... .
T Consensus 147 ~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~ 214 (325)
T cd05602 147 IEHNG------TTSTFCGTPEYLAPEVLHK------QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQ 214 (325)
T ss_pred ccCCC------CcccccCCccccCHHHHcC------CCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcC
Confidence 32111 0112234568999999876 3567899999999999999999998854321 1
Q ss_pred ccCCCCcchHHHHHHHhccCCCCCCChH----HHhhCCCCCcc
Q 004157 248 NTASIPKSLLPDYQRLLSSMPSRRLNSS----KLIENSEYFQN 286 (771)
Q Consensus 248 ~~~~IP~~l~~~i~~lL~~~P~~Rps~~----~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+|++.. ++++| .||..
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~-~~~~~ 256 (325)
T cd05602 215 LKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNH-IFFSP 256 (325)
T ss_pred CCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcC-cccCC
Confidence 1235778899999999999999999876 66666 45543
No 133
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.97 E-value=2.2e-30 Score=271.07 Aligned_cols=241 Identities=20% Similarity=0.223 Sum_probs=193.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|+ | +||++.++.+|..|++|++..+.......+.+.+|++++++++||||+++++.+....
T Consensus 1 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------ 72 (265)
T cd08217 1 DYEVLETIGKGSFG--TVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRS------ 72 (265)
T ss_pred CceeeeeeccCCCe--EEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCC------
Confidence 489999999987 7 9999999999999999999866555555677889999999999999999999886543
Q ss_pred ccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHH-----cCCCceecCCCCCCEEEcCCCcEEE
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLN-----NDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH-----~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
+..+|++|||+ ++|.+++..... ........+..++.||+.||.||| + .+++||||+|+||+++.+|.+||
T Consensus 73 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~-~~i~h~dl~p~nili~~~~~~kl 151 (265)
T cd08217 73 NQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPG-NTVLHRDLKPANIFLDANNNVKL 151 (265)
T ss_pred CCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCcccc-CcceecCCCHHHEEEecCCCEEE
Confidence 34789999999 479988876421 122234456677999999999999 6 78999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--- 247 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--- 247 (771)
+|||++......... .........|+|||++.+. .++.++|+|+||+++|+|++|..|+......
T Consensus 152 ~d~g~~~~~~~~~~~------~~~~~~~~~~~~pE~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 219 (265)
T cd08217 152 GDFGLAKILGHDSSF------AKTYVGTPYYMSPEQLNHM------SYDEKSDIWSLGCLIYELCALSPPFTARNQLQLA 219 (265)
T ss_pred ecccccccccCCccc------ccccccCCCccChhhhcCC------CCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHH
Confidence 999999876542210 1122345589999998763 4567899999999999999999887543211
Q ss_pred ----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 248 ----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 248 ----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
....++..+.+++.+||+.+|.+||++.++++|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~ 263 (265)
T cd08217 220 SKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLP 263 (265)
T ss_pred HHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCC
Confidence 1124567789999999999999999999999983
No 134
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=7.7e-31 Score=289.88 Aligned_cols=234 Identities=12% Similarity=0.120 Sum_probs=182.1
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++.+.||.|+ | +||+|+++.++..|++|+.... ...+|+.++++++||||+++++++...
T Consensus 65 ~~~y~~~~~lg~G~~g--~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 129 (357)
T PHA03209 65 SLGYTVIKTLTPGSEG--RVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVSG----- 129 (357)
T ss_pred hcCcEEEEEecCCCCe--EEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEeC-----
Confidence 45799999999998 8 9999999999999999985432 234689999999999999999999863
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
...|+|+|++ ++|..++...... .....+..++.||+.||.|||+ .+++||||||+||+++..+.+||+|||+
T Consensus 130 ---~~~~lv~e~~~~~l~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~Nill~~~~~~kl~DfG~ 203 (357)
T PHA03209 130 ---AITCMVLPHYSSDLYTYLTKRSRP--LPIDQALIIEKQILEGLRYLHA-QRIIHRDVKTENIFINDVDQVCIGDLGA 203 (357)
T ss_pred ---CeeEEEEEccCCcHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEEecCcc
Confidence 3789999999 6788888654321 2334456679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCC-CCChh----------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR-LSKTE---------- 244 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~-p~~~~---------- 244 (771)
+........ .....++..|+|||++.+ ..++.++|+|||||++|||+++.. +|...
T Consensus 204 a~~~~~~~~-------~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~ 270 (357)
T PHA03209 204 AQFPVVAPA-------FLGLAGTVETNAPEVLAR------DKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKS 270 (357)
T ss_pred ccccccCcc-------cccccccccccCCeecCC------CCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHH
Confidence 875332110 112234458999999876 356789999999999999998543 22210
Q ss_pred ---hh----h--------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 245 ---EL----R--------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 245 ---~l----~--------------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.+ . ....++..+..++.+||+.||.+|||+.++|+
T Consensus 271 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~ 350 (357)
T PHA03209 271 CHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN 350 (357)
T ss_pred HHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence 00 0 00134556677899999999999999999999
Q ss_pred CCCCCcc
Q 004157 280 NSEYFQN 286 (771)
Q Consensus 280 ~~~fF~n 286 (771)
| +||++
T Consensus 351 h-p~f~~ 356 (357)
T PHA03209 351 Y-PMFAQ 356 (357)
T ss_pred C-chhcc
Confidence 9 56653
No 135
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.97 E-value=3.8e-31 Score=287.67 Aligned_cols=234 Identities=15% Similarity=0.202 Sum_probs=177.7
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHH-HHHhcCCCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGV-KRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei-~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
.||.|+ | +||+|+++.+|+.|+||++.+.... ......+.+|. .+++.++||||+++++.++.. ..+
T Consensus 2 ~lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~--------~~~ 71 (321)
T cd05603 2 VIGKGSFG--KVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTA--------EKL 71 (321)
T ss_pred eeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcC--------CEE
Confidence 578887 7 9999999999999999999864221 12223344444 467899999999999998763 489
Q ss_pred EEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
||||||| ++|...+..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~L~~lH~-~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~ 147 (321)
T cd05603 72 YFVLDYVNGGELFFHLQRERC---FLEPRARFYAAEVASAIGYLHS-LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGV 147 (321)
T ss_pred EEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECCCCCEEEccCCCCccCC
Confidence 9999999 478887765432 2234456679999999999996 899999999999999999999999999987542
Q ss_pred CCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc------------
Q 004157 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------------ 248 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~------------ 248 (771)
.... ......++..|+|||++.+ ..++.++|+|||||++|||++|..||...+...
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~ 215 (321)
T cd05603 148 EPEE------TTSTFCGTPEYLAPEVLRK------EPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQL 215 (321)
T ss_pred CCCC------ccccccCCcccCCHHHhcC------CCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCC
Confidence 2111 0112234558999999875 356778999999999999999999986443211
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCChH----HHhhCCCCCcc
Q 004157 249 TASIPKSLLPDYQRLLSSMPSRRLNSS----KLIENSEYFQN 286 (771)
Q Consensus 249 ~~~IP~~l~~~i~~lL~~~P~~Rps~~----~lL~~~~fF~n 286 (771)
....+..+.+++.+||+.+|.+|++.. ++++| .||.+
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~-~~~~~ 256 (321)
T cd05603 216 PGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNH-VFFSP 256 (321)
T ss_pred CCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCC-CCcCC
Confidence 123445688999999999999999764 77777 56644
No 136
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.97 E-value=1.4e-30 Score=281.96 Aligned_cols=248 Identities=16% Similarity=0.215 Sum_probs=193.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.||.|+ | +||.|.+..+++.|+||.+....... .....+.+|++.|+.++||||+++++.++..
T Consensus 2 ~y~~~~~ig~g~~g--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------ 73 (316)
T cd05574 2 HFKKIKLLGKGDVG--RVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTE------ 73 (316)
T ss_pred ceEEeeeecCCccE--EEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecC------
Confidence 589999999998 8 99999999999999999998754332 3566788999999999999999999998763
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|.+++..... .......+..++.||+.||.|||+ .+++||||||+||+++.+|.++|+|||+
T Consensus 74 --~~~~lv~e~~~~~~L~~~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~~l~dfg~ 149 (316)
T cd05574 74 --TYLCLVMDYCPGGELFRLLQRQPG-KCLSEEVARFYAAEVLLALEYLHL-LGIVYRDLKPENILLHESGHIMLSDFDL 149 (316)
T ss_pred --CEEEEEEEecCCCCHHHHHHhCCC-CccCHHHHHHHHHHHHHHHHHHHH-CCeeccCCChHHeEEcCCCCEEEeecch
Confidence 4899999999 579888875421 122334466678999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCC-----------------------CccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHH
Q 004157 176 LSEFDGNNEAANG-----------------------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (771)
Q Consensus 176 a~~~~~~~~~~~~-----------------------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~ 232 (771)
+............ ........++..|+|||++.+ ..++.++|+|||||++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~Di~slG~ll~ 223 (316)
T cd05574 150 SKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG------DGHGSAVDWWTLGILLY 223 (316)
T ss_pred hhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcC------CCCCchHHHHHHHHHHH
Confidence 8765432111000 000011233447999999876 34667899999999999
Q ss_pred HHhhCCCCCChhhh----h----------ccCCCCcchHHHHHHHhccCCCCCCC----hHHHhhCCCCCcc
Q 004157 233 ELFSGMRLSKTEEL----R----------NTASIPKSLLPDYQRLLSSMPSRRLN----SSKLIENSEYFQN 286 (771)
Q Consensus 233 el~~g~~p~~~~~l----~----------~~~~IP~~l~~~i~~lL~~~P~~Rps----~~~lL~~~~fF~n 286 (771)
+|++|..||...+. . ....+|..+.+++.+||..+|.+||+ +.+++.| +||++
T Consensus 224 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~-~~~~~ 294 (316)
T cd05574 224 EMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH-PFFRG 294 (316)
T ss_pred HHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC-chhhc
Confidence 99999988753221 1 11225778999999999999999999 9999998 56654
No 137
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.97 E-value=3e-31 Score=289.00 Aligned_cols=235 Identities=16% Similarity=0.205 Sum_probs=180.1
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHH-HHhcCCCCCeeEEeeeEEecccCcCCcccE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVK-RLRTVRHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~-~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
+.||.|+ | +||.|+++.+|+.|+||++.+.... ......+.+|.. +++.++||||+++++.++.+ ..
T Consensus 1 ~~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~--------~~ 70 (325)
T cd05604 1 KVIGKGSFG--KVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTT--------EK 70 (325)
T ss_pred CceeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecC--------CE
Confidence 3578887 7 9999999999999999999864221 122233444544 57789999999999999863 48
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+|+||||+ +.|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~lH~-~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 71 LYFVLDFVNGGELFFHLQRERS---FPEPRARFYAAEIASALGYLHS-INIVYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (325)
T ss_pred EEEEEcCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence 99999999 468887765432 2344566679999999999996 89999999999999999999999999998754
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------ 247 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------ 247 (771)
..... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+..
T Consensus 147 ~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~ 214 (325)
T cd05604 147 IAQSD------TTTTFCGTPEYLAPEVIRK------QPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLV 214 (325)
T ss_pred CCCCC------CcccccCChhhCCHHHHcC------CCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCcc
Confidence 32111 0112234558999999876 35677999999999999999999988543211
Q ss_pred ccCCCCcchHHHHHHHhccCCCCCCCh----HHHhhCCCCCcc
Q 004157 248 NTASIPKSLLPDYQRLLSSMPSRRLNS----SKLIENSEYFQN 286 (771)
Q Consensus 248 ~~~~IP~~l~~~i~~lL~~~P~~Rps~----~~lL~~~~fF~n 286 (771)
....++..+.+++++||..+|.+||+. .++++| +||..
T Consensus 215 ~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h-~~f~~ 256 (325)
T cd05604 215 LRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEH-PFFES 256 (325)
T ss_pred CCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcC-CCcCC
Confidence 113466778899999999999999986 478887 57754
No 138
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.97 E-value=1.1e-30 Score=277.67 Aligned_cols=240 Identities=17% Similarity=0.284 Sum_probs=189.0
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|++.+.+|.|. | +||+|+++.+|..|+||++..+.........+.+|++.++.++||||+++++++...
T Consensus 1 y~~~~~l~~g~~~--~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~-------- 70 (283)
T cd07835 1 YQKVEKIGEGTYG--VVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSE-------- 70 (283)
T ss_pred CchheEecCCCCe--EEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccC--------
Confidence 77888999987 7 999999999999999999986544444445678899999999999999999998763
Q ss_pred cEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 100 ITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 100 ~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
...|+||||+ .+|.+++..... .......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++..
T Consensus 71 ~~~~iv~e~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~-~~~~H~dl~p~nil~~~~~~~~l~df~~~~~ 148 (283)
T cd07835 71 NKLYLVFEFLDLDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHS-HRVLHRDLKPQNLLIDREGALKLADFGLARA 148 (283)
T ss_pred CeEEEEEeccCcCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHH-CCeeCCCCCHHHEEEcCCCcEEEeecccccc
Confidence 4899999999 578888876542 112344466679999999999996 8999999999999999999999999999876
Q ss_pred cCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh------------
Q 004157 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------------ 246 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------------ 246 (771)
....... .........|+|||++.+. ..++.++|+|||||++|+|++|.+||.....
T Consensus 149 ~~~~~~~------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~ 217 (283)
T cd07835 149 FGVPVRT------YTHEVVTLWYRAPEILLGS-----RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLG 217 (283)
T ss_pred cCCCccc------cCccccccCCCCCceeecC-----cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 5432110 0111224579999987652 2356789999999999999999988742210
Q ss_pred -----------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 247 -----------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 247 -----------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
.....++..+.+++.+||+.+|.+||++.++++|.||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 218 TPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred CCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 0013456778899999999999999999999998543
No 139
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.97 E-value=2.9e-30 Score=270.15 Aligned_cols=237 Identities=22% Similarity=0.260 Sum_probs=192.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|. | .||.++.+.+++.|++|.+............+.+|+.++++++||||++++++++..
T Consensus 1 ~y~~~~~ig~g~~g--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------- 71 (256)
T cd08221 1 HYIPIRVLGKGAFG--EATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDD------- 71 (256)
T ss_pred CceEeeEecccCCc--eEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecC-------
Confidence 589999999998 8 888888889999999999987655555566788999999999999999999999864
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||| ++|.+++..... .......+..++.|++.+|.|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 72 -~~~~~~~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~ni~~~~~~~~kl~d~~~~ 148 (256)
T cd08221 72 -NTLLIEMEYANGGTLYDKIVRQKG-QLFEEEMVLWYLFQIVSAVSYIHK-AGILHRDIKTLNIFLTKAGLIKLGDFGIS 148 (256)
T ss_pred -CeEEEEEEecCCCcHHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCChHhEEEeCCCCEEECcCcce
Confidence 3899999999 579998876531 122344566779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc--------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~-------- 248 (771)
......... ......+..|.|||+..+ ..++.++|+|||||++|+|++|..++.......
T Consensus 149 ~~~~~~~~~------~~~~~~~~~y~ape~~~~------~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~ 216 (256)
T cd08221 149 KILGSEYSM------AETVVGTPYYMSPELCQG------VKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQG 216 (256)
T ss_pred EEccccccc------ccccCCCccccCHhhcCC------CCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC
Confidence 766442210 111234558999999865 245678999999999999999998875432111
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 249 -----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 249 -----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...++..+.+++.+||..+|.+||++.+++++
T Consensus 217 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 217 NYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred CCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 13356778999999999999999999999988
No 140
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.97 E-value=1.6e-30 Score=276.58 Aligned_cols=234 Identities=18% Similarity=0.222 Sum_probs=180.0
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
||.|+ | +||++.++.+|+.|++|++..+.... .....+..|++++++++||||+++++.++.. .++|+
T Consensus 1 lg~G~~g--~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~--------~~~~l 70 (277)
T cd05607 1 LGKGGFG--EVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESK--------THLCL 70 (277)
T ss_pred CCCCCce--EEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecC--------CeEEE
Confidence 46777 7 99999999999999999997532221 2234456799999999999999999999863 48999
Q ss_pred EecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCC
Q 004157 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (771)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~ 182 (771)
||||+ ++|..++....... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 71 v~e~~~g~~L~~~~~~~~~~~-~~~~~~~~~~~qi~~al~~lH~-~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 71 VMSLMNGGDLKYHIYNVGERG-LEMERVIHYSAQITCGILHLHS-MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG 148 (277)
T ss_pred EEecCCCCCHHHHHHhccccC-CCHHHHHHHHHHHHHHHHHHHH-CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC
Confidence 99999 47888776543222 2233345568999999999996 89999999999999999999999999998766432
Q ss_pred CCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-------h-h-------
Q 004157 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------L-R------- 247 (771)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-------l-~------- 247 (771)
.. .....++..|+|||++.+. .++.++|+|||||++|+|++|..||.... + .
T Consensus 149 ~~-------~~~~~~~~~y~aPE~~~~~------~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 215 (277)
T cd05607 149 KT-------ITQRAGTNGYMAPEILKEE------PYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEV 215 (277)
T ss_pred ce-------eeccCCCCCccCHHHHccC------CCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccc
Confidence 11 1112344589999998763 46789999999999999999998875311 0 0
Q ss_pred --ccCCCCcchHHHHHHHhccCCCCCCCh----HHHhhCCCCCcc
Q 004157 248 --NTASIPKSLLPDYQRLLSSMPSRRLNS----SKLIENSEYFQN 286 (771)
Q Consensus 248 --~~~~IP~~l~~~i~~lL~~~P~~Rps~----~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+||++ ++++.| .||+.
T Consensus 216 ~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h-~~f~~ 259 (277)
T cd05607 216 KFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKH-EFFKT 259 (277)
T ss_pred ccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcC-hhhcC
Confidence 013467889999999999999999999 455566 55543
No 141
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=1.1e-30 Score=280.95 Aligned_cols=250 Identities=18% Similarity=0.247 Sum_probs=197.6
Q ss_pred hhhhhhhhcCCCCCCCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC
Q 004157 2 FKFLKGVVGGSGAGVKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN 80 (771)
Q Consensus 2 ~~~l~~~~~~s~~~~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPn 80 (771)
|++++..++-.. +..+|++.+.+|.|. | +||+|++..+|+.|+||.+...... ..+.+.+|+..++.++|||
T Consensus 5 ~~~~~~~~~~~~---~~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~h~~ 77 (296)
T cd06655 5 MEKLRTIVSIGD---PKKKYTRYEKIGQGASG--TVFTAIDVATGQEVAIKQINLQKQP--KKELIINEILVMKELKNPN 77 (296)
T ss_pred HHHHHHHHhcCC---CcceEEEEEEEecCCCe--EEEEEEEcCCCcEEEEEEEecccCc--hHHHHHHHHHHHHhcCCCc
Confidence 345555553222 456799999999998 8 9999999999999999999764332 3466889999999999999
Q ss_pred eeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCC
Q 004157 81 ILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (771)
Q Consensus 81 Ilkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~ 158 (771)
|+++++.+... ..+|+|+||+ ++|..++..... ....+..++.|++.||.|||+ .+++||||+|+
T Consensus 78 iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~~~~~~l----~~~~~~~i~~~l~~al~~LH~-~~i~H~dL~p~ 144 (296)
T cd06655 78 IVNFLDSFLVG--------DELFVVMEYLAGGSLTDVVTETCM----DEAQIAAVCRECLQALEFLHA-NQVIHRDIKSD 144 (296)
T ss_pred eeeeeeeEecC--------ceEEEEEEecCCCcHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHH
Confidence 99999999763 4899999999 478888876432 234566779999999999996 89999999999
Q ss_pred CEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCC
Q 004157 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238 (771)
Q Consensus 159 NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~ 238 (771)
||+++.+|.+||+|||++......... .........|+|||.+.+ ..++.++|+|||||++|++++|.
T Consensus 145 Nili~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slGvil~~lltg~ 212 (296)
T cd06655 145 NVLLGMDGSVKLTDFGFCAQITPEQSK------RSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMVEGE 212 (296)
T ss_pred HEEECCCCCEEEccCccchhccccccc------CCCcCCCccccCcchhcC------CCCCchhhHHHHHHHHHHHHhCC
Confidence 999999999999999998765432110 111123447999999875 34667899999999999999999
Q ss_pred CCCChhhh---------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 239 RLSKTEEL---------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 239 ~p~~~~~l---------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
.||...+. .....++..+.+++.+||..+|.+||++.+++.|+ ||
T Consensus 213 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~-~~ 272 (296)
T cd06655 213 PPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHP-FL 272 (296)
T ss_pred CCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhCh-Hh
Confidence 88754211 11234667789999999999999999999999984 44
No 142
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.97 E-value=1.8e-30 Score=273.99 Aligned_cols=244 Identities=14% Similarity=0.191 Sum_probs=187.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
.+|++++.+|.|+ | .||+|.++.+|..|++|++...... ......+++|+.+++.++||||++++++++...
T Consensus 2 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 77 (266)
T cd06651 2 INWRRGKLLGQGAFG--RVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRA-- 77 (266)
T ss_pred CCccccceecCCCCE--EEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCC--
Confidence 4699999999998 8 9999999999999999998754322 234567889999999999999999999987643
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
...+|+++||+ ++|.+++...... ....+..++.||+.||.|||+ ++++||||+|+||+++.++.+||+|
T Consensus 78 ----~~~~~l~~e~~~~~~L~~~l~~~~~l---~~~~~~~~~~qi~~~l~~LH~-~~i~H~~l~p~nil~~~~~~~~l~d 149 (266)
T cd06651 78 ----EKTLTIFMEYMPGGSVKDQLKAYGAL---TESVTRKYTRQILEGMSYLHS-NMIVHRDIKGANILRDSAGNVKLGD 149 (266)
T ss_pred ----CCEEEEEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEECCCCCEEEcc
Confidence 24789999999 4799888765432 233455569999999999995 9999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hhc
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN 248 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~~ 248 (771)
||++............ .........|+|||++.+ ..++.++|+|||||++|++++|..||.... ...
T Consensus 150 fg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~ 220 (266)
T cd06651 150 FGASKRLQTICMSGTG---IRSVTGTPYWMSPEVISG------EGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFK 220 (266)
T ss_pred CCCccccccccccCCc---cccCCccccccCHHHhCC------CCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHH
Confidence 9998765431100000 011123447999999865 356678999999999999999998885322 110
Q ss_pred ------cC----CCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 249 ------TA----SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 249 ------~~----~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.. .+++.+..++ +|+..+|++||++.++++| +||+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h-p~~~ 265 (266)
T cd06651 221 IATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRH-PFAQ 265 (266)
T ss_pred HhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC-cccc
Confidence 11 2344455566 6777899999999999998 5654
No 143
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.97 E-value=1.3e-30 Score=278.88 Aligned_cols=237 Identities=18% Similarity=0.247 Sum_probs=192.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.||.|+ | .||.+.++.+++.|+||++...... ....+.+.+|++.++++.||||+++++++...
T Consensus 2 ~y~~~~~ig~g~~~--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 73 (290)
T cd05580 2 DFEFIKTLGTGSFG--RVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDD------ 73 (290)
T ss_pred ceEEEEEeecCCCe--EEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcC------
Confidence 599999999997 7 9999999999999999999754221 23456788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||+|.||+|+.+|.+||+|||+
T Consensus 74 --~~~~~v~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~qil~~l~~lH~-~~i~H~dl~p~nili~~~~~~kl~dfg~ 147 (290)
T cd05580 74 --SNLYLVMEYVPGGELFSHLRKSGR---FPEPVARFYAAQVVLALEYLHS-LDIVYRDLKPENLLLDSDGYIKITDFGF 147 (290)
T ss_pred --CeEEEEEecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEecCCCCHHHEEECCCCCEEEeeCCC
Confidence 4899999999 579998877543 2344566679999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h----
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R---- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~---- 247 (771)
+...... ......+..|++||.+.+ ...+.++|+||||+++|+|++|..|+..... .
T Consensus 148 ~~~~~~~---------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 212 (290)
T cd05580 148 AKRVKGR---------TYTLCGTPEYLAPEIILS------KGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE 212 (290)
T ss_pred ccccCCC---------CCCCCCCccccChhhhcC------CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence 8776442 111233457999998865 3456789999999999999999988754321 1
Q ss_pred ----ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 248 ----NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 248 ----~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+|+ ++.++++| +||+.
T Consensus 213 ~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~-~~~~~ 259 (290)
T cd05580 213 GKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH-PWFAG 259 (290)
T ss_pred CCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC-ccccc
Confidence 1134567788999999999999999 88999988 56654
No 144
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.97 E-value=1.4e-30 Score=277.09 Aligned_cols=240 Identities=20% Similarity=0.282 Sum_probs=190.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|. | .||+|+++.+++.|+||++..........+.+.+|++++++++||||+++++.+...
T Consensus 2 ~y~~~~~i~~g~~~--~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 72 (288)
T cd07833 2 KYEVLGVVGEGAYG--VVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRK------- 72 (288)
T ss_pred ceeEEEEecccCCe--eEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEEC-------
Confidence 599999999998 8 899999999999999999986554445567889999999999999999999999863
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..+|+||||+ +.+...+..... ......+.+++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 73 -~~~~iv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~ 148 (288)
T cd07833 73 -GRLYLVFEYVERTLLELLEASPG--GLPPDAVRSYIWQLLQAIAYCHS-HNIIHRDIKPENILVSESGVLKLCDFGFAR 148 (288)
T ss_pred -CEEEEEEecCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCCCEEEEeeeccc
Confidence 4899999999 444444333221 13455577889999999999996 899999999999999999999999999988
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----------- 246 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----------- 246 (771)
........ . .........|+|||+..+. ..++.++|+|||||++|+|++|.+++.....
T Consensus 149 ~~~~~~~~---~--~~~~~~~~~~~~PE~~~~~-----~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~ 218 (288)
T cd07833 149 ALRARPAS---P--LTDYVATRWYRAPELLVGD-----TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCL 218 (288)
T ss_pred ccCCCccc---c--ccCcccccCCcCCchhcCC-----CCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 76543210 1 1112334579999998763 2567899999999999999999987742110
Q ss_pred -----------------h----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 -----------------R----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 -----------------~----------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
. ....+|..+.+++++||..+|.+||++.++++|.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 287 (288)
T cd07833 219 GPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPY 287 (288)
T ss_pred CCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCC
Confidence 0 00123777899999999999999999999999854
No 145
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.97 E-value=6.9e-31 Score=279.47 Aligned_cols=238 Identities=20% Similarity=0.254 Sum_probs=188.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|. | .||+|.++.+++.|+||++..........+.+.+|++++++++||||++++++++.+
T Consensus 2 ~y~~~~~lg~g~~~--~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 72 (286)
T cd07846 2 KYENLGLVGEGSYG--MVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRK------- 72 (286)
T ss_pred ceeEeeeeccCCCe--EEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccC-------
Confidence 599999999998 8 999999998999999999876544444556788999999999999999999999763
Q ss_pred ccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+. .|..+...... .....+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 73 -~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH~-~~i~h~~l~p~ni~~~~~~~~~l~dfg~~ 147 (286)
T cd07846 73 -KRLYLVFEFVDHTVLDDLEKYPNG---LDESRVRKYLFQILRGIEFCHS-HNIIHRDIKPENILVSQSGVVKLCDFGFA 147 (286)
T ss_pred -CeEEEEEecCCccHHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEECCCCcEEEEeeeee
Confidence 48999999993 45555443221 2344566779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------- 246 (771)
......... .........|++||+..+. ..++.++|+|||||++|+|++|.+++.....
T Consensus 148 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~ 216 (286)
T cd07846 148 RTLAAPGEV------YTDYVATRWYRAPELLVGD-----TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKC 216 (286)
T ss_pred eeccCCccc------cCcccceeeccCcHHhccc-----cccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH
Confidence 766442211 1112334589999998653 2456789999999999999999887742210
Q ss_pred ---------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 ---------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 ---------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.....++..+.+++.+||+.+|.+||++.++++|.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~ 285 (286)
T cd07846 217 LGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285 (286)
T ss_pred hCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCC
Confidence 001245677889999999999999999999999844
No 146
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.97 E-value=2.2e-30 Score=274.83 Aligned_cols=237 Identities=17% Similarity=0.209 Sum_probs=184.7
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~~ 98 (771)
|++.+++|.|. | .||+|+++.+++.|+||++.......... ...+|+..++++. ||||+++++++++..
T Consensus 1 y~~~~~lg~g~~~--~v~~~~~~~~~~~~aik~~~~~~~~~~~~-~~~~e~~~l~~l~~h~~i~~~~~~~~~~~------ 71 (282)
T cd07831 1 YKILGKIGEGTFS--EVLKAQSRKTGKYYAIKCMKKHFKSLEQV-NNLREIQALRRLSPHPNILRLIEVLFDRK------ 71 (282)
T ss_pred CceEeeccccccc--eEEEEEEcCCCcEEEEEEehhccCCchhh-hHHHHHHHHhhcCCCCCccceEEEEecCC------
Confidence 78889999988 8 99999999999999999987643322222 3346888999886 999999999998643
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...+|+||||+ ++|.+.+..... ......+..++.||+.||.|||+ .+++||||+|+||+++. |.+||+|||++.
T Consensus 72 ~~~~~lv~e~~~~~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~LH~-~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~ 147 (282)
T cd07831 72 TGRLALVFELMDMNLYELIKGRKR--PLPEKRVKSYMYQLLKSLDHMHR-NGIFHRDIKPENILIKD-DILKLADFGSCR 147 (282)
T ss_pred CCcEEEEEecCCccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCceecccCHHHEEEcC-CCeEEEeccccc
Confidence 24899999999 678877766431 12344566779999999999996 89999999999999999 999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---------- 247 (771)
....... . ........|+|||+...+ ..++.++|+|||||++|||++|.+||...+..
T Consensus 148 ~~~~~~~-----~--~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~ 215 (282)
T cd07831 148 GIYSKPP-----Y--TEYISTRWYRAPECLLTD-----GYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVL 215 (282)
T ss_pred ccccCCC-----c--CCCCCCcccCChhHhhcC-----CCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHc
Confidence 6643211 0 112334579999976442 34567899999999999999998887532100
Q ss_pred -------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 -------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 -------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++.+||+.+|.+||++.++++|+|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~ 281 (282)
T cd07831 216 GTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPY 281 (282)
T ss_pred CCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCC
Confidence 01245778999999999999999999999999954
No 147
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.97 E-value=2.1e-30 Score=274.40 Aligned_cols=237 Identities=16% Similarity=0.227 Sum_probs=192.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|+ | .||+|+++.+++.|+||++..... ......+.+|+++++.++||||+++++.+..+
T Consensus 2 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 71 (274)
T cd06609 2 LFTLLECIGKGSFG--EVYKAIDKRTNQVVAIKVIDLEEA-EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG------- 71 (274)
T ss_pred hhhhhhhhcCCCCe--EEEEEEECCCCeEEEEEEeecccc-chHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC-------
Confidence 588999999987 7 999999999999999999986532 23455678999999999999999999998764
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+|+||+ ++|.+++.... .....+.+++.||+.||.|||+ .+++||||+|+||+++.+|.++|+|||++
T Consensus 72 -~~~~~v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 145 (274)
T cd06609 72 -SKLWIIMEYCGGGSCLDLLKPGK----LDETYIAFILREVLLGLEYLHE-EGKIHRDIKAANILLSEEGDVKLADFGVS 145 (274)
T ss_pred -CeEEEEEEeeCCCcHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCCCEEEcccccc
Confidence 4899999999 47988887652 2345577779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------c
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------N 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------~ 248 (771)
......... .........|++||++.+. .++.++|+|||||++|++++|..|+...... .
T Consensus 146 ~~~~~~~~~------~~~~~~~~~y~~PE~~~~~------~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~ 213 (274)
T cd06609 146 GQLTSTMSK------RNTFVGTPFWMAPEVIKQS------GYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN 213 (274)
T ss_pred eeecccccc------cccccCCccccChhhhccC------CCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc
Confidence 877542110 1112334479999998763 4678999999999999999999887532110 0
Q ss_pred -----cC-CCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 249 -----TA-SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 249 -----~~-~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.. .+|..+.+++.+||..+|.+||++.++++|+ ||.
T Consensus 214 ~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~-~~~ 255 (274)
T cd06609 214 NPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHK-FIK 255 (274)
T ss_pred CCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhCh-hhc
Confidence 01 2677899999999999999999999999984 443
No 148
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=9.2e-31 Score=292.94 Aligned_cols=239 Identities=15% Similarity=0.213 Sum_probs=186.4
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
...|++.+.||.|+ | +||.+..+. ++..|+||.+... ....+|+++|++|+||||+++++.+..+
T Consensus 91 ~~~y~i~~~Lg~G~~g--~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~~--- 158 (392)
T PHA03207 91 RMQYNILSSLTPGSEG--EVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRWK--- 158 (392)
T ss_pred cCceEEEEeecCCCCe--EEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEeeC---
Confidence 45699999999998 8 999998653 4578999987642 1345799999999999999999999864
Q ss_pred cCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+|||++ ++|.+++..... .....+..++.||+.||.|||+ .+|+||||||+||+++.+|.+||+||
T Consensus 159 -----~~~~lv~e~~~~~l~~~l~~~~~---l~~~~~~~i~~ql~~aL~~LH~-~givHrDlkp~Nill~~~~~~~l~Df 229 (392)
T PHA03207 159 -----STVCMVMPKYKCDLFTYVDRSGP---LPLEQAITIQRRLLEALAYLHG-RGIIHRDVKTENIFLDEPENAVLGDF 229 (392)
T ss_pred -----CEEEEEehhcCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEEcCCCCEEEccC
Confidence 3899999999 578888854332 2344466779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++........ ....+.+.++..|+|||++.+ ..++.++|+|||||++|||++|..||.....
T Consensus 230 G~a~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l 299 (392)
T PHA03207 230 GAACKLDAHPD----TPQCYGWSGTLETNSPELLAL------DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQL 299 (392)
T ss_pred ccccccCcccc----cccccccccccCccCHhHhcC------CCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHH
Confidence 99976654211 111223455668999999876 3567899999999999999999877643210
Q ss_pred hc------------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 247 RN------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 247 ~~------------------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
.. ...++..+.+++.+||..+|.+||++.++|.| +||
T Consensus 300 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~-p~f 378 (392)
T PHA03207 300 RSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL-PLF 378 (392)
T ss_pred HHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC-chh
Confidence 00 01234567778999999999999999999999 566
Q ss_pred cchh
Q 004157 285 QNKL 288 (771)
Q Consensus 285 ~n~l 288 (771)
...-
T Consensus 379 ~~~~ 382 (392)
T PHA03207 379 TKEP 382 (392)
T ss_pred hccc
Confidence 5433
No 149
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.97 E-value=1.9e-30 Score=273.22 Aligned_cols=242 Identities=17% Similarity=0.278 Sum_probs=190.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc----hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ----DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~----~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
+|++++.||.|. | .||.|..+.+++.|+||++...... ......+++|++.|++++||||+++++.+...
T Consensus 1 ~~~~~~~lg~g~~~--~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--- 75 (268)
T cd06630 1 EWLKGQQLGTGAFS--SCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCED--- 75 (268)
T ss_pred CccccceecCcCce--EEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccC---
Confidence 489999999998 8 9999999999999999999754321 23467889999999999999999999999763
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-cEEEE
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLH 171 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G-~~KL~ 171 (771)
..+|+|+||+ ++|.+++++... .....+..++.||+.||.|||+ .+++|+||+|+||+++.+| .+||+
T Consensus 76 -----~~~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~ql~~al~~LH~-~~i~H~~i~~~nil~~~~~~~~~l~ 146 (268)
T cd06630 76 -----SHFNLFVEWMAGGSVSHLLSKYGA---FKEAVIINYTEQLLRGLSYLHE-NQIIHRDVKGANLLIDSTGQRLRIA 146 (268)
T ss_pred -----CeEEEEEeccCCCcHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEEc
Confidence 4899999999 479998876542 2234456669999999999996 8999999999999998876 59999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc---
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN--- 248 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~--- 248 (771)
|||++........... ........+..|+|||++.+ ..++.++|+|+|||++|++++|..|+.......
T Consensus 147 dfg~~~~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~------~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~ 218 (268)
T cd06630 147 DFGAAARLAAKGTGAG--EFQGQLLGTIAFMAPEVLRG------EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA 218 (268)
T ss_pred ccccccccccccccCC--ccccccccccceeCHhHhcc------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH
Confidence 9999877654311110 01111233458999999865 356678999999999999999998875332110
Q ss_pred ----------c----CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 249 ----------T----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 249 ----------~----~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
. ..++..+.+++.+||..+|..||++.++++| +||
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~-~~~ 267 (268)
T cd06630 219 LIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH-PVF 267 (268)
T ss_pred HHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC-ccc
Confidence 1 1345678889999999999999999999998 454
No 150
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.97 E-value=2.5e-30 Score=270.07 Aligned_cols=237 Identities=21% Similarity=0.230 Sum_probs=190.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|. | .||.+.++.+++.|+||.+............+.+|+++|++++||||+++++.+..+
T Consensus 1 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------- 71 (256)
T cd08220 1 KYEKIRVVGRGAFG--IVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLED------- 71 (256)
T ss_pred CceEEEEecccCce--EEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecC-------
Confidence 589999999997 7 999999999999999999987654555567889999999999999999999998753
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-cEEEEccCc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHAFDV 175 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G-~~KL~dFgl 175 (771)
..+|+||||+ ++|.+++....... .....+..++.|++.+|.|||+ ++++||||+|+||+++.++ ..||+|||+
T Consensus 72 -~~~~lv~e~~~~~~L~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~~~~l~d~~~ 148 (256)
T cd08220 72 -KALMIVMEYAPGGTLAEYIQKRCNSL-LDEDTILHFFVQILLALHHVHT-KLILHRDLKTQNILLDKHKMVVKIGDFGI 148 (256)
T ss_pred -CEEEEEEecCCCCCHHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEEccCCC
Confidence 4899999999 47999987653211 2334456669999999999996 9999999999999998655 579999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+........ .........|+|||.+.+ ..++.++|+||||+++|+|++|..++...+..
T Consensus 149 ~~~~~~~~~-------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~ 215 (256)
T cd08220 149 SKILSSKSK-------AYTVVGTPCYISPELCEG------KPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMS 215 (256)
T ss_pred ceecCCCcc-------ccccccCCcccCchhccC------CCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHh
Confidence 987644211 111233458999999875 34667899999999999999998887543211
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
....++..+.+++.+||..+|.+||++.++++|+
T Consensus 216 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p 254 (256)
T cd08220 216 GTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQP 254 (256)
T ss_pred cCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCC
Confidence 1134667799999999999999999999999984
No 151
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.97 E-value=4e-30 Score=275.26 Aligned_cols=247 Identities=16% Similarity=0.200 Sum_probs=191.2
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+...|++.+++|.|+ | .||+|.++.++..|++|++.... ....+.+.+|+++++.++||||+++++.+..+
T Consensus 10 ~~~~y~i~~~lg~g~~g--~vy~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 81 (292)
T cd06644 10 PNEVWEIIGELGDGAFG--KVYKAKNKETGALAAAKVIETKS--EEELEDYMVEIEILATCNHPYIVKLLGAFYWD---- 81 (292)
T ss_pred cchhhhhhheecCCCCe--EEEEEEECCCCceEEEEEeccCC--HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC----
Confidence 456799999999998 7 99999999999999999997542 33466788899999999999999999998864
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ +.|..++.+... ......+..++.||+.+|.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 82 ----~~~~lv~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~kl~df 154 (292)
T cd06644 82 ----GKLWIMIEFCPGGAVDAIMLELDR--GLTEPQIQVICRQMLEALQYLHS-MKIIHRDLKAGNVLLTLDGDIKLADF 154 (292)
T ss_pred ----CeEEEEEecCCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhc-CCeeecCCCcceEEEcCCCCEEEccC
Confidence 3899999999 457776654322 12334566679999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++........ ..........|+|||++.+.... ...++.++|+|||||++|+|++|.+|+.....
T Consensus 155 g~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~ 227 (292)
T cd06644 155 GVSAKNVKTLQ------RRDSFIGTPYWMAPEVVMCETMK-DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI 227 (292)
T ss_pred ccceecccccc------ccceecCCccccCceeecccccc-CCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHH
Confidence 99865432110 01122334589999998532100 12356789999999999999999988754221
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....++..+.+++.+||+.+|.+||++.++++| +||.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~-~~~~~ 274 (292)
T cd06644 228 AKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH-PFVSS 274 (292)
T ss_pred hcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC-ccccc
Confidence 0112345678899999999999999999999998 55543
No 152
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.97 E-value=2.5e-30 Score=270.12 Aligned_cols=236 Identities=17% Similarity=0.202 Sum_probs=190.3
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|++.+.++.|. | .||+|+.+.++..|++|.+.... ..+.+.+|++.+++++||||+++++.+...
T Consensus 2 ~~~y~~~~~i~~g~~~--~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~----- 70 (256)
T cd06612 2 EEVFDILEKLGEGSYG--SVYKAIHKETGQVVAIKVVPVEE----DLQEIIKEISILKQCDSPYIVKYYGSYFKN----- 70 (256)
T ss_pred cccchhhhhhcCCCCe--EEEEEEEcCCCcEEEEEEeecHH----HHHHHHHHHHHHHhCCCCcEeeeeeeeecC-----
Confidence 45799999999997 7 99999999889999999997532 256789999999999999999999999864
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+++|++ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 71 ---~~~~l~~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~~l~~lh~-~~i~H~dl~~~ni~~~~~~~~~l~dfg 144 (256)
T cd06612 71 ---TDLWIVMEYCGAGSVSDIMKITNK--TLTEEEIAAILYQTLKGLEYLHS-NKKIHRDIKAGNILLNEEGQAKLADFG 144 (256)
T ss_pred ---CcEEEEEecCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcceEEECCCCcEEEcccc
Confidence 4899999999 479888865432 12344566779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------- 246 (771)
++......... .........|+|||++.+ ..++.++|+|||||++|+|++|..|+.....
T Consensus 145 ~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~------~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~ 212 (256)
T cd06612 145 VSGQLTDTMAK------RNTVIGTPFWMAPEVIQE------IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIP 212 (256)
T ss_pred cchhcccCccc------cccccCCccccCHHHHhc------CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhc
Confidence 98876542210 111123447999999865 3566789999999999999999988753211
Q ss_pred -------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 -------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 -------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.....++..+.+++.+|++.+|.+||++.+++.|.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~ 255 (256)
T cd06612 213 NKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPF 255 (256)
T ss_pred cCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCC
Confidence 011235567899999999999999999999999843
No 153
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.5e-30 Score=295.73 Aligned_cols=238 Identities=18% Similarity=0.174 Sum_probs=184.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
..+.|.+.+.||.|+ | .||+|+++.+++.|+||.... ....+|+++|++|+||||+++++++...
T Consensus 167 ~~~gy~i~~~Lg~G~~G--~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~HpnIv~l~~~~~~~---- 232 (461)
T PHA03211 167 AGLGFAIHRALTPGSEG--CVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSHPAVLALLDVRVVG---- 232 (461)
T ss_pred ccCCeEEEEEEccCCCe--EEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCCCCCCcEEEEEEEC----
Confidence 356799999999998 8 999999999999999996432 2356899999999999999999998763
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...|+|||++ +.|..++..... ......+..++.||+.||.|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 233 ----~~~~lv~e~~~~~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~yLH~-~gIvHrDLKP~NILl~~~~~vkL~DFG 305 (461)
T PHA03211 233 ----GLTCLVLPKYRSDLYTYLGARLR--PLGLAQVTAVARQLLSAIDYIHG-EGIIHRDIKTENVLVNGPEDICLGDFG 305 (461)
T ss_pred ----CEEEEEEEccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEEECcCCHHHEEECCCCCEEEcccC
Confidence 3789999999 678888765432 12344566779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCC-CCChh---------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR-LSKTE--------- 244 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~-p~~~~--------- 244 (771)
+++........ .......++..|++||++.+ ..++.++|+|||||++|||++|.. +|...
T Consensus 306 la~~~~~~~~~----~~~~~~~GT~~Y~APE~~~~------~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~ 375 (461)
T PHA03211 306 AACFARGSWST----PFHYGIAGTVDTNAPEVLAG------DPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYD 375 (461)
T ss_pred Cceeccccccc----ccccccCCCcCCcCHHHHcC------CCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcH
Confidence 99765432110 11122234558999999876 356789999999999999988653 22110
Q ss_pred -hh----hc---------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 245 -EL----RN---------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 245 -~l----~~---------------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
++ .. ...++..+.+++++||+.||.+||++.++|+|
T Consensus 376 ~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 376 AQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 00 01233467889999999999999999999999
Q ss_pred CCCCcc
Q 004157 281 SEYFQN 286 (771)
Q Consensus 281 ~~fF~n 286 (771)
.||++
T Consensus 456 -p~f~~ 460 (461)
T PHA03211 456 -PLFQS 460 (461)
T ss_pred -cccCC
Confidence 66654
No 154
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.97 E-value=9.7e-31 Score=284.18 Aligned_cols=235 Identities=15% Similarity=0.193 Sum_probs=181.0
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhc-CCCCCeeEEeeeEEecccCcCCcccE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRT-VRHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~-LrHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
+.||.|+ | +||+|+++.+++.|+||++..... .+........|...++. ++||||+++++++++. ..
T Consensus 1 ~~lG~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~--------~~ 70 (316)
T cd05619 1 KMLGKGSFG--KVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTK--------EN 70 (316)
T ss_pred CeeeeCCCE--EEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeC--------CE
Confidence 3578887 8 999999999999999999986421 11233455667777775 5899999999999863 48
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+||||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~ey~~~g~L~~~l~~~~~~---~~~~~~~~~~qi~~al~~LH~-~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05619 71 LFFVMEYLNGGDLMFHIQSCHKF---DLPRATFYAAEIICGLQFLHS-KGIVYRDLKLDNILLDTDGHIKIADFGMCKEN 146 (316)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHh-CCeEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence 99999999 5799888765322 233355669999999999996 89999999999999999999999999998754
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc-----------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN----------- 248 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~----------- 248 (771)
..... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||.......
T Consensus 147 ~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~ 214 (316)
T cd05619 147 MLGDA------KTCTFCGTPDYIAPEILLG------QKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPC 214 (316)
T ss_pred CCCCC------ceeeecCCccccCHHHHcC------CCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence 22111 0112234558999999876 356789999999999999999999885432111
Q ss_pred -cCCCCcchHHHHHHHhccCCCCCCChH-HHhhCCCCCcc
Q 004157 249 -TASIPKSLLPDYQRLLSSMPSRRLNSS-KLIENSEYFQN 286 (771)
Q Consensus 249 -~~~IP~~l~~~i~~lL~~~P~~Rps~~-~lL~~~~fF~n 286 (771)
...++..+.+++.+||..+|.+|+++. ++++| +||..
T Consensus 215 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h-~~~~~ 253 (316)
T cd05619 215 YPRWLTREAKDILVKLFVREPERRLGVKGDIRQH-PFFRE 253 (316)
T ss_pred CCccCCHHHHHHHHHHhccCHhhcCCChHHHHcC-cccCC
Confidence 123556788999999999999999996 67666 67755
No 155
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=1.6e-30 Score=279.74 Aligned_cols=255 Identities=19% Similarity=0.321 Sum_probs=191.7
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++.+.||.|+ | .||+|+++.+++.|+||++......+.....+.+|++.++.++||||+++++.+.......+
T Consensus 7 ~~~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 7 LRDYEILGKLGEGTFG--EVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred cccEEEEEEeccCCCE--EEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccc
Confidence 45799999999998 7 99999999999999999998654444334467789999999999999999998865432211
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.....+|+|+||+ ..|...+..... ......+..++.||++||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 85 ~~~~~~~lv~~~~~~~l~~~~~~~~~--~~~~~~~~~i~~~l~~al~~lH~-~~i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 85 RKRGSVYMVTPYMDHDLSGLLENPSV--KLTESQIKCYMLQLLEGINYLHE-NHILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred ccCceEEEEEecCCcCHHHHHhcccc--CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCCEEECcCcc
Confidence 2245789999999 457666654321 23455577789999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCC----Cccc-cccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---
Q 004157 176 LSEFDGNNEAANG----PMLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~----~~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--- 247 (771)
+............ .... ........|+|||++.+. ..++.++|+|||||++|+|++|.++|......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~ 236 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGE-----RRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQL 236 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCC-----CccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 9765432211110 0001 111223479999987653 34667899999999999999999887432100
Q ss_pred ---------------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 ---------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ---------------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....+...+.+++.+||+.+|.+||++.+++.|++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~ 310 (311)
T cd07866 237 HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPY 310 (311)
T ss_pred HHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCC
Confidence 00123356778999999999999999999999843
No 156
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.97 E-value=1.5e-30 Score=286.91 Aligned_cols=241 Identities=18% Similarity=0.231 Sum_probs=189.0
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.-+|++.+.||.|+ | +||.|+++.+|+.|+||++.+..........+.+|++++++++||||+++++++......
T Consensus 15 ~~~y~~~~~lg~g~~g--~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-- 90 (353)
T cd07850 15 LKRYQNLKPIGSGAQG--IVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSL-- 90 (353)
T ss_pred hcceEEEEEeccCCCE--EEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCc--
Confidence 34699999999998 8 999999999999999999876544444456677899999999999999999998643210
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
......|+||||+ ++|.+.+... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 91 ~~~~~~~lv~e~~~~~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH~-~gi~H~dlkp~Nil~~~~~~~kL~Dfg~ 164 (353)
T cd07850 91 EEFQDVYLVMELMDANLCQVIQMD-----LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTLKILDFGL 164 (353)
T ss_pred cccCcEEEEEeccCCCHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEECCCCCEEEccCcc
Confidence 0123689999999 5687777643 2234466779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+....... .......+..|+|||++.+ ..++.++|+|||||++|+|++|..+|...+..
T Consensus 165 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~ 231 (353)
T cd07850 165 ARTAGTSF-------MMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIE 231 (353)
T ss_pred ceeCCCCC-------CCCCCcccccccCHHHHhC------CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence 97654321 1112234457999999875 35678999999999999999998877422100
Q ss_pred ---------------------------------c--------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ---------------------------------N--------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ---------------------------------~--------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. ....+..+.+++.+||..+|.+||++.++|.|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 232 QLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred hcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 00124457889999999999999999999998
Q ss_pred C
Q 004157 281 S 281 (771)
Q Consensus 281 ~ 281 (771)
+
T Consensus 312 ~ 312 (353)
T cd07850 312 P 312 (353)
T ss_pred h
Confidence 4
No 157
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.97 E-value=2.8e-31 Score=287.52 Aligned_cols=226 Identities=17% Similarity=0.272 Sum_probs=184.3
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
=+|+|. | .||.|+.+ ++.||||++. ++-..+|+-|++|+|||||.|.+++... ..+||
T Consensus 131 WlGSGaQG--AVF~Grl~--netVAVKKV~---------elkETdIKHLRkLkH~NII~FkGVCtqs--------PcyCI 189 (904)
T KOG4721|consen 131 WLGSGAQG--AVFLGRLH--NETVAVKKVR---------ELKETDIKHLRKLKHPNIITFKGVCTQS--------PCYCI 189 (904)
T ss_pred hhccCccc--ceeeeecc--CceehhHHHh---------hhhhhhHHHHHhccCcceeeEeeeecCC--------ceeEE
Confidence 468888 9 89999876 8999999865 2234579999999999999999999763 48999
Q ss_pred EecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCC
Q 004157 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (771)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~ 182 (771)
||||| +.|+++|+..... .....+.| ..+|+.|+.|||. .+|||||||.-||+|+.+..+||+|||-++...+.
T Consensus 190 iMEfCa~GqL~~VLka~~~i--tp~llv~W-sk~IA~GM~YLH~-hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ 265 (904)
T KOG4721|consen 190 IMEFCAQGQLYEVLKAGRPI--TPSLLVDW-SKGIAGGMNYLHL-HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK 265 (904)
T ss_pred eeeccccccHHHHHhccCcc--CHHHHHHH-HHHhhhhhHHHHH-hhHhhhccCCCceEeeccceEEeccccchHhhhhh
Confidence 99999 7899999986532 12233334 8899999999996 89999999999999999999999999999877652
Q ss_pred CCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------------hc
Q 004157 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------------RN 248 (771)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------------~~ 248 (771)
. ....+.++..|||||++++ .....++||||||+++|||++|..|+..-+- ..
T Consensus 266 S-------TkMSFaGTVaWMAPEvIrn------ePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~Lpv 332 (904)
T KOG4721|consen 266 S-------TKMSFAGTVAWMAPEVIRN------EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPV 332 (904)
T ss_pred h-------hhhhhhhhHhhhCHHHhhc------CCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccC
Confidence 1 1233455669999999987 4677899999999999999999988754321 12
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhh
Q 004157 249 TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLV 289 (771)
Q Consensus 249 ~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv 289 (771)
....|+.+.=++++|++..|..||++.+++.|..+|.-.+.
T Consensus 333 PstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pell 373 (904)
T KOG4721|consen 333 PSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPELL 373 (904)
T ss_pred cccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHHh
Confidence 24678888889999999999999999999999777765443
No 158
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.97 E-value=2e-30 Score=278.33 Aligned_cols=250 Identities=19% Similarity=0.276 Sum_probs=191.7
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc--C
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI--D 94 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~--d 94 (771)
...|++.+.+|.|. | +||+|+++.+|+.|+||++......+.....+.+|++.+++++||||+++++++..... +
T Consensus 6 ~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 6 VDKFDIIGQIGEGTYG--QVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhheeeeecccCCE--EEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35699999999997 7 99999999999999999998654444445567889999999999999999999875320 0
Q ss_pred cCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.......+|+|+||+ +.|...+.... .......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 84 ~~~~~~~~~lv~e~~~~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~-~~i~H~dl~p~nili~~~~~~kl~df 160 (302)
T cd07864 84 FKKDKGAFYLVFEYMDHDLMGLLESGL--VHFSEDHIKSFMKQLLEGLNYCHK-KNFLHRDIKCSNILLNNKGQIKLADF 160 (302)
T ss_pred ccccCCcEEEEEcccCccHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCCcEEeCcc
Confidence 000123799999999 45766665432 123344566779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++......... + .........|++||.+.+. ...+.++|+|||||++|+|++|.++|.....
T Consensus 161 g~~~~~~~~~~~---~--~~~~~~~~~y~~PE~~~~~-----~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~ 230 (302)
T cd07864 161 GLARLYNSEESR---P--YTNKVITLWYRPPELLLGE-----ERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELI 230 (302)
T ss_pred cccccccCCccc---c--cccceeccCccChHHhcCC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 999866542210 0 0111234479999987542 2356789999999999999999987753210
Q ss_pred -----------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 -----------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 -----------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.....+|..+.+++.+||+.+|.+||++.+++.|.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~ 301 (302)
T cd07864 231 SRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPW 301 (302)
T ss_pred HHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 011246888999999999999999999999999843
No 159
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=1.8e-30 Score=279.12 Aligned_cols=238 Identities=17% Similarity=0.243 Sum_probs=191.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|. | .||+|+++.+|+.|+||.+...... ..+.+.+|+..++.++||||+++++.++..
T Consensus 17 ~~~~y~~~~~lg~g~~g--~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---- 88 (297)
T cd06656 17 PKKKYTRFEKIGQGASG--TVYTAIDIATGQEVAIKQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVG---- 88 (297)
T ss_pred hhhhceeeeeeccCCCe--EEEEEEECCCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecC----
Confidence 457899999999998 8 8999999999999999999764333 345678999999999999999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.++|+||||+ ++|.+++.+... ....+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 89 ----~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~l~~~L~~LH~-~~i~H~dL~p~Nili~~~~~~~l~Df 159 (297)
T cd06656 89 ----DELWVVMEYLAGGSLTDVVTETCM----DEGQIAAVCRECLQALDFLHS-NQVIHRDIKSDNILLGMDGSVKLTDF 159 (297)
T ss_pred ----CEEEEeecccCCCCHHHHHHhCCC----CHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEECcC
Confidence 4899999999 478888876432 234456679999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-h-----
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-R----- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-~----- 247 (771)
|++......... .........|++||...+ ..++.++|+|||||++|++++|..||...+. .
T Consensus 160 g~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~ 227 (297)
T cd06656 160 GFCAQITPEQSK------RSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 227 (297)
T ss_pred ccceEccCCccC------cCcccCCccccCHHHHcC------CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee
Confidence 998765432110 111223447999999875 3566789999999999999999988754321 0
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
....++..+.+++.+||..+|.+||++.++++|+ ||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~-~~ 272 (297)
T cd06656 228 ATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHP-FL 272 (297)
T ss_pred ccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCc-hh
Confidence 1134566788999999999999999999999984 44
No 160
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.97 E-value=1.4e-30 Score=285.09 Aligned_cols=247 Identities=20% Similarity=0.310 Sum_probs=190.8
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|+ | .||.|+++.+|+.|+||++..... ......+.+|+.+++.++||||+++++++......
T Consensus 5 ~~y~i~~~lg~G~~g--~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--- 78 (336)
T cd07849 5 PRYQNLSYIGEGAYG--MVCSATHKPTGVKVAIKKISPFEH-QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFE--- 78 (336)
T ss_pred cceEEEEEEEecCCe--EEEEEEEcCCCCeEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCcCchhheeeccccc---
Confidence 4699999999998 8 999999999999999999864322 23455677899999999999999999987653311
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+|+|+||+ ++|.+.+....+ ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++
T Consensus 79 ~~~~~~lv~e~~~~~l~~~~~~~~l----~~~~~~~i~~ql~~aL~~LH~-~~ivH~dlkp~Nill~~~~~~kl~dfg~~ 153 (336)
T cd07849 79 SFNDVYIVQELMETDLYKLIKTQHL----SNDHIQYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTNCDLKICDFGLA 153 (336)
T ss_pred ccceEEEEehhcccCHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEECCCCCEEECcccce
Confidence 134789999999 567777765432 344567779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------- 246 (771)
........... ......++..|+|||.+.+. ..++.++|+|||||++|+|++|.++|...+.
T Consensus 154 ~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-----~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~ 225 (336)
T cd07849 154 RIADPEHDHTG---FLTEYVATRWYRAPEIMLNS-----KGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGV 225 (336)
T ss_pred eeccccccccC---CcCCcCcCCCccChHHhhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 76543211110 01122345579999986542 3466789999999999999999988743210
Q ss_pred ---------h------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 ---------R------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 ---------~------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
. ....++..+.+++.+||+.+|.+||++.++++| +||.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h-p~~~ 296 (336)
T cd07849 226 LGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH-PYLE 296 (336)
T ss_pred cCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC-cccc
Confidence 0 012346678899999999999999999999999 4554
No 161
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.97 E-value=1.4e-30 Score=284.24 Aligned_cols=235 Identities=15% Similarity=0.212 Sum_probs=184.4
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
.||.|+ | +||+|.++.+++.|+||++.+.... +.....+.+|+.+++++ +||||++++++++.. ..+
T Consensus 2 ~lG~G~~g--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--------~~~ 71 (327)
T cd05617 2 VIGRGSYA--KVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTT--------SRL 71 (327)
T ss_pred eeeeCCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeC--------CEE
Confidence 578887 7 9999999999999999999864322 23456788899999888 599999999999863 489
Q ss_pred EEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++....
T Consensus 72 ~lv~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~qi~~al~~lH~-~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~ 147 (327)
T cd05617 72 FLVIEYVNGGDLMFHMQRQRK---LPEEHARFYAAEICIALNFLHE-RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGL 147 (327)
T ss_pred EEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEEeCCCCEEEeccccceecc
Confidence 9999999 478888876432 2344566679999999999996 899999999999999999999999999987532
Q ss_pred CCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----------h----
Q 004157 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----------L---- 246 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----------l---- 246 (771)
.... ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||.... +
T Consensus 148 ~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 215 (327)
T cd05617 148 GPGD------TTSTFCGTPNYIAPEILRG------EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVI 215 (327)
T ss_pred CCCC------ceecccCCcccCCHHHHCC------CCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHH
Confidence 2111 0112344568999999876 356789999999999999999999884210 0
Q ss_pred -----hccCCCCcchHHHHHHHhccCCCCCCCh------HHHhhCCCCCcch
Q 004157 247 -----RNTASIPKSLLPDYQRLLSSMPSRRLNS------SKLIENSEYFQNK 287 (771)
Q Consensus 247 -----~~~~~IP~~l~~~i~~lL~~~P~~Rps~------~~lL~~~~fF~n~ 287 (771)
.....++..+.+++.+||+.+|.+|+++ .++++| +||+..
T Consensus 216 ~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h-~~f~~~ 266 (327)
T cd05617 216 LEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH-TFFRSI 266 (327)
T ss_pred HhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC-CCCCCC
Confidence 0112355678899999999999999984 588877 777653
No 162
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=2.2e-30 Score=278.43 Aligned_cols=238 Identities=16% Similarity=0.221 Sum_probs=191.1
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+..+|++.+.+|.|. | .||+|+++.++..|+||.+...... ..+.+.+|+.+++.++||||+++++.+...
T Consensus 18 ~~~~y~~~~~lg~g~~~--~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~---- 89 (296)
T cd06654 18 PKKKYTRFEKIGQGASG--TVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVG---- 89 (296)
T ss_pred cccceeeEEEecCCCCe--EEEEEEECCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCCCCCEeeEEEEEEeC----
Confidence 457899999999998 8 8999999999999999999865433 245688999999999999999999998863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.+.|+||||+ ++|.+++.+... ....+..++.|++.||.|||+ .+++||||||+||+++.+|.+||+||
T Consensus 90 ----~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~i~~ql~~aL~~LH~-~gi~H~dLkp~Nill~~~~~~kl~df 160 (296)
T cd06654 90 ----DELWVVMEYLAGGSLTDVVTETCM----DEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDF 160 (296)
T ss_pred ----CEEEEeecccCCCCHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEcCCCCEEECcc
Confidence 4899999999 479888875432 233355669999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++......... .........|+|||.+.+ ..++.++|+|||||++|+|++|..||.....
T Consensus 161 g~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~ 228 (296)
T cd06654 161 GFCAQITPEQSK------RSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228 (296)
T ss_pred ccchhccccccc------cCcccCCccccCHHHHcC------CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHH
Confidence 998765432110 011123458999999865 3456799999999999999999988754321
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
.....++..+.+++.+||..+|..||++.++++|.++
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~ 273 (296)
T cd06654 229 ATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFL 273 (296)
T ss_pred hcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhh
Confidence 0113456678899999999999999999999998433
No 163
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.97 E-value=2.1e-30 Score=279.18 Aligned_cols=241 Identities=15% Similarity=0.131 Sum_probs=182.4
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECC----------------CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD----------------DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP 79 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~----------------~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHP 79 (771)
+..+|.+.++||.|+ | .||+|.++. ++..|+||++.... .......+.+|+++|++++||
T Consensus 3 ~~~~~~~~~~lg~G~fg--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~ 79 (304)
T cd05096 3 PRGHLLFKEKLGEGQFG--EVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDP 79 (304)
T ss_pred chhhCeeeeEecccCCe--EEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCC
Confidence 456799999999998 8 999997542 34479999987543 233456788999999999999
Q ss_pred CeeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCC----------------CcHHHHHHHHHHHHHHH
Q 004157 80 NILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGS----------------QRDEYYAWGLNQIAKAV 141 (771)
Q Consensus 80 nIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~----------------~~~~~i~~gl~QI~~aL 141 (771)
||+++++++..+ ...|+||||+ ++|.+++........ .....+..++.||+.||
T Consensus 80 niv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al 151 (304)
T cd05096 80 NIIRLLGVCVDE--------DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGM 151 (304)
T ss_pred CeeEEEEEEecC--------CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999864 3789999999 579998876432111 12233556799999999
Q ss_pred HHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCc
Q 004157 142 SFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWS 221 (771)
Q Consensus 142 ~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~ 221 (771)
.|||+ .+++||||||+||+++.+|.+||+|||+++........ ........+..|+|||++.+ ..++.+
T Consensus 152 ~~lH~-~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~ 220 (304)
T cd05096 152 KYLSS-LNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYY----RIQGRAVLPIRWMAWECILM------GKFTTA 220 (304)
T ss_pred HHHHH-CCccccCcchhheEEcCCccEEECCCccceecccCcee----EecCcCCCCccccCHHHHhc------CCCCch
Confidence 99996 89999999999999999999999999999765432110 00011122447999999865 356779
Q ss_pred chHHHHHHHHHHHhhC--CCCCChh---hh--------h---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 222 IDSWGLGCLIYELFSG--MRLSKTE---EL--------R---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 222 ~Di~SLG~li~el~~g--~~p~~~~---~l--------~---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
+|+|||||++|||+++ ..|+... +. . ....+|..+.+++.+|++.+|.+||++.++.+
T Consensus 221 ~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 221 SDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred hhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 9999999999999864 3444321 10 0 11245778999999999999999999999854
No 164
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=7.6e-31 Score=289.85 Aligned_cols=239 Identities=20% Similarity=0.254 Sum_probs=203.0
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|.+.+.||.|. + +|..|++..++..||||++++...+...+..+.+|+++++.|.||||++++.+++.+
T Consensus 56 g~y~i~~tig~g~f~--~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~------ 127 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFA--KVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETE------ 127 (596)
T ss_pred cceeeeeeeccceeE--EEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeec------
Confidence 3589999999998 8 999999999999999999999877776666688999999999999999999999985
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ +.+.++|.+.+...+... .-.+.|++.|++|||. .+|||||||.+||+++.+-++||+|||+
T Consensus 128 --~~lylV~eya~~ge~~~yl~~~gr~~e~~a---r~~F~q~vsaveYcH~-k~ivHrdLk~eNilL~~~mnikIaDfgf 201 (596)
T KOG0586|consen 128 --ATLYLVMEYASGGELFDYLVKHGRMKEKEA---RAKFRQIVSAVEYCHS-KNIVHRDLKAENILLDENMNIKIADFGF 201 (596)
T ss_pred --ceeEEEEEeccCchhHHHHHhcccchhhhh---hhhhHHHHHHHHHHhh-cceeccccchhhcccccccceeeecccc
Confidence 4899999999 679999998875444322 3338999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT------ 249 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~------ 249 (771)
+..+.... + -..+++...|.|||+..+. +..+..+|+|+||+++|.|+.|.-||+...++.+
T Consensus 202 S~~~~~~~------~-lqt~cgsppyAaPEl~~g~-----~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~ 269 (596)
T KOG0586|consen 202 STFFDYGL------M-LQTFCGSPPYAAPELFNGK-----KYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR 269 (596)
T ss_pred ceeecccc------c-ccccCCCCCccChHhhcCc-----ccCCcceehhhhhhhheeeeecccccCCcccccccchhee
Confidence 98886421 1 2245667799999999874 4567899999999999999999999987766543
Q ss_pred --CCC----CcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 250 --ASI----PKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 250 --~~I----P~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
..| ..+..++++++|-.+|.+|++.++++.|.|.
T Consensus 270 gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~ 309 (596)
T KOG0586|consen 270 GKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWR 309 (596)
T ss_pred eeecccceeechhHHHHHHhhccCccccCCHHHhhhhccc
Confidence 234 4567788899999999999999999998543
No 165
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.97 E-value=1e-30 Score=274.13 Aligned_cols=236 Identities=15% Similarity=0.223 Sum_probs=192.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.+|.|+ | .||.|.++.+++.|+||++.+..... .....+.+|++++++++||||+++++.++..
T Consensus 1 ~y~~~~~i~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 72 (258)
T cd05578 1 HFELLRVIGKGAFG--KVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDE------ 72 (258)
T ss_pred CceEEEEeccCCCc--eEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCC------
Confidence 489999999998 8 99999999999999999998654332 4567889999999999999999999998753
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+|+||+ ++|.+++..... .....+..++.||++||.|||+ .+++|+||+|+||+++.+|.++|+|||+
T Consensus 73 --~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~~i~~~l~~lh~-~~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 73 --ENMYLVVDLLLGGDLRYHLSQKVK---FSEEQVKFWICEIVLALEYLHS-KGIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred --CeEEEEEeCCCCCCHHHHHHhcCC---cCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 4899999999 579999877622 2244466679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------- 246 (771)
+........ .........|+|||+..+ ..++.++|+|||||++|++++|..|+.....
T Consensus 147 ~~~~~~~~~-------~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~ 213 (258)
T cd05578 147 ATKVTPDTL-------TTSTSGTPGYMAPEVLCR------QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAK 213 (258)
T ss_pred ccccCCCcc-------ccccCCChhhcCHHHHcc------cCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHH
Confidence 876643211 111223447999999876 3467899999999999999999988754321
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCCh--HHHhhCCC
Q 004157 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLNS--SKLIENSE 282 (771)
Q Consensus 247 ------~~~~~IP~~l~~~i~~lL~~~P~~Rps~--~~lL~~~~ 282 (771)
.....+|..+.+++.+||..+|.+|++. .++++|++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~ 257 (258)
T cd05578 214 QETADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPY 257 (258)
T ss_pred hccccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCC
Confidence 1113467889999999999999999999 99998843
No 166
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=2.6e-30 Score=272.49 Aligned_cols=240 Identities=15% Similarity=0.195 Sum_probs=189.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|. | .||.|++..+++.|+||++..... .....+++|+.+++.++||||+++++.+...
T Consensus 7 ~~~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~---- 78 (267)
T cd06645 7 PQEDFELIQRIGSGTYG--DVYKARNVNTGELAAIKVIKLEPG--EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR---- 78 (267)
T ss_pred cHHHHHHHHHhCCCCCe--EEEEEEEcCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC----
Confidence 456899999999998 7 899999999999999999976432 2345678899999999999999999998763
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|.+++..... .....+.+++.||+.||.|||+ .+++|+||||+||+++.+|.+||+||
T Consensus 79 ----~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nili~~~~~~~l~df 150 (267)
T cd06645 79 ----DKLWICMEFCGGGSLQDIYHVTGP---LSESQIAYVSRETLQGLYYLHS-KGKMHRDIKGANILLTDNGHVKLADF 150 (267)
T ss_pred ----CEEEEEEeccCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEECcc
Confidence 4899999999 479998876543 2345567779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----h---
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L--- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l--- 246 (771)
|++......... .....+...|+|||++... ....++.++|+|||||++|+|++|..|+.... .
T Consensus 151 g~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~---~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~ 221 (267)
T cd06645 151 GVSAQITATIAK------RKSFIGTPYWMAPEVAAVE---RKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM 221 (267)
T ss_pred eeeeEccCcccc------cccccCcccccChhhhccc---cCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhh
Confidence 998765432110 1112334589999987421 01346678999999999999999987763211 0
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 247 ----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
.....++..+.+++.+||..+|.+||++.++++|+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~ 266 (267)
T cd06645 222 TKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHP 266 (267)
T ss_pred hccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCC
Confidence 01123566788999999999999999999999884
No 167
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.97 E-value=3.8e-30 Score=275.10 Aligned_cols=239 Identities=15% Similarity=0.206 Sum_probs=184.6
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
-.|++.+.||.|. | .||.|.++.+|+.|+||++..+... .....+.+|+..++.++||||++++++++.+
T Consensus 5 ~~y~~~~~ig~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~------ 75 (291)
T cd07870 5 TSYLNLEKLGEGSYA--TVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKHANIVLLHDIIHTK------ 75 (291)
T ss_pred ceeEEEEEEEecCCE--EEEEEEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcCCCCEeEEEEEEecC------
Confidence 4699999999998 8 9999999999999999999754322 2233567899999999999999999998763
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...|+||||+ ++|...+..... ......+..++.||+.||.|||+ .+++|+||||+||+++.+|.+||+|||++
T Consensus 76 --~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~ 150 (291)
T cd07870 76 --ETLTFVFEYMHTDLAQYMIQHPG--GLHPYNVRLFMFQLLRGLAYIHG-QHILHRDLKPQNLLISYLGELKLADFGLA 150 (291)
T ss_pred --CeEEEEEecccCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChHHEEEcCCCcEEEeccccc
Confidence 4889999999 567666654321 12234456678999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----h----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-----R---- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-----~---- 247 (771)
+........ ......+..|+|||++.+. ..++.++|+|||||++|+|++|..+|..... .
T Consensus 151 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~ 219 (291)
T cd07870 151 RAKSIPSQT------YSSEVVTLWYRPPDVLLGA-----TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWT 219 (291)
T ss_pred cccCCCCCC------CCCccccccccCCceeecC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHH
Confidence 764332111 1112234589999998642 2355689999999999999999988742110 0
Q ss_pred --------------cc----------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 --------------NT----------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 --------------~~----------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.. ...+..+.+++.+|+..+|.+|||+.+++.|++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~ 290 (291)
T cd07870 220 VLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPY 290 (291)
T ss_pred HcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCC
Confidence 00 011346778999999999999999999999943
No 168
>PHA02988 hypothetical protein; Provisional
Probab=99.97 E-value=1.7e-30 Score=277.81 Aligned_cols=232 Identities=15% Similarity=0.060 Sum_probs=178.6
Q ss_pred CCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 26 PYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 26 ~ig~G~g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
.++.|+ ...||+|.. +|+.|+||.+....... ...+.+.+|+.+|++++||||+++++++.....+ ...+|+
T Consensus 27 ~i~~g~-~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~----~~~~~l 99 (283)
T PHA02988 27 LIKEND-QNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDD----LPRLSL 99 (283)
T ss_pred EEeeCC-ceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccC----CCceEE
Confidence 345554 339999987 68999999997653332 3457788999999999999999999998751111 347899
Q ss_pred EecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCC
Q 004157 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (771)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~ 182 (771)
||||+ ++|.+++....... ......++.|++.||.|||+..+++||||||+||+++.+|.+||+|||++......
T Consensus 100 v~Ey~~~g~L~~~l~~~~~~~---~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~ 176 (283)
T PHA02988 100 ILEYCTRGYLREVLDKEKDLS---FKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP 176 (283)
T ss_pred EEEeCCCCcHHHHHhhCCCCC---hhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc
Confidence 99999 46999997654322 22233458999999999997568999999999999999999999999998765432
Q ss_pred CCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc-------------c
Q 004157 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------------T 249 (771)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~-------------~ 249 (771)
. ........|+|||++.+.. ..++.++|+|||||++|||++|..||....... .
T Consensus 177 ~---------~~~~~~~~y~aPE~~~~~~----~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~ 243 (283)
T PHA02988 177 P---------FKNVNFMVYFSYKMLNDIF----SEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKL 243 (283)
T ss_pred c---------ccccCcccccCHHHhhhcc----ccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCC
Confidence 1 1123345899999986521 356789999999999999999998886432110 1
Q ss_pred -CCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 250 -ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 250 -~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..+|..+.+++.+||+.+|..||++.++++.
T Consensus 244 ~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 275 (283)
T PHA02988 244 PLDCPLEIKCIVEACTSHDSIKRPNIKEILYN 275 (283)
T ss_pred CCcCcHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 1467789999999999999999999998864
No 169
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.97 E-value=4.1e-30 Score=269.42 Aligned_cols=241 Identities=18% Similarity=0.225 Sum_probs=189.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
++..|++.+.+|.|. | .||.|.++.+++.|+||++...... ....+.+|++++++++||||+++++.+...
T Consensus 1 ~~~~~~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---- 72 (262)
T cd06613 1 PQEDYELIQRIGSGTYG--DVYKARDIATGELVAIKVIKLEPGD--DFEIIQQEISMLKECRHPNIVAYFGSYLRR---- 72 (262)
T ss_pred CccceEEEEEecCCCce--EEEEeEecCCCCEEEEEEEEcCchh--hHHHHHHHHHHHHhCCCCChhceEEEEEeC----
Confidence 356799999999987 6 9999999999999999999865332 457788999999999999999999998763
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|++|||+ +.|.+++..... ......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 73 ----~~~~l~~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~ni~i~~~~~~~l~d~ 145 (262)
T cd06613 73 ----DKLWIVMEYCGGGSLQDIYQVTRG--PLSELQIAYVCRETLKGLAYLHE-TGKIHRDIKGANILLTEDGDVKLADF 145 (262)
T ss_pred ----CEEEEEEeCCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHh-CCceecCCChhhEEECCCCCEEECcc
Confidence 4899999999 468888876421 12244466779999999999996 99999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----h---
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L--- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l--- 246 (771)
|++......... .........|++||...+... ..++.++|+|||||++|+|++|.+|+.... .
T Consensus 146 g~~~~~~~~~~~------~~~~~~~~~y~~Pe~~~~~~~---~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~ 216 (262)
T cd06613 146 GVSAQLTATIAK------RKSFIGTPYWMAPEVAAVERK---GGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLI 216 (262)
T ss_pred ccchhhhhhhhc------cccccCCccccCchhhccccc---CCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 998765432110 011123347999999765210 245678999999999999999998874321 0
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 247 ----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
.....++..+.+++.+|+..+|..||++.+++.|.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~ 261 (262)
T cd06613 217 SKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHP 261 (262)
T ss_pred HhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence 01123456788999999999999999999999884
No 170
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97 E-value=4.3e-31 Score=288.35 Aligned_cols=234 Identities=18% Similarity=0.240 Sum_probs=179.1
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC---CCCCeeEEeeeEEecccCcCCcccE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV---RHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L---rHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
||.|+ | +||+|+++.+|+.|+||++.+... .........+|..++..+ +||||+++++.++.. ..
T Consensus 1 lG~G~~g--~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~--------~~ 70 (330)
T cd05586 1 IGKGTFG--QVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTD--------SD 70 (330)
T ss_pred CCCCCce--EEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecC--------Ce
Confidence 56777 8 999999999999999999975321 112233344566666655 699999999999874 48
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+|+||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~~lv~e~~~~g~L~~~l~~~~~~---~~~~~~~~~~qil~al~~LH~-~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 71 LYLVTDYMSGGELFWHLQKEGRF---SEDRAKFYIAELVLALEHLHK-YDIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred EEEEEcCCCCChHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 99999999 4788888765432 344466679999999999996 89999999999999999999999999998754
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc----c------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN----T------ 249 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~----~------ 249 (771)
...... .....++..|+|||++.+. ..++.++|+|||||++|+|++|..||....... +
T Consensus 147 ~~~~~~------~~~~~gt~~y~aPE~~~~~-----~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~ 215 (330)
T cd05586 147 LTDNKT------TNTFCGTTEYLAPEVLLDE-----KGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVR 215 (330)
T ss_pred CCCCCC------ccCccCCccccCHHHHcCC-----CCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCC
Confidence 321110 1122345589999998653 346788999999999999999998875432211 1
Q ss_pred ---CCCCcchHHHHHHHhccCCCCCC----ChHHHhhCCCCCcc
Q 004157 250 ---ASIPKSLLPDYQRLLSSMPSRRL----NSSKLIENSEYFQN 286 (771)
Q Consensus 250 ---~~IP~~l~~~i~~lL~~~P~~Rp----s~~~lL~~~~fF~n 286 (771)
..++..+.+++++||+.+|.+|+ ++.++++| +||.+
T Consensus 216 ~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h-~~~~~ 258 (330)
T cd05586 216 FPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH-PFFAD 258 (330)
T ss_pred CCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC-ccccC
Confidence 23567788999999999999998 68899988 56654
No 171
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.97 E-value=3.2e-30 Score=274.16 Aligned_cols=239 Identities=18% Similarity=0.237 Sum_probs=186.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCC-----CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDG-----SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g-----~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
.|++.+.||.|+ | .||.|.....+ ..|++|.+.... .......+.+|++.+++++||||+++++++...
T Consensus 6 ~~~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~-- 80 (283)
T cd05048 6 AVRFLEELGEGAFG--KVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE-- 80 (283)
T ss_pred HcchhhcccCccCC--cEEEEEEecCCCCcceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC--
Confidence 589999999998 8 99999976555 679999987543 234456788999999999999999999998753
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCC-------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCC
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~ 158 (771)
...|++|||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||+
T Consensus 81 ------~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~-~~i~H~dlkp~ 153 (283)
T cd05048 81 ------QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS-HHFVHRDLAAR 153 (283)
T ss_pred ------CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccccccc
Confidence 3789999999 5799999765321 112334466779999999999996 89999999999
Q ss_pred CEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-C
Q 004157 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-G 237 (771)
Q Consensus 159 NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g 237 (771)
||+++.++.+||+|||++......... ........+..|+|||++.+ ..++.++|+|||||++|||++ |
T Consensus 154 Nil~~~~~~~~L~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~sDv~slG~il~el~~~g 223 (283)
T cd05048 154 NCLVGEGLTVKISDFGLSRDIYSADYY----RVQSKSLLPVRWMPPEAILY------GKFTTESDIWSFGVVLWEIFSYG 223 (283)
T ss_pred eEEEcCCCcEEECCCcceeeccccccc----cccCCCcccccccCHHHhcc------CcCchhhhHHHHHHHHHHHHcCC
Confidence 999999999999999998765432110 00111233457999998765 356678999999999999997 8
Q ss_pred CCCCChh---hh----h------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 238 MRLSKTE---EL----R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 238 ~~p~~~~---~l----~------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..||... ++ . ....+|..+.+++.+|++.+|.+||++.+++++
T Consensus 224 ~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 224 LQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred CCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 7776431 11 0 113467889999999999999999999998865
No 172
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.97 E-value=5.6e-30 Score=272.47 Aligned_cols=231 Identities=16% Similarity=0.139 Sum_probs=184.2
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.+|.|. | .||+|++..+++.|+||++..... ......+.+|++++++++||||+++++.++.+
T Consensus 2 ~~~~~~~lg~g~~~--~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 71 (279)
T cd06619 2 DIQYQEILGHGNGG--TVYKAYHLLTRRILAVKVIPLDIT-VELQKQIMSELEILYKCDSPYIIGFYGAFFVE------- 71 (279)
T ss_pred cchheeeeccCCCe--EEEEEEEcCCCcEEEEEEEecCCC-hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC-------
Confidence 478889999998 8 999999999999999999976432 23455688999999999999999999999874
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...|+||||+ +.|..+. . .....+..++.||+.||.|||+ .+++|+||||+||+++.+|.+||+|||++
T Consensus 72 -~~~~lv~e~~~~~~l~~~~-~------~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nill~~~~~~~l~dfg~~ 142 (279)
T cd06619 72 -NRISICTEFMDGGSLDVYR-K------IPEHVLGRIAVAVVKGLTYLWS-LKILHRDVKPSNMLVNTRGQVKLCDFGVS 142 (279)
T ss_pred -CEEEEEEecCCCCChHHhh-c------CCHHHHHHHHHHHHHHHHHHHH-CCEeeCCCCHHHEEECCCCCEEEeeCCcc
Confidence 3789999999 3454331 1 1234466779999999999996 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----------- 245 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----------- 245 (771)
....... ......+..|+|||++.+ ..++.++|+|||||++|+|++|..||....
T Consensus 143 ~~~~~~~--------~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 208 (279)
T cd06619 143 TQLVNSI--------AKTYVGTNAYMAPERISG------EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQL 208 (279)
T ss_pred eeccccc--------ccCCCCChhhcCceeecC------CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHH
Confidence 7654321 111234458999999875 356789999999999999999998874311
Q ss_pred hh--------c--cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 246 LR--------N--TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 246 l~--------~--~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
.. . ...++..+.+++.+||..+|.+||++.++++|.++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~ 256 (279)
T cd06619 209 LQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFI 256 (279)
T ss_pred HHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccc
Confidence 00 0 12356678899999999999999999999998443
No 173
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.97 E-value=5.4e-30 Score=269.74 Aligned_cols=242 Identities=17% Similarity=0.234 Sum_probs=187.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc----hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ----DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~----~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
.|++++.||.|+ | +||+|.. .+|+.|+||.+..+... ......+++|+..|++++||||+++++++...
T Consensus 1 ~~~~~~~ig~g~~~--~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--- 74 (265)
T cd06631 1 EWTKGEVLGKGAYG--TVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD--- 74 (265)
T ss_pred CccccceEeccCCe--EEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC---
Confidence 488999999997 7 9999986 47899999998754322 23456788999999999999999999999863
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+|+||+ ++|.+++.+... .....+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|
T Consensus 75 -----~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~l~d 145 (265)
T cd06631 75 -----NTISIFMEFVPGGSISSILNRFGP---LPEPVFCKYTKQILDGVAYLHN-NCVVHRDIKGNNVMLMPNGIIKLID 145 (265)
T ss_pred -----CeEEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCcccCCcCHHhEEECCCCeEEecc
Confidence 4899999999 479999876532 2344466679999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----h--
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L-- 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l-- 246 (771)
||++........................|+|||+..+ ..++.++|+|||||++|++++|..||.... .
T Consensus 146 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~------~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~ 219 (265)
T cd06631 146 FGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINE------SGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFY 219 (265)
T ss_pred chhhHhhhhccccccccccccccCCCccccChhhhcC------CCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHH
Confidence 9998765321111000000112234457999999875 345678999999999999999998875321 0
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 ---------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.....++..+.+++++||..+|.+||++.++++|++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~ 264 (265)
T cd06631 220 IGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDF 264 (265)
T ss_pred hhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCC
Confidence 011234567889999999999999999999999843
No 174
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=2.6e-30 Score=308.20 Aligned_cols=245 Identities=19% Similarity=0.195 Sum_probs=192.9
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
.-.+|++.+.||.|+ | +||+|+++.++..|++|++............+.+|+.+|+.|+||||++++++|....
T Consensus 11 ~l~~YeIl~kLG~GgFG--tVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~--- 85 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFG--EVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA--- 85 (1021)
T ss_pred ccCCEEEEEEEecCCCe--EEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC---
Confidence 345799999999998 8 9999999999999999999876555555677889999999999999999999987644
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhC-CCCCCcHHHHHHHHHHHHHHHHHHHcC------CCceecCCCCCCEEEcC--
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNND------CKLVHGNVCLSSVVVTQ-- 164 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~-~~~~~~~~~i~~gl~QI~~aL~fLH~~------~~ivH~dIkp~NI~v~~-- 164 (771)
...+||||||| ++|.++|.... .........++.++.||+.||.|||+. .+||||||||+||||+.
T Consensus 86 ---~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~ 162 (1021)
T PTZ00266 86 ---NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGI 162 (1021)
T ss_pred ---CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCc
Confidence 34899999999 57999887632 122234455777799999999999962 24999999999999964
Q ss_pred ---------------CCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHH
Q 004157 165 ---------------TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGC 229 (771)
Q Consensus 165 ---------------~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~ 229 (771)
.+.+||+|||++........ .....++..|+|||++.+.. ..++.++|||||||
T Consensus 163 ~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~-------~~s~vGTp~YmAPEvL~ge~----~~~s~KSDVWSLG~ 231 (1021)
T PTZ00266 163 RHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM-------AHSCVGTPYYWSPELLLHET----KSYDDKSDMWALGC 231 (1021)
T ss_pred cccccccccccccCCCCceEEccCCcccccccccc-------ccccCCCccccCHHHHhccC----CCCCchhHHHHHHH
Confidence 34489999999976543211 11223456899999985421 24567899999999
Q ss_pred HHHHHhhCCCCCChhh----h----hc-----cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 230 LIYELFSGMRLSKTEE----L----RN-----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 230 li~el~~g~~p~~~~~----l----~~-----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
++|+|++|..||.... + .. ...++..+.+++.+||..+|..||++.++|.+
T Consensus 232 ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 232 IIYELCSGKTPFHKANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred HHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 9999999999885321 1 11 12346779999999999999999999999987
No 175
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-30 Score=285.61 Aligned_cols=231 Identities=16% Similarity=0.178 Sum_probs=182.5
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
+++.++||.|. | .||.|..+ ....|+||.+...... .+.+.+|+++|++|+|+|||+++.+++.+.
T Consensus 208 l~l~~~LG~G~FG--~V~~g~~~-~~~~vavk~ik~~~m~---~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~------- 274 (468)
T KOG0197|consen 208 LKLIRELGSGQFG--EVWLGKWN-GSTKVAVKTIKEGSMS---PEAFLREAQIMKKLRHEKLVKLYGVCTKQE------- 274 (468)
T ss_pred HHHHHHhcCCccc--eEEEEEEc-CCCcccceEEeccccC---hhHHHHHHHHHHhCcccCeEEEEEEEecCC-------
Confidence 45667899999 9 99999997 3459999999865433 245668999999999999999999998642
Q ss_pred cEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 100 ~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
-+||||||+ ++|.++|+...... .....+.....||++|++||++ .++|||||-..||+|++++.+|++|||+++
T Consensus 275 -piyIVtE~m~~GsLl~yLr~~~~~~-l~~~~Ll~~a~qIaeGM~YLes-~~~IHRDLAARNiLV~~~~~vKIsDFGLAr 351 (468)
T KOG0197|consen 275 -PIYIVTEYMPKGSLLDYLRTREGGL-LNLPQLLDFAAQIAEGMAYLES-KNYIHRDLAARNILVDEDLVVKISDFGLAR 351 (468)
T ss_pred -ceEEEEEecccCcHHHHhhhcCCCc-cchHHHHHHHHHHHHHHHHHHh-CCccchhhhhhheeeccCceEEEccccccc
Confidence 699999999 78999999832211 1222344559999999999996 899999999999999999999999999999
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhC-CCCCChhh-----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG-MRLSKTEE----------- 245 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g-~~p~~~~~----------- 245 (771)
...++... ...+...|..|.|||.+..+ .++.++|+||||+||||||+- +.|+....
T Consensus 352 ~~~d~~Y~-----~~~~~kfPIkWtAPEa~~~~------~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~G 420 (468)
T KOG0197|consen 352 LIGDDEYT-----ASEGGKFPIKWTAPEALNYG------KFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERG 420 (468)
T ss_pred ccCCCcee-----ecCCCCCCceecCHHHHhhC------CcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhcc
Confidence 55442110 12223345589999999873 678899999999999999994 45543221
Q ss_pred --hhccCCCCcchHHHHHHHhccCCCCCCChHHHh
Q 004157 246 --LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLI 278 (771)
Q Consensus 246 --l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL 278 (771)
+......|..+.++++.|+..+|+.|||++.+.
T Consensus 421 yRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 421 YRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred CcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 223367899999999999999999999998654
No 176
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.97 E-value=6.6e-31 Score=261.28 Aligned_cols=255 Identities=16% Similarity=0.191 Sum_probs=203.1
Q ss_pred CCCCCceecCCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 16 VKDLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+.+.+|.|.+.+|.|+.. -||.++...++..||+|++-..+ .+..+.+++|+...|+++||||+++++....+..|+
T Consensus 18 In~~Ryri~~~LgeGGfs-fv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFS-FVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDG 94 (302)
T ss_pred EcCceEEEeeeecCCCce-eeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccC
Confidence 456789999999999722 79999999999999999998765 335678899999999999999999999986655543
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCC-CCcHHHHHHHHHHHHHHHHHHHcCCC--ceecCCCCCCEEEcCCCcEEE
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEG-SQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~-~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dIkp~NI~v~~~G~~KL 170 (771)
+...||++.|. ++|.+.|......+ ...+..+.|++.+|++||++||+ .. +.||||||.||++++.|..+|
T Consensus 95 ---~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~-~~~~yAH~DiKP~NILls~~~~~vl 170 (302)
T KOG2345|consen 95 ---KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHE-KEPPYAHRDIKPANILLSDSGLPVL 170 (302)
T ss_pred ---ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhc-cCCcccccCCCcceeEecCCCceEE
Confidence 66899999999 78999999877655 34455688899999999999996 76 999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCcccc---ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQY---AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-- 245 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~---~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-- 245 (771)
.|||-++...-.-.......... ...++..|+|||++.-. .....+.++|||||||++|+|+.|..||+...
T Consensus 171 ~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk---~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~ 247 (302)
T KOG2345|consen 171 MDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVK---SHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ 247 (302)
T ss_pred EeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecc---cCcccccccchhhhhHHHHHHHHcCCcchHHhhc
Confidence 99999986643211111111111 22456689999998642 11345679999999999999999998885321
Q ss_pred --------------hhccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 --------------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 --------------l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..+...++..+.++++.||+.+|.+||++.+++.+
T Consensus 248 GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 248 GGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred CCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 11224577889999999999999999999999875
No 177
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.97 E-value=4.7e-30 Score=270.25 Aligned_cols=237 Identities=16% Similarity=0.239 Sum_probs=186.9
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|++.+.+|.|. | .||+|.++.+++.|++|++.... .....+.+|++.++.++||||+++++.+..+
T Consensus 5 ~~~~~~~~~ig~g~~~--~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 74 (263)
T cd05052 5 RTDITMKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE----- 74 (263)
T ss_pred hHHeEEeeecCCcccc--eEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcCC-----
Confidence 34589999999998 8 89999999999999999987432 2345678899999999999999999998764
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|.+++...... ......+.+++.|++.||.|||+ .+++||||||+||+++.++.+||+|||
T Consensus 75 ---~~~~lv~e~~~~~~L~~~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~nil~~~~~~~kl~df~ 149 (263)
T cd05052 75 ---PPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLVGENHLVKVADFG 149 (263)
T ss_pred ---CCcEEEEEeCCCCcHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHh-CCEeecccCcceEEEcCCCcEEeCCCc
Confidence 3789999999 5799988764321 12344566779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------- 246 (771)
++.......... ......+..|++||...+ ..++.++|+|||||++|||++ |..|+.....
T Consensus 150 ~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~ 218 (263)
T cd05052 150 LSRLMTGDTYTA-----HAGAKFPIKWTAPESLAY------NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 218 (263)
T ss_pred cccccccceeec-----cCCCCCccccCCHHHhcc------CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 998765421100 001112346999998865 356678999999999999998 7777643211
Q ss_pred h------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ~------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. ....+|..+.+++.+||..+|++||++.++++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 219 EKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred HCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 1 123567789999999999999999999998753
No 178
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=2.1e-30 Score=298.82 Aligned_cols=256 Identities=16% Similarity=0.204 Sum_probs=185.1
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCC-cEEEEEEe--------------CC-CCchhHHHHHHHHHHHHhcCCCCCe
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGS-PVSIFSIS--------------GT-NAQDGHLAAARNGVKRLRTVRHPNI 81 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~-~VaIK~~~--------------~~-~~~~~~~~~~~~ei~~Lk~LrHPnI 81 (771)
.+|++.++||.|+ | +||.+..+.... .++++.+. +. .........+++|+++|++|+||||
T Consensus 148 ~~Y~ii~~LG~G~fG--~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 148 AHFRVIDDLPAGAFG--KIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hccEEEeEecCCCCc--ceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 3699999999998 8 999987654322 22222111 10 0112334567899999999999999
Q ss_pred eEEeeeEEecccCcCCcccEEEEEecCC-cchHHHHHHhCCCC--CCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCC
Q 004157 82 LAFLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEG--SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (771)
Q Consensus 82 lkv~d~~e~e~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~--~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~ 158 (771)
++++++++.+ ...|+|+|++ ..|..++....... ......+..++.||+.||.|||+ .+||||||||+
T Consensus 226 v~l~~~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~-~gIiHrDLKP~ 296 (501)
T PHA03210 226 LKIEEILRSE--------ANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD-KKLIHRDIKLE 296 (501)
T ss_pred CcEeEEEEEC--------CeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHH
Confidence 9999999874 3789999999 57777776543211 11123345569999999999996 89999999999
Q ss_pred CEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCC
Q 004157 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM 238 (771)
Q Consensus 159 NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~ 238 (771)
|||++.+|.+||+|||++..+.... ....+.+.++..|+|||++.+ ..++.++|+|||||++|||++|.
T Consensus 297 NILl~~~~~vkL~DFGla~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~ell~~~ 365 (501)
T PHA03210 297 NIFLNCDGKIVLGDFGTAMPFEKER-----EAFDYGWVGTVATNSPEILAG------DGYCEITDIWSCGLILLDMLSHD 365 (501)
T ss_pred HEEECCCCCEEEEeCCCceecCccc-----ccccccccCCcCCCCchhhcC------CCCCcHHHHHHHHHHHHHHHHCC
Confidence 9999999999999999998765421 111233455678999999876 35778999999999999999976
Q ss_pred CC-CChh------hhh----------------------------------------ccCCCCcchHHHHHHHhccCCCCC
Q 004157 239 RL-SKTE------ELR----------------------------------------NTASIPKSLLPDYQRLLSSMPSRR 271 (771)
Q Consensus 239 ~p-~~~~------~l~----------------------------------------~~~~IP~~l~~~i~~lL~~~P~~R 271 (771)
.+ +... ++. ....+|..+.+++.+||+.||.+|
T Consensus 366 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~R 445 (501)
T PHA03210 366 FCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLR 445 (501)
T ss_pred CCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccC
Confidence 42 2110 000 001245556677889999999999
Q ss_pred CChHHHhhCCCCCcchhhhhhhhhhh
Q 004157 272 LNSSKLIENSEYFQNKLVDTIHFMEI 297 (771)
Q Consensus 272 ps~~~lL~~~~fF~n~lv~~~~~L~~ 297 (771)
|++.++|.| +||.....+.+.++..
T Consensus 446 psa~elL~h-p~f~~~~~~~~~~~~~ 470 (501)
T PHA03210 446 PGAAELLAL-PLFSAEEEEEILFIHG 470 (501)
T ss_pred cCHHHHhhC-hhhhcCCchHHHHHHh
Confidence 999999998 7776655555555544
No 179
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.97 E-value=2e-30 Score=282.53 Aligned_cols=240 Identities=18% Similarity=0.233 Sum_probs=186.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~ 96 (771)
.|++.+.||.|+ | +||+|.++.+|+.||||++.+... .+...+.+.+|.++++.+. ||+|++++++++.+
T Consensus 1 ~f~~~~~lg~G~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~----- 73 (323)
T cd05615 1 DFNFLMVLGKGSFG--KVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTV----- 73 (323)
T ss_pred CceEEEEEEecCCe--EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecC-----
Confidence 377888999998 8 999999999999999999985422 2233456778889998886 56788899888763
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|..++...... ....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 74 ---~~~~lv~Ey~~~g~L~~~i~~~~~l---~~~~~~~i~~qi~~al~~lH~-~~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 74 ---DRLYFVMEYVNGGDLMYHIQQVGKF---KEPQAVFYAAEISVGLFFLHR-RGIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred ---CEEEEEEcCCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCCCEEEeccc
Confidence 3899999999 5798888765432 234456669999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------- 247 (771)
++........ ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||......
T Consensus 147 ~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~ 214 (323)
T cd05615 147 MCKEHMVDGV------TTRTFCGTPDYIAPEIIAY------QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM 214 (323)
T ss_pred cccccCCCCc------cccCccCCccccCHHHHcC------CCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9875432111 1112234558999999875 35678999999999999999999998643211
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCCh-----HHHhhCCCCCcc
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENSEYFQN 286 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~-----~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+|++. .++++| +||..
T Consensus 215 ~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h-~~f~~ 262 (323)
T cd05615 215 EHNVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREH-AFFRR 262 (323)
T ss_pred hCCCCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC-cccCC
Confidence 113456778889999999999999974 567777 56654
No 180
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.97 E-value=5.2e-30 Score=268.29 Aligned_cols=236 Identities=19% Similarity=0.260 Sum_probs=188.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|+ | .||.+.++.++..|++|.+..... ....+.+.+|+.+++.++||||+++++.++..
T Consensus 1 ~y~~~~~lg~g~~g--~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 70 (255)
T cd08219 1 QYNVLRVVGEGSFG--RALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEAD------- 70 (255)
T ss_pred CceEEEEeeccCCe--EEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEEC-------
Confidence 589999999998 7 999999999999999999975432 23456788999999999999999999999863
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.++|+|||++
T Consensus 71 -~~~~lv~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dl~p~nili~~~~~~~l~dfg~~ 147 (255)
T cd08219 71 -GHLYIVMEYCDGGDLMQKIKLQRGK-LFPEDTILQWFVQMCLGVQHIHE-KRVLHRDIKSKNIFLTQNGKVKLGDFGSA 147 (255)
T ss_pred -CEEEEEEeeCCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCcceEEECCCCcEEEcccCcc
Confidence 4899999999 4688887653221 12344456668999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc--------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-------- 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~-------- 248 (771)
........ ......+...|+|||++.+ ..++.++|+||||+++|+|++|..||.......
T Consensus 148 ~~~~~~~~------~~~~~~~~~~~~aPE~~~~------~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~ 215 (255)
T cd08219 148 RLLTSPGA------YACTYVGTPYYVPPEIWEN------MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQG 215 (255)
T ss_pred eeeccccc------ccccccCCccccCHHHHcc------CCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcC
Confidence 76643211 0112234457999999865 356778999999999999999999886543211
Q ss_pred -----cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 249 -----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 249 -----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...++..+.+++.+||+.+|.+||++.+++..
T Consensus 216 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 216 SYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 12355668889999999999999999999864
No 181
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.97 E-value=6.3e-30 Score=270.04 Aligned_cols=249 Identities=16% Similarity=0.217 Sum_probs=190.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~ 95 (771)
...|++.+.+|.|+ | +||+|..+.+++.|+||++...... ...+.+|+..++++ +||||+++++.+..+...
T Consensus 5 ~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~~aik~~~~~~~~---~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~- 78 (272)
T cd06637 5 AGIFELVELVGNGTYG--QVYKGRHVKTGQLAAIKVMDVTGDE---EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP- 78 (272)
T ss_pred hhhhhHHHheeecCCe--EEEEEEEcCCCcEEEEEEEEcCCcc---HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC-
Confidence 45699999999998 8 9999999999999999999864322 34577899999998 699999999998764321
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.....+|+||||+ ++|.+++..... .......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 79 -~~~~~~~iv~e~~~~~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~-~~ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 79 -GMDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQ-HKVIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred -CCCcEEEEEEEcCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHH-CCCccCCCCHHHEEECCCCCEEEccC
Confidence 0124799999999 479888876431 122345566679999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++......... .....+...|+|||++.+.-. ....++.++|+|||||++|+|++|..|+.....
T Consensus 156 g~~~~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~-~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~ 228 (272)
T cd06637 156 GVSAQLDRTVGR------RNTFIGTPYWMAPEVIACDEN-PDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 228 (272)
T ss_pred CCceeccccccc------CCcccccccccCHhHhccccC-cCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH
Confidence 998765432110 111223447999999863210 012466789999999999999999988743210
Q ss_pred -------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 -------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 -------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.....++..+.+++.+||..+|.+||++.+++.|+|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 271 (272)
T cd06637 229 PRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPF 271 (272)
T ss_pred hcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCC
Confidence 011346778999999999999999999999999854
No 182
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.97 E-value=5.5e-30 Score=269.73 Aligned_cols=238 Identities=18% Similarity=0.209 Sum_probs=186.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.+|.|. | .||+|+++.+++.|+||.+..... .......+.+|++++++++||||+++++.+...
T Consensus 3 ~~~i~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 74 (267)
T cd08228 3 NFQIEKKIGRGQFS--EVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED------ 74 (267)
T ss_pred ceeeeeeeccCCCe--eEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC------
Confidence 599999999998 8 899999999999999999875322 234456678899999999999999999998863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCC-CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+|+||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||+|+||+++.+|.++|+|||
T Consensus 75 --~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~~~nil~~~~~~~~l~d~g 151 (267)
T cd08228 75 --NELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS-RRVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred --CeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh-CCeeCCCCCHHHEEEcCCCCEEECccc
Confidence 3889999999 4788877653221 112344456669999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------- 246 (771)
++......... .........|+|||.+.+ ..++.++|+|||||++|+|++|..|+.....
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~~~~aPE~~~~------~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~ 219 (267)
T cd08228 152 LGRFFSSKTTA------AHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQK 219 (267)
T ss_pred cceeccchhHH------HhcCCCCccccChhhhcc------CCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHH
Confidence 98766432110 111223457999998865 3566789999999999999999987643211
Q ss_pred -hc-------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 -RN-------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 -~~-------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.. ...++..+.+++.+|+..+|.+||++.++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 220 IEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred HhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 00 12355668999999999999999999998863
No 183
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.97 E-value=6.1e-30 Score=269.52 Aligned_cols=241 Identities=14% Similarity=0.199 Sum_probs=185.5
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
.+|++++.+|.|+ | .||.|.++.+|..|+||++...... ......+++|++.+++++||||+++++++....
T Consensus 2 ~~~~~~~~l~~g~~g--~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 77 (265)
T cd06652 2 TNWRLGKLLGQGAFG--RVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPM-- 77 (265)
T ss_pred CcceEeeEEecCCce--EEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCC--
Confidence 3699999999998 8 8999999999999999998643221 234668889999999999999999999887543
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
...+|+||||+ ++|.+++...... ....+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|
T Consensus 78 ----~~~~~~v~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~l~D 149 (265)
T cd06652 78 ----ERTLSIFMEHMPGGSIKDQLKSYGAL---TENVTRKYTRQILEGVSYLHS-NMIVHRDIKGANILRDSVGNVKLGD 149 (265)
T ss_pred ----CceEEEEEEecCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEecCCCCEEECc
Confidence 23789999999 4799988765432 233455669999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hhc
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LRN 248 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~~ 248 (771)
||++............ .........|+|||+..+ ..++.++|+|||||++|++++|..||.... ...
T Consensus 150 fg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~ 220 (265)
T cd06652 150 FGASKRLQTICLSGTG---MKSVTGTPYWMSPEVISG------EGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFK 220 (265)
T ss_pred Cccccccccccccccc---cccCCCCccccChhhhcC------CCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHH
Confidence 9998765431110000 011123448999999865 345678999999999999999998875321 100
Q ss_pred ------cC----CCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 249 ------TA----SIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 249 ------~~----~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
.. .++..+.+++.+|+. +|+.||+++++++|+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~ 262 (265)
T cd06652 221 IATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHT 262 (265)
T ss_pred HhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCc
Confidence 11 233456778888884 899999999999984
No 184
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.97 E-value=7.6e-30 Score=268.82 Aligned_cols=251 Identities=18% Similarity=0.214 Sum_probs=192.1
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d 94 (771)
+..+|++.+.++.|. | +||.|.++.+++.|++|++..... ..+.+.+|+..++++ .||||+++++.+......
T Consensus 4 ~~~~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (275)
T cd06608 4 PTGIFELVEVIGEGTYG--KVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPP 78 (275)
T ss_pred chhheeheeeecCCCCe--EEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCC
Confidence 346799999999997 7 999999999999999999986432 245688999999999 699999999999764310
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhC-CCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~-~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
.....+|+||||+ ++|.+++.... .........+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+
T Consensus 79 --~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~-~~i~H~~l~p~ni~~~~~~~~~l~ 155 (275)
T cd06608 79 --GNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE-NKVIHRDIKGQNILLTKNAEVKLV 155 (275)
T ss_pred --CcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc-CCcccCCCCHHHEEEccCCeEEEC
Confidence 0034789999999 47888876532 11223455577789999999999996 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hh
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~ 247 (771)
|||++......... .........|+|||++..... ....++.++|+|||||++|++++|..||.... +.
T Consensus 156 d~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 228 (275)
T cd06608 156 DFGVSAQLDSTLGR------RNTFIGTPYWMAPEVIACDEQ-PDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALF 228 (275)
T ss_pred CCccceecccchhh------hcCccccccccCHhHhccccc-ccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHH
Confidence 99998765432110 111233457999998754211 11345678999999999999999998875321 10
Q ss_pred c-----------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 N-----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ~-----------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
. ...++..+.+++.+||..+|.+||++.++++|+|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~ 274 (275)
T cd06608 229 KIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPF 274 (275)
T ss_pred HhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCC
Confidence 0 1124567889999999999999999999999854
No 185
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.97 E-value=1e-29 Score=264.39 Aligned_cols=241 Identities=19% Similarity=0.270 Sum_probs=194.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|.+.+.++.|+ | .||+|+++.++..|+||++..........+.+++|++.+++++||||+++++.+....
T Consensus 1 ~~~~~~~i~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------ 72 (260)
T cd06606 1 EWTRGELLGRGSFG--SVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE------ 72 (260)
T ss_pred CceeeeEeeecCce--EEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC------
Confidence 488889999886 6 9999999999999999999876544455778899999999999999999999998642
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
+..+|+|||++ ++|.+++.... ......+..++.|++.+|.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 73 ~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~-~~~~h~dl~p~ni~i~~~~~~~l~d~~~~ 148 (260)
T cd06606 73 KNTLNIFLEYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHS-NGIVHRDIKGANILVDSDGVVKLADFGCA 148 (260)
T ss_pred CCeEEEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCHHHEEEcCCCCEEEcccccE
Confidence 14899999999 46988888764 23344566779999999999996 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--------hh-
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--------LR- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~--------l~- 247 (771)
.......... ..........|++||..... ..+.++|+|+|||++|++++|..++.... ..
T Consensus 149 ~~~~~~~~~~----~~~~~~~~~~y~~pE~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 218 (260)
T cd06606 149 KRLGDIETGE----GTGSVRGTPYWMAPEVIRGE------EYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS 218 (260)
T ss_pred Eecccccccc----cccCCCCCccccCHhhhcCC------CCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc
Confidence 8776532100 01112234489999998763 46789999999999999999998875432 00
Q ss_pred --c----cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 --N----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 --~----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
. ...++..+.+++.+|+..+|.+||++.++++|++
T Consensus 219 ~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~ 259 (260)
T cd06606 219 SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPF 259 (260)
T ss_pred cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCC
Confidence 1 1245677999999999999999999999999954
No 186
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.5e-31 Score=280.53 Aligned_cols=238 Identities=19% Similarity=0.243 Sum_probs=193.5
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|.+.+.+|.|. . .|-.|++--+|+.||||++++...++-....+.+|++.+|.++||||+++|+++.+ .
T Consensus 20 YDLekTlG~GHFA--VVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDT--------Q 89 (864)
T KOG4717|consen 20 YDLEKTLGRGHFA--VVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDT--------Q 89 (864)
T ss_pred ehhhhhhcCCcee--hhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcc--------c
Confidence 99999999986 5 78889999999999999999987777556678889999999999999999999987 4
Q ss_pred cEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE-cCCCcEEEEccCcc
Q 004157 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV-TQTLDWKLHAFDVL 176 (771)
Q Consensus 100 ~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v-~~~G~~KL~dFgla 176 (771)
+.+|+|.|.= ++|+++|-+.... ..++.-+.++.||+.|+.|||+ ..+|||||||+||++ ..-|-+||.||||+
T Consensus 90 TKlyLiLELGD~GDl~DyImKHe~G--l~E~La~kYF~QI~~AI~YCHq-LHVVHRDLKPENVVFFEKlGlVKLTDFGFS 166 (864)
T KOG4717|consen 90 TKLYLILELGDGGDLFDYIMKHEEG--LNEDLAKKYFAQIVHAISYCHQ-LHVVHRDLKPENVVFFEKLGLVKLTDFGFS 166 (864)
T ss_pred ceEEEEEEecCCchHHHHHHhhhcc--ccHHHHHHHHHHHHHHHHHHhh-hhhhcccCCcceeEEeeecCceEeeecccc
Confidence 5899999987 5899999765321 2234445569999999999996 999999999999866 45799999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh----hhhh----c
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT----EELR----N 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~----~~l~----~ 248 (771)
-.+..... -..+++...|.|||++.++ .....++||||||+++|-|.+|++||+. +.+- .
T Consensus 167 Nkf~PG~k-------L~TsCGSLAYSAPEILLGD-----sYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDC 234 (864)
T KOG4717|consen 167 NKFQPGKK-------LTTSCGSLAYSAPEILLGD-----SYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDC 234 (864)
T ss_pred ccCCCcch-------hhcccchhhccCchhhhcC-----ccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcc
Confidence 77654211 1233455699999999986 3445689999999999999999999953 2222 2
Q ss_pred cCCCC----cchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 249 TASIP----KSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 249 ~~~IP----~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
-+.+| ++..++|+.||..+|++|-+.+++..+.|.
T Consensus 235 KYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wl 273 (864)
T KOG4717|consen 235 KYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWL 273 (864)
T ss_pred cccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccc
Confidence 24455 567889999999999999999999887543
No 187
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.7e-30 Score=282.15 Aligned_cols=246 Identities=18% Similarity=0.257 Sum_probs=196.1
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEeccc
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~ 93 (771)
+.+..|++.++||.|+ + .||++.. .+.+.|++|.+.....++..+.-+++|+..|.+|+ |-+|+++||+-..+
T Consensus 358 Vkg~~Yeilk~iG~GGSS--kV~kV~~-s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d-- 432 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSS--KVFKVLN-SDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTD-- 432 (677)
T ss_pred ECcchhhHHHhhcCCCcc--eeeeeec-CCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccC--
Confidence 4556799999999997 5 9999985 46778888887766677778889999999999998 99999999997764
Q ss_pred CcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 94 DATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
.++|+|||+= .+|...|+....... .-+++.+.+|++.|++++|+ .||||.||||.|.++ -.|.+||+|
T Consensus 433 ------~~lYmvmE~Gd~DL~kiL~k~~~~~~--~~~lk~ywkqML~aV~~IH~-~gIVHSDLKPANFLl-VkG~LKLID 502 (677)
T KOG0596|consen 433 ------GYLYMVMECGDIDLNKILKKKKSIDP--DWFLKFYWKQMLLAVKTIHQ-HGIVHSDLKPANFLL-VKGRLKLID 502 (677)
T ss_pred ------ceEEEEeecccccHHHHHHhccCCCc--hHHHHHHHHHHHHHHHHHHH-hceeecCCCcccEEE-EeeeEEeee
Confidence 3999999976 589999988764322 11567779999999999996 999999999999988 678999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhcccccccccc-----CCCCCcchHHHHHHHHHHHhhCCCCCChhh--
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVR-----KSPPWSIDSWGLGCLIYELFSGMRLSKTEE-- 245 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~-----~~~~~~~Di~SLG~li~el~~g~~p~~~~~-- 245 (771)
||++..+... ...+.....+++..||+||.+...-.... -..+.++|||||||++|+|+.|++||..-.
T Consensus 503 FGIA~aI~~D----TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~ 578 (677)
T KOG0596|consen 503 FGIANAIQPD----TTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ 578 (677)
T ss_pred echhcccCcc----ccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH
Confidence 9999877653 22455556677789999999864322111 124578999999999999999999986432
Q ss_pred ---hh---------ccCCCCc--chHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 ---LR---------NTASIPK--SLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 ---l~---------~~~~IP~--~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
+. ....+|+ .+.++++.||..||++|+++.++|+|
T Consensus 579 ~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 579 IAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred HHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 11 1123333 38999999999999999999999998
No 188
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.97 E-value=5.3e-30 Score=270.73 Aligned_cols=237 Identities=18% Similarity=0.154 Sum_probs=183.1
Q ss_pred CCCceecCCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k---~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
...|++.+.||.|+ | .||+|+.+ ..+..|+||++..... ......+.+|+..+++++||||+++++++...
T Consensus 4 ~~~~~~~~~ig~G~fg--~V~~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-- 78 (266)
T cd05064 4 NKSIKIERILGTGRFG--ELCRGCLKLPSKRELPVAIHTLRAGCS-DKQRRGFLAEALTLGQFDHSNIVRLEGVITRG-- 78 (266)
T ss_pred hHHeEEeeeecccCCC--eEEEEEEecCCCceeeEEEEecCCCCC-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecC--
Confidence 45699999999999 9 99999875 3457899999876432 23345688899999999999999999998753
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++..||+
T Consensus 79 ------~~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~i~~al~~lH~-~~iiH~dikp~nili~~~~~~~l~ 149 (266)
T cd05064 79 ------NTMMIVTEYMSNGALDSFLRKHEG--QLVAGQLMGMLPGLASGMKYLSE-MGYVHKGLAAHKVLVNSDLVCKIS 149 (266)
T ss_pred ------CCcEEEEEeCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEeeccccHhhEEEcCCCcEEEC
Confidence 4789999999 468888876431 12234456669999999999996 999999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL---- 246 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l---- 246 (771)
|||.+....... .........+..|+|||++.+ ..++.++|+|||||++||+++ |..||.....
T Consensus 150 dfg~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~ 218 (266)
T cd05064 150 GFRRLQEDKSEA-----IYTTMSGKSPVLWAAPEAIQY------HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVI 218 (266)
T ss_pred CCcccccccccc-----hhcccCCCCceeecCHHHHhh------CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHH
Confidence 999876543211 011111122347999999865 356789999999999999875 8888753211
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 ---------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+|++.+|..||++.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 219 KAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred HHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 112346778899999999999999999999875
No 189
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.97 E-value=1.5e-29 Score=273.17 Aligned_cols=243 Identities=15% Similarity=0.137 Sum_probs=190.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
+...|++.+.+|.|. | +||.|+++.+|+.|+||++..... .......+.+|+++++.++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~g~~g--~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--- 87 (307)
T cd06607 13 PEKLFTDLREIGHGSFG--AVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE--- 87 (307)
T ss_pred cchhhhhheeecCCCCe--EEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC---
Confidence 456799999999997 7 999999999999999999875432 223456788999999999999999999999864
Q ss_pred cCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...|+||||+ +.|.+.+..... ......+.+++.||+.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 88 -----~~~~lv~e~~~g~l~~~~~~~~~--~l~~~~~~~~~~ql~~~L~~LH~-~~i~H~dl~p~nIl~~~~~~~kL~df 159 (307)
T cd06607 88 -----HTAWLVMEYCLGSASDILEVHKK--PLQEVEIAAICHGALQGLAYLHS-HERIHRDIKAGNILLTEPGTVKLADF 159 (307)
T ss_pred -----CeEEEEHHhhCCCHHHHHHHccc--CCCHHHHHHHHHHHHHHHHHHHH-CCceecCCCcccEEECCCCCEEEeec
Confidence 3789999999 677777654322 12344566779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------ 247 (771)
|++....... .......|+|||++.+.- ...++.++|+||||+++|||++|.+|+......
T Consensus 160 g~~~~~~~~~----------~~~~~~~y~aPE~~~~~~---~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~ 226 (307)
T cd06607 160 GSASLVSPAN----------SFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 226 (307)
T ss_pred CcceecCCCC----------CccCCccccCceeeeccC---CCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHH
Confidence 9886543211 122344799999874310 134667899999999999999999887532210
Q ss_pred ---c-----cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ---N-----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ---~-----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
. ...++..+.+++.+||+.+|.+||++.+++.|++|..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 272 (307)
T cd06607 227 AQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLR 272 (307)
T ss_pred hcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 0 1224567889999999999999999999999854433
No 190
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.97 E-value=7.9e-30 Score=270.24 Aligned_cols=243 Identities=18% Similarity=0.254 Sum_probs=192.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC---CCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR---HPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr---HPnIlkv~d~~e~e~~d~ 95 (771)
.|++.+.+|.|+ | .||+|+++.+++.|+||.+...... .....+.+|+++++.++ ||||++++++++..
T Consensus 2 ~y~~~~~l~~g~~g--~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~---- 74 (277)
T cd06917 2 LYQRLELIGRGAYG--AVYRGKHVPTGRVVALKIINLDTPD-DDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG---- 74 (277)
T ss_pred hhhhhhheeccCCc--eEEEEEEcCCCcEEEEEEecCCCCc-hhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC----
Confidence 388889999998 8 9999999999999999998764322 34566788999999997 99999999998763
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...|+||||+ ++|.++++... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.++|+||
T Consensus 75 ----~~~~lv~e~~~~~~L~~~~~~~~----l~~~~~~~i~~~i~~~l~~lh~-~~i~H~dl~p~ni~i~~~~~~~l~df 145 (277)
T cd06917 75 ----PRLWIIMEYAEGGSVRTLMKAGP----IAEKYISVIIREVLVALKYIHK-VGVIHRDIKAANILVTNTGNVKLCDF 145 (277)
T ss_pred ----CEEEEEEecCCCCcHHHHHHccC----CCHHHHHHHHHHHHHHHHHHHh-CCcccCCcCHHHEEEcCCCCEEEccC
Confidence 4889999999 47888886642 2344466679999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc-----
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN----- 248 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~----- 248 (771)
|++......... .....+...|+|||.+.++ ..++.++|+|||||++|+|++|..|+.......
T Consensus 146 g~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~ 214 (277)
T cd06917 146 GVAALLNQNSSK------RSTFVGTPYWMAPEVITEG-----KYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLI 214 (277)
T ss_pred CceeecCCCccc------cccccCCcceeCHHHhccC-----CccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcc
Confidence 998876543211 1112334579999987653 345678999999999999999999885432110
Q ss_pred -------c--CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhhh
Q 004157 249 -------T--ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVD 290 (771)
Q Consensus 249 -------~--~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv~ 290 (771)
+ ..++..+.+++.+||+.+|.+||++.+++.| .||++....
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~-~~~~~~~~~ 264 (277)
T cd06917 215 PKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKS-KWIKAHSKT 264 (277)
T ss_pred ccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC-hHhhccccC
Confidence 0 1266779999999999999999999999998 566554433
No 191
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.97 E-value=6.7e-30 Score=266.96 Aligned_cols=231 Identities=19% Similarity=0.232 Sum_probs=178.7
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iy 103 (771)
+.||.|+ | +||+|+++.+|+.|+||.+.... .......+.+|++++++++||||+++++++... ..+|
T Consensus 1 ~~lg~g~~g--~vy~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~~~ 69 (252)
T cd05084 1 ERIGRGNFG--EVFSGRLRADNTPVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK--------QPIY 69 (252)
T ss_pred CccCcccCc--cEEEEEEecCCceEEEEecCccC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC--------CCeE
Confidence 4678888 8 99999999999999999987543 233456788999999999999999999998763 3789
Q ss_pred EEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
+||||+ ++|.+++..... ......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||++.....
T Consensus 70 lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 146 (252)
T cd05084 70 IVMELVQGGDFLTFLRTEGP--RLKVKELIQMVENAAAGMEYLES-KHCIHRDLAARNCLVTEKNVLKISDFGMSREEED 146 (252)
T ss_pred EEEeeccCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-CCccccccchheEEEcCCCcEEECccccCccccc
Confidence 999999 479888875432 12334456679999999999996 8999999999999999999999999999876543
Q ss_pred CCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-------------h
Q 004157 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-------------R 247 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l-------------~ 247 (771)
....... .....+..|+|||.+.+. .++.++|+|||||++||+++ |..|+..... .
T Consensus 147 ~~~~~~~----~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 216 (252)
T cd05084 147 GVYASTG----GMKQIPVKWTAPEALNYG------RYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLP 216 (252)
T ss_pred ccccccC----CCCCCceeecCchhhcCC------CCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCC
Confidence 1100000 000122369999998663 46678999999999999997 7666632110 0
Q ss_pred ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 248 NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 248 ~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
....+|..+.+++.+||..+|.+||++.++++
T Consensus 217 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 217 CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 11345778999999999999999999999875
No 192
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.97 E-value=6.7e-30 Score=273.11 Aligned_cols=239 Identities=15% Similarity=0.197 Sum_probs=189.4
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
|++.+.||.|+ | +||.+.++.+++.|+||.+....... .....+.+|+.++++++||+|+.+++.+...
T Consensus 2 f~~~~~ig~G~~g--~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~------- 72 (285)
T cd05630 2 FRQYRVLGKGGFG--EVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETK------- 72 (285)
T ss_pred ceeeEEeecCCCe--EEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecC-------
Confidence 77888999998 8 99999999999999999998643322 2345567899999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.+++....... .....+..++.|++.||.|||+ .+++||||||+||+++.++..+|+|||++
T Consensus 73 -~~~~lv~e~~~g~~L~~~l~~~~~~~-l~~~~~~~~~~qi~~~l~~lH~-~~iiH~dikp~Nil~~~~~~~~l~Dfg~~ 149 (285)
T cd05630 73 -DALCLVLTLMNGGDLKFHIYHMGEAG-FEEGRAVFYAAEICCGLEDLHQ-ERIVYRDLKPENILLDDHGHIRISDLGLA 149 (285)
T ss_pred -CEEEEEEEecCCCcHHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHh-CCEEeCCCCHHHEEECCCCCEEEeeccce
Confidence 4899999999 47988886543221 2233456668999999999996 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-------hh--
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------LR-- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-------l~-- 247 (771)
........ .....+...|+|||++.+ ..++.++|+|||||++|+|++|..||.... ..
T Consensus 150 ~~~~~~~~-------~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~ 216 (285)
T cd05630 150 VHVPEGQT-------IKGRVGTVGYMAPEVVKN------ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL 216 (285)
T ss_pred eecCCCcc-------ccCCCCCccccChHHHcC------CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhh
Confidence 75532110 011234458999999875 356788999999999999999999886321 11
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCc
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQ 285 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||+.+|.+|++ +.++++| +||.
T Consensus 217 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h-~~~~ 265 (285)
T cd05630 217 VKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH-PLFK 265 (285)
T ss_pred hhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC-hhhh
Confidence 11346777899999999999999999 8899998 5553
No 193
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.97 E-value=5.2e-30 Score=267.90 Aligned_cols=239 Identities=19% Similarity=0.274 Sum_probs=189.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.++.|+ | .||+|.++.+|..|++|.+..........+.+++|++++++++||||+++++.++..
T Consensus 1 ~~~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~------- 71 (257)
T cd08225 1 RYEIIKKIGEGSFG--KIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQEN------- 71 (257)
T ss_pred CceEEEEecCCCcc--eEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccC-------
Confidence 589999999987 7 999999999999999999986533333456788999999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc-EEEEccCc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD-WKLHAFDV 175 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~-~KL~dFgl 175 (771)
..+|+|+||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++. +||+|||+
T Consensus 72 -~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~-~~i~H~dl~~~nil~~~~~~~~~l~d~~~ 148 (257)
T cd08225 72 -GRLFIVMEYCDGGDLMKRINRQRGV-LFSEDQILSWFVQISLGLKHIHD-RKILHRDIKSQNIFLSKNGMVAKLGDFGI 148 (257)
T ss_pred -CeEEEEEecCCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHH-CCcccccCCHHHEEEcCCCCeEEeccccc
Confidence 4899999999 4798888764321 12344466679999999999996 89999999999999998865 69999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+......... .....+...|+|||+..+ ..++.++|+|||||++|++++|..|+......
T Consensus 149 ~~~~~~~~~~------~~~~~~~~~~~ape~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 216 (257)
T cd08225 149 ARQLNDSMEL------AYTCVGTPYYLSPEICQN------RPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQ 216 (257)
T ss_pred chhccCCccc------ccccCCCccccCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc
Confidence 8766432110 111223457999998765 24667899999999999999999887543211
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++.+|+..+|++||++.+++.|+|
T Consensus 217 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~ 256 (257)
T cd08225 217 GYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPF 256 (257)
T ss_pred ccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCC
Confidence 11235677999999999999999999999999854
No 194
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.97 E-value=9.3e-30 Score=270.84 Aligned_cols=242 Identities=15% Similarity=0.214 Sum_probs=187.7
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|++.+.+|.|+ | .||+|.++.++..+++|.+.... ....+.+.+|+++++.++||||+++++.+..+
T Consensus 7 ~~i~~~lg~g~~g--~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~-------- 74 (282)
T cd06643 7 WEIIGELGDGAFG--KVYKAQNKETGVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDAFYYE-------- 74 (282)
T ss_pred HHHHhhcccCCCe--EEEEEEECCCCeEEEEEEeCCCC--HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC--------
Confidence 78889999987 7 99999999999999999997542 33456788899999999999999999998763
Q ss_pred cEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 100 ~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...|+|+||+ +.|..++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++.
T Consensus 75 ~~~~~v~e~~~~~~l~~~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~-~~i~H~dlkp~nili~~~~~~kl~dfg~~~ 151 (282)
T cd06643 75 NNLWILIEFCAGGAVDAVMLELER--PLTEPQIRVVCKQTLEALNYLHE-NKIIHRDLKAGNILFTLDGDIKLADFGVSA 151 (282)
T ss_pred CEEEEEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCcccEEEccCCCEEEccccccc
Confidence 4889999999 467777654321 12234456669999999999996 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----------- 246 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----------- 246 (771)
........ .........|++||++..... ....++.++|+|||||++|+|++|.+||.....
T Consensus 152 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~ 224 (282)
T cd06643 152 KNTRTIQR------RDSFIGTPYWMAPEVVMCETS-KDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE 224 (282)
T ss_pred cccccccc------cccccccccccCHhhccccCC-CCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcC
Confidence 65331110 111234458999999753210 013456789999999999999999988753211
Q ss_pred ----hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 ----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 ----~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.....+|..+.+++.+||+.+|.+||++.++++| +||.
T Consensus 225 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~-~~~~ 266 (282)
T cd06643 225 PPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH-PFVT 266 (282)
T ss_pred CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC-CCEe
Confidence 0112456789999999999999999999999998 4553
No 195
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.97 E-value=1.3e-29 Score=265.95 Aligned_cols=244 Identities=17% Similarity=0.258 Sum_probs=193.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|+ | .||.|++..++..|+||++............+.+|+.++++++||||+++++.+..
T Consensus 1 ~y~~~~~lg~G~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-------- 70 (264)
T cd06626 1 RWQRGNKIGGGTFG--KVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVH-------- 70 (264)
T ss_pred CceeeeEeecCCCc--EEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEec--------
Confidence 589999999997 7 99999999999999999998765544567889999999999999999999998775
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...+|+|+||+ ++|.+++...... ....+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||++
T Consensus 71 ~~~~~lv~e~~~~~~L~~~~~~~~~~---~~~~~~~i~~~i~~~l~~lh~-~~i~H~dl~~~nil~~~~~~~kl~d~g~~ 146 (264)
T cd06626 71 REKVYIFMEYCSGGTLEELLEHGRIL---DEHVIRVYTLQLLEGLAYLHS-HGIVHRDIKPANIFLDHNGVIKLGDFGCA 146 (264)
T ss_pred CCEEEEEEecCCCCcHHHHHhhcCCC---ChHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEcccccc
Confidence 34899999999 5799888765432 234456679999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--h--------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--L-------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~--l-------- 246 (771)
........... .. .........|+|||++.+.. ...+..++|+|+|||++|++++|..||...+ .
T Consensus 147 ~~~~~~~~~~~-~~-~~~~~~~~~~~~PE~~~~~~---~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~ 221 (264)
T cd06626 147 VKLKNNTTTMG-EE-VQSLAGTPAYMAPEVITGGK---GKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA 221 (264)
T ss_pred cccCCCCCccc-cc-ccCCcCCcCccChhhccCCC---CCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc
Confidence 87654321110 00 11123345899999987531 1236689999999999999999998875321 0
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 ------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.....++..+.+++.+||+.+|.+||++.+++.|+|
T Consensus 222 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~ 263 (264)
T cd06626 222 GHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPF 263 (264)
T ss_pred CCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCC
Confidence 011223667789999999999999999999999843
No 196
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=8.5e-30 Score=267.76 Aligned_cols=232 Identities=17% Similarity=0.252 Sum_probs=186.0
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
||.|. | .||.|+++.+++.|+||++.+.... ....+.+.+|+++++.++||||+++++.++.. ..+|+
T Consensus 1 lg~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~~~l 70 (262)
T cd05572 1 LGVGGFG--RVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDK--------KYIYM 70 (262)
T ss_pred CCCCCce--EEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcC--------CccEE
Confidence 46666 7 8999999999999999999865433 23456789999999999999999999998763 48999
Q ss_pred EecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCC
Q 004157 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (771)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~ 182 (771)
||||+ ++|.+++..... .....+.+++.||+.||.|||+ ++++|+||+|+||+++.+|.+||+|||++......
T Consensus 71 v~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~~i~~~l~~lH~-~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 71 LMEYCLGGELWTILRDRGL---FDEYTARFYIACVVLAFEYLHN-RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred EEecCCCCcHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc
Confidence 99998 579999877543 2344566779999999999996 99999999999999999999999999999876542
Q ss_pred CCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh------hh------cc-
Q 004157 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------LR------NT- 249 (771)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~------l~------~~- 249 (771)
. ..........|++||.+.+ ..++.++|+|+|||++|++++|..|+.... .. ..
T Consensus 147 ~-------~~~~~~~~~~~~~PE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 213 (262)
T cd05572 147 Q-------KTWTFCGTPEYVAPEIILN------KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKL 213 (262)
T ss_pred c-------ccccccCCcCccChhHhcC------CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCC
Confidence 1 1112233457999999765 356678999999999999999998875433 11 11
Q ss_pred ---CCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcc
Q 004157 250 ---ASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQN 286 (771)
Q Consensus 250 ---~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n 286 (771)
..++..+.+++.+||..+|.+|++ +.++++| +||++
T Consensus 214 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~-~~~~~ 257 (262)
T cd05572 214 EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH-KWFNG 257 (262)
T ss_pred CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcC-hhhhC
Confidence 234677899999999999999999 8999998 55654
No 197
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.97 E-value=3.2e-30 Score=271.03 Aligned_cols=238 Identities=17% Similarity=0.194 Sum_probs=191.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.||.|. | .||++.++.+++.|+||.+...... .....+.+|++++++++||||+++++.+..+
T Consensus 2 ~~~~~~~ig~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------- 71 (265)
T cd06605 2 DLEYLGELGAGNSG--VVSKVLHRPTGKIMAVKTIRLEINE-AIQKQILRELDILHKCNSPYIVGFYGAFYNN------- 71 (265)
T ss_pred cchHHHHhcCCCCe--EEEEEEEcCCCcEEEEEEEecccCh-HHHHHHHHHHHHHHHCCCCchhhhheeeecC-------
Confidence 488889999998 7 8999999999999999999875433 3456778899999999999999999999874
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+|+||+ .+|.+++.... .......+..++.||+.||.|||+..+++||||+|+||+++.+|.+||+|||.+
T Consensus 72 -~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~ 148 (265)
T cd06605 72 -GDISICMEYMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVS 148 (265)
T ss_pred -CEEEEEEEecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccc
Confidence 4899999999 47999887653 122344566779999999999995489999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh---------hh
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE---------LR 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~---------l~ 247 (771)
........ . .......|+|||...+ ..++.++|+|||||++|++++|..|+.... +.
T Consensus 149 ~~~~~~~~-------~-~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 214 (265)
T cd06605 149 GQLVNSLA-------K-TFVGTSSYMAPERIQG------NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQ 214 (265)
T ss_pred hhhHHHHh-------h-cccCChhccCHHHHcC------CCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHH
Confidence 76533110 0 1233457999999876 356788999999999999999998774321 11
Q ss_pred c-----c----C-CCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 N-----T----A-SIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ~-----~----~-~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
. . . .++..+.+++.+||..+|.+||++.+++.| +||+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~-~~~~ 261 (265)
T cd06605 215 YIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH-PFIK 261 (265)
T ss_pred HHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC-chhh
Confidence 0 0 1 156678999999999999999999999998 5554
No 198
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.97 E-value=3.4e-30 Score=281.66 Aligned_cols=247 Identities=14% Similarity=0.125 Sum_probs=189.2
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||+++++.+++.|+||++.+... .......+++|+.+++.++||||+++++.++.+
T Consensus 2 ~y~i~~~lG~G~fg--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~------ 73 (331)
T cd05624 2 DFEIIKVIGRGAFG--EVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDE------ 73 (331)
T ss_pred CceEEEEEeeCCCe--EEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC------
Confidence 599999999998 8 999999999999999999975321 223345678899999999999999999999864
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++||||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~Ey~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~~L~~lH~-~~iiHrDlkp~Nill~~~~~~kl~DfG~ 148 (331)
T cd05624 74 --NYLYLVMDYYVGGDLLTLLSKFED--RLPEDMARFYIAEMVLAIHSIHQ-LHYVHRDIKPDNVLLDMNGHIRLADFGS 148 (331)
T ss_pred --CEEEEEEeCCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCchHHEEEcCCCCEEEEeccc
Confidence 4899999999 579999976421 12234456668999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+........ .......++..|+|||++.+... ....++.++|+|||||++|+|++|..||......
T Consensus 149 a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~ 222 (331)
T cd05624 149 CLKMNQDGT-----VQSSVAVGTPDYISPEILQAMED-GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 222 (331)
T ss_pred eeeccCCCc-----eeeccccCCcccCCHHHHhcccc-CCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHc
Confidence 876643211 11111234558999999864210 0023567899999999999999999988543210
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCC--CCChHHHhhCCCCCcc
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSR--RLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~--Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||...+.+ |++++++++| .||.+
T Consensus 223 ~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h-~~f~~ 271 (331)
T cd05624 223 HEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH-AFFEG 271 (331)
T ss_pred CCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC-CCcCC
Confidence 11235677889999999865544 5689999988 66765
No 199
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.97 E-value=9.7e-30 Score=270.22 Aligned_cols=246 Identities=17% Similarity=0.208 Sum_probs=192.2
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+..+|++.+++|.|. | +||+|.++.++..|++|++... .....+.+.+|++++++++||||+++++.+...
T Consensus 3 ~~~~~~i~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 74 (280)
T cd06611 3 PNDIWEIIGELGDGAFG--KVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFYE---- 74 (280)
T ss_pred chhHHHHHHHhcCCCCc--eEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC----
Confidence 345699999999998 8 9999999989999999999754 233456788899999999999999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ +.|.+++..... ......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 75 ----~~~~lv~e~~~~~~L~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~-~~i~h~dl~p~nili~~~~~~~l~d~ 147 (280)
T cd06611 75 ----NKLWILIEFCDGGALDSIMLELER--GLTEPQIRYVCRQMLEALNFLHS-HKVIHRDLKAGNILLTLDGDVKLADF 147 (280)
T ss_pred ----CeEEEEeeccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChhhEEECCCCCEEEccC
Confidence 4889999999 478888876432 12344566779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------ 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------ 247 (771)
|++......... ......+..|++||++...... ...++.++|+|||||++|+|++|.+||......
T Consensus 148 g~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~~~~~-~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~ 220 (280)
T cd06611 148 GVSAKNKSTLQK------RDTFIGTPYWMAPEVVACETFK-DNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKI 220 (280)
T ss_pred ccchhhcccccc------cceeecchhhcCHHHHhhcccC-CCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHH
Confidence 987655332110 1122344579999997532100 123556899999999999999999888543211
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||..+|.+||++.++++| +||.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~-~~~~ 266 (280)
T cd06611 221 LKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH-PFVS 266 (280)
T ss_pred hcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC-hhhc
Confidence 112356678999999999999999999999998 4443
No 200
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=1.5e-29 Score=263.41 Aligned_cols=238 Identities=20% Similarity=0.327 Sum_probs=193.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.+|.|. | .||.|+++.+++.|+||.+......+.....+.+|++.+++++||||+++++++...
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (254)
T cd06627 1 NYQLGDLIGRGAFG--VVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS------- 71 (254)
T ss_pred CceeeeEEcccCCe--EEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC-------
Confidence 588999999997 7 999999999999999999987655445677899999999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+|||++ .+|.+++..... .....+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 72 -~~~~~v~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 146 (254)
T cd06627 72 -DSLYIILEYAENGSLRQIIKKFGP---FPESLVAVYVYQVLQGLAYLHE-QGVIHRDIKAANILTTKDGVVKLADFGVA 146 (254)
T ss_pred -CEEEEEEecCCCCcHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCHHHEEECCCCCEEEeccccc
Confidence 4899999999 479888876532 2345567779999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---------h
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------R 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------~ 247 (771)
......... .........|++||...+. .++.++|+|+||+++|++++|..++..... .
T Consensus 147 ~~~~~~~~~------~~~~~~~~~y~~pe~~~~~------~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 214 (254)
T cd06627 147 TKLNDVSKD------DASVVGTPYWMAPEVIEMS------GASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD 214 (254)
T ss_pred eecCCCccc------ccccccchhhcCHhhhcCC------CCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc
Confidence 877543211 1112234479999998652 466789999999999999999988743210 0
Q ss_pred ----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 248 ----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 248 ----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
....++..+.+++.+||..+|++||++.+++.+ +||
T Consensus 215 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~-~~~ 254 (254)
T cd06627 215 DHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH-PWI 254 (254)
T ss_pred CCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC-CCC
Confidence 113466789999999999999999999999988 443
No 201
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.97 E-value=1.5e-29 Score=265.84 Aligned_cols=237 Identities=18% Similarity=0.221 Sum_probs=188.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.+|.|+ | .||+|+.+.+|+.|+||.+...... ......+.+|++++++++||||+++++.+...
T Consensus 3 ~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~------ 74 (267)
T cd08224 3 NFKIEKKIGKGQFS--VVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN------ 74 (267)
T ss_pred ceeeeeeeccCCce--EEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC------
Confidence 699999999998 8 9999999999999999998753332 23466788999999999999999999999864
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCC-CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...|+||||+ ++|..++...... .......+..++.||+.||.|||+ .+++||||+|+||+++.+|.++|+|||
T Consensus 75 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 75 --NELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS-KRIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred --CeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh-CCEecCCcChhhEEECCCCcEEEeccc
Confidence 3789999999 4899888764321 112344466669999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh------h-
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------R- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------~- 247 (771)
++......... .........|+|||.+.+ ..++.++|+|||||++|+|++|..|+..... .
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 219 (267)
T cd08224 152 LGRFFSSKTTA------AHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK 219 (267)
T ss_pred eeeeccCCCcc------cceecCCccccCHHHhcc------CCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhh
Confidence 98765432110 111233457999998865 3567789999999999999999988743211 0
Q ss_pred ----cc-----CCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 248 ----NT-----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 248 ----~~-----~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.. ..++..+.+++.+||..+|.+||++.++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 220 IEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred hhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 01 145557899999999999999999998875
No 202
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.97 E-value=4e-30 Score=281.10 Aligned_cols=248 Identities=13% Similarity=0.122 Sum_probs=189.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.||.|+ | +||+++.+.+++.|+||++.+... .......+++|+.+++.++||+|+++++.++.+
T Consensus 2 ~y~~~~~lG~G~fg--~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------ 73 (332)
T cd05623 2 DFEILKVIGRGAFG--EVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDE------ 73 (332)
T ss_pred CceEEEEEEeCCCe--EEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecC------
Confidence 599999999998 8 999999999999999999975321 123345578899999999999999999999864
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|.+++.+... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~ey~~~g~L~~~l~~~~~--~l~~~~~~~~~~qi~~al~~lH~-~~iiHrDlkp~Nili~~~~~~kL~DfG~ 148 (332)
T cd05623 74 --NNLYLVMDYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVIAIDSVHQ-LHYVHRDIKPDNILMDMNGHIRLADFGS 148 (332)
T ss_pred --CEEEEEEeccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH-CCeEecCCCHHHEEECCCCCEEEeecch
Confidence 4899999999 579999976422 12334456669999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+........ .......++..|+|||++.+.-. ....++.++|+|||||++|||++|..||......
T Consensus 149 a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~-~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~ 222 (332)
T cd05623 149 CLKLMEDGT-----VQSSVAVGTPDYISPEILQAMED-GKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 222 (332)
T ss_pred heecccCCc-----ceecccccCccccCHHHHhcccc-CCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhC
Confidence 876543211 11112234568999999863100 0134667899999999999999999988543210
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCC--CCCChHHHhhCCCCCcch
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPS--RRLNSSKLIENSEYFQNK 287 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~--~Rps~~~lL~~~~fF~n~ 287 (771)
....+++.+.+++++||..++. .|+++.++++| +||.+.
T Consensus 223 ~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h-~~f~~~ 272 (332)
T cd05623 223 HKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH-PFFTGI 272 (332)
T ss_pred CCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC-CCcCCC
Confidence 0124577789999999865444 37899999998 677653
No 203
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.97 E-value=3.6e-30 Score=282.00 Aligned_cols=246 Identities=18% Similarity=0.281 Sum_probs=192.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|.+.+.+|.|+ | +||.|+++.+|+.|+||.+............+.+|+.+++.++||||+++++++......
T Consensus 4 ~~~y~~~~~lg~G~~~--~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~-- 79 (337)
T cd07858 4 DTKYVPIKPIGRGAYG--IVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHRE-- 79 (337)
T ss_pred ccceeEEEEeccCCCe--EEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheeccccc--
Confidence 35799999999998 8 999999999999999999876433333345677899999999999999999988653211
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
....+|+|+||+ ++|.++++.... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 80 -~~~~~~lv~e~~~~~L~~~~~~~~~---l~~~~~~~i~~qi~~aL~~LH~-~~i~H~dlkp~Nil~~~~~~~kL~Dfg~ 154 (337)
T cd07858 80 -AFNDVYIVYELMDTDLHQIIRSSQT---LSDDHCQYFLYQLLRGLKYIHS-ANVLHRDLKPSNLLLNANCDLKICDFGL 154 (337)
T ss_pred -ccCcEEEEEeCCCCCHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCCCEEECcCcc
Confidence 123689999999 578888875432 3345567779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------- 246 (771)
+........ ......++..|+|||.+... ..++.++|+|||||++|+|++|.++|...+.
T Consensus 155 ~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~ 223 (337)
T cd07858 155 ARTTSEKGD------FMTEYVVTRWYRAPELLLNC-----SEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITE 223 (337)
T ss_pred ccccCCCcc------cccccccccCccChHHHhcC-----CCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHH
Confidence 976643211 01122345589999987642 2466789999999999999999988743210
Q ss_pred ----------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 247 ----------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 247 ----------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
.....++..+.+++++||+.+|.+||++.++++| +||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h-~~~ 294 (337)
T cd07858 224 LLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH-PYL 294 (337)
T ss_pred HhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC-cch
Confidence 0013466778899999999999999999999999 444
No 204
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=5.9e-30 Score=279.15 Aligned_cols=248 Identities=16% Similarity=0.147 Sum_probs=185.0
Q ss_pred cCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEE
Q 004157 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
.+.||.|. +.-+||.+.++.+|+.|+||++......+...+.+++|+.+++.++||||+++++++... ..+
T Consensus 3 ~~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~--------~~~ 74 (328)
T cd08226 3 QVEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTG--------SWL 74 (328)
T ss_pred HHHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecC--------Cce
Confidence 34566664 222899999999999999999987655555668899999999999999999999999863 378
Q ss_pred EEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
|+|+||+ ++|.+++.+.... ......+..++.||+.||.|||+ ++++||||||+||+++.+|.+|++||+.+....
T Consensus 75 ~~v~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~qi~~aL~~lH~-~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~ 152 (328)
T cd08226 75 WVISPFMAYGSANSLLKTYFPE-GMSEALIGNILFGALRGLNYLHQ-NGYIHRNIKASHILISGDGLVSLSGLSHLYSLV 152 (328)
T ss_pred EEEEecccCCCHHHHHHhhccc-CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEeCCCcEEEechHHHhhhh
Confidence 9999999 4788888765322 23345566779999999999996 899999999999999999999999998765443
Q ss_pred CCCCCCCCCccccc-cccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----h-hc------
Q 004157 181 GNNEAANGPMLQYA-WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L-RN------ 248 (771)
Q Consensus 181 ~~~~~~~~~~~~~~-~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l-~~------ 248 (771)
.........+.... ......|++||++.+.. ..++.++|+|||||++|+|++|..||.... . ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~ 228 (328)
T cd08226 153 RNGQKAKVVYDFPQFSTSVLPWLSPELLRQDL----YGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPY 228 (328)
T ss_pred ccCccccccccccccccCccCccChhhhcCCC----CCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCC
Confidence 21111100000000 11234699999987532 235678999999999999999998875321 0 00
Q ss_pred ------------------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 249 ------------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 249 ------------------------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+..+.+++++||..+|.+||++.++++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 229 SPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred CCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 00123457889999999999999999999998
Q ss_pred CCCCcc
Q 004157 281 SEYFQN 286 (771)
Q Consensus 281 ~~fF~n 286 (771)
+||.+
T Consensus 309 -~~~~~ 313 (328)
T cd08226 309 -AFFKQ 313 (328)
T ss_pred -HHHHH
Confidence 45544
No 205
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.97 E-value=5.6e-30 Score=284.85 Aligned_cols=240 Identities=15% Similarity=0.152 Sum_probs=184.5
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEe
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEV 90 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~ 90 (771)
..+|++++.||.|+ | .||+|+++.. +..|+||++...... ...+.+.+|+++++.+ +||||+++++.+..
T Consensus 37 ~~~~~~~~~LG~G~fg--~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~ 113 (374)
T cd05106 37 RDNLQFGKTLGAGAFG--KVVEATAFGLGKEDNVLRVAVKMLKASAHT-DEREALMSELKILSHLGQHKNIVNLLGACTH 113 (374)
T ss_pred HHHceehheecCCCcc--cEEEEEEecCCcccccceeEEEeccCCCCH-HHHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence 34599999999998 8 8999986543 357999999765333 3456788999999999 89999999999876
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCC-----------------------------------------------
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGL----------------------------------------------- 121 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~----------------------------------------------- 121 (771)
. ..+|+||||| ++|.+++.....
T Consensus 114 ~--------~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (374)
T cd05106 114 G--------GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMR 185 (374)
T ss_pred C--------CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccC
Confidence 3 3789999999 679988865320
Q ss_pred --------------------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 122 --------------------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 122 --------------------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
........+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~-~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~ 264 (374)
T cd05106 186 PVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS-KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMN 264 (374)
T ss_pred CccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH-CCEEeccCchheEEEeCCCeEEEeeceeeeeccC
Confidence 0011233456779999999999996 8999999999999999999999999999976543
Q ss_pred CCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh--------------
Q 004157 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-------------- 246 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l-------------- 246 (771)
.... ........+..|+|||++.+ ..++.++|+|||||++|+|++ |..||.....
T Consensus 265 ~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~ 334 (374)
T cd05106 265 DSNY----VVKGNARLPVKWMAPESIFD------CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQM 334 (374)
T ss_pred Ccce----eeccCCCCccceeCHHHhcC------CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCc
Confidence 2110 00001122346999999865 356789999999999999997 8888743211
Q ss_pred hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 ~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+||+.+|.+||++.++++
T Consensus 335 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 335 SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 011246788999999999999999999999875
No 206
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.97 E-value=1.1e-29 Score=266.38 Aligned_cols=238 Identities=16% Similarity=0.219 Sum_probs=193.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.||.|+ | .||+|+++.+|+.|+||++...... .....+.+|++.+++++||||+++++.+...
T Consensus 2 ~~~~~~~i~~g~~~--~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (264)
T cd06623 2 DLERVKVLGQGSSG--VVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKE------- 71 (264)
T ss_pred cceeeeeeeecCCe--EEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccC-------
Confidence 588999999987 7 9999999999999999999875433 4467788999999999999999999999864
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...|+||||+ ++|.+++..... .....+..++.||+.||.|||+..+++||||+|+||+++.+|.++|+|||++
T Consensus 72 -~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~ 147 (264)
T cd06623 72 -GEISIVLEYMDGGSLADLLKKVGK---IPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGIS 147 (264)
T ss_pred -CeEEEEEEecCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccc
Confidence 4899999999 579999876532 2344566779999999999994389999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-------hh--
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------LR-- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-------l~-- 247 (771)
......... .........|+|||.... ..++.++|+|+||+++|+|++|..|+.... ..
T Consensus 148 ~~~~~~~~~------~~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~ 215 (264)
T cd06623 148 KVLENTLDQ------CNTFVGTVTYMSPERIQG------ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAI 215 (264)
T ss_pred eecccCCCc------ccceeecccccCHhhhCC------CCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHH
Confidence 876542211 011223457999999876 356778999999999999999998875442 00
Q ss_pred -------ccCC-CCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 248 -------NTAS-IPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 248 -------~~~~-IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
.... +|..+.+++++||+.+|+.||++.++++| +||
T Consensus 216 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~-~~~ 259 (264)
T cd06623 216 CDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH-PFI 259 (264)
T ss_pred hcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC-HHH
Confidence 0122 67789999999999999999999999998 444
No 207
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.97 E-value=9.3e-30 Score=271.89 Aligned_cols=240 Identities=15% Similarity=0.188 Sum_probs=189.1
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
|++.+.||.|+ | +||.|.+..+++.|+||++....... .....+.+|+++|++++||||+.+++.+..+
T Consensus 2 ~~~~~~lg~G~~g--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~------- 72 (285)
T cd05632 2 FRQYRVLGKGGFG--EVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETK------- 72 (285)
T ss_pred ceEEEEEecCCCe--EEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecC-------
Confidence 77888899998 8 99999999999999999997643222 2345577899999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|..++...... ......+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 73 -~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~-~~iiH~dikp~Nili~~~~~~kl~Dfg~~ 149 (285)
T cd05632 73 -DALCLVLTIMNGGDLKFHIYNMGNP-GFEEERALFYAAEILCGLEDLHR-ENTVYRDLKPENILLDDYGHIRISDLGLA 149 (285)
T ss_pred -CEEEEEEEeccCccHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHh-CCeeecCCCHHHEEECCCCCEEEecCCcc
Confidence 4899999999 4688777654321 12344566679999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------- 246 (771)
........ .....++..|+|||++.+ ..++.++|+|||||++|++++|..||.....
T Consensus 150 ~~~~~~~~-------~~~~~g~~~~~aPE~~~~------~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~ 216 (285)
T cd05632 150 VKIPEGES-------IRGRVGTVGYMAPEVLNN------QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRR 216 (285)
T ss_pred eecCCCCc-------ccCCCCCcCccChHHhcC------CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 76532110 112234568999999875 3567789999999999999999998853211
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcc
Q 004157 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQN 286 (771)
Q Consensus 247 ------~~~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n 286 (771)
.....++..+.+++.+||+.+|.+||+ +.+++.| .||++
T Consensus 217 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~-~~~~~ 266 (285)
T cd05632 217 VLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH-PFFRN 266 (285)
T ss_pred hhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC-hhhhc
Confidence 011346677889999999999999999 7788887 56654
No 208
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.97 E-value=8.4e-30 Score=270.50 Aligned_cols=242 Identities=21% Similarity=0.328 Sum_probs=190.0
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|++.+.+|.|+ | .||+|+++.+|+.|+||++......+.....+.+|+++++.++||||+++++.+.... +
T Consensus 1 y~~~~~l~~g~~~--~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------~ 72 (287)
T cd07840 1 YEKIAQIGEGTYG--QVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG------K 72 (287)
T ss_pred CeeeEEeccCCCe--EEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC------C
Confidence 78889999987 7 9999999999999999999876534444566788999999999999999999997642 1
Q ss_pred cEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 100 ITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 100 ~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
..+|+|+||+ ++|..++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||++..
T Consensus 73 ~~~~lv~e~~~~~l~~~~~~~~~--~~~~~~~~~i~~~i~~al~~LH~-~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~ 149 (287)
T cd07840 73 GSIYMVFEYMDHDLTGLLDSPEV--KFTESQIKCYMKQLLEGLQYLHS-NGILHRDIKGSNILINNDGVLKLADFGLARP 149 (287)
T ss_pred CcEEEEeccccccHHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHH-CCceeccCcHHHeEEcCCCCEEEccccceee
Confidence 4899999999 578777765421 23344566779999999999996 8999999999999999999999999999987
Q ss_pred cCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh------------
Q 004157 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------------ 246 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------------ 246 (771)
........ .........|+|||.+.+. ..++.++|+|+|||++|+|++|..++.....
T Consensus 150 ~~~~~~~~-----~~~~~~~~~y~~PE~~~~~-----~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~ 219 (287)
T cd07840 150 YTKRNSAD-----YTNRVITLWYRPPELLLGA-----TRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCG 219 (287)
T ss_pred ccCCCccc-----ccccccccccCCceeeEcc-----ccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 65432100 0111234479999987642 2456789999999999999999988743210
Q ss_pred -------h-----------------------ccCC-CCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 247 -------R-----------------------NTAS-IPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 247 -------~-----------------------~~~~-IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
. .... ++..+.+++++||+.+|.+||++.+++++.||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 220 SPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred CCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 0 0011 26778899999999999999999999998543
No 209
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.97 E-value=1.4e-29 Score=267.03 Aligned_cols=245 Identities=12% Similarity=0.119 Sum_probs=186.9
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
|++++.+|.|+ | .||.|+.+.++ ..|+||++............+.+|++.++.++||||+++++.+......
T Consensus 1 ~~~~~~lg~G~~g--~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~-- 76 (273)
T cd05035 1 LKLGKILGEGEFG--SVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSL-- 76 (273)
T ss_pred CccccccCcCCCc--eEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCcc--
Confidence 67899999998 8 99999987644 7899999986544445567789999999999999999999987653310
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCC---CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLE---GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~---~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
......|+|+||+ ++|..++...... .......+..++.|++.||.|||+ .+++||||||+||++++++.+||+
T Consensus 77 ~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~-~~i~H~dlkp~Nil~~~~~~~kl~ 155 (273)
T cd05035 77 QKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN-RNFIHRDLAARNCMLREDMTVCVA 155 (273)
T ss_pred ccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh-CCeeccccchheEEECCCCeEEEC
Confidence 0023579999999 5788888654321 123344566679999999999996 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL---- 246 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l---- 246 (771)
|||+++.......... ......+..|++||++.+ ..++.++|+|||||++|||++ |..|+.....
T Consensus 156 dfg~~~~~~~~~~~~~----~~~~~~~~~~~~pe~~~~------~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~ 225 (273)
T cd05035 156 DFGLSKKIYSGDYYRQ----GRIAKMPVKWIAIESLAD------RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIY 225 (273)
T ss_pred Cccceeeccccccccc----cccccCCccccCHhhccc------CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 9999886644211100 111122347999998765 356789999999999999998 7677643211
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ---------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....++..+.+++.+||+.+|.+||++.+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 226 DYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred HHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1123567789999999999999999999998764
No 210
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.97 E-value=6.6e-30 Score=271.43 Aligned_cols=239 Identities=17% Similarity=0.212 Sum_probs=190.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..|+..+++|.|. | .||.|+++.+++.|+||++..... ......+.+|++.+++++||||+++++.+...
T Consensus 4 ~~y~~~~~lg~g~~~--~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 74 (277)
T cd06640 4 ELFTKLERIGKGSFG--EVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG------ 74 (277)
T ss_pred HhhhhhhhcccCCCe--EEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC------
Confidence 3588889999998 8 999999999999999999986432 23467788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|.+++..... ....+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||+
T Consensus 75 --~~~~lv~e~~~~~~L~~~i~~~~l----~~~~~~~~~~~l~~~l~~lh~-~~ivH~dl~p~Nil~~~~~~~~l~dfg~ 147 (277)
T cd06640 75 --TKLWIIMEYLGGGSALDLLRAGPF----DEFQIATMLKEILKGLDYLHS-EKKIHRDIKAANVLLSEQGDVKLADFGV 147 (277)
T ss_pred --CEEEEEEecCCCCcHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHh-CCccCcCCChhhEEEcCCCCEEEccccc
Confidence 4899999999 478888875432 234466679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+......... .........|+|||++.+ ...+.++|+|||||++|||++|..|+......
T Consensus 148 ~~~~~~~~~~------~~~~~~~~~y~apE~~~~------~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 215 (277)
T cd06640 148 AGQLTDTQIK------RNTFVGTPFWMAPEVIQQ------SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK 215 (277)
T ss_pred ceeccCCccc------cccccCcccccCHhHhcc------CCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhc
Confidence 8766432110 111123347999999865 34667899999999999999999887532110
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....+|..+.+++.+||+.+|..||++.++++| .||.+
T Consensus 216 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~-~~~~~ 258 (277)
T cd06640 216 NNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH-KFIVK 258 (277)
T ss_pred CCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC-hHhhh
Confidence 112356678899999999999999999999998 45543
No 211
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=9e-30 Score=269.81 Aligned_cols=238 Identities=17% Similarity=0.294 Sum_probs=190.6
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|++.+.+|.|. | .||+|+...+++.|+||++......+...+.+.+|+.++++++||||++++++++..
T Consensus 1 y~~~~~ig~g~~~--~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-------- 70 (282)
T cd07829 1 YEKLEKLGEGTYG--VVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE-------- 70 (282)
T ss_pred CeeehcccccCcc--eEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC--------
Confidence 67788899988 8 899999999999999999987654444556778899999999999999999999863
Q ss_pred cEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 100 ITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 100 ~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
..+|+|||++ ++|.+++..... ......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||++..
T Consensus 71 ~~~~~v~e~~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~ 147 (282)
T cd07829 71 RKLYLVFEYCDMDLKKYLDKRPG--PLSPNLIKSIMYQLLRGLAYCHS-HRILHRDLKPQNILINRDGVLKLADFGLARA 147 (282)
T ss_pred CceEEEecCcCcCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChheEEEcCCCCEEEecCCcccc
Confidence 3899999999 679998887631 12344466679999999999996 8999999999999999999999999999877
Q ss_pred cCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh------------
Q 004157 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------------ 246 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------------ 246 (771)
....... .........|+|||.+.+. ..++.++|+|+|||++||+++|.++|.....
T Consensus 148 ~~~~~~~------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 216 (282)
T cd07829 148 FGIPLRT------YTHEVVTLWYRAPEILLGS-----KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILG 216 (282)
T ss_pred cCCCccc------cCccccCcCcCChHHhcCC-----cCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhC
Confidence 6442110 0111234479999998653 2566789999999999999999888753210
Q ss_pred -----------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 -----------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 -----------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.....++..+.+++.+||..+|++||++.+++.|+|
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~ 281 (282)
T cd07829 217 TPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPY 281 (282)
T ss_pred CCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcC
Confidence 011234667899999999999999999999999854
No 212
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.97 E-value=7.1e-30 Score=279.42 Aligned_cols=248 Identities=19% Similarity=0.299 Sum_probs=191.3
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~ 95 (771)
..+|++.+.||.|+ | .||+|.++.+|+.|+||++............+.+|+..++++ +||||+++++++...+
T Consensus 6 ~~~y~~~~~lg~g~~~--~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~--- 80 (337)
T cd07852 6 LRKYEILQKLGKGAYG--IVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEN--- 80 (337)
T ss_pred hhHHHHhHhhcCCCCe--eEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCC---
Confidence 45799999999998 8 899999998999999999875433333445677899999999 9999999999987543
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...+|+||||+ ++|..++..... ......+++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 81 ---~~~~~lv~e~~~~~L~~~~~~~~~----~~~~~~~i~~qi~~~L~~LH~-~~i~H~dl~p~nill~~~~~~kl~d~g 152 (337)
T cd07852 81 ---DKDIYLVFEYMETDLHAVIRANIL----EDVHKRYIMYQLLKALKYIHS-GNVIHRDLKPSNILLNSDCRVKLADFG 152 (337)
T ss_pred ---CceEEEEecccccCHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCCcEEEeecc
Confidence 34789999999 678888776422 233355669999999999996 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------- 246 (771)
++............+. .........|+|||++.+. ...+.++|+|||||++|+|++|.++|.....
T Consensus 153 ~~~~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~-----~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~ 226 (337)
T cd07852 153 LARSLSELEENPENPV-LTDYVATRWYRAPEILLGS-----TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKII 226 (337)
T ss_pred chhccccccccccCcc-hhcccccccccCceeeecc-----ccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 9986644221110011 1122344579999987542 3456789999999999999999987742110
Q ss_pred -----------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 -----------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 -----------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.....++..+.+++.+||+.+|.+||++.++++| .||+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~-~~~~ 299 (337)
T cd07852 227 EVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH-PYVA 299 (337)
T ss_pred HHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC-hhhh
Confidence 0012357778999999999999999999999998 4443
No 213
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.97 E-value=1.1e-29 Score=265.42 Aligned_cols=236 Identities=20% Similarity=0.271 Sum_probs=188.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc---hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ---DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~---~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+|+.++.||.|+ | +||+|+++.+++.|+||.+...... ....+.+.+|+..++.++||||+++++.++..
T Consensus 1 ~~~~~~~ig~g~~~--~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~---- 74 (258)
T cd06632 1 RWRKGELLGSGSFG--SVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREE---- 74 (258)
T ss_pred CccccceeeecCCc--eEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecC----
Confidence 488889999998 8 9999999999999999998764322 23566788999999999999999999998763
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+|+||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 75 ----~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~~~ni~~~~~~~~kl~d~ 146 (258)
T cd06632 75 ----DNLYIFLELVPGGSLAKLLKKYGS---FPEPVIRLYTRQILLGLEYLHD-RNTVHRDIKGANILVDTNGVVKLADF 146 (258)
T ss_pred ----CeEEEEEEecCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEccC
Confidence 4889999999 479988876542 2234456669999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++........ .........|++||..... ..++.++|+|||||++|++++|..||.....
T Consensus 147 ~~~~~~~~~~~-------~~~~~~~~~y~~pe~~~~~-----~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~ 214 (258)
T cd06632 147 GMAKQVVEFSF-------AKSFKGSPYWMAPEVIAQQ-----GGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKI 214 (258)
T ss_pred ccceecccccc-------ccccCCCcceeCHHHhcCC-----CCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHH
Confidence 99876543210 1112234479999997652 1267889999999999999999988743210
Q ss_pred ---hcc----CCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 247 ---RNT----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 247 ---~~~----~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
... ..++..+.+++.+||+.+|.+||++.+++.|+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~ 256 (258)
T cd06632 215 GRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHP 256 (258)
T ss_pred HhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCC
Confidence 011 23456788899999999999999999999984
No 214
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=1.1e-29 Score=270.60 Aligned_cols=241 Identities=17% Similarity=0.159 Sum_probs=193.5
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++.+.||.|. | +||++.+..+|+.|++|++.... .......+.+|+++++.++||||+++++.+...
T Consensus 4 ~~~~~~~~~ig~g~~g--~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 75 (284)
T cd06620 4 NEDLETISDLGAGNGG--SVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNE----- 75 (284)
T ss_pred HHHHHHHHHcCCCCCe--EEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecC-----
Confidence 45699999999998 7 99999999999999999987543 233466788999999999999999999999864
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|.+++...+. .....+..++.|++.+|.|||+..+++||||+|+||+++.++.++|+|||
T Consensus 76 ---~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~g 149 (284)
T cd06620 76 ---NNICMCMEFMDCGSLDRIYKKGGP---IPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFG 149 (284)
T ss_pred ---CEEEEEEecCCCCCHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCC
Confidence 4899999999 478888876432 23455667799999999999965689999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------- 246 (771)
++........ .....+..|+|||++.+ ..++.++|+|||||++|++++|..||.....
T Consensus 150 l~~~~~~~~~--------~~~~~~~~~~aPE~~~~------~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~ 215 (284)
T cd06620 150 VSGELINSIA--------DTFVGTSTYMSPERIQG------GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDP 215 (284)
T ss_pred cccchhhhcc--------CccccCcccCCHHHHcc------CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhh
Confidence 9865432110 01234458999999865 3566789999999999999999988753211
Q ss_pred -------hc----------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 -------RN----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 -------~~----------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.. ...+|..+.+++.+|+..+|.+||++.+++++.+|.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 216 MGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred hHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 00 01266778999999999999999999999998655543
No 215
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.97 E-value=8.3e-30 Score=273.52 Aligned_cols=239 Identities=17% Similarity=0.235 Sum_probs=191.1
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.+|.|. | +||+|.++.++..|+||.+..... ...+.+.+|+.+++.++||||+++++.+...
T Consensus 17 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~---- 88 (293)
T cd06647 17 PKKKYTRFEKIGQGASG--TVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNIVNYLDSYLVG---- 88 (293)
T ss_pred chhhceeeeEecCCCCe--EEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCCCCeeehhheeeeC----
Confidence 456899999999998 7 999999998999999999875322 2346678999999999999999999999863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...|+|+||+ ++|.+++.+... ....+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 89 ----~~~~lv~e~~~~~~L~~~~~~~~l----~~~~~~~i~~~l~~al~~LH~-~gi~H~dL~p~Nili~~~~~~kL~df 159 (293)
T cd06647 89 ----DELWVVMEYLAGGSLTDVVTETCM----DEGQIAAVCRECLQALEFLHS-NQVIHRDIKSDNILLGMDGSVKLTDF 159 (293)
T ss_pred ----CcEEEEEecCCCCcHHHHHhhcCC----CHHHHHHHHHHHHHHHHHHHh-CCEeeccCCHHHEEEcCCCCEEEccC
Confidence 3789999999 579888876533 233456779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h--
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R-- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~-- 247 (771)
|++......... .........|++||.+.. ..++.++|+|||||++|++++|..||..... .
T Consensus 160 g~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~ 227 (293)
T cd06647 160 GFCAQITPEQSK------RSTMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI 227 (293)
T ss_pred cceecccccccc------cccccCChhhcCchhhcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh
Confidence 998765432110 111223447999999865 3456789999999999999999988854321 0
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||..+|.+||++.+++.| .||+
T Consensus 228 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h-~~~~ 273 (293)
T cd06647 228 ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH-PFLK 273 (293)
T ss_pred hcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC-HHHh
Confidence 012345668899999999999999999999998 4553
No 216
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=1.4e-29 Score=276.44 Aligned_cols=238 Identities=18% Similarity=0.276 Sum_probs=190.0
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++.+.||.|. | .||+|.++.+|+.|+||++.+........+.+.+|+++++.++||||+++++++...
T Consensus 9 ~~~y~~~~~ig~g~~g--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~----- 81 (328)
T cd07856 9 TNRYVDLQPVGMGAFG--LVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP----- 81 (328)
T ss_pred ccceEEEEeecccCCe--EEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC-----
Confidence 45799999999998 8 999999999999999999876544444456778899999999999999999998753
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
....|+|+||+ +.|..+++.... ....+.+++.||++||.|||+ .+++||||+|.||+++.+|.+||+|||+
T Consensus 82 --~~~~~lv~e~~~~~L~~~~~~~~~----~~~~~~~~~~ql~~aL~~LH~-~~iiH~dl~p~Nili~~~~~~~l~dfg~ 154 (328)
T cd07856 82 --LEDIYFVTELLGTDLHRLLTSRPL----EKQFIQYFLYQILRGLKYVHS-AGVVHRDLKPSNILINENCDLKICDFGL 154 (328)
T ss_pred --CCcEEEEeehhccCHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEeECCCCCEEeCcccc
Confidence 23689999999 467777765432 234466779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------- 246 (771)
+....... ........|++||++.+. ..++.++|+|||||++|+|++|.++|.....
T Consensus 155 ~~~~~~~~---------~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~ 220 (328)
T cd07856 155 ARIQDPQM---------TGYVSTRYYRAPEIMLTW-----QKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITD 220 (328)
T ss_pred ccccCCCc---------CCCcccccccCceeeecc-----CCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 87543211 112334579999987542 3466889999999999999999988743210
Q ss_pred ----------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 247 ----------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 247 ----------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
.....++..+.+++++||..+|.+||++.+++.| +||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~-~~~ 291 (328)
T cd07856 221 LLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH-PYL 291 (328)
T ss_pred HhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC-Ccc
Confidence 0012356778999999999999999999999998 455
No 217
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.97 E-value=8.2e-30 Score=283.61 Aligned_cols=241 Identities=16% Similarity=0.194 Sum_probs=183.3
Q ss_pred CCCceecCCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEe
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEV 90 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~ 90 (771)
..+|++++.||.|+ | +||+|++ ..++..|+||++...... ...+.+.+|+++|+.+ +||||+++++++..
T Consensus 34 ~~~~~~~~~LG~G~fG--~V~~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~ 110 (375)
T cd05104 34 RNRLSFGKTLGAGAFG--KVVEATAYGLFKSDAAMTVAVKMLKPSAHL-TEREALMSELKVLSYLGNHINIVNLLGACTV 110 (375)
T ss_pred hHHeehhheecCCccc--eEEEEEEeccccCccceeEEEEeccCCcCc-HHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence 34699999999999 8 9999974 345678999998754322 3456788999999999 89999999999976
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCC----------------------------------------------
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLE---------------------------------------------- 122 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~---------------------------------------------- 122 (771)
. ...|+||||| ++|.+++......
T Consensus 111 ~--------~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 182 (375)
T cd05104 111 G--------GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTK 182 (375)
T ss_pred C--------CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccc
Confidence 3 3789999999 6898888653210
Q ss_pred --------------------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 123 --------------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 123 --------------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
.......+..+++||+.||.|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 261 (375)
T cd05104 183 ADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS-KNCIHRDLAARNILLTHGRITKICDFGLA 261 (375)
T ss_pred cccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH-CCeeccCCchhhEEEECCCcEEEecCccc
Confidence 001123345568999999999996 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh--------hh
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE--------LR 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~--------l~ 247 (771)
......... ........+..|+|||++.+ ..++.++|+|||||++|||++ |..||.... +.
T Consensus 262 ~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~ 331 (375)
T cd05104 262 RDIRNDSNY----VVKGNARLPVKWMAPESIFN------CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIK 331 (375)
T ss_pred eeccCcccc----cccCCCCCCcceeChhHhcC------CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHH
Confidence 866432110 00001122346999999876 356789999999999999998 666664311 01
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....|..+.+++.+||+.+|++||++.++++.
T Consensus 332 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 332 EGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred hCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 012356789999999999999999999998864
No 218
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=6.1e-30 Score=278.70 Aligned_cols=249 Identities=22% Similarity=0.324 Sum_probs=194.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.||.|+ | .||+|++..+|+.|+||++..........+.+.+|+.+++.++||||+++++++..... .+
T Consensus 1 ~y~i~~~ig~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~---~~ 75 (330)
T cd07834 1 RYELLKPIGSGAYG--VVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSP---ED 75 (330)
T ss_pred CceeeeeecCCCCe--EEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCc---cc
Confidence 599999999998 8 99999999899999999998654334456678899999999999999999999876421 11
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...+|+||||+ .+|.+++.... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.++|+|||++.
T Consensus 76 ~~~~~lv~e~~~~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~-~gi~H~dlkp~nili~~~~~~~L~dfg~~~ 151 (330)
T cd07834 76 FNDVYIVTELMETDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHS-ANVIHRDLKPSNILVNSNCDLKICDFGLAR 151 (330)
T ss_pred ccceEEEecchhhhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEcccCceE
Confidence 34789999999 46888876643 22344566679999999999996 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---------- 247 (771)
........ ............|+|||++.+. ..++.++|+|||||++|+|++|.++|......
T Consensus 152 ~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~ 223 (330)
T cd07834 152 GVDPDEDE---KGFLTEYVVTRWYRAPELLLSS-----SRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVL 223 (330)
T ss_pred eecccccc---cccccccccccCcCCceeeecc-----cCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhc
Confidence 76543210 0001122334579999998763 25678999999999999999999887432100
Q ss_pred ---------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ---------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ---------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....+|..+.+++.+||+.+|.+||++.+++.| +||++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~-~~~~~ 294 (330)
T cd07834 224 GTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH-PYLAQ 294 (330)
T ss_pred CCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC-ccHHh
Confidence 012356778899999999999999999999998 45543
No 219
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.97 E-value=1.9e-29 Score=268.01 Aligned_cols=242 Identities=18% Similarity=0.264 Sum_probs=186.4
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC---CCCCeeEEeeeEEecccCcC
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV---RHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L---rHPnIlkv~d~~e~e~~d~~ 96 (771)
|++.+.+|.|. | .||+|+++.+++.|+||++......+.....+.+|+..++++ +||||+++++++......
T Consensus 1 y~~~~~l~~g~~~--~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~-- 76 (287)
T cd07838 1 YEELAEIGEGAYG--TVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTD-- 76 (287)
T ss_pred CeEEEEecccCce--EEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCC--
Confidence 78889999998 8 999999998999999999986544443445566787777666 599999999999864421
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
....+|++||++ +.|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 77 -~~~~~~l~~e~~~~~l~~~l~~~~~~-~l~~~~~~~~~~~i~~al~~LH~-~~i~h~~l~~~nili~~~~~~~l~dfg~ 153 (287)
T cd07838 77 -RELKLTLVFEHVDQDLATYLSKCPKP-GLPPETIKDLMRQLLRGVDFLHS-HRIVHRDLKPQNILVTSDGQVKIADFGL 153 (287)
T ss_pred -CCceeEEEehhcccCHHHHHHHccCC-CCCHHHHHHHHHHHHHHHHHHHH-CCeeeccCChhhEEEccCCCEEEeccCc
Confidence 023599999999 5788888764321 22345567779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+........ .........|+|||++.+ ..++.++|+|||||++|+|++|.+++......
T Consensus 154 ~~~~~~~~~-------~~~~~~~~~~~~PE~~~~------~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~ 220 (287)
T cd07838 154 ARIYSFEMA-------LTSVVVTLWYRAPEVLLQ------SSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFD 220 (287)
T ss_pred ceeccCCcc-------cccccccccccChHHhcc------CCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHH
Confidence 877643211 011123457999999876 34667899999999999999998877532100
Q ss_pred -------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 -------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 -------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++++||+.+|.+||++.+++.|++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~ 286 (287)
T cd07838 221 VIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPY 286 (287)
T ss_pred HcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcC
Confidence 00124456778899999999999999999999854
No 220
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.97 E-value=5e-30 Score=272.18 Aligned_cols=233 Identities=17% Similarity=0.221 Sum_probs=187.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
-|++.+.||.|. | .||+|.+..++..|+||.+...... ...+.+.+|++++++++||||+++++.+...
T Consensus 5 ~y~~~~~l~~g~~~--~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 74 (277)
T cd06642 5 LFTKLERIGKGSFG--EVYKGIDNRTKEVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYITRYYGSYLKG------- 74 (277)
T ss_pred HHHHHHHhcCCCCe--eEEEEEEcCCCeEEEEEEeccccch-HHHHHHHHHHHHHHcCCCCccHhhhcccccC-------
Confidence 377888899987 7 9999999999999999998755333 3456789999999999999999999999863
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.+++.... .....+...+.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|||++
T Consensus 75 -~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~i~~~l~~lH~-~~ivH~dl~p~ni~i~~~~~~~l~dfg~~ 148 (277)
T cd06642 75 -TKLWIIMEYLGGGSALDLLKPGP----LEETYIATILREILKGLDYLHS-ERKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred -CceEEEEEccCCCcHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHhc-CCeeccCCChheEEEeCCCCEEEcccccc
Confidence 4899999999 46888876533 2344566779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------- 247 (771)
........ ..........|+|||++.+ ..++.++|+|||||++||+++|..|+......
T Consensus 149 ~~~~~~~~------~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 216 (277)
T cd06642 149 GQLTDTQI------KRNTFVGTPFWMAPEVIKQ------SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN 216 (277)
T ss_pred ccccCcch------hhhcccCcccccCHHHhCc------CCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC
Confidence 76543211 0111223447999999876 35667899999999999999999886432100
Q ss_pred ----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....++..+.+++.+|+..+|.+||++.++++|
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 217 SPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 012356678999999999999999999999998
No 221
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.97 E-value=1.7e-29 Score=272.43 Aligned_cols=245 Identities=16% Similarity=0.195 Sum_probs=188.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|++.+.++.|. | .||++.++.+++.|+||.+...... ......+.+|+++++.++||||+++++.++.+
T Consensus 2 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------ 73 (305)
T cd05609 2 DFETIKLISNGAYG--AVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETK------ 73 (305)
T ss_pred CceEeeEeecCCCe--eEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecC------
Confidence 589999999998 8 8999999999999999998865322 23456778899999999999999999998763
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++|+||||+ ++|.++++.... .....+..++.|++.||.|||+ .+++||||||+||+++.+|.+||+|||+
T Consensus 74 --~~~~lv~e~~~g~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~NIll~~~~~~~l~dfg~ 147 (305)
T cd05609 74 --RHLCMVMEYVEGGDCATLLKNIGA---LPVDMARMYFAETVLALEYLHN-YGIVHRDLKPDNLLITSMGHIKLTDFGL 147 (305)
T ss_pred --CEEEEEEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCccccCCchHHEEECCCCCEEEeeCCC
Confidence 4899999999 479999876542 2334455668999999999996 8999999999999999999999999998
Q ss_pred ccccCCCCCCC---------CCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh
Q 004157 176 LSEFDGNNEAA---------NGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (771)
Q Consensus 176 a~~~~~~~~~~---------~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l 246 (771)
+.......... ..............|+|||.+.+ ..++.++|+|||||++||+++|..||.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~vl~el~~g~~pf~~~~~ 221 (305)
T cd05609 148 SKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR------QGYGKPVDWWAMGIILYEFLVGCVPFFGDTP 221 (305)
T ss_pred ccccCcCccccccccccccchhhccccCCccCccccCchhccC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 76321110000 00000011223447999999765 3567889999999999999999988753221
Q ss_pred h---------------ccCCCCcchHHHHHHHhccCCCCCCC---hHHHhhCCCCCc
Q 004157 247 R---------------NTASIPKSLLPDYQRLLSSMPSRRLN---SSKLIENSEYFQ 285 (771)
Q Consensus 247 ~---------------~~~~IP~~l~~~i~~lL~~~P~~Rps---~~~lL~~~~fF~ 285 (771)
. ....+|..+.+++.+||+.+|.+||+ +.++++| +||.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~-~~~~ 277 (305)
T cd05609 222 EELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH-RFFL 277 (305)
T ss_pred HHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC-cccc
Confidence 1 01246777999999999999999998 6888888 5553
No 222
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.97 E-value=1.9e-29 Score=268.29 Aligned_cols=250 Identities=15% Similarity=0.212 Sum_probs=190.9
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d 94 (771)
+...|++.+.+|.|+ | +||+|.++.+++.|++|++.... .....+.+|+..++++ +||||+++++++......
T Consensus 14 ~~~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 88 (282)
T cd06636 14 PAGIFELVEVVGNGTYG--QVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPP 88 (282)
T ss_pred hhhhhhhheeeccCCCe--EEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhccccc
Confidence 345799999999997 6 99999999999999999987542 2335678899999998 699999999998542110
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
.....+|++|||+ ++|.+++...... ......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+|
T Consensus 89 --~~~~~~~iv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~-~~ivH~dl~~~nili~~~~~~~l~d 164 (282)
T cd06636 89 --GHDDQLWLVMEFCGAGSVTDLVKNTKGN-ALKEDWIAYICREILRGLAHLHA-HKVIHRDIKGQNVLLTENAEVKLVD 164 (282)
T ss_pred --CCCCEEEEEEEeCCCCcHHHHHHHccCC-CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEee
Confidence 1135899999999 4788888764321 23355567779999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-hh----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-LR---- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-l~---- 247 (771)
||++......... .....+...|+|||.+...-. ....++.++|+|||||++|+|++|..||.... ..
T Consensus 165 fg~~~~~~~~~~~------~~~~~~~~~y~aPE~l~~~~~-~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~ 237 (282)
T cd06636 165 FGVSAQLDRTVGR------RNTFIGTPYWMAPEVIACDEN-PDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL 237 (282)
T ss_pred CcchhhhhccccC------CCcccccccccCHhhcCcccC-cCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh
Confidence 9998765431110 111234458999998753210 11345678999999999999999998874321 11
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....+|..+.+++.+||+.+|.+||++.++++|+|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~ 281 (282)
T cd06636 238 IPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPF 281 (282)
T ss_pred HhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCC
Confidence 01246778999999999999999999999999844
No 223
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.97 E-value=1.4e-29 Score=268.45 Aligned_cols=241 Identities=16% Similarity=0.168 Sum_probs=186.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
...|++.+.+|.|+ | .||+|+.+. ++..|+||++...... ...+.+++|+++|++++||||++++++++..
T Consensus 4 ~~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 80 (280)
T cd05049 4 RDTIVLKRELGEGAFG--KVFLGECYHLEPENDKELVAVKTLKETASN-DARKDFEREAELLTNFQHENIVKFYGVCTEG 80 (280)
T ss_pred hHHhhHHhhccccCCc--eEeeeeeccccCcCCcceEEEEeecccCCH-HHHHHHHHHHHHHHhcCCCCchheeeEEecC
Confidence 34599999999998 8 899998753 3678999998754332 3456789999999999999999999999864
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCC-----------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCC
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGL-----------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~-----------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~ 158 (771)
...|+||||+ ++|.++|...+. ........+..++.||+.||.|||+ .+++||||||+
T Consensus 81 --------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~-~~i~h~dlkp~ 151 (280)
T cd05049 81 --------DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS-QHFVHRDLATR 151 (280)
T ss_pred --------CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh-CCeeccccccc
Confidence 3789999999 579999976532 1112233466679999999999996 89999999999
Q ss_pred CEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-C
Q 004157 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-G 237 (771)
Q Consensus 159 NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g 237 (771)
||+++.++.+||+|||++........... ......+..|+|||++.+ ..++.++|+|||||++|||++ |
T Consensus 152 nili~~~~~~kl~d~g~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~e~~~~g 221 (280)
T cd05049 152 NCLVGYDLVVKIGDFGMSRDVYTTDYYRV----GGHTMLPIRWMPPESIMY------RKFTTESDVWSFGVVLWEIFTYG 221 (280)
T ss_pred eEEEcCCCeEEECCcccceecccCcceec----CCCCcccceecChhhhcc------CCcchhhhHHHHHHHHHHHHhcC
Confidence 99999999999999999876533211000 011122357999999876 356788999999999999998 8
Q ss_pred CCCCChhhh-------h------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 238 MRLSKTEEL-------R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 238 ~~p~~~~~l-------~------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..||..... . ....+|..+.+++.+||..+|.+||++.++++.
T Consensus 222 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 277 (280)
T cd05049 222 KQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHER 277 (280)
T ss_pred CCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 877632111 0 113467789999999999999999999998763
No 224
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=2.9e-29 Score=268.01 Aligned_cols=242 Identities=17% Similarity=0.167 Sum_probs=189.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+++|.|. | .||.|.++.+++.|++|.+...... .....+.+|++++++++||||+++++++..+.
T Consensus 2 ~~~~~~~lg~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------ 72 (287)
T cd06621 2 KIVELSRLGEGAGG--SVTKCRLKNTGMIFALKTITTDPNP-DLQKQILRELEINKSCKSPYIVKYYGAFLDES------ 72 (287)
T ss_pred ceEEEEEeccCCce--EEEEEEECCCCeEEEEEEEecCCch-HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccC------
Confidence 588889999998 8 9999999999999999999864332 34567889999999999999999999986544
Q ss_pred ccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
...+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 73 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~-~~i~H~dl~~~nil~~~~~~~~l~dfg~ 151 (287)
T cd06621 73 SSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS-RKIIHRDIKPSNILLTRKGQVKLCDFGV 151 (287)
T ss_pred CCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEEecCCeEEEeeccc
Confidence 34789999999 478887765321 2223344567779999999999996 9999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------- 246 (771)
+........ ........|++||...+ ..++.++|+|+|||++|+|++|..|+.....
T Consensus 152 ~~~~~~~~~--------~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 217 (287)
T cd06621 152 SGELVNSLA--------GTFTGTSFYMAPERIQG------KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELL 217 (287)
T ss_pred ccccccccc--------ccccCCccccCHHHhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHH
Confidence 875543111 01123447999998865 3567789999999999999999988754310
Q ss_pred h---c-----c-------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 R---N-----T-------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 ~---~-----~-------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
. . + ...++.+.+++.+||..+|.+||++.++++|+ ||.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~-~~~~ 271 (287)
T cd06621 218 SYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHP-WIKA 271 (287)
T ss_pred HHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCc-cccc
Confidence 0 0 0 11234678999999999999999999999994 4444
No 225
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.97 E-value=3.8e-29 Score=258.96 Aligned_cols=234 Identities=17% Similarity=0.267 Sum_probs=189.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.+|.|. | .||++.++.+++.|++|++..... .....+.+|++.++.++||||+++++.+..+
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 69 (253)
T cd05122 1 LFEILEKIGKGGFG--EVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKK------- 69 (253)
T ss_pred CceeeeeeccCCce--EEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-------
Confidence 388899999987 7 999999999999999999986433 3456788999999999999999999999864
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...|+++||+ ++|.+++.... .......+.+++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 70 -~~~~l~~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~-~~i~h~dl~p~ni~i~~~~~~~l~d~~~~ 145 (253)
T cd05122 70 -DELWIVMEFCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHS-NGIIHRDIKAANILLTSDGEVKLIDFGLS 145 (253)
T ss_pred -CeEEEEEecCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhc-CCEecCCCCHHHEEEccCCeEEEeecccc
Confidence 3789999999 47888887653 122345577789999999999996 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh---------h
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------R 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------~ 247 (771)
........ .........|+|||...+. .++.++|+|+|||++|++++|..|+..... .
T Consensus 146 ~~~~~~~~-------~~~~~~~~~~~~PE~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 212 (253)
T cd05122 146 AQLSDTKA-------RNTMVGTPYWMAPEVINGK------PYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATN 212 (253)
T ss_pred cccccccc-------ccceecCCcccCHHHHcCC------CCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc
Confidence 77654211 1112234489999998763 466789999999999999999988754310 0
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
....++..+.+++.+||+.+|++||++.++++|+
T Consensus 213 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~ 252 (253)
T cd05122 213 GPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHP 252 (253)
T ss_pred CCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence 0112367789999999999999999999999984
No 226
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.97 E-value=1.6e-29 Score=266.21 Aligned_cols=238 Identities=18% Similarity=0.230 Sum_probs=187.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.||.|. | .||+|.++.+|+.|+||.+..... .......+.+|+++++.++||||+++++++..+
T Consensus 3 ~y~~~~~ig~g~~g--~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------ 74 (267)
T cd08229 3 NFRIEKKIGRGQFS--EVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED------ 74 (267)
T ss_pred hhhhhhhhcccCCe--EEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeC------
Confidence 589999999998 8 899999999999999998875432 223456788999999999999999999999863
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCC-CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLE-GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~-~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|++|||+ ++|.++++..... .......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.++|+|||
T Consensus 75 --~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~p~nili~~~~~~~l~dfg 151 (267)
T cd08229 75 --NELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS-RRVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred --CeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEEcCCCCEEECcch
Confidence 3889999999 4798888753321 222344456679999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh------hc
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------RN 248 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------~~ 248 (771)
++......... .........|+|||...+ ..++.++|+|||||++|+|++|..|+..... ..
T Consensus 152 ~~~~~~~~~~~------~~~~~~~~~~~ape~~~~------~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 219 (267)
T cd08229 152 LGRFFSSKTTA------AHSLVGTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK 219 (267)
T ss_pred hhhccccCCcc------cccccCCcCccCHHHhcC------CCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhh
Confidence 98765432110 111233457999999865 3566789999999999999999988743211 00
Q ss_pred ----------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 249 ----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 249 ----------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...++..+.+++.+|+..+|.+||++.++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~ 261 (267)
T cd08229 220 IEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDV 261 (267)
T ss_pred hhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHH
Confidence 12355678999999999999999999987753
No 227
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=1.6e-29 Score=277.63 Aligned_cols=244 Identities=15% Similarity=0.247 Sum_probs=191.4
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|++.+.||.|. | +||.|.++.+|..|+||++......+.....+.+|+++|+.++||||++++++++.+... .
T Consensus 15 ~~y~~~~~lg~G~~g--~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~ 90 (343)
T cd07880 15 DRYRDLKQVGSGAYG--TVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL--D 90 (343)
T ss_pred cceEEEEEeeecCCe--EEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc--c
Confidence 4699999999998 8 999999999999999999976544444456788999999999999999999998754311 0
Q ss_pred cccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+|+|||+++ +|..++.... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 91 ~~~~~~lv~e~~~~~l~~~~~~~~----l~~~~~~~i~~qi~~al~~LH~-~gi~H~dlkp~Nill~~~~~~kl~dfg~~ 165 (343)
T cd07880 91 RFHDFYLVMPFMGTDLGKLMKHEK----LSEDRIQFLVYQMLKGLKYIHA-AGIIHRDLKPGNLAVNEDCELKILDFGLA 165 (343)
T ss_pred ccceEEEEEecCCCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEeecccc
Confidence 0235799999994 6777776433 2345567779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h-----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~----- 247 (771)
....... ........|++||++.+. ..++.++|+|||||++|++++|.+||..... .
T Consensus 166 ~~~~~~~---------~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~ 231 (343)
T cd07880 166 RQTDSEM---------TGYVVTRWYRAPEVILNW-----MHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKV 231 (343)
T ss_pred cccccCc---------cccccCCcccCHHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 7654311 112234579999998642 2356789999999999999999988753210 0
Q ss_pred ----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+||++.+++.| +||+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~-~~~~~ 303 (343)
T cd07880 232 TGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH-PYFEE 303 (343)
T ss_pred cCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC-ccHhh
Confidence 002355668899999999999999999999988 55543
No 228
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=1.4e-29 Score=278.02 Aligned_cols=242 Identities=17% Similarity=0.267 Sum_probs=187.4
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+|.+.+.||.|+ | .||+|+++.+|+.|+||++.+....+.....+.+|+++++.++||||++++++++..... .
T Consensus 15 ~~y~~~~~ig~g~~g--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~--~ 90 (342)
T cd07879 15 ERYTSLKQVGSGAYG--SVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSG--D 90 (342)
T ss_pred cceEEEEEeeecCCe--EEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccC--C
Confidence 5799999999987 7 999999999999999999976544444455678899999999999999999998753210 0
Q ss_pred cccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....+|+|+||+. .|..++. .. .....+.+++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 91 ~~~~~~lv~e~~~~~l~~~~~-~~----~~~~~~~~~~~qi~~aL~~LH~-~~i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 91 EFQDFYLVMPYMQTDLQKIMG-HP----LSEDKVQYLVYQMLCGLKYIHS-AGIIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred CCceEEEEecccccCHHHHHc-CC----CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 1236799999994 4554432 11 2345577789999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh---------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR--------- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~--------- 247 (771)
....... ........|+|||++.+. ..++.++|+|||||++|||++|..+|......
T Consensus 165 ~~~~~~~---------~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~ 230 (342)
T cd07879 165 RHADAEM---------TGYVVTRWYRAPEVILNW-----MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 230 (342)
T ss_pred cCCCCCC---------CCceeeecccChhhhcCc-----cccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 7653211 112334579999997652 24567899999999999999999887542200
Q ss_pred ----------------------c------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ----------------------N------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ----------------------~------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
. ...++..+.+++.+||+.+|.+||++.+++.| +||.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h-~~f~ 301 (342)
T cd07879 231 TGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH-PYFD 301 (342)
T ss_pred cCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC-cchh
Confidence 0 01345568899999999999999999999998 4553
No 229
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.97 E-value=2.5e-29 Score=267.65 Aligned_cols=240 Identities=17% Similarity=0.224 Sum_probs=184.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEE----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTS----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~----k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
..|++.+.||.|+ | +||+|+. ..++..|+||.+..... ......+.+|+.++++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-- 79 (283)
T cd05090 5 SAVRFMEELGECAFG--KIYKGHLYLPGMDHAQLVAIKTLKDINN-PQQWGEFQQEASLMAELHHPNIVCLLGVVTQE-- 79 (283)
T ss_pred hhceeeeeccccCCc--ceEEEEEecCCCCCcceEEEEeccCCCC-HHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC--
Confidence 3588999999998 8 8999985 34567899999875433 23456788999999999999999999998763
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCC--------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCC
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLE--------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~--------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp 157 (771)
...|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||
T Consensus 80 ------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlkp 152 (283)
T cd05090 80 ------QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS-HFFVHKDLAA 152 (283)
T ss_pred ------CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh-cCeehhcccc
Confidence 3789999999 5799888643210 111233455679999999999996 8999999999
Q ss_pred CCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-
Q 004157 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS- 236 (771)
Q Consensus 158 ~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~- 236 (771)
+||+++.++.+||+|||+++......... .......+..|+|||++.+ ..++.++|+|||||++|||++
T Consensus 153 ~nili~~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~~ 222 (283)
T cd05090 153 RNILIGEQLHVKISDLGLSREIYSADYYR----VQPKSLLPIRWMPPEAIMY------GKFSSDSDIWSFGVVLWEIFSF 222 (283)
T ss_pred ceEEEcCCCcEEeccccccccccCCccee----cccCCCccceecChHHhcc------CCCCchhhhHHHHHHHHHHHcC
Confidence 99999999999999999998764321100 0111222346999999865 346779999999999999998
Q ss_pred CCCCCChhh---h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 237 GMRLSKTEE---L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 237 g~~p~~~~~---l----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
|..||.... . .....+|..+.+++.+|++.+|.+||++.+++++
T Consensus 223 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 223 GLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 777764311 0 1123467789999999999999999999998765
No 230
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.97 E-value=2.9e-29 Score=261.84 Aligned_cols=234 Identities=18% Similarity=0.225 Sum_probs=185.6
Q ss_pred CCCCCCC-CceEEEEeEECCC---CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCccc
Q 004157 25 DPYPSAW-GSWSHFQGTSKDD---GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~---g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
+.||.|+ | .||+|.+... +..|+||++....... ....+.+|++.++.++||||+++++++... .
T Consensus 1 ~~ig~g~~g--~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--------~ 69 (262)
T cd00192 1 KKLGEGAFG--EVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTEE--------E 69 (262)
T ss_pred CccccCCce--EEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecCC--------C
Confidence 3578887 7 9999999876 8999999998654433 467888999999999999999999999863 4
Q ss_pred EEEEEecCC--cchHHHHHHhCC------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 101 TIYIVTEPV--MPLSEKIKELGL------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 101 ~iyIVtE~v--~~L~~~L~~~~~------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
.+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|
T Consensus 70 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~-~~i~H~di~p~nili~~~~~~~l~d 148 (262)
T cd00192 70 PLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS-KKFVHRDLAARNCLVGEDLVVKISD 148 (262)
T ss_pred ceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc-CCcccCccCcceEEECCCCcEEEcc
Confidence 899999999 579999887521 1223455567779999999999996 9999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----- 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----- 246 (771)
||.+......... ...........|+|||..... .++.++|+|||||++|+|++ |..|+.....
T Consensus 149 fg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~ 218 (262)
T cd00192 149 FGLSRDVYDDDYY----RKKTGGKLPIRWMAPESLKDG------IFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLE 218 (262)
T ss_pred ccccccccccccc----ccccCCCcCccccCHHHhccC------CcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 9999876543210 001112234579999988763 56788999999999999998 4777643211
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||..+|.+||++.+++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 219 YLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred HHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 1124567889999999999999999999999865
No 231
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.97 E-value=1.7e-29 Score=269.46 Aligned_cols=244 Identities=17% Similarity=0.159 Sum_probs=185.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~ 97 (771)
.|+..+.||.|+ | .||+++++.+|+.|+||.+...... .....+.+|+..+.++. ||||+++++++..+
T Consensus 5 ~~~~~~~lg~G~~g--~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~------ 75 (288)
T cd06616 5 DLKDLGEIGRGAFG--TVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE------ 75 (288)
T ss_pred HhHHHHHhCCCCce--EEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC------
Confidence 467778899987 7 9999999999999999999864333 34556788999999997 99999999998764
Q ss_pred cccEEEEEecCC-cchHHHHHHh--CCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 98 TKITIYIVTEPV-MPLSEKIKEL--GLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~--~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...|++||++ .+|.++.... ..........+..++.|++.||.|||+..+++||||||+||+++.+|.+||+|||
T Consensus 76 --~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg 153 (288)
T cd06616 76 --GDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFG 153 (288)
T ss_pred --CcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecc
Confidence 3679999999 4554433221 0112233445677799999999999975799999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----hhcc
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----LRNT 249 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-----l~~~ 249 (771)
++........ .....+...|+|||++.+.- ...++.++|+|||||++|++++|..||.... +...
T Consensus 154 ~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~---~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~ 223 (288)
T cd06616 154 ISGQLVDSIA-------KTRDAGCRPYMAPERIDPSA---RDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQV 223 (288)
T ss_pred hhHHhccCCc-------cccccCccCccCHHHhcccc---ccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhh
Confidence 9876543211 11112345799999986521 1246678999999999999999998875321 1110
Q ss_pred -------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 250 -------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 250 -------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
..++..+.+++.+||+.+|.+||++.+++.| +||+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~-~~~~ 271 (288)
T cd06616 224 VKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH-PFIK 271 (288)
T ss_pred cCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC-hhhh
Confidence 1356678999999999999999999999998 4553
No 232
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.97 E-value=1.4e-29 Score=272.39 Aligned_cols=242 Identities=18% Similarity=0.232 Sum_probs=191.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..-|+....||.|+ | .||.|.++.+++.|+||++..+... ..+.+.+|+.+++.++||||+++++.+..+
T Consensus 20 ~~~~~~~~~ig~g~~g--~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~----- 90 (297)
T cd06659 20 RSLLENYIKIGEGSTG--IVCIAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHQNVVEMYKSYLVG----- 90 (297)
T ss_pred hhhHHhhhhcCCCCce--eEEEEEEcCCCCEEEEEEEEecccc--hHHHHHHHHHHHHhCCCCchhhhhhheeeC-----
Confidence 34577777899988 8 8999999999999999999764332 345678999999999999999999998863
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+|+||+ ++|..++....+ ....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 91 ---~~~~iv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~qi~~~L~~LH~-~~ivH~dl~p~Nill~~~~~~kL~dfg 162 (297)
T cd06659 91 ---EELWVLMEFLQGGALTDIVSQTRL----NEEQIATVCESVLQALCYLHS-QGVIHRDIKSDSILLTLDGRVKLSDFG 162 (297)
T ss_pred ---CeEEEEEecCCCCCHHHHHhhcCC----CHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHeEEccCCcEEEeech
Confidence 4899999999 468887765432 344567779999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh---------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--------- 245 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~--------- 245 (771)
++......... .........|+|||++.+ ..++.++|+|||||++|||++|..||....
T Consensus 163 ~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~ 230 (297)
T cd06659 163 FCAQISKDVPK------RKSLVGTPYWMAPEVISR------TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR 230 (297)
T ss_pred hHhhccccccc------ccceecCccccCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Confidence 98755432110 111233458999999875 356778999999999999999998874321
Q ss_pred ------hhccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchh
Q 004157 246 ------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKL 288 (771)
Q Consensus 246 ------l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~l 288 (771)
......++..+.+++.+||..+|.+||++.++++|++|.+-.+
T Consensus 231 ~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 231 DSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred ccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 1112356778899999999999999999999999854444433
No 233
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=1.4e-29 Score=268.52 Aligned_cols=238 Identities=21% Similarity=0.286 Sum_probs=189.4
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|++.+.|+.|. | .||+|.++.+|+.++||.+............+.+|++.|+.++||||+++++.+...
T Consensus 1 y~~~~~i~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-------- 70 (283)
T cd05118 1 YQKLGKIGEGTYG--VVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHK-------- 70 (283)
T ss_pred CccceeeecCCCc--eEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccC--------
Confidence 67788899987 7 999999999999999999987654444566788899999999999999999998763
Q ss_pred cEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 100 ITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 100 ~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
..+|+|+||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++..
T Consensus 71 ~~~~~v~e~~~~~l~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dl~p~nili~~~~~~~l~df~~~~~ 147 (283)
T cd05118 71 GDLYLVFEFMDTDLYKLIKDRQR--GLPESLIKSYLYQLLQGLAFCHS-HGILHRDLKPENLLINTEGVLKLADFGLARS 147 (283)
T ss_pred CCEEEEEeccCCCHHHHHHhhcc--cCCHHHHHHHHHHHHHHHHHHHH-CCeeecCcCHHHEEECCCCcEEEeeeeeeEe
Confidence 4899999999 578777766431 22344466679999999999996 8999999999999999999999999999877
Q ss_pred cCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh------------
Q 004157 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------------ 246 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------------ 246 (771)
...... . .........|++||.+.+. ..++.++|+|||||++|+|++|..+|.....
T Consensus 148 ~~~~~~----~--~~~~~~~~~~~~PE~~~~~-----~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~ 216 (283)
T cd05118 148 FGSPVR----P--YTHYVVTRWYRAPELLLGD-----KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLG 216 (283)
T ss_pred cCCCcc----c--ccCccCcccccCcHHHhcC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC
Confidence 654320 0 0112233479999998652 3567899999999999999999987743110
Q ss_pred -------hc-----------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 -------RN-----------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 -------~~-----------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.. ...++..+.+++.+||+.+|.+||++.+++.|++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~ 282 (283)
T cd05118 217 TPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPY 282 (283)
T ss_pred CCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCC
Confidence 00 1135667889999999999999999999999854
No 234
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.97 E-value=1.3e-29 Score=266.01 Aligned_cols=236 Identities=17% Similarity=0.231 Sum_probs=186.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|++++.||.|+ | +||+|+++. +..|++|++..... .....+.+|+..++.++||||+++++++...
T Consensus 5 ~~~y~~~~~ig~g~~~--~vy~~~~~~-~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 74 (261)
T cd05148 5 REEFTLERKLGSGYFG--EVWEGLWKN-RVRVAIKILKSDDL--LKQQDFQKEVQALKRLRHKHLISLFAVCSVG----- 74 (261)
T ss_pred HHHHHHhhhhccCCCc--cEEEeEecC-CCcEEEEeccccch--hhHHHHHHHHHHHhcCCCcchhheeeeEecC-----
Confidence 34699999999998 8 999999987 99999999876432 2345688899999999999999999998763
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+||||+ ++|.+++..... .......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||
T Consensus 75 ---~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~-~~i~h~dl~~~nilv~~~~~~kl~d~g 149 (261)
T cd05148 75 ---EPVYIITELMEKGSLLAFLRSPEG-QVLPVASLIDMACQVAEGMAYLEE-QNSIHRDLAARNILVGEDLVCKVADFG 149 (261)
T ss_pred ---CCeEEEEeecccCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHH-CCeeccccCcceEEEcCCceEEEcccc
Confidence 3789999999 489999976432 122344455668999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----h--
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----R-- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----~-- 247 (771)
++........ .......+..|++||.... ..++.++|+|||||++|++++ |..|+..... .
T Consensus 150 ~~~~~~~~~~------~~~~~~~~~~~~~PE~~~~------~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~ 217 (261)
T cd05148 150 LARLIKEDVY------LSSDKKIPYKWTAPEAASH------GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQI 217 (261)
T ss_pred chhhcCCccc------cccCCCCceEecCHHHHcc------CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH
Confidence 9976643211 0111223347999998765 356678999999999999998 6777643211 1
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~ 257 (261)
T cd05148 218 TAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREE 257 (261)
T ss_pred HhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 113567789999999999999999999998753
No 235
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.97 E-value=2.9e-29 Score=262.96 Aligned_cols=231 Identities=18% Similarity=0.230 Sum_probs=182.5
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.-.|++.+.+|.|+ | .||+|..+ |..|++|.+... ...+.+.+|+.++++++||||+++++++..+
T Consensus 5 ~~~~~~~~~lg~g~~~--~v~~~~~~--~~~~~~k~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 71 (256)
T cd05082 5 MKELKLLQTIGKGEFG--DVMLGDYR--GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE----- 71 (256)
T ss_pred HHhCeeeeeecccCCC--eEEEEEEc--CCcEEEEEeCCC----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcC-----
Confidence 34699999999998 8 89999765 889999998643 2245688999999999999999999976543
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...+|+|+||+ ++|.++++...... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 72 --~~~~~lv~e~~~~~~L~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nil~~~~~~~kl~dfg 147 (256)
T cd05082 72 --KGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEA-NNFVHRDLAARNVLVSEDNVAKVSDFG 147 (256)
T ss_pred --CCceEEEEECCCCCcHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHh-CCEeccccchheEEEcCCCcEEecCCc
Confidence 24789999999 58999987654321 2334456678999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhhc-----
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELRN----- 248 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~~----- 248 (771)
++........ ....+..|+|||+..+ ..++.++|+|||||++|+|++ |..|+.......
T Consensus 148 ~~~~~~~~~~---------~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~ 212 (256)
T cd05082 148 LTKEASSTQD---------TGKLPVKWTAPEALRE------KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV 212 (256)
T ss_pred cceeccccCC---------CCccceeecCHHHHcc------CCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 9876543211 1112347999999865 356778999999999999997 777765432211
Q ss_pred --------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 249 --------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 249 --------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...+|..+.+++.+|++.+|.+||++.++++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 252 (256)
T cd05082 213 EKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQ 252 (256)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 13467889999999999999999999998753
No 236
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=1.5e-29 Score=267.54 Aligned_cols=243 Identities=18% Similarity=0.280 Sum_probs=192.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~ 96 (771)
+|++.+.||.|+ | .||+|+.+.+|+.|+||++.++.. .......+.+|++.+++++ ||||++++++++..
T Consensus 2 ~y~~~~~lg~g~~~--~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~----- 74 (280)
T cd05581 2 DFKFGKIIGEGSFS--TVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDE----- 74 (280)
T ss_pred CceEeeeecCCCce--EEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCC-----
Confidence 599999999997 7 999999999999999999986432 2334567888999999999 99999999998763
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+|+|||++ ++|.+++..... .....+.+++.||+.||.|||+ .+++|+||+|+||+++.+|.++|+|||
T Consensus 75 ---~~~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~i~~ql~~~l~~Lh~-~~~~H~dl~~~ni~i~~~~~~~l~df~ 147 (280)
T cd05581 75 ---ENLYFVLEYAPNGELLQYIRKYGS---LDEKCTRFYAAEILLALEYLHS-KGIIHRDLKPENILLDKDMHIKITDFG 147 (280)
T ss_pred ---ceEEEEEcCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeeecCCCHHHeEECCCCCEEecCCc
Confidence 4899999999 579998887642 2344567779999999999996 999999999999999999999999999
Q ss_pred cccccCCCCCCCCC--------------CccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCC
Q 004157 175 VLSEFDGNNEAANG--------------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240 (771)
Q Consensus 175 la~~~~~~~~~~~~--------------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p 240 (771)
++............ .........+..|++||+... ..++.++|+|+|||++|++++|..|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~------~~~~~~~Di~slG~~l~~l~~g~~p 221 (280)
T cd05581 148 TAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE------KPAGKSSDLWALGCIIYQMLTGKPP 221 (280)
T ss_pred cccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCC------CCCChhhhHHHHHHHHHHHHhCCCC
Confidence 98866543211000 001111233458999998775 3466789999999999999999988
Q ss_pred CChhhh------------hccCCCCcchHHHHHHHhccCCCCCCCh----HHHhhCCC
Q 004157 241 SKTEEL------------RNTASIPKSLLPDYQRLLSSMPSRRLNS----SKLIENSE 282 (771)
Q Consensus 241 ~~~~~l------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~----~~lL~~~~ 282 (771)
+..... .....+|+.+.+++++||+.+|.+||++ .++++|++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~ 279 (280)
T cd05581 222 FRGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279 (280)
T ss_pred CCCccHHHHHHHHHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCC
Confidence 754321 0113467788999999999999999999 99999843
No 237
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.97 E-value=4e-30 Score=271.01 Aligned_cols=235 Identities=20% Similarity=0.276 Sum_probs=175.8
Q ss_pred eecCCCCCCC-CceEEEEeEEC----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 22 NIGDPYPSAW-GSWSHFQGTSK----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 22 ~i~e~ig~G~-g~wtVy~g~~k----~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
++.+.||.|. | .||+|+.+ ..+..|+||.+... ......+.+.+|++.+++++||||+++++++...
T Consensus 2 ~~~~~ig~G~fg--~v~~~~~~~~~~~~~~~V~vk~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~----- 73 (259)
T PF07714_consen 2 KLIKQIGEGSFG--KVYRAEWKQKDNDKNQPVAVKILKPS-SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIEN----- 73 (259)
T ss_dssp EEEEEEEEESSE--EEEEEEEESTTTSSEEEEEEEEESTT-SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESS-----
T ss_pred EEeeEEccCCCc--EEEEEEEEcccCCCCEEEEEEEeccc-cccccceeeeeccccccccccccccccccccccc-----
Confidence 4667899998 8 99999998 34578999999543 3334467889999999999999999999999842
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
..+++||||| ++|.++|....... .....+..++.||+.||.|||+ .+++||||++.|||++.++.+||+|||
T Consensus 74 ---~~~~lv~e~~~~g~L~~~L~~~~~~~-~~~~~~~~i~~~i~~~l~~Lh~-~~iiH~~l~~~nill~~~~~~Kl~~f~ 148 (259)
T PF07714_consen 74 ---EPLFLVMEYCPGGSLDDYLKSKNKEP-LSEQQRLSIAIQIAEALSYLHS-NNIIHGNLSPSNILLDSNGQVKLSDFG 148 (259)
T ss_dssp ---SSEEEEEE--TTEBHHHHHHHTCTTT-SBHHHHHHHHHHHHHHHHHHHH-TTEEEST-SGGGEEEETTTEEEEESTT
T ss_pred ---cccccccccccccccccccccccccc-cccccccccccccccccccccc-ccccccccccccccccccccccccccc
Confidence 3589999999 58999999872211 2334456669999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh--------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE-------- 245 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~-------- 245 (771)
++......... ...........|+|||.+.+. .++.++||||||+++||+++ |..++....
T Consensus 149 ~~~~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~------~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~ 218 (259)
T PF07714_consen 149 LSRPISEKSKY----KNDSSQQLPLRYLAPEVLKDG------EYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL 218 (259)
T ss_dssp TGEETTTSSSE----EESTTSESGGGGS-HHHHHHS------EESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH
T ss_pred ccccccccccc----ccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccc
Confidence 99877321110 011112234489999998764 36789999999999999999 556664311
Q ss_pred -----hhccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 246 -----LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 246 -----l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
......+|..+.+++.+|++.+|.+||++.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 219 KQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred cccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1112456788999999999999999999999875
No 238
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.97 E-value=3.7e-29 Score=264.20 Aligned_cols=245 Identities=11% Similarity=0.134 Sum_probs=184.8
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCC--cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGS--PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~--~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
|.+++.||.|+ | .||+|+.+.++. .|+||.+..........+.+.+|++.++.++||||+++++.+...... .
T Consensus 1 ~~i~~~ig~G~~g--~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~ 76 (272)
T cd05075 1 LALGKTLGEGEFG--SVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVES--E 76 (272)
T ss_pred CccccccCcccCc--eEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcc--c
Confidence 46789999998 8 999999987775 699999876554555567888999999999999999999876432211 0
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCC---CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLE---GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~---~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
.....++||||+ ++|..++...... .......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|
T Consensus 77 ~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~kl~D 155 (272)
T cd05075 77 GYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS-KSFIHRDLAARNCMLNENMNVCVAD 155 (272)
T ss_pred CCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhheEEcCCCCEEECC
Confidence 023579999999 5788877543221 112344456669999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----- 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----- 246 (771)
||++........... ......+..|++||+..+ ..++.++|+|||||++|++++ |..||.....
T Consensus 156 fg~~~~~~~~~~~~~----~~~~~~~~~~~~pe~~~~------~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 225 (272)
T cd05075 156 FGLSKKIYNGDYYRQ----GRIAKMPVKWIAIESLAD------RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYD 225 (272)
T ss_pred CCcccccCcccceec----CCcccCCcccCCHHHccC------CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 999987643211000 011122347999999875 356789999999999999999 6677643211
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....++..+.+++.+||..+|.+||++.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 226 YLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1123466778999999999999999999998764
No 239
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.97 E-value=2e-29 Score=273.35 Aligned_cols=239 Identities=16% Similarity=0.184 Sum_probs=185.0
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCc----EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSP----VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~----VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
....|++.+.||+|+ | +||+|+++.+++. |+||++... ......+.+.+|+.+++.++||||+++++++..+
T Consensus 5 ~~~~f~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~ 81 (316)
T cd05108 5 KETEFKKIKVLGSGAFG--TVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 81 (316)
T ss_pred chhhceeeeeeecCCCc--eEEEEEEecCCCccceeEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC
Confidence 456799999999998 8 9999998777664 899998643 2233456788999999999999999999988752
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~K 169 (771)
..++|+||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+|
T Consensus 82 ---------~~~~v~e~~~~g~l~~~l~~~~~~--~~~~~~~~~~~qi~~~L~~LH~-~~iiH~dlkp~Nill~~~~~~k 149 (316)
T cd05108 82 ---------TVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLEE-RRLVHRDLAARNVLVKTPQHVK 149 (316)
T ss_pred ---------CceeeeecCCCCCHHHHHHhcccc--CCHHHHHHHHHHHHHHHHHHHh-cCeeccccchhheEecCCCcEE
Confidence 468999998 6799988765321 2233445568899999999996 8999999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh-
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR- 247 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~- 247 (771)
|+|||++........ .........+..|++||++.+ ..++.++|+|||||++||+++ |..|+......
T Consensus 150 l~DfG~a~~~~~~~~----~~~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~ 219 (316)
T cd05108 150 ITDFGLAKLLGADEK----EYHAEGGKVPIKWMALESILH------RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 219 (316)
T ss_pred EccccccccccCCCc----ceeccCCccceeecChHHhcc------CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 999999987653211 111111122347999999875 356789999999999999987 88887542211
Q ss_pred ------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+..+..++.+|+..+|..||++.+++.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 220 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred HHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 112345678899999999999999999998864
No 240
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.97 E-value=3e-29 Score=266.39 Aligned_cols=241 Identities=14% Similarity=0.167 Sum_probs=185.6
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
...|++.+.||.|+ | .||+|..+. .+..|++|.+..... ......+.+|+..++.++||||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 5 RDSITLLRALGHGAFG--EVYEGLYRGRDGDAVELQVAVKTLPESCS-EQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred HHHcEeeeECCCCCCC--cEEEEEEecCCCCCCceeEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 35699999999998 8 899999987 678899998864322 22345678899999999999999999988753
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCC----CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLE----GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT 165 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~----~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~ 165 (771)
...|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||+|+||+++.+
T Consensus 82 --------~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~nil~~~~ 152 (277)
T cd05036 82 --------LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE-NHFIHRDIAARNCLLTCK 152 (277)
T ss_pred --------CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccchheEEEecc
Confidence 3679999999 5799998775421 112334456679999999999996 899999999999999876
Q ss_pred C---cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCC
Q 004157 166 L---DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLS 241 (771)
Q Consensus 166 G---~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~ 241 (771)
| .+||+|||+++......... .......+..|+|||++.+ ..++.++|+|||||++|||++ |..||
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~il~el~~~g~~pf 222 (277)
T cd05036 153 GPGRVAKIADFGMARDIYRASYYR----KGGRAMLPIKWMPPEAFLD------GIFTSKTDVWSFGVLLWEIFSLGYMPY 222 (277)
T ss_pred CCCcceEeccCccccccCCcccee----cCCCCCccHhhCCHHHHhc------CCcCchhHHHHHHHHHHHHHcCCCCCC
Confidence 6 59999999998764321100 0001122347999999865 356789999999999999997 77777
Q ss_pred Chhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 242 KTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 242 ~~~~l~-------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...... ....+|..+.+++.+|+..+|++||++.+++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 223 PGRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred CCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 542210 113467789999999999999999999999876
No 241
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.97 E-value=2.4e-29 Score=270.18 Aligned_cols=236 Identities=15% Similarity=0.184 Sum_probs=182.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCC--cEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGS--PVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~--~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~ 95 (771)
.|++.+.||.|+ | .||+|+.+.++. .++||.+... ......+.+.+|++.++++ +||||+++++++...
T Consensus 3 ~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~---- 75 (297)
T cd05089 3 DIKFEDVIGEGNFG--QVIRAMIKKDGLKMNAAIKMLKEF-ASENDHRDFAGELEVLCKLGHHPNIINLLGACENR---- 75 (297)
T ss_pred cceeeeeecCCCcc--eEEEEEecCCCCcceeEEEEcccc-CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccC----
Confidence 589999999998 8 999999988775 4688877632 2233456788999999999 799999999998763
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCC-------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCE
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSV 160 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI 160 (771)
..+|+|+||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||+||
T Consensus 76 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~-~~ivH~dlkp~Ni 150 (297)
T cd05089 76 ----GYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE-KQFIHRDLAARNV 150 (297)
T ss_pred ----CcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH-CCcccCcCCcceE
Confidence 3789999999 5799998764311 112334566779999999999996 9999999999999
Q ss_pred EEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCC
Q 004157 161 VVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMR 239 (771)
Q Consensus 161 ~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~ 239 (771)
+++.++.+||+|||++...... ........+..|++||+..+ ..++.++|+|||||++|||++ |..
T Consensus 151 ll~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwSlG~il~el~t~g~~ 217 (297)
T cd05089 151 LVGENLASKIADFGLSRGEEVY-------VKKTMGRLPVRWMAIESLNY------SVYTTKSDVWSFGVLLWEIVSLGGT 217 (297)
T ss_pred EECCCCeEEECCcCCCccccce-------eccCCCCcCccccCchhhcc------CCCCchhhHHHHHHHHHHHHcCCCC
Confidence 9999999999999998643221 00111122346999998865 356789999999999999997 887
Q ss_pred CCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 240 LSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 240 p~~~~~l~-------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
||...... ....++..+.+++.+||..+|.+||+++++++.
T Consensus 218 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 218 PYCGMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred CCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 77432211 112467789999999999999999999998764
No 242
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.97 E-value=4.2e-29 Score=261.89 Aligned_cols=229 Identities=15% Similarity=0.146 Sum_probs=179.0
Q ss_pred CCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCccc
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
++||.|+ | .||+|+....+ ..|+||.+...... ...+.+.+|+++++++.||||++++++++. .
T Consensus 1 ~~ig~G~~g--~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---------~ 68 (257)
T cd05060 1 KELGHGNFG--SVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCKG---------E 68 (257)
T ss_pred CccCccCce--eEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC---------C
Confidence 4688887 7 99999876554 78999999865443 345678899999999999999999998763 2
Q ss_pred EEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 101 TIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 101 ~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
.+|+||||+ ++|.++|..... .....+..++.|++.||.|||+ .+++||||||+||+++.+|.+||+|||++..
T Consensus 69 ~~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lh~-~~i~H~di~p~nili~~~~~~kl~df~~~~~ 144 (257)
T cd05060 69 PLMLVMELAPLGPLLKYLKKRRE---IPVSDLKELAHQVAMGMAYLES-KHFVHRDLAARNVLLVNRHQAKISDFGMSRA 144 (257)
T ss_pred ceEEEEEeCCCCcHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHhh-cCeeccCcccceEEEcCCCcEEeccccccce
Confidence 679999998 579999987552 2344566779999999999996 8999999999999999999999999999886
Q ss_pred cCCCCCCCCCCccc-cccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----------
Q 004157 179 FDGNNEAANGPMLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL---------- 246 (771)
Q Consensus 179 ~~~~~~~~~~~~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l---------- 246 (771)
...... .+.. .....+..|+|||...+ ..++.++|+|||||++|++++ |.+||.....
T Consensus 145 ~~~~~~----~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~ 214 (257)
T cd05060 145 LGAGSD----YYRATTAGRWPLKWYAPECINY------GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESG 214 (257)
T ss_pred eecCCc----ccccccCccccccccCHHHhcC------CCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC
Confidence 643211 1100 11111247999998865 356779999999999999997 8888753211
Q ss_pred ---hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 ---RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 ---~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+|++.+|.+||++.++++
T Consensus 215 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 215 ERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 112346678899999999999999999999875
No 243
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.97 E-value=5.4e-29 Score=266.15 Aligned_cols=251 Identities=17% Similarity=0.155 Sum_probs=190.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d 94 (771)
...+|++.+.+|.|. | .||+++.+.+++.|+||++..... ....+.+|+.+++++ +||||+++++++...+..
T Consensus 20 ~~~~y~~~~~l~~g~~~--~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~ 94 (291)
T cd06639 20 PTDTWEIIETIGKGTYG--KVYKVTNKKDGSLAAVKILDPISD---VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKL 94 (291)
T ss_pred CCCCeEEEEEeecCCCe--EEEEEEECCCCCEEEEEEeccccc---HHHHHHHHHHHHHHhcCCCCeEEEEEEEEecccc
Confidence 466899999999998 8 999999999999999999875322 234567899999999 799999999998754311
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
....+|+||||+ ++|.++++.... ........+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+
T Consensus 95 ---~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~ivH~dlkp~nili~~~~~~kl~ 170 (291)
T cd06639 95 ---VGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN-NRIIHRDVKGNNILLTTEGGVKLV 170 (291)
T ss_pred ---CCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEEcCCCCEEEe
Confidence 124789999999 478888865321 1223445577789999999999996 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hh
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~ 247 (771)
|||++......... .........|+|||++.... .....++.++|+|||||++|+|++|.+|+.... +.
T Consensus 171 dfg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~-~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~ 243 (291)
T cd06639 171 DFGVSAQLTSTRLR------RNTSVGTPFWMAPEVIACEQ-QYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLF 243 (291)
T ss_pred ecccchhccccccc------ccCccCCccccChhhhcCCC-CcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHH
Confidence 99998765432110 11122345799999875421 001235678999999999999999998874321 11
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 248 -----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
....++..+.+++.+||+.+|.+||++.++++| +||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~-~~~ 290 (291)
T cd06639 244 KIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH-PFI 290 (291)
T ss_pred HHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC-ccc
Confidence 112344568889999999999999999999998 444
No 244
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=7.6e-31 Score=266.54 Aligned_cols=242 Identities=19% Similarity=0.227 Sum_probs=190.0
Q ss_pred CceecC-CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcC
Q 004157 20 PYNIGD-PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 20 ~Y~i~e-~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~ 96 (771)
.|+|.. .+|-|- | +|..+.+|.+|+.+|+|++.- .+.+++|++..-... ||||+.++|+|++.-.+
T Consensus 62 dY~is~qvLG~GinG--kV~~C~~k~T~ekfALKvL~D-------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~-- 130 (400)
T KOG0604|consen 62 DYSISWQVLGAGING--KVVQCVHKRTQEKFALKVLLD-------SPKARREVELHWMASGHPHIVSIIDVYENSYQG-- 130 (400)
T ss_pred hheehhhhhccccCC--ceEEEEeccchhhhHHHHHhc-------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccC--
Confidence 576654 567777 8 999999999999999999752 356889998776654 99999999999864322
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC---CcEEEE
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT---LDWKLH 171 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~---G~~KL~ 171 (771)
..++.||||.+ +.|...|+.++.... .++....++.||+.|+.|||. .+|.||||||+|++.+.. ..+||+
T Consensus 131 --rkcLLiVmE~meGGeLfsriq~~g~~af-TErea~eI~~qI~~Av~~lH~-~nIAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 131 --RKCLLIVMECMEGGELFSRIQDRGDQAF-TEREASEIMKQIGLAVRYLHS-MNIAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred --ceeeEeeeecccchHHHHHHHHcccccc-hHHHHHHHHHHHHHHHHHHHh-cchhhccCChhheeeecCCCCcceEec
Confidence 66899999999 569999988764322 233345569999999999996 999999999999999754 559999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---- 247 (771)
||||+........ ....+.++.|.|||++.. ..|...+|+||||++||-|++|.+||-+..-.
T Consensus 207 DfGFAK~t~~~~~-------L~TPc~TPyYvaPevlg~------eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aisp 273 (400)
T KOG0604|consen 207 DFGFAKETQEPGD-------LMTPCFTPYYVAPEVLGP------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 273 (400)
T ss_pred ccccccccCCCcc-------ccCCcccccccCHHHhCc------hhcCCCCCccchhHHHHHhhcCCCcccccCCccCCh
Confidence 9999987654221 112244668999999876 46888999999999999999999998543211
Q ss_pred ----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhh
Q 004157 248 ----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLV 289 (771)
Q Consensus 248 ----------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv 289 (771)
+...+++...++++.||..+|.+|++++++++|+|.-+...|
T Consensus 274 gMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~v 331 (400)
T KOG0604|consen 274 GMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAV 331 (400)
T ss_pred hHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccC
Confidence 113456678888999999999999999999999766555443
No 245
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.97 E-value=3.7e-29 Score=262.23 Aligned_cols=232 Identities=14% Similarity=0.166 Sum_probs=180.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.||.|+ | .||.|..+ ++..|++|.+...... ...+.+|+..|++++||||++++++++..
T Consensus 5 ~~~~~~~lg~G~~~--~vy~~~~~-~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 71 (256)
T cd05114 5 ELTFMKELGSGQFG--VVHLGKWR-AQIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQQ------- 71 (256)
T ss_pred HcEEeeEecCCcCc--eEEEEEec-cCceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEccC-------
Confidence 488999999998 8 99999876 4668999988643222 34578899999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 72 -~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~ni~i~~~~~~kl~d~g~~ 147 (256)
T cd05114 72 -KPLYIVTEFMENGCLLNYLRQRQG--KLSKDMLLSMCQDVCEGMEYLER-NSFIHRDLAARNCLVSSTGVVKVSDFGMT 147 (256)
T ss_pred -CCEEEEEEcCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHH-CCccccccCcceEEEcCCCeEEECCCCCc
Confidence 3789999999 579888875431 12344566779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----hc---
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----RN--- 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----~~--- 248 (771)
......... .......+..|+|||+..+ ..++.++|+|||||++|++++ |..||..... ..
T Consensus 148 ~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~ 216 (256)
T cd05114 148 RYVLDDEYT-----SSSGAKFPVKWSPPEVFNF------SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISR 216 (256)
T ss_pred cccCCCcee-----ccCCCCCchhhCChhhccc------CccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC
Confidence 765432110 0111123347999999865 356679999999999999999 7777753221 10
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 249 ------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
....+..+.+++.+|+..+|.+||++.++++
T Consensus 217 ~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 217 GFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred CCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 1224556889999999999999999999875
No 246
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.3e-31 Score=265.96 Aligned_cols=258 Identities=17% Similarity=0.319 Sum_probs=201.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|+-..++|+|. | .||+|+.+.+|+.|++|+.-..+..+..-..+.+|+++|..|+|+|++.+++.+..........
T Consensus 18 ~yek~~kigqGtfg--eVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFG--EVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred HHHHHHhcCCchHH--HHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 466667899998 8 8999999999999999987776667777777889999999999999999998876432211112
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
+..+|+|+.+| .+|.-+|.+.... .....|+..+.+++.||.|||. .+|+|||+|+.||+|+.+|.+||+|||+++
T Consensus 96 r~t~ylVf~~cehDLaGlLsn~~vr--~sls~Ikk~Mk~Lm~GL~~iHr-~kilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 96 RATFYLVFDFCEHDLAGLLSNRKVR--FSLSEIKKVMKGLMNGLYYIHR-NKILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred cceeeeeHHHhhhhHHHHhcCcccc--ccHHHHHHHHHHHHHHHHHHHH-hhHHhhcccHhhEEEcCCceEEeecccccc
Confidence 55799999999 5788888665321 1233477789999999999996 899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R------ 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~------ 247 (771)
.+.......... ....+++..|++||.+.+. +.|+.++|+|+-||++.||+++.++++...- .
T Consensus 173 ~fs~~~n~~kpr--ytnrvvTLwYrppEllLG~-----r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~Lc 245 (376)
T KOG0669|consen 173 AFSTSKNVVKPR--YTNRVVTLWYRPPELLLGD-----REYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLC 245 (376)
T ss_pred ceecccccCCCC--cccceeeeecCCHHHhhcc-----cccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHh
Confidence 776543222111 2345667799999999986 6888999999999999999999988753210 0
Q ss_pred ------------------cc--CCCC-----------------cchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhh
Q 004157 248 ------------------NT--ASIP-----------------KSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLV 289 (771)
Q Consensus 248 ------------------~~--~~IP-----------------~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv 289 (771)
.+ ..+| +...+++.+||..||.+|+.++++++|.+||.++..
T Consensus 246 Gs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p 324 (376)
T KOG0669|consen 246 GSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP 324 (376)
T ss_pred ccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence 00 1111 145677889999999999999999999777776654
No 247
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.97 E-value=3.8e-29 Score=262.31 Aligned_cols=233 Identities=17% Similarity=0.172 Sum_probs=181.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.+|.|. | .||.|.++ ++..++||++...... ...+.+|+++++.++||||++++++++..
T Consensus 5 ~~~~~~~lg~G~~~--~v~~~~~~-~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (256)
T cd05059 5 ELTFLKELGSGQFG--VVHLGKWR-GKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCTKQ------- 71 (256)
T ss_pred HcchhhhhccCCCc--eEEEeEec-CCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEcCC-------
Confidence 588999999998 8 89999886 5778999998754332 23467799999999999999999998753
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+|||++.+|.+||+|||++
T Consensus 72 -~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~-~~i~H~dl~p~ni~i~~~~~~kl~dfg~~ 147 (256)
T cd05059 72 -RPIFIVTEYMANGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLES-NGFIHRDLAARNCLVGEDNVVKVSDFGLA 147 (256)
T ss_pred -CceEEEEecCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHH-CCcccccccHhhEEECCCCcEEECCcccc
Confidence 3789999999 469998876432 23345567779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh---------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL--------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l--------- 246 (771)
+...+.... .......+..|+|||+..+ ..++.++|+|||||++|++++ |..||.....
T Consensus 148 ~~~~~~~~~-----~~~~~~~~~~y~~Pe~~~~------~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~ 216 (256)
T cd05059 148 RYVLDDQYT-----SSQGTKFPVKWAPPEVFDY------SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSA 216 (256)
T ss_pred eeccccccc-----ccCCCCCCccccCHHHhcc------CCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHc
Confidence 765432100 0001112237999999875 356678999999999999998 6777643211
Q ss_pred ----hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ----~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||+.+|++||++.++++.
T Consensus 217 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 217 GYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred CCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 1113457789999999999999999999998864
No 248
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.97 E-value=5.3e-29 Score=259.32 Aligned_cols=240 Identities=23% Similarity=0.286 Sum_probs=193.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.++.|+ | .||.+.+..++..|+||++............+.+|++.++.++|||++++++.+...
T Consensus 1 ~y~~~~~l~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~------- 71 (258)
T cd08215 1 KYEIIKQIGKGSFG--KVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK------- 71 (258)
T ss_pred CceEEeeeccCCCe--EEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC-------
Confidence 588999999987 7 999999999999999999987655445567788999999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+|+|++ ++|.+++..... ........+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 72 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~-~~~~H~dl~~~nil~~~~~~~~l~d~~~ 149 (258)
T cd08215 72 -GKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS-RKILHRDIKPQNIFLTSNGLVKLGDFGI 149 (258)
T ss_pred -CEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh-CCEecccCChHHeEEcCCCcEEECCccc
Confidence 4899999999 479998877531 1223344566779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc-------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------- 248 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~------- 248 (771)
+........ . .........|+|||...+ ..++.++|+|+||+++|++++|..++.......
T Consensus 150 ~~~~~~~~~-----~-~~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~ 217 (258)
T cd08215 150 SKVLSSTVD-----L-AKTVVGTPYYLSPELCQN------KPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILK 217 (258)
T ss_pred eeecccCcc-----e-ecceeeeecccChhHhcc------CCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc
Confidence 977654210 0 111233447999998765 346678999999999999999998875432111
Q ss_pred --c----CCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 249 --T----ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 249 --~----~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
. ..++..+.+++.+||+.+|.+||++.++++|++
T Consensus 218 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~ 257 (258)
T cd08215 218 GQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPF 257 (258)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCC
Confidence 1 245678899999999999999999999999843
No 249
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=3.8e-29 Score=265.59 Aligned_cols=233 Identities=16% Similarity=0.202 Sum_probs=182.2
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
||.|+ | +||++.++.+|+.|+||++.++... ......+.+|+++|++++||||+++++.++.. ..+|+
T Consensus 1 lg~g~~g--~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------~~~~l 70 (277)
T cd05577 1 LGKGGFG--EVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETK--------DDLCL 70 (277)
T ss_pred CCCCCce--eEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecC--------CeEEE
Confidence 46666 7 9999999999999999999864322 22345667899999999999999999999863 38999
Q ss_pred EecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCC
Q 004157 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (771)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~ 182 (771)
||||+ ++|.+++...... ......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||++......
T Consensus 71 v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~-~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 71 VMTLMNGGDLKYHIYNVGEP-GFPEARAIFYAAQIICGLEHLHQ-RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG 148 (277)
T ss_pred EEecCCCCcHHHHHHHcCcC-CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEECCCCCEEEccCcchhhhccC
Confidence 99999 5799888765421 12344456668999999999996 89999999999999999999999999998765431
Q ss_pred CCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------h--------
Q 004157 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------R-------- 247 (771)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------~-------- 247 (771)
.. .........|++||+..+. .++.++|+|||||++|+|++|..||..... .
T Consensus 149 ~~-------~~~~~~~~~y~~PE~~~~~------~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 215 (277)
T cd05577 149 KK-------IKGRAGTPGYMAPEVLQGE------VYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAV 215 (277)
T ss_pred Cc-------cccccCCCCcCCHHHhcCC------CCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccc
Confidence 10 0112234489999998753 466789999999999999999988753211 0
Q ss_pred -ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCc
Q 004157 248 -NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQ 285 (771)
Q Consensus 248 -~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||+.+|.+|| ++.+++.| +||.
T Consensus 216 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h-~~~~ 258 (277)
T cd05577 216 EYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH-PLFK 258 (277)
T ss_pred cCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC-hhhh
Confidence 1134577899999999999999999 88889988 5553
No 250
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.97 E-value=3.5e-29 Score=262.94 Aligned_cols=235 Identities=16% Similarity=0.171 Sum_probs=183.1
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|++.+++|.|+ | .||+|... ++..|+||.+.... ...+.+.+|+.++++++||||+++++.+...
T Consensus 5 ~~~~~~~~~lg~g~~g--~v~~~~~~-~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 73 (261)
T cd05072 5 RESIKLVKKLGAGQFG--EVWMGYYN-NSTKVAVKTLKPGT---MSVQAFLEEANLMKTLQHDKLVRLYAVVTKE----- 73 (261)
T ss_pred hHHeEEeeecCCcCCc--eEEEEEec-CCceEEEEEccCCc---hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCC-----
Confidence 34699999999998 8 89999865 66789999876432 2356788999999999999999999988753
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...|+||||+ ++|.++++...... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 74 ---~~~~lv~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~~l~~~l~~LH~-~~i~H~dl~p~nili~~~~~~~l~dfg 148 (261)
T cd05072 74 ---EPIYIITEYMAKGSLLDFLKSDEGGK-VLLPKLIDFSAQIAEGMAYIER-KNYIHRDLRAANVLVSESLMCKIADFG 148 (261)
T ss_pred ---CCcEEEEecCCCCcHHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhhEEecCCCcEEECCCc
Confidence 3789999999 57999887643221 2233455668999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------- 246 (771)
++......... .......+..|+|||+..+ ..++.++|+|||||++|+|++ |..||.....
T Consensus 149 ~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~ 217 (261)
T cd05072 149 LARVIEDNEYT-----AREGAKFPIKWTAPEAINF------GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSAL 217 (261)
T ss_pred cceecCCCcee-----ccCCCccceecCCHHHhcc------CCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHH
Confidence 99876432110 0111122347999999865 345678999999999999998 7777743211
Q ss_pred ------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 ------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 ------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+|++.+|++||+++++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 218 QRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 112356788999999999999999999998764
No 251
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.97 E-value=4.8e-29 Score=262.76 Aligned_cols=241 Identities=13% Similarity=0.188 Sum_probs=187.3
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC---chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA---QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~---~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
.+|++++.+|.|+ | .||.|+++.+|+.|+||++..... .......+++|++.+++++||||+++++.+....
T Consensus 2 ~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~-- 77 (264)
T cd06653 2 VNWRLGKLLGRGAFG--EVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPE-- 77 (264)
T ss_pred CceeeeeeEccCCCe--EEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCC--
Confidence 4699999999998 8 899999999999999999864321 2244668889999999999999999999987543
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
...+|+|+||+ ++|.+++...... ....+..++.||+.||.|||+ .+++|+||+|+||+++.++.++|+|
T Consensus 78 ----~~~~~~v~e~~~~~~L~~~~~~~~~l---~~~~~~~~~~~i~~al~~LH~-~~i~H~dl~p~ni~i~~~~~~~l~d 149 (264)
T cd06653 78 ----EKKLSIFVEYMPGGSIKDQLKAYGAL---TENVTRRYTRQILQGVSYLHS-NMIVHRDIKGANILRDSAGNVKLGD 149 (264)
T ss_pred ----CCEEEEEEEeCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHh-CCEecCCCCHHHEEEcCCCCEEECc
Confidence 24789999999 4798888765422 233455568999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hh-
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~- 247 (771)
||++........... . .........|+|||++.+ ...+.++|+|||||++|++++|..||.... ..
T Consensus 150 fg~~~~~~~~~~~~~-~--~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 220 (264)
T cd06653 150 FGASKRIQTICMSGT-G--IKSVTGTPYWMSPEVISG------EGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFK 220 (264)
T ss_pred cccccccccccccCc-c--ccccCCcccccCHhhhcC------CCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHH
Confidence 999986643111000 0 111233457999999876 345678999999999999999998885321 00
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
....+++.+.+++.+|+. +|.+||++.+++.|+
T Consensus 221 ~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~ 262 (264)
T cd06653 221 IATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHP 262 (264)
T ss_pred HHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCC
Confidence 012345568888899999 579999999999883
No 252
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=3e-29 Score=271.09 Aligned_cols=247 Identities=15% Similarity=0.175 Sum_probs=182.9
Q ss_pred ceecCCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCccc
Q 004157 21 YNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 21 Y~i~e~ig~G~g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
|.+++.+|.| | .||.++.+.+++.|+||++............+.+|++.++.++||||+++++++... .
T Consensus 4 ~~i~~~~~~~-~--~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~--------~ 72 (314)
T cd08216 4 TLIGKCFEDL-M--IVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVD--------S 72 (314)
T ss_pred hhhhHhhcCC-c--eEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecC--------C
Confidence 5556655544 4 566666677899999999987544445677899999999999999999999998863 4
Q ss_pred EEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 101 TIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 101 ~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
.+|++|||+ +.|.+++...... ......+..+++||+.||.|||+ .+++||||+|+||+++.+|.+||+||+.+..
T Consensus 73 ~~~~~~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~l~~~L~~LH~-~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~ 150 (314)
T cd08216 73 ELYVVSPLMAYGSCEDLLKTHFPE-GLPELAIAFILKDVLNALDYIHS-KGFIHRSVKASHILLSGDGKVVLSGLRYSVS 150 (314)
T ss_pred eEEEEEeccCCCCHHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCcceEEEecCCceEEecCcccee
Confidence 789999999 5688888764322 12345567779999999999996 8999999999999999999999999999876
Q ss_pred cCCCCCCCCCCcc-ccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-----hcc---
Q 004157 179 FDGNNEAANGPML-QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-----RNT--- 249 (771)
Q Consensus 179 ~~~~~~~~~~~~~-~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-----~~~--- 249 (771)
............. .........|+|||++.+.. ..++.++|+|||||++|+|++|..||...+. ...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~ 226 (314)
T cd08216 151 MIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNL----QGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGT 226 (314)
T ss_pred eccccccccccccccccccccccccCHHHhcCCC----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Confidence 6432211100000 11112334799999986531 2466789999999999999999988753210 000
Q ss_pred --------------------------------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 250 --------------------------------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 250 --------------------------------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
..+...+.+++.+||..+|.+||++.++++| +||+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~-p~~~ 299 (314)
T cd08216 227 VPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH-SFFK 299 (314)
T ss_pred CccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC-chHh
Confidence 0011246678999999999999999999998 4553
No 253
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.96 E-value=3.9e-29 Score=262.35 Aligned_cols=231 Identities=14% Similarity=0.154 Sum_probs=178.9
Q ss_pred CCCCCC-CceEEEEeEE--CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTS--KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~--k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
+||.|+ | +||+|.. +.++..|+||++..........+.+.+|+.+++.++||||+++++.++. ...
T Consensus 2 ~lg~G~~g--~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------~~~ 70 (257)
T cd05116 2 ELGSGNFG--TVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA---------ESW 70 (257)
T ss_pred cCCCcCCc--ceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC---------CCc
Confidence 578887 8 8999964 4567899999987654444556778999999999999999999998753 257
Q ss_pred EEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
|+||||+ ++|.+++..... .....+..++.|++.||.|||+ .+++||||||.||+++.++.+||+|||++....
T Consensus 71 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~al~~lH~-~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 71 MLVMELAELGPLNKFLQKNKH---VTEKNITELVHQVSMGMKYLEE-TNFVHRDLAARNVLLVTQHYAKISDFGLSKALG 146 (257)
T ss_pred EEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEeecccchhhEEEcCCCeEEECCCccccccC
Confidence 9999998 579998876432 2234456669999999999996 899999999999999999999999999987764
Q ss_pred CCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-------------
Q 004157 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------------- 246 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------------- 246 (771)
....... .......+..|+|||.+.. ..++.++|+|||||++||+++ |..||.....
T Consensus 147 ~~~~~~~---~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~ 217 (257)
T cd05116 147 ADENYYK---AKTHGKWPVKWYAPECMNY------YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERM 217 (257)
T ss_pred CCCCeee---ecCCCCCCccccCHhHhcc------CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCC
Confidence 3211000 0111122357999998765 346678999999999999997 8888753211
Q ss_pred hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+|++.+|.+||++.++.+.
T Consensus 218 ~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~ 251 (257)
T cd05116 218 ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELR 251 (257)
T ss_pred CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHH
Confidence 1123467789999999999999999999988654
No 254
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.96 E-value=1.7e-29 Score=277.32 Aligned_cols=250 Identities=20% Similarity=0.273 Sum_probs=188.5
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc-
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA- 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~- 95 (771)
..+|++.+.||.|+ | .||+|+++.+|..|+||++..+.. ...+.+.+|++++++++||||+++++.+.......
T Consensus 4 ~~~y~~~~~Lg~g~~g--~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (342)
T cd07854 4 GSRYMDLRPLGCGSNG--LVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLT 79 (342)
T ss_pred CcceEEEEEecCCCCE--EEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccc
Confidence 46799999999997 7 999999999999999999976543 33566888999999999999999998876532110
Q ss_pred -----CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEc-CCCcE
Q 004157 96 -----TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT-QTLDW 168 (771)
Q Consensus 96 -----~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~-~~G~~ 168 (771)
......+|+||||+ ++|.+++....+ ....+..++.||+.||.|||+ .+++||||||+||+++ .++.+
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~l----~~~~~~~~~~qi~~aL~~LH~-~givH~dikp~Nili~~~~~~~ 154 (342)
T cd07854 80 EDVGSLTELNSVYIVQEYMETDLANVLEQGPL----SEEHARLFMYQLLRGLKYIHS-ANVLHRDLKPANVFINTEDLVL 154 (342)
T ss_pred cccccccccceEEEEeecccccHHHHHHcCCC----CHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHEEEcCCCceE
Confidence 00013689999999 567777765432 344566679999999999996 8999999999999997 45678
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-- 246 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-- 246 (771)
||+|||++.......... + . .....+...|+|||++.+. ..++.++|+|||||++|+|++|..||.....
T Consensus 155 kl~dfg~~~~~~~~~~~~-~-~-~~~~~~~~~y~aPE~~~~~-----~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~ 226 (342)
T cd07854 155 KIGDFGLARIVDPHYSHK-G-Y-LSEGLVTKWYRSPRLLLSP-----NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE 226 (342)
T ss_pred EECCcccceecCCccccc-c-c-cccccccccccCHHHHhCc-----cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 999999987654321100 0 0 0111234479999987542 3466789999999999999999988742110
Q ss_pred ----------------------------------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 247 ----------------------------------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 247 ----------------------------------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.....++..+.+++.+||..+|.+||++.+++.| +||+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h-~~~~ 304 (342)
T cd07854 227 QMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH-PYMS 304 (342)
T ss_pred HHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC-Cccc
Confidence 0012356678889999999999999999999998 5665
No 255
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.96 E-value=3.8e-29 Score=266.27 Aligned_cols=236 Identities=14% Similarity=0.170 Sum_probs=181.0
Q ss_pred ceecCCCCCCC-CceEEEEeE----ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGT----SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~----~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
|++.+.||.|+ | +||.++ ...++..|+||++..... ......+.+|++.|++++||||+++++++....
T Consensus 6 ~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 79 (283)
T cd05080 6 LKKIRVLGEGHFG--KVSLYCYDPANDGTGEMVAVKTLKRECG-QQNTSGWKKEINILKTLYHENIVKYKGCCSEQG--- 79 (283)
T ss_pred ceeceecccCCCc--EEEEeeEccccCCCCceEEEEEeccccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---
Confidence 48999999998 8 786654 456788999999875432 234567788999999999999999999887543
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...+|+||||+ ++|.+++..... ....+..++.|++.||.|||+ .+++||||||+||+++.++.+||+||
T Consensus 80 ---~~~~~lv~e~~~~~~l~~~~~~~~l----~~~~~~~i~~~l~~~l~~lH~-~~i~H~dlkp~Nili~~~~~~~l~df 151 (283)
T cd05080 80 ---GKGLQLIMEYVPLGSLRDYLPKHKL----NLAQLLLFAQQICEGMAYLHS-QHYIHRDLAARNVLLDNDRLVKIGDF 151 (283)
T ss_pred ---CceEEEEecCCCCCCHHHHHHHcCC----CHHHHHHHHHHHHHHHHHHHH-CCeeccccChheEEEcCCCcEEEeec
Confidence 34789999999 579988876543 334456679999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------- 245 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-------- 245 (771)
|++.......... .. ......+..|+|||...+ ..++.++|+|||||++|+|++|..|+....
T Consensus 152 g~~~~~~~~~~~~--~~-~~~~~~~~~~~~PE~~~~------~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~ 222 (283)
T cd05080 152 GLAKAVPEGHEYY--RV-REDGDSPVFWYAVECLKE------NKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIG 222 (283)
T ss_pred ccccccCCcchhh--cc-CCCCCCCceeeCHhHhcc------cCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhc
Confidence 9987664321100 00 001122346899998865 346678999999999999999986653211
Q ss_pred ----------h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 246 ----------L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 246 ----------l----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
+ .....+|..+.+++.+|++.+|+.||++.++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 223 PKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred ccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0 001235678999999999999999999999875
No 256
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.96 E-value=4e-29 Score=263.40 Aligned_cols=234 Identities=18% Similarity=0.159 Sum_probs=181.0
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.-+|++.+++|.|+ | +||+|++..+ ..|+||++...... .+.+++|++.+++++||||+++++.++.
T Consensus 5 ~~~~~~~~~lg~g~~~--~v~~~~~~~~-~~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~------ 72 (262)
T cd05071 5 RESLRLEVKLGQGCFG--EVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE------ 72 (262)
T ss_pred hHHeeEeeecCCCCCC--cEEEEEecCC-ceEEEEecccCccC---HHHHHHHHHHHHhCCCCCcceEEEEECC------
Confidence 45699999999998 8 8999988755 46999998754332 3467889999999999999999988753
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...|+||||+ ++|.+++..... .......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 73 ---~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~Nill~~~~~~~L~dfg 147 (262)
T cd05071 73 ---EPIYIVTEYMSKGSLLDFLKGEMG-KYLRLPQLVDMAAQIASGMAYVER-MNYVHRDLRAANILVGENLVCKVADFG 147 (262)
T ss_pred ---CCcEEEEEcCCCCcHHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHH-CCccccccCcccEEEcCCCcEEeccCC
Confidence 2579999999 579999876321 112334455669999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----h--
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----R-- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----~-- 247 (771)
++......... .......+..|++||+..+ ..++.++|+|||||++|++++ |..||..... .
T Consensus 148 ~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~------~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~ 216 (262)
T cd05071 148 LARLIEDNEYT-----ARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 216 (262)
T ss_pred ceeeccccccc-----cccCCcccceecCHhHhcc------CCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHH
Confidence 99766432110 0111123347999998765 356788999999999999999 6666643211 0
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
....+|..+.+++.+|++.+|.+||++.++++
T Consensus 217 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 217 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred hcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 11346788999999999999999999998764
No 257
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.96 E-value=3.9e-29 Score=297.12 Aligned_cols=242 Identities=13% Similarity=0.092 Sum_probs=186.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+|++.+.||.|+ | +||+|+++.+|+.|+||++...... +...+.+.+|++++++++||||++++++++..
T Consensus 3 rYeIi~~LGkGgfG--~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~------ 74 (932)
T PRK13184 3 RYDIIRLIGKGGMG--EVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDG------ 74 (932)
T ss_pred CeEEEEEEecCCCE--EEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeC------
Confidence 699999999998 8 9999999999999999999754322 23456788999999999999999999998763
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCC--------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLE--------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~--------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~ 167 (771)
...|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||+||+++.+|.
T Consensus 75 --~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs-~GIIHRDLKPeNILLd~dg~ 151 (932)
T PRK13184 75 --DPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS-KGVLHRDLKPDNILLGLFGE 151 (932)
T ss_pred --CEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH-CCccccCCchheEEEcCCCC
Confidence 4899999999 5798888753110 111122345568999999999996 89999999999999999999
Q ss_pred EEEEccCcccccCCCCCCCC-----------CCcccc-ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHh
Q 004157 168 WKLHAFDVLSEFDGNNEAAN-----------GPMLQY-AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELF 235 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~-----------~~~~~~-~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~ 235 (771)
+||+|||++........... ..+... ...++..|+|||++.+ ..++.++|+|||||++|||+
T Consensus 152 vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g------~~~S~kSDIWSLGVILyELL 225 (932)
T PRK13184 152 VVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG------VPASESTDIYALGVILYQML 225 (932)
T ss_pred EEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC------CCCCcHhHHHHHHHHHHHHH
Confidence 99999999986632111000 000011 1234558999999876 35678999999999999999
Q ss_pred hCCCCCChhhhh---------------ccCCCCcchHHHHHHHhccCCCCCCChHHHh
Q 004157 236 SGMRLSKTEELR---------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLI 278 (771)
Q Consensus 236 ~g~~p~~~~~l~---------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL 278 (771)
+|..||...... ....+|..+.+++.+||..+|++|++..+.+
T Consensus 226 TG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeL 283 (932)
T PRK13184 226 TLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQEL 283 (932)
T ss_pred HCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 999888543211 1135788899999999999999998755433
No 258
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.96 E-value=3.7e-29 Score=261.06 Aligned_cols=237 Identities=17% Similarity=0.222 Sum_probs=190.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+|++.+.++.|. | .||+++++.+++.|+||++......+.....+.+|++.++.++||||+++++++...
T Consensus 1 ~y~~~~~i~~g~~~--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (256)
T cd08530 1 DFKVLKKLGKGSYG--SVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG------- 71 (256)
T ss_pred CceEeeeecCCCce--eEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC-------
Confidence 489999999987 7 899999999999999999987554444456677899999999999999999999763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
...|+|+||+ ++|.+++..... ........+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||+
T Consensus 72 -~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~-~~i~h~~l~~~ni~~~~~~~~kl~d~g~ 149 (256)
T cd08530 72 -NKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE-QKILHRDLKSANILLVANDLVKIGDLGI 149 (256)
T ss_pred -CEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcccCCCCcceEEEecCCcEEEeeccc
Confidence 4899999999 479888876322 1223344566779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc-------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN------- 248 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~------- 248 (771)
+....... .........|++||.+.+ ..++.++|+||||+++|++++|..|+.......
T Consensus 150 ~~~~~~~~--------~~~~~~~~~~~~Pe~~~~------~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~ 215 (256)
T cd08530 150 SKVLKKNM--------AKTQIGTPHYMAPEVWKG------RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQR 215 (256)
T ss_pred hhhhccCC--------cccccCCccccCHHHHCC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence 87665421 111223457999999865 356678999999999999999998876433211
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 249 ------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
...++..+.+++.+||+.+|.+||++.++++|+
T Consensus 216 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p 254 (256)
T cd08530 216 GKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASP 254 (256)
T ss_pred CCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCC
Confidence 123556789999999999999999999999984
No 259
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2e-30 Score=285.67 Aligned_cols=245 Identities=19% Similarity=0.285 Sum_probs=196.9
Q ss_pred CCCCceecC-----CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEe
Q 004157 17 KDLPYNIGD-----PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (771)
Q Consensus 17 ~~~~Y~i~e-----~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~ 90 (771)
..|.|+..+ .+|.|+ | +||-|+++.+...++||.+..+... ..+-+..|+...++|+|.||++|++++..
T Consensus 568 iefeYeyde~~ervVLGKGTYG--~VYA~RD~~tqvrIaIKEIpekdsr--~~QPLhEEIaLH~~LrHkNIVrYLGs~se 643 (1226)
T KOG4279|consen 568 IEFEYEYDESNERVVLGKGTYG--TVYAARDMDTQVRIAIKEIPEKDSR--EVQPLHEEIALHSTLRHKNIVRYLGSVSE 643 (1226)
T ss_pred eEEEeeecCCCceEEeecCcee--EEEeeccccceeEEEeeecccccch--hhccHHHHHHHHHHHhhHhHHHHhhccCC
Confidence 356777655 368888 8 9999999999999999999765433 45668889999999999999999999764
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEc-CCCc
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVT-QTLD 167 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~-~~G~ 167 (771)
+.++-|.||.| ++|+.+|+..--.-...+..+.++-.||++||+|||+ ..|||||||-+||+|| .+|.
T Consensus 644 --------nGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHe-n~IVHRDIKGDNVLvNTySGv 714 (1226)
T KOG4279|consen 644 --------NGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHE-NKIVHRDIKGDNVLVNTYSGV 714 (1226)
T ss_pred --------CCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhh-cceeeccccCCcEEEeeccce
Confidence 23899999999 6899999764221122345678889999999999995 9999999999999997 5899
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCC---hh
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK---TE 244 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~---~~ 244 (771)
+||+|||-+..+...+ |+ .-.+.++.+|||||++..+ ..+|+.++|||||||.+.||.+|+|||- ..
T Consensus 715 lKISDFGTsKRLAgin-----P~-TETFTGTLQYMAPEvIDqG----~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp 784 (1226)
T KOG4279|consen 715 LKISDFGTSKRLAGIN-----PC-TETFTGTLQYMAPEVIDQG----PRGYGKAADIWSFGCTMVEMATGRPPFVELGSP 784 (1226)
T ss_pred EEecccccchhhccCC-----cc-ccccccchhhhChHhhccC----CcCCCchhhhhhccceeEeeccCCCCeeecCCh
Confidence 9999999998886632 22 2235566799999999765 3689999999999999999999999973 11
Q ss_pred h--------hhccCCCCcch----HHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 245 E--------LRNTASIPKSL----LPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 245 ~--------l~~~~~IP~~l----~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
+ .+....||.++ ..++.+|+.++|..||++.++|.. +|.+
T Consensus 785 qAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D-pFlq 836 (1226)
T KOG4279|consen 785 QAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD-PFLQ 836 (1226)
T ss_pred hHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC-cccc
Confidence 1 23345777764 566889999999999999999987 4553
No 260
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.96 E-value=6.4e-29 Score=264.93 Aligned_cols=241 Identities=16% Similarity=0.248 Sum_probs=192.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
....|++.+.++.|. | .||+|.++.++..|+||++..... ..+.+.+|++.++.++||||+++++.+..+
T Consensus 17 ~~~~~~~~~~l~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 87 (286)
T cd06614 17 PRELYKNLEKIGEGASG--EVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVG---- 87 (286)
T ss_pred ccccchHhHhccCCCCe--EEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC----
Confidence 455699999999987 6 999999998999999999986433 356688899999999999999999999874
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+|+||+ ++|.+++.... .......+..++.||+.||.|||+ .+++|+||+|+||+++.+|.+||+||
T Consensus 88 ----~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~-~gi~H~dl~p~ni~i~~~~~~~l~d~ 160 (286)
T cd06614 88 ----DELWVVMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHS-QNVIHRDIKSDNILLSKDGSVKLADF 160 (286)
T ss_pred ----CEEEEEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCChhhEEEcCCCCEEECcc
Confidence 3899999999 47999998764 112334466679999999999996 99999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|++......... .........|++||++.+ ..++.++|+|||||++|+|++|..|+.....
T Consensus 161 ~~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~ 228 (286)
T cd06614 161 GFAAQLTKEKSK------RNSVVGTPYWMAPEVIKR------KDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLI 228 (286)
T ss_pred chhhhhccchhh------hccccCCcccCCHhHhcC------CCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 998755432110 011123347999998765 3466789999999999999999988753221
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....+|..+.+++.+||+.+|..||++.++++| .||.+
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~-~~~~~ 275 (286)
T cd06614 229 TTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH-PFLKK 275 (286)
T ss_pred HhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC-hHhhc
Confidence 0112367889999999999999999999999998 45543
No 261
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.96 E-value=4e-29 Score=265.28 Aligned_cols=241 Identities=14% Similarity=0.172 Sum_probs=182.1
Q ss_pred CCCceecCCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
..+|++.+.+|.|+ | +||.|.++ .++..|+||++..... ......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~~ig~G~~g--~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 5 REKITMSRELGQGSFG--MVYEGIAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred HHHceeeeeeccccCC--eEEEEEeccCCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 45699999999998 8 89998865 2356899999864322 23345678899999999999999999998753
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCC-------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v 162 (771)
...|+||||+ ++|.+++...... .......+..++.|++.||.|||+ .+++||||||+||++
T Consensus 82 --------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~~vH~dlkp~Nil~ 152 (277)
T cd05062 82 --------QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA-NKFVHRDLAARNCMV 152 (277)
T ss_pred --------CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH-CCcccCCcchheEEE
Confidence 4789999999 5799998764311 111223355568999999999996 899999999999999
Q ss_pred cCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCC
Q 004157 163 TQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLS 241 (771)
Q Consensus 163 ~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~ 241 (771)
+.++.+||+|||++........... ......+..|+|||++.+ ..++.++|+|||||++|||++ |..|+
T Consensus 153 ~~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~~~~p~ 222 (277)
T cd05062 153 AEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKD------GVFTTYSDVWSFGVVLWEIATLAEQPY 222 (277)
T ss_pred cCCCCEEECCCCCccccCCcceeec----CCCCccCHhhcChhHhhc------CCcCchhHHHHHHHHHHHHHcCCCCCC
Confidence 9999999999999876543211000 001122347999999875 356788999999999999998 56666
Q ss_pred Chhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 242 KTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 242 ~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..... .....+|..+.+++.+||+.+|.+||++.+++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 223 QGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred CCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 43211 0113466778999999999999999999998864
No 262
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.96 E-value=3.6e-29 Score=264.94 Aligned_cols=242 Identities=14% Similarity=0.151 Sum_probs=185.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEe
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~ 90 (771)
...+|++.+.||.|+ | .||.|..+.. +..|+||.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 80 (277)
T cd05032 4 PREKITLIRELGQGSFG--MVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVST 80 (277)
T ss_pred chHHeeEEeEecCCCCc--eEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC
Confidence 455799999999998 8 8999998744 3789999986542 22334567889999999999999999999876
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCCC-------CCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEE
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEG-------SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVV 161 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~-------~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~ 161 (771)
. ...|+||||+ ++|.+++....... ......+..++.||+.||.|||+ .+++||||+|+||+
T Consensus 81 ~--------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~di~p~nil 151 (277)
T cd05032 81 G--------QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA-KKFVHRDLAARNCM 151 (277)
T ss_pred C--------CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccChheEE
Confidence 3 3789999999 58999987643211 12233455568999999999996 89999999999999
Q ss_pred EcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCC
Q 004157 162 VTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRL 240 (771)
Q Consensus 162 v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p 240 (771)
++.+|.+||+|||+++.......... ......+..|+|||...+ ..++.++|+|||||++||+++ |..+
T Consensus 152 l~~~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~t~g~~p 221 (277)
T cd05032 152 VAEDLTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPESLKD------GVFTTKSDVWSFGVVLWEMATLAEQP 221 (277)
T ss_pred EcCCCCEEECCcccchhhccCccccc----CCCCCccccccCHHHHhc------CCCCcccchHHHHHHHHHhhccCCCC
Confidence 99999999999999876543211000 111123457999999865 356678999999999999998 7777
Q ss_pred CChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 241 SKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 241 ~~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
+..... .....+|..+.+++.+||..+|++||++.++++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 274 (277)
T cd05032 222 YQGLSNEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSS 274 (277)
T ss_pred CccCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 643211 1123456788999999999999999999998753
No 263
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.96 E-value=8e-29 Score=263.78 Aligned_cols=249 Identities=15% Similarity=0.162 Sum_probs=188.2
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d 94 (771)
...+|++.+.||.|+ | +||+|+++.+++.|+||++..... ....+.+|+++++.+ +||||+++++.+......
T Consensus 16 ~~~~~~~~~~lg~g~~~--~vy~~~~~~~~~~~~ik~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 16 PSDTWEIIETIGKGTYG--KVFKVLNKKNGSKAAVKILDPIHD---IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred cccceeeeeeeccCCCc--EEEEEEECCCCceeEEEeeccccc---hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence 356799999999998 8 999999999999999999864322 234577899999999 699999999987532110
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhC-CCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELG-LEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~-~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
....+|+||||+ ++|.+++.... .........+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+
T Consensus 91 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nili~~~~~~kl~ 166 (286)
T cd06638 91 ---NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV-NKTIHRDVKGNNILLTTEGGVKLV 166 (286)
T ss_pred ---CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh-CCccccCCCHHhEEECCCCCEEEc
Confidence 135899999999 47888876432 11222344466679999999999996 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hh
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~ 247 (771)
|||++........ ......++..|+|||++..... ....++.++|+|||||++|+|++|..|+.... +.
T Consensus 167 dfg~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~-~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~ 239 (286)
T cd06638 167 DFGVSAQLTSTRL------RRNTSVGTPFWMAPEVIACEQQ-LDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALF 239 (286)
T ss_pred cCCceeecccCCC------ccccccCCCcccChhhhchhhh-ccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHh
Confidence 9999876643211 0111234458999999754210 11346678999999999999999998764321 11
Q ss_pred c-----------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 248 N-----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 248 ~-----------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
. ...++..+..++.+||+.+|.+||++.++++|.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 240 KIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred hccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 0 112345689999999999999999999999984
No 264
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.96 E-value=1.4e-29 Score=278.21 Aligned_cols=245 Identities=17% Similarity=0.281 Sum_probs=192.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++.+.||.|. | +||+|+++.+++.|+||++............+.+|+.++++++||||+++++.+..++..
T Consensus 14 ~~~y~~~~~ig~g~~g--~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-- 89 (343)
T cd07851 14 PDRYQNLSPVGSGAYG--QVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSL-- 89 (343)
T ss_pred cCceEEEEEeccCCce--EEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccc--
Confidence 34799999999997 7 999999999999999999876433334456677899999999999999999988654320
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.....+|+|||++ .+|.+++.... .....+.+++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 90 ~~~~~~~lv~e~~~~~L~~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~-~gi~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 90 EDFQDVYLVTHLMGADLNNIVKCQK----LSDDHIQFLVYQILRGLKYIHS-AGIIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred cccccEEEEEecCCCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCCCEEEccccc
Confidence 1123589999999 46888877533 2344567779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h----
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R---- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~---- 247 (771)
+...... ......+..|+|||++.+. ..++.++|+|||||++|++++|..||..... .
T Consensus 165 ~~~~~~~---------~~~~~~~~~y~aPE~~~~~-----~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~ 230 (343)
T cd07851 165 ARHTDDE---------MTGYVATRWYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMN 230 (343)
T ss_pred ccccccc---------ccCCcccccccCHHHHhCC-----CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 9866432 1112334579999997642 2456789999999999999999988742210 0
Q ss_pred -----------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 -----------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 -----------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+||++.++++| +||..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h-~~~~~ 303 (343)
T cd07851 231 LVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH-PYLAE 303 (343)
T ss_pred hcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC-CCccc
Confidence 001346778899999999999999999999998 55543
No 265
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.96 E-value=2.9e-29 Score=268.37 Aligned_cols=242 Identities=17% Similarity=0.238 Sum_probs=185.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e 89 (771)
....|++.+.||.|+ | .||+|.++.. ...|++|.+..... +.....+.+|+..++++ +||||+++++++.
T Consensus 10 ~~~~~~~~~~ig~g~~g--~v~~~~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 86 (293)
T cd05053 10 PRDRLTLGKPLGEGAFG--QVVKAEAVGLDNPNETSTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKHKNIINLLGVCT 86 (293)
T ss_pred CHhHeEEeeEecccccc--cEEEEEEecCCCCCCceeEEEEEccCCCC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence 445799999999998 8 8999987643 36899999875433 33456688999999999 7999999999987
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCC-------------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecC
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGL-------------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~-------------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (771)
.. ..+|+||||+ ++|..++..... ........+..++.||+.||.|||+ .+++|||
T Consensus 87 ~~--------~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~-~~ivH~d 157 (293)
T cd05053 87 QE--------GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS-KKCIHRD 157 (293)
T ss_pred CC--------CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH-CCccccc
Confidence 63 3789999999 579999876421 1122334456679999999999996 8999999
Q ss_pred CCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHH
Q 004157 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (771)
Q Consensus 155 Ikp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el 234 (771)
|||+||+++.+|.+||+|||+++......... .......+..|+|||+..+ ..++.++|+|||||++||+
T Consensus 158 lkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el 227 (293)
T cd05053 158 LAARNVLVTEDHVMKIADFGLARDIHHIDYYR----KTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLLWEI 227 (293)
T ss_pred cceeeEEEcCCCeEEeCcccccccccccccee----ccCCCCCCccccCHHHhcc------CCcCcccceeehhhHHHHH
Confidence 99999999999999999999998765421100 0011122346999998765 3567889999999999999
Q ss_pred hh-CCCCCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 235 FS-GMRLSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 235 ~~-g~~p~~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
++ |..++..... .....++..+.+++.+|+..+|.+||++.+++++
T Consensus 228 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 228 FTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred hcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 97 7776643211 1123456789999999999999999999999874
No 266
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.96 E-value=4.2e-29 Score=261.42 Aligned_cols=239 Identities=16% Similarity=0.281 Sum_probs=184.3
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
+|.|. | .||.++++.+|+.|+||++..... .......+.+|++.+++++||||+++++.++.. ..+|+
T Consensus 1 lg~g~~~--~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--------~~~~l 70 (265)
T cd05579 1 ISKGAYG--RVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGK--------KNLYL 70 (265)
T ss_pred CCCCCce--EEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecC--------cEEEE
Confidence 35565 6 999999999999999999976432 224567789999999999999999999998763 48999
Q ss_pred EecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCC
Q 004157 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (771)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~ 182 (771)
|+|++ ++|.+++..... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++......
T Consensus 71 v~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~L~~lH~-~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 71 VMEYLPGGDLASLLENVGS---LDEDVARIYIAEIVLALEYLHS-NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred EEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-cCeecCCCCHHHeEEcCCCCEEEEecccchhcccC
Confidence 99999 479999887542 2344566779999999999996 99999999999999999999999999998754332
Q ss_pred CCCC--CCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-------------
Q 004157 183 NEAA--NGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------- 247 (771)
Q Consensus 183 ~~~~--~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------- 247 (771)
.... ..............|++||..... ..+.++|+|||||++|++++|..|+......
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~------~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 220 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQ------GHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEW 220 (265)
T ss_pred cccccccccccccCcccCccccCHHHhcCC------CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCC
Confidence 1100 000001112234579999998753 4667899999999999999999887533211
Q ss_pred -ccCCCCcchHHHHHHHhccCCCCCCCh---HHHhhCCCCCcc
Q 004157 248 -NTASIPKSLLPDYQRLLSSMPSRRLNS---SKLIENSEYFQN 286 (771)
Q Consensus 248 -~~~~IP~~l~~~i~~lL~~~P~~Rps~---~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+||++ .++++| +||++
T Consensus 221 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~-~~~~~ 262 (265)
T cd05579 221 PEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH-PFFKG 262 (265)
T ss_pred CccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC-ccccC
Confidence 112247889999999999999999999 999998 55543
No 267
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.96 E-value=2e-29 Score=294.42 Aligned_cols=252 Identities=20% Similarity=0.270 Sum_probs=187.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc---
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA--- 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~--- 95 (771)
.|+..+.+|.|+ | .||++++|-||..||||++..+. .+.....+.+|++.|.+|.|||||+|+..|.+.....
T Consensus 480 DFEEL~lLGkGGFG--~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 480 DFEELELLGKGGFG--SVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred hhHHHHHhcCCCCc--eEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 466677899999 9 99999999999999999999765 5566778889999999999999999998775322000
Q ss_pred -----------------------------------------------C--------------------------------
Q 004157 96 -----------------------------------------------T-------------------------------- 96 (771)
Q Consensus 96 -----------------------------------------------~-------------------------------- 96 (771)
+
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence 0
Q ss_pred ----------------------C-------cccEEEEEecCCc-c-hHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 004157 97 ----------------------S-------TKITIYIVTEPVM-P-LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLN 145 (771)
Q Consensus 97 ----------------------~-------~~~~iyIVtE~v~-~-L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH 145 (771)
. ....+||-||||. . |.+++.++.+.. +. ...+..+.||++||.|+|
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~-d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QR-DEAWRLFREILEGLAYIH 714 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hh-HHHHHHHHHHHHHHHHHH
Confidence 0 1157899999994 3 566666654432 22 335667999999999999
Q ss_pred cCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC---C-------CCCCCC-Cc-cccccccCCCCCChhcccccccc
Q 004157 146 NDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG---N-------NEAANG-PM-LQYAWLVGAQYKPVELAKSDWTA 213 (771)
Q Consensus 146 ~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~---~-------~~~~~~-~~-~~~~~~~~~~Y~aPE~~~~~~~~ 213 (771)
+ .|+|||||||.|||+++++.+||||||+++.... . .....+ .- .....+++.-|+|||++.+. ..
T Consensus 715 ~-~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~-~~ 792 (1351)
T KOG1035|consen 715 D-QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT-SS 792 (1351)
T ss_pred h-CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc-cc
Confidence 6 8999999999999999999999999999987220 0 000001 11 12334455589999998763 11
Q ss_pred ccCCCCCcchHHHHHHHHHHHhhCCCCCChh--------hhhccCCCCcc----------hHHHHHHHhccCCCCCCChH
Q 004157 214 VRKSPPWSIDSWGLGCLIYELFSGMRLSKTE--------ELRNTASIPKS----------LLPDYQRLLSSMPSRRLNSS 275 (771)
Q Consensus 214 ~~~~~~~~~Di~SLG~li~el~~g~~p~~~~--------~l~~~~~IP~~----------l~~~i~~lL~~~P~~Rps~~ 275 (771)
..|..++||||||++++||+.. |.+. .++ -..||.. -..+|+.|++.||.+|||+.
T Consensus 793 --~~Yn~KiDmYSLGIVlFEM~yP---F~TsMERa~iL~~LR-~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~ 866 (1351)
T KOG1035|consen 793 --NKYNSKIDMYSLGIVLFEMLYP---FGTSMERASILTNLR-KGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTAT 866 (1351)
T ss_pred --ccccchhhhHHHHHHHHHHhcc---CCchHHHHHHHHhcc-cCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHH
Confidence 3588999999999999999973 5432 222 2445544 34568899999999999999
Q ss_pred HHhhCCCCCc
Q 004157 276 KLIENSEYFQ 285 (771)
Q Consensus 276 ~lL~~~~fF~ 285 (771)
++|++ ++|-
T Consensus 867 eLL~s-~llp 875 (1351)
T KOG1035|consen 867 ELLNS-ELLP 875 (1351)
T ss_pred HHhhc-cCCC
Confidence 99987 4553
No 268
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.96 E-value=4e-29 Score=265.90 Aligned_cols=239 Identities=17% Similarity=0.215 Sum_probs=182.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
.|.+.+.+|.|+ | +||+|+...+ +..|+||++.... .......+.+|+.+++.++||||+++++.++..
T Consensus 6 ~~~~~~~lg~G~~g--~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~-- 80 (283)
T cd05091 6 TVRFMEELGEDRFG--KVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE-- 80 (283)
T ss_pred HHHHHHHhCCCCCC--eEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC--
Confidence 488899999998 8 9999987543 5789999997543 223456788999999999999999999998763
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCC-------------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCC
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGL-------------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~-------------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~ 158 (771)
..+++++||+ ++|.+++..... ........+..++.|++.||.|||+ .+++||||||+
T Consensus 81 ------~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~-~gi~H~dlkp~ 153 (283)
T cd05091 81 ------QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS-HHVVHKDLATR 153 (283)
T ss_pred ------CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH-cCccccccchh
Confidence 3789999999 578888854221 0112233466779999999999996 89999999999
Q ss_pred CEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-C
Q 004157 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-G 237 (771)
Q Consensus 159 NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g 237 (771)
||+++.++.+||+|||+++........ ........+..|+|||.+.++ .++.++|+|||||++|||++ |
T Consensus 154 Nil~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~~~g 223 (283)
T cd05091 154 NVLVFDKLNVKISDLGLFREVYAADYY----KLMGNSLLPIRWMSPEAIMYG------KFSIDSDIWSYGVVLWEVFSYG 223 (283)
T ss_pred heEecCCCceEecccccccccccchhe----eeccCccCCccccCHHHHhcC------CCCcchhHHHHHHHHHHHHcCC
Confidence 999999999999999998866432110 000111223479999998653 46678999999999999998 6
Q ss_pred CCCCChhhh----h---c------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 238 MRLSKTEEL----R---N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 238 ~~p~~~~~l----~---~------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..++..... . . ...+|..+.+++.+|++.+|.+||++.+++..
T Consensus 224 ~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 224 LQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred CCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 666543211 0 1 13467789999999999999999999998864
No 269
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.96 E-value=4.6e-29 Score=264.97 Aligned_cols=237 Identities=17% Similarity=0.216 Sum_probs=189.2
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|++.+.||.|. | .||+|.++.+++.|+||++...... .....+.+|++.+++++||||+++++.+...
T Consensus 6 ~~~~~~ig~G~~~--~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-------- 74 (277)
T cd06641 6 FTKLEKIGKGSFG--EVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLKD-------- 74 (277)
T ss_pred hhhheeEeecCCe--EEEEEEECCCCcEEEEEEeccccch-HHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC--------
Confidence 77888899987 7 9999999999999999998754332 3456788999999999999999999999863
Q ss_pred cEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 100 ~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..+|+||||+ ++|.+++.... .....+..++.|++.+|.|||+ .+++|+||+|+||+++.+|.++|+|||++.
T Consensus 75 ~~~~lv~e~~~~~~l~~~i~~~~----~~~~~~~~~~~~l~~~l~~lh~-~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06641 75 TKLWIIMEYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHS-EKKIHRDIKAANVLLSEHGEVKLADFGVAG 149 (277)
T ss_pred CeEEEEEEeCCCCcHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHcc-CCeecCCCCHHhEEECCCCCEEEeecccce
Confidence 4899999999 46888886543 2344567779999999999996 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---------- 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---------- 247 (771)
........ .........|+|||.+.+ ...+.++|+|||||++|++++|..|+......
T Consensus 150 ~~~~~~~~------~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~ 217 (277)
T cd06641 150 QLTDTQIK------RNTFVGTPFWMAPEVIKQ------SAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN 217 (277)
T ss_pred ecccchhh------hccccCCccccChhhhcc------CCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCC
Confidence 65432110 111123447999999865 24567899999999999999999887532110
Q ss_pred ---ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 ---NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 ---~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....+|..+.+++.+|+..+|.+||++.++++| +||.+
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~-~~~~~ 258 (277)
T cd06641 218 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH-KFIVR 258 (277)
T ss_pred CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC-HHHhh
Confidence 112356789999999999999999999999998 55544
No 270
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.96 E-value=6.2e-29 Score=262.02 Aligned_cols=238 Identities=16% Similarity=0.171 Sum_probs=185.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCC---CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDD---GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~---g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
..|++.+.||.|+ | +||+|+.+.+ ...|+||++.... .......+.+|+..+++++||||+++++.+...
T Consensus 4 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 77 (266)
T cd05033 4 SYVTIEKVIGGGEFG--EVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKS--- 77 (266)
T ss_pred HHceeeeEecCCccc--eEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecC---
Confidence 4599999999998 8 9999998754 4579999987543 233455678899999999999999999998763
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+||||+ ++|.+++..... ......+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|
T Consensus 78 -----~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh~-~~i~H~di~p~nili~~~~~~~l~d 149 (266)
T cd05033 78 -----RPVMIITEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLSE-MNYVHRDLAARNILVNSNLVCKVSD 149 (266)
T ss_pred -----CceEEEEEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCcceEEEcCCCCEEECc
Confidence 3789999999 479998876432 12233455568999999999996 9999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----- 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----- 246 (771)
||++........ .+.......+..|+|||...+ ..++.++|+|||||++|++++ |..|+.....
T Consensus 150 fg~~~~~~~~~~----~~~~~~~~~~~~y~~Pe~~~~------~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~ 219 (266)
T cd05033 150 FGLSRRLEDSEA----TYTTKGGKIPIRWTAPEAIAY------RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIK 219 (266)
T ss_pred cchhhccccccc----ceeccCCCCCccccChhhhcc------CCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHH
Confidence 999987752111 111112223457999999875 356678999999999999997 7777632111
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
......|..+.+++.+|++.+|.+||++.+++++
T Consensus 220 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 220 AVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1123457789999999999999999999998865
No 271
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-30 Score=278.21 Aligned_cols=248 Identities=19% Similarity=0.268 Sum_probs=196.1
Q ss_pred cee--cCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 21 YNI--GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 21 Y~i--~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
|+| .+.+|+|. | +||-|+++.+|+.||||++++-.-.......+++|+.+|..++||+|+.+...||+
T Consensus 564 YQif~devLGSGQFG--~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET------- 634 (888)
T KOG4236|consen 564 YQIFADEVLGSGQFG--TVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFET------- 634 (888)
T ss_pred HHhhhHhhccCCcce--eeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecC-------
Confidence 555 35788988 9 99999999999999999999854444456789999999999999999999999987
Q ss_pred cccEEEEEecCC-cchHH-HHHH-hCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC---CcEEEE
Q 004157 98 TKITIYIVTEPV-MPLSE-KIKE-LGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT---LDWKLH 171 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~-~L~~-~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~---G~~KL~ 171 (771)
+..+++|||.+ ++..+ .|.. .+. ..++..++.+.||+.||.|||. .+|+||||||+||++... -++|||
T Consensus 635 -~ervFVVMEKl~GDMLEMILSsEkgR---L~er~TkFlvtQIL~ALr~LH~-knIvHCDLKPENVLLas~~~FPQvKlC 709 (888)
T KOG4236|consen 635 -PERVFVVMEKLHGDMLEMILSSEKGR---LPERITKFLVTQILVALRYLHF-KNIVHCDLKPENVLLASASPFPQVKLC 709 (888)
T ss_pred -CceEEEEehhhcchHHHHHHHhhccc---chHHHHHHHHHHHHHHHHHhhh-cceeeccCCchheeeccCCCCCceeec
Confidence 45999999999 66444 4433 222 2344556679999999999995 899999999999999865 459999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-h----h
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-E----L 246 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-~----l 246 (771)
|||+++.+.+.. .+..-++++.|.|||++.. ++|....||||.|++||--++|..||+.+ + +
T Consensus 710 DFGfARiIgEks-------FRrsVVGTPAYLaPEVLrn------kGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQI 776 (888)
T KOG4236|consen 710 DFGFARIIGEKS-------FRRSVVGTPAYLAPEVLRN------KGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQI 776 (888)
T ss_pred cccceeecchhh-------hhhhhcCCccccCHHHHhh------ccccccccceeeeEEEEEEecccccCCCccchhHHh
Confidence 999999887632 1233456679999999987 68889999999999999999999888532 2 2
Q ss_pred hc---------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhhhhhhhh
Q 004157 247 RN---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFM 295 (771)
Q Consensus 247 ~~---------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv~~~~~L 295 (771)
.+ ...|.....++|..||+..-.+|+++++-+.|+|.-.--+...++.|
T Consensus 777 QNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq~w~DLRel 834 (888)
T KOG4236|consen 777 QNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTWLDLREL 834 (888)
T ss_pred hccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcchHHHHHHHH
Confidence 21 13567778999999999999999999999999543333333333433
No 272
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.96 E-value=4.7e-29 Score=274.21 Aligned_cols=245 Identities=17% Similarity=0.283 Sum_probs=189.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..+|++.+.||.|. | .||.|.++.+|+.|+||++..........+.+.+|+.++++++||||+++++++......
T Consensus 16 ~~~y~~~~~lg~G~~g--~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~-- 91 (345)
T cd07877 16 PERYQNLSPVGSGAYG--SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL-- 91 (345)
T ss_pred cCceEEEEEeeecCCe--EEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccc--
Confidence 35799999999998 8 899999999999999999976433333456678899999999999999999988643211
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.....+|+++|++ ++|.+.++...+ ....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 92 ~~~~~~~lv~~~~~~~L~~~~~~~~l----~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIll~~~~~~kl~dfg~ 166 (345)
T cd07877 92 EEFNDVYLVTHLMGADLNNIVKCQKL----TDDHVQFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGL 166 (345)
T ss_pred cccccEEEEehhcccCHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHH-CCeeecCCChHHEEEcCCCCEEEecccc
Confidence 0123689999999 468777765432 334466679999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h----
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R---- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~---- 247 (771)
+....... .....+..|+|||++.+. ..++.++|+|||||++|+|++|.+||..... .
T Consensus 167 ~~~~~~~~---------~~~~~~~~y~aPE~~~~~-----~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 232 (345)
T cd07877 167 ARHTDDEM---------TGYVATRWYRAPEIMLNW-----MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 232 (345)
T ss_pred cccccccc---------cccccCCCccCHHHHhCc-----cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 87653311 112334579999987542 2456789999999999999999988742110 0
Q ss_pred -----------------------cc------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 -----------------------NT------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 -----------------------~~------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.+ ...+..+.+++.+||+.+|.+|+++.+++.| +||..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h-~~f~~ 305 (345)
T cd07877 233 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH-AYFAQ 305 (345)
T ss_pred HhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC-hhhhh
Confidence 00 1235567889999999999999999999998 45643
No 273
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.96 E-value=5e-29 Score=261.77 Aligned_cols=234 Identities=14% Similarity=0.137 Sum_probs=181.3
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
-.|++.+.+|.|. | +||.|.++ .+..|+||.+...... .+.+.+|+..+++++||||+++++++...
T Consensus 4 ~~~~~~~~lg~G~~~--~vy~~~~~-~~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 71 (256)
T cd05113 4 KDLTFLKELGTGQFG--VVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQLYGVCTKQ------ 71 (256)
T ss_pred HHeEEeeEecCcccc--eEEEEEec-CCCcEEEEEcCCCccc---HHHHHHHHHHHhcCCCCCeeeEEEEEccC------
Confidence 4599999999998 8 89999876 3557999998754322 34578899999999999999999998753
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
..+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 72 --~~~~lv~e~~~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~nili~~~~~~kl~d~g~ 146 (256)
T cd05113 72 --RPIYIVTEYMSNGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLES-KQFIHRDLAARNCLVDDQGCVKVSDFGL 146 (256)
T ss_pred --CCcEEEEEcCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeccccCcceEEEcCCCCEEECCCcc
Confidence 3689999999 469888876432 23345567779999999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-------h
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-------R 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l-------~ 247 (771)
+......... .......+..|++||+..+. .++.++|+|||||++|+|++ |..|+..... .
T Consensus 147 ~~~~~~~~~~-----~~~~~~~~~~y~~pe~~~~~------~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~ 215 (256)
T cd05113 147 SRYVLDDEYT-----SSVGSKFPVRWSPPEVLLYS------KFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVS 215 (256)
T ss_pred ceecCCCcee-----ecCCCccChhhCCHHHHhcC------cccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHh
Confidence 8765432110 01111223479999998752 46678999999999999998 7777642110 0
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+..+.+++.+||+.+|.+||++.+++.+
T Consensus 216 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 216 QGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 112345678999999999999999999998864
No 274
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.96 E-value=6.6e-29 Score=261.05 Aligned_cols=236 Identities=17% Similarity=0.176 Sum_probs=183.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|++.+.+|.|+ | .||+|... +++.|+||.+..... ..+.+.+|++.+++++||||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~~--~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 73 (261)
T cd05068 5 RTSIQLLRKLGAGQFG--EVWEGLWN-NTTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTLE----- 73 (261)
T ss_pred hhheeeEEEecccCCc--cEEEEEec-CCeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEecC-----
Confidence 34699999999998 8 89999975 457899999875432 234578899999999999999999988763
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...|+||||+ ++|.+++..... .......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 74 ---~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~~l~dfg 148 (261)
T cd05068 74 ---EPIYIVTELMKYGSLLEYLQGGAG-RALKLPQLIDMAAQVASGMAYLEA-QNYIHRDLAARNVLVGENNICKVADFG 148 (261)
T ss_pred ---CCeeeeeecccCCcHHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCcceEEEcCCCCEEECCcc
Confidence 3789999999 579999876541 112344456669999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------ 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~------ 247 (771)
++.......... ......+..|+|||+..+ ..++.++|+|||||++|++++ |..|+......
T Consensus 149 ~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~ 217 (261)
T cd05068 149 LARVIKEDIYEA-----REGAKFPIKWTAPEAALY------NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQV 217 (261)
T ss_pred eEEEccCCcccc-----cCCCcCceeccCcccccc------CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 998765321100 011112347999998865 356778999999999999998 77777432210
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....++..+.+++.+|++.+|.+||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~ 257 (261)
T cd05068 218 DQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWK 257 (261)
T ss_pred HcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence 113467889999999999999999999998753
No 275
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.96 E-value=6.5e-29 Score=265.48 Aligned_cols=240 Identities=16% Similarity=0.192 Sum_probs=185.3
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEe
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~ 90 (771)
...+|.+.+.+|.|+ | +||.+.++ .++..|+||.+... .......+.+|+..+++++||||+++++++..
T Consensus 3 ~~~~~~~~~~lg~G~~~--~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (288)
T cd05093 3 KRHNIVLKRELGEGAFG--KVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVE 78 (288)
T ss_pred chHHeeeccccCCcCCe--eEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 456799999999998 8 89999853 34567999998753 23345678899999999999999999999876
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCC----------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCC
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGL----------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~----------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~ 158 (771)
. ..+|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++||||||+
T Consensus 79 ~--------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~-~~i~H~dlkp~ 149 (288)
T cd05093 79 G--------DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS-QHFVHRDLATR 149 (288)
T ss_pred C--------CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCcc
Confidence 3 3789999999 579999876532 1112344566779999999999996 89999999999
Q ss_pred CEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-C
Q 004157 159 SVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-G 237 (771)
Q Consensus 159 NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g 237 (771)
||+++.+|.+||+|||++......... ........+..|+|||++.+ ..++.++|+|||||++|+|++ |
T Consensus 150 Nili~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~sDiwslG~il~~l~t~g 219 (288)
T cd05093 150 NCLVGENLLVKIGDFGMSRDVYSTDYY----RVGGHTMLPIRWMPPESIMY------RKFTTESDVWSLGVVLWEIFTYG 219 (288)
T ss_pred eEEEccCCcEEeccCCccccccCCcee----ecCCCCCccccccCHHHhcc------CCCCchhhHHHHHHHHHHHHhCC
Confidence 999999999999999998765432110 00001112347999999875 356779999999999999998 7
Q ss_pred CCCCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 238 MRLSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 238 ~~p~~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.+||..... .....+|..+.+++.+||+.+|.+||++.+++.
T Consensus 220 ~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 220 KQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred CCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 777643211 112356778999999999999999999998864
No 276
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.96 E-value=5e-29 Score=272.38 Aligned_cols=249 Identities=16% Similarity=0.211 Sum_probs=187.6
Q ss_pred CCCce-ecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchh------------HHHHHHHHHHHHhcCCCCCeeE
Q 004157 18 DLPYN-IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDG------------HLAAARNGVKRLRTVRHPNILA 83 (771)
Q Consensus 18 ~~~Y~-i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~------------~~~~~~~ei~~Lk~LrHPnIlk 83 (771)
..+|. +.+.||.|+ | +||+|.++.+++.|+||++........ ....+.+|++++++++||||++
T Consensus 7 ~~ry~~~~~~ig~G~~g--~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 84 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYG--KVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMG 84 (335)
T ss_pred ccchhhhhhcccCCCce--eEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceee
Confidence 34565 567799998 8 999999999999999999875432210 1124678999999999999999
Q ss_pred EeeeEEecccCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE
Q 004157 84 FLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (771)
Q Consensus 84 v~d~~e~e~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v 162 (771)
+++++..+ ..+|+||||+ ++|.+++..... .....+..++.||+.||.|||+ .+++||||+|+||++
T Consensus 85 ~~~~~~~~--------~~~~lv~e~~~~~l~~~l~~~~~---~~~~~~~~~~~ql~~aL~~LH~-~~i~H~dl~~~nill 152 (335)
T PTZ00024 85 LVDVYVEG--------DFINLVMDIMASDLKKVVDRKIR---LTESQVKCILLQILNGLNVLHK-WYFMHRDLSPANIFI 152 (335)
T ss_pred eeEEEecC--------CcEEEEEeccccCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeecccccHHHeEE
Confidence 99999864 4899999999 678888866432 2334456679999999999996 899999999999999
Q ss_pred cCCCcEEEEccCcccccCCCCCCCC--------CCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHH
Q 004157 163 TQTLDWKLHAFDVLSEFDGNNEAAN--------GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (771)
Q Consensus 163 ~~~G~~KL~dFgla~~~~~~~~~~~--------~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el 234 (771)
+.+|.+||+|||++........... .............|+|||++.+. ..++.++|+|||||++|+|
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~~Dv~slG~~l~el 227 (335)
T PTZ00024 153 NSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGA-----EKYHFAVDMWSVGCIFAEL 227 (335)
T ss_pred CCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccC-----CCCCcHHHHHHHHHHHHHH
Confidence 9999999999999976652111000 00000111234479999998653 2456789999999999999
Q ss_pred hhCCCCCChhhh----h------------------------------------ccCCCCcchHHHHHHHhccCCCCCCCh
Q 004157 235 FSGMRLSKTEEL----R------------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNS 274 (771)
Q Consensus 235 ~~g~~p~~~~~l----~------------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~ 274 (771)
++|.++|..... . .....+..+.+++.+||+.+|.+||++
T Consensus 228 ~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~ 307 (335)
T PTZ00024 228 LTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISA 307 (335)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCH
Confidence 999988743210 0 012335668899999999999999999
Q ss_pred HHHhhCCCCCcc
Q 004157 275 SKLIENSEYFQN 286 (771)
Q Consensus 275 ~~lL~~~~fF~n 286 (771)
++++.| +||+.
T Consensus 308 ~~~l~~-~~~~~ 318 (335)
T PTZ00024 308 KEALKH-EYFKS 318 (335)
T ss_pred HHHhcC-cccCC
Confidence 999998 55543
No 277
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.96 E-value=8.2e-29 Score=259.28 Aligned_cols=232 Identities=15% Similarity=0.233 Sum_probs=180.3
Q ss_pred CCCCCCC-CceEEEEeEECCC-CC--cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCccc
Q 004157 25 DPYPSAW-GSWSHFQGTSKDD-GS--PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~-g~--~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
+.||.|+ | +||+|.+..+ +. .|+||.+...... ...+.+.+|++.+++++||||+++++.+.. .
T Consensus 1 ~~ig~g~~~--~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~-------- 68 (257)
T cd05040 1 KKLGDGSFG--VVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-H-------- 68 (257)
T ss_pred CcCCccCcc--cEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC-C--------
Confidence 4578887 8 9999998763 32 6899998865443 456788899999999999999999999875 2
Q ss_pred EEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 101 TIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 101 ~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
.+|+||||+ ++|.+++..... .......+...+.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||++..
T Consensus 69 ~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~-~~i~H~di~p~nil~~~~~~~kl~dfg~~~~ 146 (257)
T cd05040 69 PLMMVTELAPLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLES-KRFIHRDLAARNILLASDDKVKIGDFGLMRA 146 (257)
T ss_pred eEEEEEEecCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHh-CCccccccCcccEEEecCCEEEecccccccc
Confidence 789999998 589999887542 222344455568999999999996 8999999999999999999999999999987
Q ss_pred cCCCCCCCCCCcccc-ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChh---hh-------
Q 004157 179 FDGNNEAANGPMLQY-AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTE---EL------- 246 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~-~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~---~l------- 246 (771)
...... .+... ....+..|+|||...+ ..++.++|+|||||++|+|++ |..|+... +.
T Consensus 147 ~~~~~~----~~~~~~~~~~~~~y~~pE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~ 216 (257)
T cd05040 147 LPQNED----HYVMEEHLKVPFAWCAPESLRT------RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKE 216 (257)
T ss_pred cccccc----ceecccCCCCCceecCHHHhcc------cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc
Confidence 654211 11011 1123347999998865 356778999999999999998 88877321 11
Q ss_pred ----hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ----~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+|+..+|++||++.++++.
T Consensus 217 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 254 (257)
T cd05040 217 GERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREF 254 (257)
T ss_pred CCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHH
Confidence 1123467889999999999999999999998753
No 278
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.96 E-value=1e-28 Score=260.59 Aligned_cols=234 Identities=17% Similarity=0.202 Sum_probs=180.7
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
.+|.|+ | .||+|+++.++..|+||.+..+.. ...+.+.+|+++++.++||||+++++++... ..+|+
T Consensus 15 ~lg~g~~g--~v~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--------~~~~l 82 (268)
T cd06624 15 VLGKGTYG--IVYAARDLSTQVRIAIKEIPERDS--RYVQPLHEEIALHSYLKHRNIVQYLGSDSEN--------GFFKI 82 (268)
T ss_pred EEecCCce--EEEEeEecCCCcEEEEEEecCCCH--HHHHHHHHHHHHHHhcCCCCeeeeeeeeccC--------CEEEE
Confidence 577787 7 999999999999999999876432 3456788999999999999999999998763 48999
Q ss_pred EecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-CCcEEEEccCcccccCC
Q 004157 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~-~G~~KL~dFgla~~~~~ 181 (771)
|+||+ ++|.+++.............+..++.||+.||.|||+ .+++||||+|+||+++. .+.+||+|||++.....
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~ 161 (268)
T cd06624 83 FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD-NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG 161 (268)
T ss_pred EEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcCCCCeEEEecchhheeccc
Confidence 99999 5799988764211111233455668999999999996 89999999999999976 78999999999876543
Q ss_pred CCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----h------hcc-
Q 004157 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----L------RNT- 249 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-----l------~~~- 249 (771)
.... ......+..|+|||++.... ..++.++|+||||+++|+|++|.+|+.... . ...
T Consensus 162 ~~~~------~~~~~~~~~~~aPE~~~~~~----~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 231 (268)
T cd06624 162 INPC------TETFTGTLQYMAPEVIDKGP----RGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHP 231 (268)
T ss_pred CCCc------cccCCCCccccChhhhcccc----ccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCC
Confidence 2110 11123445899999975421 235678999999999999999998874311 0 111
Q ss_pred ---CCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 250 ---ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 250 ---~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
..++..+.+++++||+.+|.+||++.+++.|++
T Consensus 232 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~ 267 (268)
T cd06624 232 EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPF 267 (268)
T ss_pred CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCC
Confidence 234556888999999999999999999999954
No 279
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.96 E-value=7.9e-29 Score=264.95 Aligned_cols=238 Identities=13% Similarity=0.178 Sum_probs=182.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
+|++.+.+|.|+ | +||+|++.. ....|++|.+..... ......+.+|+.+++.++||||+++++.+..+
T Consensus 1 ~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 75 (290)
T cd05045 1 NLVLGKTLGEGEFG--KVVKATAFRLKGRAGYTTVAVKMLKENAS-SSELRDLLSEFNLLKQVNHPHVIKLYGACSQD-- 75 (290)
T ss_pred CccccccccCcCCc--ceEEEEEecCCCCCcceeEEEEecCCCCC-HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecC--
Confidence 488999999998 8 899998753 235688888865432 23456788999999999999999999998764
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCC---------------------CCCcHHHHHHHHHHHHHHHHHHHcCCCc
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLE---------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKL 150 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~---------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~i 150 (771)
...|+|+||+ ++|.+++...... .......+..++.|++.||.|||+ .++
T Consensus 76 ------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i 148 (290)
T cd05045 76 ------GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE-MKL 148 (290)
T ss_pred ------CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH-CCe
Confidence 3689999999 5799888753211 112234466779999999999996 999
Q ss_pred eecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHH
Q 004157 151 VHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCL 230 (771)
Q Consensus 151 vH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~l 230 (771)
+||||+|+||+++.++.+||+|||+++........ ........+..|+|||...+ ..++.++|+|||||+
T Consensus 149 vH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~~ 218 (290)
T cd05045 149 VHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSY----VKRSKGRIPVKWMAIESLFD------HIYTTQSDVWSFGVL 218 (290)
T ss_pred ehhhhhhheEEEcCCCcEEeccccccccccCccch----hcccCCCCCccccCHHHHcc------CCcchHhHHHHHHHH
Confidence 99999999999999999999999998765432110 00111223457999998765 356678999999999
Q ss_pred HHHHhh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 231 IYELFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 231 i~el~~-g~~p~~~~~l~-------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
+|+|++ |..|+...... ....++..+..++.+||+.+|.+||++.++++
T Consensus 219 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 219 LWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 999998 87776532211 12346678999999999999999999999875
No 280
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.96 E-value=6.9e-29 Score=262.25 Aligned_cols=238 Identities=15% Similarity=0.177 Sum_probs=185.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCC---CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD---GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~---g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
....|++.+.+|.|+ | .||+|++... ...|+||.+..... ....+.+.+|+.++++++||||++++++++.+
T Consensus 4 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~- 79 (270)
T cd05056 4 QREDITLGRCIGEGQFG--DVYQGVYMSPENEKIAVAVKTCKNCTS-PSVREKFLQEAYIMRQFDHPHIVKLIGVITEN- 79 (270)
T ss_pred chhhceeeeeeCCccce--eEEEEEEecCCCCCcceEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCchhceeEEEcCC-
Confidence 345699999999998 8 9999997654 35789999875432 33456788999999999999999999988742
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
..|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||
T Consensus 80 --------~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~-~~~~H~dl~p~nili~~~~~~~l 148 (270)
T cd05056 80 --------PVWIVMELAPLGELRSYLQVNKY--SLDLASLILYSYQLSTALAYLES-KRFVHRDIAARNVLVSSPDCVKL 148 (270)
T ss_pred --------CcEEEEEcCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeccccChheEEEecCCCeEE
Confidence 578999999 579999876432 12344566779999999999996 99999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh---
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL--- 246 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l--- 246 (771)
+|||++........ +.......+..|+|||.+.. ..++.++|+|||||++|++++ |..||.....
T Consensus 149 ~d~g~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~ 217 (270)
T cd05056 149 GDFGLSRYLEDESY-----YKASKGKLPIKWMAPESINF------RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV 217 (270)
T ss_pred ccCceeeecccccc-----eecCCCCccccccChhhhcc------CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence 99999876644211 11111122347999998765 356788999999999999986 8887743211
Q ss_pred ----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+|+..+|.+||++.+++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 218 IGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1124567889999999999999999999998764
No 281
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.96 E-value=4e-29 Score=269.49 Aligned_cols=237 Identities=14% Similarity=0.177 Sum_probs=182.5
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcE--EEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPV--SIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~V--aIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d 94 (771)
.+|++.+.||.|+ | +||+|.++.++..+ +||.+... ........+.+|++.++++ +||||++++++++.+
T Consensus 7 ~~~~~~~~lg~G~~g--~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~--- 80 (303)
T cd05088 7 NDIKFQDVIGEGNFG--QVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--- 80 (303)
T ss_pred hhceeeeeecCCCCc--eEEEEEEccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC---
Confidence 3689999999998 8 99999998887654 66665532 2223456788899999999 899999999998764
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCC-------------CCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCC
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEG-------------SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSS 159 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~-------------~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~N 159 (771)
..+|+||||+ ++|.+++....... ......+..++.||+.||.|||+ .+++||||||+|
T Consensus 81 -----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~gi~H~dlkp~N 154 (303)
T cd05088 81 -----GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARN 154 (303)
T ss_pred -----CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh-CCccccccchhe
Confidence 3789999999 57999997653211 12344566779999999999996 999999999999
Q ss_pred EEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CC
Q 004157 160 VVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GM 238 (771)
Q Consensus 160 I~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~ 238 (771)
|+++.++.+||+|||++....... .......+..|+|||+..+ ..++.++|+|||||++|||++ |.
T Consensus 155 ili~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ellt~g~ 221 (303)
T cd05088 155 ILVGENYVAKIADFGLSRGQEVYV-------KKTMGRLPVRWMAIESLNY------SVYTTNSDVWSYGVLLWEIVSLGG 221 (303)
T ss_pred EEecCCCcEEeCccccCcccchhh-------hcccCCCcccccCHHHHhc------cCCcccccchhhhhHHHHHHhcCC
Confidence 999999999999999986432110 0111112347999998865 346678999999999999998 88
Q ss_pred CCCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 239 RLSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 239 ~p~~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.||..... .....++..+.+++.+|++.+|..||++.+++.+
T Consensus 222 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 222 TPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred CCcccCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 77743211 1112467788999999999999999999998875
No 282
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.96 E-value=1.3e-28 Score=267.27 Aligned_cols=241 Identities=15% Similarity=0.132 Sum_probs=188.5
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.-|+..+.+|.|+ | +||+|+++.+|..|+||++..... .......+.+|+++++.++||||+++++++..+
T Consensus 25 ~~f~~~~~lg~G~~~--~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 97 (317)
T cd06635 25 KLFTDLREIGHGSFG--AVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLRE----- 97 (317)
T ss_pred hhhhhhheeccCCCe--EEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC-----
Confidence 3488888999997 7 999999999999999999975432 224456788899999999999999999999864
Q ss_pred CcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 97 STKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
...|+||||+ ++|.+.+...... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||+
T Consensus 98 ---~~~~lv~e~~~g~l~~~~~~~~~~--l~~~~~~~i~~~i~~~l~~lH~-~~i~H~dL~p~Nil~~~~~~~kl~dfg~ 171 (317)
T cd06635 98 ---HTAWLVMEYCLGSASDLLEVHKKP--LQEVEIAAITHGALQGLAYLHS-HNMIHRDIKAGNILLTEPGQVKLADFGS 171 (317)
T ss_pred ---CeEEEEEeCCCCCHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHH-CCcccCCCCcccEEECCCCCEEEecCCC
Confidence 3789999999 6677776543321 2344566679999999999996 8999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h----
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R---- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~---- 247 (771)
+....... .......|+|||++...- ....+.++|+|||||++|+|++|..|+..... .
T Consensus 172 ~~~~~~~~----------~~~~~~~y~aPE~~~~~~---~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~ 238 (317)
T cd06635 172 ASIASPAN----------SFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 238 (317)
T ss_pred ccccCCcc----------cccCCccccChhhhhcCC---CCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh
Confidence 86543211 112344799999974210 12456789999999999999999987643211 0
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||+.+|..||++.++++|.+++.
T Consensus 239 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 239 NESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred ccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 01235567889999999999999999999999965554
No 283
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.96 E-value=4e-29 Score=274.02 Aligned_cols=243 Identities=16% Similarity=0.178 Sum_probs=184.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e 89 (771)
+..+|++.+.||.|+ | .||.|.+.. +++.|+||++...... ...+.+.+|+..++++ +||||+++++++.
T Consensus 5 ~~~~~~i~~~lG~G~fg--~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~~E~~~~~~l~~h~niv~~~~~~~ 81 (337)
T cd05054 5 PRDRLKLGKPLGRGAFG--KVIQASAFGIEKSASCRTVAVKMLKEGATA-SEYKALMTELKILIHIGHHLNVVNLLGACT 81 (337)
T ss_pred CHHHhhhhcccccCcCc--eEEeccccccccccccceeeeeeccCCCCH-HHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence 456799999999998 9 999997543 4578999999754322 3456678899999999 7999999999886
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCC---------------------------------------------
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------------------------------------------- 122 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~--------------------------------------------- 122 (771)
.+ ...+|+++||+ ++|.++|......
T Consensus 82 ~~-------~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (337)
T cd05054 82 KP-------GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLS 154 (337)
T ss_pred cC-------CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchh
Confidence 53 24789999999 5798888643210
Q ss_pred -------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCC
Q 004157 123 -------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189 (771)
Q Consensus 123 -------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~ 189 (771)
.......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++..+......
T Consensus 155 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~---- 229 (337)
T cd05054 155 DVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLAS-RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY---- 229 (337)
T ss_pred hcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcch----
Confidence 012233456678999999999996 89999999999999999999999999999876432110
Q ss_pred ccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChh----hh----h------ccCCCCc
Q 004157 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTE----EL----R------NTASIPK 254 (771)
Q Consensus 190 ~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~----~l----~------~~~~IP~ 254 (771)
........+..|+|||++.+ ..++.++|+|||||++|||++ |..||... .+ . ....++.
T Consensus 230 ~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (337)
T cd05054 230 VRKGDARLPLKWMAPESIFD------KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATP 303 (337)
T ss_pred hhccCCCCCccccCcHHhcC------CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCH
Confidence 00111122347999998866 367789999999999999997 88777431 11 0 0123456
Q ss_pred chHHHHHHHhccCCCCCCChHHHhhC
Q 004157 255 SLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 255 ~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.+.+++.+||+.+|.+||++.+++++
T Consensus 304 ~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 304 EIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHH
Confidence 78899999999999999999999876
No 284
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.96 E-value=1.5e-28 Score=266.39 Aligned_cols=240 Identities=16% Similarity=0.166 Sum_probs=186.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
-|...+++|.|+ | +||+|++..+|..|+||++...... ......+.+|++.++.++||||++++++++..
T Consensus 22 ~~~~~~~lg~g~~g--~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 93 (313)
T cd06633 22 IFVGLHEIGHGSFG--AVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE------ 93 (313)
T ss_pred HhhcceeeccCCCe--EEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC------
Confidence 367777899987 7 9999999999999999999864332 23445678899999999999999999999874
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...|+||||+ ++|.+.+...... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 94 --~~~~lv~e~~~~~l~~~l~~~~~~--l~~~~~~~~~~qi~~al~~LH~-~gi~H~dl~p~nili~~~~~~kL~dfg~~ 168 (313)
T cd06633 94 --HTAWLVMEYCLGSASDLLEVHKKP--LQEVEIAAITHGALQGLAYLHS-HNMIHRDIKAGNILLTEPGQVKLADFGSA 168 (313)
T ss_pred --CEEEEEEecCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCChhhEEECCCCCEEEeecCCC
Confidence 4889999999 6677777654321 2344466679999999999996 89999999999999999999999999987
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h-----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~----- 247 (771)
....... .......|+|||++...- ...++.++|+|||||++|+|++|.+|+...+. .
T Consensus 169 ~~~~~~~----------~~~~~~~y~aPE~~~~~~---~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~ 235 (313)
T cd06633 169 SKSSPAN----------SFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN 235 (313)
T ss_pred cccCCCC----------CccccccccChhhccccC---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Confidence 6432210 112344799999974210 12456789999999999999999987643221 0
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||+.+|.+||++.+++.| +||+.
T Consensus 236 ~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~-~~~~~ 278 (313)
T cd06633 236 DSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH-DFVRR 278 (313)
T ss_pred CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC-cccCC
Confidence 012355678999999999999999999999998 56644
No 285
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.96 E-value=5.2e-29 Score=272.16 Aligned_cols=246 Identities=19% Similarity=0.250 Sum_probs=188.2
Q ss_pred CceecCCCCCCC-CceEEEEeEECCC--CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDD--GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~--g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~ 95 (771)
+|++.+.||.|. | .||.++++.+ +..|+||++..........+.+.+|+.++++++ ||||+++++........
T Consensus 1 ~y~~~~~lg~G~~g--~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~- 77 (332)
T cd07857 1 RYELIKELGQGAYG--IVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGN- 77 (332)
T ss_pred CceEEEEccccCCe--EEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecccc-
Confidence 589999999998 8 9999999988 899999998754333334566788999999995 99999999976542111
Q ss_pred CCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 96 TSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...+|+++|++ .+|...+..... .....+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||
T Consensus 78 ---~~~~~~~~e~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~-~givH~dlkp~Nili~~~~~~kl~Dfg 150 (332)
T cd07857 78 ---FNELYLYEELMEADLHQIIRSGQP---LTDAHFQSFIYQILCGLKYIHS-ANVLHRDLKPGNLLVNADCELKICDFG 150 (332)
T ss_pred ---CCcEEEEEecccCCHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHHeEEcCCCCEEeCcCC
Confidence 34789999999 578888865432 2334466679999999999996 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------- 246 (771)
++........... .......++..|+|||+..+. ..++.++|+|||||++|++++|.+||...+.
T Consensus 151 ~a~~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~-----~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~ 223 (332)
T cd07857 151 LARGFSENPGENA--GFMTEYVATRWYRAPEIMLSF-----QSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQIL 223 (332)
T ss_pred Cceeccccccccc--ccccCcccCccccCcHHHhCC-----CCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHH
Confidence 9986653221110 001122345589999987642 3456789999999999999999988753210
Q ss_pred -----------------------h------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 -----------------------R------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 -----------------------~------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
. ....++..+.+++.+||+.+|.+||++.+++.|++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~ 294 (332)
T cd07857 224 QVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPY 294 (332)
T ss_pred HHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChh
Confidence 0 01134567889999999999999999999999843
No 286
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.96 E-value=6.8e-29 Score=278.27 Aligned_cols=241 Identities=17% Similarity=0.157 Sum_probs=183.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTE 89 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e 89 (771)
+..+|++++.||.|+ | +||+|++... +..|+||++.... .....+.+.+|+++|++|. ||||+++++++.
T Consensus 35 ~~~~~~~~~~LG~G~fG--~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~ 111 (400)
T cd05105 35 PRDGLVLGRILGSGAFG--KVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACT 111 (400)
T ss_pred cccceehhheecCCCCc--eEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence 456799999999998 8 9999987533 3469999997543 3334567889999999996 999999999997
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCC---------------------------------------------
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------------------------------------------- 122 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~--------------------------------------------- 122 (771)
.. ..+||||||| ++|.++|......
T Consensus 112 ~~--------~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (400)
T cd05105 112 KS--------GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQA 183 (400)
T ss_pred cC--------CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccc
Confidence 63 3799999999 6898888653200
Q ss_pred ------------------------------------------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecC
Q 004157 123 ------------------------------------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (771)
Q Consensus 123 ------------------------------------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (771)
.......+..++.||+.||.|||+ .+++|||
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivH~d 262 (400)
T cd05105 184 DTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS-KNCVHRD 262 (400)
T ss_pred cccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh-CCeeCCC
Confidence 011222345668999999999996 8999999
Q ss_pred CCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHH
Q 004157 155 VCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (771)
Q Consensus 155 Ikp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el 234 (771)
|||+||+++.++.+||+|||++......... ........+..|+|||++.+ ..++.++|+|||||++|||
T Consensus 263 ikp~Nill~~~~~~kL~DfGla~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwSlGvil~el 332 (400)
T cd05105 263 LAARNVLLAQGKIVKICDFGLARDIMHDSNY----VSKGSTFLPVKWMAPESIFD------NLYTTLSDVWSYGILLWEI 332 (400)
T ss_pred CChHhEEEeCCCEEEEEeCCcceeccccccc----cccCCcCCCcceEChhhhcC------CCCCchhhHHHHHHHHHHH
Confidence 9999999999999999999998765432110 00111223457999999865 3567899999999999999
Q ss_pred hh-CCCCCChhh----h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 235 FS-GMRLSKTEE----L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 235 ~~-g~~p~~~~~----l----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
++ |..|+.... . .....+|..+.+++.+||+.+|+.||++.++.+
T Consensus 333 lt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 333 FSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 97 777664311 0 112356778999999999999999999988765
No 287
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.96 E-value=1e-28 Score=262.83 Aligned_cols=241 Identities=16% Similarity=0.195 Sum_probs=183.4
Q ss_pred CCCceecCCCCCCC-CceEEEEeEE----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTS----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~----k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
+..|++.+.+|.|+ | +||.|.. ..++..|+||++... .....+.+.+|++++++++||||+++++++...+
T Consensus 3 ~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 78 (284)
T cd05081 3 ERHLKFIQQLGKGNFG--SVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 78 (284)
T ss_pred cccceeeeeccCCCCc--eEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCC
Confidence 45799999999998 8 8999874 457889999998753 2334567889999999999999999999876443
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
...+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||
T Consensus 79 ------~~~~~lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~aL~~LH~-~~i~H~dlkp~nili~~~~~~~l 149 (284)
T cd05081 79 ------RRNLRLVMEYLPYGSLRDYLQKHRE--RLDHRKLLLYASQICKGMEYLGS-KRYVHRDLATRNILVESENRVKI 149 (284)
T ss_pred ------CCceEEEEEecCCCCHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCHhhEEECCCCeEEE
Confidence 34789999999 589999876431 12233455668999999999996 89999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----- 245 (771)
+|||++.......... ........+..|+|||+..+ ..++.++|+|||||++|||++|..++....
T Consensus 150 ~dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~ 220 (284)
T cd05081 150 GDFGLTKVLPQDKEYY---KVREPGESPIFWYAPESLTE------SKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMR 220 (284)
T ss_pred CCCcccccccCCCcce---eecCCCCCceEeeCHHHhcc------CCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhh
Confidence 9999998764321100 00011112336999999865 356778999999999999999764432110
Q ss_pred ------------------h------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 ------------------L------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 ------------------l------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
+ .....+|..+.+++.+|+..+|..||++.+++..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 221 MMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQ 279 (284)
T ss_pred hcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 0 0113466789999999999999999999998753
No 288
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.96 E-value=1.1e-28 Score=263.94 Aligned_cols=242 Identities=14% Similarity=0.142 Sum_probs=185.1
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCC----------------CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDG----------------SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP 79 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g----------------~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHP 79 (771)
..-+|++.+.||.|+ | .||.|++...+ ..|++|.+...... ...+.+.+|++++++++||
T Consensus 3 ~~~~~~~~~~lg~G~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~ 79 (296)
T cd05051 3 PRQPLNFVEKLGEGQFG--EVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD-NAREDFLKEVKILSRLSDP 79 (296)
T ss_pred chhhCcccccccCCCCc--cEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH-HHHHHHHHHHHHHHhcCCC
Confidence 345799999999998 8 89998876544 46899998764333 4566788999999999999
Q ss_pred CeeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCC--------CCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 004157 80 NILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------GSQRDEYYAWGLNQIAKAVSFLNNDCK 149 (771)
Q Consensus 80 nIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~--------~~~~~~~i~~gl~QI~~aL~fLH~~~~ 149 (771)
||+++++++..+ ...|+|||++ ++|..++...... .......+..++.|++.||.|||+ .+
T Consensus 80 ~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~-~~ 150 (296)
T cd05051 80 NIARLLGVCTVD--------PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES-LN 150 (296)
T ss_pred CEeEEEEEEecC--------CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH-cC
Confidence 999999998764 3789999999 5799988765411 122344566779999999999996 89
Q ss_pred ceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHH
Q 004157 150 LVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGC 229 (771)
Q Consensus 150 ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~ 229 (771)
++||||||+||+++.++.+||+|||++.......... .......+..|+|||++.+ ..++.++|+|||||
T Consensus 151 i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~ 220 (296)
T cd05051 151 FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYR----VQGRAPLPIRWMAWESVLL------GKFTTKSDVWAFGV 220 (296)
T ss_pred ccccccchhceeecCCCceEEccccceeecccCccee----ecCcCCCCceecCHHHhhc------CCCCccchhhhhHH
Confidence 9999999999999999999999999987654321100 0111122347999999875 35678999999999
Q ss_pred HHHHHhh--CCCCCChh---h-hh----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 230 LIYELFS--GMRLSKTE---E-LR----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 230 li~el~~--g~~p~~~~---~-l~----------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
++|||++ +..|+... + +. ....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 221 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~ 293 (296)
T cd05051 221 TLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLF 293 (296)
T ss_pred HHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHH
Confidence 9999998 44554321 1 11 112346789999999999999999999998753
No 289
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.96 E-value=9.8e-29 Score=259.60 Aligned_cols=236 Identities=17% Similarity=0.180 Sum_probs=183.6
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
+....|++.++||.|+ | .||+|..+ +++.|+||.+...... ...+.+|+..+++++||||+++++++..
T Consensus 3 ~~~~~~~~~~~ig~G~~g--~v~~~~~~-~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~---- 72 (260)
T cd05067 3 VPRETLKLVKKLGAGQFG--EVWMGYYN-GHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVTQ---- 72 (260)
T ss_pred cchHHceeeeeeccCccc--eEEeeecC-CCceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEcc----
Confidence 3456799999999998 8 99999865 6789999998754332 3467889999999999999999988743
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+||||+ ++|.+++...... ......+..++.|++.||.|||+ .+++||||+|+||+++.++.++|+|
T Consensus 73 -----~~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~i~~~i~~al~~LH~-~~i~H~dl~p~ni~i~~~~~~~l~d 145 (260)
T cd05067 73 -----EPIYIITEYMENGSLVDFLKTPEGI-KLTINKLIDMAAQIAEGMAFIER-KNYIHRDLRAANILVSETLCCKIAD 145 (260)
T ss_pred -----CCcEEEEEcCCCCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHhc-CCeecccccHHhEEEcCCCCEEEcc
Confidence 2689999999 5799888654321 12233455568999999999996 9999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----- 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----- 246 (771)
||++......... .......+..|+|||++.. ..++.++|+|||||++|++++ |..||.....
T Consensus 146 fg~~~~~~~~~~~-----~~~~~~~~~~y~~pe~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~ 214 (260)
T cd05067 146 FGLARLIEDNEYT-----AREGAKFPIKWTAPEAINY------GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQ 214 (260)
T ss_pred CcceeecCCCCcc-----cccCCcccccccCHHHhcc------CCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHH
Confidence 9998766532110 0111122347999999875 356678999999999999998 8888753211
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+|++.+|++||++++++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 215 NLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 111346678999999999999999999998875
No 290
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-29 Score=278.84 Aligned_cols=236 Identities=17% Similarity=0.190 Sum_probs=187.3
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
...++++||+|. | +||+|.+- ..||||+++.....+..++.++||+..||+-||-||+-|.+++-..
T Consensus 393 ev~l~~rIGsGsFG--tV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p------- 460 (678)
T KOG0193|consen 393 EVLLGERIGSGSFG--TVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP------- 460 (678)
T ss_pred Hhhccceecccccc--ceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC-------
Confidence 345788999998 9 99999985 4799999998888888999999999999999999999999999763
Q ss_pred ccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
.+.|||.+|+ +|+.+|....- ......+..++.||++|+.|||. .+|||+|||..|||+.+++.+||+|||++
T Consensus 461 --~~AIiTqwCeGsSLY~hlHv~et--kfdm~~~idIAqQiaqGM~YLHA-K~IIHrDLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 461 --PLAIITQWCEGSSLYTHLHVQET--KFDMNTTIDIAQQIAQGMDYLHA-KNIIHRDLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred --ceeeeehhccCchhhhhccchhh--hhhHHHHHHHHHHHHHhhhhhhh-hhhhhhhccccceEEccCCcEEEecccce
Confidence 3599999994 69988865431 11122355679999999999997 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------- 246 (771)
+...--... ..+.. ..+-..|||||++.-. + ...+++.+|+|+|||++|||++|.-|+..+..
T Consensus 536 tvk~~w~g~--~q~~q--p~gsilwmAPEvIRmq-d--~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG 608 (678)
T KOG0193|consen 536 TVKTRWSGE--QQLEQ--PHGSLLWMAPEVIRMQ-D--DNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRG 608 (678)
T ss_pred eeeeeeccc--cccCC--CccchhhhcHHHHhhc-c--cCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEeccc
Confidence 754321000 00100 1112379999999732 1 24678899999999999999999988753221
Q ss_pred -------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 -------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 -------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
....+.|+++.+++..|+..+++.||.+.++|.
T Consensus 609 ~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 609 YLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred ccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 122467889999999999999999999999876
No 291
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.96 E-value=1.3e-28 Score=266.19 Aligned_cols=244 Identities=15% Similarity=0.143 Sum_probs=189.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCC-CchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTN-AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~-~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
+...|+..+.+|.|+ | +||+|+++.+++.|+||.+.... ........+.+|+++++.++||||+++++++...
T Consensus 13 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 87 (308)
T cd06634 13 PEKLFSDLREIGHGSFG--AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE--- 87 (308)
T ss_pred cHHHHHHHHheeeCCCE--EEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC---
Confidence 455688888999987 7 99999999999999999987532 2223455677899999999999999999998863
Q ss_pred cCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 95 ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...|+||||+ ++|.+.+..... ......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+||
T Consensus 88 -----~~~~lv~e~~~~~l~~~~~~~~~--~l~~~~~~~~~~~l~~~l~~LH~-~~i~H~dl~p~nil~~~~~~~kl~df 159 (308)
T cd06634 88 -----HTAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHS-HNMIHRDVKAGNILLSEPGLVKLGDF 159 (308)
T ss_pred -----CeeEEEEEccCCCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCCHHhEEECCCCcEEECCc
Confidence 3789999999 567776654332 12344566779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hh--
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR-- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~-- 247 (771)
|++....... .......|+|||++.+.- ....+.++|+|||||++|+|++|..|+.... ..
T Consensus 160 g~~~~~~~~~----------~~~~~~~y~aPE~~~~~~---~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~ 226 (308)
T cd06634 160 GSASIMAPAN----------XFVGTPYWMAPEVILAMD---EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 226 (308)
T ss_pred ccceeecCcc----------cccCCccccCHHHHhhcc---cCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHH
Confidence 9987654311 112345799999974310 0235678999999999999999998764321 00
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+||++.++++|.++...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 227 AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred hhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 112466778899999999999999999999999655543
No 292
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.96 E-value=9.4e-29 Score=263.57 Aligned_cols=240 Identities=17% Similarity=0.192 Sum_probs=183.3
Q ss_pred CceecCCCCCCC-CceEEEEeEE----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTS----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~----k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
-|++.+.||+|+ | .||.+.. +.++..|+||.+.... .......+.+|++++++++||||+++++++...+
T Consensus 5 ~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 79 (284)
T cd05079 5 FLKRIRDLGEGHFG--KVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDG-- 79 (284)
T ss_pred hhhhceecCCCCce--eEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCC--
Confidence 378999999998 8 8998873 5678899999987543 2344567899999999999999999999987653
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
...+|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|
T Consensus 80 ----~~~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~i~~~i~~aL~~lH~-~gi~H~dlkp~Nil~~~~~~~~l~d 152 (284)
T cd05079 80 ----GNGIKLIMEFLPSGSLKEYLPRNKN--KINLKQQLKYAVQICKGMDYLGS-RQYVHRDLAARNVLVESEHQVKIGD 152 (284)
T ss_pred ----CCceEEEEEccCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeecccchheEEEcCCCCEEECC
Confidence 24789999999 579998866432 12334456679999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh--------
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-------- 244 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-------- 244 (771)
||++........... .......+..|+|||+..+ ..++.++|+|||||++|+++++..+....
T Consensus 153 fg~~~~~~~~~~~~~---~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~ 223 (284)
T cd05079 153 FGLTKAIETDKEYYT---VKDDLDSPVFWYAPECLIQ------SKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMI 223 (284)
T ss_pred CccccccccCcccee---ecCCCCCCccccCHHHhcc------CCCCccccchhhhhhhhhhhcCCCCCccccchhhhhc
Confidence 999887643211000 0011122347999998765 35667899999999999999865432110
Q ss_pred -----h---------------hhccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 245 -----E---------------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 245 -----~---------------l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. ......++..+.+++.+||+.+|.+||++.+++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 224 GPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred ccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 0 00123466789999999999999999999999864
No 293
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.96 E-value=9.8e-29 Score=262.50 Aligned_cols=243 Identities=17% Similarity=0.187 Sum_probs=187.9
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCC----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
...+|++.+.||.|+ | .||.|.++.+ +..|++|.+... ........+.+|+.++++|+||||+++++++..+
T Consensus 4 ~~~~~~~~~~i~~g~~g--~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 80 (280)
T cd05043 4 SRDRVTLSDLLQEGTFG--RIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED 80 (280)
T ss_pred chhheEEeeeecccCCc--eEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 346799999999998 8 9999998762 578999987643 3334567788999999999999999999987653
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCC-----CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLE-----GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ 164 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-----~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~ 164 (771)
....|+++|++ ++|.+++...... .......+..++.||+.||.|||+ .+++||||+|+||+++.
T Consensus 81 -------~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~i~H~di~p~nil~~~ 152 (280)
T cd05043 81 -------GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK-RGVIHKDIAARNCVIDE 152 (280)
T ss_pred -------CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccCHhhEEEcC
Confidence 23679999998 5799998765322 223344566779999999999996 89999999999999999
Q ss_pred CCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCCh
Q 004157 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKT 243 (771)
Q Consensus 165 ~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~ 243 (771)
++.+||+|||+++.+...... ...........|+|||++.+ ..++.++|+|||||++||+++ |..|+..
T Consensus 153 ~~~~kl~d~g~~~~~~~~~~~----~~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~ 222 (280)
T cd05043 153 ELQVKITDNALSRDLFPMDYH----CLGDNENRPVKWMALESLVN------KEYSSASDVWSFGVLLWELMTLGQTPYVE 222 (280)
T ss_pred CCcEEECCCCCcccccCCceE----EeCCCCCcchhccCHHHHhc------CCCCchhhHHHhHHHHHHHhcCCCCCcCc
Confidence 999999999999765432110 00011122347999999865 356788999999999999998 8887753
Q ss_pred hh---h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 244 EE---L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 244 ~~---l----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.. + .....+|..+.+++.+|+..+|++||++.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 272 (280)
T cd05043 223 IDPFEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQC 272 (280)
T ss_pred CCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 21 1 1113457889999999999999999999998753
No 294
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.96 E-value=1.4e-28 Score=258.24 Aligned_cols=236 Identities=17% Similarity=0.182 Sum_probs=184.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
...+|++.+.||.|+ | +||+|..+ ++..|+||.+...... ...+.+|+..+++++||||++++++++.+
T Consensus 4 ~~~~~~i~~~ig~g~~~--~v~~~~~~-~~~~~~vK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 73 (261)
T cd05034 4 PRESLKLERKLGAGQFG--EVWMGTWN-GTTKVAVKTLKPGTMS---PEAFLQEAQIMKKLRHDKLVQLYAVCSEE---- 73 (261)
T ss_pred chhheeeeeeeccCcce--EEEEEEEc-CCceEEEEEecCCccC---HHHHHHHHHHHhhCCCCCEeeeeeeeecC----
Confidence 456799999999998 8 99999976 5678999998754332 34678899999999999999999998763
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+|||++ ++|.+++..... .......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 74 ----~~~~~v~e~~~~~~L~~~i~~~~~-~~~~~~~~~~~~~~i~~al~~lh~-~~i~h~di~p~nili~~~~~~~l~d~ 147 (261)
T cd05034 74 ----EPIYIVTEYMSKGSLLDFLKSGEG-KKLRLPQLVDMAAQIAEGMAYLES-RNYIHRDLAARNILVGENLVCKIADF 147 (261)
T ss_pred ----CceEEEEeccCCCCHHHHHhcccc-CCCCHHHHHHHHHHHHHHHHHHHh-CCcccCCcchheEEEcCCCCEEECcc
Confidence 3789999999 579998876431 112344466779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----h-
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----R- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----~- 247 (771)
|++........ ........+..|+|||...+ ..++.++|+|||||++|++++ |..||..... .
T Consensus 148 g~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~ 216 (261)
T cd05034 148 GLARLIEDDEY-----TAREGAKFPIKWTAPEAANY------GRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQ 216 (261)
T ss_pred ccceeccchhh-----hhhhccCCCccccCHHHhcc------CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 99876643110 00111122347999999876 356678999999999999998 7777743221 1
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....|..+.+++.+||..+|.+||++.++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 217 VERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 11235778999999999999999999998764
No 295
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.96 E-value=1.2e-28 Score=258.13 Aligned_cols=231 Identities=18% Similarity=0.261 Sum_probs=184.4
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|++.+.+|.|. | .||+|... |+.|+||.+..... ..+.+.+|+.++++++||||+++++.+..+
T Consensus 5 ~~~~~~~~~ig~g~~g--~v~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 72 (256)
T cd05039 5 SKELKLGATIGKGEFG--DVMLGDYR--GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQG----- 72 (256)
T ss_pred hhhccceeeeecCCCc--eEEEEEec--CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCC-----
Confidence 34689999999998 8 99999875 89999999975432 456788999999999999999999998763
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
...|+||||+ ++|.++++..... ......+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||
T Consensus 73 ---~~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lh~-~~i~H~di~p~Nili~~~~~~~l~d~g 147 (256)
T cd05039 73 ---NPLYIVTEYMAKGSLVDYLRSRGRA-VITLAQQLGFALDVCEGMEYLEE-KNFVHRDLAARNVLVSEDLVAKVSDFG 147 (256)
T ss_pred ---CCeEEEEEecCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHh-CCccchhcccceEEEeCCCCEEEcccc
Confidence 3789999999 4799998765421 12344566679999999999996 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR------ 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~------ 247 (771)
++........ ....+..|+|||.+... .++.++|+|||||++|++++ |..|+......
T Consensus 148 ~~~~~~~~~~---------~~~~~~~~~ape~~~~~------~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~ 212 (256)
T cd05039 148 LAKEASQGQD---------SGKLPVKWTAPEALREK------KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHV 212 (256)
T ss_pred cccccccccc---------cCCCcccccCchhhcCC------cCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 9987643111 11223479999988652 45678999999999999997 77776432211
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|..+.+++.+||..+|.+||++.+++..
T Consensus 213 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 252 (256)
T cd05039 213 EKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQ 252 (256)
T ss_pred hcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 113467889999999999999999999998753
No 296
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.96 E-value=1.2e-28 Score=264.56 Aligned_cols=247 Identities=15% Similarity=0.138 Sum_probs=185.3
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEeccc
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~ 93 (771)
+.-..|++.+.+|.|. | +||+|+++.+++.|+||.+........ ...+..|+..+..+. ||||+++++++..+
T Consensus 12 ~~~~~~~~~~~lg~g~~~--~v~~~~~~~~~~~~avK~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~-- 86 (296)
T cd06618 12 ADLNDLENLGEIGSGTCG--QVYKMRFKKTGHVMAVKQMRRTGNKEE-NKRILMDLDVVLKSHDCPYIVKCYGYFITD-- 86 (296)
T ss_pred CCcchheeeeEeeccCCe--EEEEEEECCCCeEEEEEEEeccCChHH-HHHHHHHHHHHHhccCCCchHhhheeeecC--
Confidence 3445799999999997 7 999999999999999999986543332 334455666666665 99999999999863
Q ss_pred CcCCcccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 94 DATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+||||+. .|...+..... ......+..++.||+.||.|||+..+++||||+|+||+++.+|.+||+|
T Consensus 87 ------~~~~~v~e~~~~~l~~l~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~d 158 (296)
T cd06618 87 ------SDVFICMELMSTCLDKLLKRIQG--PIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCD 158 (296)
T ss_pred ------CeEEEEeeccCcCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECc
Confidence 47999999995 45555544321 2233445567999999999999646999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----hh
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----LR 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-----l~ 247 (771)
||++........ .........|+|||.+.+.-. ...++.++|+|||||++|+|++|..||.... +.
T Consensus 159 fg~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~--~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~ 229 (296)
T cd06618 159 FGISGRLVDSKA-------KTRSAGCAAYMAPERIDPPDP--NPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLT 229 (296)
T ss_pred cccchhccCCCc-------ccCCCCCccccCHhhcCCCCC--ccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHH
Confidence 999876543211 111123347999999864210 1235678999999999999999998875411 10
Q ss_pred -----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 -----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 -----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+.+++.+||+.+|.+||++.++++| +||.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~-~~~~ 277 (296)
T cd06618 230 KILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH-PFIR 277 (296)
T ss_pred HHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC-hhhh
Confidence 001356778999999999999999999999998 4443
No 297
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.96 E-value=1.6e-28 Score=256.26 Aligned_cols=235 Identities=17% Similarity=0.237 Sum_probs=185.3
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCC----CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDG----SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g----~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+++.+.+|.|+ | .||.+++...+ ..|++|++...... .....+.+|++.++.++||||+++++.+...
T Consensus 1 ~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 73 (258)
T smart00219 1 LTLGKKLGEGAFG--EVYKGTLKGLSGEKEVEVAVKTLKEDADE-QQIEEFLREARIMRKLDHPNIVKLLGVCTEE---- 73 (258)
T ss_pred CcccceeccCCCc--ceEEEEecCCCCCCCceEEEEEccCCCCh-HHHHHHHHHHHHHHhcCCCchheEEEEEcCC----
Confidence 46788999998 8 89999998766 89999999654322 2567888999999999999999999999864
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...|++||++ ++|.+++....... .....+..++.||+.||.|||+ .+++||||+|+||+++.+|.++|+||
T Consensus 74 ----~~~~~i~e~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~ql~~~l~~lh~-~~~~h~dl~~~nil~~~~~~~~l~df 147 (258)
T smart00219 74 ----EPLMIVMEYMEGGDLLDYLRKNRPKE-LSLSDLLSFALQIARGMEYLES-KNFIHRDLAARNCLVGENLVVKISDF 147 (258)
T ss_pred ----CeeEEEEeccCCCCHHHHHHhhhhcc-CCHHHHHHHHHHHHHHHHHHhc-CCeeecccccceEEEccCCeEEEccc
Confidence 3789999999 57998887643211 2344566779999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------ 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------ 246 (771)
|++.......... ......+..|++||...+ ..++.++|+|+|||++|+|++ |.+|+.....
T Consensus 148 g~~~~~~~~~~~~-----~~~~~~~~~y~~Pe~~~~------~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~ 216 (258)
T smart00219 148 GLSRDLYDDDYYK-----KKGGKLPIRWMAPESLKD------GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEY 216 (258)
T ss_pred CCceecccccccc-----cccCCCcccccChHHhcc------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 9997765431110 001123458999998854 356789999999999999998 6677643211
Q ss_pred -------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 -------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 -------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+||+.+|.+||++.++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 217 LKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 112346788999999999999999999999875
No 298
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.96 E-value=1.9e-28 Score=261.80 Aligned_cols=237 Identities=19% Similarity=0.233 Sum_probs=186.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|.-.+.||.|. | .||+|.++.+++.|+||+++.... ...+.+.+|+.+++.++||||+++++++...
T Consensus 20 ~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~------- 88 (285)
T cd06648 20 YLDNFVKIGEGSTG--IVCIATDKSTGRQVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHPNIVEMYSSYLVG------- 88 (285)
T ss_pred hhhcceEeccCCCe--EEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHHcCCCChheEEEEEEcC-------
Confidence 455556888887 7 999999999999999999875322 2345678999999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
.+.|+|+||+ ++|.+++..... ....+..++.||+.||.|||+ .+++||||+|+||+++.+|.++|+|||++
T Consensus 89 -~~~~~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~ql~~~l~~lH~-~~i~H~dl~p~Nil~~~~~~~~l~d~g~~ 162 (285)
T cd06648 89 -DELWVVMEFLEGGALTDIVTHTRM----NEEQIATVCLAVLKALSFLHA-QGVIHRDIKSDSILLTSDGRVKLSDFGFC 162 (285)
T ss_pred -CeEEEEEeccCCCCHHHHHHhCCC----CHHHHHHHHHHHHHHHHHHHh-CCeecCCCChhhEEEcCCCcEEEcccccc
Confidence 4889999999 479888877332 334456669999999999996 89999999999999999999999999988
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------- 246 (771)
......... .........|+|||...+ ..++.++|+|||||++|+|++|..||...+.
T Consensus 163 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~ 230 (285)
T cd06648 163 AQVSKEVPR------RKSLVGTPYWMAPEVISR------LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN 230 (285)
T ss_pred hhhccCCcc------cccccCCccccCHHHhcC------CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc
Confidence 755331110 111233457999999865 3466789999999999999999988743211
Q ss_pred -----hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 -----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 -----~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.....++..+.+++.+||+.+|.+||++.++++| +||.+
T Consensus 231 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~-~~~~~ 274 (285)
T cd06648 231 LPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH-PFLAK 274 (285)
T ss_pred CCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccC-ccccc
Confidence 1112366789999999999999999999999998 56643
No 299
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.96 E-value=1.1e-28 Score=264.52 Aligned_cols=240 Identities=14% Similarity=0.163 Sum_probs=182.3
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCC--------------CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCe
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDG--------------SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNI 81 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g--------------~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnI 81 (771)
+..+|++.++||.|+ | .||.+++...+ ..|+||.+..... ......+.+|++.+++++||||
T Consensus 3 ~~~~~~~~~~lg~G~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~ei~~l~~l~h~~i 79 (295)
T cd05097 3 PRQQLRLKEKLGEGQFG--EVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT-KTARNDFLKEIKIMSRLKNPNI 79 (295)
T ss_pred chHhCeehhccCCCCCc--eEEecccccchhhccccCcccCCCceEEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCc
Confidence 456799999999999 8 89999875432 2489999875432 3345678899999999999999
Q ss_pred eEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCC---------CCCcHHHHHHHHHHHHHHHHHHHcCCCc
Q 004157 82 LAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE---------GSQRDEYYAWGLNQIAKAVSFLNNDCKL 150 (771)
Q Consensus 82 lkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~---------~~~~~~~i~~gl~QI~~aL~fLH~~~~i 150 (771)
+++++++... ..+|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .++
T Consensus 80 ~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i 150 (295)
T cd05097 80 IRLLGVCVSD--------DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS-LNF 150 (295)
T ss_pred CeEEEEEcCC--------CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh-cCe
Confidence 9999999763 3789999999 4798888654311 012334466679999999999996 899
Q ss_pred eecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccc-cccCCCCCChhccccccccccCCCCCcchHHHHHH
Q 004157 151 VHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA-WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGC 229 (771)
Q Consensus 151 vH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~-~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~ 229 (771)
+||||||+||+++.++.+||+|||++........ ..... ...+..|+|||+..+ ..++.++|+|||||
T Consensus 151 ~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwSlG~ 219 (295)
T cd05097 151 VHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMAWESILL------GKFTTASDVWAFGV 219 (295)
T ss_pred eccccChhhEEEcCCCcEEecccccccccccCcc-----eeccCcCcCceeecChhhhcc------CCcCchhhHHHHHH
Confidence 9999999999999999999999999876543211 00111 122347999998765 35678999999999
Q ss_pred HHHHHhh--CCCCCChh---h-h-----------h-----ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 230 LIYELFS--GMRLSKTE---E-L-----------R-----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 230 li~el~~--g~~p~~~~---~-l-----------~-----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
++|+|++ +..+|... . . . ....+|..+.+++.+|+..+|.+||++.++++
T Consensus 220 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 220 TLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 9999998 44455321 1 0 0 01235778999999999999999999999865
No 300
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.96 E-value=8.8e-29 Score=262.85 Aligned_cols=237 Identities=18% Similarity=0.222 Sum_probs=184.7
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~~ 98 (771)
|++.+.||.|+ | +||+|+.+.+++.|+||.+....... ......+|+..+++++ ||||+++++.++..
T Consensus 1 y~~~~~ig~g~~g--~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~------- 70 (283)
T cd07830 1 YKVIKQLGDGTFG--SVYLARNKETGELVAIKKMKKKFYSW-EECMNLREVKSLRKLNEHPNIVKLKEVFREN------- 70 (283)
T ss_pred CeeheeeccCCce--EEEEEEECCCCcEEEEEEehhhccch-hHHHHHHHHHHHHhccCCCCchhHHHHhhcC-------
Confidence 78899999998 8 99999999899999999987643322 2223456899999999 99999999999863
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...|+||||+ ++|.+++..... .......+..++.||+.+|.|||+ ++++|+||+|+||+++.+|.++|+|||++.
T Consensus 71 -~~~~lv~e~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~-~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~ 147 (283)
T cd07830 71 -DELYFVFEYMEGNLYQLMKDRKG-KPFSESVIRSIIYQILQGLAHIHK-HGFFHRDLKPENLLVSGPEVVKIADFGLAR 147 (283)
T ss_pred -CcEEEEEecCCCCHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCChhhEEEcCCCCEEEeecccce
Confidence 4889999999 578888876541 112344466679999999999996 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R------ 247 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~------ 247 (771)
....... .........|+|||++... ..++.++|+||||+++|+|++|.++|..... .
T Consensus 148 ~~~~~~~-------~~~~~~~~~~~aPE~~~~~-----~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~ 215 (283)
T cd07830 148 EIRSRPP-------YTDYVSTRWYRAPEILLRS-----TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVL 215 (283)
T ss_pred eccCCCC-------cCCCCCcccccCceeeecC-----cCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhc
Confidence 6643211 1112334579999987543 3456789999999999999999887742110 0
Q ss_pred --------------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 --------------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 --------------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
.....+..+.+++.+|+..+|.+||++.+++.|++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~ 282 (283)
T cd07830 216 GTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPY 282 (283)
T ss_pred CCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCC
Confidence 00123466889999999999999999999999843
No 301
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.96 E-value=1.7e-28 Score=261.25 Aligned_cols=239 Identities=15% Similarity=0.194 Sum_probs=184.3
Q ss_pred CCCceecCCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
..+|.+.+++|.|+ | +||.+... .++..|++|.+... .......+.+|++.++.++||||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (280)
T cd05092 4 RRDIVLKWELGEGAFG--KVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTEG 79 (280)
T ss_pred hHhceeccccCCccCC--eEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC
Confidence 45688899999998 8 99999743 34678999987643 234456789999999999999999999998763
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCC------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCC
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLE------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL 157 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp 157 (771)
...|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||
T Consensus 80 --------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~~i~H~dlkp 150 (280)
T cd05092 80 --------RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS-LHFVHRDLAT 150 (280)
T ss_pred --------CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH-CCeecccccH
Confidence 3789999999 5799988764311 112234466679999999999996 9999999999
Q ss_pred CCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-
Q 004157 158 SSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS- 236 (771)
Q Consensus 158 ~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~- 236 (771)
+||+++.++.+||+|||++.......... .......+..|+|||+..+ ..++.++|+|||||++|||++
T Consensus 151 ~nil~~~~~~~kL~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~~~ 220 (280)
T cd05092 151 RNCLVGQGLVVKIGDFGMSRDIYSTDYYR----VGGRTMLPIRWMPPESILY------RKFTTESDIWSFGVVLWEIFTY 220 (280)
T ss_pred hhEEEcCCCCEEECCCCceeEcCCCceee----cCCCccccccccCHHHhcc------CCcCchhhHHHHHHHHHHHHcC
Confidence 99999999999999999987654321000 0011122457999998876 356788999999999999998
Q ss_pred CCCCCChhh-------------hhccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 237 GMRLSKTEE-------------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 237 g~~p~~~~~-------------l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
|.+||.... ......+|..+.+++.+||..+|.+||++.+++.
T Consensus 221 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 221 GKQPWYQLSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred CCCCCccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 777763211 1112457888999999999999999999999875
No 302
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.96 E-value=1.4e-28 Score=260.21 Aligned_cols=230 Identities=13% Similarity=0.176 Sum_probs=176.5
Q ss_pred CCCCCC-CceEEEEeEECCCCC--cEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcCCcccE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGS--PVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~--~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
.+|.|+ | .||+|+.+.++. .+++|.+.... .....+.+.+|++.++++ +||||+++++.++.. ..
T Consensus 2 ~lg~g~~g--~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--------~~ 70 (270)
T cd05047 2 VIGEGNFG--QVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--------GY 70 (270)
T ss_pred cCCCCCCc--eEEEEEEcCCCCeeEEEEEEccccC-CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC--------CC
Confidence 578887 8 999999988876 45778776322 223456788999999999 799999999999764 36
Q ss_pred EEEEecCC--cchHHHHHHhCCC-------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC
Q 004157 102 IYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G 166 (771)
+|+||||+ ++|.+++...... .......+.+++.|++.||.|||+ .+++||||||+||+++.++
T Consensus 71 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~-~~i~H~dikp~nili~~~~ 149 (270)
T cd05047 71 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARNILVGENY 149 (270)
T ss_pred ceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH-CCEeecccccceEEEcCCC
Confidence 89999999 5899999764321 112345577789999999999996 9999999999999999999
Q ss_pred cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh
Q 004157 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE 245 (771)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~ 245 (771)
.+||+|||++....... .......+..|+|||+..+ ..++.++|+|||||++|||++ |..||....
T Consensus 150 ~~kl~dfgl~~~~~~~~-------~~~~~~~~~~y~apE~~~~------~~~~~~~Di~slG~il~el~~~g~~pf~~~~ 216 (270)
T cd05047 150 VAKIADFGLSRGQEVYV-------KKTMGRLPVRWMAIESLNY------SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 216 (270)
T ss_pred eEEECCCCCccccchhh-------hccCCCCccccCChHHHcc------CCCCchhhHHHHHHHHHHHHcCCCCCccccC
Confidence 99999999975332110 0111112346999998865 356779999999999999997 887774321
Q ss_pred h-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 L-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. .....++..+.+++.+|+..+|.+||++.+++..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 264 (270)
T cd05047 217 CAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 264 (270)
T ss_pred HHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 1 1123456778999999999999999999998764
No 303
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.96 E-value=1.5e-28 Score=259.51 Aligned_cols=238 Identities=17% Similarity=0.182 Sum_probs=183.6
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
.+|++++.+|.|. | .||+|+++.++. .|+||.+..... +...+.+.+|+..+++++||||+++++++..+
T Consensus 4 ~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 77 (267)
T cd05066 4 SCIKIEKVIGAGEFG--EVCSGRLKLPGKREIPVAIKTLKAGYT-EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS--- 77 (267)
T ss_pred HHeEeeeeecccCCC--ceEEEEEecCCCCceEEEEEECCCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecC---
Confidence 4689999999998 8 899999875554 699999875432 33456788999999999999999999998753
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
...|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|
T Consensus 78 -----~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~-~~i~h~dlkp~nili~~~~~~~l~d 149 (267)
T cd05066 78 -----KPVMIVTEYMENGSLDAFLRKHDG--QFTVIQLVGMLRGIASGMKYLSD-MGYVHRDLAARNILVNSNLVCKVSD 149 (267)
T ss_pred -----CccEEEEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEeehhhchhcEEECCCCeEEeCC
Confidence 3789999999 479998876532 12333455668999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----- 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----- 246 (771)
||++......... .........+..|++||++.+ ..++.++|+|+|||++|++++ |..|+.....
T Consensus 150 fg~~~~~~~~~~~---~~~~~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~ 220 (267)
T cd05066 150 FGLSRVLEDDPEA---AYTTRGGKIPIRWTAPEAIAY------RKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIK 220 (267)
T ss_pred CCcccccccccce---eeecCCCccceeecCHhHhcc------CccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHH
Confidence 9999876542110 000111112237999999875 356779999999999999886 8877643211
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+|++.+|.+||++.++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 221 AIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred HHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 111345778999999999999999999998875
No 304
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.96 E-value=1.8e-28 Score=258.52 Aligned_cols=239 Identities=15% Similarity=0.188 Sum_probs=183.3
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
..|+..+.+|.|+ | .||+|+.+.++. .|+||++..... ....+.+.+|++.+++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 78 (268)
T cd05063 5 SHITKQKVIGAGEFG--EVFRGILKMPGRKEVAVAIKTLKPGYT-EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKF--- 78 (268)
T ss_pred HHceEeeEecCCCCc--cEEEEEEecCCCCceEEEEEeccccCC-HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccC---
Confidence 3688899999997 7 899999987665 689998865432 33456788999999999999999999999763
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
..+|+||||+ ++|.+++..... ......+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|
T Consensus 79 -----~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~al~~lH~-~~i~H~dlkp~Nili~~~~~~kl~d 150 (268)
T cd05063 79 -----KPAMIITEYMENGALDKYLRDHDG--EFSSYQLVGMLRGIAAGMKYLSD-MNYVHRDLAARNILVNSNLECKVSD 150 (268)
T ss_pred -----CCcEEEEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeccccchhhEEEcCCCcEEECC
Confidence 3789999999 479888876431 12233345568999999999996 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh----hh
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----LR 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~----l~ 247 (771)
||++.......... ........+..|+|||++.+ ..++.++|+|||||++||+++ |..|+.... ..
T Consensus 151 fg~~~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~------~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~ 221 (268)
T cd05063 151 FGLSRVLEDDPEGT---YTTSGGKIPIRWTAPEAIAY------RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMK 221 (268)
T ss_pred Cccceecccccccc---eeccCCCcCceecCHHHhhc------CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHH
Confidence 99987664321110 00111112336999998865 356678999999999999987 887764211 11
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|..+.+++.+|+..+|..||+..++++.
T Consensus 222 ~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~ 263 (268)
T cd05063 222 AINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNL 263 (268)
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 113457788999999999999999999998753
No 305
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.96 E-value=1.4e-28 Score=258.71 Aligned_cols=235 Identities=17% Similarity=0.169 Sum_probs=180.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+.-+|++.+.||.|+ | +||+|.+..+ ..|+||.+..... ..+.+.+|++++++++||||+++++++..
T Consensus 4 ~~~~~~~~~~ig~g~~~--~v~~~~~~~~-~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 72 (260)
T cd05069 4 PRESLRLDVKLGQGCFG--EVWMGTWNGT-TKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVSE----- 72 (260)
T ss_pred ChHHeeeeeeecCcCCC--eEEEEEEcCC-ceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEcC-----
Confidence 345799999999998 8 9999987654 4699998764322 23567889999999999999999988753
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 73 ----~~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~al~~lH~-~~i~H~dl~~~Nill~~~~~~~l~df 146 (260)
T cd05069 73 ----EPIYIVTEFMGKGSLLDFLKEGDGK-YLKLPQLVDMAAQIADGMAYIER-MNYIHRDLRAANILVGDNLVCKIADF 146 (260)
T ss_pred ----CCcEEEEEcCCCCCHHHHHhhCCCC-CCCHHHHHHHHHHHHHHHHHHHh-CCEeecccCcceEEEcCCCeEEECCC
Confidence 2579999999 4799998764321 12334456669999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------ 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------ 246 (771)
|++......... .......+..|++||+..+ ..++.++|+|||||++|++++ |..|+.....
T Consensus 147 g~~~~~~~~~~~-----~~~~~~~~~~y~~Pe~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~ 215 (260)
T cd05069 147 GLARLIEDNEYT-----ARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQ 215 (260)
T ss_pred ccceEccCCccc-----ccCCCccchhhCCHHHhcc------CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999765432110 0111123347999998765 356678999999999999998 7777643211
Q ss_pred -h------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 -R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 -~------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
. ....+|..+.+++.+||..+|.+||++.++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 216 VERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0 11346778999999999999999999988764
No 306
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.96 E-value=1.1e-28 Score=259.13 Aligned_cols=231 Identities=18% Similarity=0.256 Sum_probs=177.7
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHH-HHhcCCCCCeeEEeeeEEecccCcCCcccE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVK-RLRTVRHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~-~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
+.+|.|. | .||+|+++.+|+.|+||++.+..... ........|.. ..+.++||||+++++.++.. ..
T Consensus 2 ~~l~~g~~~--~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--------~~ 71 (260)
T cd05611 2 KPISKGAFG--SVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSK--------DY 71 (260)
T ss_pred ccCCcCCCe--eEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcC--------Ce
Confidence 4678887 8 99999999999999999997543211 22223344444 34556899999999999863 48
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+|+||||+ ++|..+++.... .....+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++...
T Consensus 72 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~lH~-~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 72 LYLVMEYLNGGDCASLIKTLGG---LPEDWAKQYIAEVVLGVEDLHQ-RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred EEEEEeccCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 99999999 579998876542 2344566779999999999996 89999999999999999999999999988754
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------ 247 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------ 247 (771)
.... .......|++||...+. .++.++|+|+||+++|++++|..|+......
T Consensus 148 ~~~~----------~~~~~~~y~~pe~~~~~------~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 211 (260)
T cd05611 148 LENK----------KFVGTPDYLAPETILGV------GDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRIN 211 (260)
T ss_pred cccc----------cCCCCcCccChhhhcCC------CCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccC
Confidence 3210 11233479999998763 4667999999999999999999887532211
Q ss_pred ----ccCCCCcchHHHHHHHhccCCCCCCCh---HHHhhCCCCCcc
Q 004157 248 ----NTASIPKSLLPDYQRLLSSMPSRRLNS---SKLIENSEYFQN 286 (771)
Q Consensus 248 ----~~~~IP~~l~~~i~~lL~~~P~~Rps~---~~lL~~~~fF~n 286 (771)
....+|..+.+++.+||+.+|..||++ .+++.| +||.+
T Consensus 212 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~-~~~~~ 256 (260)
T cd05611 212 WPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH-PFFKS 256 (260)
T ss_pred CCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC-hHhhc
Confidence 012468889999999999999999954 788888 55543
No 307
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=1.8e-28 Score=265.75 Aligned_cols=242 Identities=16% Similarity=0.231 Sum_probs=183.3
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEEC-------CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeee
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-------DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHS 87 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k-------~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~ 87 (771)
+..+|.+++.||.|+ | .||.|+.. ..+..|++|.+..... ......+.+|+++++.+ +||||++++++
T Consensus 10 ~~~~~~~~~~lg~G~~g--~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (314)
T cd05099 10 PRDRLVLGKPLGEGCFG--QVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT-DKDLADLISEMELMKLIGKHKNIINLLGV 86 (314)
T ss_pred cHHHeeeeeeecCCCcc--cEEEeeecccCCccCCcceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence 445799999999998 8 89999753 2345799999875433 23456788899999999 69999999999
Q ss_pred EEecccCcCCcccEEEEEecCC--cchHHHHHHhCCC-------------CCCcHHHHHHHHHHHHHHHHHHHcCCCcee
Q 004157 88 TEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152 (771)
Q Consensus 88 ~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH 152 (771)
+... ..+|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|
T Consensus 87 ~~~~--------~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~gi~H 157 (314)
T cd05099 87 CTQE--------GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES-RRCIH 157 (314)
T ss_pred EccC--------CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH-CCeee
Confidence 8753 3789999999 5799999764310 112233355568999999999996 89999
Q ss_pred cCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHH
Q 004157 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (771)
Q Consensus 153 ~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~ 232 (771)
|||||+||+++.+|.+||+|||+++.......... ......+..|+|||++.+ ..++.++|+|||||++|
T Consensus 158 ~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~~l~ 227 (314)
T cd05099 158 RDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKK----TSNGRLPVKWMAPEALFD------RVYTHQSDVWSFGILMW 227 (314)
T ss_pred ccccceeEEEcCCCcEEEccccccccccccccccc----cccCCCCccccCHHHHcc------CCcCccchhhHHHHHHH
Confidence 99999999999999999999999986643211000 011112246999999865 35677899999999999
Q ss_pred HHhh-CCCCCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 233 ELFS-GMRLSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 233 el~~-g~~p~~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
++++ |..||..... .....+|..+.+++.+||+.+|..||++.++++.
T Consensus 228 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 289 (314)
T cd05099 228 EIFTLGGSPYPGIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEA 289 (314)
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 9998 6666643211 1123456789999999999999999999998753
No 308
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=1.4e-28 Score=265.58 Aligned_cols=241 Identities=15% Similarity=0.231 Sum_probs=183.6
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECC-------CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeE
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-------DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHST 88 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~-------~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~ 88 (771)
..+|.+++.||+|+ | .||.+.++. ++..|++|.+.... .......+.+|+..++++ +||||+++++++
T Consensus 17 ~~~~~i~~~lg~G~~g--~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (307)
T cd05098 17 RDRLVLGKPLGEGCFG--QVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGAC 93 (307)
T ss_pred hHHeEEeeeeccCCCe--eEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 35699999999998 8 899998643 23569999987542 233456688899999999 799999999998
Q ss_pred EecccCcCCcccEEEEEecCC--cchHHHHHHhCCC-------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceec
Q 004157 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHG 153 (771)
Q Consensus 89 e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~ 153 (771)
... ..+|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||
T Consensus 94 ~~~--------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~gi~H~ 164 (307)
T cd05098 94 TQD--------GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS-KKCIHR 164 (307)
T ss_pred ecC--------CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH-CCcccc
Confidence 764 3789999999 5899999764321 112234456679999999999996 899999
Q ss_pred CCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHH
Q 004157 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYE 233 (771)
Q Consensus 154 dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~e 233 (771)
||||+||+++.++.+||+|||++........... ......+..|+|||++.+ ..++.++|+|||||++|+
T Consensus 165 dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~~l~e 234 (307)
T cd05098 165 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK----TTNGRLPVKWMAPEALFD------RIYTHQSDVWSFGVLLWE 234 (307)
T ss_pred cccHHheEEcCCCcEEECCCcccccccccchhhc----cccCCCccceeChHHhcc------CCCCcHHHHHHHHHHHHH
Confidence 9999999999999999999999876543211000 011112247999998865 356678999999999999
Q ss_pred Hhh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 234 LFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 234 l~~-g~~p~~~~~l~-------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
|++ |..|+...... ....++..+.+++.+||..+|.+||++.++++.
T Consensus 235 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 235 IFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHcCCCCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 998 66666432211 113456788999999999999999999999864
No 309
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.96 E-value=1.6e-28 Score=257.90 Aligned_cols=235 Identities=16% Similarity=0.163 Sum_probs=181.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
....|++.+++|.|+ | +||+|... ++..|++|.+...... .+.+++|+.++++++||||+++++.+..
T Consensus 4 ~~~~~~~~~~ig~g~~~--~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~~----- 72 (260)
T cd05070 4 PRESLQLIKKLGNGQFG--EVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVSE----- 72 (260)
T ss_pred chHHhhhhheeccccCc--eEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEECC-----
Confidence 345799999999998 8 99999876 6678999998764332 3458899999999999999999998753
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|.+++...... ......+..++.|++.||.|||+ .+++||||+|+||+++.++..||+||
T Consensus 73 ----~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~al~~lH~-~~i~H~di~p~Nili~~~~~~~l~df 146 (260)
T cd05070 73 ----EPIYIVTEYMSKGSLLDFLKDGEGR-ALKLPNLVDMAAQVAAGMAYIER-MNYIHRDLRSANILVGDGLVCKIADF 146 (260)
T ss_pred ----CCcEEEEEecCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHH-CCcccCCCccceEEEeCCceEEeCCc
Confidence 2579999999 4799988764321 12334456669999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----h-
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL----R- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l----~- 247 (771)
|++......... .......+..|+|||+..+ ..++.++|+|||||++|++++ |.+||..... .
T Consensus 147 g~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~ 215 (260)
T cd05070 147 GLARLIEDNEYT-----ARQGAKFPIKWTAPEAALY------GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQ 215 (260)
T ss_pred eeeeeccCcccc-----cccCCCCCccccChHHHhc------CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 999765432110 0111223447999998765 356679999999999999998 7777743221 1
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....|..+.+++.+|+..+|.+||++.++.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 216 VERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred HHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 11235677899999999999999999988754
No 310
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.96 E-value=4.4e-29 Score=267.91 Aligned_cols=236 Identities=18% Similarity=0.225 Sum_probs=186.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|.....||.|+ | .||.+.+..++..|+||++.... ....+.+.+|+..++.++||||+++++.+...
T Consensus 23 ~~~~~~~lg~g~~g--~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~------- 91 (292)
T cd06658 23 YLDSFIKIGEGSTG--IVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLVG------- 91 (292)
T ss_pred HHhhhhcccCCCCe--EEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheecC-------
Confidence 466667889888 8 89999999999999999987532 23456688999999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...|+||||+ ++|.+++..... ....+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 92 -~~~~lv~e~~~~~~L~~~~~~~~l----~~~~~~~~~~qi~~~l~~LH~-~~ivH~dlkp~Nill~~~~~~kL~dfg~~ 165 (292)
T cd06658 92 -DELWVVMEFLEGGALTDIVTHTRM----NEEQIATVCLSVLRALSYLHN-QGVIHRDIKSDSILLTSDGRIKLSDFGFC 165 (292)
T ss_pred -CeEEEEEeCCCCCcHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEcCCCCEEEccCcch
Confidence 4889999999 468887755332 234466779999999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----h-----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL----R----- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l----~----- 247 (771)
......... ......+..|+|||+..+ ..++.++|+|||||++||+++|..|+..... .
T Consensus 166 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~ 233 (292)
T cd06658 166 AQVSKEVPK------RKSLVGTPYWMAPEVISR------LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDN 233 (292)
T ss_pred hhccccccc------CceeecCccccCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence 765432110 111233458999999865 3566789999999999999999988753221 0
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
....++..+..++.+|+..+|.+||++.++++| +||.
T Consensus 234 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~-~~~~ 276 (292)
T cd06658 234 LPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH-PFLK 276 (292)
T ss_pred CCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhC-hhhh
Confidence 112355668889999999999999999999998 5553
No 311
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.96 E-value=1.6e-28 Score=260.03 Aligned_cols=241 Identities=16% Similarity=0.182 Sum_probs=185.3
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEe
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~ 90 (771)
+..+|++.+.+|.|+ | +||.|+.+.+ ...|++|.+..... ......+++|+++|++++||||+++++++..
T Consensus 3 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 79 (275)
T cd05046 3 PRSNLQEITTLGRGEFG--EVFLAKAKGIEEEGGETLVLVKALQKTKD-ENLQSEFRRELDMFRKLSHKNVVRLLGLCRE 79 (275)
T ss_pred ChHhceeeeeeccccee--EEEEEEeccCCcCCCcceEEEEccCCccc-hHHHHHHHHHHHHHHhcCCcceeeeEEEECC
Confidence 345799999999997 7 9999997643 46799998875322 2356678999999999999999999998875
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCCC------CCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEG------SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~------~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v 162 (771)
. ...|+||||+ ++|.+++....... ......+..++.||+.||.|||+ ++++||||||+||++
T Consensus 80 ~--------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~-~~i~H~dlkp~Nili 150 (275)
T cd05046 80 A--------EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN-ARFVHRDLAARNCLV 150 (275)
T ss_pred C--------CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh-cCcccCcCccceEEE
Confidence 3 3789999999 58999987654211 23445567779999999999996 899999999999999
Q ss_pred cCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCC
Q 004157 163 TQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLS 241 (771)
Q Consensus 163 ~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~ 241 (771)
+.+|.+||+|||++........ ........+..|++||.+.+ .....++|+|||||++|++++ |..+|
T Consensus 151 ~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~~l~~~~~~p~ 219 (275)
T cd05046 151 SSQREVKVSLLSLSKDVYNSEY-----YKLRNALIPLRWLAPEAVQE------DDFSTKSDVWSFGVLMWEVFTQGELPF 219 (275)
T ss_pred eCCCcEEEcccccccccCcccc-----cccCCceeEEeecChhhhcc------CCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence 9999999999999865432110 00111123447999998765 245678999999999999998 55565
Q ss_pred Chhh--------------hhccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 242 KTEE--------------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 242 ~~~~--------------l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.... ......+|..+.+++.+||+.+|.+||++.+++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 220 YGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred cccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 3211 01124567889999999999999999999998864
No 312
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.96 E-value=2e-28 Score=261.80 Aligned_cols=240 Identities=14% Similarity=0.167 Sum_probs=182.5
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
..+|++.+.||.|+ | .||+|+.+. .+..|+||.+...... .....+.+|+..++.++||||+++++++...
T Consensus 5 ~~~~~i~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 5 REKITLLRELGQGSFG--MVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred HHHceeeeeecCCCCc--EEEEEEEeccCCCCcceEEEEEECCCcCCH-HHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 45799999999998 8 999997653 3458999998754322 2344578899999999999999999998753
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCC-------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v 162 (771)
...|+||||+ ++|.++++..... .......+..++.||+.||.|||+ .+++||||||+||++
T Consensus 82 --------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dikp~nili 152 (288)
T cd05061 82 --------QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA-KKFVHRDLAARNCMV 152 (288)
T ss_pred --------CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcCCCCChheEEE
Confidence 3789999999 6899999764321 111233455669999999999996 899999999999999
Q ss_pred cCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCC
Q 004157 163 TQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLS 241 (771)
Q Consensus 163 ~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~ 241 (771)
+.++.+||+|||+++.......... ......+..|+|||.+.+ ..++.++|+|||||++||+++ |..|+
T Consensus 153 ~~~~~~~L~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~~pE~~~~------~~~~~~~DvwslG~~l~el~~~~~~p~ 222 (288)
T cd05061 153 AHDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPESLKD------GVFTTSSDMWSFGVVLWEITSLAEQPY 222 (288)
T ss_pred cCCCcEEECcCCccccccccccccc----cCCCcccccccCHHHhcc------CCCChHhHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999876543211000 011122347999999865 356678999999999999998 56666
Q ss_pred Chhh---h----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 242 KTEE---L----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 242 ~~~~---l----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.... . .....+|..+.+++.+||+.+|.+||++.++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 273 (288)
T cd05061 223 QGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVN 273 (288)
T ss_pred CCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 4311 1 111345778999999999999999999999875
No 313
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.96 E-value=1.7e-28 Score=255.31 Aligned_cols=230 Identities=17% Similarity=0.231 Sum_probs=183.4
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
+|.|+ | .||.++++.+++.|+||++.+..... .....+.+|++.++.++||||+++++.++.+ ..+|+
T Consensus 1 lg~G~~~--~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~~~~ 70 (250)
T cd05123 1 LGKGSFG--KVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTE--------EKLYL 70 (250)
T ss_pred CCCCCce--EEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecC--------CeeEE
Confidence 45665 6 99999999899999999998654322 3466788999999999999999999998763 48999
Q ss_pred EecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCC
Q 004157 105 VTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGN 182 (771)
Q Consensus 105 VtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~ 182 (771)
|||++ ++|.+++..... .....+..++.||+.||.|||+ .+++|+||+|+||+++.+|.++|+|||++......
T Consensus 71 v~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lh~-~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 71 VLEYAPGGELFSHLSKEGR---FSEERARFYAAEIVLALEYLHS-LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSE 146 (250)
T ss_pred EEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCceecCCCcceEEEcCCCcEEEeecCcceecccC
Confidence 99999 479988877542 2344566779999999999996 99999999999999999999999999998776542
Q ss_pred CCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh------------ccC
Q 004157 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR------------NTA 250 (771)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~------------~~~ 250 (771)
... .........|++||...+. ..+.++|+|+|||++|++++|..||...+.. ...
T Consensus 147 ~~~------~~~~~~~~~~~~Pe~~~~~------~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 214 (250)
T cd05123 147 GSR------TNTFCGTPEYLAPEVLLGK------GYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPE 214 (250)
T ss_pred CCc------ccCCcCCccccChHHhCCC------CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCC
Confidence 110 1112234479999998652 4567899999999999999999887543211 113
Q ss_pred CCCcchHHHHHHHhccCCCCCCCh---HHHhhCCC
Q 004157 251 SIPKSLLPDYQRLLSSMPSRRLNS---SKLIENSE 282 (771)
Q Consensus 251 ~IP~~l~~~i~~lL~~~P~~Rps~---~~lL~~~~ 282 (771)
.+|..+.+++++||..+|..||++ .++++|++
T Consensus 215 ~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~ 249 (250)
T cd05123 215 FLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPF 249 (250)
T ss_pred CCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCC
Confidence 457789999999999999999999 89988843
No 314
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.96 E-value=3e-28 Score=254.11 Aligned_cols=231 Identities=16% Similarity=0.181 Sum_probs=178.3
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iy 103 (771)
++||.|+ | .||++.+.. ++.|+||++...... .....+++|+++++.+.||||+++++++... ...|
T Consensus 1 ~~lg~g~~g--~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------~~~~ 68 (251)
T cd05041 1 EKIGKGNFG--DVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQK--------QPIY 68 (251)
T ss_pred CccccCCCc--eEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecC--------CCeE
Confidence 3678887 7 999999887 999999998765333 3456788999999999999999999998864 3789
Q ss_pred EEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
+|+||+ ++|.+++..... ......+...+.|++.||.|||+ .+++||||+|+||+++.++.+||+|||++.....
T Consensus 69 ~v~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~lH~-~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~ 145 (251)
T cd05041 69 IVMELVPGGSLLTFLRKKKN--RLTVKKLLQMSLDAAAGMEYLES-KNCIHRDLAARNCLVGENNVLKISDFGMSREEEG 145 (251)
T ss_pred EEEEcCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCEehhhcCcceEEEcCCCcEEEeeccccccccC
Confidence 999999 579888866432 12344455668899999999996 8999999999999999999999999999876542
Q ss_pred CCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh-------hh------
Q 004157 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE-------LR------ 247 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~-------l~------ 247 (771)
...... ......+..|+|||.+.+ ..++.++|+|||||++|++++ |..|+.... ..
T Consensus 146 ~~~~~~----~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~ 215 (251)
T cd05041 146 GIYTVS----DGLKQIPIKWTAPEALNY------GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMP 215 (251)
T ss_pred Ccceec----cccCcceeccCChHhhcc------CCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCC
Confidence 111000 000112346999999865 356788999999999999998 666664321 11
Q ss_pred ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|..+.+++.+|+..+|.+||++.++++.
T Consensus 216 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~ 248 (251)
T cd05041 216 APQLCPEEIYRLMLQCWAYDPENRPSFSEIYNE 248 (251)
T ss_pred CCccCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 112456789999999999999999999998863
No 315
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=1.5e-28 Score=264.73 Aligned_cols=242 Identities=16% Similarity=0.255 Sum_probs=184.0
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEEC-------CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeee
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-------DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHS 87 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k-------~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~ 87 (771)
...+|++++.||.|+ | .||.|+.. .++..|+||.+.... .......+.+|+..++.+ +||||+++++.
T Consensus 13 ~~~~~~~~~~lg~G~~g--~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 89 (304)
T cd05101 13 SRDKLTLGKPLGEGCFG--QVVMAEALGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGA 89 (304)
T ss_pred cHHHeeecceeeccCCc--eEEEEEEeccCCCCCCcceeEEeeeccccc-chHHHHHHHHHHHHHHhhccCCCchheeEE
Confidence 345799999999998 7 99999753 234579999987532 223456788999999999 89999999999
Q ss_pred EEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCC-------------CCcHHHHHHHHHHHHHHHHHHHcCCCcee
Q 004157 88 TEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEG-------------SQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152 (771)
Q Consensus 88 ~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~-------------~~~~~~i~~gl~QI~~aL~fLH~~~~ivH 152 (771)
+... ..+|+||||+ ++|.++|....... ......+..++.||+.||.|||+ .+++|
T Consensus 90 ~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~-~givH 160 (304)
T cd05101 90 CTQD--------GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS-QKCIH 160 (304)
T ss_pred EecC--------CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH-CCeee
Confidence 8763 3789999999 58999997643211 11223456679999999999996 89999
Q ss_pred cCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHH
Q 004157 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (771)
Q Consensus 153 ~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~ 232 (771)
|||||+||+++.+|.+||+|||+++......... .......+..|+|||++.+ ..++.++|+|||||++|
T Consensus 161 ~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~ 230 (304)
T cd05101 161 RDLAARNVLVTENNVMKIADFGLARDVNNIDYYK----KTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLMW 230 (304)
T ss_pred cccccceEEEcCCCcEEECCCccceecccccccc----cccCCCCCceeeCchhhcc------CCCCchhhHHHHHHHHH
Confidence 9999999999999999999999998764321110 0111122347999998865 35667899999999999
Q ss_pred HHhh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 233 ELFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 233 el~~-g~~p~~~~~l~-------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
++++ |..++...... ....++..+..++.+||..+|..||++.++++.
T Consensus 231 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 231 EIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 9998 56665432111 113467789999999999999999999998864
No 316
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.96 E-value=1.8e-28 Score=261.37 Aligned_cols=232 Identities=14% Similarity=0.192 Sum_probs=177.0
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHH---HhcCCCCCeeEEeeeEEecccCcCCcccE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKR---LRTVRHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~---Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
||+|+ | .||++.++.+|+.|+||++.++.... .......++... +...+||||+.+++.+..+ ..
T Consensus 2 lg~G~~g--~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~ 71 (279)
T cd05633 2 IGRGGFG--EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTP--------DK 71 (279)
T ss_pred cccCCCe--EEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecC--------Ce
Confidence 67776 7 99999999999999999998643321 112233444433 3445799999999999864 37
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
.|+||||+ ++|..++..... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++...
T Consensus 72 ~~lv~e~~~~~~L~~~i~~~~~---l~~~~~~~i~~qi~~al~~lH~-~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~ 147 (279)
T cd05633 72 LCFILDLMNGGDLHYHLSQHGV---FSEKEMRFYATEIILGLEHMHN-RFVVYRDLKPANILLDEHGHVRISDLGLACDF 147 (279)
T ss_pred EEEEEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCcCCCCCCHHHEEECCCCCEEEccCCcceec
Confidence 89999999 579888876543 2344566779999999999996 89999999999999999999999999998755
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh------hh------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------LR------ 247 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~------l~------ 247 (771)
.... .....+...|+|||....+ ..++.++|+|||||++|+|++|..||.... +.
T Consensus 148 ~~~~--------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 214 (279)
T cd05633 148 SKKK--------PHASVGTHGYMAPEVLQKG-----TAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTV 214 (279)
T ss_pred cccC--------ccCcCCCcCccCHHHhcCC-----CCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcC
Confidence 4311 1112345689999987532 345678999999999999999998874321 11
Q ss_pred ---ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 248 ---NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 248 ---~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+|+ ++.++++| +||+.
T Consensus 215 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h-~~~~~ 260 (279)
T cd05633 215 NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH-VFFKG 260 (279)
T ss_pred CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC-ccccC
Confidence 0124667789999999999999999 59999988 67755
No 317
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.96 E-value=2.5e-28 Score=259.40 Aligned_cols=238 Identities=17% Similarity=0.172 Sum_probs=182.9
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
....|++.+.||.|+ | +||+|+++.+|+ .|+||++..... ......+.+|+.+++.+.||||+++++.+...
T Consensus 5 ~~~~~~~~~~lg~G~~g--~vy~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 81 (279)
T cd05109 5 KETELKKVKVLGSGAFG--TVYKGIWIPDGENVKIPVAIKVLRENTS-PKANKEILDEAYVMAGVGSPYVCRLLGICLTS 81 (279)
T ss_pred chhheeeeeecCCCCCc--eEEEEEEecCCCccceEEEEEEecCCCC-HHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC
Confidence 345699999999998 8 999999887776 489999875432 23456788899999999999999999988642
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEE
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWK 169 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~K 169 (771)
..++++|++ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.+|
T Consensus 82 ---------~~~l~~~~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~lH~-~~iiH~dlkp~Nil~~~~~~~k 149 (279)
T cd05109 82 ---------TVQLVTQLMPYGCLLDYVRENKD--RIGSQDLLNWCVQIAKGMSYLEE-VRLVHRDLAARNVLVKSPNHVK 149 (279)
T ss_pred ---------CcEEEEEcCCCCCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHH-CCeeccccccceEEEcCCCcEE
Confidence 568999999 689888876431 12233445558899999999996 8999999999999999999999
Q ss_pred EEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh--
Q 004157 170 LHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-- 246 (771)
Q Consensus 170 L~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l-- 246 (771)
|+|||+++........ ........+..|++||...+ ..++.++|+|||||++||+++ |..|+.....
T Consensus 150 L~dfG~~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~ 219 (279)
T cd05109 150 ITDFGLARLLDIDETE----YHADGGKVPIKWMALESILH------RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE 219 (279)
T ss_pred ECCCCceeecccccce----eecCCCccchhhCCHHHhcc------CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 9999999876432110 00011122347999999865 356788999999999999988 7777653211
Q ss_pred -----hc------cCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 -----RN------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 -----~~------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.. ...++..+..++.+||..+|..||++.++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 220 IPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred HHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 11 1235667889999999999999999999875
No 318
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.96 E-value=3.3e-28 Score=253.64 Aligned_cols=230 Identities=19% Similarity=0.207 Sum_probs=177.1
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIY 103 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iy 103 (771)
+.||.|+ | .||+|..+ ++..|++|++...... .....+.+|++.+++++||||+++++.+... ...|
T Consensus 1 ~~ig~g~~g--~vy~~~~~-~~~~~a~K~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~~~ 68 (250)
T cd05085 1 ELLGKGNFG--EVFKGTLK-DKTPVAVKTCKEDLPQ-ELKIKFLSEARILKQYDHPNIVKLIGVCTQR--------QPIY 68 (250)
T ss_pred CccCCCCCc--eEEEEEec-CCcEEEEEecCCcCCH-HHHHHHHHHHHHHHhCCCCCcCeEEEEEecC--------CccE
Confidence 3578887 8 99999865 6889999998754332 3345688999999999999999999998764 3789
Q ss_pred EEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 104 IVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 104 IVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
+||||+ ++|.+++..... ......+..++.|++.+|.|||+ .+++||||+|+||+++.++.+||+|||++.....
T Consensus 69 lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 145 (250)
T cd05085 69 IVMELVPGGDFLSFLRKKKD--ELKTKQLVKFALDAAAGMAYLES-KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDD 145 (250)
T ss_pred EEEECCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHh-CCeeecccChheEEEcCCCeEEECCCccceeccc
Confidence 999999 578888865432 12344556668999999999996 8999999999999999999999999999875433
Q ss_pred CCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-------------h
Q 004157 182 NNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-------------R 247 (771)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l-------------~ 247 (771)
..... ......+..|+|||+..+ ..++.++|+|||||++|++++ |..||..... .
T Consensus 146 ~~~~~-----~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~ 214 (250)
T cd05085 146 GIYSS-----SGLKQIPIKWTAPEALNY------GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMS 214 (250)
T ss_pred ccccc-----CCCCCCcccccCHHHhcc------CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 11100 000112346999999865 356678999999999999998 7777643211 1
Q ss_pred ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|..+.+++.+|++.+|.+||++.++++.
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 215 CPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 123567889999999999999999999998763
No 319
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.96 E-value=2e-28 Score=262.09 Aligned_cols=240 Identities=15% Similarity=0.178 Sum_probs=183.8
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
...|.+.+.+|.|+ | .||.|.+.. ++..|++|.+.... ....+.+.+|++.+++++||||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (291)
T cd05094 4 RRDIVLKRELGEGAFG--KVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQHEHIVKFYGVCGDG 79 (291)
T ss_pred hHHeEEeeeecccCCC--eEEEeEeeccCCCCcceeeEEEecCCcc--HHHHHHHHHHHHHHhcCCCCCcceEEEEEccC
Confidence 34688999999997 7 899998643 45568888876432 23346788999999999999999999998763
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCC-------------CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCC
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGL-------------EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~-------------~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIk 156 (771)
...|+||||+ ++|.+++..... ........+..++.||+.||.|||+ .+++|||||
T Consensus 80 --------~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlk 150 (291)
T cd05094 80 --------DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS-QHFVHRDLA 150 (291)
T ss_pred --------CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccC
Confidence 3789999999 579999976432 1112344566779999999999996 899999999
Q ss_pred CCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh
Q 004157 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS 236 (771)
Q Consensus 157 p~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~ 236 (771)
|+||+++.++.+||+|||++.......... ..........|+|||++.+ ..++.++|+|||||++|+|++
T Consensus 151 p~Nil~~~~~~~~l~dfg~a~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~el~t 220 (291)
T cd05094 151 TRNCLVGANLLVKIGDFGMSRDVYSTDYYR----VGGHTMLPIRWMPPESIMY------RKFTTESDVWSFGVILWEIFT 220 (291)
T ss_pred cceEEEccCCcEEECCCCcccccCCCceee----cCCCCCcceeecChHHhcc------CCCCchhhHHHHHHHHHHHHh
Confidence 999999999999999999987654321100 0011122347999998876 356778999999999999998
Q ss_pred -CCCCCChhhh-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 237 -GMRLSKTEEL-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 237 -g~~p~~~~~l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
|..|+..... .....+|..+.+++.+||+.+|.+||++.++++.
T Consensus 221 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~ 278 (291)
T cd05094 221 YGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKI 278 (291)
T ss_pred CCCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 8877633211 1123467789999999999999999999998753
No 320
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.96 E-value=1.7e-28 Score=260.34 Aligned_cols=241 Identities=15% Similarity=0.174 Sum_probs=185.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECC----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKD----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~----~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
..|++.+.||.|+ | .||+|+... ++..|+||++...... .....+.+|++.+++++||||++++++++...
T Consensus 4 ~~~~~~~~ig~g~~~--~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~- 79 (284)
T cd05038 4 RHLKFIKQLGEGHFG--KVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPG- 79 (284)
T ss_pred hhchhheeeccCCCe--eEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCC-
Confidence 3578889999998 8 999998653 4789999999865433 35677899999999999999999999887644
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
....|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+
T Consensus 80 -----~~~~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~nil~~~~~~~~l~ 151 (284)
T cd05038 80 -----GRSLRLIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLGS-QRYIHRDLAARNILVESEDLVKIS 151 (284)
T ss_pred -----CCceEEEEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHhEEEcCCCCEEEc
Confidence 34789999999 479999876542 12334466679999999999996 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---- 247 (771)
|||++.......... ........+..|++||...+ ..++.++|+|||||++|||++|..++......
T Consensus 152 dfg~~~~~~~~~~~~---~~~~~~~~~~~~~~Pe~~~~------~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~ 222 (284)
T cd05038 152 DFGLAKVLPEDKDYY---YVKEPGESPIFWYAPECLRT------SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRM 222 (284)
T ss_pred ccccccccccCCcce---eccCCCCCcccccCcHHHcc------CCCCcccchHHHhhhhheeeccCCCcccccchhccc
Confidence 999998765321100 00111223346999998865 25667899999999999999998765421100
Q ss_pred ------------------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ------------------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ------------------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+|..+.+++.+||+.+|..||++.++++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05038 223 IGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILI 279 (284)
T ss_pred cccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 012356678899999999999999999998753
No 321
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.96 E-value=2.8e-28 Score=261.66 Aligned_cols=241 Identities=12% Similarity=0.142 Sum_probs=181.6
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECC----------------CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD----------------DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP 79 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~----------------~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHP 79 (771)
+..+|++.++||.|+ | +||.+.+.. ++..|+||++.... .......+.+|+++++.++||
T Consensus 3 ~~~~~~~~~~lg~G~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~~E~~~l~~l~~~ 79 (296)
T cd05095 3 PRKRLTFKEKLGEGQFG--EVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFLKEIKIMSRLKDP 79 (296)
T ss_pred ChhhceeeeeccCCCCC--eEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCC
Confidence 345699999999998 8 999885432 34578999987542 233456788999999999999
Q ss_pred CeeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCC--------CcHHHHHHHHHHHHHHHHHHHcCCC
Q 004157 80 NILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGS--------QRDEYYAWGLNQIAKAVSFLNNDCK 149 (771)
Q Consensus 80 nIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~--------~~~~~i~~gl~QI~~aL~fLH~~~~ 149 (771)
||+++++++... ...|+||||+ ++|.+++........ .....+..++.||+.||.|||+ .+
T Consensus 80 ~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~-~~ 150 (296)
T cd05095 80 NIIRLLAVCITS--------DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS-LN 150 (296)
T ss_pred CcceEEEEEecC--------CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH-CC
Confidence 999999998764 3789999999 479998876542211 1223456679999999999996 89
Q ss_pred ceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHH
Q 004157 150 LVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGC 229 (771)
Q Consensus 150 ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~ 229 (771)
++||||||+||+++.++.+||+|||++..+...... ........+..|++||...+ ..++.++|+|||||
T Consensus 151 i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~~~~pe~~~~------~~~~~~~DiwSlG~ 220 (296)
T cd05095 151 FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYY----RIQGRAVLPIRWMSWESILL------GKFTTASDVWAFGV 220 (296)
T ss_pred eecccCChheEEEcCCCCEEeccCcccccccCCcce----eccCcCcCccccCCHHHHhc------CCccchhhhhHHHH
Confidence 999999999999999999999999998765432110 00001122357999998765 24667999999999
Q ss_pred HHHHHhh--CCCCCChhh----h----------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 230 LIYELFS--GMRLSKTEE----L----------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 230 li~el~~--g~~p~~~~~----l----------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
++|||++ |..|+.... . .....+|..+.+++.+||+.+|.+||++.++++
T Consensus 221 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 221 TLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999998 555553211 0 011345678899999999999999999999865
No 322
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.96 E-value=2.6e-28 Score=257.72 Aligned_cols=239 Identities=15% Similarity=0.156 Sum_probs=182.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCC---cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGS---PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~---~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
.|++.+.+|.|+ | .||+|+.+.+++ .|+||++.... .+.....+.+|+..++.++||||+++++++..+
T Consensus 5 ~~~~~~~lg~g~~g--~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---- 77 (269)
T cd05065 5 CVKIEEVIGAGEFG--EVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS---- 77 (269)
T ss_pred HeEEEeEecCCCCC--eEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCC----
Confidence 489999999998 8 999999987765 59999987542 334456788999999999999999999998753
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..+|+||||+ ++|.+++..... ......+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 78 ----~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~l~~al~~lH~-~g~~H~dl~p~nili~~~~~~kl~df 150 (269)
T cd05065 78 ----RPVMIITEFMENGALDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLSE-MNYVHRDLAARNILVNSNLVCKVSDF 150 (269)
T ss_pred ----CceEEEEecCCCCcHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHH-CCEeecccChheEEEcCCCcEEECCC
Confidence 3789999999 478888876432 12333455668999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------ 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------ 246 (771)
|++........... .........+..|++||...+ ..++.++|+|||||++||+++ |..||.....
T Consensus 151 g~~~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~------~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~ 223 (269)
T cd05065 151 GLSRFLEDDTSDPT-YTSSLGGKIPIRWTAPEAIAY------RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINA 223 (269)
T ss_pred ccccccccCccccc-cccccCCCcceeecCHhHhcc------CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHH
Confidence 99876543211100 000011111236999999865 356678999999999999886 8777643211
Q ss_pred -------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 -------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 -------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+|+..+|.+||++.+++.
T Consensus 224 i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 224 IEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred HHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 111345677899999999999999999999875
No 323
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=9.2e-30 Score=276.79 Aligned_cols=237 Identities=15% Similarity=0.151 Sum_probs=188.3
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
|.-.+.||.|+ | .||-|++..+++.||||++..+... ......+.+|++.|++|+|||+|.|-++|..+.
T Consensus 28 f~dLrEIGHGSFG--AVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~------ 99 (948)
T KOG0577|consen 28 FSDLREIGHGSFG--AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH------ 99 (948)
T ss_pred HHHHHHhcCCccc--eeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccc------
Confidence 66667899999 9 9999999999999999999865322 234567888999999999999999999998754
Q ss_pred ccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 99 KITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 99 ~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
+.|+||||| |+-.++|.-.... ..+..|+.+.++.+.||.|||+ .+.||||||..||++++.|.+||+|||.+.
T Consensus 100 --TaWLVMEYClGSAsDlleVhkKp--lqEvEIAAi~~gaL~gLaYLHS-~~~IHRDiKAGNILLse~g~VKLaDFGSAs 174 (948)
T KOG0577|consen 100 --TAWLVMEYCLGSASDLLEVHKKP--LQEVEIAAITHGALQGLAYLHS-HNRIHRDIKAGNILLSEPGLVKLADFGSAS 174 (948)
T ss_pred --hHHHHHHHHhccHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHH-hhHHhhhccccceEecCCCeeeeccccchh
Confidence 779999999 7766666544321 1233367779999999999997 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCC-CChhhhhcc-------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL-SKTEELRNT------- 249 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p-~~~~~l~~~------- 249 (771)
..... ..+++++.|||||++..- -...|+-++||||||+.+.||...+|| |+-..+..+
T Consensus 175 i~~PA----------nsFvGTPywMAPEVILAM---DEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNe 241 (948)
T KOG0577|consen 175 IMAPA----------NSFVGTPYWMAPEVILAM---DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE 241 (948)
T ss_pred hcCch----------hcccCCccccchhHheec---cccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcC
Confidence 66542 235667789999998631 114677799999999999999998865 443332222
Q ss_pred ------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCC
Q 004157 250 ------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEY 283 (771)
Q Consensus 250 ------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~f 283 (771)
..-...+..++..||..-|..||+.+++|.|...
T Consensus 242 sPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv 281 (948)
T KOG0577|consen 242 SPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFV 281 (948)
T ss_pred CCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchh
Confidence 1223457888999999999999999999999433
No 324
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.96 E-value=4.3e-28 Score=257.62 Aligned_cols=237 Identities=16% Similarity=0.192 Sum_probs=183.6
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
...|++.+.||.|+ | +||+|+++.+|+ .|++|.+..... ......+.+|+..+++++||||+++++++..
T Consensus 6 ~~~~~~~~~ig~g~~g--~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 80 (279)
T cd05057 6 ETELEKIKVLGSGAFG--TVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDHPHVVRLLGICLS-- 80 (279)
T ss_pred HHHcEEcceecCCCCc--cEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEec--
Confidence 45699999999998 8 999999887775 588888765433 3345678899999999999999999999875
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
...|+||||+ ++|.+++...... .....+..++.||+.||.|||+ ++++||||+|+||+++.++.+||
T Consensus 81 -------~~~~~v~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~LH~-~~i~H~di~p~nil~~~~~~~kL 150 (279)
T cd05057 81 -------SQVQLITQLMPLGCLLDYVRNHKDN--IGSQYLLNWCVQIAKGMSYLEE-KRLVHRDLAARNVLVKTPQHVKI 150 (279)
T ss_pred -------CceEEEEecCCCCcHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHh-CCEEecccCcceEEEcCCCeEEE
Confidence 2689999999 5799988764322 2334455668999999999996 99999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh--
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR-- 247 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~-- 247 (771)
+|||+++....... .........+..|++||.... ..++.++|+|||||++||+++ |..|+......
T Consensus 151 ~dfg~~~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~ 220 (279)
T cd05057 151 TDFGLAKLLDVDEK----EYHAEGGKVPIKWMALESILH------RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEI 220 (279)
T ss_pred CCCcccccccCccc----ceecCCCcccccccCHHHhhc------CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHH
Confidence 99999986653211 111111122347999998764 356678999999999999998 88887542211
Q ss_pred -----c------cCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 248 -----N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 248 -----~------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
. ....+..+..++.+|+..+|..||++.++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 221 PDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred HHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 1 1123456788899999999999999998875
No 325
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.96 E-value=3.1e-28 Score=259.87 Aligned_cols=241 Identities=17% Similarity=0.169 Sum_probs=183.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECC-----CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEe
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD-----DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEV 90 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~-----~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~ 90 (771)
...+|++.+.+|.|+ | .||+|.++. ++..|+||++.... .......+.+|+..+++++||||++++++++.
T Consensus 3 ~~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~ 79 (288)
T cd05050 3 PRNNIEYVRDIGQGAFG--RVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAV 79 (288)
T ss_pred ChHhceecccccccccc--cEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcC
Confidence 345799999999998 8 999998753 67899999987543 23345678899999999999999999999876
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCC-------------------CCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------------GSQRDEYYAWGLNQIAKAVSFLNNDCK 149 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ 149 (771)
+ ...|+|+||+ ++|.+++...... .......+..++.||+.||.|||+ .+
T Consensus 80 ~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~-~~ 150 (288)
T cd05050 80 G--------KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE-RK 150 (288)
T ss_pred C--------CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh-CC
Confidence 3 3789999999 4799998754310 011233456679999999999996 89
Q ss_pred ceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHH
Q 004157 150 LVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGC 229 (771)
Q Consensus 150 ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~ 229 (771)
++||||+|+||+++.+|.+||+|||++........... ......+..|+|||+..+ ..++.++|+|||||
T Consensus 151 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~ 220 (288)
T cd05050 151 FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA----SENDAIPIRWMPPESIFY------NRYTTESDVWAYGV 220 (288)
T ss_pred eecccccHhheEecCCCceEECccccceecccCccccc----cCCCccChhhcCHHHHhc------CCCCchhHHHHHHH
Confidence 99999999999999999999999999876543211000 011122347999998765 35678899999999
Q ss_pred HHHHHhh-CCCCCChh---hh-h---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 230 LIYELFS-GMRLSKTE---EL-R---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 230 li~el~~-g~~p~~~~---~l-~---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
++|+|++ |..++... .. . ....+|..+.+++.+||+.+|.+||++.++++
T Consensus 221 il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 221 VLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 9999997 65555321 11 1 12346778999999999999999999999875
No 326
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=2.4e-28 Score=267.18 Aligned_cols=242 Identities=17% Similarity=0.236 Sum_probs=183.0
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCC-------CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeee
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDD-------GSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHS 87 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~-------g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~ 87 (771)
...+|++++.||.|+ | .||.|.+... +..|+||.+... ..+.....+.+|++.++++ +||||+++++.
T Consensus 10 ~~~~~~i~~~ig~G~~g--~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (334)
T cd05100 10 SRTRLTLGKPLGEGCFG--QVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINLLGA 86 (334)
T ss_pred CHhHeeecceeccccCC--cEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEE
Confidence 345799999999998 7 8999986432 236899988743 2334466788999999999 79999999999
Q ss_pred EEecccCcCCcccEEEEEecCC--cchHHHHHHhCCC-------------CCCcHHHHHHHHHHHHHHHHHHHcCCCcee
Q 004157 88 TEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVH 152 (771)
Q Consensus 88 ~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH 152 (771)
+..+ ..+|+++||+ ++|.++|...... .......+..++.||+.||.|||+ .+++|
T Consensus 87 ~~~~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~-~givH 157 (334)
T cd05100 87 CTQD--------GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS-QKCIH 157 (334)
T ss_pred EccC--------CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH-CCeec
Confidence 8763 3789999999 5799998764311 112223455679999999999996 89999
Q ss_pred cCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHH
Q 004157 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIY 232 (771)
Q Consensus 153 ~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~ 232 (771)
|||||+||+++.++.+||+|||+++......... .......+..|+|||++.+ ..++.++|+|||||++|
T Consensus 158 ~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~il~ 227 (334)
T cd05100 158 RDLAARNVLVTEDNVMKIADFGLARDVHNIDYYK----KTTNGRLPVKWMAPEALFD------RVYTHQSDVWSFGVLLW 227 (334)
T ss_pred cccccceEEEcCCCcEEECCcccceecccccccc----cccCCCcCceEcCHHHhcc------CCcCchhhhHHHHHHHH
Confidence 9999999999999999999999997664321100 0111112246999999865 35667899999999999
Q ss_pred HHhh-CCCCCChhhhh-------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 233 ELFS-GMRLSKTEELR-------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 233 el~~-g~~p~~~~~l~-------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
||++ |..++...... ....++..+..++.+|++.+|.+||++.+++++
T Consensus 228 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 228 EIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 9998 66666432110 112346678899999999999999999999875
No 327
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=8.5e-30 Score=278.15 Aligned_cols=243 Identities=16% Similarity=0.231 Sum_probs=194.6
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|+|...+|.|. | +||+|+++.++-..|-|+++.+. +..++.+.-|+.+|..+.||+|+++++.|..++
T Consensus 34 WeIiGELGDGAFG--KVyKA~nket~~lAAaKvIetks--eEELEDylVEIeILa~CdHP~ivkLl~ayy~en------- 102 (1187)
T KOG0579|consen 34 WEIIGELGDGAFG--KVYKAVNKETKLLAAAKVIETKS--EEELEDYLVEIEILAECDHPVIVKLLSAYYFEN------- 102 (1187)
T ss_pred HHHHhhhcCccch--hhhhhhcccchhhhhhhhhcccc--hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC-------
Confidence 67777888888 9 99999999999999999998643 345777888999999999999999999998764
Q ss_pred cEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 100 ITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 100 ~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
.++|..|||+ ....++-+.+.. .....|+..++|++.||.|||+ .+|||||||..||+++-+|+++|+|||.+.
T Consensus 103 -kLwiliEFC~GGAVDaimlEL~r~--LtE~QIqvvc~q~ldALn~LHs-~~iIHRDLKAGNiL~TldGdirLADFGVSA 178 (1187)
T KOG0579|consen 103 -KLWILIEFCGGGAVDAIMLELGRV--LTEDQIQVVCYQVLDALNWLHS-QNIIHRDLKAGNILLTLDGDIRLADFGVSA 178 (1187)
T ss_pred -ceEEEEeecCCchHhHHHHHhccc--cchHHHHHHHHHHHHHHHHHhh-cchhhhhccccceEEEecCcEeeecccccc
Confidence 8999999993 466666554422 2344578889999999999996 899999999999999999999999999986
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh-hhh----------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT-EEL---------- 246 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~-~~l---------- 246 (771)
..... .-.+..+++++.|||||+..+... -...|.+++||||||+.+.||.-+.||... ..+
T Consensus 179 Kn~~t------~qkRDsFIGTPYWMAPEVvmCET~-KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSe 251 (1187)
T KOG0579|consen 179 KNKST------RQKRDSFIGTPYWMAPEVVMCETF-KDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE 251 (1187)
T ss_pred cchhH------HhhhccccCCcccccchheeeccc-cCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcC
Confidence 54431 112334667778999999876432 235788999999999999999999887532 112
Q ss_pred ----hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 247 ----RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 ----~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
.+......++.+++++||..||..||+++++|+| +||.|
T Consensus 252 PPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H-pfv~~ 294 (1187)
T KOG0579|consen 252 PPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH-PFVQN 294 (1187)
T ss_pred CCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC-ccccc
Confidence 2223445568899999999999999999999999 66653
No 328
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.96 E-value=3.9e-28 Score=256.97 Aligned_cols=229 Identities=17% Similarity=0.165 Sum_probs=178.0
Q ss_pred CceecCCC--CCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPY--PSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~i--g~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~ 95 (771)
.|++.+.+ |.|. | +||.++++.++..+++|++........ |+.....+ +||||+++++.+...
T Consensus 15 ~~~~~~~~~lg~g~~g--~v~~~~~~~~~~~~~~k~~~~~~~~~~-------e~~~~~~~~~h~~iv~~~~~~~~~---- 81 (267)
T PHA03390 15 NCEIVKKLKLIDGKFG--KVSVLKHKPTQKLFVQKIIKAKNFNAI-------EPMVHQLMKDNPNFIKLYYSVTTL---- 81 (267)
T ss_pred hhccccceeecCCCce--EEEEEEEcCCCcEEEEEEEehhhcchh-------hHHHHHHhhcCCCEEEEEEEEecC----
Confidence 57777766 8887 8 999999999999999999976432211 22222222 699999999999864
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-cEEEEc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHA 172 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G-~~KL~d 172 (771)
..+|+||||+ ++|.++++.... .....+..++.||++||.|||+ .+++||||+|+||+++.++ .++|+|
T Consensus 82 ----~~~~iv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~~l~d 153 (267)
T PHA03390 82 ----KGHVLIMDYIKDGDLFDLLKKEGK---LSEAEVKKIIRQLVEALNDLHK-HNIIHNDIKLENVLYDRAKDRIYLCD 153 (267)
T ss_pred ----CeeEEEEEcCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHh-CCeeeCCCCHHHEEEeCCCCeEEEec
Confidence 3899999999 579999877642 2344456669999999999996 8999999999999999998 999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-------
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------- 245 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~------- 245 (771)
||++....... .......|+|||++.+ ..++.++|+|||||++|+|++|..||....
T Consensus 154 fg~~~~~~~~~----------~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~ 217 (267)
T PHA03390 154 YGLCKIIGTPS----------CYDGTLDYFSPEKIKG------HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLE 217 (267)
T ss_pred CccceecCCCc----------cCCCCCcccChhhhcC------CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHH
Confidence 99987654321 1123458999999875 356678999999999999999998875321
Q ss_pred -h--------hccCCCCcchHHHHHHHhccCCCCCCC-hHHHhhCCCCCcc
Q 004157 246 -L--------RNTASIPKSLLPDYQRLLSSMPSRRLN-SSKLIENSEYFQN 286 (771)
Q Consensus 246 -l--------~~~~~IP~~l~~~i~~lL~~~P~~Rps-~~~lL~~~~fF~n 286 (771)
+ .....++..+.+++.+||+.+|.+|++ ++++++| +||.|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h-~~~~~ 267 (267)
T PHA03390 218 SLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH-PFLKI 267 (267)
T ss_pred HHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcC-CcccC
Confidence 1 111246778899999999999999996 6999998 56543
No 329
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-29 Score=257.30 Aligned_cols=245 Identities=19% Similarity=0.243 Sum_probs=186.5
Q ss_pred ceec-CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCC
Q 004157 21 YNIG-DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 21 Y~i~-e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~ 97 (771)
|++. +.+|+|. + .|.-++...+|..||||++++... ....++.+|++++.+.+ |+||++++++||+++
T Consensus 79 YkLt~e~LGeGAya--sVqtcv~i~t~~EYAVKiidKq~g--HsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~----- 149 (463)
T KOG0607|consen 79 YKLTSELLGEGAYA--SVQTCVSIQTGKEYAVKIIDKQPG--HSRSRVFREVETFYQCQGHKNILQLIEFFEDDT----- 149 (463)
T ss_pred HHhHHHHhcCccce--eeeeeeeeccchhhhhhhhhcCCc--hHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc-----
Confidence 6664 5788887 7 899999999999999999997522 24566778999999997 999999999999854
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc---EEEEc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD---WKLHA 172 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~---~KL~d 172 (771)
.+|+|||.+ +||..+|.++....+.. -...+..|+.||.|||. .||.||||||+||+...-.. +||||
T Consensus 150 ---~FYLVfEKm~GGplLshI~~~~~F~E~E---As~vvkdia~aLdFlH~-kgIAHRDlKPENiLC~~pn~vsPvKiCD 222 (463)
T KOG0607|consen 150 ---RFYLVFEKMRGGPLLSHIQKRKHFNERE---ASRVVKDIASALDFLHT-KGIAHRDLKPENILCESPNKVSPVKICD 222 (463)
T ss_pred ---eEEEEEecccCchHHHHHHHhhhccHHH---HHHHHHHHHHHHHHHhh-cCcccccCCccceeecCCCCcCceeeec
Confidence 899999999 68888887765433222 23348999999999995 89999999999999975443 89999
Q ss_pred cCcccccCCCCCCCCCCccccc---cccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYA---WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE---- 245 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~---~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~---- 245 (771)
|++.+.......-. +..... .++...|||||+..- +..-...|..++|.||||+++|-|+.|.+||...-
T Consensus 223 fDLgSg~k~~~~~s--pastP~L~tPvGSAEfMAPEVVd~-fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC 299 (463)
T KOG0607|consen 223 FDLGSGIKLNNDCS--PASTPELLTPVGSAEFMAPEVVDV-FVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC 299 (463)
T ss_pred cccccccccCCCCC--CCCCccccCcccchhhcchhHHhh-hccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC
Confidence 99988765433221 222211 122338999999753 11122467889999999999999999999984311
Q ss_pred --------------h-------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 246 --------------L-------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 246 --------------l-------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
+ +....|+....+++..||..++..|.++.++++| +|++
T Consensus 300 GWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh-Pw~~ 365 (463)
T KOG0607|consen 300 GWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH-PWVQ 365 (463)
T ss_pred CccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC-cccc
Confidence 0 0112455567788899999999999999999998 4444
No 330
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.96 E-value=5.7e-28 Score=253.99 Aligned_cols=231 Identities=16% Similarity=0.158 Sum_probs=175.3
Q ss_pred CCCCCC-CceEEEEeEEC--CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSK--DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k--~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
.||.|+ | .||.|+.+ .++..|+||++.... .....+.+.+|+.++++++||||++++++++. ...
T Consensus 2 ~ig~G~~g--~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~---------~~~ 69 (257)
T cd05115 2 ELGSGNFG--CVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA---------EAL 69 (257)
T ss_pred ccCCCCcc--cEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC---------CCe
Confidence 367777 7 89999875 345679999987543 23345678899999999999999999998763 268
Q ss_pred EEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 103 YIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 70 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~ 146 (257)
T cd05115 70 MLVMEMASGGPLNKFLSGKKD--EITVSNVVELMHQVSMGMKYLEG-KNFVHRDLAARNVLLVNQHYAKISDFGLSKALG 146 (257)
T ss_pred EEEEEeCCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHh-cCeeecccchheEEEcCCCcEEeccCCcccccc
Confidence 9999999 579988875332 12344566779999999999996 899999999999999999999999999987654
Q ss_pred CCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh-------h-----
Q 004157 181 GNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL-------R----- 247 (771)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l-------~----- 247 (771)
...... ........+..|+|||.+.. ..++.++|+|||||++|++++ |..||..... .
T Consensus 147 ~~~~~~---~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~ 217 (257)
T cd05115 147 ADDSYY---KARSAGKWPLKWYAPECINF------RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRL 217 (257)
T ss_pred CCccce---eccCCCCCCcccCCHHHHcc------CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC
Confidence 321100 00111122347999998765 346678999999999999996 8888753211 0
Q ss_pred -ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 -NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 -~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+..+.+++.+|+..+|++||+..++.+.
T Consensus 218 ~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~ 251 (257)
T cd05115 218 DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEER 251 (257)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 112356789999999999999999999998764
No 331
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=3.5e-28 Score=259.81 Aligned_cols=243 Identities=15% Similarity=0.264 Sum_probs=186.6
Q ss_pred CceecCCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCCc--hhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNAQ--DGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k---~~g~~VaIK~~~~~~~~--~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~ 92 (771)
+|++.+.+|.|+ | .||.+++. .+|..|+||++...... ....+.+.+|+++|++++ ||||+++++.++.+
T Consensus 1 ~y~~~~~lg~G~~g--~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~- 77 (290)
T cd05613 1 NFELLKVLGTGAYG--KVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTD- 77 (290)
T ss_pred CceeeeeeccCCcc--eEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecC-
Confidence 489999999998 8 88888874 47899999999753221 134566788999999995 99999999999863
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
..+|+||||+ ++|.+++...... ....+..++.||+.||.|||+ .+++||||+|+||+++.+|.+||
T Consensus 78 -------~~~~lv~e~~~~~~L~~~l~~~~~l---~~~~~~~~~~qi~~al~~lH~-~~i~H~dl~p~nil~~~~~~~kl 146 (290)
T cd05613 78 -------TKLHLILDYINGGELFTHLSQRERF---KEQEVQIYSGEIVLALEHLHK-LGIIYRDIKLENILLDSNGHVVL 146 (290)
T ss_pred -------CeEEEEEecCCCCcHHHHHHHcCCC---CHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeEECCCCCEEE
Confidence 3889999999 5799888765432 244566678899999999996 89999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----- 245 (771)
+|||++......... ......+...|++||.+.+.. ..+..++|+|||||++|+|++|..|+....
T Consensus 147 ~dfg~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~----~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~ 217 (290)
T cd05613 147 TDFGLSKEFHEDEVE-----RAYSFCGTIEYMAPDIVRGGD----GGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQ 217 (290)
T ss_pred eeCccceeccccccc-----ccccccCCcccCChhhccCCC----CCCCccccHHHHHHHHHHHhcCCCCCCcCCccccH
Confidence 999998765432110 111233445899999986421 234578999999999999999998874211
Q ss_pred --h-h----cc----CCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 246 --L-R----NT----ASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 246 --l-~----~~----~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
+ . .. ..++..+.+++.+||..+|.+|+ ++.+++.| +||+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~-~~~~~ 273 (290)
T cd05613 218 AEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH-PFFQK 273 (290)
T ss_pred HHHHHHhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC-ccccc
Confidence 0 0 01 23455688999999999999997 78898888 56644
No 332
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.96 E-value=4.3e-28 Score=261.49 Aligned_cols=241 Identities=16% Similarity=0.192 Sum_probs=184.9
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e 89 (771)
...+|.+++.||.|+ | .||.|+. ..++..|+||++..... ....+.+.+|+++++++ +||||+++++.+.
T Consensus 33 ~~~~~~~~~~ig~G~~g--~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 109 (302)
T cd05055 33 PRNNLSFGKTLGAGAFG--KVVEATAYGLSKSDAVMKVAVKMLKPTAH-SSEREALMSELKIMSHLGNHENIVNLLGACT 109 (302)
T ss_pred cHHHeEEcceeeccCCe--eEEEEEEecCCCCCceeEEEEEecCccCC-hHHHHHHHHHHHHHHhccCCCCcceEEEEEe
Confidence 344788999999998 8 8999875 34466899999875432 23456789999999999 7999999999987
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~ 167 (771)
.. ..+|+||||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||||+||+++.++.
T Consensus 110 ~~--------~~~~lv~e~~~~~~L~~~i~~~~~~-~l~~~~~~~i~~~i~~~l~~lH~-~~ivH~dlkp~Nil~~~~~~ 179 (302)
T cd05055 110 IG--------GPILVITEYCCYGDLLNFLRRKRES-FLTLEDLLSFSYQVAKGMAFLAS-KNCIHRDLAARNVLLTHGKI 179 (302)
T ss_pred cC--------CceEEEEEcCCCCcHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHH-CCeehhhhccceEEEcCCCe
Confidence 63 3789999999 5799998764321 12344466678999999999996 89999999999999999999
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL 246 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l 246 (771)
+||+|||++........ .........+..|+|||.+.+ ..++.++|+|||||++|++++ |..|+.....
T Consensus 180 ~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~------~~~~~~~DiwslGvil~el~t~g~~p~~~~~~ 249 (302)
T cd05055 180 VKICDFGLARDIMNDSN----YVVKGNARLPVKWMAPESIFN------CVYTFESDVWSYGILLWEIFSLGSNPYPGMPV 249 (302)
T ss_pred EEECCCcccccccCCCc----eeecCCCCcccccCCHhhhcc------CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc
Confidence 99999999876543211 000111123347999998865 356678999999999999997 8777643211
Q ss_pred --------h------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 --------R------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 --------~------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. ....++..+.+++.+||+.+|.+||++.++++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~ 297 (302)
T cd05055 250 DSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQL 297 (302)
T ss_pred hHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 0 112456789999999999999999999998763
No 333
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.96 E-value=6.5e-28 Score=254.82 Aligned_cols=245 Identities=11% Similarity=0.121 Sum_probs=183.6
Q ss_pred ceecCCCCCCC-CceEEEEeEECC---CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKD---DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~---~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
|++.+.||.|+ | +||+|..+. ++..|+||++..+.......+.+.+|++.+++++||||+++++++......+
T Consensus 1 ~~~~~~ig~g~~g--~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~- 77 (273)
T cd05074 1 FTLGRMLGKGEFG--SVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKG- 77 (273)
T ss_pred CcchhcccCCCCC--CEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCC-
Confidence 77889999998 8 899998654 4688999999866555555677889999999999999999999886532110
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCC---CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLE---GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~---~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
.....++++||+ ++|..++...... .......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+
T Consensus 78 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~-~~i~H~dikp~nili~~~~~~kl~ 155 (273)
T cd05074 78 -RLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS-KNFIHRDLAARNCMLNENMTVCVA 155 (273)
T ss_pred -cccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCEeecccchhhEEEcCCCCEEEC
Confidence 012357889998 5788777543211 112334456679999999999996 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL---- 246 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l---- 246 (771)
|||+++......... .......+..|++||...+ ..++.++|+|||||++|+|++ |.+++.....
T Consensus 156 dfg~~~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~------~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~ 225 (273)
T cd05074 156 DFGLSKKIYSGDYYR----QGCASKLPVKWLALESLAD------NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIY 225 (273)
T ss_pred cccccccccCCccee----cCCCccCchhhcCHhHHhc------CccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHH
Confidence 999988664321100 0111123347999998765 355678999999999999998 6677643221
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ---------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....++..+.+++.+|++.+|..||++.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 226 NYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred HHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1113456788999999999999999999998764
No 334
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.96 E-value=2.6e-30 Score=261.87 Aligned_cols=246 Identities=15% Similarity=0.197 Sum_probs=199.8
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.-|.+.+++|+|+ | .||++.++++|+.|+||.+... ..++.+.+|+.++++++.|+|++||+.+...
T Consensus 33 EVFDi~~KLGEGSYG--SV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~------ 100 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYG--SVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKH------ 100 (502)
T ss_pred HHHHHHHHhcCCcch--HHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhccC------
Confidence 3488899999998 8 8999999999999999998653 4567788899999999999999999998753
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
+.+||||||| ++..+.++.++.. ..+..|..++..-++||+|||. .+-+|||||..||+++.+|..||+|||.
T Consensus 101 --sDLWIVMEYCGAGSiSDI~R~R~K~--L~E~EIs~iL~~TLKGL~YLH~-~~KIHRDIKAGNILLNT~G~AKLADFGV 175 (502)
T KOG0574|consen 101 --SDLWIVMEYCGAGSISDIMRARRKP--LSEQEISAVLRDTLKGLQYLHD-LKKIHRDIKAGNILLNTDGIAKLADFGV 175 (502)
T ss_pred --CceEeehhhcCCCcHHHHHHHhcCC--ccHHHHHHHHHHHHhHHHHHHH-HHHHHhhcccccEEEcccchhhhhhccc
Confidence 3799999999 5899988776532 2344577779999999999995 8899999999999999999999999999
Q ss_pred ccccCCCCCCCCCCcccc-ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh-hhhhccCC--
Q 004157 176 LSEFDGNNEAANGPMLQY-AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT-EELRNTAS-- 251 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~-~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~-~~l~~~~~-- 251 (771)
+..+.+. +... ..++++.|||||++.. -+|...+||||||+...||..|++|+.. ..++.+.-
T Consensus 176 AGQLTDT-------MAKRNTVIGTPFWMAPEVI~E------IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIP 242 (502)
T KOG0574|consen 176 AGQLTDT-------MAKRNTVIGTPFWMAPEVIEE------IGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIP 242 (502)
T ss_pred cchhhhh-------HHhhCccccCcccccHHHHHH------hccchhhhHhhhcchhhhhhcCCCCcccccccceeEecc
Confidence 9888763 2222 2344568999999875 3677899999999999999999998753 23333221
Q ss_pred ------------CCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc-hhhhhhhhh
Q 004157 252 ------------IPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN-KLVDTIHFM 295 (771)
Q Consensus 252 ------------IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n-~lv~~~~~L 295 (771)
-+.++.+++++||-.+|++|-++.++++| .|.+| +-+.+++.|
T Consensus 243 T~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H-~FiknA~g~~I~~~~ 298 (502)
T KOG0574|consen 243 TKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH-TFIKNAPGCDIMQLM 298 (502)
T ss_pred CCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh-hhhcCCCcccHHHHH
Confidence 22357788999999999999999999999 56644 566665554
No 335
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.96 E-value=3.8e-28 Score=260.76 Aligned_cols=236 Identities=19% Similarity=0.228 Sum_probs=186.0
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|+...+||.|+ | .||+|+.+.+|+.|+||++.... ......+.+|+..++.++||||+++++.+...
T Consensus 22 ~~~~~~lg~g~~g--~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-------- 89 (292)
T cd06657 22 LDNFIKIGEGSTG--IVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-------- 89 (292)
T ss_pred hhhHHHcCCCCCe--EEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEeC--------
Confidence 44445788888 8 99999999999999999986432 23456788999999999999999999999863
Q ss_pred cEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 100 ~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
.+.|+||||+ ++|.+++..... ....+..++.|++.||.|||+ .+++||||+|+||+++.+|.++|+|||++.
T Consensus 90 ~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~ql~~~l~~lH~-~givH~dl~p~Nilv~~~~~~~l~dfg~~~ 164 (292)
T cd06657 90 DELWVVMEFLEGGALTDIVTHTRM----NEEQIAAVCLAVLKALSVLHA-QGVIHRDIKSDSILLTHDGRVKLSDFGFCA 164 (292)
T ss_pred CEEEEEEecCCCCcHHHHHhcCCC----CHHHHHHHHHHHHHHHHHHHH-CCeecCCCCHHHEEECCCCCEEEcccccce
Confidence 4899999999 468877755332 334466779999999999996 899999999999999999999999999987
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh------------
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------------ 245 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~------------ 245 (771)
........ .........|++||...+ ..++.++|+||||+++|++++|..|+....
T Consensus 165 ~~~~~~~~------~~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~ 232 (292)
T cd06657 165 QVSKEVPR------RKSLVGTPYWMAPELISR------LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL 232 (292)
T ss_pred eccccccc------ccccccCccccCHHHhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC
Confidence 65432110 011123347999998765 245678999999999999999998874321
Q ss_pred ---hhccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 246 ---LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 246 ---l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
......++..+.+++.+||..+|.+||++.+++.| +||..
T Consensus 233 ~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~-~~~~~ 275 (292)
T cd06657 233 PPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH-PFLAK 275 (292)
T ss_pred CcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcC-hHHhc
Confidence 11224567889999999999999999999999998 55543
No 336
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.96 E-value=6.1e-28 Score=253.45 Aligned_cols=235 Identities=15% Similarity=0.154 Sum_probs=173.9
Q ss_pred CCCCCCC-CceEEEEeEECC---CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCccc
Q 004157 25 DPYPSAW-GSWSHFQGTSKD---DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~---~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
+.||.|+ | +||+|.... ++..|+||.+.... .......+.+|+..++.++||||+++++.+...+ .
T Consensus 1 ~~lg~g~~g--~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-------~ 70 (262)
T cd05058 1 RVIGKGHFG--CVYHGTLIDSDGQKIHCAVKSLNRIT-DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE-------G 70 (262)
T ss_pred CcccccCCc--eEEEEEEecCCCceEEEEEEecCccC-CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCC-------C
Confidence 3578887 8 899998654 34579999986422 2234567888999999999999999999765432 2
Q ss_pred EEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 101 TIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 101 ~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
..|+||||+ ++|.+++...... .....+...+.||+.||.|||+ .+++||||||+||+++.++.+||+|||+++.
T Consensus 71 ~~~lv~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH~-~~i~H~dlk~~nili~~~~~~kl~dfg~~~~ 147 (262)
T cd05058 71 SPLVVLPYMKHGDLRNFIRSETHN--PTVKDLIGFGLQVAKGMEYLAS-KKFVHRDLAARNCMLDESFTVKVADFGLARD 147 (262)
T ss_pred CcEEEEecCCCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHh-CCccccccCcceEEEcCCCcEEECCcccccc
Confidence 578999999 5799998764322 1223344557899999999996 8999999999999999999999999999876
Q ss_pred cCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCC-CCCChhhh-----------
Q 004157 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSKTEEL----------- 246 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~-~p~~~~~l----------- 246 (771)
........ .........+..|+|||...+ ..++.++|+|||||++|||++|+ +++.....
T Consensus 148 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~ 219 (262)
T cd05058 148 IYDKEYYS--VHNHTGAKLPVKWMALESLQT------QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGR 219 (262)
T ss_pred ccCCccee--ecccccCcCCccccChhHhcc------CccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC
Confidence 54321100 000111122347999998765 35667899999999999999954 55532211
Q ss_pred --hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 --RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 --~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....+|..+.+++.+||..+|++||++.++++.
T Consensus 220 ~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 220 RLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 1123467889999999999999999999998864
No 337
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.96 E-value=1e-27 Score=252.92 Aligned_cols=238 Identities=16% Similarity=0.245 Sum_probs=184.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECC-CCCcEEEEEEeCCC--------CchhHHHHHHHHHHHHhc-CCCCCeeEEeeeE
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKD-DGSPVSIFSISGTN--------AQDGHLAAARNGVKRLRT-VRHPNILAFLHST 88 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~-~g~~VaIK~~~~~~--------~~~~~~~~~~~ei~~Lk~-LrHPnIlkv~d~~ 88 (771)
.|++.+.||.|+ | .||.|.++. .++.|+||.+.... ..+.....+.+|++.+++ ++||||+++++.+
T Consensus 1 ~y~~~~~ig~G~~~--~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 78 (269)
T cd08528 1 EYAVLEHLGSGAFG--CVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTF 78 (269)
T ss_pred CchhhhhhcCCCCc--eEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeE
Confidence 488999999998 8 999999987 67899999886432 122344556778888875 7999999999998
Q ss_pred EecccCcCCcccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC
Q 004157 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT 165 (771)
Q Consensus 89 e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~ 165 (771)
+.+ ...|+||||+ ++|.+++..... ........++..+.|++.+|.|||+..+++||||+|+||+++.+
T Consensus 79 ~~~--------~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~ 150 (269)
T cd08528 79 LEN--------DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGED 150 (269)
T ss_pred ccC--------CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCC
Confidence 763 4899999999 478887754321 11223344566689999999999954789999999999999999
Q ss_pred CcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh
Q 004157 166 LDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE 245 (771)
Q Consensus 166 G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~ 245 (771)
+.+||+|||++....... ......++..|++||...+ ..++.++|+||||+++|+|++|.+|+....
T Consensus 151 ~~~~l~dfg~~~~~~~~~-------~~~~~~~~~~~~~Pe~~~~------~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~ 217 (269)
T cd08528 151 DKVTITDFGLAKQKQPES-------KLTSVVGTILYSCPEIVKN------EPYGEKADVWAFGCILYQMCTLQPPFYSTN 217 (269)
T ss_pred CcEEEecccceeeccccc-------ccccccCcccCcChhhhcC------CCCchHHHHHHHHHHHHHHHhCCCcccccC
Confidence 999999999997654421 0112234558999999876 346678999999999999999998875432
Q ss_pred hhc--------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 LRN--------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 l~~--------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
... ...++..+.+++.+|+..+|.+||++.++..+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 218 MLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred HHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 210 12456789999999999999999999998654
No 338
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.96 E-value=5.1e-28 Score=253.22 Aligned_cols=226 Identities=19% Similarity=0.212 Sum_probs=178.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.+|.|+ | .||.|. .+++.|+||.+.... ....+.+|+..++.++||||+++++.+..+
T Consensus 7 ~~~~~~~lg~g~~g--~v~~~~--~~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------- 71 (254)
T cd05083 7 KLTLGEIIGEGEFG--AVLQGE--YTGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILHN------- 71 (254)
T ss_pred HceeeeeeccCCCC--ceEecc--cCCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-------
Confidence 599999999998 8 899986 368899999986432 234678899999999999999999988642
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..|+||||+ ++|.+++....... .....+..++.|++.||.|||+ .+++||||+|+||+++.+|.+||+|||++
T Consensus 72 --~~~~v~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~~qi~~al~~lH~-~~~~H~dl~p~nili~~~~~~kl~Dfg~~ 147 (254)
T cd05083 72 --GLYIVMELMSKGNLVNFLRTRGRAL-VSVIQLLQFSLDVAEGMEYLES-KKLVHRDLAARNILVSEDGVAKVSDFGLA 147 (254)
T ss_pred --CcEEEEECCCCCCHHHHHHhcCcCC-CCHHHHHHHHHHHHHHHHHHHh-CCeeccccCcceEEEcCCCcEEECCCccc
Confidence 479999999 58999987654221 2233455568999999999996 99999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh--------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR-------- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~-------- 247 (771)
....... .....+..|+|||.+.+ ..++.+.|+|||||++|+|++ |.+||......
T Consensus 148 ~~~~~~~---------~~~~~~~~y~~pe~~~~------~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 212 (254)
T cd05083 148 RVGSMGV---------DNSKLPVKWTAPEALKH------KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEK 212 (254)
T ss_pred eeccccC---------CCCCCCceecCHHHhcc------CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhC
Confidence 7543211 01122457999998865 356678999999999999997 77777433211
Q ss_pred -----ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 248 -----NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 248 -----~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
....+|..+.+++.+|++.+|..||++.++++
T Consensus 213 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 213 GYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred CCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 12346778999999999999999999999875
No 339
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.96 E-value=9.3e-28 Score=255.54 Aligned_cols=237 Identities=14% Similarity=0.137 Sum_probs=178.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCc----EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSP----VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~----VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
..|++.+.||.|+ | +||+|++..+|+. |++|.+.... .......+.+|+..+++++||||+++++++..
T Consensus 7 ~~~~~~~~lg~G~~~--~vy~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~--- 80 (279)
T cd05111 7 TELRKLKLLGSGVFG--TVHKGIWIPEGDSIKIPVAIKTIQDRS-GRQTFQEITDHMLAMGSLDHAYIVRLLGICPG--- 80 (279)
T ss_pred hhceeccccCccCCc--ceEEEEEcCCCCceeeEEEEeeccccc-chHHHHHHHHHHHHHhcCCCCCcceEEEEECC---
Confidence 4689999999998 8 8999999888774 6777765322 22334567788999999999999999998753
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
...++++||+ ++|.+++...... .....+..++.||+.||.|||+ .+++||||||+||+++.++.+||+
T Consensus 81 ------~~~~~i~e~~~~gsL~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~lH~-~~iiH~dlkp~nili~~~~~~kl~ 151 (279)
T cd05111 81 ------ASLQLVTQLSPLGSLLDHVRQHRDS--LDPQRLLNWCVQIAKGMYYLEE-HRMVHRNLAARNILLKSDSIVQIA 151 (279)
T ss_pred ------CccEEEEEeCCCCcHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHH-CCEeccccCcceEEEcCCCcEEEc
Confidence 2578899998 5899998764321 2233455568999999999996 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh---
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR--- 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~--- 247 (771)
|||+++....... .........+..|++||+..+ ..++.++|+|||||++||+++ |..|+......
T Consensus 152 Dfg~~~~~~~~~~----~~~~~~~~~~~~y~~pE~~~~------~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~ 221 (279)
T cd05111 152 DFGVADLLYPDDK----KYFYSEHKTPIKWMALESILF------GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVP 221 (279)
T ss_pred CCccceeccCCCc----ccccCCCCCcccccCHHHhcc------CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 9999976543211 111111122347999999875 356789999999999999997 88777432211
Q ss_pred ---c-------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 ---N-------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ---~-------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. ....+..+..++.+|+..+|..||++.++++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~ 264 (279)
T cd05111 222 DLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANE 264 (279)
T ss_pred HHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0 11234567888999999999999999998653
No 340
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.96 E-value=7.9e-28 Score=251.70 Aligned_cols=233 Identities=15% Similarity=0.156 Sum_probs=181.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.|++.+.+|.|+ | .||+|.+. ++..++||++...... ...+.+|++.+++++||||++++++++..
T Consensus 5 ~~~~~~~ig~g~~g--~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (256)
T cd05112 5 ELTLVQEIGSGQFG--LVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTER------- 71 (256)
T ss_pred HeEEEeeecCcccc--eEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEccC-------
Confidence 688999999998 8 89999886 4778999998754332 23577899999999999999999998763
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
..+|+|+||+ +.|.+++..... ....+.+...+.|++.+|.|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 72 -~~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~-~~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 147 (256)
T cd05112 72 -SPICLVFEFMEHGCLSDYLRAQRG--KFSQETLLGMCLDVCEGMAYLES-SNVIHRDLAARNCLVGENQVVKVSDFGMT 147 (256)
T ss_pred -CceEEEEEcCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHH-CCccccccccceEEEcCCCeEEECCCcce
Confidence 3789999999 468888875431 12344456668899999999996 89999999999999999999999999998
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh-------c
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR-------N 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~-------~ 248 (771)
.......... ......+..|++||+..+ ..++.++|+|||||++||+++ |..|+...... .
T Consensus 148 ~~~~~~~~~~-----~~~~~~~~~~~aPe~~~~------~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 216 (256)
T cd05112 148 RFVLDDQYTS-----STGTKFPVKWSSPEVFSF------SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINA 216 (256)
T ss_pred eecccCcccc-----cCCCccchhhcCHhHhcc------CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhC
Confidence 7654321100 011122347999999875 356678999999999999998 77777533211 1
Q ss_pred ------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 249 ------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 249 ------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
....+..+.+++.+||+.+|++||++.++++.
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 217 GFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 12246778999999999999999999998864
No 341
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.96 E-value=2.2e-28 Score=257.01 Aligned_cols=226 Identities=17% Similarity=0.198 Sum_probs=171.8
Q ss_pred CCCCCCC-CceEEEEeEECCCCC-------cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGS-------PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~-------~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
+.||.|+ | +||+|.++.++. .|++|.+.... ....+.+.+|+.+++.+.||||+++++.+...
T Consensus 1 ~~lg~G~~~--~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~----- 71 (258)
T cd05078 1 ESLGQGTFT--KIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVCG----- 71 (258)
T ss_pred CCCCcccch--hheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEeC-----
Confidence 4688887 8 999999876554 48888876432 23455678899999999999999999999863
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc-------
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD------- 167 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~------- 167 (771)
...|+||||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++.
T Consensus 72 ---~~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~-~~iiH~dlkp~nili~~~~~~~~~~~~ 145 (258)
T cd05078 72 ---DESIMVQEYVKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLED-KGLTHGNVCAKNVLLIREEDRKTGNPP 145 (258)
T ss_pred ---CCcEEEEecCCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCccceEEEecccccccCCCc
Confidence 3789999999 579999876542 12334455669999999999996 99999999999999988776
Q ss_pred -EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCC-CCCChhh
Q 004157 168 -WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSKTEE 245 (771)
Q Consensus 168 -~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~-~p~~~~~ 245 (771)
+||+|||++....... .......|+|||++.+. ..++.++|+|||||++|++++|. +++....
T Consensus 146 ~~~l~d~g~~~~~~~~~----------~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~ 210 (258)
T cd05078 146 FIKLSDPGISITVLPKE----------ILLERIPWVPPECIENP-----QNLSLAADKWSFGTTLWEIFSGGDKPLSALD 210 (258)
T ss_pred eEEecccccccccCCch----------hccccCCccCchhccCC-----CCCCchhhHHHHHHHHHHHHcCCCCChhhcc
Confidence 5899999876543211 11233479999998753 34567899999999999999985 4443211
Q ss_pred h-------hccCC----CCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 L-------RNTAS----IPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 l-------~~~~~----IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. ..... ++..+.+++.+||+.+|++||++.++++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 211 SQKKLQFYEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred HHHHHHHHHccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 1 11122 33568899999999999999999999864
No 342
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=7.2e-29 Score=274.44 Aligned_cols=242 Identities=15% Similarity=0.211 Sum_probs=190.1
Q ss_pred CCCCc-eecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC--CCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 17 KDLPY-NIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT--NAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 17 ~~~~Y-~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~--~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
++.+| ...+.+|.|. - +||+|.+-.+|-.||--.+... ......++++..|++.||.|+||||+++|++|.+..
T Consensus 37 p~gRy~k~~evLGrGafK--tVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~ 114 (632)
T KOG0584|consen 37 PTGRYLKFDEVLGRGAFK--TVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD 114 (632)
T ss_pred CCCceeehhhhcccccce--eeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCC
Confidence 44555 5567889987 5 9999999999988874433321 122355789999999999999999999999999876
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcC-CCceecCCCCCCEEEcC-CCcE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNND-CKLVHGNVCLSSVVVTQ-TLDW 168 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~-~~ivH~dIkp~NI~v~~-~G~~ 168 (771)
+.++.+|||.+ |.|..|+++.+.- ....++.+.+||++||.|||+. --|||||||.+|||||. .|++
T Consensus 115 ------n~~in~iTEL~TSGtLr~Y~kk~~~v---n~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~V 185 (632)
T KOG0584|consen 115 ------NKTINFITELFTSGTLREYRKKHRRV---NIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEV 185 (632)
T ss_pred ------CceeeeeeecccCCcHHHHHHHhccC---CHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCce
Confidence 45899999999 6799999987653 3345666699999999999973 26999999999999995 5999
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-h--
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-E-- 245 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-~-- 245 (771)
||||+|+++....... ..-++++.|||||+... .|...+||||||+.|.||.++..|+.-. .
T Consensus 186 KIGDLGLAtl~r~s~a--------ksvIGTPEFMAPEmYEE-------~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A 250 (632)
T KOG0584|consen 186 KIGDLGLATLLRKSHA--------KSVIGTPEFMAPEMYEE-------NYNELVDVYAFGMCMLEMVTSEYPYSECTNPA 250 (632)
T ss_pred eecchhHHHHhhcccc--------ceeccCccccChHHHhh-------hcchhhhhhhhhHHHHHHHhccCChhhhCCHH
Confidence 9999999988765311 11255669999999874 6778999999999999999999887421 1
Q ss_pred --hhc-c--------CCCC-cchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 246 --LRN-T--------ASIP-KSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 246 --l~~-~--------~~IP-~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
++. + ..+. +.+..+|.+||.. .+.|+++.++|.| .||..
T Consensus 251 QIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d-~Ff~~ 301 (632)
T KOG0584|consen 251 QIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKD-PFFDE 301 (632)
T ss_pred HHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhC-hhhcc
Confidence 111 1 1222 3588999999999 9999999999998 67753
No 343
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.96 E-value=5.4e-28 Score=265.63 Aligned_cols=243 Identities=16% Similarity=0.199 Sum_probs=181.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEE-----CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTS-----KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTE 89 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~-----k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e 89 (771)
+..+|++++.||.|+ | +||+|.+ ..+++.|+||++...... .....+.+|+.+|+++ +||||+++++++.
T Consensus 5 ~~~~~~~~~~lG~G~fg--~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (343)
T cd05103 5 PRDRLKLGKPLGRGAFG--QVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILIHIGHHLNVVNLLGACT 81 (343)
T ss_pred chhHhcccccccCCccc--eEEEEeeccCCccccceeEEEEEeccCCCh-HHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence 344699999999999 9 9999984 356789999999754322 3456788899999999 6899999999886
Q ss_pred ecccCcCCcccEEEEEecCC--cchHHHHHHhCCC---------------------------------------------
Q 004157 90 VENIDATSTKITIYIVTEPV--MPLSEKIKELGLE--------------------------------------------- 122 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~--------------------------------------------- 122 (771)
.+ +..+|+||||| ++|.+++......
T Consensus 82 ~~-------~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (343)
T cd05103 82 KP-------GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVE 154 (343)
T ss_pred cC-------CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccC
Confidence 54 24689999999 5798888653210
Q ss_pred -------------------CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCC
Q 004157 123 -------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNN 183 (771)
Q Consensus 123 -------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~ 183 (771)
.......+..++.||+.||.|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~ 233 (343)
T cd05103 155 EKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS-RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDP 233 (343)
T ss_pred CCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCccCeEEEcCCCcEEEEecccccccccCc
Confidence 001122234458899999999996 899999999999999999999999999987653321
Q ss_pred CCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh----h----h------c
Q 004157 184 EAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----L----R------N 248 (771)
Q Consensus 184 ~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~----l----~------~ 248 (771)
.. ........+..|+|||++.+ ..++.++|+|||||++|++++ |..|+.... . . .
T Consensus 234 ~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 303 (343)
T cd05103 234 DY----VRKGDARLPLKWMAPETIFD------RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 303 (343)
T ss_pred ch----hhcCCCCCCcceECcHHhcC------CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCC
Confidence 10 00011122346999998865 356788999999999999997 777764321 0 0 0
Q ss_pred cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 249 TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 249 ~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...++..+.+++.+|+..+|.+||++.+++++
T Consensus 304 ~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 304 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 12245578889999999999999999999876
No 344
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.96 E-value=9.5e-28 Score=252.27 Aligned_cols=235 Identities=16% Similarity=0.176 Sum_probs=181.7
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
..-+|++.+++|.|+ | .||.|... .+..|+||.+... ......+.+|++++++++||||+++++.+.. .
T Consensus 4 ~~~~~~~~~~lg~g~~~--~vy~~~~~-~~~~~~iK~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~--- 73 (260)
T cd05073 4 PRESLKLEKKLGAGQFG--EVWMATYN-KHTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E--- 73 (260)
T ss_pred cccceeEEeEecCccce--EEEEEEec-CCccEEEEecCCC---hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-C---
Confidence 456799999999998 7 99999865 5677999987643 2234567889999999999999999999875 2
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..|++|||+ ++|.+++...... ......+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+||
T Consensus 74 -----~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~aL~~lH~-~~i~H~dl~p~ni~i~~~~~~~l~d~ 146 (260)
T cd05073 74 -----PIYIITEFMAKGSLLDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIEQ-RNYIHRDLRAANILVSASLVCKIADF 146 (260)
T ss_pred -----CeEEEEEeCCCCcHHHHHHhCCcc-ccCHHHHHHHHHHHHHHHHHHHh-CCccccccCcceEEEcCCCcEEECCC
Confidence 579999999 4799998764321 12233355568999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------ 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------ 246 (771)
|++......... .......+..|+|||++.. ..++.++|+|||||++|++++ |..||.....
T Consensus 147 ~~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~------~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~ 215 (260)
T cd05073 147 GLARVIEDNEYT-----AREGAKFPIKWTAPEAINF------GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 215 (260)
T ss_pred cceeeccCCCcc-----cccCCcccccccCHhHhcc------CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 998765432110 0111122347999999875 356678999999999999998 7777753211
Q ss_pred -------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 -------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 -------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|..+.+++.+|+..+|.+||++.++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 216 LERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 112356778999999999999999999988764
No 345
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.96 E-value=4.2e-28 Score=280.23 Aligned_cols=465 Identities=18% Similarity=0.218 Sum_probs=296.8
Q ss_pred CceecCCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCch--hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQD--GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~g~wtVy~g~~k~~g~~VaIK~~~~~~~~~--~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
.|...+.+|.+. ..+|.+|++++ | .|.||+|-+....- ...++...|++ .+.++|||++.|..+.+++
T Consensus 24 e~~~~~~LGstR-FlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~------ 93 (1431)
T KOG1240|consen 24 ECHYVENLGSTR-FLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTD------ 93 (1431)
T ss_pred ceeeecccCchh-hhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhh------
Confidence 466777788765 22788887652 4 49999998754221 22333334555 6777999999999998764
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
...|+|-+|+ ..|++.|..+++.. .-..+|+++||++||+.+|+ .|++|||||.+||+|+.-..+.|.||.--
T Consensus 94 --kAAylvRqyvkhnLyDRlSTRPFL~---~iEKkWiaFQLL~al~qcH~-~gVcHGDIKsENILiTSWNW~~LtDFAsF 167 (1431)
T KOG1240|consen 94 --KAAYLVRQYVKHNLYDRLSTRPFLV---LIEKKWIAFQLLKALSQCHK-LGVCHGDIKSENILITSWNWLYLTDFASF 167 (1431)
T ss_pred --HHHHHHHHHHhhhhhhhhccchHHH---HHHHHHHHHHHHHHHHHHHH-cCccccccccceEEEeeechhhhhccccc
Confidence 3679999999 57999998887643 23367889999999999996 99999999999999999999999999865
Q ss_pred cccCCCCCCCCCCccc--cccccCCCCCChhcccccc--ccccCC---CCCcchHHHHHHHHHHHhh-CCCCCChhhhhc
Q 004157 177 SEFDGNNEAANGPMLQ--YAWLVGAQYKPVELAKSDW--TAVRKS---PPWSIDSWGLGCLIYELFS-GMRLSKTEELRN 248 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~--~~~~~~~~Y~aPE~~~~~~--~~~~~~---~~~~~Di~SLG~li~el~~-g~~p~~~~~l~~ 248 (771)
+..--..+. ...+.- -.......|.|||.+.... ....+. ...+.||||+||+|.|||. |.|+|...++-.
T Consensus 168 KPtYLPeDN-Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~a 246 (1431)
T KOG1240|consen 168 KPTYLPEDN-PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLA 246 (1431)
T ss_pred CCccCCCCC-cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHh
Confidence 433221111 111110 1112234899999986522 111111 3578999999999999998 578887655422
Q ss_pred ------------cCCCC-cchHHHHHHHhccCCCCCCChHHHhhC------CCCCcchhhhhhhhhhhhc----------
Q 004157 249 ------------TASIP-KSLLPDYQRLLSSMPSRRLNSSKLIEN------SEYFQNKLVDTIHFMEILN---------- 299 (771)
Q Consensus 249 ------------~~~IP-~~l~~~i~~lL~~~P~~Rps~~~lL~~------~~fF~n~lv~~~~~L~~l~---------- 299 (771)
+..|+ ..+++++..|++.+|++|.+++++|+. +.||..-+.+.+..+..+.
T Consensus 247 Yr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~FP~yFy~FL~~Y~~~~~~~~~~~p~~~~~~ 326 (1431)
T KOG1240|consen 247 YRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGLVFPEYFYSFLYDYLDRFVPLTTSTPISDNTC 326 (1431)
T ss_pred HhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhhhccccHHHHHHHHHHHHHhcCCccccCccccccc
Confidence 12343 368999999999999999999999987 2344443333333332222
Q ss_pred ----------------------------------------cCChhhHHh-----------------hhhhchhhhcCC--
Q 004157 300 ----------------------------------------LKDSVEKDT-----------------FFRKLPNLAEQL-- 320 (771)
Q Consensus 300 ----------------------------------------~k~~~eK~~-----------------F~~~L~~~l~~f-- 320 (771)
..+.+|+.. +.++|......+
T Consensus 327 ~gs~i~d~~~~~~~p~n~~~~~~~~~~h~ln~~~~~~~~~~~S~De~~~~~~~al~~~r~~~~~l~~~~dl~~~~q~~~~ 406 (1431)
T KOG1240|consen 327 TGSTIEDNVKLLDGPTNKIYRDFSQICHCLNFPLIKDGGTITSSDEIIDSISKALEFSRHLIENLDVIQDLKPEKQLWTA 406 (1431)
T ss_pred cCcccccccccccCcccchhhhhhccccccccccccccccccCCcHHHHHHHHHHhhhhhhcccchhhhccchHHhcccc
Confidence 111111111 111111110100
Q ss_pred --------ChhhhhhhhHHHHHHHHhcCCC---CchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhH
Q 004157 321 --------PRQIVLKKLLPLLASALEFGSA---AAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHI 389 (771)
Q Consensus 321 --------P~~~~~~kILP~Ll~~~~~~~~---~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l 389 (771)
|..-..-.+++.|...+..-.. ...+|.-+..++..++.|.--..|+|.++.||.+++..||...|+-|
T Consensus 407 ~~~~~~~~~~~~ga~l~vs~lts~IR~lk~~~tK~~ALeLl~~lS~~i~de~~LDRVlPY~v~l~~Ds~a~Vra~Al~Tl 486 (1431)
T KOG1240|consen 407 RSSPNIKDPKEEGAVLFVSVLTSCIRALKTIQTKLAALELLQELSTYIDDEVKLDRVLPYFVHLLMDSEADVRATALETL 486 (1431)
T ss_pred cCCcccCCccccceeeeHHHHHHHHHhhhcchhHHHHHHHHHHHhhhcchHHHHhhhHHHHHHHhcCchHHHHHHHHHHH
Confidence 1122223345555555543222 22344555667778888888899999999999999999999888888
Q ss_pred HHHHhh------cChhhhhhccHHHHHhhcCC-CcHHHHHHHHHHHHhhccC----------------CCh---------
Q 004157 390 DQYGQS------FSAQVVDEQVYPHVATGFAD-TSAFLREMTLKSMLVLAPK----------------LSQ--------- 437 (771)
Q Consensus 390 ~~~~~~------l~~~~v~~~I~p~l~~gf~D-~~~~iRe~tlk~i~~l~~k----------------L~~--------- 437 (771)
..++.. .+..++.+.|||++-....| ++..||-+-...|..++.- +++
T Consensus 487 t~~L~~Vr~~~~~daniF~eYlfP~L~~l~~d~~~~~vRiayAsnla~LA~tA~rFle~~q~~~~~g~~n~~nset~~~~ 566 (1431)
T KOG1240|consen 487 TELLALVRDIPPSDANIFPEYLFPHLNHLLNDSSAQIVRIAYASNLAQLAKTAYRFLELTQELRQAGMLNDPNSETAPEQ 566 (1431)
T ss_pred HHHHhhccCCCcccchhhHhhhhhhhHhhhccCccceehhhHHhhHHHHHHHHHHHHHHHHHHHhcccccCccccccccc
Confidence 777543 35668889999999998888 4545555444444333211 111
Q ss_pred --h----HHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhh
Q 004157 438 --R----TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGA 502 (771)
Q Consensus 438 --~----~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a 502 (771)
. .|...+=..+..|.+|+++-||-...--|+.|+-+.++..-..+|++-+- .-|.|..+.-|-|
T Consensus 567 ~~~~~~~~L~~~V~~~v~sLlsd~~~~Vkr~Lle~i~~LC~FFGk~ksND~iLshLi-TfLNDkDw~LR~a 636 (1431)
T KOG1240|consen 567 NYNTELQALHHTVEQMVSSLLSDSPPIVKRALLESIIPLCVFFGKEKSNDVILSHLI-TFLNDKDWRLRGA 636 (1431)
T ss_pred ccchHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHhhhcccccchHHHHH-HHhcCccHHHHHH
Confidence 1 11222223445555677777776666667777777666665666666666 6666666666654
No 346
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.96 E-value=8.3e-28 Score=253.67 Aligned_cols=226 Identities=17% Similarity=0.185 Sum_probs=169.7
Q ss_pred CCCCCCC-CceEEEEeEECCC------------CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 25 DPYPSAW-GSWSHFQGTSKDD------------GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~------------g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
+.+|.|. | +||+|+.... ...|+||+++... ......+.+|+.+++.++||||+++++++..+
T Consensus 1 ~~lg~G~~~--~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRT--QIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcc--eEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 4678887 8 9999986422 2358889876532 23445678899999999999999999998753
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc--
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD-- 167 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~-- 167 (771)
...|+||||+ ++|..++..... ......+..++.||+.||.|||+ .+++||||||+||+++.+|.
T Consensus 77 --------~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~~~~~~ 145 (262)
T cd05077 77 --------VENIMVEEFVEFGPLDLFMHRKSD--VLTTPWKFKVAKQLASALSYLED-KDLVHGNVCTKNILLAREGIDG 145 (262)
T ss_pred --------CCCEEEEecccCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHhhh-CCeECCCCCcccEEEecCCccC
Confidence 3679999999 468777765321 12334455669999999999996 89999999999999987765
Q ss_pred -----EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHh-hCCCCC
Q 004157 168 -----WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELF-SGMRLS 241 (771)
Q Consensus 168 -----~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~-~g~~p~ 241 (771)
+||+|||++....... ....+..|+|||++... ..++.++|+|||||++|||+ +|..|+
T Consensus 146 ~~~~~~~l~d~g~~~~~~~~~----------~~~~~~~y~aPE~~~~~-----~~~~~~~DiwslG~~l~el~~~~~~p~ 210 (262)
T cd05077 146 ECGPFIKLSDPGIPITVLSRQ----------ECVERIPWIAPECVEDS-----KNLSIAADKWSFGTTLWEICYNGEIPL 210 (262)
T ss_pred CCCceeEeCCCCCCccccCcc----------cccccccccChhhhcCC-----CCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence 8999999886553211 11234579999987642 35677899999999999997 566666
Q ss_pred Chhhhh-----------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 242 KTEELR-----------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 242 ~~~~l~-----------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...... .....+..+.+++.+||+.+|.+||+..+++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 211 KDKTLAEKERFYEGQCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred CCcchhHHHHHHhcCccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 432211 112345678899999999999999999999875
No 347
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.96 E-value=5.9e-28 Score=254.57 Aligned_cols=232 Identities=16% Similarity=0.203 Sum_probs=176.0
Q ss_pred CCCCCC-CceEEEEeEECCCC------CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 26 PYPSAW-GSWSHFQGTSKDDG------SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g------~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.+|.|+ | .||+|+.+..+ ..|+||.+..... ......+.+|+..++.++||||+++++++...
T Consensus 2 ~lg~g~~g--~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 71 (269)
T cd05044 2 FLGSGAFG--EVYEGTATDILGPGSGPIRVAVKTLRKGAT-DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLN------- 71 (269)
T ss_pred ccccccce--eEEeeeecccccCcccceeehhhhhhcccc-hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCC-------
Confidence 577776 7 89999987544 6899999865422 23455688899999999999999999998753
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCC----CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-----c
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLE----GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-----D 167 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~----~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G-----~ 167 (771)
...|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++|+||+|+||+++.++ .
T Consensus 72 -~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~~~~~ 149 (269)
T cd05044 72 -EPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ-MHFIHRDLAARNCLVSEKGYDADRV 149 (269)
T ss_pred -CCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh-CCcccCCCChheEEEecCCCCCCcc
Confidence 3789999999 5799998764321 112233455668999999999996 8999999999999999888 8
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh-
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE- 245 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~- 245 (771)
+||+|||++.......... .......+..|+|||++.+. .++.++|+|||||++|+|++ |..|+....
T Consensus 150 ~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~ellt~g~~p~~~~~~ 219 (269)
T cd05044 150 VKIGDFGLARDIYKSDYYR----KEGEGLLPVRWMAPESLLDG------KFTTQSDVWSFGVLMWEILTLGQQPYPALNN 219 (269)
T ss_pred eEECCcccccccccccccc----cCcccCCCccccCHHHHccC------CcccchhHHHHHHHHHHHHHcCCCCCcccCH
Confidence 9999999987654321100 01111234579999998763 56789999999999999998 877764321
Q ss_pred ------------hhccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 246 ------------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 246 ------------l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
......+|..+.+++.+||..+|.+||++.++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 220 QEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred HHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 1112456788999999999999999999999875
No 348
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.96 E-value=1.1e-27 Score=254.89 Aligned_cols=232 Identities=14% Similarity=0.195 Sum_probs=177.2
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHH---HHHHhcCCCCCeeEEeeeEEecccCcCCcccE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNG---VKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~e---i~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
||.|+ | +||+|.+..+++.|+||++.++.... .......+| ++.++...||+|+++++.++.. ..
T Consensus 2 ig~g~~g--~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~ 71 (278)
T cd05606 2 IGRGGFG--EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP--------DK 71 (278)
T ss_pred cccCCCe--EEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecC--------CE
Confidence 57776 7 99999999999999999998653321 111223333 4455566899999999999864 38
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+|+||||+ ++|..++..... .....+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||++...
T Consensus 72 ~~~v~e~~~g~~L~~~l~~~~~---l~~~~~~~~~~ql~~~l~~lH~-~~i~H~di~p~nili~~~~~~kl~dfg~~~~~ 147 (278)
T cd05606 72 LSFILDLMNGGDLHYHLSQHGV---FSEAEMRFYAAEIILGLEHMHN-RFVVYRDLKPANILLDEHGHVRISDLGLACDF 147 (278)
T ss_pred EEEEEecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHH-CCEEcCCCCHHHEEECCCCCEEEccCcCcccc
Confidence 99999999 468888865432 2344566779999999999996 89999999999999999999999999998765
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh------hh------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------LR------ 247 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~------l~------ 247 (771)
.... .....+...|+|||++.++ ..++.++|+|||||++|+|++|..||.... ..
T Consensus 148 ~~~~--------~~~~~~~~~y~aPE~~~~~-----~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 214 (278)
T cd05606 148 SKKK--------PHASVGTHGYMAPEVLQKG-----VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM 214 (278)
T ss_pred CccC--------CcCcCCCcCCcCcHHhcCC-----CCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhcc
Confidence 4321 1112345589999998643 246678999999999999999998875331 00
Q ss_pred ---ccCCCCcchHHHHHHHhccCCCCCC-----ChHHHhhCCCCCcc
Q 004157 248 ---NTASIPKSLLPDYQRLLSSMPSRRL-----NSSKLIENSEYFQN 286 (771)
Q Consensus 248 ---~~~~IP~~l~~~i~~lL~~~P~~Rp-----s~~~lL~~~~fF~n 286 (771)
....++..+.+++.+||..+|.+|+ ++.++++| +||+.
T Consensus 215 ~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~-~~~~~ 260 (278)
T cd05606 215 AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH-PFFRS 260 (278)
T ss_pred CCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC-ccccC
Confidence 0123567889999999999999999 99999998 56654
No 349
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.96 E-value=1.4e-27 Score=252.21 Aligned_cols=238 Identities=16% Similarity=0.205 Sum_probs=169.8
Q ss_pred CCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
+||.|+ | +||+|+... ....|+||.+.... .......+.+|++.++.++||||+++++.+... ..+
T Consensus 2 ~lg~G~fg--~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~--------~~~ 70 (269)
T cd05042 2 EIGNGWFG--KVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIES--------IPY 70 (269)
T ss_pred cCCccCCc--eEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCC--------Cce
Confidence 578888 8 999997543 34568888765432 233455678899999999999999999998753 378
Q ss_pred EEEecCC--cchHHHHHHhCCC--CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 103 YIVTEPV--MPLSEKIKELGLE--GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~--~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
|+||||+ ++|.+++...... .......+..++.||+.||.|||+ .+++||||||+|||++.++.+||+|||++..
T Consensus 71 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 149 (269)
T cd05042 71 LLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ-ADFIHSDLALRNCQLTADLSVKIGDYGLALE 149 (269)
T ss_pred EEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh-cCEecccccHhheEecCCCcEEEeccccccc
Confidence 9999999 5899998775421 112234456679999999999996 8999999999999999999999999999865
Q ss_pred cCCCCCCCCCCccccccccCCCCCChhcccccccc-ccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh----hh----c
Q 004157 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA-VRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----LR----N 248 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~-~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~----l~----~ 248 (771)
....... ........+..|+|||+....... ....++.++|+|||||++|||++ |..|+.... +. .
T Consensus 150 ~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~ 225 (269)
T cd05042 150 QYPEDYY----ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVRE 225 (269)
T ss_pred cccchhe----eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhc
Confidence 4321100 001111233479999997542111 11345679999999999999998 556653221 10 0
Q ss_pred ----------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 249 ----------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 249 ----------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...++..+..++..|+ .+|.+||++.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~ 266 (269)
T cd05042 226 QDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHEL 266 (269)
T ss_pred cCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHH
Confidence 0134455666777776 599999999998753
No 350
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.3e-29 Score=296.94 Aligned_cols=245 Identities=17% Similarity=0.264 Sum_probs=198.6
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
-.++++-+..||.|. | .||-|.+.++|+-.|+|.+..........+.+.+|+++|..|+|||++++|++-.+
T Consensus 1233 V~~rWqrg~~Ig~G~fG--~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH----- 1305 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFG--KVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH----- 1305 (1509)
T ss_pred ceeeeccccccCCccee--eeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec-----
Confidence 368899999999998 9 99999999999999999998765555667888999999999999999999988665
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
...+||.|||| +.|.+.++..+.. .+....|+..|++.||.|||+ .|||||||||.|||++.+|.+|++||
T Consensus 1306 ---Rekv~IFMEyC~~GsLa~ll~~gri~---dE~vt~vyt~qll~gla~LH~-~gIVHRDIK~aNI~Ld~~g~iK~~DF 1378 (1509)
T KOG4645|consen 1306 ---REKVYIFMEYCEGGSLASLLEHGRIE---DEMVTRVYTKQLLEGLAYLHE-HGIVHRDIKPANILLDFNGLIKYGDF 1378 (1509)
T ss_pred ---HHHHHHHHHHhccCcHHHHHHhcchh---hhhHHHHHHHHHHHHHHHHHh-cCceecCCCccceeeecCCcEEeecc
Confidence 34789999999 5798888765432 234567889999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------- 245 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-------- 245 (771)
|.+..+...-....+.+ ....++.-|||||++.+.-. ++..-+.|||||||++.||.+|+.|+..-+
T Consensus 1379 Gsa~ki~~~~~~~~~el--~~~~GT~~YMAPEvit~t~~---kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~ 1453 (1509)
T KOG4645|consen 1379 GSAVKIKNNAQTMPGEL--QSMMGTPMYMAPEVITGTKG---KGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYH 1453 (1509)
T ss_pred cceeEecCchhcCCHHH--HhhcCCchhcCchhhccccc---CCCCcchhhhcccceEEEeecCCCchhhccchhHHHhH
Confidence 99988765421111111 12355668999999987422 455679999999999999999999875322
Q ss_pred --hhccCCCCc----chHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 --LRNTASIPK----SLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 --l~~~~~IP~----~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....++|. .-.+++.+||..||++|.++.|+++|
T Consensus 1454 V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1454 VAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred HhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 112345554 45677999999999999999999998
No 351
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.95 E-value=8.9e-28 Score=252.12 Aligned_cols=239 Identities=17% Similarity=0.221 Sum_probs=183.0
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC---chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA---QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~---~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
+|.+.+.||.|+ | +||++++...+..+.+|++..... .......+.+|+.+++.++||||+++++.+...
T Consensus 1 ~y~i~~~ig~g~~g--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 74 (260)
T cd08222 1 RYILQQRLGKGSFG--TVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLER---- 74 (260)
T ss_pred CceeeeeecCCCCc--eEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcC----
Confidence 599999999998 8 999999988877787777654221 122334566789999999999999999998763
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
...|+||||+ ++|.+++..... ........+..++.|++.||.|||+ .+++||||+|+||+++. +.+||+|
T Consensus 75 ----~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~i~h~~l~~~nili~~-~~~~l~d 148 (260)
T cd08222 75 ----DAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ-RRILHRDLKAKNIFLKN-NLLKIGD 148 (260)
T ss_pred ----CceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH-cCccccCCChhheEeec-CCEeecc
Confidence 3789999999 478888765322 1223344566679999999999996 89999999999999975 6799999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh-----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR----- 247 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~----- 247 (771)
||++......... .........|++||...+ ..++.++|+||||+++|++++|..++......
T Consensus 149 ~g~~~~~~~~~~~------~~~~~~~~~~~~pe~~~~------~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~ 216 (260)
T cd08222 149 FGVSRLLMGSCDL------ATTFTGTPYYMSPEALKH------QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLR 216 (260)
T ss_pred cCceeecCCCccc------ccCCCCCcCccCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 9998766432111 111123447999998765 34567899999999999999999887543211
Q ss_pred --------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 248 --------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 248 --------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
....++..+.+++.+|+..+|.+||++.++++|++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 259 (260)
T cd08222 217 IVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPF 259 (260)
T ss_pred HHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCC
Confidence 01245678889999999999999999999999854
No 352
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.95 E-value=1.4e-27 Score=267.68 Aligned_cols=243 Identities=16% Similarity=0.161 Sum_probs=182.9
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEEC-----CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeE
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSK-----DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHST 88 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k-----~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~ 88 (771)
++...|.+++.||.|+ | .||+|+++ ..+..|+||++...... ...+.+.+|+++|.+|. ||||+++++.+
T Consensus 34 ~~~~~~~~~~~lG~G~fG--~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFG--RVVEATAHGLSHSQSTMKVAVKMLKSTARS-SEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred ecHHHeehhhhccCCCce--eEEEEEEcCCCCCCCceEEEEEecCCCCCh-hHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 3445688899999998 8 99999964 34568999999764332 33456889999999997 99999999998
Q ss_pred EecccCcCCcccEEEEEecCC--cchHHHHHHhCCC--------------------------------------------
Q 004157 89 EVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE-------------------------------------------- 122 (771)
Q Consensus 89 e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------------------------------------------- 122 (771)
... ..+||||||| ++|.++|......
T Consensus 111 ~~~--------~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (401)
T cd05107 111 TKG--------GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMS 182 (401)
T ss_pred ccC--------CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccC
Confidence 763 3789999999 6899998754210
Q ss_pred ---------------------------------------------------CCCcHHHHHHHHHHHHHHHHHHHcCCCce
Q 004157 123 ---------------------------------------------------GSQRDEYYAWGLNQIAKAVSFLNNDCKLV 151 (771)
Q Consensus 123 ---------------------------------------------------~~~~~~~i~~gl~QI~~aL~fLH~~~~iv 151 (771)
.......+..++.||+.||.|||+ .+++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~iv 261 (401)
T cd05107 183 KDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS-KNCV 261 (401)
T ss_pred CccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc-CCcC
Confidence 000111234458899999999996 8999
Q ss_pred ecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHH
Q 004157 152 HGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLI 231 (771)
Q Consensus 152 H~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li 231 (771)
||||||+||+++.++.+||+|||+++........ ........+..|++||++.+ ..++.++|+|||||++
T Consensus 262 Hrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~------~~~~~~~DvwslGvil 331 (401)
T cd05107 262 HRDLAARNVLICEGKLVKICDFGLARDIMRDSNY----ISKGSTFLPLKWMAPESIFN------NLYTTLSDVWSFGILL 331 (401)
T ss_pred cccCCcceEEEeCCCEEEEEecCcceeccccccc----ccCCCcCCCCceeChHHhcC------CCCCcHhHHHHHHHHH
Confidence 9999999999999999999999998765332110 00111123457999999865 3466789999999999
Q ss_pred HHHhh-CCCCCChhhh--------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 232 YELFS-GMRLSKTEEL--------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 232 ~el~~-g~~p~~~~~l--------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
|||++ |..|+..... .....++..+.+++.+|+..+|..||++.++++.
T Consensus 332 ~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 332 WEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred HHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99998 6766642110 0112356778899999999999999999998864
No 353
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.95 E-value=1e-27 Score=255.91 Aligned_cols=245 Identities=16% Similarity=0.238 Sum_probs=186.0
Q ss_pred CceecCCCCCCC-CceEEEEeEEC---CCCCcEEEEEEeCCCC--chhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSK---DDGSPVSIFSISGTNA--QDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVEN 92 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k---~~g~~VaIK~~~~~~~--~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~ 92 (771)
.|++.+.||.|+ | .||.+++. .+++.|+||++.+... .....+.+.+|++++++++ ||||+++++.++..
T Consensus 1 ~~~~~~~ig~G~~~--~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~- 77 (288)
T cd05583 1 NFELLRVLGTGAYG--KVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTD- 77 (288)
T ss_pred CceEEEEeccCCCc--eEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecC-
Confidence 488999999998 8 89988864 4678999999975322 1234566789999999995 99999999998763
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
..+|+||||+ ++|.+++..... .....+..++.|++.+|.|||+ .+++||||+|.||+++.++.++|
T Consensus 78 -------~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~ql~~~l~~lH~-~~~~H~dl~p~nil~~~~~~~~l 146 (288)
T cd05583 78 -------TKLHLILDYVNGGELFTHLYQREH---FTESEVRVYIAEIVLALDHLHQ-LGIIYRDIKLENILLDSEGHVVL 146 (288)
T ss_pred -------CEEEEEEecCCCCcHHHHHhhcCC---cCHHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHeEECCCCCEEE
Confidence 4889999999 478888765432 2234455668899999999996 89999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----- 245 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----- 245 (771)
+|||++........ .......+...|++||...+.. ...+.++|+||||+++|+|++|..|+....
T Consensus 147 ~dfg~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~----~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~ 217 (288)
T cd05583 147 TDFGLSKEFLAEEE-----ERAYSFCGTIEYMAPEVIRGGS----GGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQ 217 (288)
T ss_pred EECccccccccccc-----cccccccCCccccCHHHhcCCC----CCCcchhhhHHHHHHHHHHHhCCCCcccCcccchH
Confidence 99999876543211 1111223445899999976531 135678999999999999999998874211
Q ss_pred --h-----h----ccCCCCcchHHHHHHHhccCCCCCCC---hHHHhhCCCCCcchh
Q 004157 246 --L-----R----NTASIPKSLLPDYQRLLSSMPSRRLN---SSKLIENSEYFQNKL 288 (771)
Q Consensus 246 --l-----~----~~~~IP~~l~~~i~~lL~~~P~~Rps---~~~lL~~~~fF~n~l 288 (771)
+ . ....++..+.+++.+||+.+|+.||+ +.++++| .||++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~-~~~~~~~ 273 (288)
T cd05583 218 SEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH-PFFQGID 273 (288)
T ss_pred HHHHHHHHccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC-cccccCC
Confidence 0 0 01235677899999999999999998 4566877 6777643
No 354
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.95 E-value=2.2e-27 Score=255.79 Aligned_cols=238 Identities=17% Similarity=0.192 Sum_probs=180.9
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
...|++.+.||.|+ | .||+|+++.+|. .|++|.+..... ......+.+|+.+++.++||||+++++.+...
T Consensus 6 ~~~~~~~~~lg~G~~g--~vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~- 81 (303)
T cd05110 6 ETELKRVKVLGSGAFG--TVYKGIWVPEGETVKIPVAIKILNETTG-PKANVEFMDEALIMASMDHPHLVRLLGVCLSP- 81 (303)
T ss_pred hhhceeccccccCCCc--cEEEEEEecCCCcceeeEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-
Confidence 34688899999998 8 899999988876 468888764322 23344678899999999999999999988642
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
..++++||+ ++|.+++...... .....+..+++||+.||.|||+ .+++||||||+||+++.++.+||
T Consensus 82 --------~~~~v~e~~~~g~l~~~~~~~~~~--~~~~~~~~~~~qi~~~L~~LH~-~~ivH~dikp~Nill~~~~~~kL 150 (303)
T cd05110 82 --------TIQLVTQLMPHGCLLDYVHEHKDN--IGSQLLLNWCVQIAKGMMYLEE-RRLVHRDLAARNVLVKSPNHVKI 150 (303)
T ss_pred --------CceeeehhcCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHhh-cCeeccccccceeeecCCCceEE
Confidence 467999999 5798888764321 2233455668999999999996 89999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh---h
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE---L 246 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~---l 246 (771)
+|||+++........ ........+..|++||++.+ ..++.++|+|||||++||+++ |..|+.... .
T Consensus 151 ~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~------~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~ 220 (303)
T cd05110 151 TDFGLARLLEGDEKE----YNADGGKMPIKWMALECIHY------RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI 220 (303)
T ss_pred ccccccccccCcccc----cccCCCccccccCCHHHhcc------CCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 999999876532110 11111223457999999865 356788999999999999997 777764321 1
Q ss_pred h----c------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 R----N------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ~----~------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
. . ....+..+..++.+|+..+|..||++.++++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 221 PDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred HHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 1 0 12245568888999999999999999998764
No 355
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=9.8e-29 Score=265.94 Aligned_cols=237 Identities=20% Similarity=0.337 Sum_probs=186.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC------CCCeeEEeeeEEecc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR------HPNILAFLHSTEVEN 92 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr------HPnIlkv~d~~e~e~ 92 (771)
+|.+....|.|- + +|..|.+..-|..||||++.. ++...+.-..|+++|++|. --++|+++..|..
T Consensus 433 RY~V~~~~GkGvFs--~Vvra~D~~r~~~vAiKIIRn---NE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h-- 505 (752)
T KOG0670|consen 433 RYEVQGYTGKGVFS--TVVRARDQARGQEVAIKIIRN---NEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH-- 505 (752)
T ss_pred eeEEEeccccceee--eeeeccccCCCCeeEEEEeec---chHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh--
Confidence 444444445554 5 899999988899999999974 3444566788999999995 2378999988887
Q ss_pred cCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC-CcEEE
Q 004157 93 IDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-LDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~-G~~KL 170 (771)
++++|+|+|.+ ..|.++|+..+..-......+..+.+|++.||..|.. |+++|+||||+||+||+. ...||
T Consensus 506 ------knHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~-c~vlHaDIKPDNiLVNE~k~iLKL 578 (752)
T KOG0670|consen 506 ------KNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK-CGVLHADIKPDNILVNESKNILKL 578 (752)
T ss_pred ------cceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh-cCeeecccCccceEeccCcceeee
Confidence 56999999999 7999999998765444455567779999999999996 999999999999999986 45899
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----h
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----L 246 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l 246 (771)
||||-+....... + ..+++...|.|||++.| ..|.+.+|+||.||.|||||+|..+|.... +
T Consensus 579 CDfGSA~~~~ene------i--tPYLVSRFYRaPEIiLG------~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~ML 644 (752)
T KOG0670|consen 579 CDFGSASFASENE------I--TPYLVSRFYRAPEIILG------LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQML 644 (752)
T ss_pred ccCcccccccccc------c--cHHHHHHhccCcceeec------CcccCCccceeeceeeEEeeccceecCCCCcHHHH
Confidence 9999998776532 1 22466678999999998 478889999999999999999987764311 0
Q ss_pred h-------------------------------------------------------------ccCCCCc-------chHH
Q 004157 247 R-------------------------------------------------------------NTASIPK-------SLLP 258 (771)
Q Consensus 247 ~-------------------------------------------------------------~~~~IP~-------~l~~ 258 (771)
+ ....+|. .+.+
T Consensus 645 rl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rd 724 (752)
T KOG0670|consen 645 RLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRD 724 (752)
T ss_pred HHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHH
Confidence 0 0011332 3677
Q ss_pred HHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 259 DYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 259 ~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
++.+||..||.+|.++.++|.| +||.
T Consensus 725 LLdkml~LdP~KRit~nqAL~H-pFi~ 750 (752)
T KOG0670|consen 725 LLDKMLILDPEKRITVNQALKH-PFIT 750 (752)
T ss_pred HHHHHhccChhhcCCHHHHhcC-Cccc
Confidence 7889999999999999999999 6664
No 356
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.95 E-value=5.9e-27 Score=247.52 Aligned_cols=238 Identities=15% Similarity=0.175 Sum_probs=171.1
Q ss_pred CCCCCC-CceEEEEeEECC--CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSKD--DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~--~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
.||.|+ | .||+|+... ++..+++|.+...... .....+.+|+..+++++||||+++++.+... ..+
T Consensus 2 ~lg~G~~g--~Vy~~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--------~~~ 70 (269)
T cd05087 2 EIGNGWFG--KVILGEVNSGYTPAQVVVKELRVSASV-QEQMKFLEEAQPYRSLQHSNLLQCLGQCTEV--------TPY 70 (269)
T ss_pred cccccCCc--eEEEEEEcCCCCceEEEEEecCCCCCh-HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC--------CCc
Confidence 578887 7 899998653 4567999988754332 2334678899999999999999999988753 368
Q ss_pred EEEecCC--cchHHHHHHhCCC--CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 103 YIVTEPV--MPLSEKIKELGLE--GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~~--~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
|+||||+ ++|.+++...... .......+...+.|++.||.|||+ .+++|+||||+||+++.++.+||+|||++..
T Consensus 71 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~ 149 (269)
T cd05087 71 LLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK-NNFIHSDLALRNCLLTADLTVKIGDYGLSHN 149 (269)
T ss_pred EEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH-CCEeccccCcceEEEcCCCcEEECCcccccc
Confidence 9999999 5799988764321 112233445568899999999996 8999999999999999999999999999865
Q ss_pred cCCCCCCCCCCccccccccCCCCCChhccccccc-cccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh---h-----h-
Q 004157 179 FDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWT-AVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE---L-----R- 247 (771)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~-~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~---l-----~- 247 (771)
...... .........+..|+|||++.+... .....++.++|+|||||++|||++ |..||.... . .
T Consensus 150 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~ 225 (269)
T cd05087 150 KYKEDY----YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVRE 225 (269)
T ss_pred ccCcce----eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhc
Confidence 432211 000111223457999999864211 011234678999999999999996 887764211 0 0
Q ss_pred cc---------CCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 NT---------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 ~~---------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.. ...++.+.+++.+|+ .+|.+||++.+++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~ 266 (269)
T cd05087 226 QQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLL 266 (269)
T ss_pred ccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHH
Confidence 00 123455777888888 689999999998753
No 357
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.95 E-value=3.3e-27 Score=246.99 Aligned_cols=225 Identities=16% Similarity=0.163 Sum_probs=170.8
Q ss_pred CCCCCCC-CceEEEEeEECCCC----------CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDG----------SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g----------~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
+.||.|+ | .||+|+++.++ ..|++|++..... ....+.+|+.+++.++||||+++++++.. .
T Consensus 1 ~~lg~G~~~--~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~- 73 (259)
T cd05037 1 EHLGQGTFT--NIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR---DSLAFFETASLMSQLSHKHLVKLYGVCVR-D- 73 (259)
T ss_pred Ccccccccc--eEEEEEEeccCCccccCCccceeeeeeccccchh---hHHHHHHHHHHHHcCCCcchhheeeEEec-C-
Confidence 4678887 7 99999998776 3577887764321 15677889999999999999999998875 2
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-----
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL----- 166 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G----- 166 (771)
..|+||||+ ++|.+++..... ......+..++.||+.||.|||+ .+++||||||+||+++.++
T Consensus 74 -------~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~~~~ 143 (259)
T cd05037 74 -------ENIMVEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLED-KKLVHGNVCGKNILVARYGLNEGY 143 (259)
T ss_pred -------CcEEEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhh-CCeecccCccceEEEecCccccCC
Confidence 469999999 579998877542 12334456668999999999996 9999999999999999888
Q ss_pred --cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhC-CCCCCh
Q 004157 167 --DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG-MRLSKT 243 (771)
Q Consensus 167 --~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g-~~p~~~ 243 (771)
.+||+|||++....... .......|+|||++.+.- ..++.++|+|||||++|++++| ..++..
T Consensus 144 ~~~~kl~Dfg~a~~~~~~~----------~~~~~~~y~aPE~~~~~~----~~~~~~~Di~slG~~~~~l~~~~~~p~~~ 209 (259)
T cd05037 144 VPFIKLSDPGIPITVLSRE----------ERVERIPWIAPECIRNGQ----ASLTIAADKWSFGTTLLEICSNGEEPLST 209 (259)
T ss_pred ceeEEeCCCCccccccccc----------ccccCCCccChhhhcCCC----CCcchhhHHHHHHHHHHHHHhCCCCCccc
Confidence 79999999987654311 112334799999986521 2466789999999999999985 444432
Q ss_pred hhh-------hcc--CCC--CcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 244 EEL-------RNT--ASI--PKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 244 ~~l-------~~~--~~I--P~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
... ... ... ...+.+++.+||..+|.+||++.++++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 257 (259)
T cd05037 210 LSSSEKERFYQDQHRLPMPDCAELANLINQCWTYDPTKRPSFRAILRD 257 (259)
T ss_pred CCchhHHHHHhcCCCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 211 001 111 2468899999999999999999998864
No 358
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.95 E-value=7.2e-28 Score=242.07 Aligned_cols=236 Identities=15% Similarity=0.146 Sum_probs=183.5
Q ss_pred ecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCCccc
Q 004157 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 23 i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
+...+|+|+ | +|++++.+++|.-.|||.+.+..+.+ ..+++...+.+.-.-. .|+|++++++|..+ .
T Consensus 96 ~l~dlGsGtcG--~V~k~~~rs~~~iiAVK~M~rt~Nke-e~kRILmDldvv~~s~dcpyIV~c~GyFi~n--------~ 164 (391)
T KOG0983|consen 96 NLGDLGSGTCG--QVWKMRFRSTGHIIAVKQMRRTGNKE-ENKRILMDLDVVLKSHDCPYIVQCFGYFITN--------T 164 (391)
T ss_pred hHHhhcCCCcc--ceEEEEEcccceEEEEEeecccCCHH-HHHHHHHhhhHHhhccCCCeeeeeeeEEeeC--------c
Confidence 445678888 8 99999999999999999998765544 4556666666655544 89999999999874 3
Q ss_pred EEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 101 TIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 101 ~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
.++|.||.+. -+..+|++.... ..+..+-.....+++||.||.++.+++||||||+||++++.|++||||||++..+
T Consensus 165 dV~IcMelMs~C~ekLlkrik~p--iPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrl 242 (391)
T KOG0983|consen 165 DVFICMELMSTCAEKLLKRIKGP--IPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRL 242 (391)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCC--chHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeeccccccee
Confidence 6899999984 455555554322 2334455568899999999999899999999999999999999999999999887
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----h--------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----L-------- 246 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-----l-------- 246 (771)
.++.. +....+-..||+||.+.-.- +..|...+|+||||+.++||.+|..|+.... +
T Consensus 243 vdSkA-------htrsAGC~~YMaPERidp~~---~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP 312 (391)
T KOG0983|consen 243 VDSKA-------HTRSAGCAAYMAPERIDPPD---KPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP 312 (391)
T ss_pred ecccc-------cccccCCccccCccccCCCC---CCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC
Confidence 65321 22223345899999986531 2467789999999999999999998886521 1
Q ss_pred ---hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 247 ---RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 247 ---~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
..-..++..+.+++..||..|+.+||...++|+|+
T Consensus 313 P~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~ 350 (391)
T KOG0983|consen 313 PLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHP 350 (391)
T ss_pred CCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCc
Confidence 11123566788999999999999999999999993
No 359
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.95 E-value=9.1e-27 Score=250.19 Aligned_cols=248 Identities=10% Similarity=0.041 Sum_probs=180.0
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCC---CCcEEEEEEeCCCCchhH---------HHHHHHHHHHHhcCCCCCee
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDD---GSPVSIFSISGTNAQDGH---------LAAARNGVKRLRTVRHPNIL 82 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~---g~~VaIK~~~~~~~~~~~---------~~~~~~ei~~Lk~LrHPnIl 82 (771)
+....|++++.||.|+ | +||+|.++.+ +..+++|+.......-.. ......++..++.+.|+||+
T Consensus 9 i~~~~y~i~~~LG~G~fG--~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~ 86 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFG--CVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIP 86 (294)
T ss_pred cCCCceEEeeEEecCCCc--eEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCC
Confidence 3456899999999999 9 9999999887 667788875543221100 01122344566778899999
Q ss_pred EEeeeEEecccCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEE
Q 004157 83 AFLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVV 161 (771)
Q Consensus 83 kv~d~~e~e~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~ 161 (771)
++++........ ....|+++|++ ..+.+.++..... ....+..++.||+.||.|||+ .+++||||||+||+
T Consensus 87 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~qi~~~l~~lH~-~~iiHrDiKp~Nil 158 (294)
T PHA02882 87 KYYGCGSFKRCR----MYYRFILLEKLVENTKEIFKRIKCK---NKKLIKNIMKDMLTTLEYIHE-HGISHGDIKPENIM 158 (294)
T ss_pred cEEEeeeEecCC----ceEEEEEEehhccCHHHHHHhhccC---CHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEE
Confidence 999977654311 23558899988 4566666554211 234466779999999999996 89999999999999
Q ss_pred EcCCCcEEEEccCcccccCCCCCCCCCC-ccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCC
Q 004157 162 VTQTLDWKLHAFDVLSEFDGNNEAANGP-MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240 (771)
Q Consensus 162 v~~~G~~KL~dFgla~~~~~~~~~~~~~-~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p 240 (771)
++.++.+||+|||+++.+.......... .......++..|+|||+..+ ..++.++|+|||||++|||++|..|
T Consensus 159 l~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~------~~~~~~~DiwSlG~~l~el~~g~~P 232 (294)
T PHA02882 159 VDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG------ACVTRRGDLESLGYCMLKWAGIKLP 232 (294)
T ss_pred EcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCC------CCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999998764322111000 00111234558999999876 3577899999999999999999999
Q ss_pred CChhh-------------hh-------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 241 SKTEE-------------LR-------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 241 ~~~~~-------------l~-------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
|.... .. .+...|+.+.++++.|+..+|.+||+..++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 233 WKGFGHNGNLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred CCccccchHHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 85321 01 13466888999999999999999999999875
No 360
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.95 E-value=5.8e-27 Score=249.00 Aligned_cols=225 Identities=17% Similarity=0.147 Sum_probs=166.6
Q ss_pred CCCCCC-CceEEEEeEECCC------------------------CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC
Q 004157 26 PYPSAW-GSWSHFQGTSKDD------------------------GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN 80 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~------------------------g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPn 80 (771)
.||+|+ | .||+|+...+ ...|+||+++... ......+.+|+.+++.++|||
T Consensus 2 ~lG~G~~~--~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~n 77 (274)
T cd05076 2 HLGQGTRT--NIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIH 77 (274)
T ss_pred CcCccccc--ceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCC
Confidence 578887 8 8999885322 2358888886432 223456778899999999999
Q ss_pred eeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCC
Q 004157 81 ILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLS 158 (771)
Q Consensus 81 Ilkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~ 158 (771)
|+++++++... ...|+||||+ ++|..++..... .........++.||+.||.|||+ .+++||||||+
T Consensus 78 iv~~~~~~~~~--------~~~~lv~ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~-~~iiH~dlkp~ 146 (274)
T cd05076 78 LAFVHGVCVRG--------SENIMVEEFVEHGPLDVCLRKEKG--RVPVAWKITVAQQLASALSYLED-KNLVHGNVCAK 146 (274)
T ss_pred eeeEEEEEEeC--------CceEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHc-CCccCCCCCcc
Confidence 99999998763 3789999999 578888765321 12234455679999999999996 89999999999
Q ss_pred CEEEcCCC-------cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHH
Q 004157 159 SVVVTQTL-------DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLI 231 (771)
Q Consensus 159 NI~v~~~G-------~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li 231 (771)
||+++..| .+||+|||++....... ....+..|+|||.+.+. ..++.++|+|||||++
T Consensus 147 Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~----------~~~~~~~~~aPe~~~~~-----~~~~~~~Dv~slG~~l 211 (274)
T cd05076 147 NILLARLGLAEGTSPFIKLSDPGVSFTALSRE----------ERVERIPWIAPECVPGG-----NSLSTAADKWSFGTTL 211 (274)
T ss_pred cEEEeccCcccCccceeeecCCcccccccccc----------ccccCCcccCchhhcCC-----CCCCcHHHHHHHHHHH
Confidence 99998654 38999999875443211 11234579999987653 3466789999999999
Q ss_pred HHHh-hCCCCCChhhh-------hc----cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 232 YELF-SGMRLSKTEEL-------RN----TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 232 ~el~-~g~~p~~~~~l-------~~----~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
||++ .|..|+..... .. ....+..+.+++.+||+.+|.+||++.+++++
T Consensus 212 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 212 LEICFDGEVPLKERTPSEKERFYEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHHHhCCCCCccccChHHHHHHHHhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 9985 67776643211 11 12233568899999999999999999999875
No 361
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.95 E-value=5e-27 Score=243.99 Aligned_cols=214 Identities=14% Similarity=0.159 Sum_probs=166.9
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEEEecCC--cch
Q 004157 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPL 112 (771)
Q Consensus 35 tVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L 112 (771)
+||.+.++.+|+.|++|.+.+.. ...+|...+....||||+++++++... ..+|+||||+ ++|
T Consensus 8 ~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~~~lv~e~~~~~~L 72 (237)
T cd05576 8 KVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSE--------DSVFLVLQHAEGGKL 72 (237)
T ss_pred eEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecC--------CeEEEEEecCCCCCH
Confidence 89999999999999999997542 123345555666799999999998863 4899999999 579
Q ss_pred HHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccc
Q 004157 113 SEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQ 192 (771)
Q Consensus 113 ~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~ 192 (771)
.+++..... .....+..++.|++.||.|||+ .+++||||||+||+++.+|..+|+|||.+.......
T Consensus 73 ~~~l~~~~~---l~~~~~~~~~~ql~~~l~~lH~-~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~--------- 139 (237)
T cd05576 73 WSHISKFLN---IPEECVKRWAAEMVVALDALHR-EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC--------- 139 (237)
T ss_pred HHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHEEEcCCCCEEEecccchhcccccc---------
Confidence 888876532 2344566779999999999996 899999999999999999999999999876654311
Q ss_pred cccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------hccCCCCcchHHHHHHHh
Q 004157 193 YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL--------RNTASIPKSLLPDYQRLL 264 (771)
Q Consensus 193 ~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l--------~~~~~IP~~l~~~i~~lL 264 (771)
........|++||...+ ..++.++|+|||||++||+++|..++..... .....++..+.+++.+||
T Consensus 140 ~~~~~~~~y~aPE~~~~------~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 213 (237)
T cd05576 140 DGEAVENMYCAPEVGGI------SEETEACDWWSLGAILFELLTGKTLVECHPSGINTHTTLNIPEWVSEEARSLLQQLL 213 (237)
T ss_pred ccCCcCccccCCcccCC------CCCCchhhHHHHHHHHHHHHHCcchhhcCchhcccccccCCcccCCHHHHHHHHHHc
Confidence 11122346999998765 3456789999999999999999876542211 111345667888999999
Q ss_pred ccCCCCCCCh-----HHHhhCCC
Q 004157 265 SSMPSRRLNS-----SKLIENSE 282 (771)
Q Consensus 265 ~~~P~~Rps~-----~~lL~~~~ 282 (771)
+.+|.+|+++ .++++|++
T Consensus 214 ~~dp~~R~~~~~~~~~~~~~h~~ 236 (237)
T cd05576 214 QFNPTERLGAGVAGVEDIKSHPF 236 (237)
T ss_pred cCCHHHhcCCCccchHHHHcCCC
Confidence 9999999985 88898844
No 362
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.95 E-value=3.4e-28 Score=255.23 Aligned_cols=239 Identities=20% Similarity=0.235 Sum_probs=189.9
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC--CC----CeeEEeeeEE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR--HP----NILAFLHSTE 89 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr--HP----nIlkv~d~~e 89 (771)
...+|+|.+.+|+|+ | .|-++.++.++..||||++. +-+...+.++-|++.|.+|. -| -++++.++|+
T Consensus 87 l~~Ry~i~~~lGeGtFG--kV~ec~D~~~~~~vAlKIik---~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFd 161 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFG--KVVECWDRETKEHVALKIIK---NVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFD 161 (415)
T ss_pred cccceehhhhhcCCccc--ceEEEeecCCCceehHHHHH---HHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhh
Confidence 367899999999999 9 99999999999999999986 23456778889999999994 23 2777878888
Q ss_pred ecccCcCCcccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC----
Q 004157 90 VENIDATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---- 164 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~---- 164 (771)
. ..++|||+|.++ ++.++|++++..... ...|..+.+||+++++|||+ .+++|-||||+||++..
T Consensus 162 y--------rghiCivfellG~S~~dFlk~N~y~~fp-i~~ir~m~~QL~~sv~fLh~-~kl~HTDLKPENILfvss~~~ 231 (415)
T KOG0671|consen 162 Y--------RGHICIVFELLGLSTFDFLKENNYIPFP-IDHIRHMGYQLLESVAFLHD-LKLTHTDLKPENILFVSSEYF 231 (415)
T ss_pred c--------cCceEEEEeccChhHHHHhccCCccccc-hHHHHHHHHHHHHHHHHHHh-cceeecCCChheEEEeccceE
Confidence 7 349999999998 899999997754433 34467779999999999995 99999999999999832
Q ss_pred ----------------CCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHH
Q 004157 165 ----------------TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLG 228 (771)
Q Consensus 165 ----------------~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG 228 (771)
+-.+||+|||-++...+. .+.-+.+..|+|||++.+ -+++..+|+||+|
T Consensus 232 ~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~---------hs~iVsTRHYRAPEViLg------LGwS~pCDvWSiG 296 (415)
T KOG0671|consen 232 KTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH---------HSTIVSTRHYRAPEVILG------LGWSQPCDVWSIG 296 (415)
T ss_pred EEeccCCccceeccCCCcceEEEecCCcceeccC---------cceeeeccccCCchheec------cCcCCccCceeee
Confidence 244899999998765542 122244569999999987 4677899999999
Q ss_pred HHHHHHhhCCCCCChhh----h--h--ccCCC------------------------------------C-----------
Q 004157 229 CLIYELFSGMRLSKTEE----L--R--NTASI------------------------------------P----------- 253 (771)
Q Consensus 229 ~li~el~~g~~p~~~~~----l--~--~~~~I------------------------------------P----------- 253 (771)
|+++|+++|..+|++.+ + . .++++ |
T Consensus 297 CIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d 376 (415)
T KOG0671|consen 297 CILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDD 376 (415)
T ss_pred eEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCc
Confidence 99999999998886432 1 0 00011 1
Q ss_pred ---cchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 254 ---KSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 254 ---~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
..|.+++++||..||.+|+|+.++|.| +||..
T Consensus 377 ~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H-pFF~~ 411 (415)
T KOG0671|consen 377 LEHVQLFDLLRRMLEFDPARRITLREALSH-PFFAR 411 (415)
T ss_pred HHHhHHHHHHHHHHccCccccccHHHHhcC-HHhhc
Confidence 137888999999999999999999998 67753
No 363
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.95 E-value=2.1e-26 Score=243.54 Aligned_cols=238 Identities=15% Similarity=0.178 Sum_probs=168.7
Q ss_pred CCCCCC-CceEEEEeEECCCC--CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDG--SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g--~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
+||.|+ | +||+|....++ ..+++|.+..... ....+.+.+|+..++.++||||+++++.+... ..+
T Consensus 2 ~lg~G~~g--~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~--------~~~ 70 (268)
T cd05086 2 EIGNGWFG--KVLLSEIYTDTGVARVVVKELKANAS-SKEQNEFLQQGDPYRILQHPNILQCLGQCVEA--------IPY 70 (268)
T ss_pred cCCCCcCc--eEEEEEEEcCCCcceEEEEEecCCCC-hHHHHHHHHHHHHHhccCCcchhheEEEecCC--------Ccc
Confidence 578888 8 89999754333 3466777654322 23456788999999999999999999998753 378
Q ss_pred EEEecCC--cchHHHHHHhCC-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 103 YIVTEPV--MPLSEKIKELGL-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 103 yIVtE~v--~~L~~~L~~~~~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
|+||||+ ++|.+++.+... ........+..++.||+.||.|||+ .+++||||||+||+++.+|.+||+|||++...
T Consensus 71 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~ 149 (268)
T cd05086 71 LLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK-HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSR 149 (268)
T ss_pred EEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH-CCeeccCCccceEEEcCCccEEeccccccccc
Confidence 9999999 589999876432 1222334456679999999999996 89999999999999999999999999987543
Q ss_pred CCCCCCCCCCccccccccCCCCCChhcccccccc-ccCCCCCcchHHHHHHHHHHHhhC-CCCCChhh----hh----c-
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA-VRKSPPWSIDSWGLGCLIYELFSG-MRLSKTEE----LR----N- 248 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~-~~~~~~~~~Di~SLG~li~el~~g-~~p~~~~~----l~----~- 248 (771)
....... .......+..|+|||+....... ....++.++|+|||||++|||+++ ..|+.... +. .
T Consensus 150 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~ 225 (268)
T cd05086 150 YKEDYIE----TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQ 225 (268)
T ss_pred Ccchhhh----cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhc
Confidence 2211000 01112334589999997542211 112456789999999999999964 45553211 10 0
Q ss_pred ---------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 249 ---------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 249 ---------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...++..+..++.+|+ .+|.+||++.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~ 265 (268)
T cd05086 226 QVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRL 265 (268)
T ss_pred ccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHH
Confidence 0123445677788888 679999999998753
No 364
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=6.6e-28 Score=246.87 Aligned_cols=245 Identities=16% Similarity=0.208 Sum_probs=194.6
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
-..|+..+.+|.|+ | +|..++-|.+++.+|||++.+...-. .....-..|-+.|+..+||.+..+-..|.+.
T Consensus 167 m~dFdfLKvLGkGTFG--KVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~---- 240 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFG--KVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQ---- 240 (516)
T ss_pred cchhhHHHHhcCCccc--eEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccC----
Confidence 35688889999999 9 99999999999999999998753221 2233345688999999999998888888863
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.++|+||||+ +.|..+|.+.....+.+. .++-..|+.||.|||+ .+||.||||.+|.+++.+|.+||.||
T Consensus 241 ----drlCFVMeyanGGeLf~HLsrer~FsE~Rt---RFYGaEIvsAL~YLHs-~~ivYRDlKLENLlLDkDGHIKitDF 312 (516)
T KOG0690|consen 241 ----DRLCFVMEYANGGELFFHLSRERVFSEDRT---RFYGAEIVSALGYLHS-RNIVYRDLKLENLLLDKDGHIKITDF 312 (516)
T ss_pred ----ceEEEEEEEccCceEeeehhhhhcccchhh---hhhhHHHHHHhhhhhh-CCeeeeechhhhheeccCCceEeeec
Confidence 4999999999 568888877554333333 3337799999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-------- 245 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-------- 245 (771)
|+|..-...+. ....+++++.|.|||++.. ..|+.++|.|++|++||||++|+.||...+
T Consensus 313 GLCKE~I~~g~------t~kTFCGTPEYLAPEVleD------nDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLI 380 (516)
T KOG0690|consen 313 GLCKEEIKYGD------TTKTFCGTPEYLAPEVLED------NDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELI 380 (516)
T ss_pred ccchhcccccc------eeccccCChhhcCchhhcc------ccccceeehhhhhHHHHHHHhccCcccccchhHHHHHH
Confidence 99986443211 1334667779999999987 478899999999999999999998875433
Q ss_pred ----hhccCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcchhh
Q 004157 246 ----LRNTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQNKLV 289 (771)
Q Consensus 246 ----l~~~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n~lv 289 (771)
++....+.++...++..||..+|++|.. +.++.+| .||.+.-.
T Consensus 381 l~ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h-~FF~~v~W 432 (516)
T KOG0690|consen 381 LMEDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH-RFFASVDW 432 (516)
T ss_pred HhhhccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh-hhhccCCH
Confidence 3344667778888899999999999984 5566666 77765433
No 365
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1e-27 Score=278.08 Aligned_cols=256 Identities=16% Similarity=0.153 Sum_probs=205.2
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d 94 (771)
....|+|.+.||.|. | .|+.++++.+++-||+|++++-..- ......++.|-.+|---..+-|++++..|.++
T Consensus 73 ~~~DfeilKvIGrGaFG--EV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~--- 147 (1317)
T KOG0612|consen 73 KAEDFEILKVIGRGAFG--EVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE--- 147 (1317)
T ss_pred CHHhhHHHHHhcccccc--eeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc---
Confidence 456799999999999 9 9999999999999999999862111 12234577787888888889999999999875
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
.++|+||||+ |+|-.+|.+.. ...+.+..+++..|+.||.-||+ .|+|||||||+||+++..|.+||+|
T Consensus 148 -----~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~-mgyVHRDiKPDNvLld~~GHikLAD 218 (1317)
T KOG0612|consen 148 -----RYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHS-MGYVHRDIKPDNVLLDKSGHIKLAD 218 (1317)
T ss_pred -----cceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHh-ccceeccCCcceeEecccCcEeecc
Confidence 4999999999 67988888875 23466778889999999999996 9999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc---
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT--- 249 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~--- 249 (771)
||-|-.+..++ .+.....++++.|.+||++..--. -+..|+..+|.||+|+++|||+.|..||..+.+-.+
T Consensus 219 FGsClkm~~dG-----~V~s~~aVGTPDYISPEvLqs~~~-~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~K 292 (1317)
T KOG0612|consen 219 FGSCLKMDADG-----TVRSSVAVGTPDYISPEVLQSQGD-GKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGK 292 (1317)
T ss_pred chhHHhcCCCC-----cEEeccccCCCCccCHHHHHhhcC-CccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHH
Confidence 99998887533 344455677789999999864211 135688999999999999999999999976654211
Q ss_pred -------------CCCCcchHHHHHHHhccCCCCCCC---hHHHhhCCCCCcchhhhhhhh
Q 004157 250 -------------ASIPKSLLPDYQRLLSSMPSRRLN---SSKLIENSEYFQNKLVDTIHF 294 (771)
Q Consensus 250 -------------~~IP~~l~~~i~~lL~~~P~~Rps---~~~lL~~~~fF~n~lv~~~~~ 294 (771)
..|+....++|+++|. +|..|.. +++|-.| +||.+.-+..++.
T Consensus 293 Im~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H-pFF~g~~W~~iR~ 351 (1317)
T KOG0612|consen 293 IMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH-PFFEGIDWDNIRE 351 (1317)
T ss_pred HhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC-ccccCCChhhhhh
Confidence 2356778888888876 5677777 9998887 7887765555443
No 366
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.94 E-value=1.9e-26 Score=274.28 Aligned_cols=145 Identities=14% Similarity=0.239 Sum_probs=124.0
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
..|++.++||.|. | +||+|.++.+++.|+||++..... .......+.+|+..++.++||||+++++++...
T Consensus 4 ~~y~i~~~LG~G~fg--~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~----- 76 (669)
T cd05610 4 EEFVIVKPISRGAFG--KVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSA----- 76 (669)
T ss_pred CCEEEEEEEecCCCe--EEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEEC-----
Confidence 3699999999998 8 999999999999999999976432 234456788999999999999999999998763
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
.++||||||+ ++|.+++...... ....++.++.||+.||.|||. ++|+||||||+|||++.+|.+||+|||
T Consensus 77 ---~~~~lVmEy~~g~~L~~li~~~~~l---~~~~~~~i~~qil~aL~yLH~-~gIiHrDLKP~NILl~~~g~vkL~DFG 149 (669)
T cd05610 77 ---NNVYLVMEYLIGGDVKSLLHIYGYF---DEEMAVKYISEVALALDYLHR-HGIIHRDLKPDNMLISNEGHIKLTDFG 149 (669)
T ss_pred ---CEEEEEEeCCCCCCHHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHh-CCEEeCCccHHHEEEcCCCCEEEEeCC
Confidence 4899999999 4799888765432 234456679999999999996 899999999999999999999999999
Q ss_pred ccc
Q 004157 175 VLS 177 (771)
Q Consensus 175 la~ 177 (771)
+++
T Consensus 150 ls~ 152 (669)
T cd05610 150 LSK 152 (669)
T ss_pred CCc
Confidence 875
No 367
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=4.3e-27 Score=269.13 Aligned_cols=234 Identities=17% Similarity=0.218 Sum_probs=188.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCC-----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDD-----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~-----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
.-++.+++|+|. | +||+|..-.- ..-|+||.++.. ..+.....|++|+..|..|+|||||++++++...
T Consensus 487 ~i~~~~eLGegaFG--kVf~a~~~~l~p~~~~~lVAVK~LKd~-a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~-- 561 (774)
T KOG1026|consen 487 DIVFKEELGEGAFG--KVFLAEAYGLLPGQDEQLVAVKALKDK-AENQARQDFRREAELLAELQHPNIVRLLGVCREG-- 561 (774)
T ss_pred heeehhhhcCchhh--hhhhhhccCCCCCccceehhHhhhccc-ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC--
Confidence 455667899999 9 9999986532 357999998754 3444677899999999999999999999999863
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCC-------CC----CcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLE-------GS----QRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSV 160 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~-------~~----~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI 160 (771)
+-+|+|+||| ++|.++|+..... .. .....+..+..||+.|+.||-+ ..+|||||-..|+
T Consensus 562 ------~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~-~~FVHRDLATRNC 634 (774)
T KOG1026|consen 562 ------DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS-HHFVHRDLATRNC 634 (774)
T ss_pred ------CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-Ccccccchhhhhc
Confidence 4789999999 8999999876421 11 2233456779999999999997 8999999999999
Q ss_pred EEcCCCcEEEEccCcccccCCCCCCCCCCcccc--ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhC-
Q 004157 161 VVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQY--AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG- 237 (771)
Q Consensus 161 ~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~--~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g- 237 (771)
+|+++-.+||+|||+++..-+.+ |++. ....+.+|||||.+.. ..++.++||||+|+++||+|+-
T Consensus 635 LVge~l~VKIsDfGLsRdiYssD------YYk~~~~t~lPIRWMppEsIly------~kFTteSDVWs~GVvLWEIFsyG 702 (774)
T KOG1026|consen 635 LVGENLVVKISDFGLSRDIYSSD------YYKVRGNTLLPIRWMPPESILY------GKFTTESDVWSFGVVLWEIFSYG 702 (774)
T ss_pred eeccceEEEecccccchhhhhhh------hhcccCCceeeeecCCHHHhhc------Ccccchhhhhhhhhhhhhhhccc
Confidence 99999999999999999876532 2211 2344569999999986 3788899999999999999984
Q ss_pred CCCCCh---h----------hhhccCCCCcchHHHHHHHhccCCCCCCChHHH
Q 004157 238 MRLSKT---E----------ELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKL 277 (771)
Q Consensus 238 ~~p~~~---~----------~l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~l 277 (771)
..|+.. + -+....+.|.++..++..|++.+|++||++.++
T Consensus 703 ~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI 755 (774)
T KOG1026|consen 703 KQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEI 755 (774)
T ss_pred cCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 444321 1 123346789999999999999999999999987
No 368
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=2.3e-27 Score=243.83 Aligned_cols=244 Identities=20% Similarity=0.282 Sum_probs=190.9
Q ss_pred CCCceecCCCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 18 DLPYNIGDPYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..+|.-...++.|.. .|-.+-+.-.+++|+||+......+....+.+.+|++.++.+.|+||++.+.+|.-... ..
T Consensus 16 ~~Ry~nL~p~~~g~~--~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~--l~ 91 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ--IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKT--LE 91 (369)
T ss_pred eeeeeeecccCCCCc--eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCcccc--HH
Confidence 356777778888765 57777777789999999998776555667788999999999999999999999852110 01
Q ss_pred cccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
.-...|+|||++ .+|...+... ...+.++++++|++.|+++||+ .+|+||||||+||+|+.++..|+.|||++
T Consensus 92 ~~~e~y~v~e~m~~nl~~vi~~e-----lDH~tis~i~yq~~~~ik~lhs-~~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 92 EFQEVYLVMELMDANLCQVILME-----LDHETISYILYQMLCGIKHLHS-AGIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred HHHhHHHHHHhhhhHHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHh-cceeecccCcccceecchhheeeccchhh
Confidence 134689999999 6888887732 1234577889999999999997 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL---------- 246 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l---------- 246 (771)
+..... +....+++...|.|||++.+ ..+...+||||+||++.||++|.-+|.+.+.
T Consensus 166 r~e~~~-------~~mtpyVvtRyyrapevil~------~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~ 232 (369)
T KOG0665|consen 166 RTEDTD-------FMMTPYVVTRYYRAPEVILG------MGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQ 232 (369)
T ss_pred cccCcc-------cccCchhheeeccCchheec------cCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHH
Confidence 865442 23445577778999999987 4578899999999999999999877653210
Q ss_pred -h-------------------cc---------CCCC---------------cchHHHHHHHhccCCCCCCChHHHhhCCC
Q 004157 247 -R-------------------NT---------ASIP---------------KSLLPDYQRLLSSMPSRRLNSSKLIENSE 282 (771)
Q Consensus 247 -~-------------------~~---------~~IP---------------~~l~~~i~~lL~~~P~~Rps~~~lL~~~~ 282 (771)
. +. ..+| ....+++.+||-.+|++|.++.++|+| +
T Consensus 233 lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H-P 311 (369)
T KOG0665|consen 233 LGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH-P 311 (369)
T ss_pred hcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC-C
Confidence 0 00 0111 125677889999999999999999999 5
Q ss_pred CCc
Q 004157 283 YFQ 285 (771)
Q Consensus 283 fF~ 285 (771)
||+
T Consensus 312 Y~~ 314 (369)
T KOG0665|consen 312 YIK 314 (369)
T ss_pred eee
Confidence 664
No 369
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.94 E-value=1.5e-26 Score=269.09 Aligned_cols=274 Identities=11% Similarity=0.108 Sum_probs=176.3
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCC----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDD----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
...|++++.||.|+ | +||+|++..+ +..|+||++......+ ...++ .++...+.++..++..+....
T Consensus 131 ~~~y~l~~~LG~G~FG--~VYka~~~~~~~~~~~~vAvK~~~~~~~~e----~~~~e--~l~~~~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 131 KDDFVLGKKLGEGAFG--VVYKASLVNKQSKKEGKYVLKKATEYGAVE----IWMNE--RVRRACPNSCADFVYGFLEPV 202 (566)
T ss_pred cCCeEEeEEEeeCCCe--EEEEEEEcCCccccCcEEEEEEecccchhH----HHHHH--HHHhhchhhHHHHHHhhhccc
Confidence 34799999999998 8 9999999988 9999999976432111 11111 222223333333333322111
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCC-----------------CCcHHHHHHHHHHHHHHHHHHHcCCCceec
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEG-----------------SQRDEYYAWGLNQIAKAVSFLNNDCKLVHG 153 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~-----------------~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~ 153 (771)
. ......+|||+||+ ++|.+++....... ......+..++.||+.||.|||+ .+|+||
T Consensus 203 ~--~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~-~gIiHR 279 (566)
T PLN03225 203 S--SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS-TGIVHR 279 (566)
T ss_pred c--cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH-CCEEeC
Confidence 0 00134799999999 46888887543210 01123356679999999999996 899999
Q ss_pred CCCCCCEEEcC-CCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccc----------------cC
Q 004157 154 NVCLSSVVVTQ-TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAV----------------RK 216 (771)
Q Consensus 154 dIkp~NI~v~~-~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~----------------~~ 216 (771)
||||+||+++. ++.+||+|||++..+.... .+....+.....|+|||.+....... ..
T Consensus 280 DLKP~NILl~~~~~~~KL~DFGlA~~l~~~~-----~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~ 354 (566)
T PLN03225 280 DVKPQNIIFSEGSGSFKIIDLGAAADLRVGI-----NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQL 354 (566)
T ss_pred cCCHHHEEEeCCCCcEEEEeCCCcccccccc-----ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccc
Confidence 99999999986 6899999999997654321 11122334556899999654221100 01
Q ss_pred CCCCcchHHHHHHHHHHHhhCCCCCChhhh------hc----------c--CC--------------CCcchHHHHHHHh
Q 004157 217 SPPWSIDSWGLGCLIYELFSGMRLSKTEEL------RN----------T--AS--------------IPKSLLPDYQRLL 264 (771)
Q Consensus 217 ~~~~~~Di~SLG~li~el~~g~~p~~~~~l------~~----------~--~~--------------IP~~l~~~i~~lL 264 (771)
.++.++|||||||++|||+++..++..... .. . .. ......+++.+||
T Consensus 355 ~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 355 NLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred cCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHc
Confidence 234567999999999999987544332110 00 0 00 1112347999999
Q ss_pred ccCCCCCCChHHHhhCCCCCcchhhhhhhhhhhhccCChhhHHh
Q 004157 265 SSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNLKDSVEKDT 308 (771)
Q Consensus 265 ~~~P~~Rps~~~lL~~~~fF~n~lv~~~~~L~~l~~k~~~eK~~ 308 (771)
+.||.+||++.++|+| +||+......+..++.+......+..+
T Consensus 435 ~~dP~kR~ta~e~L~H-pff~~~~~~~~~~~~~~~~~~~~~~~~ 477 (566)
T PLN03225 435 RFKGRQRISAKAALAH-PYFDREGLLGLSVMQNLRLQLFRATQQ 477 (566)
T ss_pred cCCcccCCCHHHHhCC-cCcCCCCccccccccccccccchhhHH
Confidence 9999999999999998 777765544455555554444443333
No 370
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.4e-26 Score=252.86 Aligned_cols=233 Identities=20% Similarity=0.262 Sum_probs=171.6
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|.-...||.|+ | +||+|.-. +|..||||.+....... ...+.+|+.+|.+++|||++++++++.+.+
T Consensus 77 Fs~~~~ig~Ggfg--~VYkG~l~-~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~------- 144 (361)
T KOG1187|consen 77 FSESNLIGEGGFG--TVYKGVLS-DGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGG------- 144 (361)
T ss_pred CchhcceecCCCe--EEEEEEEC-CCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCC-------
Confidence 44445788887 7 99999976 55999999887644331 334999999999999999999999998642
Q ss_pred cEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC--ceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK--LVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 100 ~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~--ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
...+||+||+ ++|.++|...... ...-..-..++.++++||.|||+.+. |||||||++|||++++.+.||+|||+
T Consensus 145 ~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGL 223 (361)
T KOG1187|consen 145 EHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGL 223 (361)
T ss_pred ceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccC
Confidence 1589999999 6899999775421 11122223448899999999998774 99999999999999999999999999
Q ss_pred ccccCC-CCCCCCCCcccccc-ccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh------h-
Q 004157 176 LSEFDG-NNEAANGPMLQYAW-LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE------L- 246 (771)
Q Consensus 176 a~~~~~-~~~~~~~~~~~~~~-~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~------l- 246 (771)
+..... ... . ... .++..|++||+...+ ..+.++|+||||+++.|+++|+.+.+... +
T Consensus 224 a~~~~~~~~~-----~--~~~~~gt~gY~~PEy~~~g------~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~ 290 (361)
T KOG1187|consen 224 AKLGPEGDTS-----V--STTVMGTFGYLAPEYASTG------KLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLV 290 (361)
T ss_pred cccCCccccc-----e--eeecCCCCccCChhhhccC------CcCcccccccchHHHHHHHhCCcccCCCCCcccccHH
Confidence 954432 110 0 011 334589999998763 56679999999999999999986543210 0
Q ss_pred ------------hc-----c--CCCC--cc---hHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 ------------RN-----T--ASIP--KS---LLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 ------------~~-----~--~~IP--~~---l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.. + ...+ +. +..+..+|++.+|..||+..++++
T Consensus 291 ~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 291 EWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred HHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 00 0 1223 12 233346899999999999888654
No 371
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.94 E-value=6.3e-27 Score=260.18 Aligned_cols=233 Identities=19% Similarity=0.222 Sum_probs=183.3
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~ 96 (771)
-.|++...+|.|+ + .+..+.++.+++..++|++.+...+ ..+|+.++... .||||+++++.+++
T Consensus 322 ~~y~~~~~~~~gs~s--~~~~~~~~~t~~~~~vkii~~~~~~------~~~e~~~~~~~~~h~niv~~~~v~~~------ 387 (612)
T KOG0603|consen 322 ESYEFREELGEGSFS--AVKYCESSPTDQEPAVKIISKRADD------NQDEIPISLLVRDHPNIVKSHDVYED------ 387 (612)
T ss_pred hhhccccccCCCCcc--ceeeeeccccccchhheeccccccc------cccccchhhhhcCCCcceeecceecC------
Confidence 3589999999987 7 8899999999999999999876222 23466555554 59999999999986
Q ss_pred CcccEEEEEecCC-c-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE-cCCCcEEEEcc
Q 004157 97 STKITIYIVTEPV-M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV-TQTLDWKLHAF 173 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v-~~~G~~KL~dF 173 (771)
+.++|+|||.+ + -|.+.+....... . ....++.||+.|+.|||. .|+|||||||+||++ +..|.++|+||
T Consensus 388 --~~~~~~v~e~l~g~ell~ri~~~~~~~---~-e~~~w~~~lv~Av~~LH~-~gvvhRDLkp~NIL~~~~~g~lrltyF 460 (612)
T KOG0603|consen 388 --GKEIYLVMELLDGGELLRRIRSKPEFC---S-EASQWAAELVSAVDYLHE-QGVVHRDLKPGNILLDGSAGHLRLTYF 460 (612)
T ss_pred --CceeeeeehhccccHHHHHHHhcchhH---H-HHHHHHHHHHHHHHHHHh-cCeeecCCChhheeecCCCCcEEEEEe
Confidence 45999999999 3 3555554443322 1 133349999999999997 999999999999999 69999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh----hhhcc
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----ELRNT 249 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~----~l~~~ 249 (771)
|+++..... ......+..|.|||+... ..++.++|+||||+++|+|++|..|+... ++...
T Consensus 461 G~a~~~~~~---------~~tp~~t~~y~APEvl~~------~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~ 525 (612)
T KOG0603|consen 461 GFWSELERS---------CDTPALTLQYVAPEVLAI------QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTR 525 (612)
T ss_pred chhhhCchh---------hcccchhhcccChhhhcc------CCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHh
Confidence 999887652 011133458999999884 58899999999999999999999988542 22211
Q ss_pred -------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcch
Q 004157 250 -------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNK 287 (771)
Q Consensus 250 -------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~ 287 (771)
..|+....+++++||+.+|.+|+++.+++.|.|+.+++
T Consensus 526 i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~~~ 570 (612)
T KOG0603|consen 526 IQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLSHP 570 (612)
T ss_pred hcCCccccccCHHHHHHHHHhccCChhhCcChhhhccCcchhcCC
Confidence 45778899999999999999999999999995553443
No 372
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.94 E-value=1.7e-26 Score=252.94 Aligned_cols=231 Identities=16% Similarity=0.222 Sum_probs=185.0
Q ss_pred ecCCCCCCC-CceEEEEeEECCC----CCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 23 IGDPYPSAW-GSWSHFQGTSKDD----GSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 23 i~e~ig~G~-g~wtVy~g~~k~~----g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+++.||.|. | .||+|+...- +-.||||........+ ..+.+..|.-+++.++||||+++++++++.
T Consensus 393 l~r~iG~GqFG--dVy~gvYt~~~kge~iaVAvKtCK~d~t~d-~tekflqEa~iMrnfdHphIikLIGv~~e~------ 463 (974)
T KOG4257|consen 393 LKRLIGEGQFG--DVYKGVYTDPEKGERIAVAVKTCKTDCTPD-DTEKFLQEASIMRNFDHPHIIKLIGVCVEQ------ 463 (974)
T ss_pred HHHhhcCCccc--ceeeeEecccccCcceeeeeehhccCCChh-hHHHHHHHHHHHHhCCCcchhheeeeeecc------
Confidence 345678888 8 9999987533 3468999987644433 477889999999999999999999999864
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
-+|||||.+ |.|..+|+.+... .....+..+.+||+.||.|||+ .++|||||-..||+|....-+||+|||+
T Consensus 464 ---P~WivmEL~~~GELr~yLq~nk~s--L~l~tL~ly~~Qi~talaYLeS-krfVHRDIAaRNiLVsSp~CVKLaDFGL 537 (974)
T KOG4257|consen 464 ---PMWIVMELAPLGELREYLQQNKDS--LPLRTLTLYCYQICTALAYLES-KRFVHRDIAARNILVSSPQCVKLADFGL 537 (974)
T ss_pred ---ceeEEEecccchhHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHh-hchhhhhhhhhheeecCcceeeecccch
Confidence 589999999 7899999987532 2234456679999999999997 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCCh-----------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKT----------- 243 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~----------- 243 (771)
++.+.+... +.......+..||+||.+.. ..++.++|+|.||+.|||++. |..||..
T Consensus 538 SR~~ed~~y-----YkaS~~kLPIKWmaPESINf------RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iE 606 (974)
T KOG4257|consen 538 SRYLEDDAY-----YKASRGKLPIKWMAPESINF------RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIE 606 (974)
T ss_pred hhhccccch-----hhccccccceeecCccccch------hcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEec
Confidence 998876421 11222233458999999876 467889999999999999987 5556632
Q ss_pred --hhhhccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 244 --EELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 244 --~~l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
+.+....++|+.|..++.+|+..+|.+||++.++..
T Consensus 607 nGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 607 NGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred CCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 223344678899999999999999999999988754
No 373
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.7e-26 Score=271.18 Aligned_cols=241 Identities=16% Similarity=0.213 Sum_probs=192.0
Q ss_pred CCCCCc---eecCCCCCCC-CceEEEEeEECCCCCc-----EEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEee
Q 004157 16 VKDLPY---NIGDPYPSAW-GSWSHFQGTSKDDGSP-----VSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLH 86 (771)
Q Consensus 16 ~~~~~Y---~i~e~ig~G~-g~wtVy~g~~k~~g~~-----VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d 86 (771)
++.+++ ++++.||.|. | .||.|+-..-... |+||.+.+. .+.+....+.+|..+++.+.|||||++++
T Consensus 686 lp~v~~~~v~l~~~lG~G~FG--~VY~g~~~~~~~~~~~~~vaiK~l~~~-~~~~~~~~Fl~Ea~~m~~f~HpNiv~liG 762 (1025)
T KOG1095|consen 686 LPEVPRKNVTLLRVLGKGAFG--EVYEGTYSDVPGSVSPIQVAVKSLKRL-SSEQEVSDFLKEALLMSKFDHPNIVSLIG 762 (1025)
T ss_pred cccCChhheEeeeeecccccc--ceEEEEEecCCCCccceEEEEEecccc-CCHHHHHHHHHHHHHHhcCCCcceeeEEE
Confidence 444554 5667899999 9 9999998755443 889988753 44456778899999999999999999999
Q ss_pred eEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCC----CCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCE
Q 004157 87 STEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEG----SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSV 160 (771)
Q Consensus 87 ~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~----~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI 160 (771)
+.-.. ...+|++||+ ++|..+|++..... ......+..+..+|++|++||++ .++|||||-..|+
T Consensus 763 v~l~~--------~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~-~~fvHRDLAaRNC 833 (1025)
T KOG1095|consen 763 VCLDS--------GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES-KHFVHRDLAARNC 833 (1025)
T ss_pred eecCC--------CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh-CCCcCcchhhhhe
Confidence 99863 2679999999 68999999863211 12233355668999999999996 8999999999999
Q ss_pred EEcCCCcEEEEccCcccccCCCCCCCCCCccccc--cccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-C
Q 004157 161 VVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYA--WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-G 237 (771)
Q Consensus 161 ~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~--~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g 237 (771)
++++...+|++|||+++.+... .+++.. ...+..|||||.+.. ..++.++|+||||+|+||+|+ |
T Consensus 834 LL~~~r~VKIaDFGlArDiy~~------~yyr~~~~a~lPvkWm~PEsl~d------~iFtskSDvWsFGVllWEifslG 901 (1025)
T KOG1095|consen 834 LLDERRVVKIADFGLARDIYDK------DYYRKHGEAMLPVKWMPPESLKD------GIFTSKSDVWSFGVLLWEIFSLG 901 (1025)
T ss_pred eecccCcEEEcccchhHhhhhc------hheeccCccccceecCCHHHHhh------cccccccchhhhHHHHHHHHhCC
Confidence 9999999999999999955432 122211 244569999999986 477889999999999999999 4
Q ss_pred CCCCChh-------------hhhccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 238 MRLSKTE-------------ELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 238 ~~p~~~~-------------~l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..|+... .+.....+|..+.+++.+|++.+|+.||++..+++.
T Consensus 902 ~~PY~~~~n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q 957 (1025)
T KOG1095|consen 902 ATPYPSRSNFEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQ 957 (1025)
T ss_pred CCCCCCcchHHHHHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhh
Confidence 4666432 234457789999999999999999999999999874
No 374
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.94 E-value=3.1e-26 Score=260.68 Aligned_cols=252 Identities=17% Similarity=0.253 Sum_probs=202.6
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEeccc
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~ 93 (771)
.+.--|+|.+.+|.|. | .||+++.+.+++.++||+.+.....+ +.+.-|..+|+.+. |||+..++.+|.....
T Consensus 16 dp~d~~ei~evig~Gtyg--kv~k~k~~~~~~~aa~kI~~~~~d~d---eEiE~eynil~~~~~hpnv~~fyg~~~k~~~ 90 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYG--KVYKGRHVKTGQLAAIKIMDPTEDEE---EEIELEYNMLKKYSHHPNVATFYGAFIKKDP 90 (953)
T ss_pred CCCCccEEEEEEeeccce--eEEEEeeeecCceeeeEeecCCcccc---HHHHHHHHHHHhccCCCCcceEEEEEEEecC
Confidence 3556799999999999 8 99999999999999999998754443 34566888999885 9999999999875443
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
.+ ++.+||||||| ++..+++++.. .....+++|+++++.++.||.+||+ .+++|||||-.||+++.+|.+||+
T Consensus 91 ~~---~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~-nkviHRDikG~NiLLT~e~~VKLv 165 (953)
T KOG0587|consen 91 GN---GDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHN-NKVIHRDIKGQNVLLTENAEVKLV 165 (953)
T ss_pred CC---CCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhh-cceeeecccCceEEEeccCcEEEe
Confidence 22 56999999999 57888887765 4555677899999999999999997 899999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCC-hhhhhccC
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK-TEELRNTA 250 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~-~~~l~~~~ 250 (771)
|||++.+++..- -.+..+++++.|||||++... ......|...+|+||||++..||-.|.+|+- -...+.+.
T Consensus 166 DFGvSaQldsT~------grRnT~iGtP~WMAPEViac~-e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF 238 (953)
T KOG0587|consen 166 DFGVSAQLDSTV------GRRNTFIGTPYWMAPEVIACD-ESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALF 238 (953)
T ss_pred eeeeeeeeeccc------ccccCcCCCcccccceeeecc-cCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhc
Confidence 999998887632 223445666789999999764 2233457789999999999999999987753 33344443
Q ss_pred CCC--------------cchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 251 SIP--------------KSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 251 ~IP--------------~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
.|| +.+.++|..||..+-.+||+..++|+| +|..
T Consensus 239 ~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h-pFi~ 286 (953)
T KOG0587|consen 239 LIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH-PFIT 286 (953)
T ss_pred cCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC-Cccc
Confidence 333 246677899999999999999999999 4543
No 375
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=8.2e-27 Score=259.08 Aligned_cols=233 Identities=16% Similarity=0.232 Sum_probs=182.5
Q ss_pred eecCCCCCCC-CceEEEEeEECCCCC---c-EEEEEEeCCC-CchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 22 NIGDPYPSAW-GSWSHFQGTSKDDGS---P-VSIFSISGTN-AQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 22 ~i~e~ig~G~-g~wtVy~g~~k~~g~---~-VaIK~~~~~~-~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
++++++|+|. | .||.|+.+..+. . ||||....+. ........+.+|.++++.|+||||+++|++...+
T Consensus 160 ~l~kkLGeGaFG--eV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~---- 233 (474)
T KOG0194|consen 160 ELGKKLGEGAFG--EVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLE---- 233 (474)
T ss_pred cccceeeccccc--EEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCC----
Confidence 4457899999 9 999999886533 3 8999988632 4456677889999999999999999999988764
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.-+|||||+| ++|.++|+..+.. .......+.+++.+.||.|||. .+++||||-..|++++.++.+||+||
T Consensus 234 ----~Pl~ivmEl~~gGsL~~~L~k~~~~--v~~~ek~~~~~~AA~Gl~YLh~-k~~IHRDIAARNcL~~~~~~vKISDF 306 (474)
T KOG0194|consen 234 ----EPLMLVMELCNGGSLDDYLKKNKKS--LPTLEKLRFCYDAARGLEYLHS-KNCIHRDIAARNCLYSKKGVVKISDF 306 (474)
T ss_pred ----CccEEEEEecCCCcHHHHHHhCCCC--CCHHHHHHHHHHHHhHHHHHHH-CCCcchhHhHHHheecCCCeEEeCcc
Confidence 3689999999 6899999987631 1222234559999999999996 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhhh-----
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEELR----- 247 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l~----- 247 (771)
|+++.-... .+....-..|..|+|||.+..+ .++.++|+|||||++||+|+ |..|+......
T Consensus 307 GLs~~~~~~------~~~~~~~klPirWLAPEtl~~~------~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~k 374 (474)
T KOG0194|consen 307 GLSRAGSQY------VMKKFLKKLPIRWLAPETLNTG------IFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAK 374 (474)
T ss_pred ccccCCcce------eeccccccCcceecChhhhccC------ccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHH
Confidence 997654311 1111111356799999999873 67889999999999999999 56666433211
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
....-|..+...+.+|+..+|+.|++..++.+
T Consensus 375 I~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 375 IVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred HHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 11345667888889999999999999988765
No 376
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.94 E-value=5.7e-27 Score=262.33 Aligned_cols=207 Identities=17% Similarity=0.235 Sum_probs=163.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|...+.+|.|+ | .||+|+++.+|+.||||.|.... .-...+...+|+++||+|+|||||+++++-++... +
T Consensus 12 ~y~W~~~e~LG~Ga~g--~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~--~ 86 (732)
T KOG4250|consen 12 NYLWEMDERLGKGAFG--NVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFL--G 86 (732)
T ss_pred CcceeehhhhcCCccc--eeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCcccc--C
Confidence 34577889999998 8 99999999999999999998643 22346678899999999999999999998765431 1
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC--CCc--EEE
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ--TLD--WKL 170 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~--~G~--~KL 170 (771)
.....-.+||||| ++|...|++-.......+..+...+..++.||.|||+ +||+||||||.||++-. +|. .||
T Consensus 87 ~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE-n~IvHRDlKP~NIvl~~Gedgq~IyKL 165 (732)
T KOG4250|consen 87 LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE-NGIVHRDLKPGNIVLQIGEDGQSIYKL 165 (732)
T ss_pred cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCcEEEeecCCCceEEee
Confidence 1123568999999 6899999764432233344456669999999999995 99999999999998843 333 899
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCC
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~ 242 (771)
+|||+++..++... -....++..|.+||+.... +.++.-+|.|||||++|++.+|..||.
T Consensus 166 tDfG~Arel~d~s~-------~~S~vGT~~YLhPel~E~q-----~~y~~tVDLWS~GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 166 TDFGAARELDDNSL-------FTSLVGTEEYLHPELYERQ-----KKYTATVDLWSFGVTLYECATGELPFI 225 (732)
T ss_pred ecccccccCCCCCe-------eeeecCchhhcChHHHhhc-----cCcCceeehhhhhhHHHHHhccCCCCC
Confidence 99999999877421 1123445599999998741 467889999999999999999998773
No 377
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.94 E-value=6.4e-26 Score=232.88 Aligned_cols=221 Identities=20% Similarity=0.322 Sum_probs=178.4
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEEEecCC--cch
Q 004157 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPL 112 (771)
Q Consensus 35 tVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L 112 (771)
.||+|+.+.+|+.|++|++........ .+.+++|++.+++++|+||+++++.+... ...|+++|++ ++|
T Consensus 4 ~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--------~~~~l~~e~~~~~~L 74 (244)
T smart00220 4 KVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDE--------DKLYLVMEYCDGGDL 74 (244)
T ss_pred EEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeC--------CEEEEEEeCCCCCCH
Confidence 899999998999999999986543322 57889999999999999999999999863 3789999999 379
Q ss_pred HHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccc
Q 004157 113 SEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQ 192 (771)
Q Consensus 113 ~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~ 192 (771)
..++..... .....+..++.+++.+|.|||+ .+++|+||+|.||+++.+|.++|+|||++........ .
T Consensus 75 ~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lh~-~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~-------~ 143 (244)
T smart00220 75 FDLLKKRGR---LSEDEARFYARQILSALEYLHS-NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGL-------L 143 (244)
T ss_pred HHHHHhccC---CCHHHHHHHHHHHHHHHHHHHH-cCeecCCcCHHHeEECCCCcEEEccccceeeeccccc-------c
Confidence 988876542 2344566679999999999996 8999999999999999999999999999987654210 1
Q ss_pred cccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh-hhhh-------c-c------C-CCCcch
Q 004157 193 YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT-EELR-------N-T------A-SIPKSL 256 (771)
Q Consensus 193 ~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~-~~l~-------~-~------~-~IP~~l 256 (771)
........|++||...+ ...+.++|+|+||+++|++++|..++.. .... . . . .++..+
T Consensus 144 ~~~~~~~~~~~pE~~~~------~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (244)
T smart00220 144 TTFVGTPEYMAPEVLLG------KGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEA 217 (244)
T ss_pred ccccCCcCCCCHHHHcc------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHH
Confidence 11223347999999874 3456699999999999999999888754 2111 0 0 1 177889
Q ss_pred HHHHHHHhccCCCCCCChHHHhhCC
Q 004157 257 LPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 257 ~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
.+++.+|+..+|.+||++.++++++
T Consensus 218 ~~~i~~~l~~~p~~Rp~~~~~~~~~ 242 (244)
T smart00220 218 KDLIRKLLVKDPEKRLTAEEALQHP 242 (244)
T ss_pred HHHHHHHccCCchhccCHHHHhhCC
Confidence 9999999999999999999999984
No 378
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.94 E-value=7.8e-27 Score=264.43 Aligned_cols=235 Identities=19% Similarity=0.320 Sum_probs=177.7
Q ss_pred cCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCCcccE
Q 004157 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
.+.+|.|+ |. .||+|.. .|+.||||.+-. +....+.+|+..|+.-+ |||||+++..-.+ ...
T Consensus 514 ~eilG~Gs~Gt-~Vf~G~y--e~R~VAVKrll~-----e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d--------~qF 577 (903)
T KOG1027|consen 514 KEILGYGSNGT-VVFRGVY--EGREVAVKRLLE-----EFFDFAQREIQLLQESDEHPNVIRYYCSEQD--------RQF 577 (903)
T ss_pred HHHcccCCCCc-EEEEEee--CCceehHHHHhh-----HhHHHHHHHHHHHHhccCCCceEEEEeeccC--------Cce
Confidence 34567777 53 7999987 589999999763 35668999999999986 9999999976443 459
Q ss_pred EEEEecCC-cchHHHHHHh--CCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC---C--CcEEEEcc
Q 004157 102 IYIVTEPV-MPLSEKIKEL--GLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---T--LDWKLHAF 173 (771)
Q Consensus 102 iyIVtE~v-~~L~~~L~~~--~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~---~--G~~KL~dF 173 (771)
+||+.|.| -+|.++++.. .... +........+.|+++||++||. ++||||||||.||+|+. + ...+|+||
T Consensus 578 ~YIalELC~~sL~dlie~~~~d~~~-~~~i~~~~~l~q~~~GlaHLHs-l~iVHRDLkPQNILI~~~~~~~~~ra~iSDf 655 (903)
T KOG1027|consen 578 LYIALELCACSLQDLIESSGLDVEM-QSDIDPISVLSQIASGLAHLHS-LKIVHRDLKPQNILISVPSADGTLRAKISDF 655 (903)
T ss_pred EEEEehHhhhhHHHHHhccccchhh-cccccHHHHHHHHHHHHHHHHh-cccccccCCCceEEEEccCCCcceeEEeccc
Confidence 99999999 6899999874 1111 1101123349999999999997 99999999999999976 3 45899999
Q ss_pred CcccccCCCCCCCCCCccc-cccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhC-CCCCChhhhhc---
Q 004157 174 DVLSEFDGNNEAANGPMLQ-YAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG-MRLSKTEELRN--- 248 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~-~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g-~~p~~~~~l~~--- 248 (771)
|+|..+..... .+.+ .+..++..|+|||++... ....++|||||||++|++++| ..||+..-.++
T Consensus 656 glsKkl~~~~s----S~~r~s~~sGt~GW~APE~L~~~------~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NI 725 (903)
T KOG1027|consen 656 GLSKKLAGGKS----SFSRLSGGSGTSGWQAPEQLRED------RKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANI 725 (903)
T ss_pred ccccccCCCcc----hhhcccCCCCcccccCHHHHhcc------ccCcccchhhcCceEEEEecCCccCCCchHHhhhhh
Confidence 99998875322 2222 233344599999999874 345699999999999999997 57886543321
Q ss_pred ---------cCCCCc-chHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 249 ---------TASIPK-SLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 249 ---------~~~IP~-~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
+...+. ...++|.+|++.+|..||++.++|.|+-|+..
T Consensus 726 l~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 726 LTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred hcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 122221 46788999999999999999999999655543
No 379
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=7.1e-28 Score=241.57 Aligned_cols=243 Identities=18% Similarity=0.257 Sum_probs=182.7
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
...+-.+.||.|. | .||..++..+|+.|+.|++..-..+-...+.+-+|++.|.-++|.||+..+|...-...+.
T Consensus 53 ~Di~PDRPIGYGAFG--VVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~df-- 128 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFG--VVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSF-- 128 (449)
T ss_pred ccCCCCCccccccee--EEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchH--
Confidence 3455567899998 9 8999999999999999998743222233566778999999999999999999876433221
Q ss_pred cccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 98 TKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 98 ~~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
-..+|++||.+. +|...|-.-.... .+.++-.+|||++||+|||+ ++|.||||||.|.+||.+...||||||++
T Consensus 129 -FqEiYV~TELmQSDLHKIIVSPQ~Ls---~DHvKVFlYQILRGLKYLHs-A~ILHRDIKPGNLLVNSNCvLKICDFGLA 203 (449)
T KOG0664|consen 129 -FQELYVLTELMQSDLHKIIVSPQALT---PDHVKVFVYQILRGLKYLHT-ANILHRDIKPGNLLVNSNCILKICDFGLA 203 (449)
T ss_pred -HHHHHHHHHHHHhhhhheeccCCCCC---cchhhhhHHHHHhhhHHHhh-cchhhccCCCccEEeccCceEEecccccc
Confidence 235799999984 5777665433222 22344559999999999997 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh----hh-----
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE----LR----- 247 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~----l~----- 247 (771)
+..+.... ......+++..|++||++.+. ..|+.++||||.||++.|++..+.+|+... +.
T Consensus 204 Rvee~d~~-----~hMTqEVVTQYYRAPEiLMGa-----RhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdL 273 (449)
T KOG0664|consen 204 RTWDQRDR-----LNMTHEVVTQYYRAPELLMGA-----RRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDL 273 (449)
T ss_pred cccchhhh-----hhhHHHHHHHHhccHHHhhcc-----hhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHH
Confidence 87654321 111223455589999999986 688999999999999999998877764321 10
Q ss_pred -------------------------------ccCCCCc------chHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 -------------------------------NTASIPK------SLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 -------------------------------~~~~IP~------~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.++.+.. ....++++|+..+|..|.+.++.+.|
T Consensus 274 LGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 274 LGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred hCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 0011211 24556788999999999999998887
No 380
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.93 E-value=2e-26 Score=226.51 Aligned_cols=236 Identities=17% Similarity=0.255 Sum_probs=184.1
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d 94 (771)
.+.+|+|.+++|.|- + .||.|.+..+++.|.||++.. -..+.+++|+++|+.|+ ||||++++|...+..
T Consensus 36 ~~ddYeivrk~GRGKYS--EVFeg~~~~~~eK~ViKiLKP-----VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~-- 106 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYS--EVFEGINITNNEKCVIKILKP-----VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPE-- 106 (338)
T ss_pred ccchHHHHHHHcCccHh--hHhcccccCCCceEEEeeech-----HHHHHHHHHHHHHHhccCCCCeeehhhhhcCcc--
Confidence 567899999999998 7 999999999999999999874 23567899999999999 999999999998755
Q ss_pred cCCcccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-CCcEEEE
Q 004157 95 ATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLH 171 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~-~G~~KL~ 171 (771)
.....+|+|++. +...+..... .-.|.+.++|+++||.|||+ .||+|||+||.||+|+. .-..+|+
T Consensus 107 ----SktpaLiFE~v~n~Dfk~ly~tl~------d~dIryY~~elLkALdyCHS-~GImHRDVKPhNvmIdh~~rkLrlI 175 (338)
T KOG0668|consen 107 ----SKTPSLIFEYVNNTDFKQLYPTLT------DYDIRYYIYELLKALDYCHS-MGIMHRDVKPHNVMIDHELRKLRLI 175 (338)
T ss_pred ----ccCchhHhhhhccccHHHHhhhhc------hhhHHHHHHHHHHHHhHHHh-cCcccccCCcceeeechhhceeeee
Confidence 346789999994 4443333321 12277779999999999997 89999999999999995 5669999
Q ss_pred ccCcccccCCCCCCCCCCccccccc-cCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCC-Ch----hh
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWL-VGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS-KT----EE 245 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~-~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~-~~----~~ 245 (771)
|+|++..+.... .|.-. ....|.-||++..- +.+..+.|+|||||++..|+..+.|| .. ++
T Consensus 176 DWGLAEFYHp~~--------eYnVRVASRyfKGPELLVdy-----~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQ 242 (338)
T KOG0668|consen 176 DWGLAEFYHPGK--------EYNVRVASRYFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ 242 (338)
T ss_pred ecchHhhcCCCc--------eeeeeeehhhcCCchheeec-----hhccccHHHHHHHHHHHHHHhccCcccCCCCCHHH
Confidence 999998765421 23222 23356789998753 56788999999999999998877654 21 11
Q ss_pred hhc---------------------------------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 246 LRN---------------------------------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 246 l~~---------------------------------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
+-. ..-+.++..+++.++|..|...|+|+.+.+.|
T Consensus 243 LVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 243 LVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 100 01234668889999999999999999999998
Q ss_pred CCCCcc
Q 004157 281 SEYFQN 286 (771)
Q Consensus 281 ~~fF~n 286 (771)
+||..
T Consensus 323 -pyF~~ 327 (338)
T KOG0668|consen 323 -PYFAP 327 (338)
T ss_pred -chHHH
Confidence 66643
No 381
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=5.4e-26 Score=248.22 Aligned_cols=231 Identities=16% Similarity=0.252 Sum_probs=187.3
Q ss_pred ecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccE
Q 004157 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 23 i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~ 101 (771)
...++|.|. | .||.|++|.-.-.|+||.+... ...++.+..|..++|.|+|||+++++++|..+. -
T Consensus 271 MkhKLGGGQYG--eVYeGvWKkyslTvAVKtLKED---tMeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep--------P 337 (1157)
T KOG4278|consen 271 MKHKLGGGQYG--EVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP--------P 337 (1157)
T ss_pred eeeccCCCccc--ceeeeeeeccceeeehhhhhhc---chhHHHHHHHHHHHHhhcCccHHHHhhhhccCC--------C
Confidence 345788887 8 9999999999999999998632 234667888999999999999999999998764 6
Q ss_pred EEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 102 IYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 102 iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+||||||+ +.|.++|++.+..... ...+.+...||..|++||.. .++|||||-..|.+|.++..+|+.|||+++.+
T Consensus 338 FYIiTEfM~yGNLLdYLRecnr~ev~-avvLlyMAtQIsSaMeYLEk-knFIHRDLAARNCLVgEnhiVKvADFGLsRlM 415 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECNRSEVP-AVVLLYMATQISSAMEYLEK-KNFIHRDLAARNCLVGENHIVKVADFGLSRLM 415 (1157)
T ss_pred eEEEEecccCccHHHHHHHhchhhcc-hhHHHHHHHHHHHHHHHHHH-hhhhhhhhhhhhccccccceEEeeccchhhhh
Confidence 89999999 7899999998764433 23456778899999999995 89999999999999999999999999999998
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhhh------------
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEEL------------ 246 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~l------------ 246 (771)
.++.... +.+...+..|.|||-+..+ .++.++|+|+||+|+||+.+ |..|+..-++
T Consensus 416 tgDTYTA-----HAGAKFPIKWTAPEsLAyN------tFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyR 484 (1157)
T KOG4278|consen 416 TGDTYTA-----HAGAKFPIKWTAPESLAYN------TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYR 484 (1157)
T ss_pred cCCceec-----ccCccCcccccCccccccc------ccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcccc
Confidence 7642111 1122334589999988652 56679999999999999987 4456544332
Q ss_pred -hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 -RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 -~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
.....+|+.+.+++..|++.+|..||++.++-+
T Consensus 485 M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHq 518 (1157)
T KOG4278|consen 485 MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQ 518 (1157)
T ss_pred ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHH
Confidence 233578999999999999999999999988743
No 382
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=9.6e-27 Score=250.13 Aligned_cols=239 Identities=13% Similarity=0.177 Sum_probs=195.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
..++...+|.|+ | .|-.+..+.....+|+|++.+..- ...+.+.+.+|-++|..++.|.|+++|..|.++
T Consensus 421 dl~~iaTLGvGgFG--RVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~------ 492 (732)
T KOG0614|consen 421 DLKRIATLGVGGFG--RVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDS------ 492 (732)
T ss_pred hhhhhhhcccCccc--eEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccc------
Confidence 456666788888 8 787777766556688998876432 224567788999999999999999999999874
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
.++|+.||.| +.|...|+.++........ +++..+++|+.|||. .+||.|||||+|.+++.+|-.||.|||+
T Consensus 493 --kyvYmLmEaClGGElWTiLrdRg~Fdd~tar---F~~acv~EAfeYLH~-k~iIYRDLKPENllLd~~Gy~KLVDFGF 566 (732)
T KOG0614|consen 493 --KYVYMLMEACLGGELWTILRDRGSFDDYTAR---FYVACVLEAFEYLHR-KGIIYRDLKPENLLLDNRGYLKLVDFGF 566 (732)
T ss_pred --hhhhhhHHhhcCchhhhhhhhcCCcccchhh---hhHHHHHHHHHHHHh-cCceeccCChhheeeccCCceEEeehhh
Confidence 4899999999 5799999988765444433 448899999999996 8999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh--------
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR-------- 247 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~-------- 247 (771)
+..+.... .+..+++++.|.|||++.+ ++...++|.|+||+++|||++|.+||...+..
T Consensus 567 AKki~~g~-------KTwTFcGTpEYVAPEIILn------KGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILk 633 (732)
T KOG0614|consen 567 AKKIGSGR-------KTWTFCGTPEYVAPEIILN------KGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILK 633 (732)
T ss_pred HHHhccCC-------ceeeecCCcccccchhhhc------cCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHh
Confidence 99887632 2456777889999999987 57788999999999999999999999764422
Q ss_pred ------ccCCCCcchHHHHHHHhccCCCCCCC-----hHHHhhCCCCCcc
Q 004157 248 ------NTASIPKSLLPDYQRLLSSMPSRRLN-----SSKLIENSEYFQN 286 (771)
Q Consensus 248 ------~~~~IP~~l~~~i~~lL~~~P~~Rps-----~~~lL~~~~fF~n 286 (771)
-...|++...+++++|+..+|.+|.. +.++-+| .||.+
T Consensus 634 Gid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH-~Wf~g 682 (732)
T KOG0614|consen 634 GIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH-RWFEG 682 (732)
T ss_pred hhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh-hhhhc
Confidence 12568889999999999999999986 5676666 45544
No 383
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.93 E-value=6.6e-27 Score=234.53 Aligned_cols=238 Identities=17% Similarity=0.190 Sum_probs=178.4
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHH-hcCCCCCeeEEeeeEEecccCcCCcccEE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRL-RTVRHPNILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~L-k~LrHPnIlkv~d~~e~e~~d~~~~~~~i 102 (771)
..||.|. | +|++-.++.+|+..|||.+...+... ...+++.|.... +.-..|||++||+.+..|. ..
T Consensus 70 g~iG~G~fG--~V~KM~hk~sg~~mAVKrIr~~n~~k-eq~rll~e~d~~mks~~cp~IVkfyGa~F~EG--------dc 138 (361)
T KOG1006|consen 70 GEIGNGAFG--TVNKMLHKPSGKLMAVKRIRSNNIEK-EQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG--------DC 138 (361)
T ss_pred HHhcCCcch--hhhhhhcCccCcEEEEEEeeeccchH-HHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC--------ce
Confidence 3578888 8 99999999999999999998765533 334555566554 4456999999999988764 57
Q ss_pred EEEecCC-cchHHHHHHhC-C-CCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 103 YIVTEPV-MPLSEKIKELG-L-EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 103 yIVtE~v-~~L~~~L~~~~-~-~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
||.||.+ .+|..+.+.-- . .....+..+..+....+.||.||.+..+||||||||+||+++..|.+||||||+|..+
T Consensus 139 WiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqL 218 (361)
T KOG1006|consen 139 WICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQL 218 (361)
T ss_pred eeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhH
Confidence 9999999 56554443211 0 1112233444456677899999998889999999999999999999999999999887
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-----hhhcc-----
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-----ELRNT----- 249 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-----~l~~~----- 249 (771)
.++ +......+-..|||||.+...- .+|..++|+||||+.+||+.+|..|+... ++.++
T Consensus 219 v~S-------iAkT~daGCrpYmAPERi~p~~----~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdp 287 (361)
T KOG1006|consen 219 VDS-------IAKTVDAGCRPYMAPERIDPSD----KGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDP 287 (361)
T ss_pred HHH-------HHhhhccCCccccChhccCCcc----CCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCC
Confidence 652 2122223345899999987541 36888999999999999999999887532 22211
Q ss_pred ---------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 250 ---------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 250 ---------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
......+...+.-||..+-..||...+++++ +|++
T Consensus 288 p~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~-~fyr 331 (361)
T KOG1006|consen 288 PILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF-PFYR 331 (361)
T ss_pred CeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC-chhh
Confidence 2355668888999999999999999998887 4543
No 384
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.93 E-value=5.3e-26 Score=242.17 Aligned_cols=242 Identities=16% Similarity=0.224 Sum_probs=194.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.-|..-+.+|.|+ | .||-+..+.+|+-||+|.++++.... .-...+.||-++|.++..|.||.+-..||+
T Consensus 185 n~F~~~RvlGkGGFG--EV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeT------ 256 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFG--EVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFET------ 256 (591)
T ss_pred cceeeeEEEeccccc--ceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecC------
Confidence 3466677889988 8 99999999999999999998753322 234568899999999999999999999987
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
++.+|+|+..+ ++|.-+|-+.+..+....+ ..++..+|+.||.+||+ .+||.||+||+||++++.|.++|+|+|
T Consensus 257 --kd~LClVLtlMNGGDLkfHiyn~g~~gF~e~r-a~FYAAEi~cGLehlH~-~~iVYRDLKPeNILLDd~GhvRISDLG 332 (591)
T KOG0986|consen 257 --KDALCLVLTLMNGGDLKFHIYNHGNPGFDEQR-ARFYAAEIICGLEHLHR-RRIVYRDLKPENILLDDHGHVRISDLG 332 (591)
T ss_pred --CCceEEEEEeecCCceeEEeeccCCCCCchHH-HHHHHHHHHhhHHHHHh-cceeeccCChhheeeccCCCeEeeccc
Confidence 55999999999 6788788776543333333 45669999999999997 899999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh-------hhh
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE-------ELR 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~-------~l~ 247 (771)
++..+..... + ...+++..|||||++.++ .|++..|.|+|||+||||+.|..||... ++.
T Consensus 333 LAvei~~g~~-----~--~~rvGT~GYMAPEvl~ne------~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvd 399 (591)
T KOG0986|consen 333 LAVEIPEGKP-----I--RGRVGTVGYMAPEVLQNE------VYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVD 399 (591)
T ss_pred eEEecCCCCc-----c--ccccCcccccCHHHHcCC------cccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHH
Confidence 9998876322 1 123556699999999884 5889999999999999999999998532 111
Q ss_pred ---------ccCCCCcchHHHHHHHhccCCCCCCCh-----HHHhhCCCCCcc
Q 004157 248 ---------NTASIPKSLLPDYQRLLSSMPSRRLNS-----SKLIENSEYFQN 286 (771)
Q Consensus 248 ---------~~~~IP~~l~~~i~~lL~~~P~~Rps~-----~~lL~~~~fF~n 286 (771)
-..+.+++..++.+.||..+|.+|... +++-+| +||++
T Consensus 400 rr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~H-pfFk~ 451 (591)
T KOG0986|consen 400 RRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEH-PFFKD 451 (591)
T ss_pred HHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhC-ccccc
Confidence 114566778888999999999999854 566666 78876
No 385
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=7.8e-26 Score=237.64 Aligned_cols=254 Identities=18% Similarity=0.214 Sum_probs=196.1
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecc
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVEN 92 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~ 92 (771)
+.--.|.+...+|.|+ | +|-.|.++.+.+.+|||++.+... ++...+.-..|-++|... +-|.+++++.+|.+-
T Consensus 346 i~~tDFnFl~VlGKGSFG--KVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm- 422 (683)
T KOG0696|consen 346 IKATDFNFLMVLGKGSFG--KVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM- 422 (683)
T ss_pred eeecccceEEEeccCccc--eeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh-
Confidence 4445688888999999 9 999999999999999999987532 223345556677777766 467788888888763
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEE
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKL 170 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL 170 (771)
+.+|+||||| ++|.-+|++.+...+.. ..++...|+-||-|||+ .+||.||||.+||+++..|.+||
T Consensus 423 -------DRLyFVMEyvnGGDLMyhiQQ~GkFKEp~---AvFYAaEiaigLFFLh~-kgIiYRDLKLDNvmLd~eGHiKi 491 (683)
T KOG0696|consen 423 -------DRLYFVMEYVNGGDLMYHIQQVGKFKEPV---AVFYAAEIAIGLFFLHS-KGIIYRDLKLDNVMLDSEGHIKI 491 (683)
T ss_pred -------hheeeEEEEecCchhhhHHHHhcccCCch---hhhhhHHHHHHhhhhhc-CCeeeeeccccceEeccCCceEe
Confidence 4899999999 67998998876433222 23448899999999997 89999999999999999999999
Q ss_pred EccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc--
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN-- 248 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~-- 248 (771)
.|||+|..-.-. ......+++++.|+|||++.. +.|+.++|.|++|+|+|||+.|++||+.++...
T Consensus 492 ~DFGmcKEni~~------~~TTkTFCGTPdYiAPEIi~Y------qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF 559 (683)
T KOG0696|consen 492 ADFGMCKENIFD------GVTTKTFCGTPDYIAPEIIAY------QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELF 559 (683)
T ss_pred eecccccccccC------CcceeeecCCCcccccceEEe------cccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHH
Confidence 999999754321 223455677789999999876 588899999999999999999999998765322
Q ss_pred ------cC----CCCcchHHHHHHHhccCCCCCCChH----HHhhCCCCCcchhhhhhhhh
Q 004157 249 ------TA----SIPKSLLPDYQRLLSSMPSRRLNSS----KLIENSEYFQNKLVDTIHFM 295 (771)
Q Consensus 249 ------~~----~IP~~l~~~i~~lL~~~P~~Rps~~----~lL~~~~fF~n~lv~~~~~L 295 (771)
.. .++++...+.+.+|...|.+|+... +-+..++||++...+.++..
T Consensus 560 ~aI~ehnvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~ 620 (683)
T KOG0696|consen 560 QAIMEHNVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERR 620 (683)
T ss_pred HHHHHccCcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhc
Confidence 12 3445566778899999999998642 22333489987666554443
No 386
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=4.7e-25 Score=235.09 Aligned_cols=239 Identities=15% Similarity=0.188 Sum_probs=173.1
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHh--cCCCCCeeEEeeeEEecccCcC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLR--TVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk--~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
.-++.+.||.|. | .||+|.++ |+.||||+|.... .....+|.++.. .|||+||+.|+..-..++
T Consensus 212 qI~L~e~IGkGRyG--EVwrG~wr--Ge~VAVKiF~srd-----E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~---- 278 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFG--EVWRGRWR--GEDVAVKIFSSRD-----ERSWFRETEIYQTVMLRHENILGFIAADNKDN---- 278 (513)
T ss_pred eeEEEEEecCcccc--ceeecccc--CCceEEEEecccc-----hhhhhhHHHHHHHHHhccchhhhhhhccccCC----
Confidence 456778899999 9 99999998 9999999998532 234555555555 479999999998765443
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcC-------CCceecCCCCCCEEEcCCCc
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNND-------CKLVHGNVCLSSVVVTQTLD 167 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~-------~~ivH~dIkp~NI~v~~~G~ 167 (771)
.+-+.+|+||+|- ++|+++|.+.... .+...+.++.++.||.+||.+ -.|.|||||..||+|..+|.
T Consensus 279 gs~TQLwLvTdYHe~GSL~DyL~r~tv~----~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~ 354 (513)
T KOG2052|consen 279 GSWTQLWLVTDYHEHGSLYDYLNRNTVT----TEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 354 (513)
T ss_pred CceEEEEEeeecccCCcHHHHHhhccCC----HHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCc
Confidence 2367999999999 7999999986542 333456699999999999972 25999999999999999999
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhC----C-----
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG----M----- 238 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g----~----- 238 (771)
..|+|||++....+.... ..+.....+++.+|||||++...-..---..-..+||||||.++||+.-. +
T Consensus 355 C~IADLGLAv~h~~~t~~--idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey 432 (513)
T KOG2052|consen 355 CCIADLGLAVRHDSDTDT--IDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEY 432 (513)
T ss_pred EEEeeceeeEEecccCCc--ccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhh
Confidence 999999999877654221 12223334556699999998753111000111368999999999998752 1
Q ss_pred -CCCC--------hhhhhcc-------CCCCc---------chHHHHHHHhccCCCCCCChHHH
Q 004157 239 -RLSK--------TEELRNT-------ASIPK---------SLLPDYQRLLSSMPSRRLNSSKL 277 (771)
Q Consensus 239 -~p~~--------~~~l~~~-------~~IP~---------~l~~~i~~lL~~~P~~Rps~~~l 277 (771)
.||. .++++.+ .+||. .+..+++.|+..||..|.++-.+
T Consensus 433 ~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALri 496 (513)
T KOG2052|consen 433 QLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRI 496 (513)
T ss_pred cCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHH
Confidence 2331 1222221 34443 35667888999999999998665
No 387
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.92 E-value=4.7e-25 Score=240.61 Aligned_cols=234 Identities=15% Similarity=0.188 Sum_probs=184.8
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
...++++||+|. | .|+.+.-- .+..||||++...... .....+.+|+++|.+|+||||+.+++++..++
T Consensus 539 ~L~~~ekiGeGqFG--EVhLCeve-g~lkVAVK~Lr~~a~~-~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De------ 608 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFG--EVHLCEVE-GPLKVAVKILRPDATK-NARNDFLKEIKILSRLKHPNIVELLGVCVQDD------ 608 (807)
T ss_pred heehhhhhcCcccc--eeEEEEec-CceEEEEeecCcccch-hHHHHHHHHHHHHhccCCCCeeEEEeeeecCC------
Confidence 467889999999 9 99999854 4699999999865433 33567899999999999999999999998754
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
-+++||||+ ++|.++|.+.......... ...+..||+.|++||.+ +++|||||-+.|++|+.++.+||+|||.+
T Consensus 609 --PicmI~EYmEnGDLnqFl~aheapt~~t~~-~vsi~tqiasgmaYLes-~nfVHrd~a~rNcLv~~e~~iKiadfgms 684 (807)
T KOG1094|consen 609 --PLCMITEYMENGDLNQFLSAHELPTAETAP-GVSICTQIASGMAYLES-LNFVHRDLATRNCLVDGEFTIKIADFGMS 684 (807)
T ss_pred --chHHHHHHHhcCcHHHHHHhccCcccccch-hHHHHHHHHHHHHHHHh-hchhhccccccceeecCcccEEecCcccc
Confidence 789999999 7899999887543322222 23359999999999997 99999999999999999999999999999
Q ss_pred cccCCCCCCCCCCcccc--ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhC--CCCCCh---hh----
Q 004157 177 SEFDGNNEAANGPMLQY--AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG--MRLSKT---EE---- 245 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~--~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g--~~p~~~---~~---- 245 (771)
+.+-.. ++++. ..+.+.+|||+|.+.-+ ..+.++|+|+||+.+||+|.- ..|+.. ++
T Consensus 685 R~lysg------~yy~vqgr~vlpiRwmawEsillg------kFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven 752 (807)
T KOG1094|consen 685 RNLYSG------DYYRVQGRAVLPIRWMAWESILLG------KFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVEN 752 (807)
T ss_pred cccccC------CceeeecceeeeeeehhHHHHHhc------cccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHh
Confidence 976542 22222 23456699999998763 677899999999999999863 344421 11
Q ss_pred -------------hhccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 246 -------------LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 246 -------------l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
+....-.|..+.+++-+|++.+-++||+.+++-.
T Consensus 753 ~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 753 AGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred hhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 0112346778889999999999999999998743
No 388
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.92 E-value=4.5e-24 Score=243.26 Aligned_cols=262 Identities=13% Similarity=0.105 Sum_probs=174.8
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEEC----------------CCCCcEEEEEEeCCCCch--h----------HHHHH
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSK----------------DDGSPVSIFSISGTNAQD--G----------HLAAA 66 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k----------------~~g~~VaIK~~~~~~~~~--~----------~~~~~ 66 (771)
....+|++.++||+|+ | +||+|... ..++.|+||.+....... . ..+..
T Consensus 142 ~~~d~F~i~~~LG~GgFG--~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~ 219 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFG--ITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETG 219 (507)
T ss_pred ccccCceEeeEeecCCCe--EEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchh
Confidence 3455899999999999 9 99999752 345689999987532110 0 11223
Q ss_pred HHHHHHHhcCCCCCe-----eEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCC-----------------
Q 004157 67 RNGVKRLRTVRHPNI-----LAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLE----------------- 122 (771)
Q Consensus 67 ~~ei~~Lk~LrHPnI-----lkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~----------------- 122 (771)
..|+..+.+++|.++ +++++++.....++...+...|+|+||+ ++|.++|......
T Consensus 220 ~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~ 299 (507)
T PLN03224 220 MVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPD 299 (507)
T ss_pred HHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhh
Confidence 346777778876654 6677776543322222245789999999 5788888642100
Q ss_pred ----CCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccC
Q 004157 123 ----GSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVG 198 (771)
Q Consensus 123 ----~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~ 198 (771)
.......+..++.||+.+|.|||+ .+++||||||+||+++.++.+||+|||++........ ........+
T Consensus 300 ~~~~~~~~~~~~~~i~~ql~~aL~~lH~-~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-----~~~~~g~~t 373 (507)
T PLN03224 300 NMPQDKRDINVIKGVMRQVLTGLRKLHR-IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-----FNPLYGMLD 373 (507)
T ss_pred hcccccCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc-----cCccccCCC
Confidence 011123456678999999999996 8999999999999999999999999999876543110 001111224
Q ss_pred CCCCChhcccccccccc----------------CCCCCcchHHHHHHHHHHHhhCCC-CCCh-----hhh----------
Q 004157 199 AQYKPVELAKSDWTAVR----------------KSPPWSIDSWGLGCLIYELFSGMR-LSKT-----EEL---------- 246 (771)
Q Consensus 199 ~~Y~aPE~~~~~~~~~~----------------~~~~~~~Di~SLG~li~el~~g~~-p~~~-----~~l---------- 246 (771)
..|++||.+........ .......|+||+||++|+|++|.. ++.. ..+
T Consensus 374 p~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~ 453 (507)
T PLN03224 374 PRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRW 453 (507)
T ss_pred cceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHH
Confidence 58999998754211000 011235799999999999999863 3321 000
Q ss_pred ----------hccCCCCcchHHHHHHHhccCC---CCCCChHHHhhCCCCCcc
Q 004157 247 ----------RNTASIPKSLLPDYQRLLSSMP---SRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 247 ----------~~~~~IP~~l~~~i~~lL~~~P---~~Rps~~~lL~~~~fF~n 286 (771)
.....++....+++.+||..+| .+|+++.++|+| +||.+
T Consensus 454 r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H-p~f~~ 505 (507)
T PLN03224 454 RMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH-RFFLP 505 (507)
T ss_pred HhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC-CCcCC
Confidence 0113456678899999999765 689999999999 45543
No 389
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.92 E-value=6.9e-25 Score=243.09 Aligned_cols=235 Identities=15% Similarity=0.174 Sum_probs=187.2
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
..++.|.||+|. | .|++|.++.-+ -.||||++....... ....+.+|+..|.+|+|||+|++|+++.+
T Consensus 111 ~i~l~e~LG~GsFg--vV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~----- 182 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFG--VVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLD----- 182 (1039)
T ss_pred HHHHHHHhcCccee--eEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeecc-----
Confidence 456678899998 8 89999998654 378999987644432 57789999999999999999999999875
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
.-+.+|||.+ ++|.+.|.. ..........+..++.||+.|+.||.. .++|||||-..||++-.-..+||+||
T Consensus 183 ----qp~mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLes-krlvHRDLAARNlllasprtVKI~DF 256 (1039)
T KOG0199|consen 183 ----QPAMMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLES-KRLVHRDLAARNLLLASPRTVKICDF 256 (1039)
T ss_pred ----chhhHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhhhheecccceeeeecc
Confidence 2689999999 789999987 333344455567779999999999997 89999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCcccc--ccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCC-CCCCh----hhh
Q 004157 174 DVLSEFDGNNEAANGPMLQY--AWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGM-RLSKT----EEL 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~--~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~-~p~~~----~~l 246 (771)
|+.+.+..... ++.. ....+..|.|||.++. ..++.++|+|++|+.|||||+++ .|+.. .-+
T Consensus 257 GLmRaLg~ned-----~Yvm~p~rkvPfAWCaPEsLrh------~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL 325 (1039)
T KOG0199|consen 257 GLMRALGENED-----MYVMAPQRKVPFAWCAPESLRH------RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQIL 325 (1039)
T ss_pred cceeccCCCCc-----ceEecCCCcCcccccCHhHhcc------ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHH
Confidence 99998876432 1111 1223447899999986 46778999999999999999965 45532 112
Q ss_pred ---------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 247 ---------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 247 ---------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
......|+.+.+++++|+..+|..||++..+.+
T Consensus 326 ~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 326 KNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred HhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence 222456778999999999999999999988754
No 390
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=2.6e-25 Score=235.30 Aligned_cols=253 Identities=13% Similarity=0.141 Sum_probs=195.2
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-----chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-----QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-----~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
-+|-+...+|.|+ + .||++.+...++.||||+-..... .+.+.+.+.+|.++.+.|.||.|+++||+|..++
T Consensus 463 ~RYLlLhLLGrGGFS--EVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFS--EVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred HHHHHHHHhccccHH--HHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 3688888899997 6 899999998999999999875432 2245677889999999999999999999998753
Q ss_pred cCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcC-CCceecCCCCCCEEEc---CCC
Q 004157 93 IDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNND-CKLVHGNVCLSSVVVT---QTL 166 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~-~~ivH~dIkp~NI~v~---~~G 166 (771)
..+|-|.||| .+|.-+|+....-.+...+.| +.||+.||.||++. -.|||-||||.||++- .-|
T Consensus 541 -------dsFCTVLEYceGNDLDFYLKQhklmSEKEARSI---iMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacG 610 (775)
T KOG1151|consen 541 -------DSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSI---IMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACG 610 (775)
T ss_pred -------ccceeeeeecCCCchhHHHHhhhhhhHHHHHHH---HHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccc
Confidence 4899999999 369999998776544433334 89999999999972 2699999999999984 569
Q ss_pred cEEEEccCcccccCCCCCCCCCCcc-ccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh
Q 004157 167 DWKLHAFDVLSEFDGNNEAANGPML-QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE 245 (771)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~-~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~ 245 (771)
++||.|||++..+++........+- ...+.++-.|.|||.+.-+.. +...+.++|+||+|+++|.++.|+.||+.++
T Consensus 611 eIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgke--PPKIsnKVDVWSvGVIFyQClYGrKPFGhnq 688 (775)
T KOG1151|consen 611 EIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKE--PPKISNKVDVWSVGVIFYQCLYGRKPFGHNQ 688 (775)
T ss_pred eeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCC--CCccccceeeEeeehhhhhhhccCCCCCCch
Confidence 9999999999988876544322222 222334448999998764311 2345679999999999999999999997543
Q ss_pred hhc------------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcc
Q 004157 246 LRN------------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQN 286 (771)
Q Consensus 246 l~~------------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n 286 (771)
-.+ -..+..+...+|++||...-..|..+.++-.+ +||.-
T Consensus 689 sQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d-pyllP 746 (775)
T KOG1151|consen 689 SQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD-PYLLP 746 (775)
T ss_pred hHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC-ccccc
Confidence 211 02345568889999999999999999997766 56543
No 391
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=4.6e-24 Score=229.44 Aligned_cols=135 Identities=16% Similarity=0.200 Sum_probs=117.3
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-----CC---CeeEEeeeE
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-----HP---NILAFLHST 88 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-----HP---nIlkv~d~~ 88 (771)
..+|-+.+++|-|. + |||.+.+..+.+.||+|+... .+.+.+.+..||++|++++ |+ +||+++|.|
T Consensus 77 ~gRY~v~rKLGWGHFS--TVWLawDtq~~r~VAlKVvKS---AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~F 151 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFS--TVWLAWDTQNKRYVALKVVKS---AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHF 151 (590)
T ss_pred CceEEEEEeccccccc--eeEEEeeccCCeEEEEEEEeh---hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccc
Confidence 37899999999998 8 999999999999999999863 2356788999999999996 33 699999999
Q ss_pred EecccCcCCcccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEE
Q 004157 89 EVENIDATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVV 162 (771)
Q Consensus 89 e~e~~d~~~~~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v 162 (771)
.....+ +.++|+|+|+.+ .|..+|+.....+.. ...++.+++||+.||.|||.+|+|||-||||+||++
T Consensus 152 khsGpN----G~HVCMVfEvLGdnLLklI~~s~YrGlp-l~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 152 KHSGPN----GQHVCMVFEVLGDNLLKLIKYSNYRGLP-LSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLL 221 (590)
T ss_pred eecCCC----CcEEEEEehhhhhHHHHHHHHhCCCCCc-HHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeee
Confidence 988777 679999999996 588888887665543 445788899999999999999999999999999999
No 392
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91 E-value=1.7e-24 Score=237.51 Aligned_cols=246 Identities=13% Similarity=0.212 Sum_probs=184.3
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
|...+.||.|. | .|..+.+.+++..||.|.+.+... ...+....+.|-.+|..-..+-||++|..|.+
T Consensus 631 Fvkik~iGvGAFG--eV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQD-------- 700 (1034)
T KOG0608|consen 631 FVKIKTIGVGAFG--EVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQD-------- 700 (1034)
T ss_pred eEEEeeecccccc--eeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEecc--------
Confidence 67778899999 9 999999999999999999986532 12345567788889999999999999999987
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
+.++|+||+|+ +++..+|-+.+..+ ++.-.+++..+.+|+++.|. .|+|||||||+||||+.+|.+||.|||+|
T Consensus 701 kdnLYFVMdYIPGGDmMSLLIrmgIFe---E~LARFYIAEltcAiesVHk-mGFIHRDiKPDNILIDrdGHIKLTDFGLC 776 (1034)
T KOG0608|consen 701 KDNLYFVMDYIPGGDMMSLLIRMGIFE---EDLARFYIAELTCAIESVHK-MGFIHRDIKPDNILIDRDGHIKLTDFGLC 776 (1034)
T ss_pred CCceEEEEeccCCccHHHHHHHhccCH---HHHHHHHHHHHHHHHHHHHh-ccceecccCccceEEccCCceeeeecccc
Confidence 45999999999 67888777766533 33445669999999999995 99999999999999999999999999999
Q ss_pred cccCCC---------CCCC------------CC---------------CccccccccCCCCCChhccccccccccCCCCC
Q 004157 177 SEFDGN---------NEAA------------NG---------------PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPW 220 (771)
Q Consensus 177 ~~~~~~---------~~~~------------~~---------------~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~ 220 (771)
+-+.-. +... .+ .+.....+++..|+|||++.. .+++.
T Consensus 777 TGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r------~g~~q 850 (1034)
T KOG0608|consen 777 TGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR------TGYTQ 850 (1034)
T ss_pred ccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc------cCccc
Confidence 743210 0000 00 011111123448999999875 57888
Q ss_pred cchHHHHHHHHHHHhhCCCCCChhhh----------hc------cCCCCcchHHHHHHHhccCCCCCCC--hHHHhhCCC
Q 004157 221 SIDSWGLGCLIYELFSGMRLSKTEEL----------RN------TASIPKSLLPDYQRLLSSMPSRRLN--SSKLIENSE 282 (771)
Q Consensus 221 ~~Di~SLG~li~el~~g~~p~~~~~l----------~~------~~~IP~~l~~~i~~lL~~~P~~Rps--~~~lL~~~~ 282 (771)
.+|.|+.|+++|||+.|.+||..+.. +. ..++.++...+|++|+- .++.|+. -++-++.++
T Consensus 851 ~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHp 929 (1034)
T KOG0608|consen 851 LCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHP 929 (1034)
T ss_pred cchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCc
Confidence 99999999999999999999854321 11 14677888888887654 3456653 333334447
Q ss_pred CCcch
Q 004157 283 YFQNK 287 (771)
Q Consensus 283 fF~n~ 287 (771)
||+..
T Consensus 930 fFkgI 934 (1034)
T KOG0608|consen 930 FFKGI 934 (1034)
T ss_pred ccccc
Confidence 88653
No 393
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.91 E-value=5.8e-23 Score=205.08 Aligned_cols=210 Identities=21% Similarity=0.319 Sum_probs=169.6
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEEE
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIV 105 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyIV 105 (771)
|+.|. | .||+++...+|+.++||++....... ....+.+|++.++.++|++|+++++.+... ...|++
T Consensus 1 l~~g~~~--~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--------~~~~~~ 69 (215)
T cd00180 1 LGEGGFG--TVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDE--------NHLYLV 69 (215)
T ss_pred CCcCCce--EEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecC--------CeEEEE
Confidence 35554 5 99999998889999999998653321 346788999999999999999999999863 378999
Q ss_pred ecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-CCcEEEEccCcccccCCC
Q 004157 106 TEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKLHAFDVLSEFDGN 182 (771)
Q Consensus 106 tE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~-~G~~KL~dFgla~~~~~~ 182 (771)
+|++. +|.+++.... .......+...+.+++.+|.+||+ .+++|+||+|.||+++. ++.++|+|||.+......
T Consensus 70 ~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~-~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~ 146 (215)
T cd00180 70 MEYCEGGSLKDLLKENE--GKLSEDEILRILLQILEGLEYLHS-NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSD 146 (215)
T ss_pred EecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCC
Confidence 99995 7999888752 112344456669999999999996 89999999999999999 899999999999876542
Q ss_pred CCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhccCCCCcchHHHHHH
Q 004157 183 NEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNTASIPKSLLPDYQR 262 (771)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~~~IP~~l~~~i~~ 262 (771)
.. ..........|++||..... ..++.+.|+|+||+++|++ ..+.+++.+
T Consensus 147 ~~------~~~~~~~~~~~~~pe~~~~~-----~~~~~~~D~~~lg~~~~~l-------------------~~~~~~l~~ 196 (215)
T cd00180 147 KS------LLKTIVGTPAYMAPEVLLGK-----GYYSEKSDIWSLGVILYEL-------------------PELKDLIRK 196 (215)
T ss_pred cc------hhhcccCCCCccChhHhccc-----CCCCchhhhHHHHHHHHHH-------------------HHHHHHHHH
Confidence 11 01112234589999998652 2566789999999999999 568889999
Q ss_pred HhccCCCCCCChHHHhhC
Q 004157 263 LLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 263 lL~~~P~~Rps~~~lL~~ 280 (771)
|+..+|..||++.+++++
T Consensus 197 ~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 197 MLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HhhCCcccCcCHHHHhhC
Confidence 999999999999999875
No 394
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.91 E-value=5.4e-24 Score=264.73 Aligned_cols=221 Identities=19% Similarity=0.273 Sum_probs=165.5
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|+..+.+|.|+ | .||+|+++.+|..|+||++...... ...|++.+++++||||+++++++..+
T Consensus 692 ~~~~~~ig~G~~g--~Vy~~~~~~~~~~vavK~~~~~~~~------~~~~~~~l~~l~HpnIv~~~~~~~~~-------- 755 (968)
T PLN00113 692 LKEENVISRGKKG--ASYKGKSIKNGMQFVVKEINDVNSI------PSSEIADMGKLQHPNIVKLIGLCRSE-------- 755 (968)
T ss_pred CCcccEEccCCCe--eEEEEEECCCCcEEEEEEccCCccc------cHHHHHHHhhCCCCCcceEEEEEEcC--------
Confidence 44456788888 8 9999999999999999998643221 23468899999999999999999864
Q ss_pred cEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcC--CCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNND--CKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 100 ~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~--~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
...|+||||+ ++|.++++.. .......++.||+.||.|||.. .+++||||||+||+++.++..++. |+.
T Consensus 756 ~~~~lv~Ey~~~g~L~~~l~~l------~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~ 828 (968)
T PLN00113 756 KGAYLIHEYIEGKNLSEVLRNL------SWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSL 828 (968)
T ss_pred CCCEEEEeCCCCCcHHHHHhcC------CHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecc
Confidence 3689999999 5799998642 1223445599999999999942 489999999999999999888875 554
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----h----
Q 004157 176 LSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----L---- 246 (771)
Q Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-----l---- 246 (771)
....... ....++..|+|||+..+ ..++.++|||||||++|||++|+.|+.... +
T Consensus 829 ~~~~~~~----------~~~~~t~~y~aPE~~~~------~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~ 892 (968)
T PLN00113 829 PGLLCTD----------TKCFISSAYVAPETRET------KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWA 892 (968)
T ss_pred ccccccC----------CCccccccccCcccccC------CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHH
Confidence 4322211 11133458999999875 357789999999999999999998864211 0
Q ss_pred ---------hc-c-CCC----C------cchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 ---------RN-T-ASI----P------KSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ---------~~-~-~~I----P------~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.. . ..+ + ..+.+++.+|++.+|.+||++.++++.
T Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 893 RYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred HHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 00 0 001 1 124566789999999999999998764
No 395
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.91 E-value=1.1e-24 Score=244.60 Aligned_cols=237 Identities=16% Similarity=0.201 Sum_probs=188.6
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCC---CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDG---SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g---~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
-.|.+.||.|. | .|++|+.|..| ..||||.++.. ..+.+...+..|..+|-++.||||+++.++....
T Consensus 631 i~Ie~VIGaGEFG--EVc~GrLk~pgkre~~VAIKTLK~G-ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks----- 702 (996)
T KOG0196|consen 631 VKIEKVIGAGEFG--EVCSGRLKLPGKREITVAIKTLKAG-YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKS----- 702 (996)
T ss_pred eEEEEEEeccccc--ceecccccCCCCcceeEEEeeeccC-ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecC-----
Confidence 35677889998 9 99999998776 47999999754 3445566788899999999999999999998753
Q ss_pred CcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
.-+.|||||| ++|+.+|+.+.-. .....+.-.|+-|+.|++||-+ .++|||||-..||+||.+-..|++|||
T Consensus 703 ---~PvMIiTEyMENGsLDsFLR~~DGq--ftviQLVgMLrGIAsGMkYLsd-m~YVHRDLAARNILVNsnLvCKVsDFG 776 (996)
T KOG0196|consen 703 ---KPVMIITEYMENGSLDSFLRQNDGQ--FTVIQLVGMLRGIASGMKYLSD-MNYVHRDLAARNILVNSNLVCKVSDFG 776 (996)
T ss_pred ---ceeEEEhhhhhCCcHHHHHhhcCCc--eEeehHHHHHHHHHHHhHHHhh-cCchhhhhhhhheeeccceEEEecccc
Confidence 4789999999 6899999987522 2222234448999999999995 999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh----hh--
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE----LR-- 247 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~----l~-- 247 (771)
+++.+.++.+ ..+...+...+.+|.|||.+.. ...+.++|+||+|++|||+++ |..|+.... ++
T Consensus 777 LSRvledd~~---~~ytt~GGKIPiRWTAPEAIa~------RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaI 847 (996)
T KOG0196|consen 777 LSRVLEDDPE---AAYTTLGGKIPIRWTAPEAIAY------RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 847 (996)
T ss_pred ceeecccCCC---ccccccCCccceeecChhHhhh------cccCchhhccccceEEEEecccCCCcccccchHHHHHHH
Confidence 9997765431 1222334445569999999875 467889999999999999887 555653211 11
Q ss_pred -------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 248 -------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 248 -------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.....|..|..++..|++++-..||.+.+++..
T Consensus 848 e~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 848 EQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred HhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 124567789999999999999999999998764
No 396
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.91 E-value=4.5e-24 Score=207.32 Aligned_cols=201 Identities=13% Similarity=0.109 Sum_probs=154.6
Q ss_pred eecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccCcCCcc
Q 004157 22 NIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-RHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 22 ~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
.-++.+|.|+ | .|-+-+++.+|.-.|+|.+.....+. ....+.+|+.+..+. .+|.++.||+.+..+.
T Consensus 49 ~~i~elGrGayG--~vekmrh~~sg~imAvKri~~tvn~q-~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg------- 118 (282)
T KOG0984|consen 49 VGIEELGRGAYG--VVEKMRHIQSGTIMAVKRIRATVNSQ-EQKRLLMDLDIIMRTVDCPFTVHFYGALFREG------- 118 (282)
T ss_pred hhhhhhcCCccc--hhhheeeccCCeEEEEeeehhhcChH-HHHHHHHhhhhhccCCCCCeEEEeehhhhccc-------
Confidence 3356788887 8 67777788899999999998765543 344556677766554 6999999999887654
Q ss_pred cEEEEEecCC-cchHHHHHHh-CCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 100 ITIYIVTEPV-MPLSEKIKEL-GLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 100 ~~iyIVtE~v-~~L~~~L~~~-~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
.++|.||.+ .+|+.+.++- .......+..+-.+...|+.||.|||++..++||||||+||++|.+|.+|+||||.+.
T Consensus 119 -dvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 119 -DVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred -cEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccce
Confidence 699999999 6776655442 2222333445667789999999999998899999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCC
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~ 242 (771)
.+.++- ...-..+-.+|+|||.+..+.. .+.|+.++|+||||+.|.||..++.|+.
T Consensus 198 ~L~dSi-------Akt~daGCkpYmaPEri~~e~n--~~gY~vksDvWSLGItmiElA~lr~PY~ 253 (282)
T KOG0984|consen 198 YLVDSI-------AKTMDAGCKPYMAPERINPELN--QKGYSVKSDVWSLGITMIEMAILRFPYE 253 (282)
T ss_pred eehhhh-------HHHHhcCCCccCChhhcCcccC--cccceeehhhhhhhhhhhhhhhcccccc
Confidence 776531 1111223348999999986533 2478899999999999999999987764
No 397
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.90 E-value=1.4e-24 Score=236.80 Aligned_cols=195 Identities=21% Similarity=0.215 Sum_probs=160.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC------chhHHHHHHHHHHHHhcCC---CCCeeEEeeeEE
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA------QDGHLAAARNGVKRLRTVR---HPNILAFLHSTE 89 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~------~~~~~~~~~~ei~~Lk~Lr---HPnIlkv~d~~e 89 (771)
.|+..+++|.|. | .|+.|++|+.+..|.||.+.++.- ++..+-.+-.|+++|.+|+ |+||++++++||
T Consensus 562 ~yttlq~lG~GAyG--kV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYG--KVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cceeeeeccccccc--eEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 599999999999 9 999999999999999999987531 1222334557999999998 999999999999
Q ss_pred ecccCcCCcccEEEEEecCCc---chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC
Q 004157 90 VENIDATSTKITIYIVTEPVM---PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G 166 (771)
++ .++||+||.-+ +|.++|...+...+... +++++||+.|+++||. .+|||||||-+||.|+.+|
T Consensus 640 dd--------d~yyl~te~hg~gIDLFd~IE~kp~m~E~eA---k~IFkQV~agi~hlh~-~~ivhrdikdenvivd~~g 707 (772)
T KOG1152|consen 640 DD--------DYYYLETEVHGEGIDLFDFIEFKPRMDEPEA---KLIFKQVVAGIKHLHD-QGIVHRDIKDENVIVDSNG 707 (772)
T ss_pred cC--------CeeEEEecCCCCCcchhhhhhccCccchHHH---HHHHHHHHhccccccc-cCceecccccccEEEecCC
Confidence 85 38999999985 59999988765444333 4459999999999995 9999999999999999999
Q ss_pred cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCC
Q 004157 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS 241 (771)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~ 241 (771)
-+||+|||-+....+. |+- .++++..|.|||++.+. +..+..-|||+||+|+|.+.....|+
T Consensus 708 ~~klidfgsaa~~ksg------pfd--~f~gtv~~aapevl~g~-----~y~gk~qdiwalgillytivykenpy 769 (772)
T KOG1152|consen 708 FVKLIDFGSAAYTKSG------PFD--VFVGTVDYAAPEVLGGE-----KYLGKPQDIWALGILLYTIVYKENPY 769 (772)
T ss_pred eEEEeeccchhhhcCC------Ccc--eeeeeccccchhhhCCC-----ccCCCcchhhhhhheeeEEEeccCCC
Confidence 9999999998776653 221 24556699999999885 45567889999999999998876654
No 398
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.90 E-value=3.7e-24 Score=229.88 Aligned_cols=200 Identities=15% Similarity=0.218 Sum_probs=152.4
Q ss_pred CCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHh--cCCCCCeeEEeeeEEecccCc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLR--TVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk--~LrHPnIlkv~d~~e~e~~d~ 95 (771)
.+-++.+.+++|. | .||+|... ++.||||+|.. ...+.+.+|-.+.+ .|+|+||++|+..-+.-+.+
T Consensus 210 ~pl~l~eli~~Grfg--~V~KaqL~--~~~VAVKifp~-----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~- 279 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFG--CVWKAQLD--NRLVAVKIFPE-----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD- 279 (534)
T ss_pred CchhhHHHhhcCccc--eeehhhcc--CceeEEEecCH-----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcc-
Confidence 3677888899998 9 99999875 79999999974 23455666655554 56899999999876643322
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCC--------CceecCCCCCCEEEcCC
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDC--------KLVHGNVCLSSVVVTQT 165 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~--------~ivH~dIkp~NI~v~~~ 165 (771)
...++|||||. ++|.++|+.+...... ...++..+++||+|||++. .|+|||||..||+|..+
T Consensus 280 ---~~eywLVt~fh~kGsL~dyL~~ntisw~~----~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D 352 (534)
T KOG3653|consen 280 ---RMEYWLVTEFHPKGSLCDYLKANTISWNS----LCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKND 352 (534)
T ss_pred ---ccceeEEeeeccCCcHHHHHHhccccHHH----HHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccC
Confidence 45899999999 7999999998654332 3445899999999999844 59999999999999999
Q ss_pred CcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCC
Q 004157 166 LDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR 239 (771)
Q Consensus 166 G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~ 239 (771)
+...|+|||++..+........ ..+.+++.+|||||++.+.-..-....-.++||||+|.++|||++...
T Consensus 353 lTccIaDFGLAl~~~p~~~~~d----~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~ 422 (534)
T KOG3653|consen 353 LTCCIADFGLALRLEPGKPQGD----THGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCT 422 (534)
T ss_pred CcEEeeccceeEEecCCCCCcc----hhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999988764322111 223456679999999987532211222347999999999999998643
No 399
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.4e-23 Score=215.69 Aligned_cols=250 Identities=16% Similarity=0.226 Sum_probs=189.9
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHHHHHHHHHHhcC-CCCCeeEEeeeEEecccC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAAARNGVKRLRTV-RHPNILAFLHSTEVENID 94 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~~~~ei~~Lk~L-rHPnIlkv~d~~e~e~~d 94 (771)
-..|.+.+.||.|+ . +|..+..+.+.+-||+|++.+.-.++ +.+.-...|-.....- .||.++.++.+|.+++
T Consensus 249 l~df~ll~vigrgsya--kvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtes-- 324 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYA--KVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES-- 324 (593)
T ss_pred cccceeeeeecCcchh--hhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccc--
Confidence 34688999999986 4 89999999999999999998764333 3344445555555554 5999999999999875
Q ss_pred cCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 95 ATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
.+++|.||| ++|.-++++.....++. ..++-..|+.||.|||+ .|||.||||.+||+++..|.+||.|
T Consensus 325 ------rlffvieyv~ggdlmfhmqrqrklpeeh---arfys~ei~lal~flh~-rgiiyrdlkldnvlldaeghikltd 394 (593)
T KOG0695|consen 325 ------RLFFVIEYVNGGDLMFHMQRQRKLPEEH---ARFYSAEICLALNFLHE-RGIIYRDLKLDNVLLDAEGHIKLTD 394 (593)
T ss_pred ------eEEEEEEEecCcceeeehhhhhcCcHHH---hhhhhHHHHHHHHHHhh-cCeeeeeccccceEEccCCceeecc
Confidence 899999999 57877776655433322 33447899999999997 8999999999999999999999999
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh---------
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT--------- 243 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~--------- 243 (771)
+|.|..--..+. ....+++++.|.|||++.+ ..|++.+|.|+||+||+||+.|+.||+-
T Consensus 395 ygmcke~l~~gd------~tstfcgtpnyiapeilrg------eeygfsvdwwalgvlmfemmagrspfdivgm~n~d~n 462 (593)
T KOG0695|consen 395 YGMCKEGLGPGD------TTSTFCGTPNYIAPEILRG------EEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMN 462 (593)
T ss_pred cchhhcCCCCCc------ccccccCCCcccchhhhcc------cccCceehHHHHHHHHHHHHcCCCCcceecCCCcccc
Confidence 999976443221 1345677789999999998 4889999999999999999999988842
Q ss_pred -hh------hhccCCCCcc----hHHHHHHHhccCCCCCCCh------HHHhhCCCCCcchhhhhhhh
Q 004157 244 -EE------LRNTASIPKS----LLPDYQRLLSSMPSRRLNS------SKLIENSEYFQNKLVDTIHF 294 (771)
Q Consensus 244 -~~------l~~~~~IP~~----l~~~i~~lL~~~P~~Rps~------~~lL~~~~fF~n~lv~~~~~ 294 (771)
++ +.....||.+ ....++..|+.+|++|... .++-.| .||++.-.+.++.
T Consensus 463 tedylfqvilekqiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h-~ffr~idwd~leq 529 (593)
T KOG0695|consen 463 TEDYLFQVILEKQIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSH-AFFRSIDWDLLEQ 529 (593)
T ss_pred hhHHHHHHHhhhcccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcc-hhhhhCCHHHHhh
Confidence 11 1122456665 4566888999999999853 344444 7887655554443
No 400
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.89 E-value=5.2e-22 Score=202.22 Aligned_cols=199 Identities=21% Similarity=0.281 Sum_probs=159.3
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
|.+++.|+.|. | +||+|+...+++.|+||.+...... ...+.+.+|++.++.++|+||+++++.+...
T Consensus 1 ~~~~~~i~~g~~~--~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-------- 69 (225)
T smart00221 1 YELGKKLGEGAFG--KVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDP-------- 69 (225)
T ss_pred CceeeEeecCCCe--EEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecC--------
Confidence 67788898887 7 9999999988999999999865433 2467889999999999999999999998763
Q ss_pred cEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 100 ~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...|+++|++ ++|.+++...... .....+..++.|++.+|.|||+ .+++|+||+|.||+++.++.++|+|||++.
T Consensus 70 ~~~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh~-~~i~h~di~~~ni~v~~~~~~~l~d~g~~~ 146 (225)
T smart00221 70 EPLYLVMEYCEGGDLFDYLRKKGGK--LSEEEARFYLRQILEALEYLHS-LGIVHRDLKPENILLGMDGLVKLADFGLAR 146 (225)
T ss_pred CceEEEEeccCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCCCEEEeeCceee
Confidence 3789999999 3799888775421 2344466679999999999996 899999999999999999999999999988
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~ 243 (771)
........ ..........|++||..... ..++.++|+|+||+++|+|++|..+|..
T Consensus 147 ~~~~~~~~-----~~~~~~~~~~~~~pe~~~~~-----~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 147 FIHRDLAA-----LLKTVKGTPFYLAPEVLLGG-----KGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred EecCcccc-----cccceeccCCcCCHhHhcCC-----CCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 76543200 01112334579999997411 3455689999999999999999988854
No 401
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.87 E-value=6e-22 Score=232.80 Aligned_cols=236 Identities=16% Similarity=0.197 Sum_probs=180.6
Q ss_pred ceecCCCCCCC-CceEEEEeEEC----C---CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEec
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSK----D---DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVE 91 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k----~---~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e 91 (771)
.++++.+|.|. | +|++|.-+ . ....|+||.+...... ...+.+..|+++|+.+. ||||+.+++.+...
T Consensus 298 l~~~~~lg~g~fG--~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~~ 374 (609)
T KOG0200|consen 298 LKLGKYLGEGAFG--QVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQD 374 (609)
T ss_pred ccccceeeccccc--ceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence 35667889988 8 88888743 1 1457999998765443 56788999999999985 99999999998762
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhC---------CCCC----CcHHHHHHHHHHHHHHHHHHHcCCCceecCCC
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELG---------LEGS----QRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVC 156 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~---------~~~~----~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIk 156 (771)
..+++|+||| +.|..+|+... .... .....+.-+.+||+.|++||++ .++|||||-
T Consensus 375 --------~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~-~~~vHRDLA 445 (609)
T KOG0200|consen 375 --------GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS-VPCVHRDLA 445 (609)
T ss_pred --------CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh-CCccchhhh
Confidence 3789999999 78999998876 1000 1223355669999999999997 899999999
Q ss_pred CCCEEEcCCCcEEEEccCcccccCCCCCCCCCCcccccc--ccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHH
Q 004157 157 LSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAW--LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYEL 234 (771)
Q Consensus 157 p~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~--~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el 234 (771)
..||+++.+..+|++|||+++...... .+..... ..+..|||||.+.. ..++.++|+||+|+++||+
T Consensus 446 aRNVLi~~~~~~kIaDFGlar~~~~~~-----~y~~~~~~~~LP~kWmApEsl~~------~~ft~kSDVWSfGI~L~Ei 514 (609)
T KOG0200|consen 446 ARNVLITKNKVIKIADFGLARDHYNKD-----YYRTKSSAGTLPVKWMAPESLFD------RVFTSKSDVWSFGILLWEI 514 (609)
T ss_pred hhhEEecCCCEEEEccccceeccCCCC-----ceEecCCCCccceeecCHHHhcc------CcccccchhhHHHHHHHHH
Confidence 999999999999999999998655421 1110111 14557999999876 4678899999999999999
Q ss_pred hh-CCCCCCh----hhh----------hccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 235 FS-GMRLSKT----EEL----------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 235 ~~-g~~p~~~----~~l----------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
|+ |..|+.. .++ ......+.++.++++.|++.+|+.||++.++.+
T Consensus 515 fsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 515 FTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred hhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 99 4455542 111 122345677888899999999999999998764
No 402
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.87 E-value=1.5e-23 Score=232.26 Aligned_cols=243 Identities=17% Similarity=0.231 Sum_probs=192.8
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
++-.|++..++|+|+ | .||+++++.+++.++||+++..... ....+..|+-+++..+||||+.|+..+-..
T Consensus 13 P~ddyellqrvgsgTyg--dvyKaRd~~s~elaavkvVkLep~d--d~~~iqqei~~~~dc~h~nivay~gsylr~---- 84 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYG--DVYKARDKRSGELAAVKVVKLEPGD--DFSGIQQEIGMLRDCRHPNIVAYFGSYLRR---- 84 (829)
T ss_pred CccchhheeeecCCccc--chhhhcccccCchhhheeeeccCCc--cccccccceeeeecCCCcChHHHHhhhhhh----
Confidence 677899999999999 9 9999999999999999999876444 356678899999999999999999999763
Q ss_pred CCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEcc
Q 004157 96 TSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAF 173 (771)
Q Consensus 96 ~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dF 173 (771)
..++|+|||| ++|.+...-.+. ..+..|.+..+..+++|+|||+ .+-+|||||-.||++++.|++||.||
T Consensus 85 ----dklwicMEycgggslQdiy~~Tgp---lselqiayvcRetl~gl~ylhs-~gk~hRdiKGanilltd~gDvklaDf 156 (829)
T KOG0576|consen 85 ----DKLWICMEYCGGGSLQDIYHVTGP---LSELQIAYVCRETLQGLKYLHS-QGKIHRDIKGANILLTDEGDVKLADF 156 (829)
T ss_pred ----cCcEEEEEecCCCcccceeeeccc---chhHHHHHHHhhhhccchhhhc-CCcccccccccceeecccCceeeccc
Confidence 3789999999 467765444332 3344577779999999999997 88899999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCC-CCChhhhhc----
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMR-LSKTEELRN---- 248 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~-p~~~~~l~~---- 248 (771)
|.+..+... ...+..+.++..||+||+..-+ .+..|...+|+|++|+...|+-.-.+ +|+...++.
T Consensus 157 gvsaqitat------i~KrksfiGtpywmapEvaave---rkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~Lm 227 (829)
T KOG0576|consen 157 GVSAQITAT------IAKRKSFIGTPYWMAPEVAAVE---RKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLM 227 (829)
T ss_pred Cchhhhhhh------hhhhhcccCCccccchhHHHHH---hcccccccccccccccchhhhhhcCCcccccchHHHHHHh
Confidence 998776542 1223445666789999997432 23467789999999988888765443 344433322
Q ss_pred ------------cCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 249 ------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 249 ------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
-..-...+.++++.+|..+|++||+++.+|.| +|..
T Consensus 228 TkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h-~fvs 275 (829)
T KOG0576|consen 228 TKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH-PFVS 275 (829)
T ss_pred hccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheec-eeec
Confidence 12334458899999999999999999999997 5553
No 403
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.87 E-value=4.9e-22 Score=223.97 Aligned_cols=231 Identities=19% Similarity=0.232 Sum_probs=174.7
Q ss_pred cCCCCCCC-CceEEEEeEECCCCC----cEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 24 GDPYPSAW-GSWSHFQGTSKDDGS----PVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~~g~----~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
.++||+|. | +||+|.+.-.|+ +|+||++....... .-..+..|+-+|.+|+|||+++++.++...
T Consensus 701 ~kvLGsgAfG--tV~kGiw~Pege~vKipVaiKvl~~~t~~~-~s~e~LdeAl~masldHpnl~RLLgvc~~s------- 770 (1177)
T KOG1025|consen 701 DKVLGSGAFG--TVYKGIWIPEGENVKIPVAIKVLIEFTSPK-ASIELLDEALRMASLDHPNLLRLLGVCMLS------- 770 (1177)
T ss_pred hceeccccce--eEEeeeEecCCceecceeEEEEeeccCCch-hhHHHHHHHHHHhcCCCchHHHHhhhcccc-------
Confidence 45688998 9 999999976665 78999887543332 234566789999999999999999999863
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
.+.|||+++ +.|.++++..+. .......+ .+.+||++||+|||. .++|||||-..||+|.+-..+|+.|||++
T Consensus 771 --~~qlvtq~mP~G~LlDyvr~hr~-~igsq~lL-nw~~QIAkgM~YLe~-qrlVHrdLaaRNVLVksP~hvkitdfgla 845 (1177)
T KOG1025|consen 771 --TLQLVTQLMPLGCLLDYVREHRD-NIGSQDLL-NWCYQIAKGMKYLEE-QRLVHRDLAARNVLVKSPNHVKITDFGLA 845 (1177)
T ss_pred --hHHHHHHhcccchHHHHHHHhhc-cccHHHHH-HHHHHHHHHHHHHHh-cchhhhhhhhhheeecCCCeEEEEecchh
Confidence 588999999 789999988542 12233333 349999999999995 89999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCChhh----------
Q 004157 177 SEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSKTEE---------- 245 (771)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~~~~---------- 245 (771)
........ .+.......+..|+|-|.+.. ..++.++|+||||+.+||+++ |..|+..-.
T Consensus 846 ~ll~~d~~----ey~~~~gK~pikwmale~i~~------~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ 915 (1177)
T KOG1025|consen 846 KLLAPDEK----EYSAPGGKVPIKWMALESIRI------RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEK 915 (1177)
T ss_pred hccCcccc----cccccccccCcHHHHHHHhhc------cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhc
Confidence 87765322 222222233446777777654 578889999999999999998 555554322
Q ss_pred ---hhccCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 246 ---LRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 246 ---l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
+.+....+-++.-.+.+|+..++..||++.++..
T Consensus 916 geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 916 GERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred cccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 2222334455667778999999999999988754
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.85 E-value=2.1e-21 Score=236.19 Aligned_cols=202 Identities=20% Similarity=0.190 Sum_probs=137.4
Q ss_pred HhcCCC-CCeeEEeeeEEecccCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCc
Q 004157 73 LRTVRH-PNILAFLHSTEVENIDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKL 150 (771)
Q Consensus 73 Lk~LrH-PnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~i 150 (771)
++.++| +||++++|++.....++ .....+++++|++ .+|.++|.... .......+..+++||+.||.|||+ ++|
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~-~gI 101 (793)
T PLN00181 26 SKSLSHIDYVRSLLGSHKEGNLDG-LDDDSIVRALECEDVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAHS-QGI 101 (793)
T ss_pred cchhhHHHHHHHhhcccCCccccc-cccchhhhhhccCCccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHHh-CCe
Confidence 456666 58888888874322111 1124688899988 68999997532 112344567789999999999996 999
Q ss_pred eecCCCCCCEEEcCCCcEEEEccCcccccCCCCCC-----CCC------------------------CccccccccCCCC
Q 004157 151 VHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEA-----ANG------------------------PMLQYAWLVGAQY 201 (771)
Q Consensus 151 vH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~-----~~~------------------------~~~~~~~~~~~~Y 201 (771)
+||||||+||||+..|.+|++|||.+......... ..+ +.......++..|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999988888887777776543221000 000 0000112234469
Q ss_pred CChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh--hhcc--CCC-------CcchHHHHHHHhccCCCC
Q 004157 202 KPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE--LRNT--ASI-------PKSLLPDYQRLLSSMPSR 270 (771)
Q Consensus 202 ~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~--l~~~--~~I-------P~~l~~~i~~lL~~~P~~ 270 (771)
+|||++.+ ..++.++|||||||++|||++|.+++.... ...+ ..+ ......++.+||..+|.+
T Consensus 182 ~APE~~~~------~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P~~ 255 (793)
T PLN00181 182 TSPEEDNG------SSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSC 255 (793)
T ss_pred EChhhhcc------CCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcChhhhhcCHHHHHHHHHhCCCChhh
Confidence 99999876 356789999999999999999887764321 1100 011 123456678899999999
Q ss_pred CCChHHHhhCCCCCc
Q 004157 271 RLNSSKLIENSEYFQ 285 (771)
Q Consensus 271 Rps~~~lL~~~~fF~ 285 (771)
||++.++++|+ ||.
T Consensus 256 Rps~~eil~h~-~~~ 269 (793)
T PLN00181 256 RPSMSELLQSE-FIN 269 (793)
T ss_pred CcChHHHhhch-hhh
Confidence 99999999994 553
No 405
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.84 E-value=4.1e-21 Score=204.70 Aligned_cols=254 Identities=18% Similarity=0.228 Sum_probs=187.9
Q ss_pred CCceecCCCCCCC-CceEEEEeEECC---CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEeccc
Q 004157 19 LPYNIGDPYPSAW-GSWSHFQGTSKD---DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (771)
Q Consensus 19 ~~Y~i~e~ig~G~-g~wtVy~g~~k~---~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~ 93 (771)
..|.+.++||.|+ + +||++++.. .++.|++|.+..... ...+.+|++.|..+. +-||+++.+++...
T Consensus 36 ~~~~~v~kigeGsFs--sv~~a~~~~~~~~~~~valk~i~~ts~----p~ri~~El~~L~~~gG~~ni~~~~~~~rnn-- 107 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFS--SVYKATDIEQDTKRRYVALKAIYRTSS----PSRILNELEMLYRLGGSDNIIKLNGCFRNN-- 107 (418)
T ss_pred hhhhhhccccccchh--hhhhhhHhhhccccceEeeeecccccC----chHHHHHHHHHHHhccchhhhcchhhhccC--
Confidence 4588999999998 8 899999987 688999999986433 345889999999997 89999999999864
Q ss_pred CcCCcccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-CCcEEE
Q 004157 94 DATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-TLDWKL 170 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~-~G~~KL 170 (771)
+...||+||.+ ...+++...+ ...+.|+++.++.||.++|. .|||||||||+|++.+. .+.-.|
T Consensus 108 ------d~v~ivlp~~~H~~f~~l~~~l~------~~~i~~Yl~~ll~Al~~~h~-~GIvHRDiKpsNFL~n~~t~rg~L 174 (418)
T KOG1167|consen 108 ------DQVAIVLPYFEHDRFRDLYRSLS------LAEIRWYLRNLLKALAHLHK-NGIVHRDIKPSNFLYNRRTQRGVL 174 (418)
T ss_pred ------CeeEEEecccCccCHHHHHhcCC------HHHHHHHHHHHHHHhhhhhc-cCccccCCCccccccccccCCceE
Confidence 38999999995 4556655543 23478889999999999996 99999999999999985 578999
Q ss_pred EccCcccccCCCC------------------CC-----------CCC---------CccccccccCCCCCChhccccccc
Q 004157 171 HAFDVLSEFDGNN------------------EA-----------ANG---------PMLQYAWLVGAQYKPVELAKSDWT 212 (771)
Q Consensus 171 ~dFgla~~~~~~~------------------~~-----------~~~---------~~~~~~~~~~~~Y~aPE~~~~~~~ 212 (771)
.|||++...+... .. ..+ +.......++..|+|||++...
T Consensus 175 vDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~-- 252 (418)
T KOG1167|consen 175 VDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRC-- 252 (418)
T ss_pred EechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhc--
Confidence 9999997221100 00 000 0111222344589999999764
Q ss_pred cccCCCCCcchHHHHHHHHHHHhhCCCCCC-h----------------hhhh------------c---------------
Q 004157 213 AVRKSPPWSIDSWGLGCLIYELFSGMRLSK-T----------------EELR------------N--------------- 248 (771)
Q Consensus 213 ~~~~~~~~~~Di~SLG~li~el~~g~~p~~-~----------------~~l~------------~--------------- 248 (771)
...+.++|+||.|+++..++++..||- . ..++ +
T Consensus 253 ---~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~ 329 (418)
T KOG1167|consen 253 ---PRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFE 329 (418)
T ss_pred ---cCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchh
Confidence 456679999999999999999876541 1 0000 0
Q ss_pred ------c--------------CCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCcchhhhhhhhhhhhcc
Q 004157 249 ------T--------------ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQNKLVDTIHFMEILNL 300 (771)
Q Consensus 249 ------~--------------~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~n~lv~~~~~L~~l~~ 300 (771)
+ .-+|..+.+++.+||..||.+|+++++.|+| +||. ..-++...++.+..
T Consensus 330 s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH-pFF~-~~~~~~~~~~~~~~ 399 (418)
T KOG1167|consen 330 TLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH-PFFD-EADRTERGLQDLLQ 399 (418)
T ss_pred ccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC-cCCc-chhhhhhhhHHHhh
Confidence 0 1123467788999999999999999999999 7887 33333444443333
No 406
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.84 E-value=1.3e-21 Score=197.12 Aligned_cols=225 Identities=15% Similarity=0.210 Sum_probs=166.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~ 97 (771)
.|+|.+.+|.|. | .+-.+.++.+++.+++|-+..... ....+.+|++.--.|. |.||+.-|++-...
T Consensus 25 ~y~I~k~lgeG~Fg--kIlL~eHr~s~t~ivlKavp~p~t---t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt------ 93 (378)
T KOG1345|consen 25 VYTINKQLGEGRFG--KILLAEHRQSKTRIVLKAVPRPQT---TQADFVREFHYSFFLSPHQHIIDTYEVAFQT------ 93 (378)
T ss_pred hhhHHHHhccccee--eEEeeeccCCceEEEeeccCcchh---hHHHHHHHhccceeeccchhhhHHHHHHhhc------
Confidence 588999999999 9 999999999999999999986432 3456778988877776 88999988875422
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC--CCcEEEEcc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ--TLDWKLHAF 173 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~--~G~~KL~dF 173 (771)
...+++++||+ ++|...+...+.. +.+.+....|+++||.|+|+ .++||||||.+||+|-. .-.+|||||
T Consensus 94 -~d~YvF~qE~aP~gdL~snv~~~Gig----E~~~K~v~~ql~SAi~fMHs-knlVHRdlK~eNiLif~~df~rvKlcDF 167 (378)
T KOG1345|consen 94 -SDAYVFVQEFAPRGDLRSNVEAAGIG----EANTKKVFAQLLSAIEFMHS-KNLVHRDLKAENILIFDADFYRVKLCDF 167 (378)
T ss_pred -CceEEEeeccCccchhhhhcCccccc----HHHHHHHHHHHHHHHHHhhc-cchhhcccccceEEEecCCccEEEeeec
Confidence 23888999999 7898877765543 23355569999999999996 89999999999999943 346999999
Q ss_pred CcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-------
Q 004157 174 DVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL------- 246 (771)
Q Consensus 174 gla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l------- 246 (771)
|..+..+..-. +..+ ...|.+||++..- ..-+-......|+|.||+++|.+++|..|++....
T Consensus 168 G~t~k~g~tV~-----~~~~----~~~y~~pe~~~~~-~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~ 237 (378)
T KOG1345|consen 168 GLTRKVGTTVK-----YLEY----VNNYHAPELCDTV-VNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWE 237 (378)
T ss_pred ccccccCceeh-----hhhh----hcccCCcHHHhhc-cccceEecccccchheeeeeeeeecCCCcchhhhccCchHHH
Confidence 99887654211 1111 2368888886532 11111234578999999999999999999864322
Q ss_pred ------hccCC-------CCcchHHHHHHHhccCCCCC
Q 004157 247 ------RNTAS-------IPKSLLPDYQRLLSSMPSRR 271 (771)
Q Consensus 247 ------~~~~~-------IP~~l~~~i~~lL~~~P~~R 271 (771)
+.... +.+.+..++++-|...++.|
T Consensus 238 ~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 238 WEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred HHHHhcccCccCchhhcccCHHHHHHHHHhcCCccccc
Confidence 11223 33446666777888888888
No 407
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.80 E-value=2.7e-19 Score=188.03 Aligned_cols=242 Identities=16% Similarity=0.191 Sum_probs=178.7
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCC-----CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEec
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDG-----SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVE 91 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g-----~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e 91 (771)
..++++...+-+|+ | .||.|.+++.. +.|-+|.... .+.+-+...+..|--.|.-+.|||++.+.++...+
T Consensus 283 r~Rv~l~~llqEGtFG--ri~~gI~~eEdt~n~~q~v~vKTvk~-~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~ 359 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFG--RIYRGIWREEDTYNDCQEVLVKTVKQ-HASQIQVNLLLQESMLLYGASHPNLLSVLGVSIED 359 (563)
T ss_pred hhheechhhhhcCchh--heeeeeecccCCcchHHHHHHHHHHh-cccHHHHHHHHHHHHHHhcCcCCCccceeEEEeec
Confidence 34556666667788 8 99999887543 3455555432 34445567788899999999999999999987653
Q ss_pred ccCcCCcccEEEEEecCC--cchHHHHHHhCCCC---CC--cHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC
Q 004157 92 NIDATSTKITIYIVTEPV--MPLSEKIKELGLEG---SQ--RDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ 164 (771)
Q Consensus 92 ~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~---~~--~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~ 164 (771)
. ..-++++.+. +.|..+|....... .+ ....+.....|++.|+++||+ .++||.||-..|.+|++
T Consensus 360 ~-------~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~-~~ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 360 Y-------ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN-HGVIHKDIAARNCVIDD 431 (563)
T ss_pred c-------CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh-cCcccchhhhhcceehh
Confidence 2 2445666665 68999998543211 11 122344558899999999996 99999999999999999
Q ss_pred CCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhh-CCCCCC-
Q 004157 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFS-GMRLSK- 242 (771)
Q Consensus 165 ~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~-g~~p~~- 242 (771)
.-.+||+|=.+++.+-..+... .......|..||++|.+.. ..++.++|+||||+++|||++ |+.|+.
T Consensus 432 ~LqVkltDsaLSRDLFP~DYhc----LGDnEnRPvkWMslEal~n------~~yssasDvWsfGVllWELmtlg~~Pyae 501 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYHC----LGDNENRPVKWMSLEALQN------SHYSSASDVWSFGVLLWELMTLGKLPYAE 501 (563)
T ss_pred heeEEeccchhccccCcccccc----cCCCCCCcccccCHHHHhh------hhhcchhhhHHHHHHHHHHHhcCCCCccc
Confidence 9999999999988765432211 1111123458999999876 478899999999999999998 444432
Q ss_pred ------------hhhhhccCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 243 ------------TEELRNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 243 ------------~~~l~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
...+.+..+.|+++...+.-|+...|++||+.+|+...
T Consensus 502 IDPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~c 551 (563)
T KOG1024|consen 502 IDPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVIC 551 (563)
T ss_pred cCHHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHH
Confidence 22245667899999999999999999999999997643
No 408
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=1.2e-18 Score=191.09 Aligned_cols=168 Identities=11% Similarity=0.057 Sum_probs=122.5
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECC-CCCcEEEEEEeCCCC---chhHHHHHHHHHHHHhcCCCCCeeE-EeeeEEe
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD-DGSPVSIFSISGTNA---QDGHLAAARNGVKRLRTVRHPNILA-FLHSTEV 90 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~-~g~~VaIK~~~~~~~---~~~~~~~~~~ei~~Lk~LrHPnIlk-v~d~~e~ 90 (771)
....|++++.||.|+ | +||+|.++. +++.|+||++..... .+.....+++|+++|++|+|+||+. +++.
T Consensus 16 ~~~~Y~~~~~IG~G~fg--~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 16 LSARFVETAVLKRDVFS--TVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccCCceEccEEeecCcE--EEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 345799999999998 8 999999886 677889998763311 2334567899999999999999985 4432
Q ss_pred cccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCC-CCCCEEEcCCCc
Q 004157 91 ENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV-CLSSVVVTQTLD 167 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dI-kp~NI~v~~~G~ 167 (771)
+ ..||||||| ++|.. +.. . ... ..+.|++++|.|||+ .+++|||| ||+||+++.+|.
T Consensus 91 -~--------~~~LVmE~~~G~~L~~-~~~---~--~~~----~~~~~i~~aL~~lH~-~gIiHrDL~KP~NILv~~~~~ 150 (365)
T PRK09188 91 -G--------KDGLVRGWTEGVPLHL-ARP---H--GDP----AWFRSAHRALRDLHR-AGITHNDLAKPQNWLMGPDGE 150 (365)
T ss_pred -C--------CcEEEEEccCCCCHHH-hCc---c--chH----HHHHHHHHHHHHHHH-CCCeeCCCCCcceEEEcCCCC
Confidence 1 469999999 35652 211 0 111 227899999999996 89999999 999999999999
Q ss_pred EEEEccCcccccCCCCCCCCCCccccc----cccCCCCCChhcccccc
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYA----WLVGAQYKPVELAKSDW 211 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~----~~~~~~Y~aPE~~~~~~ 211 (771)
+||+|||+++.+..... ...+..+. ......|.+||++....
T Consensus 151 ikLiDFGlA~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~pe~~~~~~ 196 (365)
T PRK09188 151 AAVIDFQLASVFRRRGA--LYRIAAYEDLRHLLKHKRTYAPDALTPRE 196 (365)
T ss_pred EEEEECccceecccCcc--hhhhhhhhhhhhhhccCccCCcccCChhh
Confidence 99999999987754321 11221111 12233789999887543
No 409
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=7e-19 Score=204.87 Aligned_cols=245 Identities=17% Similarity=0.169 Sum_probs=177.4
Q ss_pred CCc-eecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC---CCch-hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecc
Q 004157 19 LPY-NIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT---NAQD-GHLAAARNGVKRLRTVRHPNILAFLHSTEVEN 92 (771)
Q Consensus 19 ~~Y-~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~---~~~~-~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~ 92 (771)
-+| ..+..+|.|. | .|+...+....+....|.+... ...+ .....+..|+-+-.+|+||||+..++.+..-.
T Consensus 317 ~~y~~~~~~~g~ga~g--~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~ 394 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYG--SVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID 394 (601)
T ss_pred cccCCccceeeecccC--ceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc
Confidence 346 3344566676 6 6888888877777777766421 1111 22223667888888999999988888776532
Q ss_pred cCcCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 93 IDATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
.++-+|||| .+|...+....+..... +-..+.|++.||+|||. .|+.|||||++|++++.+|.+||+
T Consensus 395 --------~~~~~mE~~~~Dlf~~~~~~~~~~~~e---~~c~fKqL~~Gv~y~h~-~GiahrdlK~enll~~~~g~lki~ 462 (601)
T KOG0590|consen 395 --------GILQSMEYCPYDLFSLVMSNGKLTPLE---ADCFFKQLLRGVKYLHS-MGLAHRDLKLENLLVTENGILKII 462 (601)
T ss_pred --------cchhhhhcccHHHHHHHhcccccchhh---hhHHHHHHHHHHHHHHh-cCceeccCccccEEEecCCceEEe
Confidence 344459999 46888887763322222 33449999999999996 999999999999999999999999
Q ss_pred ccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhh----
Q 004157 172 AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELR---- 247 (771)
Q Consensus 172 dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~---- 247 (771)
|||.+..+.-..... .....+.++...|+|||++.+. ...+..+|+||.|++++.|.+|+.||......
T Consensus 463 Dfg~~~vf~~~~e~~--~~~~~g~~gS~pY~apE~~~~~-----~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~ 535 (601)
T KOG0590|consen 463 DFGAASVFRYPWEKN--IHESSGIVGSDPYLAPEVLTGK-----EYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF 535 (601)
T ss_pred ecCcceeeccCcchh--hhhhcCcccCCcCcCccccccc-----ccCcchhhhhhccceEEEEecCCCccccccccccch
Confidence 999987665432211 1223445566799999998874 34557899999999999999998877432111
Q ss_pred -----------------ccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 248 -----------------NTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 248 -----------------~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
-...+|...+.++.+||+.+|.+|.+++++++. +||+
T Consensus 536 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d-~W~~ 589 (601)
T KOG0590|consen 536 KTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND-EWIR 589 (601)
T ss_pred hhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC-hHhh
Confidence 113467888889999999999999999999987 5554
No 410
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.74 E-value=1.2e-17 Score=165.00 Aligned_cols=144 Identities=17% Similarity=0.111 Sum_probs=109.8
Q ss_pred cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCC
Q 004157 110 MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGP 189 (771)
Q Consensus 110 ~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~ 189 (771)
++|.++++..+. ......+..+++||+.||.|||+ .+ ||+||+++.+|.+|+ ||++.......
T Consensus 1 GsL~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~lH~-~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~------ 63 (176)
T smart00750 1 VSLADILEVRGR--PLNEEEIWAVCLQCLRALRELHR-QA------KSGNILLTWDGLLKL--DGSVAFKTPEQ------ 63 (176)
T ss_pred CcHHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHh-cC------CcccEeEcCccceee--ccceEeecccc------
Confidence 468888876432 12344567779999999999997 44 999999999999999 99887654321
Q ss_pred ccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhh-----hhc----c-----------
Q 004157 190 MLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEE-----LRN----T----------- 249 (771)
Q Consensus 190 ~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~-----l~~----~----------- 249 (771)
..++..|+|||++.+ ..++.++|||||||++|||++|..|+.... +.. .
T Consensus 64 -----~~g~~~y~aPE~~~~------~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (176)
T smart00750 64 -----SRVDPYFMAPEVIQG------QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNL 132 (176)
T ss_pred -----CCCcccccChHHhcC------CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccH
Confidence 134568999999976 356789999999999999999998875321 100 0
Q ss_pred CCCCc--chHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 250 ASIPK--SLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 250 ~~IP~--~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
..++. .+.+++.+||..+|.+||++.++++|.
T Consensus 133 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~ 166 (176)
T smart00750 133 ESVSAARSFADFMRVCASRLPQRREAANHYLAHC 166 (176)
T ss_pred HHHHhhhhHHHHHHHHHhcccccccCHHHHHHHH
Confidence 11222 588899999999999999999999883
No 411
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.72 E-value=2.4e-17 Score=173.83 Aligned_cols=240 Identities=15% Similarity=0.150 Sum_probs=146.5
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC-chhHHHHHHHHHHHHhcCC----------CCCeeEEeee
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA-QDGHLAAARNGVKRLRTVR----------HPNILAFLHS 87 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~-~~~~~~~~~~ei~~Lk~Lr----------HPnIlkv~d~ 87 (771)
.+..++.||.|. + .||.+++.++|++++||++..... .....+.+++|.-....+. |-.++..+|.
T Consensus 13 ~l~~~~~i~~g~~~--~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~ 90 (288)
T PF14531_consen 13 TLVRGRIIGKGGFS--IVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDL 90 (288)
T ss_dssp EEEEEEEEEEETTE--EEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEE
T ss_pred EEEEccccccCCce--EEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEE
Confidence 456677888886 6 899999999999999999986432 2234666666665554432 2244444554
Q ss_pred EEecccCc------CCccc---EEEEEecCC-cchHHHHHH---hCCCCCCcHHHH-HHHHHHHHHHHHHHHcCCCceec
Q 004157 88 TEVENIDA------TSTKI---TIYIVTEPV-MPLSEKIKE---LGLEGSQRDEYY-AWGLNQIAKAVSFLNNDCKLVHG 153 (771)
Q Consensus 88 ~e~e~~d~------~~~~~---~iyIVtE~v-~~L~~~L~~---~~~~~~~~~~~i-~~gl~QI~~aL~fLH~~~~ivH~ 153 (771)
....+... +.+.. +.+++|+.+ .+|.+++.. ............ .....|+++.+++||. .|+||+
T Consensus 91 ~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~-~GlVHg 169 (288)
T PF14531_consen 91 LRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS-YGLVHG 169 (288)
T ss_dssp EEETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH-TTEEES
T ss_pred EEEcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh-cceEec
Confidence 44321000 00011 236677776 567766543 322211111112 2224899999999997 899999
Q ss_pred CCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccc--cccccCCCCCcchHHHHHHHH
Q 004157 154 NVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSD--WTAVRKSPPWSIDSWGLGCLI 231 (771)
Q Consensus 154 dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~--~~~~~~~~~~~~Di~SLG~li 231 (771)
||+|+|+|++.+|.++|+||+.+...+.. + .. ...+..|.|||..... +....-.++.+.|.|+||++|
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~-------~-~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~l 240 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTR-------Y-RC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITL 240 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEE-------E-EG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCce-------e-ec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHH
Confidence 99999999999999999999988766541 1 11 2334579999987542 000112356789999999999
Q ss_pred HHHhhCCCCCChh--------hhhccCCCCcchHHHHHHHhccCCCCC
Q 004157 232 YELFSGMRLSKTE--------ELRNTASIPKSLLPDYQRLLSSMPSRR 271 (771)
Q Consensus 232 ~el~~g~~p~~~~--------~l~~~~~IP~~l~~~i~~lL~~~P~~R 271 (771)
|.|+++.-||... ......++|+.+..+|++||+.||.+|
T Consensus 241 y~lWC~~lPf~~~~~~~~~~~~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 241 YSLWCGRLPFGLSSPEADPEWDFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHSS-STCCCGGGSTSGGGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHccCCCCCCCccccccccchhcCCcCHHHHHHHHHHccCCcccC
Confidence 9999999887521 344456899999999999999999887
No 412
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.72 E-value=4.8e-16 Score=164.31 Aligned_cols=243 Identities=20% Similarity=0.281 Sum_probs=177.4
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchh-HHHHHHHHHHHHhcCCCC-CeeEEeeeEEecccCcCC
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDG-HLAAARNGVKRLRTVRHP-NILAFLHSTEVENIDATS 97 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~-~~~~~~~ei~~Lk~LrHP-nIlkv~d~~e~e~~d~~~ 97 (771)
|.+.+.+|.|. | .||.+.+. ..+++|.+........ ....+.+|++.++.+.|+ +|+++++.+...
T Consensus 2 ~~~~~~l~~g~~~--~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~------ 70 (384)
T COG0515 2 YRILRKLGEGSFG--EVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDE------ 70 (384)
T ss_pred ceeEEeecCCCCe--EEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecC------
Confidence 77888899777 7 89999987 8899999987654442 567888999999999988 799999999543
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-cEEEEccC
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-DWKLHAFD 174 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G-~~KL~dFg 174 (771)
...++++|++ ..|.+++................++.|++.+|.|+|. .+++||||||+||+++..+ ..++.|||
T Consensus 71 --~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~-~~~~hrd~kp~nil~~~~~~~~~l~dfg 147 (384)
T COG0515 71 --GSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS-KGIIHRDIKPENILLDRDGRVVKLIDFG 147 (384)
T ss_pred --CEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh-CCeeccCCCHHHeeecCCCCeEEEeccC
Confidence 3589999999 3566666554311112334456669999999999996 8999999999999999998 79999999
Q ss_pred cccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh--------
Q 004157 175 VLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-------- 246 (771)
Q Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-------- 246 (771)
.+....................+...|++||...+.- ........|+|++|+++++++.|..|+.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~---~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~ 224 (384)
T COG0515 148 LAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLS---LAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTL 224 (384)
T ss_pred cceecCCCCccccccccccccccccccCCHHHhcCCC---CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHH
Confidence 9985544221110000122334556899999987520 02456789999999999999999877643321
Q ss_pred hc---------cCCCC--------cchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 247 RN---------TASIP--------KSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 247 ~~---------~~~IP--------~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
.. ...+. ..+.+++.+++..+|..|.+......+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 225 KIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00 01111 246788889999999999998776554
No 413
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.71 E-value=1.4e-16 Score=165.13 Aligned_cols=205 Identities=13% Similarity=0.146 Sum_probs=166.8
Q ss_pred CCCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEeccc
Q 004157 16 VKDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (771)
Q Consensus 16 ~~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~ 93 (771)
+....|.+|++||+|. | .++.|++.-+|++||||.-..+ ....+++.|.+..|.|- .++|..+|.+-..
T Consensus 25 ~VG~hyrVGkKIGeGsFG--~lf~G~Nl~nne~VAIKfEPrk----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqe--- 95 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFG--VLFLGKNLYNNEPVAIKFEPRK----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQE--- 95 (449)
T ss_pred EecccceeccccccCcce--eeecccccccCceEEEEecccc----CCcchHHHHHHHHHHHcCCCCCCceeeeccc---
Confidence 4456899999999999 9 9999999999999999986544 33567888999999986 7899999876654
Q ss_pred CcCCcccEEEEEecCCcc-hHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-----c
Q 004157 94 DATSTKITIYIVTEPVMP-LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-----D 167 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v~~-L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G-----~ 167 (771)
+.+-.+|+|..+| |.+++.-++.. .....+..+..|++.-++++|+ ..+|.|||||+|.+|..-| .
T Consensus 96 -----G~~NiLVidLLGPSLEDLFD~CgR~--FSvKTV~miA~Qmi~rie~vH~-k~LIYRDIKPdNFLIGrp~~k~~n~ 167 (449)
T KOG1165|consen 96 -----GKYNILVIDLLGPSLEDLFDLCGRR--FSVKTVAMIAKQMITRIEYVHE-KDLIYRDIKPDNFLIGRPGTKDANV 167 (449)
T ss_pred -----cchhhhhhhhhCcCHHHHHHHhcCc--ccHHhHHHHHHHHHHHHHHHHh-cceeecccCccceeecCCCCCCCce
Confidence 4466899999975 77777665432 2345567779999999999996 8999999999999997544 3
Q ss_pred EEEEccCcccccCCCCCCCCCCccccccccCC-CCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLVGA-QYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT 243 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~-~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~ 243 (771)
+.++|||++..+.+.......|+.....+.|+ +||+-....+ +..+...|+=+||.++.+.+-|..||+.
T Consensus 168 IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlG------rEQSRRDDLEaLGHvFmYFLRGsLPWQG 238 (449)
T KOG1165|consen 168 IHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLG------REQSRRDDLEALGHVFMYFLRGSLPWQG 238 (449)
T ss_pred EEEEeccchhhhcCccccccCccccccccccceeeeEeecccc------chhhhhhhHHHhhhhhhhhccCCCcccc
Confidence 99999999999988766666677777677666 9998777666 4566789999999999999999888753
No 414
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.70 E-value=7.1e-16 Score=168.27 Aligned_cols=203 Identities=14% Similarity=0.106 Sum_probs=153.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCC-CcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCC----CCeeEEeeeEE-ecc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDG-SPVSIFSISGTNAQDGHLAAARNGVKRLRTVRH----PNILAFLHSTE-VEN 92 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g-~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrH----PnIlkv~d~~e-~e~ 92 (771)
.|+++++||.|+ | .||.+.+..++ ..+++|+......... ..++.|..+++.+.+ +++..+++... .
T Consensus 19 ~~~i~~~iG~G~fG--~V~~v~~~~~~~~~~a~K~e~~~~~~~~--~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~-- 92 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFG--AVYLVSDKSEKNKEYAKKLEKKELGSKP--SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRST-- 92 (322)
T ss_pred ceEEeeeccccCCc--eEEEEEecCCCCeeEEEEEEEecccCCC--ccchhHHHHHHHHhhhcCCCCCCEEEEeccCC--
Confidence 899999999998 9 99999998775 5788888765322221 157788999998873 58999998884 3
Q ss_pred cCcCCcccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-----
Q 004157 93 IDATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL----- 166 (771)
Q Consensus 93 ~d~~~~~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G----- 166 (771)
..+-||||+.++ +|.++.+... ........+..+..|++.+|++||+ .|++||||||+|+.+...+
T Consensus 93 ------~~~~~iVM~l~G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~-~G~iHRDiKp~N~~~g~~~~~~~~ 164 (322)
T KOG1164|consen 93 ------EDFNFIVMSLLGPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHS-KGFIHRDIKPENFVVGQSSRSEVR 164 (322)
T ss_pred ------CceeEEEEeccCccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHh-cCcccCCcCHHHeeecCCCCcccc
Confidence 347799999996 5888776655 3334445566668999999999996 9999999999999998653
Q ss_pred cEEEEccCccc--ccCCCCCCCCCCcc--ccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCC
Q 004157 167 DWKLHAFDVLS--EFDGNNEAANGPML--QYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242 (771)
Q Consensus 167 ~~KL~dFgla~--~~~~~~~~~~~~~~--~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~ 242 (771)
.+.|.|||+++ .+.........+.. ...+.++.+|.++....+ ...+...|+||++.++.+++.|..|+.
T Consensus 165 ~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~------~e~~r~DDles~~Y~l~el~~g~LPW~ 238 (322)
T KOG1164|consen 165 TLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG------IEQGRRDDLESLFYMLLELLKGSLPWE 238 (322)
T ss_pred eEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCC------CccCCchhhhhHHHHHHHHhcCCCCCc
Confidence 59999999999 43322211101111 123445669999998877 467789999999999999999976663
No 415
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.66 E-value=2.3e-16 Score=158.86 Aligned_cols=139 Identities=12% Similarity=0.084 Sum_probs=100.7
Q ss_pred cCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchh------------------------HHHHHHHHHHHHhcCCC
Q 004157 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDG------------------------HLAAARNGVKRLRTVRH 78 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~------------------------~~~~~~~ei~~Lk~LrH 78 (771)
.+.||.|+ | +||.|++. +|++|+||++........ ......+|++.|++|.|
T Consensus 2 ~~~ig~G~~~--~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 78 (190)
T cd05147 2 NGCISTGKEA--NVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVT 78 (190)
T ss_pred CCccccccce--EEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46789998 8 99999987 899999999976422110 01234569999999998
Q ss_pred CCeeEEeeeEEecccCcCCcccEEEEEecCCc--chHHH-HHHhCCCCCCcHHHHHHHHHHHHHHHHHH-HcCCCceecC
Q 004157 79 PNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEK-IKELGLEGSQRDEYYAWGLNQIAKAVSFL-NNDCKLVHGN 154 (771)
Q Consensus 79 PnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v~--~L~~~-L~~~~~~~~~~~~~i~~gl~QI~~aL~fL-H~~~~ivH~d 154 (771)
++|...... +.. ..|||||||+ .|... ++... .....+...+.|++.+|.+| |. ++++|||
T Consensus 79 ~~v~~p~~~-~~~---------~~~iVmE~i~g~~l~~~~~~~~~----~~~~~~~~i~~qi~~~L~~l~H~-~giiHrD 143 (190)
T cd05147 79 AGIPCPEPI-LLK---------SHVLVMEFIGDDGWAAPRLKDAP----LSESKARELYLQVIQIMRILYQD-CRLVHAD 143 (190)
T ss_pred CCCCCCcEE-Eec---------CCEEEEEEeCCCCCcchhhhcCC----CCHHHHHHHHHHHHHHHHHHHHh-CCcccCC
Confidence 887443322 221 2389999994 34333 33222 22344566699999999999 65 8999999
Q ss_pred CCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 155 VCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 155 Ikp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
|||+||+++ +|.++|+|||++.....
T Consensus 144 lkP~NIli~-~~~v~LiDFG~a~~~~~ 169 (190)
T cd05147 144 LSEYNLLYH-DGKLYIIDVSQSVEHDH 169 (190)
T ss_pred CCHHHEEEE-CCcEEEEEccccccCCC
Confidence 999999998 58899999999976543
No 416
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.66 E-value=2.8e-16 Score=161.22 Aligned_cols=178 Identities=8% Similarity=0.012 Sum_probs=126.9
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHHH------HHHHHHHHhcCCCCCeeEEeeeE
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLAA------ARNGVKRLRTVRHPNILAFLHST 88 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~~------~~~ei~~Lk~LrHPnIlkv~d~~ 88 (771)
-+.+|.+.+.++.|+ | .||.... ++..|+||++..+.... ..... +++|++.+.+|+||||..+.+++
T Consensus 29 l~~~y~~~~~l~~~~f~--~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~ 104 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDT--KVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY 104 (232)
T ss_pred hhCceEEEEEecCCCce--EEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence 356899999999887 8 8998654 47789999998654333 22223 67999999999999999999997
Q ss_pred EecccCcCCcccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC
Q 004157 89 EVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL 166 (771)
Q Consensus 89 e~e~~d~~~~~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G 166 (771)
+.............|||||||. +|.+... ..... +.+|+.+|..||. .|++|||++|+||+++.+|
T Consensus 105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~~~----~~~i~~~l~~lH~-~gi~H~Dikp~Nili~~~g 172 (232)
T PRK10359 105 LLAERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISEDV----KAKIKASIESLHQ-HGMVSGDPHKGNFIVSKNG 172 (232)
T ss_pred eecccccccccCCeEEEEEEECCccHHHhhh-------ccHHH----HHHHHHHHHHHHH-cCCccCCCChHHEEEeCCC
Confidence 7543210000135799999993 5766521 11222 6799999999996 8999999999999999999
Q ss_pred cEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHh
Q 004157 167 DWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELF 235 (771)
Q Consensus 167 ~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~ 235 (771)
++|+|||........... . . +.. ...+..++|+|+||+.+.-+.
T Consensus 173 -i~liDfg~~~~~~e~~a~---d----------~-----~vl------er~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 -LRIIDLSGKRCTAQRKAK---D----------R-----IDL------ERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred -EEEEECCCcccccchhhH---H----------H-----HHH------HhHhcccccccceeEeehHHH
Confidence 999999988765431100 0 0 111 123446899999998765443
No 417
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.64 E-value=9.6e-16 Score=154.36 Aligned_cols=141 Identities=13% Similarity=0.105 Sum_probs=104.4
Q ss_pred ecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------------------------hHHHHHHHHHHHHhcCC
Q 004157 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------------------------GHLAAARNGVKRLRTVR 77 (771)
Q Consensus 23 i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~------------------------~~~~~~~~ei~~Lk~Lr 77 (771)
|.+.||.|+ | +||+|++. +|+.|+||++....... .....+++|++.+.+++
T Consensus 1 ~~~~ig~G~~~--~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 77 (190)
T cd05145 1 INGCISTGKEA--NVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY 77 (190)
T ss_pred CCceeecCCCc--EEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 356788888 8 99999987 89999999998652110 01233468999999999
Q ss_pred CCCeeEEeeeEEecccCcCCcccEEEEEecCCcc--hH-HHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecC
Q 004157 78 HPNILAFLHSTEVENIDATSTKITIYIVTEPVMP--LS-EKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (771)
Q Consensus 78 HPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v~~--L~-~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (771)
|++|......... ..||||||+.. +. ..+..... .......++.|++.+|.+||...|++|||
T Consensus 78 ~~~i~~p~~~~~~----------~~~lVmE~~~g~~~~~~~l~~~~~----~~~~~~~i~~~l~~~l~~lH~~~givHrD 143 (190)
T cd05145 78 EAGVPVPEPILLK----------KNVLVMEFIGDDGSPAPRLKDVPL----EEEEAEELYEQVVEQMRRLYQEAGLVHGD 143 (190)
T ss_pred hCCCCCceEEEec----------CCEEEEEEecCCCchhhhhhhccC----CHHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence 9987544443322 23899999942 32 33443322 22334556899999999999648999999
Q ss_pred CCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 155 VCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 155 Ikp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
|||+||+++ +|.++|+|||++.....
T Consensus 144 lkP~NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 144 LSEYNILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred CChhhEEEE-CCCEEEEEcccceecCC
Confidence 999999998 89999999999987654
No 418
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.59 E-value=3.8e-15 Score=148.47 Aligned_cols=203 Identities=14% Similarity=0.099 Sum_probs=150.1
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCC-CCeeEEeeeEEecccC
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRH-PNILAFLHSTEVENID 94 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrH-PnIlkv~d~~e~e~~d 94 (771)
..-+|.+.++||+|+ | .+|.|....+|+.||||+-..+. . ...+..|.++.+.|+| ++|..+..+..+.
T Consensus 13 v~gky~lvrkiGsGSFG--dIy~~~~i~~ge~VAiK~Es~~a-~---hpqL~yEskvY~iL~~g~GiP~i~~y~~e~--- 83 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFG--DIYLGISITSGEEVAIKLESSKA-K---HPQLLYESKVYRILQGGVGIPHIRHYGTEK--- 83 (341)
T ss_pred eccceEEEEeecCCchh--heeeeeeccCCceEEEEeecccC-C---CcchhHHHHHHHHhccCCCCchhhhhcccc---
Confidence 345799999999999 9 99999999999999999966432 2 2356678999999984 5677777766553
Q ss_pred cCCcccEEEEEecCCcc-hHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC---CCcEEE
Q 004157 95 ATSTKITIYIVTEPVMP-LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ---TLDWKL 170 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v~~-L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~---~G~~KL 170 (771)
.+-.+||+..+| |.+++.-.... .....+....-|++.-++|+|. .++|||||||+|.+..- ...+.|
T Consensus 84 -----~ynvlVMdLLGPsLEdLfnfC~R~--ftmkTvLMLaDQml~RiEyvH~-r~fiHRDIKPdNFLMGlgrh~~kl~L 155 (341)
T KOG1163|consen 84 -----DYNVLVMDLLGPSLEDLFNFCSRR--FTMKTVLMLADQMLSRIEYVHL-RNFIHRDIKPDNFLMGLGRHCNKLYL 155 (341)
T ss_pred -----ccceeeeeccCccHHHHHHHHhhh--hhHHhHHHHHHHHHHHHHHHHh-hccccccCCccceeeccccccceEEE
Confidence 366999999975 66666543321 1223344557899999999996 89999999999999863 355899
Q ss_pred EccCcccccCCCCCCCCCCccccccccC-CCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCC
Q 004157 171 HAFDVLSEFDGNNEAANGPMLQYAWLVG-AQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSK 242 (771)
Q Consensus 171 ~dFgla~~~~~~~~~~~~~~~~~~~~~~-~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~ 242 (771)
+|||++..+.+.......|+..-..+.| .+|.+-....+ ...+...|+=|+|.++.++--|.-||+
T Consensus 156 IDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g------~eqSRRDDmeSvgYvLmYfnrG~LPWQ 222 (341)
T KOG1163|consen 156 IDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLG------IEQSRRDDMESVGYVLMYFNRGSLPWQ 222 (341)
T ss_pred EeccchhhhccccccccCccccCCccceeeeehhhhhhhh------hhhhhhhhhhhhcceeeeeecCCCccc
Confidence 9999999887755544445554433334 48877655443 234567899999988877777777765
No 419
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.57 E-value=1.2e-14 Score=153.83 Aligned_cols=192 Identities=18% Similarity=0.166 Sum_probs=131.8
Q ss_pred CCCCeeEEeeeEEecccC-------------------cCCcccEEEEEecCC-cchHHHHHHhCCCCCCcHHHHHHHHHH
Q 004157 77 RHPNILAFLHSTEVENID-------------------ATSTKITIYIVTEPV-MPLSEKIKELGLEGSQRDEYYAWGLNQ 136 (771)
Q Consensus 77 rHPnIlkv~d~~e~e~~d-------------------~~~~~~~iyIVtE~v-~~L~~~L~~~~~~~~~~~~~i~~gl~Q 136 (771)
+||||+.+...|.++-+. |-+.+.++|+||.++ .+|..+|-.+...... -..++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~~s~r~----~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRHRSYRT----GRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCCCchHH----HHHHHHH
Confidence 699999999888653321 113467999999999 6899998776543221 2233899
Q ss_pred HHHHHHHHHcCCCceecCCCCCCEEEcCC----CcEEEEccCcccccCCCCCCCCCCcccc-ccccCC-CCCChhccccc
Q 004157 137 IAKAVSFLNNDCKLVHGNVCLSSVVVTQT----LDWKLHAFDVLSEFDGNNEAANGPMLQY-AWLVGA-QYKPVELAKSD 210 (771)
Q Consensus 137 I~~aL~fLH~~~~ivH~dIkp~NI~v~~~----G~~KL~dFgla~~~~~~~~~~~~~~~~~-~~~~~~-~Y~aPE~~~~~ 210 (771)
+++|+.|||. .|+.|||+|.+||++.-+ -...++|||+|---+.- .-.-++... -..+|. ..||||+...-
T Consensus 350 lLEav~hL~~-hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~h--Glqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 350 LLEAVTHLHK-HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNH--GLQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHHHH-ccchhhcccccceEEEecCCCCcEEEEcccceeeecccc--ccccccccccccCCCcceecchhhhhcC
Confidence 9999999996 999999999999999533 23789999998533221 111122221 123343 67999997531
Q ss_pred cccccCCCCCcchHHHHHHHHHHHhhCCCCCChh----------hhhcc----CCCCcchHHHHHHHhccCCCCCCChH
Q 004157 211 WTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE----------ELRNT----ASIPKSLLPDYQRLLSSMPSRRLNSS 275 (771)
Q Consensus 211 ~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~----------~l~~~----~~IP~~l~~~i~~lL~~~P~~Rps~~ 275 (771)
-.....-.-.++|.|+.|.|.||+|....||-.. +..++ ..+|..+++++..+|+.+|++|+++.
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 0000001124799999999999999988776331 11122 45777889999999999999999964
No 420
>PRK10345 hypothetical protein; Provisional
Probab=99.56 E-value=3e-14 Score=145.35 Aligned_cols=135 Identities=12% Similarity=0.112 Sum_probs=101.4
Q ss_pred cCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcC-----CCCCeeEEeeeEEecccCcCC
Q 004157 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTV-----RHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~L-----rHPnIlkv~d~~e~e~~d~~~ 97 (771)
.+.||.|+ | .||. ++.++.. +||++..... ...+.+++|++.++.| .||||++++++++++.+.
T Consensus 7 ~~~LG~G~~~--~Vy~--hp~~~~k-~IKv~~~~~~--~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~--- 76 (210)
T PRK10345 7 QSPLGTGRHR--KCYA--HPEDAQR-CIKIVYHRGD--GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGT--- 76 (210)
T ss_pred cceecCCCce--EEEE--CCCCcCe-EEEEEecccc--chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCC---
Confidence 45789998 7 8995 6777766 5999876432 2345689999999999 579999999999986432
Q ss_pred cccEEEEEecCC----cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHH-HHHHcCCCceecCCCCCCEEEcCC----CcE
Q 004157 98 TKITIYIVTEPV----MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAV-SFLNNDCKLVHGNVCLSSVVVTQT----LDW 168 (771)
Q Consensus 98 ~~~~iyIVtE~v----~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL-~fLH~~~~ivH~dIkp~NI~v~~~----G~~ 168 (771)
+..+.+|+||+ ++|.+++++..+. .. . ..+.|++.++ +|||+ .+|+||||||+||+++.. +.+
T Consensus 77 -g~v~~~I~e~~G~~~~tL~~~l~~~~~~----e~-~-~~~~~~L~~l~~yLh~-~~IvhrDlKp~NILl~~~~~~~~~~ 148 (210)
T PRK10345 77 -GYVYDVIADFDGKPSITLTEFAEQCRYE----ED-V-AQLRQLLKKLKRYLLD-NRIVTMELKPQNILCQRISESEVIP 148 (210)
T ss_pred -eEEEEEEecCCCCcchhHHHHHHccccc----Hh-H-HHHHHHHHHHHHHHHH-CCEeecCCCHHHEEEeccCCCCCcE
Confidence 12234899995 3799999764321 11 1 2278888888 89996 999999999999999743 379
Q ss_pred EEEccCcc
Q 004157 169 KLHAFDVL 176 (771)
Q Consensus 169 KL~dFgla 176 (771)
+|+||+-+
T Consensus 149 ~LiDg~G~ 156 (210)
T PRK10345 149 VVCDNIGE 156 (210)
T ss_pred EEEECCCC
Confidence 99995544
No 421
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.56 E-value=2.6e-14 Score=143.93 Aligned_cols=191 Identities=12% Similarity=0.039 Sum_probs=129.4
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc--hhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ--DGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDA 95 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~--~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~ 95 (771)
++.+...++.|. | +||.+.. .+.+|+.+.+.....- .-....+++|+++|++|. |++|.+++++.
T Consensus 3 ~~~~~~~l~~~~f~--~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~------- 71 (218)
T PRK12274 3 PPAVNEPLKSDTFG--RILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD------- 71 (218)
T ss_pred CcccceeecCCCcc--eEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc-------
Confidence 455677888887 8 9997765 6888888887653221 111236889999999996 57899998852
Q ss_pred CCcccEEEEEecCC-c-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCC-CCCCEEEcCCCcEEEEc
Q 004157 96 TSTKITIYIVTEPV-M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV-CLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dI-kp~NI~v~~~G~~KL~d 172 (771)
..|++|||+ + +|...+... .. ..+.|++.+|.+||. .|++|||| ||+||+++.+|.++|+|
T Consensus 72 -----~~~lvmeyI~G~~L~~~~~~~------~~----~~~~qi~~~L~~lH~-~GIvHrDL~kp~NILv~~~g~i~LID 135 (218)
T PRK12274 72 -----GRHLDRSYLAGAAMYQRPPRG------DL----AYFRAARRLLQQLHR-CGVAHNDLAKEANWLVQEDGSPAVID 135 (218)
T ss_pred -----CEEEEEeeecCccHHhhhhhh------hH----HHHHHHHHHHHHHHH-CcCccCCCCCcceEEEcCCCCEEEEE
Confidence 359999998 3 565433211 11 237899999999996 99999999 79999999999999999
Q ss_pred cCcccccCCCCCC----CCC---CccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCC
Q 004157 173 FDVLSEFDGNNEA----ANG---PMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS 241 (771)
Q Consensus 173 Fgla~~~~~~~~~----~~~---~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~ 241 (771)
||++......... ... .+..+-......|+.|+...-- ....-...+.++.|+-+|.+++++-++
T Consensus 136 FG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l----~~~~~~~~~w~~~g~~~~~~~~~~~~~ 207 (218)
T PRK12274 136 FQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVL----KRTSWIRELWFATGKPVYRFVTRRVLH 207 (218)
T ss_pred CCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhh----ccchhHHHHHHHhcchHHHHHhccCCc
Confidence 9999855432110 000 0001111123456666654321 111114678899999999999988654
No 422
>smart00090 RIO RIO-like kinase.
Probab=99.53 E-value=1.9e-14 Score=149.85 Aligned_cols=145 Identities=12% Similarity=0.009 Sum_probs=104.8
Q ss_pred CceecCCCCCCC-CceEEEEeE-ECCCCCcEEEEEEeCCCCch----------------------hHHHHHHHHHHHHhc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGT-SKDDGSPVSIFSISGTNAQD----------------------GHLAAARNGVKRLRT 75 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~-~k~~g~~VaIK~~~~~~~~~----------------------~~~~~~~~ei~~Lk~ 75 (771)
-|.+.+.||.|+ | .||.|+ +..+|+.|+||++....... .....+++|++.+++
T Consensus 29 ~~~i~~~Lg~G~~g--~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~ 106 (237)
T smart00090 29 LSAIGGCISTGKEA--NVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR 106 (237)
T ss_pred hHHhCCeeccCcce--eEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 389999999998 8 999999 66789999999998543110 012346789999999
Q ss_pred CCCCCeeEEeeeEEecccCcCCcccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC-cee
Q 004157 76 VRHPNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK-LVH 152 (771)
Q Consensus 76 LrHPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~-ivH 152 (771)
|.+. ++.+...+... ..||||||+. +|...+..... .....+..++.||+.+|.+||. .+ ++|
T Consensus 107 L~~~-~i~~p~~~~~~---------~~~lV~E~~~g~~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~LH~-~g~iiH 172 (237)
T smart00090 107 LYEA-GVPVPKPIAWR---------RNVLVMEFIGGDGLPAPRLKDVE---PEEEEEFELYDDILEEMRKLYK-EGELVH 172 (237)
T ss_pred HHhc-CCCCCeeeEec---------CceEEEEEecCCcccccccccCC---cchHHHHHHHHHHHHHHHHHHh-cCCEEe
Confidence 9763 33333333321 2489999994 35443322111 1122234558999999999996 88 999
Q ss_pred cCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 153 GNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 153 ~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
|||||+||+++ ++.++|+|||.+.....
T Consensus 173 ~Dikp~NIli~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 173 GDLSEYNILVH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred CCCChhhEEEE-CCCEEEEEChhhhccCC
Confidence 99999999999 88999999999875543
No 423
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.50 E-value=9.1e-15 Score=160.87 Aligned_cols=167 Identities=19% Similarity=0.241 Sum_probs=123.2
Q ss_pred cEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 100 ~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
.++||.|+.| ..|.++|..+........-.++..+.|++.++.| .+.+|+|+||.|||...++..||+|||+.+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y----k~~ihrdlkp~nif~~~d~q~kIgDFgl~t 404 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY----KGLIHRDLKPSNIFFSDDDQLKIGDFGLVT 404 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh----ccchhhhccccccccccchhhhhhhhhhee
Confidence 3789999999 5799999876654444444456669999999999 689999999999999999999999999998
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhC--CCCCChhhhhc--cCCCC
Q 004157 178 EFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSG--MRLSKTEELRN--TASIP 253 (771)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g--~~p~~~~~l~~--~~~IP 253 (771)
............-....++++..||+||.+.+ +.|+.++|||+||+|++|++.. ........+.. -..||
T Consensus 405 s~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g------~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip 478 (516)
T KOG1033|consen 405 SQDKDETVAPAAASHTQQVGTLLYMSPEQIRG------QQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGIIP 478 (516)
T ss_pred ecccCCcccchhhhhhhcccccccCCHHHHhh------hhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCC
Confidence 87764311111112345667779999999998 5888999999999999999972 11111111111 13455
Q ss_pred cc-------hHHHHHHHhccCCCCCCChHH
Q 004157 254 KS-------LLPDYQRLLSSMPSRRLNSSK 276 (771)
Q Consensus 254 ~~-------l~~~i~~lL~~~P~~Rps~~~ 276 (771)
+. -..++++|+.+.|.+||++..
T Consensus 479 ~~~~~d~p~e~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 479 PEFLQDYPEEYTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred hHHhhcCcHHHHHHHHhcCCCcccCchHHH
Confidence 32 236788999999999995543
No 424
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.50 E-value=3e-15 Score=167.49 Aligned_cols=222 Identities=16% Similarity=0.243 Sum_probs=164.8
Q ss_pred ECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCCcccEEEEEecCCc--chHHHHH
Q 004157 41 SKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIK 117 (771)
Q Consensus 41 ~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v~--~L~~~L~ 117 (771)
..+.|.-+++|+..+..........-+.|-.++...+ ||.+++....++.+. ..|++.+++. .|...+.
T Consensus 18 g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~--------kl~l~ld~~rgg~lft~l~ 89 (612)
T KOG0603|consen 18 GADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDG--------KLYLILDFLRGGDLFTRLS 89 (612)
T ss_pred cccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecccc--------chhHhhhhcccchhhhccc
Confidence 3455777888887765333222234556778888887 999999999999854 7899999993 5666655
Q ss_pred HhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCcccccccc
Q 004157 118 ELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLV 197 (771)
Q Consensus 118 ~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~ 197 (771)
.... ......+..+..++-++.++|. .+++|+|+|++||+++.+|.+|+.|||+.+..-.... .++
T Consensus 90 ~~~~---f~~~~~~~~~aelaLald~lh~-l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~----------~cg 155 (612)
T KOG0603|consen 90 KEVM---FDELDVAFYLAELALALDHLHK-LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI----------ACG 155 (612)
T ss_pred cCCc---hHHHHHHHHHHHHHHHHhhcch-hHHHHhcccccceeecccCccccCCchhhhHhHhhhh----------ccc
Confidence 5433 2233456668999999999995 9999999999999999999999999999887654211 133
Q ss_pred CCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhcc----CCCCc----chHHHHHHHhccCCC
Q 004157 198 GAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRNT----ASIPK----SLLPDYQRLLSSMPS 269 (771)
Q Consensus 198 ~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~~----~~IP~----~l~~~i~~lL~~~P~ 269 (771)
+..||+||+.++ ...++|.||||++++++++|..+|..+..+.+ ..+|. ..+.++.+|+..+|.
T Consensus 156 t~eymApEI~~g--------h~~a~D~ws~gvl~felltg~~pf~~~~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~ 227 (612)
T KOG0603|consen 156 TYEYRAPEIING--------HLSAADWWSFGVLAFELLTGTLPFGGDTMKRILKAELEMPRELSAEARSLFRQLFKRNPE 227 (612)
T ss_pred chhhhhhHhhhc--------cCCcccchhhhhhHHHHhhCCCCCchHHHHHHhhhccCCchhhhHHHHHHHHHHHhhCHH
Confidence 458999999873 34689999999999999999999988655443 23444 455667788889999
Q ss_pred CCCCh-----HHHhhCCCCCcchhhhhhh
Q 004157 270 RRLNS-----SKLIENSEYFQNKLVDTIH 293 (771)
Q Consensus 270 ~Rps~-----~~lL~~~~fF~n~lv~~~~ 293 (771)
.|.-. .++.+| .||+......+.
T Consensus 228 nrLg~~~~~~~eik~h-~f~~~i~~~~l~ 255 (612)
T KOG0603|consen 228 NRLGAGPDGVDEIKQH-EFFQSIDWNELE 255 (612)
T ss_pred HHhccCcchhHHHhcc-chheeeeHhhHh
Confidence 99864 455555 788765554333
No 425
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.49 E-value=3e-14 Score=143.98 Aligned_cols=225 Identities=15% Similarity=0.165 Sum_probs=156.1
Q ss_pred eecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCccc
Q 004157 22 NIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKI 100 (771)
Q Consensus 22 ~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~ 100 (771)
.+..++.... | .+|+|++. |..+.+|++............+..|+-.|+.+.||||+.++..+.. +.
T Consensus 193 nl~tkl~e~hsg--elwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacns--------pp 260 (448)
T KOG0195|consen 193 NLITKLAESHSG--ELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNS--------PP 260 (448)
T ss_pred hhhhhhccCCCc--cccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccC--------CC
Confidence 3344555444 6 78888875 6677788877654444455668889999999999999999999976 34
Q ss_pred EEEEEecCC--cchHHHHHHhCC---CCCCcHHHHHHHHHHHHHHHHHHHcCCCceec-CCCCCCEEEcCCCcEEEE--c
Q 004157 101 TIYIVTEPV--MPLSEKIKELGL---EGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHG-NVCLSSVVVTQTLDWKLH--A 172 (771)
Q Consensus 101 ~iyIVtE~v--~~L~~~L~~~~~---~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~-dIkp~NI~v~~~G~~KL~--d 172 (771)
++.+++.|+ ++|+.+|.+... ...+... ....|+.|+.|||+-..++-+ .|+...|+|+++-..+|. |
T Consensus 261 nlv~isq~mp~gslynvlhe~t~vvvd~sqav~----faldiargmaflhslep~ipr~~lns~hvmidedltarismad 336 (448)
T KOG0195|consen 261 NLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVR----FALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMAD 336 (448)
T ss_pred CceEeeeeccchHHHHHHhcCccEEEecchHHH----HHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheeccc
Confidence 889999999 789999987542 2222222 278999999999984444443 688899999998776654 2
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhhhc----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEELRN---- 248 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l~~---- 248 (771)
--++.+ . .+....+.|++||.+...-. ...-.++|+|||++|+||+.+...||..-...+
T Consensus 337 ~kfsfq--e-----------~gr~y~pawmspealqrkpe---d~n~raadmwsfaillwel~trevpfadlspmecgmk 400 (448)
T KOG0195|consen 337 TKFSFQ--E-----------VGRAYSPAWMSPEALQRKPE---DLNIRAADMWSFAILLWELNTREVPFADLSPMECGMK 400 (448)
T ss_pred ceeeee--c-----------cccccCcccCCHHHHhcCch---hcchhhhhHHHHHHHHHHhhccccccccCCchhhhhh
Confidence 222211 1 11122347899998865311 122358999999999999999988875322111
Q ss_pred ------cCCCC----cchHHHHHHHhccCCCCCCChHHHh
Q 004157 249 ------TASIP----KSLLPDYQRLLSSMPSRRLNSSKLI 278 (771)
Q Consensus 249 ------~~~IP----~~l~~~i~~lL~~~P~~Rps~~~lL 278 (771)
...|| ..+..++.-|++.||.+||.++.++
T Consensus 401 ialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 401 IALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred hhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 12344 4566677789999999999987654
No 426
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.45 E-value=4.2e-13 Score=135.91 Aligned_cols=137 Identities=12% Similarity=0.074 Sum_probs=102.9
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch--------------------hHHHHHHHHHHHHhcCCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD--------------------GHLAAARNGVKRLRTVRH 78 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~--------------------~~~~~~~~ei~~Lk~LrH 78 (771)
-|.+.+.|+.|. | .||+|..+ +|+.|+||++....... .....+.+|+..+..+.|
T Consensus 16 ~~~~~~~i~~G~~g--~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 92 (198)
T cd05144 16 VESLGNQIGVGKES--DVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYE 92 (198)
T ss_pred hhhcCCccccCcce--EEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHH
Confidence 388999999998 7 99999875 79999999987542110 011236789999999988
Q ss_pred CC--eeEEeeeEEecccCcCCcccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecC
Q 004157 79 PN--ILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (771)
Q Consensus 79 Pn--Ilkv~d~~e~e~~d~~~~~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (771)
++ +..+++. ...|+||||+. +|...... .. ....+.+|+.++.++|+ .+++|||
T Consensus 93 ~~i~v~~~~~~------------~~~~lv~e~~~g~~L~~~~~~-----~~----~~~~~~~i~~~l~~lh~-~gi~H~D 150 (198)
T cd05144 93 EGFPVPKPIDW------------NRHAVVMEYIDGVELYRVRVL-----ED----PEEVLDEILEEIVKAYK-HGIIHGD 150 (198)
T ss_pred cCCCCCceeec------------CCceEEEEEeCCcchhhcccc-----cc----HHHHHHHHHHHHHHHHH-CCCCcCC
Confidence 74 4444431 13589999993 56543221 11 22338899999999996 8999999
Q ss_pred CCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 155 VCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 155 Ikp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
|+|+||++++++.++|+|||.+.....
T Consensus 151 l~p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 151 LSEFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CCcccEEEcCCCcEEEEECCccccCCC
Confidence 999999999999999999999976654
No 427
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.43 E-value=1.4e-13 Score=161.09 Aligned_cols=236 Identities=18% Similarity=0.252 Sum_probs=154.2
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcC
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDAT 96 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~ 96 (771)
...|+..+.+..|. | .||..+++.+.+++++ ++++.+ -.++| |+.+.+.
T Consensus 82 e~df~~IklisngAyg--avylvrh~~trqrfa~-kiNkq~------lilRn------------ilt~a~n--------- 131 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYG--AVYLVRHKETRQRFAM-KINKQN------LILRN------------ILTFAGN--------- 131 (1205)
T ss_pred ccccceeEeeccCCCC--ceeeeeccccccchhh-cccccc------hhhhc------------cccccCC---------
Confidence 45789999999888 8 8999999999999999 444321 12333 2322211
Q ss_pred CcccEEEEEecCCcchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 97 STKITIYIVTEPVMPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 97 ~~~~~iyIVtE~v~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
.+.| ++-...++..+... . +++.+++|||+ .+|+|||+||+|.+|+.-|.+||.|||+.
T Consensus 132 -----pfvv----gDc~tllk~~g~lP---v--------dmvla~Eylh~-ygivhrdlkpdnllIT~mGhiKlTDfgLs 190 (1205)
T KOG0606|consen 132 -----PFVV----GDCATLLKNIGPLP---V--------DMVLAVEYLHS-YGIVHRDLKPDNLLITSMGHIKLTDFGLS 190 (1205)
T ss_pred -----ccee----chhhhhcccCCCCc---c--------hhhHHhHhhcc-CCeecCCCCCCcceeeecccccccchhhh
Confidence 1222 22223333322211 1 22779999997 99999999999999999999999999997
Q ss_pred cccCCCCC--CCCCCc------ccccc-ccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh-
Q 004157 177 SEFDGNNE--AANGPM------LQYAW-LVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL- 246 (771)
Q Consensus 177 ~~~~~~~~--~~~~~~------~~~~~-~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l- 246 (771)
..--.... ...+.+ +.... +++..|.|||++.. ++|+..+|.|++|+++||.+-|..+|..+..
T Consensus 191 k~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr------qgygkpvdwwamGiIlyeFLVgcvpffGdtpe 264 (1205)
T KOG0606|consen 191 KKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR------QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE 264 (1205)
T ss_pred hhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhh------hccCCCccHHHHHHHHHHHheeeeeccCCCHH
Confidence 53211100 000000 11112 33458999999875 6899999999999999999999987755421
Q ss_pred --------------hccCCCCcchHHHHHHHhccCCCCCCChH---HHhhCCCCCcchhhh-hh-hhhhhhccCChhhHH
Q 004157 247 --------------RNTASIPKSLLPDYQRLLSSMPSRRLNSS---KLIENSEYFQNKLVD-TI-HFMEILNLKDSVEKD 307 (771)
Q Consensus 247 --------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~---~lL~~~~fF~n~lv~-~~-~~L~~l~~k~~~eK~ 307 (771)
.....+|.+..+++.+||..+|..|.-.. ++.+ .+||+..... .+ +.++-..+++.++..
T Consensus 265 elfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~-h~ff~~LDw~~llRqkaefvpql~~eddt 343 (1205)
T KOG0606|consen 265 ELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQ-HGFFQLLDWKSLLRQKAEFVPQLESEDDT 343 (1205)
T ss_pred HHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhh-ccceeecccchhhhhhccccccccccccc
Confidence 12356788999999999999999998532 3333 4787653322 11 123334555566666
Q ss_pred hhhh
Q 004157 308 TFFR 311 (771)
Q Consensus 308 ~F~~ 311 (771)
.||.
T Consensus 344 syfd 347 (1205)
T KOG0606|consen 344 SYFD 347 (1205)
T ss_pred hhhc
Confidence 6664
No 428
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.43 E-value=1.1e-12 Score=133.67 Aligned_cols=133 Identities=15% Similarity=0.093 Sum_probs=102.8
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCC
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATS 97 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~------~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~ 97 (771)
+.||.|. | .||+|.. +|..|+||+........ .....+.+|++.++.++|++|.....++...
T Consensus 2 ~~l~~G~~~--~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~------ 71 (211)
T PRK14879 2 KLIKRGAEA--EIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP------ 71 (211)
T ss_pred cccccCceE--EEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC------
Confidence 4678887 8 8999987 68899999876432211 1234577899999999999876655555432
Q ss_pred cccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 98 TKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 98 ~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
...|+||||+ .+|.+.+..... .....+.+++.+|.+||+ .+++|||++|.||+++ ++.++|+|||+
T Consensus 72 --~~~~lv~e~~~G~~L~~~~~~~~~-------~~~~i~~~i~~~l~~lH~-~~i~H~Dl~p~Nil~~-~~~~~liDf~~ 140 (211)
T PRK14879 72 --ENFIIVMEYIEGEPLKDLINSNGM-------EELELSREIGRLVGKLHS-AGIIHGDLTTSNMILS-GGKIYLIDFGL 140 (211)
T ss_pred --CCCEEEEEEeCCcCHHHHHHhccH-------HHHHHHHHHHHHHHHHHh-CCcccCCCCcccEEEE-CCCEEEEECCc
Confidence 2569999999 368888765321 234458999999999996 8999999999999999 88999999998
Q ss_pred ccc
Q 004157 176 LSE 178 (771)
Q Consensus 176 a~~ 178 (771)
+..
T Consensus 141 a~~ 143 (211)
T PRK14879 141 AEF 143 (211)
T ss_pred ccC
Confidence 764
No 429
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.43 E-value=7.1e-13 Score=158.16 Aligned_cols=192 Identities=14% Similarity=0.201 Sum_probs=141.3
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC---CCCeeEEeeeEEeccc
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR---HPNILAFLHSTEVENI 93 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr---HPnIlkv~d~~e~e~~ 93 (771)
+-.|.|.+.+|.|+ | +||.|+..+ |+.||+|+-...+.-+-++ ..+++.+|+ -|.|..+...+...+
T Consensus 697 ~~~~~I~~e~G~g~y~--~vy~a~~~~-~~~~alK~e~P~~~WEfYI-----~~q~~~RLk~~~~~~~~~~~~a~~~~~- 767 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYG--SVYVATHSN-GKLVALKVEKPPNPWEFYI-----CLQVMERLKPQMLPSIMHISSAHVFQN- 767 (974)
T ss_pred ceeEEEEeeeccccce--EEEEeecCC-CcEEEEEeecCCCceeeee-----hHHHHHhhchhhhcchHHHHHHHccCC-
Confidence 44699999999997 7 999999886 9999999977655544211 122333333 456666666655432
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-------
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ------- 164 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~------- 164 (771)
.-++|+||. |+|.+++...+. .....+..+..|++.-+..||. ++||||||||+|.++..
T Consensus 768 -------~S~lv~ey~~~Gtlld~~N~~~~---m~e~lv~~~~~qml~ive~lH~-~~IIHgDiKPDNfll~~~~~~~~~ 836 (974)
T KOG1166|consen 768 -------ASVLVSEYSPYGTLLDLINTNKV---MDEYLVMFFSCQMLRIVEHLHA-MGIIHGDIKPDNFLLRREICADSD 836 (974)
T ss_pred -------cceeeeeccccccHHHhhccCCC---CCchhhhHHHHHHHHHHHHHHh-cceecccCCcceeEeecccCCCCc
Confidence 458999998 899999884432 2233455669999999999995 99999999999999953
Q ss_pred CCcEEEEccCcccccCCCCCCCCCCccccc-cccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCC
Q 004157 165 TLDWKLHAFDVLSEFDGNNEAANGPMLQYA-WLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRL 240 (771)
Q Consensus 165 ~G~~KL~dFgla~~~~~~~~~~~~~~~~~~-~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p 240 (771)
.-.++|+|||.+..+.-.... ..+. ...+..+..+|+..| +.+++.+|.|+|+-++|-|+.|...
T Consensus 837 ~~~l~lIDfG~siDm~lfp~~-----~~F~~~~~td~f~C~EM~~g------rpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 837 SKGLYLIDFGRSIDMKLFPDG-----TKFKAVWHTDLFDCIEMREG------RPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred ccceEEEecccceeeeEcCCC-----cEEeeeeccccchhHHHhcC------CCCchhhhhHHHHHHHHHHHHHHHH
Confidence 234999999999877543211 1222 233457889999887 5788999999999999999998754
No 430
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.42 E-value=7.6e-13 Score=148.36 Aligned_cols=193 Identities=17% Similarity=0.224 Sum_probs=140.4
Q ss_pred HhcCCCCCeeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCc
Q 004157 73 LRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKL 150 (771)
Q Consensus 73 Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~i 150 (771)
|+.+.|.|+.++++.+.+. ..+++|.+|| ++|.+.+......- ...+....++.|+.||.|||+..-.
T Consensus 1 l~~l~h~n~~~f~g~~~~~--------~~~~~i~~~c~rGsl~D~i~~~~~~~--d~~F~~s~~rdi~~Gl~ylh~s~i~ 70 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG--------PEMIVIWEYCSRGSLLDILSNEDIKL--DYFFILSFIRDISKGLAYLHNSPIG 70 (484)
T ss_pred CcccchhhhhhheeeEecC--------CceEEEEeeecCccHHhHHhccccCc--cHHHHHHHHHHHHHHHHHHhcCcce
Confidence 5788999999999999874 4889999999 78999998744321 1222334489999999999985555
Q ss_pred eecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCccccccccCCCCCChhcccccccc-ccCCCCCcchHHHHHH
Q 004157 151 VHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTA-VRKSPPWSIDSWGLGC 229 (771)
Q Consensus 151 vH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~-~~~~~~~~~Di~SLG~ 229 (771)
.||+++..|.+++..-.+||.|||+......... ...........-|.|||.+.+.-.. .....+.+.|+||+|+
T Consensus 71 ~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~----~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~i 146 (484)
T KOG1023|consen 71 YHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAE----PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGI 146 (484)
T ss_pred eeeeeccccceeeeeEEEEechhhhccccccccc----ccccchhHHHHhccCHHHhcccccccccccccccCCeehHHH
Confidence 9999999999999999999999999876643100 0000011112368999998863111 1112456899999999
Q ss_pred HHHHHhhCCCCCChhh-----------hhc------------cCCCCcchHHHHHHHhccCCCCCCChHHHhh
Q 004157 230 LIYELFSGMRLSKTEE-----------LRN------------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIE 279 (771)
Q Consensus 230 li~el~~g~~p~~~~~-----------l~~------------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~ 279 (771)
++||+++...+|.... ++. ...++..+..++++|+..+|..||++.++-.
T Consensus 147 i~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 147 IMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred HHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 9999999887764311 011 1145567888899999999999999988754
No 431
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.40 E-value=1.5e-12 Score=131.52 Aligned_cols=129 Identities=19% Similarity=0.130 Sum_probs=96.8
Q ss_pred CCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcc
Q 004157 27 YPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 27 ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~------~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~ 99 (771)
||.|. | +||+|.. +|..|+||++....... .....+.+|++.++.++|+++....-....+
T Consensus 2 ig~G~~~--~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-------- 69 (199)
T TIGR03724 2 IAKGAEA--IIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP-------- 69 (199)
T ss_pred CCCCceE--EEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC--------
Confidence 56776 6 9999984 57899999976432211 1235678899999999988654333222222
Q ss_pred cEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 100 ITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 100 ~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
...|+||||+ .+|.+.+..... ..+.|++.+|.+||+ .+++|||++|.||+++ ++.+++.|||++.
T Consensus 70 ~~~~lv~e~~~g~~l~~~~~~~~~----------~~~~~i~~~l~~lH~-~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~ 137 (199)
T TIGR03724 70 DNKTIVMEYIEGKPLKDVIEEGND----------ELLREIGRLVGKLHK-AGIVHGDLTTSNIIVR-DDKLYLIDFGLGK 137 (199)
T ss_pred CCCEEEEEEECCccHHHHHhhcHH----------HHHHHHHHHHHHHHH-CCeecCCCCcceEEEE-CCcEEEEECCCCc
Confidence 2569999999 468777654311 338999999999996 8999999999999999 8999999999876
Q ss_pred cc
Q 004157 178 EF 179 (771)
Q Consensus 178 ~~ 179 (771)
..
T Consensus 138 ~~ 139 (199)
T TIGR03724 138 YS 139 (199)
T ss_pred CC
Confidence 53
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.35 E-value=4e-12 Score=127.04 Aligned_cols=138 Identities=17% Similarity=0.182 Sum_probs=95.7
Q ss_pred ecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhH-H---------------------HHHHHHHHHHhcCCCC
Q 004157 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGH-L---------------------AAARNGVKRLRTVRHP 79 (771)
Q Consensus 23 i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~-~---------------------~~~~~ei~~Lk~LrHP 79 (771)
+++.||.|+ | +||.|.+. +|+.|+||++......... . .....|++.+.++++.
T Consensus 1 ~~~~lg~G~~g--~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~ 77 (187)
T cd05119 1 VGGPIGTGKEA--DVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEA 77 (187)
T ss_pred CCcccccccce--eEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHc
Confidence 356788888 8 99999987 8999999998754321111 1 1124667777777654
Q ss_pred C--eeEEeeeEEecccCcCCcccEEEEEecCCcc--h-HHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecC
Q 004157 80 N--ILAFLHSTEVENIDATSTKITIYIVTEPVMP--L-SEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (771)
Q Consensus 80 n--Ilkv~d~~e~e~~d~~~~~~~iyIVtE~v~~--L-~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (771)
+ +.+++... ..|+||||+.. + ...+...... .....++.+++.++.++|...+++|||
T Consensus 78 ~~~~~~~~~~~------------~~~lv~e~~~g~~~~~~~l~~~~~~-----~~~~~~~~~~~~~l~~lh~~~~ivH~D 140 (187)
T cd05119 78 GVPVPKPIDLN------------RHVLVMEFIGGDGIPAPRLKDVRLL-----EDPEELYDQILELMRKLYREAGLVHGD 140 (187)
T ss_pred CCCCCceEecC------------CCEEEEEEeCCCCccChhhhhhhhc-----ccHHHHHHHHHHHHHHHhhccCcCcCC
Confidence 3 44444321 34999999932 1 1222222111 123445899999999999658999999
Q ss_pred CCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 155 VCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 155 Ikp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
|||+||+++ ++..+|+|||.+.....
T Consensus 141 l~p~Nili~-~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 141 LSEYNILVD-DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred CChhhEEEE-CCcEEEEECcccccccC
Confidence 999999999 99999999999977654
No 433
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.34 E-value=6.7e-12 Score=146.38 Aligned_cols=134 Identities=14% Similarity=0.062 Sum_probs=101.6
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc------hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEeccc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ------DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENI 93 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~------~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~ 93 (771)
|...+.||.|. | +||+|... +..+++|+...+... ....+.+.+|++.++.++|++|+..+.+...+
T Consensus 335 ~~~~~~iG~G~~g--~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-- 408 (535)
T PRK09605 335 KIPDHLIGKGAEA--DIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP-- 408 (535)
T ss_pred cCccceeccCCcE--EEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC--
Confidence 45567789988 8 99999864 445555554332111 12245678999999999999988776555442
Q ss_pred CcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEE
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLH 171 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~ 171 (771)
...|+||||+ ++|.+++.. ....+.|++.+|.+||+ .+++||||||+||++ .++.++|+
T Consensus 409 ------~~~~lv~E~~~g~~L~~~l~~-----------~~~~~~~i~~~L~~lH~-~giiHrDlkp~NILl-~~~~~~li 469 (535)
T PRK09605 409 ------EEKTIVMEYIGGKDLKDVLEG-----------NPELVRKVGEIVAKLHK-AGIVHGDLTTSNFIV-RDDRLYLI 469 (535)
T ss_pred ------CCCEEEEEecCCCcHHHHHHH-----------HHHHHHHHHHHHHHHHh-CCCccCCCChHHEEE-ECCcEEEE
Confidence 2568999999 478887762 12338899999999996 899999999999999 67889999
Q ss_pred ccCccccc
Q 004157 172 AFDVLSEF 179 (771)
Q Consensus 172 dFgla~~~ 179 (771)
|||+++..
T Consensus 470 DFGla~~~ 477 (535)
T PRK09605 470 DFGLGKYS 477 (535)
T ss_pred eCcccccC
Confidence 99998764
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.33 E-value=8.1e-12 Score=130.44 Aligned_cols=130 Identities=12% Similarity=0.071 Sum_probs=94.6
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCC-----c------hhHHHHHHHHHHHHhcCCCCCe--eEEeeeEEecccCcCCcccE
Q 004157 35 SHFQGTSKDDGSPVSIFSISGTNA-----Q------DGHLAAARNGVKRLRTVRHPNI--LAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 35 tVy~g~~k~~g~~VaIK~~~~~~~-----~------~~~~~~~~~ei~~Lk~LrHPnI--lkv~d~~e~e~~d~~~~~~~ 101 (771)
+||.+... +..++||.+..... . ......+.+|++.++.|+|++| ...+...+.+... ...
T Consensus 47 tv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~----~~~ 120 (239)
T PRK01723 47 TTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGL----FYR 120 (239)
T ss_pred cEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCc----cee
Confidence 66666543 78899999864221 1 1223567889999999999885 6777665443211 113
Q ss_pred EEEEecCCc---chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccc
Q 004157 102 IYIVTEPVM---PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSE 178 (771)
Q Consensus 102 iyIVtE~v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~ 178 (771)
.+||||++. +|.+++..... .... +.||+.+|.+||. +||+||||||.||+++.++.++|+|||.+..
T Consensus 121 ~~lV~e~l~G~~~L~~~l~~~~l----~~~~----~~~i~~~l~~lH~-~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 121 ADILIERIEGARDLVALLQEAPL----SEEQ----WQAIGQLIARFHD-AGVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred eeEEEEecCCCCCHHHHHhcCCC----CHHH----HHHHHHHHHHHHH-CCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 369999993 58777765321 2222 6799999999996 9999999999999999999999999998865
Q ss_pred c
Q 004157 179 F 179 (771)
Q Consensus 179 ~ 179 (771)
.
T Consensus 192 ~ 192 (239)
T PRK01723 192 R 192 (239)
T ss_pred C
Confidence 3
No 435
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.20 E-value=2.5e-11 Score=136.34 Aligned_cols=241 Identities=18% Similarity=0.125 Sum_probs=170.8
Q ss_pred CceecCCCCC--CCCceEEEEeEE--CCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccC
Q 004157 20 PYNIGDPYPS--AWGSWSHFQGTS--KDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENID 94 (771)
Q Consensus 20 ~Y~i~e~ig~--G~g~wtVy~g~~--k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d 94 (771)
.+.+...+|. |. -|.+|.+.. +.++..+++|.-+...........-.+|+...++++ |+|.++.+..++..
T Consensus 115 ~~~~~~~~g~~~g~-~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~--- 190 (524)
T KOG0601|consen 115 RFPISSRTGSLPGS-KGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS--- 190 (524)
T ss_pred hcccccccccCCCC-CceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccC---
Confidence 4556667777 64 338999998 899999999985433221111222345777777776 99999988888863
Q ss_pred cCCcccEEEEEecCCc-chHHHHHHhCCCCCCcHHHHHHHHHHHHH----HHHHHHcCCCceecCCCCCCEEEcCC-CcE
Q 004157 95 ATSTKITIYIVTEPVM-PLSEKIKELGLEGSQRDEYYAWGLNQIAK----AVSFLNNDCKLVHGNVCLSSVVVTQT-LDW 168 (771)
Q Consensus 95 ~~~~~~~iyIVtE~v~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~----aL~fLH~~~~ivH~dIkp~NI~v~~~-G~~ 168 (771)
...||-||+|+ .|..+....... .....++-.+.+... ||..+|. ++++|.+++|.|||...+ ...
T Consensus 191 -----~~lfiqtE~~~~sl~~~~~~~~~~--~p~~~l~~~~~~~~~~~~~al~~~hs-~~~~~~~~kp~~i~~~~~~~s~ 262 (524)
T KOG0601|consen 191 -----GILFIQTELCGESLQSYCHTPCNF--LPDNLLWNSLRDWLSRDVTALSHLHS-NNIVHDDLKPANIFTTSDWTSC 262 (524)
T ss_pred -----CcceeeeccccchhHHhhhccccc--CCchhhhhHHhhhhhcccccccccCC-Ccccccccchhheeccccccee
Confidence 48899999995 577766554321 112224444777777 9999997 899999999999999999 899
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChh----
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTE---- 244 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~---- 244 (771)
+++||+++..+...+....... .+....+..|++||+.++ -++...|+|+||.++.+...+..+....
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~-~~r~~~~~~Y~~ke~~~~-------l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~ 334 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKV-SKRPEGDCIYAAKELLNG-------LATFASDIFSLGEVILEAILGSHLPSVGKNSS 334 (524)
T ss_pred ecCCcceeEEccCCccccceee-eecCCCCceEeChhhhcc-------ccchHhhhcchhhhhHhhHhhcccccCCCCCC
Confidence 9999999998876542211111 122244568999999886 4668999999999999988876543221
Q ss_pred --hhhc-------cCCCCcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 245 --ELRN-------TASIPKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 245 --~l~~-------~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
++++ +......+...+.+|+..++..|++...+..+
T Consensus 335 W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 335 WSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred ccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 1222 12333445667889999999999999877665
No 436
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.20 E-value=9.6e-11 Score=111.09 Aligned_cols=130 Identities=15% Similarity=0.061 Sum_probs=98.7
Q ss_pred ecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCC--CCeeEEeeeEEecccCcCCcc
Q 004157 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRH--PNILAFLHSTEVENIDATSTK 99 (771)
Q Consensus 23 i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrH--PnIlkv~d~~e~e~~d~~~~~ 99 (771)
+.+.++.|. + .||+++.. +..++||.+..... ...+.+|+..++.|+| +++.+++...+..
T Consensus 2 ~~~~i~~g~~~--~v~~~~~~--~~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~-------- 65 (155)
T cd05120 2 SIKLLKGGLTN--RVYLLGTK--DEDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESD-------- 65 (155)
T ss_pred cceeccccccc--ceEEEEec--CCeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC--------
Confidence 345678876 6 89999875 47899999865432 3457789999999986 4888888877653
Q ss_pred cEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcC--CCceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 100 ITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNND--CKLVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 100 ~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~--~~ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
...|+++||+. ++..+ ........+.+++.+|.+||.- .+++|||++|+||+++..+.++|.|||.
T Consensus 66 ~~~~~v~e~~~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~ 135 (155)
T cd05120 66 GWSYLLMEWIEGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEY 135 (155)
T ss_pred CccEEEEEecCCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEeccc
Confidence 36899999993 34322 1112233488999999999963 2699999999999999999999999998
Q ss_pred ccc
Q 004157 176 LSE 178 (771)
Q Consensus 176 a~~ 178 (771)
+..
T Consensus 136 ~~~ 138 (155)
T cd05120 136 AGY 138 (155)
T ss_pred ccC
Confidence 753
No 437
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.17 E-value=5.1e-12 Score=147.74 Aligned_cols=246 Identities=15% Similarity=0.151 Sum_probs=174.0
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEECC-CCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEeccc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSKD-DGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k~-~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~ 93 (771)
+..+|.+.+.+|.|. + .+-...+.. ....++++.+............+..|..+-+.+. |+|++++++....
T Consensus 18 ~~~~~~~~~~ig~gs~~--~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~--- 92 (601)
T KOG0590|consen 18 PNSQYKLSRSIGKGSFS--SSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS--- 92 (601)
T ss_pred ccccccccccccccccc--hhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC---
Confidence 367899999999887 5 455554432 3345566665544323344556667888888887 9999999998876
Q ss_pred CcCCcccEEEEEecCC--cchHHHHH-Hh--CCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC-c
Q 004157 94 DATSTKITIYIVTEPV--MPLSEKIK-EL--GLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL-D 167 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v--~~L~~~L~-~~--~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G-~ 167 (771)
....|+++|+. +.+...+. .. ...... ....+.|+..+|.|+|..+++.|+||+|+|.+++.+| .
T Consensus 93 -----~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~----~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~ 163 (601)
T KOG0590|consen 93 -----PRSYLLSLSYSDGGSLFSKISHPDSTGTSSSS----ASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSA 163 (601)
T ss_pred -----CcccccccCcccccccccccccCCccCCCCcc----hhhhhhhhccCccccCcccccccCCCCCccchhccCCCc
Confidence 34889999998 35666652 22 112222 2334999999999999338999999999999999999 9
Q ss_pred EEEEccCcccccCCCCCCCCCCcccccccc-CCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCChhhh
Q 004157 168 WKLHAFDVLSEFDGNNEAANGPMLQYAWLV-GAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKTEEL 246 (771)
Q Consensus 168 ~KL~dFgla~~~~~~~~~~~~~~~~~~~~~-~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~~~l 246 (771)
.|+.|||+++.+...+.. ........+ ...|++||...+. .......|+||+|+++..++.|..++.....
T Consensus 164 l~~~df~~At~~~~~~g~---~~~~~~~~g~s~~y~a~E~~~~~-----~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~ 235 (601)
T KOG0590|consen 164 LKIADFGLATAYRNKNGA---ERSLKDRCGSSPPYGAPEHLSGK-----AYRGPSVDVWSLGIVLSAMLTGELPWDFPSR 235 (601)
T ss_pred ccCCCchhhccccccCCc---ceeeecccCCCCCCCCcccccch-----hhcCCCcccccccccccccccCCCCcccccc
Confidence 999999999887652111 111222233 5589999998762 2345689999999999999999876532211
Q ss_pred -----------------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCCCCC
Q 004157 247 -----------------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENSEYF 284 (771)
Q Consensus 247 -----------------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~~fF 284 (771)
.....+......++.+++..+|..|.+..++-.+.++-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~ 290 (601)
T KOG0590|consen 236 KDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLS 290 (601)
T ss_pred ccccceeecccccccccCccccCChhhhhcccccccCCchhcccccccccccccc
Confidence 11245666777888889999999999999987764433
No 438
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.04 E-value=3.8e-11 Score=125.00 Aligned_cols=205 Identities=16% Similarity=0.177 Sum_probs=133.3
Q ss_pred HHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCC-CCcHHHHHHHHHHHHHHHH
Q 004157 66 ARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEG-SQRDEYYAWGLNQIAKAVS 142 (771)
Q Consensus 66 ~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~-~~~~~~i~~gl~QI~~aL~ 142 (771)
.+.-+..|-.|-|-||++++.++.+.... .+..+.++|||+ ++|..+|++..... ......+...+-||+.||.
T Consensus 114 ~~~vFdnllqlvHsnlvkfH~yw~d~K~~---e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~ 190 (458)
T KOG1266|consen 114 RRAVFDNLLQLVHSNLVKFHKYWTDKKYE---EKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALS 190 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccc---cccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhh
Confidence 34446777788899999999999764431 155789999999 67999998754322 1222334445999999999
Q ss_pred HHHcCC--CceecCCCCCCEEEcCCCcEEEEccCcccccCCCCCCCCCCcccccc---ccCCCCCChhccccccccccCC
Q 004157 143 FLNNDC--KLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDGNNEAANGPMLQYAW---LVGAQYKPVELAKSDWTAVRKS 217 (771)
Q Consensus 143 fLH~~~--~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~~~~~~~~~~~~~~~---~~~~~Y~aPE~~~~~~~~~~~~ 217 (771)
|||+ | -++|+|+..+.||+..+|-+|++--......... ........ ..-..|.+||.-.. .+
T Consensus 191 yLhs-~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~-----~~~~~~Ek~~~~~~~g~~a~~sg~~------tn 258 (458)
T KOG1266|consen 191 YLHS-CDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSV-----NSTREAEKSVNTSLPGFSAPESGTT------TN 258 (458)
T ss_pred hhhc-cCCccccCCcchhheeecCCceEEecccCccccchhh-----hhhhHhhhhccccCCccccCCcCcc------cc
Confidence 9997 6 6999999999999999999998743222111100 00000000 11236788886443 24
Q ss_pred CCCcchHHHHHHHHHHHhhCCCC-CChhh-------h-hccCCCCcch-HHHHHHHhccCCCCCCChHHHhhCCCCCc
Q 004157 218 PPWSIDSWGLGCLIYELFSGMRL-SKTEE-------L-RNTASIPKSL-LPDYQRLLSSMPSRRLNSSKLIENSEYFQ 285 (771)
Q Consensus 218 ~~~~~Di~SLG~li~el~~g~~p-~~~~~-------l-~~~~~IP~~l-~~~i~~lL~~~P~~Rps~~~lL~~~~fF~ 285 (771)
..-++|||++|....+|--+..- ..++. . ..+..+...+ ...+.+|++..|..||++..++.|+-.|.
T Consensus 259 ~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~len~lqr~~i~kcl~~eP~~rp~ar~llfHpllfe 336 (458)
T KOG1266|consen 259 TTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFE 336 (458)
T ss_pred cccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeeccCccccCcCcccccCCCCCCcchhhhhcCceeee
Confidence 45689999999888887665421 11110 0 0011111222 34567899999999999999999966554
No 439
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.02 E-value=1.9e-09 Score=108.50 Aligned_cols=136 Identities=12% Similarity=0.067 Sum_probs=93.1
Q ss_pred CCCCCCC-CceEEEEeEECC------CCCcEEEEEEeCCCC--------------------chhHHHHH----HHHHHHH
Q 004157 25 DPYPSAW-GSWSHFQGTSKD------DGSPVSIFSISGTNA--------------------QDGHLAAA----RNGVKRL 73 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~------~g~~VaIK~~~~~~~--------------------~~~~~~~~----~~ei~~L 73 (771)
..|+.|- + .||.|.... .+..||||++..... .......+ ++|++.|
T Consensus 3 g~i~~GKEa--~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L 80 (197)
T cd05146 3 GCISTGKES--VVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNL 80 (197)
T ss_pred CccccCcce--EEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHH
Confidence 4566676 7 899998653 357999999984210 00112233 4899999
Q ss_pred hcCCC--CCeeEEeeeEEecccCcCCcccEEEEEecCCcc--h-HHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHH-HcC
Q 004157 74 RTVRH--PNILAFLHSTEVENIDATSTKITIYIVTEPVMP--L-SEKIKELGLEGSQRDEYYAWGLNQIAKAVSFL-NND 147 (771)
Q Consensus 74 k~LrH--PnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v~~--L-~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fL-H~~ 147 (771)
++|+. -++.+++++.. -+|||||++. + ...|+..... ...+...+.|++.+|..| |.
T Consensus 81 ~rl~~~Gv~vP~pi~~~~------------~~lvME~Ig~~~~~~~~Lkd~~~~----~~~~~~i~~~i~~~l~~l~H~- 143 (197)
T cd05146 81 KRMQKAGIPCPEVVVLKK------------HVLVMSFIGDDQVPAPKLKDAKLN----DEEMKNAYYQVLSMMKQLYKE- 143 (197)
T ss_pred HHHHHcCCCCCeEEEecC------------CEEEEEEcCCCCccchhhhccccC----HHHHHHHHHHHHHHHHHHHHh-
Confidence 99963 45666666422 3899999953 2 1223332211 122334478999999999 75
Q ss_pred CCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 148 ~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
+++|||||++.||++. +|.+.|+|||.+....
T Consensus 144 ~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 144 CNLVHADLSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CCeecCCCCHHHEEEE-CCcEEEEECCCceeCC
Confidence 9999999999999996 5789999999887664
No 440
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.97 E-value=3e-09 Score=120.63 Aligned_cols=140 Identities=11% Similarity=0.076 Sum_probs=91.0
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch--h------------------------------HH------HH
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD--G------------------------------HL------AA 65 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~--~------------------------------~~------~~ 65 (771)
++++.|+ | .||+|+.+ +|+.|+||+........ . .. -.
T Consensus 123 ~plasaSig--QVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 199 (437)
T TIGR01982 123 KPLAAASIA--QVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELD 199 (437)
T ss_pred cceeeeehh--heEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHC
Confidence 5688887 8 99999976 79999999986532110 0 00 01
Q ss_pred HHHHHHHHhcCC----CCCeeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHH
Q 004157 66 ARNGVKRLRTVR----HPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAK 139 (771)
Q Consensus 66 ~~~ei~~Lk~Lr----HPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~ 139 (771)
+.+|.+.+.+++ |.+-+.+-.++...+ +..+|||||+ .+|.+.+...... ..... + ..+++.
T Consensus 200 f~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~-------~~~vLvmE~i~G~~L~~~~~~~~~~-~~~~~-i---a~~~~~ 267 (437)
T TIGR01982 200 LRREAANASELGENFKNDPGVYVPEVYWDRT-------SERVLTMEWIDGIPLSDIAALDEAG-LDRKA-L---AENLAR 267 (437)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEeCCEehhhc-------CCceEEEEeECCcccccHHHHHhcC-CCHHH-H---HHHHHH
Confidence 344555555553 443344444443221 2459999999 3677665432111 11111 2 344444
Q ss_pred -HHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccC
Q 004157 140 -AVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 140 -aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
.+..+|. .|++|+|+||.||+++.+|.++|+|||++..+.
T Consensus 268 ~~l~ql~~-~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 268 SFLNQVLR-DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHHh-CCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 4678886 899999999999999999999999999987654
No 441
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.92 E-value=1.5e-09 Score=124.92 Aligned_cols=142 Identities=13% Similarity=0.152 Sum_probs=90.4
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch--------------------------------hHHH---
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD--------------------------------GHLA--- 64 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~--------------------------------~~~~--- 64 (771)
|+. ++++.|+ | .||.|+.+++|+.|+||+........ +..+
T Consensus 122 fd~-~PlasaSia--QVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 122 FDI-KPLASASIA--QVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred cCh-hhhcCCCcc--EEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 554 6888888 8 99999999889999999997531100 1111
Q ss_pred ---HHHHHHHHHhcCC----CCCeeEEeeeEEecccCcCCcccEEEEEecCC--cchHHH--HHHhCCCCC-CcHHHHHH
Q 004157 65 ---AARNGVKRLRTVR----HPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEK--IKELGLEGS-QRDEYYAW 132 (771)
Q Consensus 65 ---~~~~ei~~Lk~Lr----HPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~--L~~~~~~~~-~~~~~i~~ 132 (771)
.+.+|...+.+++ +.+.+.+-+++.+-+ +..+|||||| .+|.+. +...+.... .....+..
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~s-------t~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~ 271 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYC-------SETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEV 271 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccC-------CCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHH
Confidence 1334455555543 555555555554321 2568999999 467653 333221100 01111222
Q ss_pred HHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC----cEEEEccCcccccC
Q 004157 133 GLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL----DWKLHAFDVLSEFD 180 (771)
Q Consensus 133 gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G----~~KL~dFgla~~~~ 180 (771)
.+.||+ . .|++|+|+||.||+|+.+| .+++.|||++..+.
T Consensus 272 ~~~Qif-------~-~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 272 FFTQVF-------R-DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred HHHHHH-------h-CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 344443 2 6899999999999999988 99999999987664
No 442
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.85 E-value=8.6e-09 Score=100.96 Aligned_cols=124 Identities=13% Similarity=0.105 Sum_probs=86.3
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCe-eEEeeeEEecccCcCCcccEE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNI-LAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnI-lkv~d~~e~e~~d~~~~~~~i 102 (771)
+.++.|. + .||+++.. +..|+||+....... ....++|++.++.+.+.++ .+++..... .-
T Consensus 4 ~~l~~G~~~--~vy~~~~~--~~~~~lK~~~~~~~~---~~~~~~E~~~l~~l~~~~~~P~~~~~~~~----------~~ 66 (170)
T cd05151 4 SPLKGGMTN--KNYRVEVA--NKKYVVRIPGNGTEL---LINRENEAENSKLAAEAGIGPKLYYFDPE----------TG 66 (170)
T ss_pred eecCCcccC--ceEEEEEC--CeEEEEEeCCCCccc---ccCHHHHHHHHHHHHHhCCCCceEEEeCC----------CC
Confidence 3556665 6 78988764 788999997643211 2235789999999876554 445544321 24
Q ss_pred EEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC-----ceecCCCCCCEEEcCCCcEEEEccCc
Q 004157 103 YIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCK-----LVHGNVCLSSVVVTQTLDWKLHAFDV 175 (771)
Q Consensus 103 yIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~-----ivH~dIkp~NI~v~~~G~~KL~dFgl 175 (771)
++|||++. ++... . ..... .+.+++.+|..||. .+ ++|||++|.||+++ ++.++|+|||.
T Consensus 67 ~lv~e~i~G~~l~~~----~---~~~~~----~~~~l~~~l~~LH~-~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~ 133 (170)
T cd05151 67 VLITEFIEGSELLTE----D---FSDPE----NLEKIAKLLKKLHS-SPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEY 133 (170)
T ss_pred eEEEEecCCCccccc----c---ccCHH----HHHHHHHHHHHHhC-CCCCCceeecCCCCcCcEEEE-CCeEEEEeccc
Confidence 89999993 34321 0 11122 27899999999996 66 59999999999999 67899999999
Q ss_pred ccc
Q 004157 176 LSE 178 (771)
Q Consensus 176 a~~ 178 (771)
+..
T Consensus 134 a~~ 136 (170)
T cd05151 134 AGM 136 (170)
T ss_pred ccC
Confidence 763
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.73 E-value=6.1e-09 Score=117.34 Aligned_cols=235 Identities=16% Similarity=0.088 Sum_probs=155.9
Q ss_pred CCCCceecCCCCCCC-CceEEEEeEEC-CCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEeccc
Q 004157 17 KDLPYNIGDPYPSAW-GSWSHFQGTSK-DDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENI 93 (771)
Q Consensus 17 ~~~~Y~i~e~ig~G~-g~wtVy~g~~k-~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~ 93 (771)
+.-.|.+...|+.+. + .++....+ .++..|++|.....-...........|+.....|. |.+++.++..|...
T Consensus 263 ~~~df~~v~~i~~~~~~--~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~-- 338 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFS--SVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL-- 338 (524)
T ss_pred ecCCcceeEEccCCccc--cceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc--
Confidence 344677777888877 5 56666655 67788888887654333322223445666666664 88899988888753
Q ss_pred CcCCcccEEEEEecCCcc----hHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCC-CcE
Q 004157 94 DATSTKITIYIVTEPVMP----LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQT-LDW 168 (771)
Q Consensus 94 d~~~~~~~iyIVtE~v~~----L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~-G~~ 168 (771)
...||--|||.+ |...+... +. ...+.....|++.++.|+|+ ..++|+|++|+||++..+ +.-
T Consensus 339 ------r~~~ip~e~~~~~s~~l~~~~~~~-~d----~~~~~~~~~q~~~~l~~i~s-~~~~~~d~~psni~i~~~~~~~ 406 (524)
T KOG0601|consen 339 ------RQGYIPLEFCEGGSSSLRSVTSQM-LD----EDPRLRLTAQILTALNVIHS-KLFVHLDVKPSNILISNDGFFS 406 (524)
T ss_pred ------ccccCchhhhcCcchhhhhHHHHh-cC----cchhhhhHHHHHhccccccc-hhhhcccccccceeeccchhhh
Confidence 367899999943 22222211 11 11233448999999999996 899999999999999886 788
Q ss_pred EEEccCcccccCCCCCCCCCCccccccccCCCCCC-hhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCCCh-hhh
Q 004157 169 KLHAFDVLSEFDGNNEAANGPMLQYAWLVGAQYKP-VELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLSKT-EEL 246 (771)
Q Consensus 169 KL~dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~a-PE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~~~-~~l 246 (771)
+++||++.+.+.-. ........+|.| .|++... ..+..+.|+|+||.-+++..++.++... .+.
T Consensus 407 ~~~~~~~~t~~~~~---------~~~~~~~~r~~p~~~~~~e~-----~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~ 472 (524)
T KOG0601|consen 407 KLGDFGCWTRLAFS---------SGVFHHIDRLYPIAEILLED-----YPHLSKADIFSLGLSVDEAITGSPLSESGVQS 472 (524)
T ss_pred hcccccccccccee---------cccccccccccccchhhccc-----cccccccccccccccccccccCcccCcccccc
Confidence 99999998753221 111122334443 5555443 4566789999999999999998865433 111
Q ss_pred --------hccCCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 247 --------RNTASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 247 --------~~~~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
......+..++.+.+.++..++..|+.+-++..+.
T Consensus 473 ~~i~~~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~ 515 (524)
T KOG0601|consen 473 LTIRSGDTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHS 515 (524)
T ss_pred eeeecccccCCCchHHhhhhhhhhhcCCccccchhhhhhcccc
Confidence 11122234566667788889999999988876663
No 444
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.70 E-value=2.6e-07 Score=102.30 Aligned_cols=209 Identities=16% Similarity=0.196 Sum_probs=146.3
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEEEecCC---cc
Q 004157 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV---MP 111 (771)
Q Consensus 35 tVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v---~~ 111 (771)
+.|+++...||..|++|.++...... ...-..-+++++++.|+|||++.++|.+..-+ ...+++|++|. .+
T Consensus 291 Ttyk~~s~~DG~~YvLkRlhg~r~~~--~nk~t~lve~wkkl~h~NvV~frevf~t~tF~----D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 291 TTYKATSNVDGNAYVLKRLHGDRDQS--TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFG----DLSLVLVYDYYPSSPT 364 (655)
T ss_pred eeEeeeeccCCceeeeeeeccccccC--cccchHHHHHHHHhccCceeehhhhhhhhccC----cceEEEEEecCCCCch
Confidence 68999999999999999995422111 11122347889999999999999999854433 56899999998 35
Q ss_pred hHHHHHHhC-C----------CC-CCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 112 LSEKIKELG-L----------EG-SQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 112 L~~~L~~~~-~----------~~-~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
|.++.-... . .+ ...++++|-++.||..||.+||+ .|+.-+-|.+.+|+++.+-.++|++.|+....
T Consensus 365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs-sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS-SGLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh-cCceeecccHhHeEeeCcceEEEecccceeee
Confidence 666442211 1 11 12245677789999999999997 89999999999999999989999988876544
Q ss_pred CCCCCCCCCCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHHHHHhhCCCCC-C-----hhhhhcc-CCC
Q 004157 180 DGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLIYELFSGMRLS-K-----TEELRNT-ASI 252 (771)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li~el~~g~~p~-~-----~~~l~~~-~~I 252 (771)
..+. .. +-|.. .+-|.-.||.|+..|-+|..-. . ...++.+ ..+
T Consensus 444 ~~d~---~~--------------~le~~------------Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~~~y 494 (655)
T KOG3741|consen 444 QEDP---TE--------------PLESQ------------QQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRITTTY 494 (655)
T ss_pred cCCC---Cc--------------chhHH------------hhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhhhhh
Confidence 4321 00 11111 2568889999999999985321 1 1112222 456
Q ss_pred CcchHHHHHHHhccCCCCCCChHHHhhC
Q 004157 253 PKSLLPDYQRLLSSMPSRRLNSSKLIEN 280 (771)
Q Consensus 253 P~~l~~~i~~lL~~~P~~Rps~~~lL~~ 280 (771)
..++++.+.-+.+.++.. -++.+++.+
T Consensus 495 S~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 495 STDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred hHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 677888888888888776 677788765
No 445
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.69 E-value=1.3e-07 Score=94.72 Aligned_cols=126 Identities=15% Similarity=0.168 Sum_probs=80.0
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCC------------------------chhHHHHHHHHHHHHhcCCCC--CeeEEeeeE
Q 004157 35 SHFQGTSKDDGSPVSIFSISGTNA------------------------QDGHLAAARNGVKRLRTVRHP--NILAFLHST 88 (771)
Q Consensus 35 tVy~g~~k~~g~~VaIK~~~~~~~------------------------~~~~~~~~~~ei~~Lk~LrHP--nIlkv~d~~ 88 (771)
.||.|... +|+.|+||++..... .......+++|++.|+++..- ++.+++++.
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 48999874 688999999984210 002245678999999999865 466666553
Q ss_pred EecccCcCCcccEEEEEecCCc--c--hHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH-HHcCCCceecCCCCCCEEEc
Q 004157 89 EVENIDATSTKITIYIVTEPVM--P--LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSF-LNNDCKLVHGNVCLSSVVVT 163 (771)
Q Consensus 89 e~e~~d~~~~~~~iyIVtE~v~--~--L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~f-LH~~~~ivH~dIkp~NI~v~ 163 (771)
. -+|||||++ . +.. |......... ....+.+++..+.. +| .+|++|||+++.||+++
T Consensus 80 ~------------~~ivME~I~~~G~~~~~-l~~~~~~~~~----~~~~~~~il~~~~~~~~-~~givHGDLs~~NIlv~ 141 (188)
T PF01163_consen 80 R------------NVIVMEYIGEDGVPLPR-LKDVDLSPEE----PKELLEEILEEIIKMLH-KAGIVHGDLSEYNILVD 141 (188)
T ss_dssp T------------TEEEEE--EETTEEGGC-HHHCGGGGST----HHHHHHHHHHHHHHHHH-CTTEEESS-STTSEEEE
T ss_pred C------------CEEEEEecCCCccchhh-HHhccccchh----HHHHHHHHHHHHHHHHH-hcCceecCCChhhEEee
Confidence 2 189999996 2 433 3332211112 22237788885555 46 49999999999999998
Q ss_pred CCCcEEEEccCcccccC
Q 004157 164 QTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 164 ~~G~~KL~dFgla~~~~ 180 (771)
++ .+.++|||.+....
T Consensus 142 ~~-~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 142 DG-KVYIIDFGQAVDSS 157 (188)
T ss_dssp TT-CEEE--GTTEEETT
T ss_pred cc-eEEEEecCcceecC
Confidence 87 89999999887654
No 446
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.49 E-value=7.1e-08 Score=114.12 Aligned_cols=248 Identities=16% Similarity=0.180 Sum_probs=156.8
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc-hhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ-DGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~-~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+.+.+.+.++. + .++.+....+|.-..+++..+...- ....+.++.+-.++-.-+||-++...-.+-.
T Consensus 806 ~~i~~p~qS~sp~--ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~-------- 875 (1205)
T KOG0606|consen 806 FEITKPSQSGSPS--SSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPC-------- 875 (1205)
T ss_pred ceecccccCCCCc--ccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCC--------
Confidence 44555555555 5 6666666666644444443321100 0112222222222333345655555444221
Q ss_pred ccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcc
Q 004157 99 KITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVL 176 (771)
Q Consensus 99 ~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla 176 (771)
....|++++|+ ++|...|...+...... ..-++..+..++++||. ..++|+|++|.|++...+|..++.+|+..
T Consensus 876 rsP~~L~~~~~~~~~~~Skl~~~~~~saep---aRs~i~~~vqs~e~L~s-~~r~h~~~~p~~~l~~~~gh~~l~~~~t~ 951 (1205)
T KOG0606|consen 876 RSPLPLVGHYLNGGDLPSKLHNSGCLSAEP---ARSPILERVQSLESLHS-SLRKHRDLKPDSLLIAYDGHRPLTDFGTL 951 (1205)
T ss_pred CCCcchhhHHhccCCchhhhhcCCCccccc---ccchhHHHHhhhhcccc-chhhcccccccchhhcccCCcccCccccc
Confidence 34789999999 67888887765222111 12237788999999996 66899999999999999999999999854
Q ss_pred cccCCCCC-------CCC------------------CCccccccccCCCCCChhccccccccccCCCCCcchHHHHHHHH
Q 004157 177 SEFDGNNE-------AAN------------------GPMLQYAWLVGAQYKPVELAKSDWTAVRKSPPWSIDSWGLGCLI 231 (771)
Q Consensus 177 ~~~~~~~~-------~~~------------------~~~~~~~~~~~~~Y~aPE~~~~~~~~~~~~~~~~~Di~SLG~li 231 (771)
........ ... ..........++.|.+||...+ ......+|.|++|+.+
T Consensus 952 ~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg------~~hgs~ad~~~~g~~l 1025 (1205)
T KOG0606|consen 952 SKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLG------RRHGSAADWWSSGVCL 1025 (1205)
T ss_pred cccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCccccc------ccCCCcchhhhhhhhh
Confidence 43221100 000 0011222344568999999887 3566789999999999
Q ss_pred HHHhhCCCCCChhhhhcc---------------CCCCcchHHHHHHHhccCCCCCCChH---HHhhCCCCCcchhh
Q 004157 232 YELFSGMRLSKTEELRNT---------------ASIPKSLLPDYQRLLSSMPSRRLNSS---KLIENSEYFQNKLV 289 (771)
Q Consensus 232 ~el~~g~~p~~~~~l~~~---------------~~IP~~l~~~i~~lL~~~P~~Rps~~---~lL~~~~fF~n~lv 289 (771)
+|.++|.++|+...-.++ ..++...++++.+++..++.+|..+. +.- ...||+..-.
T Consensus 1026 ~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k-~~~~~~~~~~ 1100 (1205)
T KOG0606|consen 1026 FEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVK-GHPFFQDVDW 1100 (1205)
T ss_pred hhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccc-cCCccCCCCc
Confidence 999999999876543221 23455688888999999999999875 433 3478865433
No 447
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.45 E-value=1.8e-06 Score=84.79 Aligned_cols=127 Identities=14% Similarity=0.142 Sum_probs=87.9
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------hHHHHHHHHHHHHhcCCCCCe--eEEeeeEEecccCcC
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------GHLAAARNGVKRLRTVRHPNI--LAFLHSTEVENIDAT 96 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~------~~~~~~~~ei~~Lk~LrHPnI--lkv~d~~e~e~~d~~ 96 (771)
.+.+|. . .+|.+... |.+|.+|.=-.+.-.. -....-++|+++|.+++--+| ..++++..
T Consensus 3 ~i~~GAEa--~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~------- 71 (204)
T COG3642 3 LIKQGAEA--IIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDP------- 71 (204)
T ss_pred hhhCCcce--eEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcC-------
Confidence 355666 5 67777553 5567677644432221 224456789999999875443 33444332
Q ss_pred CcccEEEEEecCC-c-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccC
Q 004157 97 STKITIYIVTEPV-M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFD 174 (771)
Q Consensus 97 ~~~~~iyIVtE~v-~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFg 174 (771)
....|+|||+ + .|.+.|.... ... +..|-.-+.-||. ++|+||||.++||.++..+ +.++|||
T Consensus 72 ---~~~~I~me~I~G~~lkd~l~~~~------~~~----~r~vG~~vg~lH~-~givHGDLTtsNiIl~~~~-i~~IDfG 136 (204)
T COG3642 72 ---DNGLIVMEYIEGELLKDALEEAR------PDL----LREVGRLVGKLHK-AGIVHGDLTTSNIILSGGR-IYFIDFG 136 (204)
T ss_pred ---CCCEEEEEEeCChhHHHHHHhcc------hHH----HHHHHHHHHHHHh-cCeecCCCccceEEEeCCc-EEEEECC
Confidence 2568999999 3 4777777651 222 7778888888996 9999999999999997666 9999999
Q ss_pred cccc
Q 004157 175 VLSE 178 (771)
Q Consensus 175 la~~ 178 (771)
+...
T Consensus 137 Lg~~ 140 (204)
T COG3642 137 LGEF 140 (204)
T ss_pred cccc
Confidence 9864
No 448
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.45 E-value=1.1e-06 Score=89.60 Aligned_cols=140 Identities=16% Similarity=0.168 Sum_probs=91.5
Q ss_pred CceEEEEeEECCCCCcEEEEEEeCCCCch-----hHHHHHHHHHHHHhcCCCCC--eeEEeeeEEecccCcCCcccEEEE
Q 004157 32 GSWSHFQGTSKDDGSPVSIFSISGTNAQD-----GHLAAARNGVKRLRTVRHPN--ILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 32 g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-----~~~~~~~~ei~~Lk~LrHPn--Ilkv~d~~e~e~~d~~~~~~~iyI 104 (771)
+.|.+..+.....++.+-+|.+....... -....+.+|++.+..|+.-+ +.+.+.+.+... ++ ....||
T Consensus 19 ~~~~~~~~~~~~~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~--~~--~~~s~l 94 (206)
T PF06293_consen 19 GGWFGVQRVVDLVGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRK--GG--GYRSYL 94 (206)
T ss_pred eEEEEEEccccccceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcC--CC--ceeEEE
Confidence 44544433323345566666544322221 12345778888888876333 455555555422 11 245689
Q ss_pred EecCCc---chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCC---cEEEEccCcccc
Q 004157 105 VTEPVM---PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTL---DWKLHAFDVLSE 178 (771)
Q Consensus 105 VtE~v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G---~~KL~dFgla~~ 178 (771)
|||++. +|.+++.......... ....+.+++..+.-||. +|++|+|+++.||||+.++ .+.|+||+-++.
T Consensus 95 ite~l~~~~~L~~~~~~~~~~~~~~---~~~ll~~l~~~i~~lH~-~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 95 ITEALPGAQDLRDLLQQWEQLDPSQ---RRELLRALARLIAKLHD-AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred EEEeCCCcccHHHHHHhhcccchhh---HHHHHHHHHHHHHHHHH-CcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999983 6888888743222222 23348999999999996 9999999999999999988 899999998765
Q ss_pred c
Q 004157 179 F 179 (771)
Q Consensus 179 ~ 179 (771)
.
T Consensus 171 ~ 171 (206)
T PF06293_consen 171 R 171 (206)
T ss_pred C
Confidence 4
No 449
>KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms]
Probab=98.45 E-value=1.4e-06 Score=102.86 Aligned_cols=190 Identities=19% Similarity=0.243 Sum_probs=152.3
Q ss_pred hhhhcCCChhhhhhhhHHHHHHHHhcCCCCchhhHHHH---HhccC----CChhhhhhhhHHHHHHhhcCCcHHHHHHHH
Q 004157 314 PNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALL---KMGSW----LSTEEFSVKVLPTIVKLFASNDRAIRVALL 386 (771)
Q Consensus 314 ~~~l~~fP~~~~~~kILP~Ll~~~~~~~~~~~~L~~ll---~i~~~----l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL 386 (771)
..+.+.+|..-...-++|.++..++... +-+...+. ..... ...+..++..+|.|..+-....|++|..++
T Consensus 423 ~~~~p~~~k~~ti~~llp~~~~~l~de~--~~V~lnli~~ls~~~~v~~v~g~~~~s~slLp~i~el~~d~~wRvr~ail 500 (759)
T KOG0211|consen 423 TGLSPILPKERTISELLPLLIGNLKDED--PIVRLNLIDKLSLLEEVNDVIGISTVSNSLLPAIVELAEDLLWRVRLAIL 500 (759)
T ss_pred cccCccCCcCcCccccChhhhhhcchhh--HHHHHhhHHHHHHHHhccCcccchhhhhhhhhhhhhhccchhHHHHHHHH
Confidence 3445556655555666777776554322 22222222 22222 233667788899999996666799999999
Q ss_pred HhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCCcchhhHHHH
Q 004157 387 QHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTIL 466 (771)
Q Consensus 387 ~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~ic 466 (771)
++++.....+..+.++++.-+.+..++.|....||+++.+.++.++..++..+-..+++|.+.....++...+|..++.|
T Consensus 501 ~~ip~la~q~~~~~~~~~~~~l~~~~l~d~v~~Ir~~aa~~l~~l~~~~G~~w~~~~~i~k~L~~~~q~~y~~R~t~l~s 580 (759)
T KOG0211|consen 501 EYIPQLALQLGVEFFDEKLAELLRTWLPDHVYSIREAAARNLPALVETFGSEWARLEEIPKLLAMDLQDNYLVRMTTLFS 580 (759)
T ss_pred HHHHHHHHhhhhHHhhHHHHHHHHhhhhhhHHHHHHHHHHHhHHHHHHhCcchhHHHhhHHHHHHhcCcccchhhHHHHH
Confidence 99999999999999999988999999999999999999999999999999888888899988888887789999999999
Q ss_pred HHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 467 LGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 467 l~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
|.-|++.++++...+.|+|.|. .+.+|+.+.+|+-++..
T Consensus 581 i~~la~v~g~ei~~~~Llp~~~-~l~~D~vanVR~nvak~ 619 (759)
T KOG0211|consen 581 IHELAEVLGQEITCEDLLPVFL-DLVKDPVANVRINVAKH 619 (759)
T ss_pred HHHHHHHhccHHHHHHHhHHHH-HhccCCchhhhhhHHHH
Confidence 9999999999988888999999 99999999999888776
No 450
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.40 E-value=2.8e-06 Score=83.08 Aligned_cols=142 Identities=15% Similarity=0.046 Sum_probs=95.4
Q ss_pred ecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch------hHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCc
Q 004157 23 IGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD------GHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDA 95 (771)
Q Consensus 23 i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~------~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~ 95 (771)
..+.+.+|. + .|+.+.. .|+.+.||.-..+.-+. -...+.++|.+.|.+++--+|.--.=++.+..
T Consensus 11 ~l~likQGAEA--rv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~--- 83 (229)
T KOG3087|consen 11 SLELIKQGAEA--RVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY--- 83 (229)
T ss_pred cceeeecccee--eEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC---
Confidence 344566777 7 8899876 48898888654332221 12455678999999987545433222232222
Q ss_pred CCcccEEEEEecCC-c--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc-E--E
Q 004157 96 TSTKITIYIVTEPV-M--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD-W--K 169 (771)
Q Consensus 96 ~~~~~~iyIVtE~v-~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~-~--K 169 (771)
.-.|+||++ + .+.+++...-..... .....-.+.+|-+.+.-||. ++++||||..+||++..+|. | .
T Consensus 84 -----~~~i~ME~~~g~~~vk~~i~~~~~~~~~-d~~~~~~~~~iG~~igklH~-ndiiHGDLTTSNill~~~~~~~~~~ 156 (229)
T KOG3087|consen 84 -----GGQIYMEFIDGASTVKDFILSTMEDESE-DEGLAELARRIGELIGKLHD-NDIIHGDLTTSNILLRSDGNQITPI 156 (229)
T ss_pred -----CCeEEEEeccchhHHHHHHHHHccCccc-chhHHHHHHHHHHHHHHhhh-CCeecccccccceEEecCCCcCceE
Confidence 238899999 4 477777664332222 22223348889999999995 99999999999999987654 5 8
Q ss_pred EEccCcccc
Q 004157 170 LHAFDVLSE 178 (771)
Q Consensus 170 L~dFgla~~ 178 (771)
|+|||++..
T Consensus 157 lIdfgls~~ 165 (229)
T KOG3087|consen 157 LIDFGLSSV 165 (229)
T ss_pred EEeecchhc
Confidence 999999754
No 451
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.39 E-value=2.5e-06 Score=88.52 Aligned_cols=136 Identities=15% Similarity=0.116 Sum_probs=95.6
Q ss_pred ceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC--------CCch------------hHHHHHHHHHHHHhcCCCC
Q 004157 21 YNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT--------NAQD------------GHLAAARNGVKRLRTVRHP 79 (771)
Q Consensus 21 Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~--------~~~~------------~~~~~~~~ei~~Lk~LrHP 79 (771)
+.++++||.|- + .||.|.+. .|.+++||.-... ...+ -....+++|++.|.+|.--
T Consensus 93 e~iG~~IGvGKEs--dVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~ 169 (304)
T COG0478 93 EAIGTKIGVGKES--DVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE 169 (304)
T ss_pred HhhccccccCccc--eEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc
Confidence 56788999998 8 99999976 6899999975521 0000 1245678999999999755
Q ss_pred --CeeEEeeeEEecccCcCCcccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCC
Q 004157 80 --NILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155 (771)
Q Consensus 80 --nIlkv~d~~e~e~~d~~~~~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dI 155 (771)
.|.+.++.- .-.+|||++. +|... .. .......+ +..|+.-+.-+-. +|+||||+
T Consensus 170 G~~VP~P~~~n------------RHaVvMe~ieG~eL~~~----r~-~~en~~~i---l~~il~~~~~~~~-~GiVHGDl 228 (304)
T COG0478 170 GVKVPKPIAWN------------RHAVVMEYIEGVELYRL----RL-DVENPDEI---LDKILEEVRKAYR-RGIVHGDL 228 (304)
T ss_pred CCCCCCccccc------------cceeeeehcccceeecc----cC-cccCHHHH---HHHHHHHHHHHHH-cCccccCC
Confidence 566766543 3489999993 44321 11 11112222 5555555555553 89999999
Q ss_pred CCCCEEEcCCCcEEEEccCcccccC
Q 004157 156 CLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 156 kp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
++-||+|+++|.+.++||--+....
T Consensus 229 SefNIlV~~dg~~~vIDwPQ~v~~~ 253 (304)
T COG0478 229 SEFNILVTEDGDIVVIDWPQAVPIS 253 (304)
T ss_pred chheEEEecCCCEEEEeCcccccCC
Confidence 9999999999999999998776554
No 452
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.38 E-value=8.4e-07 Score=90.53 Aligned_cols=76 Identities=13% Similarity=0.047 Sum_probs=50.2
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCC--CeeEEeeeEEecccCcCCcccE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHP--NILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHP--nIlkv~d~~e~e~~d~~~~~~~ 101 (771)
+.++.|. + .+|+++.. +|+.+++|+....... .....+.+|++.++.|++. .+.+++.+...... ...
T Consensus 4 ~~l~~G~~n--~~~~v~~~-~g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~-----~~~ 74 (223)
T cd05154 4 RQLSGGQSN--LTYLLTAG-GGRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSV-----LGT 74 (223)
T ss_pred eecCCCccc--eEEEEEec-CCcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCc-----cCC
Confidence 3566665 6 78998865 3689999997653221 1234678899999999763 35666666543210 125
Q ss_pred EEEEecCC
Q 004157 102 IYIVTEPV 109 (771)
Q Consensus 102 iyIVtE~v 109 (771)
.|+|||++
T Consensus 75 ~~~v~e~i 82 (223)
T cd05154 75 PFYVMERV 82 (223)
T ss_pred ceEEEEEe
Confidence 68999999
No 453
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.27 E-value=6.5e-06 Score=87.33 Aligned_cols=136 Identities=10% Similarity=0.116 Sum_probs=88.2
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCchhHHH----------HHHHHHHHHhcCCCCCe--eEEeeeEEecccCcCCcccEE
Q 004157 35 SHFQGTSKDDGSPVSIFSISGTNAQDGHLA----------AARNGVKRLRTVRHPNI--LAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 35 tVy~g~~k~~g~~VaIK~~~~~~~~~~~~~----------~~~~ei~~Lk~LrHPnI--lkv~d~~e~e~~d~~~~~~~i 102 (771)
.|++... .|+.|.||.+......+ ..+ .+.+|++.+.+|+.-+| ...+.+.+... + + ....-
T Consensus 37 rvvr~~~--~g~~~~vKr~~~~~~~~-~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~-~-~-~~~~s 110 (268)
T PRK15123 37 RTLRFEL--AGKSYFLKWHRGTGWGE-IFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGS-N-P-ATRTS 110 (268)
T ss_pred eEEEEEE--CCEEEEEEEecCCcHHH-HhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecC-C-C-cccee
Confidence 4556654 47789999875432111 111 37789888888853333 33344443211 1 0 01246
Q ss_pred EEEecCCc---chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcC-------CCcEEEEc
Q 004157 103 YIVTEPVM---PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQ-------TLDWKLHA 172 (771)
Q Consensus 103 yIVtE~v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~-------~G~~KL~d 172 (771)
|||||++. +|.+++...... ..........+.+|+..+.-||. +|++|||+++.||+++. ++.+.|+|
T Consensus 111 ~LVte~l~~~~sL~~~~~~~~~~-~~~~~~~~~ll~~la~~i~~LH~-~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LID 188 (268)
T PRK15123 111 FIITEDLAPTISLEDYCADWATN-PPDPRLKRMLIKRVATMVRDMHA-AGINHRDCYICHFLLHLPFPGREEDLKLSVID 188 (268)
T ss_pred EEEEeeCCCCccHHHHHHhhccc-CCCHHHHHHHHHHHHHHHHHHHH-CcCccCCCChhhEEEeccccCCCCCceEEEEE
Confidence 89999993 588887643211 11122233448999999999996 99999999999999975 46799999
Q ss_pred cCcccc
Q 004157 173 FDVLSE 178 (771)
Q Consensus 173 Fgla~~ 178 (771)
|+.+..
T Consensus 189 l~r~~~ 194 (268)
T PRK15123 189 LHRAQI 194 (268)
T ss_pred CCcccc
Confidence 998753
No 454
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.24 E-value=3.3e-06 Score=96.56 Aligned_cols=181 Identities=13% Similarity=0.150 Sum_probs=160.8
Q ss_pred hhhhhHHHHHHHHhcCCC--CchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhh
Q 004157 325 VLKKLLPLLASALEFGSA--AAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVD 402 (771)
Q Consensus 325 ~~~kILP~Ll~~~~~~~~--~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~ 402 (771)
...+|+|.|++.|...+. ....|.-+.+....|+.+.+...|+|.+..-|.+.+..+|-.-|..|..++.+|+++.++
T Consensus 327 yq~~i~p~l~kLF~~~Dr~iR~~LL~~i~~~i~~Lt~~~~~d~I~phv~~G~~DTn~~Lre~Tlksm~~La~kL~~~~Ln 406 (690)
T KOG1243|consen 327 YQVRIIPVLLKLFKSPDRQIRLLLLQYIEKYIDHLTKQILNDQIFPHVALGFLDTNATLREQTLKSMAVLAPKLSKRNLN 406 (690)
T ss_pred cccchhhhHHHHhcCcchHHHHHHHHhHHHHhhhcCHHhhcchhHHHHHhhcccCCHHHHHHHHHHHHHHHhhhchhhhc
Confidence 778899999999987654 334566788999999999999999999999999999999999999999999999999999
Q ss_pred hccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHH
Q 004157 403 EQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRV 482 (771)
Q Consensus 403 ~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~v 482 (771)
..++-+|..+=.|....||.-|.-.+-.+.+.|.....++-|.-.+.+-..|+.+.=|..+..-+.....++..++...-
T Consensus 407 ~Ellr~~ar~q~d~~~~irtntticlgki~~~l~~~~R~~vL~~aftralkdpf~paR~a~v~~l~at~~~~~~~~va~k 486 (690)
T KOG1243|consen 407 GELLRYLARLQPDEHGGIRTNTTICLGKIAPHLAASVRKRVLASAFTRALKDPFVPARKAGVLALAATQEYFDQSEVANK 486 (690)
T ss_pred HHHHHHHHhhCccccCcccccceeeecccccccchhhhccccchhhhhhhcCCCCCchhhhhHHHhhcccccchhhhhhh
Confidence 99999999999999999999999999999999988776655555566656799999999999999999999998877777
Q ss_pred hHHHHHHhhhcCCCcchhhheeee
Q 004157 483 LINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 483 L~~af~~~~lkD~f~~~R~a~l~a 506 (771)
++|... -.+.|+...+|--|..+
T Consensus 487 Ilp~l~-pl~vd~e~~vr~~a~~~ 509 (690)
T KOG1243|consen 487 ILPSLV-PLTVDPEKTVRDTAEKA 509 (690)
T ss_pred cccccc-ccccCcccchhhHHHHH
Confidence 788888 78999999999877665
No 455
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.17 E-value=3.3e-05 Score=83.97 Aligned_cols=236 Identities=15% Similarity=0.128 Sum_probs=137.6
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCc
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNILAFLHSTEVENIDATST 98 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~ 98 (771)
+-..++.+|+|+ + .+|..-. -+ .+.-|++.....-.. .+.-....+.=.||-+-.-+ .+-.+.-.|+.-
T Consensus 12 ~i~~gr~LgqGgea--~ly~l~e--~~-d~VAKIYh~Pppa~~----aqk~a~la~~p~~p~~~~rv-aWPqa~L~G~~~ 81 (637)
T COG4248 12 PIPPGRPLGQGGEA--DLYTLGE--VR-DQVAKIYHAPPPAAQ----AQKVAELAATPDAPLLNYRV-AWPQATLHGGRR 81 (637)
T ss_pred ccCCCccccCCccc--eeeecch--hh-chhheeecCCCchHH----HHHHHHhccCCCCcchhhhh-cccHHHhhCCCc
Confidence 345677888887 4 4554321 12 234588876432211 11111222333566433211 111111111111
Q ss_pred ccEEEEEecCC---cchHHHHHHh---CCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEc
Q 004157 99 KITIYIVTEPV---MPLSEKIKEL---GLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHA 172 (771)
Q Consensus 99 ~~~iyIVtE~v---~~L~~~L~~~---~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~d 172 (771)
...+.+.|..+ .+...++.-. .......-.++.+..+.|+.+..-||+ .|.+-||++++|++|++++.+.|.|
T Consensus 82 ~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~-~Gh~vGDVn~~~~lVsd~~~V~LVd 160 (637)
T COG4248 82 GKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE-HGHVVGDVNQNSFLVSDDSKVVLVD 160 (637)
T ss_pred cceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh-cCCcccccCccceeeecCceEEEEc
Confidence 34588999988 3555555322 122223345566678899999999997 8999999999999999999999998
Q ss_pred cCcccccCCCCCCCCCCccccccccCCCCCChhccc-cccccccCCCCCcchHHHHHHHHHHHhhC-CCCCChhhh----
Q 004157 173 FDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAK-SDWTAVRKSPPWSIDSWGLGCLIYELFSG-MRLSKTEEL---- 246 (771)
Q Consensus 173 Fgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~-~~~~~~~~~~~~~~Di~SLG~li~el~~g-~~p~~~~~l---- 246 (771)
=+--.. ... ......-++...|.|||... +.+.. ..-....|.|+||+||++++.| ..||..-..
T Consensus 161 sDsfqi-~~n------g~~~~cpVg~~eftPPElQ~~~sf~g--~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~a 231 (637)
T COG4248 161 SDSFQI-NAN------GTLHLCPVGVSEFTPPELQTLPSFVG--FERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDA 231 (637)
T ss_pred ccceee-ccC------CceEecccCccccCCHHHhccccccc--cCCCccccchhHHHHHHHHHhcCCCCCCcccccCCC
Confidence 543211 111 11111223334899999976 22211 2234568999999999999887 566532110
Q ss_pred ------------------hc-----------cCCCCcchHHHHHHHhcc--CCCCCCChH
Q 004157 247 ------------------RN-----------TASIPKSLLPDYQRLLSS--MPSRRLNSS 275 (771)
Q Consensus 247 ------------------~~-----------~~~IP~~l~~~i~~lL~~--~P~~Rps~~ 275 (771)
.. ..-+|.++..++.+|+.. ++.-|||++
T Consensus 232 p~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~ 291 (637)
T COG4248 232 PNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK 291 (637)
T ss_pred CCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH
Confidence 00 023567788888888864 477999975
No 456
>KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms]
Probab=98.16 E-value=2.5e-05 Score=92.56 Aligned_cols=187 Identities=20% Similarity=0.163 Sum_probs=150.8
Q ss_pred CCChhhhhhhhHHHHHHHHhcCC--CCchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhc
Q 004157 319 QLPRQIVLKKLLPLLASALEFGS--AAAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSF 396 (771)
Q Consensus 319 ~fP~~~~~~kILP~Ll~~~~~~~--~~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l 396 (771)
..-.....+-.||.+.+..+... ....++.-+=..+..+-.+-|..+..+.+.....+....||=....+|+.++..+
T Consensus 470 v~g~~~~s~slLp~i~el~~d~~wRvr~ail~~ip~la~q~~~~~~~~~~~~l~~~~l~d~v~~Ir~~aa~~l~~l~~~~ 549 (759)
T KOG0211|consen 470 VIGISTVSNSLLPAIVELAEDLLWRVRLAILEYIPQLALQLGVEFFDEKLAELLRTWLPDHVYSIREAAARNLPALVETF 549 (759)
T ss_pred cccchhhhhhhhhhhhhhccchhHHHHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhhhhhhHHHHHHHHHHHhHHHHHHh
Confidence 33344555666777666554321 1111222111122222233344445566666666677899999999999999999
Q ss_pred ChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCc
Q 004157 397 SAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNE 476 (771)
Q Consensus 397 ~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~ 476 (771)
+.+--...+.|.++.+..+.+...|-.++-++..+++.++.+....+|||.+..+..|+.+.||.|.+.-|-+|.++|..
T Consensus 550 G~~w~~~~~i~k~L~~~~q~~y~~R~t~l~si~~la~v~g~ei~~~~Llp~~~~l~~D~vanVR~nvak~L~~i~~~L~~ 629 (759)
T KOG0211|consen 550 GSEWARLEEIPKLLAMDLQDNYLVRMTTLFSIHELAEVLGQEITCEDLLPVFLDLVKDPVANVRINVAKHLPKILKLLDE 629 (759)
T ss_pred CcchhHHHhhHHHHHHhcCcccchhhHHHHHHHHHHHHhccHHHHHHHhHHHHHhccCCchhhhhhHHHHHHHHHhhcch
Confidence 98888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 477 GTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 477 ~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
+.+.+.+.|+.- ...+|+...+|.+|+.|
T Consensus 630 ~~~~~~v~pll~-~L~~d~~~dvr~~a~~a 658 (759)
T KOG0211|consen 630 SVRDEEVLPLLE-TLSSDQELDVRYRAILA 658 (759)
T ss_pred HHHHHHHHHHHH-HhccCcccchhHHHHHH
Confidence 999999999999 89999999999999999
No 457
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.16 E-value=8.1e-06 Score=93.80 Aligned_cols=170 Identities=15% Similarity=0.164 Sum_probs=126.9
Q ss_pred CCChhhhhhhhHHHHHHHHhcCCC---CchhhHHHHHhccCCChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhh
Q 004157 319 QLPRQIVLKKLLPLLASALEFGSA---AAPALTALLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQS 395 (771)
Q Consensus 319 ~fP~~~~~~kILP~Ll~~~~~~~~---~~~~L~~ll~i~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~ 395 (771)
..+..-...+++|.|...++.... ...++..+=.|.++++.++|.++|+|.|...|...|++|.-.+|+.++.+.+.
T Consensus 340 ~~s~~~~~~~~~p~l~pi~~~~~~~~~~l~i~e~mdlL~~Kt~~e~~~~~IlplL~~S~~~~~~~iQ~~~L~~lptv~e~ 419 (700)
T KOG2137|consen 340 GLSQNEFGPKMLPALKPIYSASDPKQALLFILENMDLLKEKTPPEEVKEKILPLLYRSLEDSDVQIQELALQILPTVAES 419 (700)
T ss_pred ccchhhhhhhhhHHHHHHhccCCcccchhhHHhhHHHHHhhCChHHHHHHHHHHHHHHhcCcchhhHHHHHHhhhHHHHh
Confidence 345555677888888888875221 12223333347788999999999999999999999999999999999999999
Q ss_pred cChhhhhhccHHHHHhh-cCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccC-CCCcchhhHHHHHHHhhhc
Q 004157 396 FSAQVVDEQVYPHVATG-FADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVD-EEPAIRTNTTILLGNIASH 473 (771)
Q Consensus 396 l~~~~v~~~I~p~l~~g-f~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D-~~~~IRtnt~icl~kia~~ 473 (771)
++-..|++.|+|.+... |..++..++-.+|-++-.++..++.-.+..+++|+++..+.+ +..-.++-.+.-..-+-.+
T Consensus 420 iD~~~vk~~ilP~l~~l~~~tt~~~vkvn~L~c~~~l~q~lD~~~v~d~~lpi~~~~~~~dp~iv~~~~~i~~~l~~~~~ 499 (700)
T KOG2137|consen 420 IDVPFVKQAILPRLKNLAFKTTNLYVKVNVLPCLAGLIQRLDKAAVLDELLPILKCIKTRDPAIVMGFLRIYEALALIIY 499 (700)
T ss_pred ccHHHHHHHHHHHhhcchhcccchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHhhcc
Confidence 99999999999998765 556678999999999999999999999999999999999774 3333332222222222233
Q ss_pred cCcchhhHHhHHHHH
Q 004157 474 LNEGTRKRVLINAFT 488 (771)
Q Consensus 474 L~~~~~~~vL~~af~ 488 (771)
.+++...+.++|..-
T Consensus 500 ~g~ev~~~~VlPlli 514 (700)
T KOG2137|consen 500 SGVEVMAENVLPLLI 514 (700)
T ss_pred cceeeehhhhhhhhh
Confidence 334555555555544
No 458
>PRK09902 hypothetical protein; Provisional
Probab=98.09 E-value=4.1e-05 Score=77.68 Aligned_cols=137 Identities=10% Similarity=0.032 Sum_probs=89.5
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCc----hhHHHHHHHHHHHHhcCCCC--CeeEEeeeEEecccCcCCcccEEEEEecC
Q 004157 35 SHFQGTSKDDGSPVSIFSISGTNAQ----DGHLAAARNGVKRLRTVRHP--NILAFLHSTEVENIDATSTKITIYIVTEP 108 (771)
Q Consensus 35 tVy~g~~k~~g~~VaIK~~~~~~~~----~~~~~~~~~ei~~Lk~LrHP--nIlkv~d~~e~e~~d~~~~~~~iyIVtE~ 108 (771)
.|+.-... |..+-+|.-...... .--...+.+|+..|++|..- .+.+++ +++... +++ ...-+||||.
T Consensus 33 gV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k-~~~--~~rA~LVTe~ 106 (216)
T PRK09902 33 GVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVK-IEG--EWRALLVTED 106 (216)
T ss_pred eEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeec-cCC--ceEEEEEEEe
Confidence 57775542 445666654411100 11245788899999988632 255655 333211 111 3467999998
Q ss_pred Cc---chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc--EEEEccCccccc
Q 004157 109 VM---PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD--WKLHAFDVLSEF 179 (771)
Q Consensus 109 v~---~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~--~KL~dFgla~~~ 179 (771)
++ +|.+++.+....... ...-..++.+|+.+|.-||. .|+.|+|+.+.||+++..|. ++|+||+-++..
T Consensus 107 L~g~~~L~~~l~~~~~~~~~-~~~k~~il~~va~~ia~LH~-~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 107 MAGFISIADWYAQHAVSPYS-DEVRQAMLKAVALAFKKMHS-VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred CCCCccHHHHHhcCCcCCcc-hHHHHHHHHHHHHHHHHHHH-CCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 84 688888765432111 11112338999999999995 99999999999999987777 999999987654
No 459
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.93 E-value=3.8e-05 Score=79.09 Aligned_cols=128 Identities=15% Similarity=0.159 Sum_probs=86.2
Q ss_pred EEEEeEECCCCCcEEEEEEeCCCCc----------------------hhHHHHHHHHHHHHhcCCCC--CeeEEeeeEEe
Q 004157 35 SHFQGTSKDDGSPVSIFSISGTNAQ----------------------DGHLAAARNGVKRLRTVRHP--NILAFLHSTEV 90 (771)
Q Consensus 35 tVy~g~~k~~g~~VaIK~~~~~~~~----------------------~~~~~~~~~ei~~Lk~LrHP--nIlkv~d~~e~ 90 (771)
+||.|.. .++..|+||+|...... .....=.++|++.|+++..- .+.+-+.+..
T Consensus 63 ~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~Pi~~~~- 140 (268)
T COG1718 63 NVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPEPIAFRN- 140 (268)
T ss_pred EEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCCceeecC-
Confidence 8999986 47899999999843110 01122356899999998633 3445555443
Q ss_pred cccCcCCcccEEEEEecCCcc---hHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc
Q 004157 91 ENIDATSTKITIYIVTEPVMP---LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (771)
Q Consensus 91 e~~d~~~~~~~iyIVtE~v~~---L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~ 167 (771)
-.+|||+++. -.-.|+........ ......++++.+.-|-..+++|||||+.=||++. +|.
T Consensus 141 -----------nVLvMEfIg~~g~pAP~LkDv~~e~~e----~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~ 204 (268)
T COG1718 141 -----------NVLVMEFIGDDGLPAPRLKDVPLELEE----AEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGE 204 (268)
T ss_pred -----------CeEEEEeccCCCCCCCCcccCCcCchh----HHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCe
Confidence 2899999952 11122222221111 1122667888888887669999999999999998 888
Q ss_pred EEEEccCcccccC
Q 004157 168 WKLHAFDVLSEFD 180 (771)
Q Consensus 168 ~KL~dFgla~~~~ 180 (771)
..++||+-+....
T Consensus 205 p~iID~~QaV~~~ 217 (268)
T COG1718 205 PYIIDVSQAVTID 217 (268)
T ss_pred EEEEECccccccC
Confidence 9999999887654
No 460
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=97.68 E-value=0.00015 Score=83.50 Aligned_cols=140 Identities=16% Similarity=0.107 Sum_probs=82.6
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc--------------------------------hhHHH------H
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ--------------------------------DGHLA------A 65 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~--------------------------------~~~~~------~ 65 (771)
+.++.++ | .||+|+.+ +|+.|+||+....... ++..+ .
T Consensus 131 ~PiAsASIa--QVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElD 207 (517)
T COG0661 131 EPIASASIA--QVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELD 207 (517)
T ss_pred CchhhhhHh--hheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhC
Confidence 3455665 6 99999988 4999999998842100 00011 1
Q ss_pred HHHHHHHHhcCC----CCCeeEEeeeEEecccCcCCcccEEEEEecCCc--chHHH--HHHhCCCCCCcHHHHHHHHHHH
Q 004157 66 ARNGVKRLRTVR----HPNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEK--IKELGLEGSQRDEYYAWGLNQI 137 (771)
Q Consensus 66 ~~~ei~~Lk~Lr----HPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v~--~L~~~--L~~~~~~~~~~~~~i~~gl~QI 137 (771)
+++|...+.+++ +..=+.+=.++.+-+ +.-.++|||+. ++.+. ++..+.. ... +..-+.++
T Consensus 208 y~~EA~n~~~~~~nf~~~~~v~VP~V~we~t-------~~~VLtmE~i~Gi~i~d~~~l~~~g~d---~k~-ia~~~~~~ 276 (517)
T COG0661 208 YRREAANAERFRENFKDDPDVYVPKVYWEYT-------TRRVLTMEWIDGIKISDIAALKSAGID---RKE-LAELLVRA 276 (517)
T ss_pred HHHHHHHHHHHHHHcCCCCCeEeceeehhcc-------CCcEEEEEeeCCEecccHHHHHhcCCC---HHH-HHHHHHHH
Confidence 344555555543 222233333332211 24589999993 57665 4443332 122 21112222
Q ss_pred HHHHHHHHcCCCceecCCCCCCEEEcCCCcEEEEccCcccccCC
Q 004157 138 AKAVSFLNNDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 138 ~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~~~ 181 (771)
.----| + .|+.|+|.+|.||+|+.+|.+.+.|||+......
T Consensus 277 f~~q~~-~--dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 277 FLRQLL-R--DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHHH-h--cCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 211112 2 4799999999999999999999999999876643
No 461
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.65 E-value=0.00019 Score=82.49 Aligned_cols=136 Identities=12% Similarity=0.111 Sum_probs=84.2
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCc--------------------------------------h-hHHHH
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQ--------------------------------------D-GHLAA 65 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~--------------------------------------~-~~~~~ 65 (771)
.|+..+ + .||+|+.+. |+.|+||+-+..-.. + .....
T Consensus 168 piaaASla--QVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E 244 (538)
T KOG1235|consen 168 PIAAASLA--QVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE 244 (538)
T ss_pred hhhhcchh--heEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence 445444 6 999999885 999999997732100 0 11233
Q ss_pred HHHHHHHHhcCCCCC------eeEEeeeEEecccCcCCcccEEEEEecCCc--chH--HHHHHhCCCCCCcHHHHHHHHH
Q 004157 66 ARNGVKRLRTVRHPN------ILAFLHSTEVENIDATSTKITIYIVTEPVM--PLS--EKIKELGLEGSQRDEYYAWGLN 135 (771)
Q Consensus 66 ~~~ei~~Lk~LrHPn------Ilkv~d~~e~e~~d~~~~~~~iyIVtE~v~--~L~--~~L~~~~~~~~~~~~~i~~gl~ 135 (771)
++|.-+..+.++|-+ |.++|-.+. +.-.++||||. ++. +.|++.+.... + |..-+.
T Consensus 245 A~Nae~~~~~f~~~~~~~~V~VP~Vy~~~s----------t~RVLtME~~~G~~i~Dl~~i~~~gi~~~---~-i~~~l~ 310 (538)
T KOG1235|consen 245 AKNAERFRENFKDFSLLTYVLVPKVYWDLS----------TKRVLTMEYVDGIKINDLDAIDKRGISPH---D-ILNKLV 310 (538)
T ss_pred HHhHHHHHHHHHhcccccceeCCeehhhcC----------cceEEEEEecCCccCCCHHHHHHcCCCHH---H-HHHHHH
Confidence 445555555556666 444554332 25699999993 332 56666655322 2 211122
Q ss_pred HHHHHHHHHHcCCCceecCCCCCCEEEcC----CCcEEEEccCcccccCC
Q 004157 136 QIAKAVSFLNNDCKLVHGNVCLSSVVVTQ----TLDWKLHAFDVLSEFDG 181 (771)
Q Consensus 136 QI~~aL~fLH~~~~ivH~dIkp~NI~v~~----~G~~KL~dFgla~~~~~ 181 (771)
+...-+-|. .|++|+|=+|.||+|+. ++++.|-|||+......
T Consensus 311 ~~~~~qIf~---~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 311 EAYLEQIFK---TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HHHHHHHHh---cCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 322223333 36999999999999994 67899999999876643
No 462
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=97.59 E-value=0.00037 Score=83.74 Aligned_cols=252 Identities=20% Similarity=0.244 Sum_probs=171.1
Q ss_pred hHHHHHHHhc--cCCCCCCChHHHhhCCCCCcc---hhhhhhhhhhhhccCCh-hhHHhhhhhchhhh---cCCCh---h
Q 004157 256 LLPDYQRLLS--SMPSRRLNSSKLIENSEYFQN---KLVDTIHFMEILNLKDS-VEKDTFFRKLPNLA---EQLPR---Q 323 (771)
Q Consensus 256 l~~~i~~lL~--~~P~~Rps~~~lL~~~~fF~n---~lv~~~~~L~~l~~k~~-~eK~~F~~~L~~~l---~~fP~---~ 323 (771)
+...+..|+. .-+..+..+-++|++..-|-+ .+-+.+-|+--+..... .-+..-+..|.+.+ ..+|+ .
T Consensus 423 ~vs~lts~IR~lk~~~tK~~ALeLl~~lS~~i~de~~LDRVlPY~v~l~~Ds~a~Vra~Al~Tlt~~L~~Vr~~~~~dan 502 (1431)
T KOG1240|consen 423 FVSVLTSCIRALKTIQTKLAALELLQELSTYIDDEVKLDRVLPYFVHLLMDSEADVRATALETLTELLALVRDIPPSDAN 502 (1431)
T ss_pred eHHHHHHHHHhhhcchhHHHHHHHHHHHhhhcchHHHHhhhHHHHHHHhcCchHHHHHHHHHHHHHHHhhccCCCcccch
Confidence 4455555554 234556666677776544422 23344555555544433 33555566555544 34554 5
Q ss_pred hhhhhhHHHHHHHHhcCCCC------chhhHHH-------HHhccC--------------CChhhhh-------hhhHHH
Q 004157 324 IVLKKLLPLLASALEFGSAA------APALTAL-------LKMGSW--------------LSTEEFS-------VKVLPT 369 (771)
Q Consensus 324 ~~~~kILP~Ll~~~~~~~~~------~~~L~~l-------l~i~~~--------------l~~eef~-------~~i~P~ 369 (771)
++..-|+|.|........+. +..|.-+ +..+.. ...+.|. ..|-..
T Consensus 503 iF~eYlfP~L~~l~~d~~~~~vRiayAsnla~LA~tA~rFle~~q~~~~~g~~n~~nset~~~~~~~~~~~~L~~~V~~~ 582 (1431)
T KOG1240|consen 503 IFPEYLFPHLNHLLNDSSAQIVRIAYASNLAQLAKTAYRFLELTQELRQAGMLNDPNSETAPEQNYNTELQALHHTVEQM 582 (1431)
T ss_pred hhHhhhhhhhHhhhccCccceehhhHHhhHHHHHHHHHHHHHHHHHHHhcccccCcccccccccccchHHHHHHHHHHHH
Confidence 77788999998877653221 1112111 111111 1111122 224445
Q ss_pred HHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHH
Q 004157 370 IVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLS 449 (771)
Q Consensus 370 i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~la 449 (771)
+..|...++.-||.+||+++-.+...+.++--+|-|++++++-+.|++..+|.+-..+|..++-.++.+.+...|||+|.
T Consensus 583 v~sLlsd~~~~Vkr~Lle~i~~LC~FFGk~ksND~iLshLiTfLNDkDw~LR~aFfdsI~gvsi~VG~rs~seyllPLl~ 662 (1431)
T KOG1240|consen 583 VSSLLSDSPPIVKRALLESIIPLCVFFGKEKSNDVILSHLITFLNDKDWRLRGAFFDSIVGVSIFVGWRSVSEYLLPLLQ 662 (1431)
T ss_pred HHHHHcCCchHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHhcCccHHHHHHHHhhccceEEEEeeeeHHHHHHHHHH
Confidence 56677788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCCcchhhHHHHHHHhhhc--cCc-----------------c--hhhHHh--HHHHHHhhhcCCCcchhhheeee
Q 004157 450 KLQVDEEPAIRTNTTILLGNIASH--LNE-----------------G--TRKRVL--INAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 450 klq~D~~~~IRtnt~icl~kia~~--L~~-----------------~--~~~~vL--~~af~~~~lkD~f~~~R~a~l~a 506 (771)
.-.+|.+..|=.+++-||.-|.+. |.| + .|..++ |.+.. +.|.+-.+.|.++.+..
T Consensus 663 Q~ltD~EE~Viv~aL~~ls~Lik~~ll~K~~v~~i~~~v~PlL~hPN~WIR~~~~~iI~~~~-~~ls~advyc~l~P~ir 741 (1431)
T KOG1240|consen 663 QGLTDGEEAVIVSALGSLSILIKLGLLRKPAVKDILQDVLPLLCHPNLWIRRAVLGIIAAIA-RQLSAADVYCKLMPLIR 741 (1431)
T ss_pred HhccCcchhhHHHHHHHHHHHHHhcccchHHHHHHHHhhhhheeCchHHHHHHHHHHHHHHH-hhhhhhhheEEeehhhH
Confidence 999999999999998888766542 111 1 244443 55666 67888888888888777
Q ss_pred cc
Q 004157 507 SY 508 (771)
Q Consensus 507 ~~ 508 (771)
-|
T Consensus 742 pf 743 (1431)
T KOG1240|consen 742 PF 743 (1431)
T ss_pred Hh
Confidence 33
No 463
>PRK09687 putative lyase; Provisional
Probab=97.56 E-value=0.00062 Score=72.81 Aligned_cols=129 Identities=17% Similarity=0.159 Sum_probs=79.7
Q ss_pred hhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhh-cCCCcHHHHHHHHHHHHhhccCCChhHHhH
Q 004157 364 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATG-FADTSAFLREMTLKSMLVLAPKLSQRTISG 442 (771)
Q Consensus 364 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~g-f~D~~~~iRe~tlk~i~~l~~kL~~~~l~~ 442 (771)
..+++.+.+++.+.|+.+|.....-|-.+...-. ....++|.|... ++|.++.||..++.++-.+...-... ..
T Consensus 53 ~~~~~~l~~ll~~~d~~vR~~A~~aLg~lg~~~~---~~~~a~~~L~~l~~~D~d~~VR~~A~~aLG~~~~~~~~~--~~ 127 (280)
T PRK09687 53 QDVFRLAIELCSSKNPIERDIGADILSQLGMAKR---CQDNVFNILNNLALEDKSACVRASAINATGHRCKKNPLY--SP 127 (280)
T ss_pred chHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCcc---chHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccccccc--ch
Confidence 4566667777777777777776666655443111 134566776654 67777777777777776654322211 23
Q ss_pred HHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 443 SLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 443 ~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
.++..+..+..|+++.||..++..||+|.. .--++++. +.|+|+.+.+|.+|+++
T Consensus 128 ~a~~~l~~~~~D~~~~VR~~a~~aLg~~~~--------~~ai~~L~-~~L~d~~~~VR~~A~~a 182 (280)
T PRK09687 128 KIVEQSQITAFDKSTNVRFAVAFALSVIND--------EAAIPLLI-NLLKDPNGDVRNWAAFA 182 (280)
T ss_pred HHHHHHHHHhhCCCHHHHHHHHHHHhccCC--------HHHHHHHH-HHhcCCCHHHHHHHHHH
Confidence 455556566667777777777777766531 22456666 67777777777777777
No 464
>PRK09687 putative lyase; Provisional
Probab=97.48 E-value=0.00098 Score=71.33 Aligned_cols=127 Identities=14% Similarity=0.129 Sum_probs=94.9
Q ss_pred hhhhHHHHHHh-hcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHh
Q 004157 363 SVKVLPTIVKL-FASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTIS 441 (771)
Q Consensus 363 ~~~i~P~i~~l-F~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~ 441 (771)
...++|.|..+ ...+|..||.....-|-.+...-. .....++..+...+.|.++.||..++.++. ++..
T Consensus 88 ~~~a~~~L~~l~~~D~d~~VR~~A~~aLG~~~~~~~--~~~~~a~~~l~~~~~D~~~~VR~~a~~aLg----~~~~---- 157 (280)
T PRK09687 88 QDNVFNILNNLALEDKSACVRASAINATGHRCKKNP--LYSPKIVEQSQITAFDKSTNVRFAVAFALS----VIND---- 157 (280)
T ss_pred hHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccccc--ccchHHHHHHHHHhhCCCHHHHHHHHHHHh----ccCC----
Confidence 34678888877 678899999888776655432221 123456788889999999999999999984 3333
Q ss_pred HHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 442 GSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 442 ~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
.+.++.|..+..|+++.||.+++..||+|.. + ..-.++++. ++|.|+...+|.+|+.+
T Consensus 158 ~~ai~~L~~~L~d~~~~VR~~A~~aLg~~~~----~--~~~~~~~L~-~~L~D~~~~VR~~A~~a 215 (280)
T PRK09687 158 EAAIPLLINLLKDPNGDVRNWAAFALNSNKY----D--NPDIREAFV-AMLQDKNEEIRIEAIIG 215 (280)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHhcCCC----C--CHHHHHHHH-HHhcCCChHHHHHHHHH
Confidence 3455666666679999999999999999921 1 123467777 89999999999999999
No 465
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=97.47 E-value=0.00068 Score=69.22 Aligned_cols=144 Identities=10% Similarity=0.046 Sum_probs=80.4
Q ss_pred CCCceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCch-hHHH------HHHHHHHHHhcCCCCCeeEEeeeEE
Q 004157 18 DLPYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQD-GHLA------AARNGVKRLRTVRHPNILAFLHSTE 89 (771)
Q Consensus 18 ~~~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~-~~~~------~~~~ei~~Lk~LrHPnIlkv~d~~e 89 (771)
+..|++.+.+.... . .|..- .-+|..+.+|......... .... .+.+.+..+.+++.-++..+.+.+.
T Consensus 30 ~~~~~~~kv~k~~~r~--~ValI--ei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl 105 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRN--YVALI--EIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL 105 (229)
T ss_pred hCCceEEEeecCCCcc--EEEEE--EECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence 44566655554433 3 23333 2357888888876433221 1111 1344555556665444433333211
Q ss_pred ecccCcCCcccEEEEEecCCc--chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCCCCEEEcCCCc
Q 004157 90 VENIDATSTKITIYIVTEPVM--PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCLSSVVVTQTLD 167 (771)
Q Consensus 90 ~e~~d~~~~~~~iyIVtE~v~--~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp~NI~v~~~G~ 167 (771)
....-...-....+++|||+. +|.+...- .+ .+ .-.|..++.-||. .|++|||.+|.|++++.+|
T Consensus 106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~i-------~e-~~---~~ki~~~ikqlH~-~G~~HGD~hpgNFlv~~~~- 172 (229)
T PF06176_consen 106 AAEKKIFRYTSSYVLLMEYIEGVELNDIEDI-------DE-DL---AEKIVEAIKQLHK-HGFYHGDPHPGNFLVSNNG- 172 (229)
T ss_pred eeeeeeccceeEEEEEEEEecCeecccchhc-------CH-HH---HHHHHHHHHHHHH-cCCccCCCCcCcEEEECCc-
Confidence 111000000234568999993 45543211 01 12 3567788999996 9999999999999998555
Q ss_pred EEEEccCcccc
Q 004157 168 WKLHAFDVLSE 178 (771)
Q Consensus 168 ~KL~dFgla~~ 178 (771)
+++.||+..+.
T Consensus 173 i~iID~~~k~~ 183 (229)
T PF06176_consen 173 IRIIDTQGKRM 183 (229)
T ss_pred EEEEECccccc
Confidence 99999987543
No 466
>PTZ00429 beta-adaptin; Provisional
Probab=97.47 E-value=0.00098 Score=79.98 Aligned_cols=135 Identities=13% Similarity=0.173 Sum_probs=104.8
Q ss_pred hhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHH
Q 004157 365 KVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSL 444 (771)
Q Consensus 365 ~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~L 444 (771)
.+.|.+++++.++|-.+|-+..-++..|.+.-+... --....|.+-+.|.++.||..+|+.|.. |....+...+
T Consensus 68 ~LF~dVvk~~~S~d~elKKLvYLYL~~ya~~~pela--lLaINtl~KDl~d~Np~IRaLALRtLs~----Ir~~~i~e~l 141 (746)
T PTZ00429 68 YLFVDVVKLAPSTDLELKKLVYLYVLSTARLQPEKA--LLAVNTFLQDTTNSSPVVRALAVRTMMC----IRVSSVLEYT 141 (746)
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHcccChHHH--HHHHHHHHHHcCCCCHHHHHHHHHHHHc----CCcHHHHHHH
Confidence 367778889999998888777767777765444322 1257788999999999999999998864 4567778888
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 445 LKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 445 L~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
++.+.+...|..|.||.++++|+.||-..-..-....-+++-+. .+|.|..+-+...|+.+
T Consensus 142 ~~~lkk~L~D~~pYVRKtAalai~Kly~~~pelv~~~~~~~~L~-~LL~D~dp~Vv~nAl~a 202 (746)
T PTZ00429 142 LEPLRRAVADPDPYVRKTAAMGLGKLFHDDMQLFYQQDFKKDLV-ELLNDNNPVVASNAAAI 202 (746)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHhhCcccccccchHHHHH-HHhcCCCccHHHHHHHH
Confidence 99999999999999999999999998654332222334677777 78999999999888887
No 467
>PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1
Probab=97.46 E-value=0.00064 Score=67.78 Aligned_cols=148 Identities=15% Similarity=0.231 Sum_probs=110.6
Q ss_pred cHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCC
Q 004157 378 DRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEP 457 (771)
Q Consensus 378 Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~ 457 (771)
++.||-.++.-+-.++-+.+. +-+...|.++..|.|.++.||..|+..+.+++-. +.-.+++.++..+.++-.|+++
T Consensus 1 ~~~vR~n~i~~l~DL~~r~~~--~ve~~~~~l~~~L~D~~~~VR~~al~~Ls~Li~~-d~ik~k~~l~~~~l~~l~D~~~ 77 (178)
T PF12717_consen 1 DPSVRNNAIIALGDLCIRYPN--LVEPYLPNLYKCLRDEDPLVRKTALLVLSHLILE-DMIKVKGQLFSRILKLLVDENP 77 (178)
T ss_pred CHHHHHHHHHHHHHHHHhCcH--HHHhHHHHHHHHHCCCCHHHHHHHHHHHHHHHHc-CceeehhhhhHHHHHHHcCCCH
Confidence 467898899999888888875 4677899999999999999999999999998854 4445577887888888899999
Q ss_pred cchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcch--------hhheeee---ccCCHHHHHHHHHHHHHHHH
Q 004157 458 AIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPA--------RGAAKIL---SYLNCDVRSKAFQAVDQFLQ 526 (771)
Q Consensus 458 ~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~--------R~a~l~a---~~~~~~VR~~a~~~~~~~l~ 526 (771)
.||..+..|+..++...+++....++...+. .|.+..-+. +-.-++. .|-++ =.+.+.+++.+.+
T Consensus 78 ~Ir~~A~~~~~e~~~~~~~~~i~~~~~e~i~--~l~~~~~~~~~~~~~~~~~~~I~~fll~~i~~--d~~~~~l~~kl~~ 153 (178)
T PF12717_consen 78 EIRSLARSFFSELLKKRNPNIIYNNFPELIS--SLNNCYEHPVYGPLSREKRKKIYKFLLDFIDK--DKQKESLVEKLCQ 153 (178)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHH--HHhCccccccccccCHHHHHHHHHHHHHHcCc--HHHHHHHHHHHHH
Confidence 9999999999999999988888888877777 344432111 1111111 12111 2456677777777
Q ss_pred HHHHHH
Q 004157 527 IVKQYH 532 (771)
Q Consensus 527 ~l~~~~ 532 (771)
++..+.
T Consensus 154 ~~~~~~ 159 (178)
T PF12717_consen 154 RFLNAV 159 (178)
T ss_pred HHHHHc
Confidence 776654
No 468
>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ]. The domain is also found in other proteins involved in microtubule binding, including STU1, MOR1 and spindle pole body component Alp14.; PDB: 2QK2_A.
Probab=97.45 E-value=0.0023 Score=66.16 Aligned_cols=150 Identities=17% Similarity=0.243 Sum_probs=99.0
Q ss_pred HHHHHhhcCCcHHHHHHHHHhHHHHHhhcChh--hhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCC-hhHHhHHH
Q 004157 368 PTIVKLFASNDRAIRVALLQHIDQYGQSFSAQ--VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS-QRTISGSL 444 (771)
Q Consensus 368 P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~--~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~-~~~l~~~L 444 (771)
..|.+...+.--.|-...+.-+..+..++... .+-+.++|.++.-+.|+...||+.+...+..++...+ ...+ +
T Consensus 56 ~~i~~~l~d~Rs~v~~~A~~~l~~l~~~l~~~~~~~~~~~l~~Ll~~~~~~~~~i~~~a~~~L~~i~~~~~~~~~~---~ 132 (228)
T PF12348_consen 56 DAIIKQLSDLRSKVSKTACQLLSDLARQLGSHFEPYADILLPPLLKKLGDSKKFIREAANNALDAIIESCSYSPKI---L 132 (228)
T ss_dssp HHHHH-S-HH---HHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHGGG---HHHHHHHHHHHHHHHTTS-H--HH---H
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHCCcHHHH---H
Confidence 44444433222245555566666666666655 2356799999999999999999999999999999888 2321 3
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhccC--cc-hh----hHHhHHHHHHhhhcCCCcchhhheeeeccCCHHHHHHH
Q 004157 445 LKYLSKLQVDEEPAIRTNTTILLGNIASHLN--EG-TR----KRVLINAFTVRALRDTFSPARGAAKILSYLNCDVRSKA 517 (771)
Q Consensus 445 L~~laklq~D~~~~IRtnt~icl~kia~~L~--~~-~~----~~vL~~af~~~~lkD~f~~~R~a~l~a~~~~~~VR~~a 517 (771)
++.+.....+..+.+|.-++.||..+....+ .. .. .+.|++++. +.+.|+. .+||..|
T Consensus 133 ~~~l~~~~~~Kn~~vR~~~~~~l~~~l~~~~~~~~~l~~~~~~~~l~~~l~-~~l~D~~--------------~~VR~~A 197 (228)
T PF12348_consen 133 LEILSQGLKSKNPQVREECAEWLAIILEKWGSDSSVLQKSAFLKQLVKALV-KLLSDAD--------------PEVREAA 197 (228)
T ss_dssp HHHHHHHTT-S-HHHHHHHHHHHHHHHTT-----GGG--HHHHHHHHHHHH-HHHTSS---------------HHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHccchHhhhcccchHHHHHHHHH-HHCCCCC--------------HHHHHHH
Confidence 6777778889999999999999999999888 22 11 245889999 8999987 5688888
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 004157 518 FQAVDQFLQIVKQYHEKT 535 (771)
Q Consensus 518 ~~~~~~~l~~l~~~~~~~ 535 (771)
+++|..|.+...+-++.+
T Consensus 198 r~~~~~l~~~~~~~a~~~ 215 (228)
T PF12348_consen 198 RECLWALYSHFPERAESI 215 (228)
T ss_dssp HHHHHHHHHHH-HHH---
T ss_pred HHHHHHHHHHCCHhhccc
Confidence 888888887777766654
No 469
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. Clathrin coats contain both clathrin and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors []. All AP complexes are heterotetramers composed of two large subunits (adaptins), a medium subunit (mu) and a small subunit (sigma). Each subunit has a specific function. Adaptin subunits recognise and bind to clathrin through their hinge region (clathrin box), and recruit accessory proteins that modulate AP function through their C-terminal appendage domains. By contrast, GGAs are monomers composed of four domains, which have functions similar to AP subunits: an N-terminal VHS (Vps27p/Hrs/Stam) domain, a GAT (GGA and Tom1) domain, a hinge region, and a C-terminal GAE (gamma-adaptin ear) domain. The GAE domain is similar to the AP gamma-adaptin ear domain, being responsible for the recruitment of accessory proteins that regulate clathrin-mediated endocytosis []. While clathrin mediates endocytic protein transport from ER to Golgi, coatomers (COPI, COPII) primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the N-terminal domain of various adaptins from different AP clathrin adaptor complexes (including AP1, AP2, AP3 and AP4), and from the beta and gamma subunits of various coatomer (COP) adaptors. This domain has a 2-layer alpha/alpha fold that forms a right-handed superhelix, and is a member of the ARM repeat superfamily []. The N-terminal region of the various AP adaptor proteins share strong sequence identity; by contrast, the C-terminal domains of different adaptins share similar structural folds, but have little sequence identity []. It has been proposed that the N-terminal domain interacts with another uniform component of the coated vesicles. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 1W63_C 2JKR_A 2JKT_A 2XA7_A 2VGL_B 3TJZ_E.
Probab=97.34 E-value=0.0016 Score=75.91 Aligned_cols=134 Identities=16% Similarity=0.215 Sum_probs=93.6
Q ss_pred hhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHH
Q 004157 365 KVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSL 444 (771)
Q Consensus 365 ~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~L 444 (771)
...+.++++..++|..+|-..--.+..|.+.=+. +---+...+..-+.+.++.+|..+|+.+..+. ...+...+
T Consensus 42 ~~~~~vi~l~~s~~~~~Krl~yl~l~~~~~~~~~--~~~l~~n~l~kdl~~~n~~~~~lAL~~l~~i~----~~~~~~~l 115 (526)
T PF01602_consen 42 FLFMEVIKLISSKDLELKRLGYLYLSLYLHEDPE--LLILIINSLQKDLNSPNPYIRGLALRTLSNIR----TPEMAEPL 115 (526)
T ss_dssp STHHHHHCTCSSSSHHHHHHHHHHHHHHTTTSHH--HHHHHHHHHHHHHCSSSHHHHHHHHHHHHHH-----SHHHHHHH
T ss_pred hHHHHHHHHhCCCCHHHHHHHHHHHHHHhhcchh--HHHHHHHHHHHhhcCCCHHHHHHHHhhhhhhc----ccchhhHH
Confidence 4456666666666665553333333333333222 12226677777888888888888888888776 55556778
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 445 LKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 445 L~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
++.+.++..|+.+.||-++++|+.+|...-....... +++.+. ++|+|+.+.++.+|+.+
T Consensus 116 ~~~v~~ll~~~~~~VRk~A~~~l~~i~~~~p~~~~~~-~~~~l~-~lL~d~~~~V~~~a~~~ 175 (526)
T PF01602_consen 116 IPDVIKLLSDPSPYVRKKAALALLKIYRKDPDLVEDE-LIPKLK-QLLSDKDPSVVSAALSL 175 (526)
T ss_dssp HHHHHHHHHSSSHHHHHHHHHHHHHHHHHCHCCHHGG-HHHHHH-HHTTHSSHHHHHHHHHH
T ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHhccCHHHHHHH-HHHHHh-hhccCCcchhHHHHHHH
Confidence 8888888888888888888888888888754444445 788888 88888888888888877
No 470
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.33 E-value=0.00084 Score=72.59 Aligned_cols=138 Identities=16% Similarity=0.206 Sum_probs=89.9
Q ss_pred cCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC------------------------CCchhHHHHHHHHHHHHhcCCC
Q 004157 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT------------------------NAQDGHLAAARNGVKRLRTVRH 78 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~------------------------~~~~~~~~~~~~ei~~Lk~LrH 78 (771)
...|..|- . .||.++. .+|+.+|||+|.-+ +......--+..|++.|++|+.
T Consensus 149 nGCiSTGKEA--NVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~ 225 (520)
T KOG2270|consen 149 NGCISTGKEA--NVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN 225 (520)
T ss_pred ccccccCccc--eeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence 33455554 5 7999985 48889999999832 1111223346789999999987
Q ss_pred CCeeEEeeeEEecccCcCCcccEEEEEecCCcc---hHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCC
Q 004157 79 PNILAFLHSTEVENIDATSTKITIYIVTEPVMP---LSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155 (771)
Q Consensus 79 PnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v~~---L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dI 155 (771)
-+ +.+-+.+... .-.|||++++- -.-.|+...+......+. -.|++.-+.-|-+.|++||.||
T Consensus 226 aG-IP~PePIlLk---------~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~----Y~~~v~~MR~lY~~c~LVHADL 291 (520)
T KOG2270|consen 226 AG-IPCPEPILLK---------NHVLVMEFLGRDGWAAPKLKDASLSTSKAREL----YQQCVRIMRRLYQKCRLVHADL 291 (520)
T ss_pred cC-CCCCCceeee---------cceEeeeeccCCCCcCcccccccCChHHHHHH----HHHHHHHHHHHHHHhceeccch
Confidence 77 4444444432 34799999951 222344444332222222 3466677777777899999999
Q ss_pred CCCCEEEcCCCcEEEEccCccccc
Q 004157 156 CLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 156 kp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+--|+++ .+|.+.++|.+-+...
T Consensus 292 SEfN~Ly-hdG~lyiIDVSQSVE~ 314 (520)
T KOG2270|consen 292 SEFNLLY-HDGKLYIIDVSQSVEH 314 (520)
T ss_pred hhhhheE-ECCEEEEEEccccccC
Confidence 9999999 5667888887765443
No 471
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=97.22 E-value=0.0017 Score=67.37 Aligned_cols=134 Identities=10% Similarity=0.053 Sum_probs=75.5
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC--eeEEeeeEEecccCcCCcccE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN--ILAFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPn--Ilkv~d~~e~e~~d~~~~~~~ 101 (771)
++|+.|. + .||+. .|..+.+|.+.... ....+++|++.++.+..-+ +.+++++.+.. ..
T Consensus 7 ~~i~~G~t~--~~y~~----~~~~~VlR~~~~~~----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~--------~~ 68 (226)
T TIGR02172 7 TQTGEGGNG--ESYTH----KTGKWMLKLYNPGF----DKETIKREFDASRKVFSLGIPTPHPFDLVEDG--------GR 68 (226)
T ss_pred eeecCCCCc--ceeEe----cCCCEEEEeCCCCC----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecC--------Ce
Confidence 3567776 5 67863 25567788876422 2234688999999886433 46667666543 25
Q ss_pred EEEEecCC-c-c-hH--------------HHHHH----hC---CCCCCcHHHHHHH---HH-------HHHH-HHHHHH-
Q 004157 102 IYIVTEPV-M-P-LS--------------EKIKE----LG---LEGSQRDEYYAWG---LN-------QIAK-AVSFLN- 145 (771)
Q Consensus 102 iyIVtE~v-~-~-L~--------------~~L~~----~~---~~~~~~~~~i~~g---l~-------QI~~-aL~fLH- 145 (771)
.++|||++ + + +. ..+.+ .. ............. +. .+.. ...+|.
T Consensus 69 ~glv~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~ 148 (226)
T TIGR02172 69 LGLIYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKE 148 (226)
T ss_pred eeeeeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHh
Confidence 68899998 3 2 11 11111 11 0111100100000 00 0111 122222
Q ss_pred --cCCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 146 --NDCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 146 --~~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
....++|||++|.||+++++| ..++||+.+.
T Consensus 149 ~~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 149 VPDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCCCCceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 123578999999999999988 9999999875
No 472
>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region
Probab=97.03 E-value=0.0014 Score=58.35 Aligned_cols=67 Identities=13% Similarity=0.276 Sum_probs=57.4
Q ss_pred ChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhh--hhccHHHHHhhcCCCcHHHHHHH
Q 004157 358 STEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVV--DEQVYPHVATGFADTSAFLREMT 424 (771)
Q Consensus 358 ~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v--~~~I~p~l~~gf~D~~~~iRe~t 424 (771)
...+|.+.|+|.|..+|.++|++||++.+|.|-.+.+....+.+ -++||..++..+.|.++.||..+
T Consensus 20 ~~~~~l~~Il~pVL~~~~D~d~rVRy~AcEaL~ni~k~~~~~~l~~f~~IF~~L~kl~~D~d~~Vr~~a 88 (97)
T PF12755_consen 20 DISKYLDEILPPVLKCFDDQDSRVRYYACEALYNISKVARGEILPYFNEIFDALCKLSADPDENVRSAA 88 (97)
T ss_pred hHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHH
Confidence 36889999999999999999999999999999999988877664 34588888888899988888864
No 473
>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ]. The domain is also found in other proteins involved in microtubule binding, including STU1, MOR1 and spindle pole body component Alp14.; PDB: 2QK2_A.
Probab=97.03 E-value=0.0034 Score=64.89 Aligned_cols=117 Identities=22% Similarity=0.309 Sum_probs=91.2
Q ss_pred hhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhcc-HHHHHhhcCCCcHHHHHHHHHHHHhhccCCC-
Q 004157 359 TEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQV-YPHVATGFADTSAFLREMTLKSMLVLAPKLS- 436 (771)
Q Consensus 359 ~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I-~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~- 436 (771)
-+.|...++|.|++.++.....||-...+-|..++.+.+ +..++ ++.+..|+.+.++.+|+.++.-+..++...+
T Consensus 88 ~~~~~~~~l~~Ll~~~~~~~~~i~~~a~~~L~~i~~~~~---~~~~~~~~~l~~~~~~Kn~~vR~~~~~~l~~~l~~~~~ 164 (228)
T PF12348_consen 88 FEPYADILLPPLLKKLGDSKKFIREAANNALDAIIESCS---YSPKILLEILSQGLKSKNPQVREECAEWLAIILEKWGS 164 (228)
T ss_dssp GHHHHHHHHHHHHHGGG---HHHHHHHHHHHHHHHTTS----H--HHHHHHHHHHTT-S-HHHHHHHHHHHHHHHTT---
T ss_pred HHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHCC---cHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHccc
Confidence 466778899999999999988999999999999999988 22334 8899999999999999999999999999998
Q ss_pred -hhHH-----hHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcch
Q 004157 437 -QRTI-----SGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGT 478 (771)
Q Consensus 437 -~~~l-----~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~ 478 (771)
...+ ...+++.|.++-.|.++.||..+-.|+..+..+.++..
T Consensus 165 ~~~~l~~~~~~~~l~~~l~~~l~D~~~~VR~~Ar~~~~~l~~~~~~~a 212 (228)
T PF12348_consen 165 DSSVLQKSAFLKQLVKALVKLLSDADPEVREAARECLWALYSHFPERA 212 (228)
T ss_dssp --GGG--HHHHHHHHHHHHHHHTSS-HHHHHHHHHHHHHHHHHH-HHH
T ss_pred hHhhhcccchHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHhh
Confidence 2222 35699999999999999999999999999988887643
No 474
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.02 E-value=0.0064 Score=63.42 Aligned_cols=137 Identities=14% Similarity=0.156 Sum_probs=75.9
Q ss_pred CCCCCCCceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCC-CCCeeEEeeeEEecccCcCCcccEEEE
Q 004157 26 PYPSAWGSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVR-HPNILAFLHSTEVENIDATSTKITIYI 104 (771)
Q Consensus 26 ~ig~G~g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~Lr-HPnIlkv~d~~e~e~~d~~~~~~~iyI 104 (771)
.|..|.....||+.... +..+.||+..... ...+.+|++.++.|. +--+.++++.....+ .-++
T Consensus 5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~--------~~~l 69 (244)
T cd05150 5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSDDG--------RAWL 69 (244)
T ss_pred ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEecCC--------ccEE
Confidence 34444422378888753 4678888865432 224567888888874 334667777665422 4689
Q ss_pred EecCC-c-chHHH----------------HHHhC-CC--CCC-c---HHHHHHHHH-------------------HHHHH
Q 004157 105 VTEPV-M-PLSEK----------------IKELG-LE--GSQ-R---DEYYAWGLN-------------------QIAKA 140 (771)
Q Consensus 105 VtE~v-~-~L~~~----------------L~~~~-~~--~~~-~---~~~i~~gl~-------------------QI~~a 140 (771)
|||++ + +|... +.... .. ... . ...+.+... .+...
T Consensus 70 v~e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (244)
T cd05150 70 LTSAVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEEL 149 (244)
T ss_pred EEEeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHH
Confidence 99999 3 33321 11111 10 000 0 000100000 01111
Q ss_pred HHHHHc------CCCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 141 VSFLNN------DCKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 141 L~fLH~------~~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
+..|-. ...++|||+.|.||+++.++...|+||+.+.
T Consensus 150 ~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 150 YAELEATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred HHHHHhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 222211 2359999999999999998878899999764
No 475
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional
Probab=96.84 E-value=0.013 Score=72.81 Aligned_cols=53 Identities=15% Similarity=0.213 Sum_probs=28.9
Q ss_pred HHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHh
Q 004157 369 TIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLV 430 (771)
Q Consensus 369 ~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~ 430 (771)
.+..++..+|+.||...++-|..+... -...|+..+.|.++.||.++++++..
T Consensus 688 ~L~~~L~~~d~~VR~~A~~aL~~~~~~---------~~~~l~~~L~D~d~~VR~~Av~aL~~ 740 (897)
T PRK13800 688 ALRDHLGSPDPVVRAAALDVLRALRAG---------DAALFAAALGDPDHRVRIEAVRALVS 740 (897)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHhhccC---------CHHHHHHHhcCCCHHHHHHHHHHHhc
Confidence 444555566666666666555443210 01244556666666666666666654
No 476
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional
Probab=96.77 E-value=0.0076 Score=74.95 Aligned_cols=134 Identities=17% Similarity=0.187 Sum_probs=98.2
Q ss_pred hHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHH
Q 004157 366 VLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLL 445 (771)
Q Consensus 366 i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL 445 (771)
.++.|...+.++|..||...++.|..+. ...++|.|...|.|.++.||..++.++..+...+....
T Consensus 622 ~~~~L~~~L~D~d~~VR~~Av~~L~~~~--------~~~~~~~L~~aL~D~d~~VR~~Aa~aL~~l~~~~~~~~------ 687 (897)
T PRK13800 622 SVAELAPYLADPDPGVRRTAVAVLTETT--------PPGFGPALVAALGDGAAAVRRAAAEGLRELVEVLPPAP------ 687 (897)
T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHhhhc--------chhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCchH------
Confidence 4567778888999999999998887764 24478899999999999999999999987765444321
Q ss_pred HHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCCCcchhhheeee--cc------------CCH
Q 004157 446 KYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFSPARGAAKIL--SY------------LNC 511 (771)
Q Consensus 446 ~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~f~~~R~a~l~a--~~------------~~~ 511 (771)
.|..+..|+++.||...+-.|+++... . ...|. ++|+|+.+.+|.+|+.+ .. .+.
T Consensus 688 -~L~~~L~~~d~~VR~~A~~aL~~~~~~----~-----~~~l~-~~L~D~d~~VR~~Av~aL~~~~~~~~l~~~l~D~~~ 756 (897)
T PRK13800 688 -ALRDHLGSPDPVVRAAALDVLRALRAG----D-----AALFA-AALGDPDHRVRIEAVRALVSVDDVESVAGAATDENR 756 (897)
T ss_pred -HHHHHhcCCCHHHHHHHHHHHHhhccC----C-----HHHHH-HHhcCCCHHHHHHHHHHHhcccCcHHHHHHhcCCCH
Confidence 222223467888999888888886521 1 13456 78888888888888888 11 778
Q ss_pred HHHHHHHHHHHHH
Q 004157 512 DVRSKAFQAVDQF 524 (771)
Q Consensus 512 ~VR~~a~~~~~~~ 524 (771)
.||..|-+.|-.+
T Consensus 757 ~VR~~aa~aL~~~ 769 (897)
T PRK13800 757 EVRIAVAKGLATL 769 (897)
T ss_pred HHHHHHHHHHHHh
Confidence 8888888777544
No 477
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=96.77 E-value=0.0085 Score=61.14 Aligned_cols=139 Identities=15% Similarity=0.232 Sum_probs=74.1
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCC--eeEEeeeEEecccCcCCcccEE
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPN--ILAFLHSTEVENIDATSTKITI 102 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPn--Ilkv~d~~e~e~~d~~~~~~~i 102 (771)
.++.|. + .+|..+... ..+.+|..... .....+.+|...++.|...+ +.+++........ ....
T Consensus 4 ~l~~G~~n--~~~~v~~~~--~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~-----~~~~ 70 (239)
T PF01636_consen 4 PLSGGFSN--RVYRVTTDD--GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEF-----NGFP 70 (239)
T ss_dssp EEEESSSS--EEEEEEETT--SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEE-----TSEE
T ss_pred cCCCCCee--eEEEEEECC--cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccc-----cccc
Confidence 455565 5 799998764 58989997642 24556778888888886333 4566654332221 2357
Q ss_pred EEEecCCc--chHH----------------HHHHhC-C--C--CCCc-H----H----HHHH-------H----HHHHHH
Q 004157 103 YIVTEPVM--PLSE----------------KIKELG-L--E--GSQR-D----E----YYAW-------G----LNQIAK 139 (771)
Q Consensus 103 yIVtE~v~--~L~~----------------~L~~~~-~--~--~~~~-~----~----~i~~-------g----l~QI~~ 139 (771)
|++||++. ++.. .+.... . . .... . . ...+ . +..+..
T Consensus 71 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (239)
T PF01636_consen 71 YLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEE 150 (239)
T ss_dssp EEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred eEEEEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHH
Confidence 99999982 3433 111110 0 0 0000 0 0 0000 0 111222
Q ss_pred -HHHHHH------cCCCceecCCCCCCEEEc-CCCcEEEEccCccc
Q 004157 140 -AVSFLN------NDCKLVHGNVCLSSVVVT-QTLDWKLHAFDVLS 177 (771)
Q Consensus 140 -aL~fLH------~~~~ivH~dIkp~NI~v~-~~G~~KL~dFgla~ 177 (771)
.+..++ ....++|||+++.||+++ .+|.+-|+||+.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 151 RLLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred HHHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 233333 235799999999999999 66767899999864
No 478
>cd00020 ARM Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, the junctional plaque protein plakoglobin, the adenomatous polyposis coli (APC) tumor suppressor protein, and a number of other proteins. ARM has been implicated in mediating protein-protein interactions, but no common features among the target proteins recognized by the ARM repeats have been identified; related to the HEAT domain; three consecutive copies of the repeat are represented by this alignment model.
Probab=96.69 E-value=0.0075 Score=54.76 Aligned_cols=108 Identities=19% Similarity=0.193 Sum_probs=86.9
Q ss_pred hhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhh---cChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChh--
Q 004157 364 VKVLPTIVKLFASNDRAIRVALLQHIDQYGQS---FSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQR-- 438 (771)
Q Consensus 364 ~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~---l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~-- 438 (771)
..++|.+..++...++.+|...+.-|..+... .....+...++|.++..+.|.++.+|+.++..+-.++..-...
T Consensus 6 ~~~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~ 85 (120)
T cd00020 6 AGGLPALVSLLSSSDENVQREAAWALSNLSAGNNDNIQAVVEAGGLPALVQLLKSEDEEVVKAALWALRNLAAGPEDNKL 85 (120)
T ss_pred cCChHHHHHHHHcCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCChHHHHHHHhCCCHHHHHHHHHHHHHHccCcHHHHH
Confidence 34788888888888888887777777777654 3445566689999999999999999999999999998765432
Q ss_pred -HHhHHHHHHHHhhccCCCCcchhhHHHHHHHhh
Q 004157 439 -TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIA 471 (771)
Q Consensus 439 -~l~~~LL~~laklq~D~~~~IRtnt~icl~kia 471 (771)
.+++.+++.|.++..+.+..+|-..+-+|..|+
T Consensus 86 ~~~~~g~l~~l~~~l~~~~~~~~~~a~~~l~~l~ 119 (120)
T cd00020 86 IVLEAGGVPKLVNLLDSSNEDIQKNATGALSNLA 119 (120)
T ss_pred HHHHCCChHHHHHHHhcCCHHHHHHHHHHHHHhh
Confidence 344568999999988888999999999988875
No 479
>KOG1820 consensus Microtubule-associated protein [Cytoskeleton]
Probab=96.62 E-value=0.02 Score=69.08 Aligned_cols=189 Identities=14% Similarity=0.122 Sum_probs=132.3
Q ss_pred hhhccCChhhHHhhhhhchhhhcCCC--hhhhhhhhHHHHHHHHhcCCCCc---hhhHHHHHhccCCCh--hhhhhhhHH
Q 004157 296 EILNLKDSVEKDTFFRKLPNLAEQLP--RQIVLKKLLPLLASALEFGSAAA---PALTALLKMGSWLST--EEFSVKVLP 368 (771)
Q Consensus 296 ~~l~~k~~~eK~~F~~~L~~~l~~fP--~~~~~~kILP~Ll~~~~~~~~~~---~~L~~ll~i~~~l~~--eef~~~i~P 368 (771)
.++.-++-.++.+-+.++.+.+.+=. ..-...-++-.+++....+.... ..+..+=.|+..|.. ..|...+.|
T Consensus 260 t~~~s~~WK~R~Eale~l~~~l~e~~~~~~~~~~~ll~~~~ki~~kDaN~~v~~~aa~~l~~ia~~lr~~~~~~~~~v~p 339 (815)
T KOG1820|consen 260 TEMLSKKWKDRKEALEELVAILEEAKKEIVKGYTGLLGILLKIRLKDANINVVMLAAQILELIAKKLRPLFRKYAKNVFP 339 (815)
T ss_pred HhhhccchHHHHHHHHHHHHHHhccccccccCcchHHHHHHHHhccCcchhHHHHHHHHHHHHHHhcchhhHHHHHhhcc
Confidence 34444555555555555555555433 11222224444555444443222 223333345555543 568888999
Q ss_pred HHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCC----hhHHhHHH
Q 004157 369 TIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLS----QRTISGSL 444 (771)
Q Consensus 369 ~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~----~~~l~~~L 444 (771)
.|...|...-..+|=.|+.-++.+.. ....+.+.+.+..++.+.+|.+|..|..-+-....+++ ++-....+
T Consensus 340 ~lld~lkekk~~l~d~l~~~~d~~~n----s~~l~~~~~~I~e~lk~knp~~k~~~~~~l~r~~~~~~~~~~~~~t~~~l 415 (815)
T KOG1820|consen 340 SLLDRLKEKKSELRDALLKALDAILN----STPLSKMSEAILEALKGKNPQIKGECLLLLDRKLRKLGPKTVEKETVKTL 415 (815)
T ss_pred hHHHHhhhccHHHHHHHHHHHHHHHh----cccHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHhhcCCcCcchhhHHHH
Confidence 99999988888899999988888888 34466688899999999999999999888777777777 34457789
Q ss_pred HHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHHhHHHHH
Q 004157 445 LKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRVLINAFT 488 (771)
Q Consensus 445 L~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~vL~~af~ 488 (771)
.|++.+..+|.+..||.++.-|++-+...+++....+.|....-
T Consensus 416 ~p~~~~~~~D~~~~VR~Aa~e~~~~v~k~~Ge~~~~k~L~~~~~ 459 (815)
T KOG1820|consen 416 VPHLIKHINDTDKDVRKAALEAVAAVMKVHGEEVFKKLLKDLDK 459 (815)
T ss_pred hHHHhhhccCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhcc
Confidence 99999999999999999999999999999998776665555543
No 480
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=96.46 E-value=0.0068 Score=73.99 Aligned_cols=200 Identities=17% Similarity=0.204 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHhcCCCCCeeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Q 004157 63 LAAARNGVKRLRTVRHPNILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKA 140 (771)
Q Consensus 63 ~~~~~~ei~~Lk~LrHPnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~a 140 (771)
+....-|+..+.+++|+|+..++.+-...-.. +-.+++..|+| .++...+...... ..+.......++.+|
T Consensus 226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~----g~~~~v~~~~~s~~~~~~~~q~v~~i---~~~~~r~~~~~~~~G 298 (1351)
T KOG1035|consen 226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFR----GIVLDVLQEICSKVELRSLLQSVGSI---PLETLRILHQKLLEG 298 (1351)
T ss_pred HHHHHHHHHHHHhhccccccceeEEeehhhcc----hHHHHHHHhhcCccchHHHHhhcccc---CHHHHHHHHHHHhhh
Confidence 44455678888999999999999886543211 11334556677 3566666654432 223333347799999
Q ss_pred HHHHHcCCCceecCCCCC---CEEEcCCCcEEEE--ccCcccccCCCCCCCCCCccccccccCCCCCChhcccccccccc
Q 004157 141 VSFLNNDCKLVHGNVCLS---SVVVTQTLDWKLH--AFDVLSEFDGNNEAANGPMLQYAWLVGAQYKPVELAKSDWTAVR 215 (771)
Q Consensus 141 L~fLH~~~~ivH~dIkp~---NI~v~~~G~~KL~--dFgla~~~~~~~~~~~~~~~~~~~~~~~~Y~aPE~~~~~~~~~~ 215 (771)
|.++|. ..+.|.-+... ..-++..+....+ +|+.+....+... .........+.++|......
T Consensus 299 L~~~h~-~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~-------~~~~~~~~~~~~~e~~~~~~---- 366 (1351)
T KOG1035|consen 299 LAYLHS-LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK-------SFSDLLAEIRNADEDLKENT---- 366 (1351)
T ss_pred HHHHHH-hccceeEEecccccccccCccceeecchhhhcccccCCCccc-------chhhcCcccccccccccccc----
Confidence 999996 55555444444 2223344556666 7777666544221 11223334556666654321
Q ss_pred CCCCCcchHHHHHHHHHHHhhCCCCCChhhh-hcc--CCCCcchHHHHHHHhccCCCCCCChHHHhhCC
Q 004157 216 KSPPWSIDSWGLGCLIYELFSGMRLSKTEEL-RNT--ASIPKSLLPDYQRLLSSMPSRRLNSSKLIENS 281 (771)
Q Consensus 216 ~~~~~~~Di~SLG~li~el~~g~~p~~~~~l-~~~--~~IP~~l~~~i~~lL~~~P~~Rps~~~lL~~~ 281 (771)
.......|+|.+|.+...+..|..+...... ..+ ......+.....+|+..++++|+++.+++.|.
T Consensus 367 ~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~ 435 (1351)
T KOG1035|consen 367 AKKSRLTDLWCLGLLLLQLSQGEDISEKSAVPVSLLDVLSTSELLDALPKCLDEDSEERLSALELLTHP 435 (1351)
T ss_pred chhhhhhHHHHHHHHHhhhhhcCcccccccchhhhhccccchhhhhhhhhhcchhhhhccchhhhhhch
Confidence 1122346999999999998887654321111 100 11122566777889999999999999999984
No 481
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=96.41 E-value=0.016 Score=57.10 Aligned_cols=124 Identities=15% Similarity=0.119 Sum_probs=84.5
Q ss_pred cCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCCchhHHHHHHHHHHHHhcCCCCCee-EEeeeEEecccCcCCcccE
Q 004157 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNAQDGHLAAARNGVKRLRTVRHPNIL-AFLHSTEVENIDATSTKIT 101 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~~~~~~~~~~~ei~~Lk~LrHPnIl-kv~d~~e~e~~d~~~~~~~ 101 (771)
.+.++.|+ | .||.|.++ |..+++|+-... .....+..|.++|..+.--++- ++|.+-+
T Consensus 27 ~~~L~KG~~s--~Vyl~~~~--~~~~a~Kvrr~d----s~r~~l~kEakiLeil~g~~~~p~vy~yg~------------ 86 (201)
T COG2112 27 EKELAKGTTS--VVYLGEWR--GGEVALKVRRRD----SPRRNLEKEAKILEILAGEGVTPEVYFYGE------------ 86 (201)
T ss_pred hhhhhccccc--EEEEeecc--CceEEEEEecCC----cchhhHHHHHHHHHHhhhcCCCceEEEech------------
Confidence 34678888 8 89999986 779999986532 3456788899999999876653 4444433
Q ss_pred EEEEecCC-c-chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCCCC--CCEEEcCCCcEEEEccCccc
Q 004157 102 IYIVTEPV-M-PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNVCL--SSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 102 iyIVtE~v-~-~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dIkp--~NI~v~~~G~~KL~dFgla~ 177 (771)
.+|.|||+ + +|.+.-... ..+. +..++++---|- ..||-|+.|+- .||++ .++++.|+||+-++
T Consensus 87 ~~i~me~i~G~~L~~~~~~~------~rk~----l~~vlE~a~~LD-~~GI~H~El~~~~k~vlv-~~~~~~iIDFd~At 154 (201)
T COG2112 87 DFIRMEYIDGRPLGKLEIGG------DRKH----LLRVLEKAYKLD-RLGIEHGELSRPWKNVLV-NDRDVYIIDFDSAT 154 (201)
T ss_pred hhhhhhhhcCcchhhhhhcc------cHHH----HHHHHHHHHHHH-HhccchhhhcCCceeEEe-cCCcEEEEEccchh
Confidence 26779999 4 566543321 1122 456666633344 47999999975 45555 55589999999987
Q ss_pred cc
Q 004157 178 EF 179 (771)
Q Consensus 178 ~~ 179 (771)
..
T Consensus 155 ~k 156 (201)
T COG2112 155 FK 156 (201)
T ss_pred hc
Confidence 43
No 482
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=96.28 E-value=0.038 Score=62.00 Aligned_cols=75 Identities=15% Similarity=0.051 Sum_probs=48.1
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCCC---c--hhHHHHHHHHHHHHhcCC---CCCeeEEeeeEEecccCc
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTNA---Q--DGHLAAARNGVKRLRTVR---HPNILAFLHSTEVENIDA 95 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~~---~--~~~~~~~~~ei~~Lk~Lr---HPnIlkv~d~~e~e~~d~ 95 (771)
+.++.|. + .||++.....++.|.||.-..... . ....++.+.|.+.|+.+. -..+.+++.+-+.
T Consensus 32 ~elggGn~N--~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~~----- 104 (401)
T PRK09550 32 REIGDGNLN--LVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDEE----- 104 (401)
T ss_pred eEcCCCceE--EEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECCC-----
Confidence 4577776 6 899998764335899998531100 1 123456677888888764 2457778776432
Q ss_pred CCcccEEEEEecCCcc
Q 004157 96 TSTKITIYIVTEPVMP 111 (771)
Q Consensus 96 ~~~~~~iyIVtE~v~~ 111 (771)
..++|||++.+
T Consensus 105 -----~~~lVME~L~~ 115 (401)
T PRK09550 105 -----LAVTVMEDLSD 115 (401)
T ss_pred -----CCEEEEecCCC
Confidence 45899999843
No 483
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=96.25 E-value=0.026 Score=58.65 Aligned_cols=30 Identities=17% Similarity=0.206 Sum_probs=25.3
Q ss_pred CCceecCCCCCCEEEcCCCcEEEEccCccc
Q 004157 148 CKLVHGNVCLSSVVVTQTLDWKLHAFDVLS 177 (771)
Q Consensus 148 ~~ivH~dIkp~NI~v~~~G~~KL~dFgla~ 177 (771)
..++|||+++.||+|+..+..-|+||+.+.
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~ 193 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLG 193 (235)
T ss_pred ceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence 359999999999999876556799999874
No 484
>PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 []. Arrays of HEAT repeats consists of 3 to 36 units forming a rod-like helical structure and appear to function as protein-protein interaction surfaces. It has been noted that many HEAT repeat-containing proteins are involved in intracellular transport processes. In the crystal structure of PP2A PR65/A [], the HEAT repeats consist of pairs of antiparallel alpha helices [].; GO: 0005515 protein binding; PDB: 3FGA_A 2PF4_C 2IAE_A 2BKU_D 3EA5_B 3ND2_A 2BPT_A 2NYL_A 2NPP_D 2PKG_B ....
Probab=96.24 E-value=0.0037 Score=43.34 Aligned_cols=31 Identities=39% Similarity=0.519 Sum_probs=23.6
Q ss_pred HHHHHHhhccCCCCcchhhHHHHHHHhhhcc
Q 004157 444 LLKYLSKLQVDEEPAIRTNTTILLGNIASHL 474 (771)
Q Consensus 444 LL~~laklq~D~~~~IRtnt~icl~kia~~L 474 (771)
|||.|.++..|+++.||.+++.||++|++++
T Consensus 1 llp~l~~~l~D~~~~VR~~a~~~l~~i~~~~ 31 (31)
T PF02985_consen 1 LLPILLQLLNDPSPEVRQAAAECLGAIAEHC 31 (31)
T ss_dssp HHHHHHHHHT-SSHHHHHHHHHHHHHHHHTS
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHHHhhC
Confidence 5777778888888888888888888887764
No 485
>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region
Probab=96.24 E-value=0.025 Score=50.45 Aligned_cols=67 Identities=16% Similarity=0.298 Sum_probs=58.3
Q ss_pred hhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHH--hHHHHHHHHhhccCCCCcchhhHHHH
Q 004157 400 VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTI--SGSLLKYLSKLQVDEEPAIRTNTTIL 466 (771)
Q Consensus 400 ~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l--~~~LL~~laklq~D~~~~IRtnt~ic 466 (771)
..-+.|+|.++.+|.|.+..||..+..++..++.......+ -++|+..|.++..|+++.||.-+.+.
T Consensus 23 ~~l~~Il~pVL~~~~D~d~rVRy~AcEaL~ni~k~~~~~~l~~f~~IF~~L~kl~~D~d~~Vr~~a~~L 91 (97)
T PF12755_consen 23 KYLDEILPPVLKCFDDQDSRVRYYACEALYNISKVARGEILPYFNEIFDALCKLSADPDENVRSAAELL 91 (97)
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHH
Confidence 44567999999999999999999999999999877777665 47899999999999999999877554
No 486
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=96.23 E-value=0.0074 Score=60.71 Aligned_cols=98 Identities=17% Similarity=0.005 Sum_probs=70.0
Q ss_pred HHHHHHHhcCCC-CCeeEEeeeEEecccCcCCcccEEEEEecCCc--chHHH---HHHhCCCCCCcHHHHHHHHHHHHHH
Q 004157 67 RNGVKRLRTVRH-PNILAFLHSTEVENIDATSTKITIYIVTEPVM--PLSEK---IKELGLEGSQRDEYYAWGLNQIAKA 140 (771)
Q Consensus 67 ~~ei~~Lk~LrH-PnIlkv~d~~e~e~~d~~~~~~~iyIVtE~v~--~L~~~---L~~~~~~~~~~~~~i~~gl~QI~~a 140 (771)
.+|.-+|+.|.+ +++.++++++-. ++|+||++ ++... +..... ........+..+++..
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~------------~~v~E~~~~~~~~~~~~~l~~~~~---~~w~~R~~iA~~lL~~ 71 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR------------FYVVEYVGAGSLYGIYRPLSQFLQ---SPWEQRAKIALQLLEL 71 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC------------EEEEEeecCccccccccccccccc---cCHHHHHHHHHHHHHH
Confidence 468888999986 689999999843 77999996 33211 111100 1122233448888999
Q ss_pred HHHHHcC--CCceecCCCCCCEEEcCCCcEEEEccCccccc
Q 004157 141 VSFLNND--CKLVHGNVCLSSVVVTQTLDWKLHAFDVLSEF 179 (771)
Q Consensus 141 L~fLH~~--~~ivH~dIkp~NI~v~~~G~~KL~dFgla~~~ 179 (771)
+.+|++. ..+.-+|++++|+-|+++|.+|+.|.+.+...
T Consensus 72 l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 72 LEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred HHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 9999851 24778999999999999999999999987644
No 487
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells. 26S proteasome non-ATPase regulatory subunit 5 is one of a number of chaperones that are involved in the assembly of the proteasome. The chaperones dissociate before 26S proteasome formation is complete [].; GO: 0044183 protein binding involved in protein folding
Probab=96.21 E-value=0.049 Score=63.31 Aligned_cols=154 Identities=19% Similarity=0.209 Sum_probs=116.7
Q ss_pred HhccCCChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcCh---hhhhhccHHHHHhhcCCCcHHHHHHHHHHH
Q 004157 352 KMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSA---QVVDEQVYPHVATGFADTSAFLREMTLKSM 428 (771)
Q Consensus 352 ~i~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~---~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i 428 (771)
++.+.+..++-...+.+.+......++..||...|..+..++.+-+. -..+..+++.++.++.|.+..|.+.+++.+
T Consensus 64 ~~l~~~~~~~l~~~~~~~L~~gL~h~~~~Vr~l~l~~l~~~~~~~~~~~~~~~~~~l~~~i~~~L~~~d~~Va~~A~~~L 143 (503)
T PF10508_consen 64 RLLSALSPDSLLPQYQPFLQRGLTHPSPKVRRLALKQLGRIARHSEGAAQLLVDNELLPLIIQCLRDPDLSVAKAAIKAL 143 (503)
T ss_pred HHHhccCHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHhcCccHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 44455555555677788899999999999999988888777655432 245678999999999999999999999999
Q ss_pred HhhccCCChh--HHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcch---hhHHhHHHHHHhhhcCCCcchhhhe
Q 004157 429 LVLAPKLSQR--TISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGT---RKRVLINAFTVRALRDTFSPARGAA 503 (771)
Q Consensus 429 ~~l~~kL~~~--~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~---~~~vL~~af~~~~lkD~f~~~R~a~ 503 (771)
..++..-..- .+.+.++..|..+-..+...||....-++.+|+.+=.... ...=|++.+. +.|++.++-+|+.+
T Consensus 144 ~~l~~~~~~~~~l~~~~~~~~L~~l~~~~~~~vR~Rv~el~v~i~~~S~~~~~~~~~sgll~~ll-~eL~~dDiLvqlna 222 (503)
T PF10508_consen 144 KKLASHPEGLEQLFDSNLLSKLKSLMSQSSDIVRCRVYELLVEIASHSPEAAEAVVNSGLLDLLL-KELDSDDILVQLNA 222 (503)
T ss_pred HHHhCCchhHHHHhCcchHHHHHHHHhccCHHHHHHHHHHHHHHHhcCHHHHHHHHhccHHHHHH-HHhcCccHHHHHHH
Confidence 9998753332 1234447888887766677899999999988876543322 1112678888 78999999999998
Q ss_pred eee
Q 004157 504 KIL 506 (771)
Q Consensus 504 l~a 506 (771)
+.-
T Consensus 223 lel 225 (503)
T PF10508_consen 223 LEL 225 (503)
T ss_pred HHH
Confidence 875
No 488
>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A.
Probab=96.20 E-value=0.021 Score=49.19 Aligned_cols=86 Identities=16% Similarity=0.337 Sum_probs=63.2
Q ss_pred HHHHHHhh-cCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHH
Q 004157 367 LPTIVKLF-ASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLL 445 (771)
Q Consensus 367 ~P~i~~lF-~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL 445 (771)
+|.+++.+ ..+++.+|...+..|. .+.. .+++|.++..+.|.++.||.+++.++-.+ + ..+.+
T Consensus 1 i~~L~~~l~~~~~~~vr~~a~~~L~----~~~~----~~~~~~L~~~l~d~~~~vr~~a~~aL~~i----~----~~~~~ 64 (88)
T PF13646_consen 1 IPALLQLLQNDPDPQVRAEAARALG----ELGD----PEAIPALIELLKDEDPMVRRAAARALGRI----G----DPEAI 64 (88)
T ss_dssp HHHHHHHHHTSSSHHHHHHHHHHHH----CCTH----HHHHHHHHHHHTSSSHHHHHHHHHHHHCC----H----HHHTH
T ss_pred CHHHHHHHhcCCCHHHHHHHHHHHH----HcCC----HhHHHHHHHHHcCCCHHHHHHHHHHHHHh----C----CHHHH
Confidence 45677766 8899999988887666 3332 35789999999999999999999999865 2 34566
Q ss_pred HHHHhhc-cCCCCcchhhHHHHHH
Q 004157 446 KYLSKLQ-VDEEPAIRTNTTILLG 468 (771)
Q Consensus 446 ~~laklq-~D~~~~IRtnt~icl~ 468 (771)
+.|.++. .|.+..||..++-.||
T Consensus 65 ~~L~~~l~~~~~~~vr~~a~~aL~ 88 (88)
T PF13646_consen 65 PALIKLLQDDDDEVVREAAAEALG 88 (88)
T ss_dssp HHHHHHHTC-SSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcHHHHHHHHhhcC
Confidence 6676644 4556778988877765
No 489
>COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion]
Probab=96.17 E-value=0.027 Score=66.86 Aligned_cols=149 Identities=15% Similarity=0.251 Sum_probs=113.1
Q ss_pred HHHhccCCChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHH
Q 004157 350 LLKMGSWLSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSML 429 (771)
Q Consensus 350 ll~i~~~l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~ 429 (771)
+=+|...+...+....++|-+++.....|..++-.+=-++..|.+.=+.+.+. ..+.+..-|+|.|+.||..||+.|.
T Consensus 40 mK~iIa~M~~G~dmssLf~dViK~~~trd~ElKrL~ylYl~~yak~~P~~~lL--avNti~kDl~d~N~~iR~~AlR~ls 117 (757)
T COG5096 40 MKKIIAQMSLGEDMSSLFPDVIKNVATRDVELKRLLYLYLERYAKLKPELALL--AVNTIQKDLQDPNEEIRGFALRTLS 117 (757)
T ss_pred HHHHHHHHhcCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCHHHHHH--HHHHHHhhccCCCHHHHHHHHHHHH
Confidence 33333334443345667788888877888888777666777776665543322 5788999999999999999999874
Q ss_pred hhccCCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCcchhhHH-hHHHHHHhhhcCCCcchhhheeee
Q 004157 430 VLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNEGTRKRV-LINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 430 ~l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~~~~~~v-L~~af~~~~lkD~f~~~R~a~l~a 506 (771)
+|....+...+++-+.++..|+.+.||-++++|+.||=. ++++..... ++-... -++.|+.+.|--+|+.+
T Consensus 118 ----~l~~~el~~~~~~~ik~~l~d~~ayVRk~Aalav~kly~-ld~~l~~~~g~~~~l~-~l~~D~dP~Vi~nAl~s 189 (757)
T COG5096 118 ----LLRVKELLGNIIDPIKKLLTDPHAYVRKTAALAVAKLYR-LDKDLYHELGLIDILK-ELVADSDPIVIANALAS 189 (757)
T ss_pred ----hcChHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHh-cCHhhhhcccHHHHHH-HHhhCCCchHHHHHHHH
Confidence 678899999999999999999999999999999999853 444444444 566666 67888888888888877
No 490
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.16 E-value=0.0044 Score=66.20 Aligned_cols=136 Identities=14% Similarity=0.150 Sum_probs=90.7
Q ss_pred CceecCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC--------CCch----------h--HHHHHHHHHHHHhcCCC
Q 004157 20 PYNIGDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT--------NAQD----------G--HLAAARNGVKRLRTVRH 78 (771)
Q Consensus 20 ~Y~i~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~--------~~~~----------~--~~~~~~~ei~~Lk~LrH 78 (771)
=|.+|++||.|- + .||.+.+. .|.+.++|.-... +..+ . ..-.+.+|+..|+.|.-
T Consensus 93 v~svGnqIGVGKES--DIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e 169 (465)
T KOG2268|consen 93 VESVGNQIGVGKES--DIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYE 169 (465)
T ss_pred hhhhcccccccccc--ceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHH
Confidence 377889999988 7 89999875 5788878754421 1110 0 12245679999999863
Q ss_pred C--CeeEEeeeEEecccCcCCcccEEEEEecCC--cchHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecC
Q 004157 79 P--NILAFLHSTEVENIDATSTKITIYIVTEPV--MPLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGN 154 (771)
Q Consensus 79 P--nIlkv~d~~e~e~~d~~~~~~~iyIVtE~v--~~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~d 154 (771)
. -|.+.+|+. .-++|||++ .||...-+- .....+ ...++.-+.-|-+ .|+||||
T Consensus 170 ~gfpVPkpiD~~------------RH~Vvmelv~g~Pl~~v~~v------~d~~~l---y~~lm~~Iv~la~-~GlIHgD 227 (465)
T KOG2268|consen 170 RGFPVPKPIDHN------------RHCVVMELVDGYPLRQVRHV------EDPPTL---YDDLMGLIVRLAN-HGLIHGD 227 (465)
T ss_pred cCCCCCCccccc------------ceeeHHHhhcccceeeeeec------CChHHH---HHHHHHHHHHHHH-cCceecc
Confidence 2 366666654 448999999 366532111 112222 3344444455664 7999999
Q ss_pred CCCCCEEEcCCCcEEEEccCcccccC
Q 004157 155 VCLSSVVVTQTLDWKLHAFDVLSEFD 180 (771)
Q Consensus 155 Ikp~NI~v~~~G~~KL~dFgla~~~~ 180 (771)
.+--||+|.+++.++++||--+....
T Consensus 228 FNEFNimv~dd~~i~vIDFPQmvS~s 253 (465)
T KOG2268|consen 228 FNEFNIMVKDDDKIVVIDFPQMVSTS 253 (465)
T ss_pred cchheeEEecCCCEEEeechHhhccC
Confidence 99999999999999999998776543
No 491
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.15 E-value=0.031 Score=61.53 Aligned_cols=74 Identities=12% Similarity=-0.010 Sum_probs=45.5
Q ss_pred CCCCCC-CceEEEEeEECCCCCcEEEEEEeCC-----CCchhHHHHHHHHHHHHhcCC--CC-CeeEEeeeEEecccCcC
Q 004157 26 PYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT-----NAQDGHLAAARNGVKRLRTVR--HP-NILAFLHSTEVENIDAT 96 (771)
Q Consensus 26 ~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~-----~~~~~~~~~~~~ei~~Lk~Lr--HP-nIlkv~d~~e~e~~d~~ 96 (771)
.||.|. . .||++.....++.|.||--..- ..-.-...+.+-|...|+... -| .+.++|.+-..
T Consensus 2 EigdGnlN--~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e------ 73 (370)
T TIGR01767 2 EVGDGNLN--LVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDTE------ 73 (370)
T ss_pred cCCCCceE--EEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEccc------
Confidence 466676 5 7999987543368999865421 011223445666778887764 44 46666655432
Q ss_pred CcccEEEEEecCCcc
Q 004157 97 STKITIYIVTEPVMP 111 (771)
Q Consensus 97 ~~~~~iyIVtE~v~~ 111 (771)
...+|||++.+
T Consensus 74 ----~~~~vMEdL~~ 84 (370)
T TIGR01767 74 ----MAVTVMEDLSH 84 (370)
T ss_pred ----cceehHhhCcc
Confidence 45799999843
No 492
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.13 E-value=0.021 Score=63.66 Aligned_cols=75 Identities=12% Similarity=-0.040 Sum_probs=48.2
Q ss_pred cCCCCCCC-CceEEEEeEECCCCCcEEEEEEeCC--C--CchhHHHHHHHHHHHHhcCC--CC-CeeEEeeeEEecccCc
Q 004157 24 GDPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGT--N--AQDGHLAAARNGVKRLRTVR--HP-NILAFLHSTEVENIDA 95 (771)
Q Consensus 24 ~e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~--~--~~~~~~~~~~~ei~~Lk~Lr--HP-nIlkv~d~~e~e~~d~ 95 (771)
.+.||.|. . -||++.+...++.|.||--..- . .-.-..++.+-|.+.|+.+. -| .+.++|.+-+.
T Consensus 34 ~~eigdGnlN--~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D~e----- 106 (409)
T PRK12396 34 CKEIGDGNLN--YVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFDSV----- 106 (409)
T ss_pred eeEcCCCceE--EEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEECcH-----
Confidence 34677777 5 7999987544567888865421 1 11123556677888888774 45 46667765432
Q ss_pred CCcccEEEEEecCCc
Q 004157 96 TSTKITIYIVTEPVM 110 (771)
Q Consensus 96 ~~~~~~iyIVtE~v~ 110 (771)
...+|||++.
T Consensus 107 -----~~~~vMEdL~ 116 (409)
T PRK12396 107 -----MNCCVMEDLS 116 (409)
T ss_pred -----HhhHHHHhCc
Confidence 4589999984
No 493
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=96.11 E-value=0.04 Score=56.96 Aligned_cols=30 Identities=7% Similarity=0.204 Sum_probs=27.0
Q ss_pred CCceecCCCCCCEEEcC-CCcEEEEccCccc
Q 004157 148 CKLVHGNVCLSSVVVTQ-TLDWKLHAFDVLS 177 (771)
Q Consensus 148 ~~ivH~dIkp~NI~v~~-~G~~KL~dFgla~ 177 (771)
..++|||+++.||+++. ++.+.|+||+++.
T Consensus 170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~ 200 (235)
T cd05157 170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG 200 (235)
T ss_pred EEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence 46999999999999998 5789999999875
No 494
>KOG1967 consensus DNA repair/transcription protein Mms19 [Replication, recombination and repair; Transcription]
Probab=96.10 E-value=0.018 Score=68.33 Aligned_cols=143 Identities=20% Similarity=0.289 Sum_probs=115.8
Q ss_pred hhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHHHHhhcChhhhhhc---cHHHHHhhcCCCcHHHHHHHHHHHHhhccCCC
Q 004157 360 EEFSVKVLPTIVKLFASNDRAIRVALLQHIDQYGQSFSAQVVDEQ---VYPHVATGFADTSAFLREMTLKSMLVLAPKLS 436 (771)
Q Consensus 360 eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~---I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~ 436 (771)
+-|-..|+|.++..|...+-.+|-.+|.-|++.+.+++.+.+..+ ++|.+++++.-.+..+|-.|+..+..+..+..
T Consensus 862 QRfF~~ivP~l~~~~~t~~~~~K~~yl~~LshVl~~vP~~vllp~~~~LlPLLLq~Ls~~D~~v~vstl~~i~~~l~~~~ 941 (1030)
T KOG1967|consen 862 QRFFCDIVPILVSKFETAPGSQKHNYLEALSHVLTNVPKQVLLPQFPMLLPLLLQALSMPDVIVRVSTLRTIPMLLTESE 941 (1030)
T ss_pred HHHHHhhHHHHHHHhccCCccchhHHHHHHHHHHhcCCHHhhccchhhHHHHHHHhcCCCccchhhhHhhhhhHHHHhcc
Confidence 456677999999999977888999999999999999999987765 69999999999999999888877766554433
Q ss_pred ---hhHHhHHHHHHHHhhccCCC---CcchhhHHHHHHHhhhccCcc----hhhHHhHHHHHHhhhcCCCcchhhheee
Q 004157 437 ---QRTISGSLLKYLSKLQVDEE---PAIRTNTTILLGNIASHLNEG----TRKRVLINAFTVRALRDTFSPARGAAKI 505 (771)
Q Consensus 437 ---~~~l~~~LL~~laklq~D~~---~~IRtnt~icl~kia~~L~~~----~~~~vL~~af~~~~lkD~f~~~R~a~l~ 505 (771)
... ...+.|++-.+..|.+ -.||--++-|++.|...+... .|.+| +.|+. +.|.|+.--+|.-|+.
T Consensus 942 tL~t~~-~~Tlvp~lLsls~~~~n~~~~VR~~ALqcL~aL~~~~P~~~l~~fr~~V-l~al~-k~LdDkKRlVR~eAv~ 1017 (1030)
T KOG1967|consen 942 TLQTEH-LSTLVPYLLSLSSDNDNNMMVVREDALQCLNALTRRLPTKSLLSFRPLV-LRALI-KILDDKKRLVRKEAVD 1017 (1030)
T ss_pred ccchHH-HhHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHhccCCCcccccccHHH-HHHhh-hccCcHHHHHHHHHHH
Confidence 333 4579999999999876 689999999999999987643 45665 67777 7899988555554443
No 495
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. Clathrin coats contain both clathrin and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors []. All AP complexes are heterotetramers composed of two large subunits (adaptins), a medium subunit (mu) and a small subunit (sigma). Each subunit has a specific function. Adaptin subunits recognise and bind to clathrin through their hinge region (clathrin box), and recruit accessory proteins that modulate AP function through their C-terminal appendage domains. By contrast, GGAs are monomers composed of four domains, which have functions similar to AP subunits: an N-terminal VHS (Vps27p/Hrs/Stam) domain, a GAT (GGA and Tom1) domain, a hinge region, and a C-terminal GAE (gamma-adaptin ear) domain. The GAE domain is similar to the AP gamma-adaptin ear domain, being responsible for the recruitment of accessory proteins that regulate clathrin-mediated endocytosis []. While clathrin mediates endocytic protein transport from ER to Golgi, coatomers (COPI, COPII) primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the N-terminal domain of various adaptins from different AP clathrin adaptor complexes (including AP1, AP2, AP3 and AP4), and from the beta and gamma subunits of various coatomer (COP) adaptors. This domain has a 2-layer alpha/alpha fold that forms a right-handed superhelix, and is a member of the ARM repeat superfamily []. The N-terminal region of the various AP adaptor proteins share strong sequence identity; by contrast, the C-terminal domains of different adaptins share similar structural folds, but have little sequence identity []. It has been proposed that the N-terminal domain interacts with another uniform component of the coated vesicles. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 1W63_C 2JKR_A 2JKT_A 2XA7_A 2VGL_B 3TJZ_E.
Probab=96.05 E-value=0.056 Score=63.00 Aligned_cols=187 Identities=20% Similarity=0.248 Sum_probs=117.7
Q ss_pred ccCChhhHHhhhhhchhhhcCCChhhhhhhhHHHHHHHHhcCCCCchhhHHHH-HhccCCChhhhhhhhHHHHHHhhcCC
Q 004157 299 NLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALL-KMGSWLSTEEFSVKVLPTIVKLFASN 377 (771)
Q Consensus 299 ~~k~~~eK~~F~~~L~~~l~~fP~~~~~~kILP~Ll~~~~~~~~~~~~L~~ll-~i~~~l~~eef~~~i~P~i~~lF~~~ 377 (771)
...++--+...++-|......-+......++++.+...+... ...++.... .+.......+....+++.+.+++.++
T Consensus 202 ~~~~~~~q~~il~~l~~~~~~~~~~~~~~~~i~~l~~~l~s~--~~~V~~e~~~~i~~l~~~~~~~~~~~~~L~~lL~s~ 279 (526)
T PF01602_consen 202 SDPDPWLQIKILRLLRRYAPMEPEDADKNRIIEPLLNLLQSS--SPSVVYEAIRLIIKLSPSPELLQKAINPLIKLLSSS 279 (526)
T ss_dssp TCCSHHHHHHHHHHHTTSTSSSHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHTSS
T ss_pred cccchHHHHHHHHHHHhcccCChhhhhHHHHHHHHHHHhhcc--ccHHHHHHHHHHHHhhcchHHHHhhHHHHHHHhhcc
Confidence 444454455555544444333333222245666666665521 122222222 22222233446788999999999999
Q ss_pred cHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCC
Q 004157 378 DRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEP 457 (771)
Q Consensus 378 Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~ 457 (771)
|..+|+..|+.|..++.+-.+. +. .....+.....|.+..||..++..+..++..-+-..+.++|+.++..+ .++
T Consensus 280 ~~nvr~~~L~~L~~l~~~~~~~-v~-~~~~~~~~l~~~~d~~Ir~~~l~lL~~l~~~~n~~~Il~eL~~~l~~~---~d~ 354 (526)
T PF01602_consen 280 DPNVRYIALDSLSQLAQSNPPA-VF-NQSLILFFLLYDDDPSIRKKALDLLYKLANESNVKEILDELLKYLSEL---SDP 354 (526)
T ss_dssp SHHHHHHHHHHHHHHCCHCHHH-HG-THHHHHHHHHCSSSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHC-----H
T ss_pred cchhehhHHHHHHHhhcccchh-hh-hhhhhhheecCCCChhHHHHHHHHHhhcccccchhhHHHHHHHHHHhc---cch
Confidence 9999999999999999887343 44 344444455558889999999999999998777778888888887322 256
Q ss_pred cchhhHHHHHHHhhhccCcchhhHHhHHHHHHhhhcCC
Q 004157 458 AIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDT 495 (771)
Q Consensus 458 ~IRtnt~icl~kia~~L~~~~~~~vL~~af~~~~lkD~ 495 (771)
.+|-..+-.|+.|+....... +..+..+. ..++..
T Consensus 355 ~~~~~~i~~I~~la~~~~~~~--~~~v~~l~-~ll~~~ 389 (526)
T PF01602_consen 355 DFRRELIKAIGDLAEKFPPDA--EWYVDTLL-KLLEIS 389 (526)
T ss_dssp HHHHHHHHHHHHHHHHHGSSH--HHHHHHHH-HHHHCT
T ss_pred hhhhhHHHHHHHHHhccCchH--HHHHHHHH-Hhhhhc
Confidence 699999999999999886532 22334444 455543
No 496
>PTZ00429 beta-adaptin; Provisional
Probab=96.05 E-value=0.074 Score=64.18 Aligned_cols=169 Identities=15% Similarity=0.126 Sum_probs=112.6
Q ss_pred hhhccCChhhHHhhhhhchhhhcCCChhhhhhhhHHHHHHHHhcCCCCchhhHHH--HHhccCCChhhhhhhhHHHHHHh
Q 004157 296 EILNLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTAL--LKMGSWLSTEEFSVKVLPTIVKL 373 (771)
Q Consensus 296 ~~l~~k~~~eK~~F~~~L~~~l~~fP~~~~~~kILP~Ll~~~~~~~~~~~~L~~l--l~i~~~l~~eef~~~i~P~i~~l 373 (771)
+++...+..+|..-++.+- ..+-.+.-...+.|..++.+.........|.-+ ...++. ..|-.-.++..+.+-
T Consensus 39 ~~L~s~~~~~kk~alKkvI---a~mt~G~DvS~LF~dVvk~~~S~d~elKKLvYLYL~~ya~~--~pelalLaINtl~KD 113 (746)
T PTZ00429 39 NDLNGTDSYRKKAAVKRII---ANMTMGRDVSYLFVDVVKLAPSTDLELKKLVYLYVLSTARL--QPEKALLAVNTFLQD 113 (746)
T ss_pred HHHHCCCHHHHHHHHHHHH---HHHHCCCCchHHHHHHHHHhCCCCHHHHHHHHHHHHHHccc--ChHHHHHHHHHHHHH
Confidence 4444556666655555432 222222333445666666555443222223222 222221 223344567888888
Q ss_pred hcCCcHHHHHHHHHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhcc
Q 004157 374 FASNDRAIRVALLQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQV 453 (771)
Q Consensus 374 F~~~Dr~iR~~LL~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~ 453 (771)
+.++++-||-..|+.|.. +....+-+.+.+.+..++.|.+|.||..++-++..+...-.+......+++.|.++..
T Consensus 114 l~d~Np~IRaLALRtLs~----Ir~~~i~e~l~~~lkk~L~D~~pYVRKtAalai~Kly~~~pelv~~~~~~~~L~~LL~ 189 (746)
T PTZ00429 114 TTNSSPVVRALAVRTMMC----IRVSSVLEYTLEPLRRAVADPDPYVRKTAAMGLGKLFHDDMQLFYQQDFKKDLVELLN 189 (746)
T ss_pred cCCCCHHHHHHHHHHHHc----CCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhCcccccccchHHHHHHHhc
Confidence 899999999888875543 4445667789999999999999999999999999987655443334567788888888
Q ss_pred CCCCcchhhHHHHHHHhhhc
Q 004157 454 DEEPAIRTNTTILLGNIASH 473 (771)
Q Consensus 454 D~~~~IRtnt~icl~kia~~ 473 (771)
|.++.|..|++..|..|...
T Consensus 190 D~dp~Vv~nAl~aL~eI~~~ 209 (746)
T PTZ00429 190 DNNPVVASNAAAIVCEVNDY 209 (746)
T ss_pred CCCccHHHHHHHHHHHHHHh
Confidence 99999999999999998754
No 497
>KOG1820 consensus Microtubule-associated protein [Cytoskeleton]
Probab=96.04 E-value=0.064 Score=64.79 Aligned_cols=208 Identities=14% Similarity=0.157 Sum_probs=153.5
Q ss_pred hcCCChhhhhhhhHHHHHHHHhcCC--CCchhhHHHHHhccC---CChhhhhhhhHHHHHHhhcCCcHHHHHHHHHhHHH
Q 004157 317 AEQLPRQIVLKKLLPLLASALEFGS--AAAPALTALLKMGSW---LSTEEFSVKVLPTIVKLFASNDRAIRVALLQHIDQ 391 (771)
Q Consensus 317 l~~fP~~~~~~kILP~Ll~~~~~~~--~~~~~L~~ll~i~~~---l~~eef~~~i~P~i~~lF~~~Dr~iR~~LL~~l~~ 391 (771)
.+.+|+.-+..++-|.|...+.... ...-+|..+..+.+. ...+.|...+...+...+.+..-.+-+.-++.|..
T Consensus 242 ~d~l~~~di~~ki~~~l~t~~~s~~WK~R~Eale~l~~~l~e~~~~~~~~~~~ll~~~~ki~~kDaN~~v~~~aa~~l~~ 321 (815)
T KOG1820|consen 242 FDLLPRVDILSKITKNLETEMLSKKWKDRKEALEELVAILEEAKKEIVKGYTGLLGILLKIRLKDANINVVMLAAQILEL 321 (815)
T ss_pred cccCchhhhhhhcChHHHHhhhccchHHHHHHHHHHHHHHhccccccccCcchHHHHHHHHhccCcchhHHHHHHHHHHH
Confidence 3445555566666666666655321 112244444444332 23455777778888888777777888888899999
Q ss_pred HHhhcChhh--hhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHH
Q 004157 392 YGQSFSAQV--VDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGN 469 (771)
Q Consensus 392 ~~~~l~~~~--v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~k 469 (771)
+...+.... +...++|.|+..+.|.-+.+|+.+++++-.++. ..-...+.+.+...-.+..|.+|+-|...+.+
T Consensus 322 ia~~lr~~~~~~~~~v~p~lld~lkekk~~l~d~l~~~~d~~~n----s~~l~~~~~~I~e~lk~knp~~k~~~~~~l~r 397 (815)
T KOG1820|consen 322 IAKKLRPLFRKYAKNVFPSLLDRLKEKKSELRDALLKALDAILN----STPLSKMSEAILEALKGKNPQIKGECLLLLDR 397 (815)
T ss_pred HHHhcchhhHHHHHhhcchHHHHhhhccHHHHHHHHHHHHHHHh----cccHHHHHHHHHHHhcCCChhhHHHHHHHHHH
Confidence 999887653 344589999999999999999999999988777 44456677888887889999999999999999
Q ss_pred hhhccCc----chhhHHhHHHHHHhhhcCCCcchhhheeeeccCCHHHHHHHHHHHHHHHHHHHHH
Q 004157 470 IASHLNE----GTRKRVLINAFTVRALRDTFSPARGAAKILSYLNCDVRSKAFQAVDQFLQIVKQY 531 (771)
Q Consensus 470 ia~~L~~----~~~~~vL~~af~~~~lkD~f~~~R~a~l~a~~~~~~VR~~a~~~~~~~l~~l~~~ 531 (771)
.-..++. ....+-|+|... ...+|.+.++|.||+.+- --.+|--..++++.||..+.+.
T Consensus 398 ~~~~~~~~~~~~~t~~~l~p~~~-~~~~D~~~~VR~Aa~e~~--~~v~k~~Ge~~~~k~L~~~~~~ 460 (815)
T KOG1820|consen 398 KLRKLGPKTVEKETVKTLVPHLI-KHINDTDKDVRKAALEAV--AAVMKVHGEEVFKKLLKDLDKQ 460 (815)
T ss_pred HHhhcCCcCcchhhHHHHhHHHh-hhccCCcHHHHHHHHHHH--HHHHHHhhHHHHHHHHHhhccc
Confidence 8888882 235667899999 899999999999998871 1124666778888888888863
No 498
>cd00020 ARM Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, the junctional plaque protein plakoglobin, the adenomatous polyposis coli (APC) tumor suppressor protein, and a number of other proteins. ARM has been implicated in mediating protein-protein interactions, but no common features among the target proteins recognized by the ARM repeats have been identified; related to the HEAT domain; three consecutive copies of the repeat are represented by this alignment model.
Probab=95.90 E-value=0.012 Score=53.39 Aligned_cols=103 Identities=13% Similarity=0.102 Sum_probs=78.8
Q ss_pred hhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccC---CChhHHhHHHHHHHHhhccCCCCcchhhHHHHHHHhhhccCc
Q 004157 400 VVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPK---LSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASHLNE 476 (771)
Q Consensus 400 ~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~k---L~~~~l~~~LL~~laklq~D~~~~IRtnt~icl~kia~~L~~ 476 (771)
.+...+++.++..+.+.++.+|+.++..+..++.. .....+...+++.|.++-.|+++.+|-+++-||+.|+..-..
T Consensus 3 ~~~~~~i~~l~~~l~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~ 82 (120)
T cd00020 3 VIQAGGLPALVSLLSSSDENVQREAAWALSNLSAGNNDNIQAVVEAGGLPALVQLLKSEDEEVVKAALWALRNLAAGPED 82 (120)
T ss_pred HHHcCChHHHHHHHHcCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCChHHHHHHHhCCCHHHHHHHHHHHHHHccCcHH
Confidence 45667899999999999999999999999988854 333445558999999998999999999999999999986532
Q ss_pred ch---hhHHhHHHHHHhhhcCCCcchhhhe
Q 004157 477 GT---RKRVLINAFTVRALRDTFSPARGAA 503 (771)
Q Consensus 477 ~~---~~~vL~~af~~~~lkD~f~~~R~a~ 503 (771)
.. ...-+++.+. +.|.+....+|..+
T Consensus 83 ~~~~~~~~g~l~~l~-~~l~~~~~~~~~~a 111 (120)
T cd00020 83 NKLIVLEAGGVPKLV-NLLDSSNEDIQKNA 111 (120)
T ss_pred HHHHHHHCCChHHHH-HHHhcCCHHHHHHH
Confidence 11 1122477777 78887765544443
No 499
>KOG0213 consensus Splicing factor 3b, subunit 1 [RNA processing and modification]
Probab=95.90 E-value=0.021 Score=65.99 Aligned_cols=190 Identities=17% Similarity=0.203 Sum_probs=127.1
Q ss_pred hhhhhchhhhcCCChhhhhhhhHHHHHHHHhcCCCCchhhHHHHHhccCCCh--hhhhhhhHHHHHHhhcCCcHHHHHHH
Q 004157 308 TFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLST--EEFSVKVLPTIVKLFASNDRAIRVAL 385 (771)
Q Consensus 308 ~F~~~L~~~l~~fP~~~~~~kILP~Ll~~~~~~~~~~~~L~~ll~i~~~l~~--eef~~~i~P~i~~lF~~~Dr~iR~~L 385 (771)
.-++.|.+....|-.+.+-++|||.|++.---+.....++..+..|--.|+. --|..+|+=.|-++.-..|.-.|..=
T Consensus 382 ~~LR~ltdkar~~ga~~lfnqiLpllMs~tLeDqerhllVkvidriLyklDdlvrpYVhkILvViepllided~yar~eg 461 (1172)
T KOG0213|consen 382 SALRILTDKARNFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEG 461 (1172)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHcCccccchhhhhHHHHHHHHHHhhcccchhceeeeEEEeecceecchHHHhhch
Confidence 3444555555667777788899999887433333344444555555555554 45777777777777777776666554
Q ss_pred HHhHHHHHhhcChhhhhhccHHHHHhhcCCCcHHHHHHHHHHHHhhccCCChhHHhHHHHHHHHhhccCC-CCcchhhHH
Q 004157 386 LQHIDQYGQSFSAQVVDEQVYPHVATGFADTSAFLREMTLKSMLVLAPKLSQRTISGSLLKYLSKLQVDE-EPAIRTNTT 464 (771)
Q Consensus 386 L~~l~~~~~~l~~~~v~~~I~p~l~~gf~D~~~~iRe~tlk~i~~l~~kL~~~~l~~~LL~~laklq~D~-~~~IRtnt~ 464 (771)
.+-+..++....=..+-..+ =--|...++.||+.|.++...++..|.-. +|||+|..++.-. .-.-|-..+
T Consensus 462 reIisnLakaaGla~mistm----rpDidn~deYVRnttarafavvasalgip----~llpfLkavc~SkkSwqaRhTgI 533 (1172)
T KOG0213|consen 462 REIISNLAKAAGLATMISTM----RPDIDNKDEYVRNTTARAFAVVASALGIP----ALLPFLKAVCGSKKSWQARHTGI 533 (1172)
T ss_pred HHHHHHHHHHhhhHHHHHhh----cCCcccccHHHHHHHHHHHHHHHHHhCcH----HHHHHHHHHhccccchhhhchhh
Confidence 44444444433332222212 22356678999999999999999999865 4889998887643 445566667
Q ss_pred HHHHHhhhccCcc--hhhHHhHHHHHHhhhcCCCcchhhheeee
Q 004157 465 ILLGNIASHLNEG--TRKRVLINAFTVRALRDTFSPARGAAKIL 506 (771)
Q Consensus 465 icl~kia~~L~~~--~~~~vL~~af~~~~lkD~f~~~R~a~l~a 506 (771)
-|+.+||-.++-+ ...+-|+..+. ..|+|....+|.-+-.+
T Consensus 534 kivqqIail~Gcsvlphl~~lv~ii~-~gl~De~qkVR~itAla 576 (1172)
T KOG0213|consen 534 KIVQQIAILSGCSVLPHLKPLVKIIE-HGLKDEQQKVRTITALA 576 (1172)
T ss_pred HHHHHHHHHhcchhhhhhHHHHHHHH-HhhcccchhhhhHHHHH
Confidence 7777777777755 34566788999 99999999999877666
No 500
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=95.88 E-value=0.082 Score=53.65 Aligned_cols=119 Identities=16% Similarity=0.199 Sum_probs=78.0
Q ss_pred CCCCCCC-CceEEEEeEECCCCCcEEEEEEeCCC--------------CchhHHHHHHHHHHHHhcCC------CCCeeE
Q 004157 25 DPYPSAW-GSWSHFQGTSKDDGSPVSIFSISGTN--------------AQDGHLAAARNGVKRLRTVR------HPNILA 83 (771)
Q Consensus 25 e~ig~G~-g~wtVy~g~~k~~g~~VaIK~~~~~~--------------~~~~~~~~~~~ei~~Lk~Lr------HPnIlk 83 (771)
..|+.|+ - .+|.- .+.....||+..... .........++|++....+. +.+|-+
T Consensus 7 ~~i~~G~~R--~cy~H---P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r 81 (199)
T PF10707_consen 7 DLIAQGGER--DCYQH---PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPR 81 (199)
T ss_pred cccccCCCc--eEEEC---CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccccccc
Confidence 3567776 4 45543 245667789987654 00112445666777777666 888999
Q ss_pred EeeeEEecccCcCCcccEEEEEecCCc--------chHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCceecCC
Q 004157 84 FLHSTEVENIDATSTKITIYIVTEPVM--------PLSEKIKELGLEGSQRDEYYAWGLNQIAKAVSFLNNDCKLVHGNV 155 (771)
Q Consensus 84 v~d~~e~e~~d~~~~~~~iyIVtE~v~--------~L~~~L~~~~~~~~~~~~~i~~gl~QI~~aL~fLH~~~~ivH~dI 155 (771)
+++..+++- -..+|+|.+. +|.+++++..... .+ ...+-.-..+|-. .+|+.+|+
T Consensus 82 ~~G~veT~~--------G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~-----~~---~~~L~~f~~~l~~-~~Iv~~dl 144 (199)
T PF10707_consen 82 FYGFVETNL--------GLGLVVELIRDADGNISPTLEDYLKEGGLTE-----EL---RQALDEFKRYLLD-HHIVIRDL 144 (199)
T ss_pred EeEEEecCC--------ceEEEEEEEECCCCCcCccHHHHHHcCCccH-----HH---HHHHHHHHHHHHH-cCCeecCC
Confidence 999999853 5789999982 3888886654321 22 2223333445553 78999999
Q ss_pred CCCCEEEcCC
Q 004157 156 CLSSVVVTQT 165 (771)
Q Consensus 156 kp~NI~v~~~ 165 (771)
+|.||++...
T Consensus 145 ~~~NIv~~~~ 154 (199)
T PF10707_consen 145 NPHNIVVQRR 154 (199)
T ss_pred CcccEEEEec
Confidence 9999999643
Done!