Query 004159
Match_columns 771
No_of_seqs 166 out of 730
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 16:09:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004159.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004159hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a01_A Proton pyrophosphatase; 100.0 2E-266 6E-271 2215.4 54.1 766 1-770 1-766 (766)
2 4av3_A K(+)-stimulated pyropho 100.0 5E-250 2E-254 2102.5 48.7 679 13-762 14-732 (735)
3 2dae_A KIAA0733 protein; mitog 35.2 32 0.0011 29.7 3.7 39 606-644 11-53 (75)
4 4f0a_B Protein WNT-8, XWNT-8; 27.6 37 0.0013 36.3 3.5 23 597-619 18-40 (316)
5 4a01_A Proton pyrophosphatase; 23.1 4.3E+02 0.015 31.6 11.3 141 144-300 573-740 (766)
6 2keb_A DNA polymerase subunit 20.6 11 0.00037 34.4 -1.9 50 586-644 11-60 (101)
7 3hd7_A Vesicle-associated memb 18.6 2E+02 0.0069 25.1 5.8 40 75-114 42-85 (91)
8 4av3_A K(+)-stimulated pyropho 18.2 65 0.0022 38.2 3.3 140 144-300 551-714 (735)
9 3din_C Preprotein translocase 17.7 98 0.0033 34.3 4.5 88 574-665 298-385 (431)
10 3fss_A Histone chaperone RTT10 17.5 92 0.0031 32.2 3.8 32 610-643 99-130 (237)
No 1
>4a01_A Proton pyrophosphatase; hydrolase, membrane protein, proton pumping; HET: DMU; 2.35A {Vigna radiata}
Probab=100.00 E-value=1.8e-266 Score=2215.45 Aligned_cols=766 Identities=92% Similarity=1.375 Sum_probs=699.5
Q ss_pred CCCccCchhhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcCCCCCCCCCCCCCCCCCCcchhhhhccCCcccccHHHHH
Q 004159 1 MGAAILPDLGAEILIPVCAVIGIAFALVQWVLVSNIKLSPARDASGNSPGAGGGKNGCTDYLIEEEEGLNDHNVVIKCAE 80 (771)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~gl~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~g~~~~~~~~~m~~ 80 (771)
||.++||+..+..++++++++|++||+++|++|+|+++++++ +.++..+++||..||+.++++|+++|+..+||||
T Consensus 1 ~~~~~~~~~~~~~~i~~~~~~Gi~fa~~~~~~vs~v~~~~~~----~~~~~~~~~~g~~~~l~~~~~g~~~~~~~~~m~e 76 (766)
T 4a01_A 1 MGAAILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVR----DASPNAAAKNGYNDYLIEEEEGINDHNVVVKCAE 76 (766)
T ss_dssp -CCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCC-----------------------------CCHHHHHHHH
T ss_pred CCcchhhhhhhhhHhHHHHHHHHHHHHHHHHheEeEEecCCc----cccccccccCCcccccchhhcccchHHHHHHHHH
Confidence 789999999999999999999999999999999999985432 1222334678888999999999888888899999
Q ss_pred HHHHHHHhHHHHHHhhhhhhHHHHHHHHHHHHHHhhccccccccCCCccCCCccCCcchhhhhhHHHHHHHHHHHHHHHh
Q 004159 81 IQSAISEGATSFLFTEYQYVGVFMVAFAILIFLFLGSVEGFSTKSQACTYDPFKMCKPALATAAFSTVSFLLGGITSVVS 160 (771)
Q Consensus 81 Ia~~I~eGA~afL~~qyk~i~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fl~Ga~~S~la 160 (771)
||++|||||++||+||||++++|+++++++++++++...++++++|++.+++.++|.+.+..+++++++|++|+++|.++
T Consensus 77 Ia~aI~eGA~afL~rqYk~i~~~~vv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Fl~Ga~~S~~a 156 (766)
T 4a01_A 77 IQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQACSYDKTKTCKPALATAIFSTVSFLLGGVTSLVS 156 (766)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTCCCCEEETTEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccchhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998877665666777778888777778888888899999999999999999
Q ss_pred hhhhhhhhhhhhHhhHHHHhcChhHHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcCCCcchhhhhHHhhchhhHH
Q 004159 161 GFLGMKIATFANARTTLEARKGVGKAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWSGLFEAITGYGLGGSS 240 (771)
Q Consensus 161 G~iGM~vat~aNvRta~AA~~~~~~al~vafrgGsVmGl~vvglgLl~l~~~~~~~~~~~~~~~~~~~~~l~gfg~GaS~ 240 (771)
||+|||+|||||+|||+|||+++++||++|||+|+||||+|+|++|++++++|++|..++++++.+.++++.||+||+|+
T Consensus 157 G~iGM~vat~ANvRtA~AA~~gl~~al~vAfr~GaVmGl~vvglgLlgl~~~~~~~~~~~~~~~~~~~~~l~Gfg~GaS~ 236 (766)
T 4a01_A 157 GFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSS 236 (766)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHhhcchhHHH
Confidence 99999999999999999999999999999999999999999999999999999998766666655677899999999999
Q ss_pred HHHHHHHhcccccchhhccccccchhccCCCCCCCCCccccccccccccccccccchhhhhhHHHHHHHHHHHHHhhhcc
Q 004159 241 MALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFG 320 (771)
Q Consensus 241 iALFaRvGGGIyTKAADVGADLVGKVEagIPEDDPRNPavIADnVGDNVGD~AGmgADLFESy~~si~aamilg~~~~~~ 320 (771)
+|||+||||||||||||||||||||||+|||||||||||||||||||||||||||+|||||||++++++||+|+....+.
T Consensus 237 iAlFaRvGGGIyTKAADVGADLVGKVEagIPEDDPRNPAvIADnVGDNVGD~AGmgADLFESy~~t~iaamvlg~~~~~~ 316 (766)
T 4a01_A 237 MALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFG 316 (766)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCTTCTTHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHTSHHH
T ss_pred HHHHHHhccchhhhhhhhccccccccccCCCCcCCCCcchhhhhhccccccccccchhHHHHHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999854222
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHhhhhhhhhccccChHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCcc
Q 004159 321 INHELTAMLYPLLISSAGIIVCLITTLFATDIFEIKAVKEIEPSLKKQLIISTVLMTVAIAIVSWIALPSSFTIFNFGSQ 400 (771)
Q Consensus 321 ~~~~~~~v~~PLli~a~gi~~siig~~~v~~~~~~~~~~~~~~aL~~g~~vs~il~~i~~~~~~~~~l~~~~~~~~~g~~ 400 (771)
.+..+..++|||+++++||++|++|++++|.+++.++++|+|++||+|+|+|++++++++|++++|++|+.+.....++.
T Consensus 317 ~~~~~~~v~~PL~i~a~gii~siig~~~v~~~~~~~~~~~~~~aL~~g~~~s~il~~v~~~~~~~~~l~~~~~~~~~~~~ 396 (766)
T 4a01_A 317 LNHELTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQ 396 (766)
T ss_dssp HTTCHHHHTHHHHHHHHHHHHHHHHHHHHHTTCCCCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSEEEEEETTEE
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHhheeEeeccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccc
Confidence 12245679999999999999999999999877777778899999999999999999999999999999976654322222
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHhhcccCchhHHHHHhhhhhhhhHHHHHHHHHHHHHHHHH
Q 004159 401 KVVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSF 480 (771)
Q Consensus 401 ~~~~~~~~f~~~~~Gl~~g~lI~~~TeYyTs~~y~PVr~IA~as~tG~AtnII~Gla~Gm~St~~Pvl~i~~ai~~sy~l 480 (771)
....||++|+|+++|+++|++|+++||||||++|||||+||++|+||||||||+||++||+||++|+++|++++++||++
T Consensus 397 ~~~~~~~~f~~~~~Gl~~g~lI~~iTeYyTs~~~~PV~~IA~aS~TG~ATnII~GlavGm~St~~Pvl~i~~ai~~sy~l 476 (766)
T 4a01_A 397 KDVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTF 476 (766)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSHHHHHHHHHGGGCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHhCcCchhhHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhheeccccccccCcchhHHhcCCChHHHHHhhhhhhcCCccccccchhhHHHHHHHHHHHH
Q 004159 481 AAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALF 560 (771)
Q Consensus 481 ~GlyGiAiAa~GMLst~~i~la~DayGPIaDNAgGIAEMs~l~~eVR~~td~LDavGNTTaAi~KGfAIGSAaL~aLaLf 560 (771)
+|+||+|+||+|||||++++|++|+||||+||||||||||+||||||||||+||++||||||++||||||||+|+||+||
T Consensus 477 ~glyGiAlAa~GMLst~g~~lAvDayGPIaDNAGGIAEMs~l~~eVR~~TD~LDavGNTTaAi~KGfAIGSAaL~AlaLf 556 (766)
T 4a01_A 477 AAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALF 556 (766)
T ss_dssp HHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhheeeeeccCCcccCcccHHHHccCcHHHHHHHHhhhhccCchhhhccchhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcccccccCChhHHHHHHhhhhHHHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCChhHHHHHHHH
Q 004159 561 GAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTD 640 (771)
Q Consensus 561 ~ay~~~~~~~~~~l~~p~vl~GlliG~mlpflFsal~m~aVg~aA~~mV~EVRRQFreipGi~eg~~kPDY~~cV~I~T~ 640 (771)
++|+++.++..+|+.||+|++|+|+|+|+|||||+++|+||||||++||||||||||||||||||++||||+||||||||
T Consensus 557 ~ay~~~~~~~~~~l~~P~Vl~GlliG~mlpflFsa~tm~AVg~AA~~mV~EVRRQFreipGImeg~~kPDY~rcV~I~T~ 636 (766)
T 4a01_A 557 GAFVSRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTD 636 (766)
T ss_dssp HHHHHHTTCSCCBSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTTTTSSCCCHHHHHHHHHH
T ss_pred HHHHHHhccceeecCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCChHHHHHHHHH
Confidence 99999998888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcchhhHHHHhhHHHHHhhhhhHHHHHhhHHHHHHHHHHHHhhcccchhhhhhHHHhhccccccccCCCCCCccc
Q 004159 641 ASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPH 720 (771)
Q Consensus 641 ~AlkeMi~Pgllail~Pi~vG~~~G~~al~G~L~G~~vsG~~~Ai~m~NaGGAWDNAKKyIE~G~~~~~~~~ggKGS~aH 720 (771)
+||||||+|+++++++|+++|++||+++++|+|+|++++|++||+||+|+||||||||||||+|..++++++||||||+|
T Consensus 637 aAlkeMi~Pgllav~~Pi~vG~~lG~~al~G~L~G~~vsGv~~Ai~maNaGGAWDNAKKyIE~G~~~~~~~~ggKGSeaH 716 (766)
T 4a01_A 637 ASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDCH 716 (766)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHTTCSTTSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccchhHHhHHHHHHccccccccccCCCCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999996555566899999999
Q ss_pred cCcccccccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhccchhcc
Q 004159 721 KAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIW 770 (771)
Q Consensus 721 kAaVvGDTVGDP~KDTsGPslniLIKlm~ivslV~ap~~~~~~~~~~~~~ 770 (771)
||||||||||||||||||||||||||||++|||||+|+|.+|+|+++|+|
T Consensus 717 kAaVvGDTVGDPfKDTsGPslNiLIKlm~ivsLv~ap~~~~~~g~~~~~~ 766 (766)
T 4a01_A 717 KAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIF 766 (766)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC
T ss_pred cccccCCCCCCCccccccchHhHHHHHHHHHHHHHHHHHHHcCCeeeecC
Confidence 99999999999999999999999999999999999999999889988875
No 2
>4av3_A K(+)-stimulated pyrophosphate-energized sodium PU; hydrolase, membrane pyrophosphotase, ION pump; 2.60A {Thermotoga maritima} PDB: 4av6_A
Probab=100.00 E-value=4.6e-250 Score=2102.48 Aligned_cols=679 Identities=42% Similarity=0.699 Sum_probs=596.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCcCCCCCCCCCCCCCCCCCCcchhhhhccCCcccccHHHHHHHHHHHHhHHHH
Q 004159 13 ILIPVCAVIGIAFALVQWVLVSNIKLSPARDASGNSPGAGGGKNGCTDYLIEEEEGLNDHNVVIKCAEIQSAISEGATSF 92 (771)
Q Consensus 13 ~~~~~~~~~gl~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~g~~~~~~~~~m~~Ia~~I~eGA~af 92 (771)
.+.+++++++|+|++++++||+|++ +| |||||||+++|||||++|
T Consensus 14 ~l~~~~~i~~l~~a~~~~~~v~~~~-----------------------------~G------~~~M~eIa~~I~eGA~af 58 (735)
T 4av3_A 14 ALFFLIPLVALGFAAANFAAVVRKP-----------------------------EG------TERMKEISSYIRSGADSF 58 (735)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHTSC-----------------------------C-------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC-----------------------------CC------CHHHHHHHHHHHHHHHHH
Confidence 3445678999999999999999943 57 999999999999999999
Q ss_pred HHhhhhhhHHHHHHHHHHHHHHhhccccccccCCCccCCCccCCcchhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q 004159 93 LFTEYQYVGVFMVAFAILIFLFLGSVEGFSTKSQACTYDPFKMCKPALATAAFSTVSFLLGGITSVVSGFLGMKIATFAN 172 (771)
Q Consensus 93 L~~qyk~i~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Fl~Ga~~S~laG~iGM~vat~aN 172 (771)
|+||||++++|+++++++++++.+ |+++++|++|++||.+|||+|||+|||+|
T Consensus 59 L~rqyk~i~~~~vv~~~ll~~~~~---------------------------~~~ai~Fl~Ga~~S~~aGyiGM~vAt~AN 111 (735)
T 4av3_A 59 LAHETKAIFKVAIVIAILLMIFTT---------------------------WQTGVAFLLGAVMSASAGIVGMKMATRAN 111 (735)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC---------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh---------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998876543 57999999999999999999999999999
Q ss_pred HhhHHHHhc--ChhHHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcCC-------------CcchhhhhHHhhchh
Q 004159 173 ARTTLEARK--GVGKAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGD-------------DWSGLFEAITGYGLG 237 (771)
Q Consensus 173 vRta~AA~~--~~~~al~vafrgGsVmGl~vvglgLl~l~~~~~~~~~~~~~-------------~~~~~~~~l~gfg~G 237 (771)
+|||+|||+ ++++||++|||||+||||+|+||+||+++++|++|..++++ +..+.++++.||+||
T Consensus 112 vRTA~AA~~s~~l~~aL~vAFrgGaVmGl~vvgl~Llgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Gfg~G 191 (735)
T 4av3_A 112 VRVAEAARTTKKIGPALKVAYQGGSVMGLSVGGFALLGLVLVYLIFGKWMGQVDNLNIYTNWLGINFVPFAMTVSGYALG 191 (735)
T ss_dssp HHHHHHTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCHHHHCSCEECTTSCEECHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCccHHHHhhhccchHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccchhhhHHHhhhchh
Confidence 999999984 58999999999999999999999999999999998643221 123456789999999
Q ss_pred hHHHHHHHHHhcccccchhhccccccchhccCCCCCCCCCccccccccccccccccccchhhhhhHHHHHHHHHHHHHhh
Q 004159 238 GSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASIS 317 (771)
Q Consensus 238 aS~iALFaRvGGGIyTKAADVGADLVGKVEagIPEDDPRNPavIADnVGDNVGD~AGmgADLFESy~~si~aamilg~~~ 317 (771)
+|++|||+|||||||||+||||||||||||+|||||||||||||||||||||||||||||||||||+++++++|+|++..
T Consensus 192 aS~iALFaRvGGGIyTKaADVGADLVGKVEagIPEDDPRNPAvIADNVGDNVGDvAGMgADLFESY~~sivAamvL~~~~ 271 (735)
T 4av3_A 192 CSIIAMFDRVGGGVYTKAADMAADLVGKTELNLPEDDPRNPATIADNVGDNVGDVAGLGADLLESFVGAIVSSIILASYM 271 (735)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTTSCC-----------CCTTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcceeccccccchhhhhhhcCCCCCCCCCCchhhhhcccccccccccccchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred hcccc--------------cccchhHHHHHHHHHHHHHHHHHHHhhhhhhhhccccChHHHHHHHHHHHHHHHHHHHHHH
Q 004159 318 SFGIN--------------HELTAMLYPLLISSAGIIVCLITTLFATDIFEIKAVKEIEPSLKKQLIISTVLMTVAIAIV 383 (771)
Q Consensus 318 ~~~~~--------------~~~~~v~~PLli~a~gi~~siig~~~v~~~~~~~~~~~~~~aL~~g~~vs~il~~i~~~~~ 383 (771)
+.... .....++|||+++++|+++|++|++++|. .+++++++++|++++|+++++++++++++
T Consensus 272 ~~~~~~~~g~~~~~~~~~~~~~~~~~~Pl~i~~~gii~SiiG~~~v~~---~~~~~~~~~~l~~~~~~s~~~s~i~~~~~ 348 (735)
T 4av3_A 272 FPIYVQKIGENLVHQVPKETIQALISYPIFFALVGLGCSMLGILYVIV---KKPSDNPQRELNISLWTSALLTVVLTAFL 348 (735)
T ss_dssp HHHTEEEETTEEEESSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---SCCCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhheeee---cccccchhHHHhhhHHhhHHHHHHHHHHH
Confidence 21000 01224789999999999999999999752 23467899999999999999999999999
Q ss_pred HHHhcCccccccccCcccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHhhcccCchhHHHHHhhhhhhhh
Q 004159 384 SWIALPSSFTIFNFGSQKVVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSV 463 (771)
Q Consensus 384 ~~~~l~~~~~~~~~g~~~~~~~~~~f~~~~~Gl~~g~lI~~~TeYyTs~~y~PVr~IA~as~tG~AtnII~Gla~Gm~St 463 (771)
+++++|+...... ......+|++|+|+++|+++|++|+++||||||++|||||||||+|+||||||||+||++||+||
T Consensus 349 ~~~~l~~~~~~~~--~~~~~~~~~~f~~~~iGlv~g~lI~~iTEYYTs~~~~PVr~IA~aS~TG~ATnII~GLavGm~St 426 (735)
T 4av3_A 349 TYFYLKDLQGLDV--LGFRFGAISPWFSAIIGIFSGILIGFWAEYYTSYRYKPTQFLGKSSIEGTGMVISNGLSLGMKSV 426 (735)
T ss_dssp HHHHHTTCSSHHH--HTCTTGGGHHHHHHHHHHHHHHHHHHHHHHHHCTTSHHHHHHHHHGGGCHHHHHHHHHHHHHHHT
T ss_pred HHHHhhhhhhccc--ccccccchHHHHHHHHHHHHHHHHHHheeeecCCCCchHHHHHHhCCCcHHHHHHHHHHHHHHHH
Confidence 9999986432211 01234578999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhheeccccccccCcchhHHhcCCChHHHHHhhhhhhcCCccccc
Q 004159 464 IIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAI 543 (771)
Q Consensus 464 ~~Pvl~i~~ai~~sy~l~GlyGiAiAa~GMLst~~i~la~DayGPIaDNAgGIAEMs~l~~eVR~~td~LDavGNTTaAi 543 (771)
++|+++|+++|+.||+++|+||+|+||+|||||+++++++|+||||+||||||||||+|||||||+||+||++||||||+
T Consensus 427 ~~pvl~I~~~I~~s~~~aGlyGiaiAa~GMLst~gi~lAvDayGPIaDNAGGIAEMs~l~~eVR~~TD~LDavGNTTkAi 506 (735)
T 4av3_A 427 FPPTLTLVLGILFADYFAGLYGVAIAALGMLSFVATSVSVDSYGPIADNAGGISEMCELDPEVRKITDHLDAVGNTTAAI 506 (735)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccceEeeecccCccCCccchHHHccCChHHHHhhhcccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhh-----------cccccccCChhHHHHHHhhhhHHHHHHHHhHHHHHHHHHHHHHHH
Q 004159 544 GKGFAIGSAALVSLALFGAFVSRA-----------AISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEV 612 (771)
Q Consensus 544 ~KGfAIGSAaL~aLaLf~ay~~~~-----------~~~~~~l~~p~vl~GlliG~mlpflFsal~m~aVg~aA~~mV~EV 612 (771)
+||||||||+|+||+||++|+++. ....+|+.||+|++|+|+|+|+|||||+++|+||||||++|||||
T Consensus 507 ~KGfAIGSAaL~AlaLfaay~~~~~~~~~~~~~~~~~~~~~l~~P~VlvGlliGgmlpflFsaltm~AVgrAA~~mV~EV 586 (735)
T 4av3_A 507 GKGFAIGSAIFAALSLFASYMFSQISPSDIGKPPSLVLLLNMLDARVIAGALLGAAITYYFSGYLISAVTKAAMKMVDEI 586 (735)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCGGGSSSCGGGTSCCBTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred ccchhHhHHHHHHHHHHHHHHHHHhhhhhhccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998542 123589999999999999999999999999999999999999999
Q ss_pred HHhhccCCCCCCCCCCCChhHHHHHHHHHHHhhhcchhhHHHHhhHHHHHhhhhhHHHHHhhHHHHHHHHHHHHhhcccc
Q 004159 613 RRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGG 692 (771)
Q Consensus 613 RRQFreipGi~eg~~kPDY~~cV~I~T~~AlkeMi~Pgllail~Pi~vG~~~G~~al~G~L~G~~vsG~~~Ai~m~NaGG 692 (771)
||||||||||||||+||||+||||||||+|||||++|++++|++|+++|+++|+++++|||+|.+++|++||+||+|+||
T Consensus 587 RRQFreipGimeg~~kPdy~~cV~I~T~~AlkeMi~p~~l~v~~P~~vg~~~g~~~l~g~L~g~~v~G~~~Ai~m~n~GG 666 (735)
T 4av3_A 587 RRQAREIPGLLEGKAKPDYNRCIEITSDNALKQMGYPAFIAILTPLVTGFLLGAEFVGGVLIGTVLSGAMLAILTANSGG 666 (735)
T ss_dssp ------------------CHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCCcccCCCCCChHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHhhccccccccCCCCCCccccCcccccccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhh
Q 004159 693 AWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATH 762 (771)
Q Consensus 693 AWDNAKKyIE~G~~~~~~~~ggKGS~aHkAaVvGDTVGDP~KDTsGPslniLIKlm~ivslV~ap~~~~~ 762 (771)
||||||||||+|+++ .+|||||+|||||||||||||||||||||||||||+|++||||++|+|..+
T Consensus 667 AWDNAKK~iE~G~~g----~~gKgS~aHkAaVvGDTVGDPfKDTsGPslN~lIKl~~~vslv~ap~~~~~ 732 (735)
T 4av3_A 667 AWDNAKKYLEAGNLE----GYGKGSEPHKALVIGDTVGDPLKDTVGPSLDILIKIMSVVSVIAVSIFKHV 732 (735)
T ss_dssp HHHHHHHHHHTSCSS----SCCSSSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhHHhhccCCCC----CCCCCChhhcCcccCCCCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999861 238999999999999999999999999999999999999999999999874
No 3
>2dae_A KIAA0733 protein; mitogen-activated protein kinase kinase kinase 7 interacting protein 2, MAP3K7IP2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.15 E-value=32 Score=29.72 Aligned_cols=39 Identities=13% Similarity=0.457 Sum_probs=29.4
Q ss_pred HHHHHHHHHhhccCCCCCC----CCCCCChhHHHHHHHHHHHh
Q 004159 606 LKMVEEVRRQFNTIPGLME----GTAKPDYATCVKISTDASIK 644 (771)
Q Consensus 606 ~~mV~EVRRQFreipGi~e----g~~kPDY~~cV~I~T~~Alk 644 (771)
++|+.|+|+.|.|+|--.- -+..-+-+.|.++-+|-+=|
T Consensus 11 ~qvfheLkQrFPEvPd~VVsqc~~qN~~Nl~aC~~~L~qES~k 53 (75)
T 2dae_A 11 FQVLHDLRQKFPEVPEVVVSRCMLQNNNNLDACCAVLSQESTR 53 (75)
T ss_dssp HHHHHHHHHHSSSSCHHHHHHHHTTTTSCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCcHHHHHHHHHHhccCHHHHHHHHHHhccc
Confidence 5899999999999984210 13456778999998887765
No 4
>4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis}
Probab=27.56 E-value=37 Score=36.25 Aligned_cols=23 Identities=30% Similarity=0.211 Sum_probs=21.2
Q ss_pred hHHHHHHHHHHHHHHHHHhhccC
Q 004159 597 TMKSVGSAALKMVEEVRRQFNTI 619 (771)
Q Consensus 597 ~m~aVg~aA~~mV~EVRRQFrei 619 (771)
.|.+|+++|..-|+|++.|||..
T Consensus 18 ~~~~v~~Ga~~~i~ECq~QFr~~ 40 (316)
T 4f0a_B 18 YSASVAVGAQNGIEECKYQFAWE 40 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Confidence 58999999999999999999964
No 5
>4a01_A Proton pyrophosphatase; hydrolase, membrane protein, proton pumping; HET: DMU; 2.35A {Vigna radiata}
Probab=23.13 E-value=4.3e+02 Score=31.56 Aligned_cols=141 Identities=20% Similarity=0.326 Sum_probs=85.3
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhhhhhHhhHHHHhcC---------------hhHHHHhhccccchhHHHHHHHHHHH
Q 004159 144 AFSTVSFLLGGITSVVSGFLGMKIATFANARTTLEARKG---------------VGKAFIVAFRSGAVMGFLLAANGLLV 208 (771)
Q Consensus 144 ~~~~~~Fl~Ga~~S~laG~iGM~vat~aNvRta~AA~~~---------------~~~al~vafrgGsVmGl~vvglgLl~ 208 (771)
+.+.+..++|+..-.+=.-..|+-=.|+--|..+.-||. +.+..+++-|+ +.-.|.+-+ ++.
T Consensus 573 P~Vl~GlliG~mlpflFsa~tm~AVg~AA~~mV~EVRRQFreipGImeg~~kPDY~rcV~I~T~a-AlkeMi~Pg--lla 649 (766)
T 4a01_A 573 PKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDA-SIKEMIPPG--ALV 649 (766)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTTTTSSCCCHHHHHHHHHHH-HHHHTHHHH--HHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCChHHHHHHHHHH-HHHHHHHHH--HHH
Confidence 367888999998888877777777677766666655432 44455555442 222333222 111
Q ss_pred HH--HHH-HHHhhhcCCCcchhhhhHHhhchhhHHHHHHHHHhcccccchhhccccccchhccCC---------CCCCCC
Q 004159 209 LF--IAI-NLFKLYYGDDWSGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNI---------PEDDPR 276 (771)
Q Consensus 209 l~--~~~-~~~~~~~~~~~~~~~~~l~gfg~GaS~iALFaRvGGGIyTKAADVGADLVGKVEagI---------PEDDPR 276 (771)
+. ++. +++ +. ..+--.+.|--.-+-+.|+|.--+||-+-.|=.. +|.|- .-.|+.
T Consensus 650 v~~Pi~vG~~l----G~--~al~G~L~G~~vsGv~~Ai~maNaGGAWDNAKKy-------IE~G~~~~~~~~ggKGSeaH 716 (766)
T 4a01_A 650 MLTPLVVGILF----GV--ETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKY-------IEAGASEHARSLGPKGSDCH 716 (766)
T ss_dssp HHHHHHHHHHT----CH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHCCSHHHHTTCSTTSHHH
T ss_pred HHHHHHHHHHh----hH--HHHHHHHHHHHHHHHHHHHHHhccchhHHhHHHH-------HHccccccccccCCCCchhh
Confidence 11 111 111 11 1112334454555668899999999999766532 57662 223455
Q ss_pred Cccccccccccccccccccchhhh
Q 004159 277 NPAVIADNVGDNVGDIAGMGSDLF 300 (771)
Q Consensus 277 NPavIADnVGDNVGD~AGmgADLF 300 (771)
.-+|+.|.|||=-=|-+|..-+.-
T Consensus 717 kAaVvGDTVGDPfKDTsGPslNiL 740 (766)
T 4a01_A 717 KAAVIGDTIGDPLKDTSGPSLNIL 740 (766)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred cccccCCCCCCCccccccchHhHH
Confidence 579999999999999999877644
No 6
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=20.65 E-value=11 Score=34.40 Aligned_cols=50 Identities=14% Similarity=0.192 Sum_probs=26.8
Q ss_pred hhhHHHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCChhHHHHHHHHHHHh
Q 004159 586 GAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIK 644 (771)
Q Consensus 586 G~mlpflFsal~m~aVg~aA~~mV~EVRRQFreipGi~eg~~kPDY~~cV~I~T~~Alk 644 (771)
|..+-.+|-+--|.+|. .+++++||.|. ||- = +..-.+||+++|..+.|.
T Consensus 11 ~~~~~~~~~~~~~~~Vs------ae~L~eEfdef-Gi~-~-~d~VldKc~ELC~~y~ld 60 (101)
T 2keb_A 11 GSSLEVLFQGPGSMSAS------AQQLAEELQIF-GLD-C-EEALIEKLVELCVQYGQN 60 (101)
T ss_dssp -------------CCCC------HHHHHHHHHHH-TCB-C-CHHHHHHHHHHHHHHTCC
T ss_pred CccchheeeCCchhhcc------HHHHHHHHHHc-CCC-C-CHHHHHHHHHHHHHcCCC
Confidence 45566777777777775 58999999985 331 1 113579999999998874
No 7
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=18.56 E-value=2e+02 Score=25.09 Aligned_cols=40 Identities=13% Similarity=0.199 Sum_probs=21.7
Q ss_pred cHHHHHHHHHHHHhHHH----HHHhhhhhhHHHHHHHHHHHHHH
Q 004159 75 VIKCAEIQSAISEGATS----FLFTEYQYVGVFMVAFAILIFLF 114 (771)
Q Consensus 75 ~~~m~~Ia~~I~eGA~a----fL~~qyk~i~~~~v~~~~~l~~~ 114 (771)
++.+++-|..-+..|.. +..+.||...++.+++.++++++
T Consensus 42 t~~L~~~s~~F~~~A~~l~rkmwwkn~K~~iii~~iv~~il~ii 85 (91)
T 3hd7_A 42 ADALQAGASQFETSAAKLKRKYWWKNLKMMIILGVICAIILIII 85 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444433 44556787777666666555443
No 8
>4av3_A K(+)-stimulated pyrophosphate-energized sodium PU; hydrolase, membrane pyrophosphotase, ION pump; 2.60A {Thermotoga maritima} PDB: 4av6_A
Probab=18.19 E-value=65 Score=38.19 Aligned_cols=140 Identities=22% Similarity=0.264 Sum_probs=87.1
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhhhhhHhhHHHHhcC---------------hhHHHHhhccc---cc-hhHHHHHHH
Q 004159 144 AFSTVSFLLGGITSVVSGFLGMKIATFANARTTLEARKG---------------VGKAFIVAFRS---GA-VMGFLLAAN 204 (771)
Q Consensus 144 ~~~~~~Fl~Ga~~S~laG~iGM~vat~aNvRta~AA~~~---------------~~~al~vafrg---Gs-VmGl~vvgl 204 (771)
+.+.+..++|+..-.+=.-..|+-=.|+--|.-+.-||. +.+..+++-|. .+ .-|++.+
T Consensus 551 P~VlvGlliGgmlpflFsaltm~AVgrAA~~mV~EVRRQFreipGimeg~~kPdy~~cV~I~T~~AlkeMi~p~~l~v-- 628 (735)
T 4av3_A 551 ARVIAGALLGAAITYYFSGYLISAVTKAAMKMVDEIRRQAREIPGLLEGKAKPDYNRCIEITSDNALKQMGYPAFIAI-- 628 (735)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-------------------CHHHHHHHHHHHHHTTHHHHHHHH--
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccCCCCCChHHHHHHHHHHHHHHhHHHHHHHH--
Confidence 467788899998888877777777777766666655543 33444444332 12 2333332
Q ss_pred HHHHHHHHHHHHhhhcCCCcchhhhhHHhhchhhHHHHHHHHHhcccccchhhccccccchhccCCCC-----CCCCCcc
Q 004159 205 GLLVLFIAINLFKLYYGDDWSGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPE-----DDPRNPA 279 (771)
Q Consensus 205 gLl~l~~~~~~~~~~~~~~~~~~~~~l~gfg~GaS~iALFaRvGGGIyTKAADVGADLVGKVEagIPE-----DDPRNPa 279 (771)
+.=.+..+++ + +..+--.+.|.-.-+-+.|+|.--+||-+-.|=.. ||.|--| .|++.-+
T Consensus 629 --~~P~~vg~~~----g--~~~l~g~L~g~~v~G~~~Ai~m~n~GGAWDNAKK~-------iE~G~~g~~gKgS~aHkAa 693 (735)
T 4av3_A 629 --LTPLVTGFLL----G--AEFVGGVLIGTVLSGAMLAILTANSGGAWDNAKKY-------LEAGNLEGYGKGSEPHKAL 693 (735)
T ss_dssp --HHHHHHHHHH----C--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHTSCSSSCCSSSHHHHHH
T ss_pred --HHHHHHHHHh----H--HHHHHHHHHHHHHHHHHHHHHHhcCccHHhhhHHh-------hccCCCCCCCCCChhhcCc
Confidence 1111112222 1 11122345666666778999999999999887754 6876544 5666789
Q ss_pred ccccccccccccccccchhhh
Q 004159 280 VIADNVGDNVGDIAGMGSDLF 300 (771)
Q Consensus 280 vIADnVGDNVGD~AGmgADLF 300 (771)
|+.|.|||=-=|.+|+.-+.-
T Consensus 694 VvGDTVGDPfKDTsGPslN~l 714 (735)
T 4av3_A 694 VIGDTVGDPLKDTVGPSLDIL 714 (735)
T ss_dssp HHHHHHHHHHHHTHHHHHHHH
T ss_pred ccCCCCCCCcccccchhHHHH
Confidence 999999999999998877644
No 9
>3din_C Preprotein translocase subunit SECY; protein translocation, membrane protein, ATPase, ATP-binding membrane, nucleotide-binding, protein transport; HET: ADP; 4.50A {Thermotoga maritima MSB8}
Probab=17.73 E-value=98 Score=34.32 Aligned_cols=88 Identities=18% Similarity=0.298 Sum_probs=53.9
Q ss_pred cCChhHHHHHHhhhhHHHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCChhHHHHHHHHHHHhhhcchhhHH
Q 004159 574 VLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALV 653 (771)
Q Consensus 574 l~~p~vl~GlliG~mlpflFsal~m~aVg~aA~~mV~EVRRQFreipGi~eg~~kPDY~~cV~I~T~~AlkeMi~Pglla 653 (771)
..+|.-..+.++=..+.++||-+- .++.-...|+-|+.|||=--+||+..|++.-|| --++.+|.++-.-+.-++++
T Consensus 298 ~~~~~~~~y~~~y~~lii~Fs~fy-~~i~~np~diA~~lkk~G~~IpGiRpG~~T~~y--L~~vi~rit~~Ga~~L~~ia 374 (431)
T 3din_C 298 LFRAGGFLYLLIYGLLVFFFTYFY-SVVIFDPREISENIRKYGGYIPGLRPGRSTEQY--LHRVLNRVTFIGAVFLVVIA 374 (431)
T ss_dssp CSSTTHHHHHHHHHHHHHHHHHHH-HTCTTHHHHHTTSCCCCBCSSCCCCCTTHHHHH--HHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCcHHHHHHHHHHHHHHHHHH-HHHhcCHHHHHHHHHHCCCcCCCCCCChhHHHH--HHHHHHHHHHHhHHHHHHHH
Confidence 455655556555555666666443 344455555556666665569999999544444 44556666666666677777
Q ss_pred HHhhHHHHHhhh
Q 004159 654 MLTPLIVGIFFG 665 (771)
Q Consensus 654 il~Pi~vG~~~G 665 (771)
++ |.+++..+|
T Consensus 375 vl-p~~~~~~~g 385 (431)
T 3din_C 375 LL-PYLVQGAIK 385 (431)
T ss_dssp HH-HHHHTTTSC
T ss_pred HH-HHHHHHHhC
Confidence 65 777665444
No 10
>3fss_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; 1.43A {Saccharomyces cerevisiae} PDB: 3tw1_A* 3tvv_A* 3gyp_A 3gyo_A 3to1_A
Probab=17.51 E-value=92 Score=32.23 Aligned_cols=32 Identities=28% Similarity=0.592 Sum_probs=25.7
Q ss_pred HHHHHhhccCCCCCCCCCCCChhHHHHHHHHHHH
Q 004159 610 EEVRRQFNTIPGLMEGTAKPDYATCVKISTDASI 643 (771)
Q Consensus 610 ~EVRRQFreipGi~eg~~kPDY~~cV~I~T~~Al 643 (771)
|.+..||.+ .|+++.+.+ ||++|+|-..|-+.
T Consensus 99 ~~~~kq~~~-~g~~~~~~~-~f~~~i~~~~rQ~~ 130 (237)
T 3fss_A 99 ENTLNQFKK-LGLLDSNVT-DFEKCVEYIRKQAI 130 (237)
T ss_dssp HHHHHHHHH-TTSSCTTCC-CTHHHHHHHHHHHH
T ss_pred HHhhhhhhh-cCCCcccch-hHHHHHHHHHHHHh
Confidence 457899998 588888777 99999998865554
Done!