Query 004164
Match_columns 771
No_of_seqs 647 out of 4142
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 16:19:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004164.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004164hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gjy_A Spermidine synthase; AP 99.9 2.1E-25 7.1E-30 239.0 22.5 181 510-733 62-251 (317)
2 3o4f_A Spermidine synthase; am 99.9 1.2E-23 4E-28 222.3 20.2 169 516-731 67-247 (294)
3 3c6k_A Spermine synthase; sper 99.9 1E-20 3.4E-25 205.5 21.6 174 516-729 190-378 (381)
4 1iy9_A Spermidine synthase; ro 99.8 3.8E-20 1.3E-24 195.9 22.5 167 516-730 59-237 (275)
5 2pxx_A Uncharacterized protein 99.8 2.9E-20 9.8E-25 187.5 17.1 190 24-225 3-200 (215)
6 1uir_A Polyamine aminopropyltr 99.8 1.6E-19 5.5E-24 194.8 21.9 184 516-743 61-258 (314)
7 1mjf_A Spermidine synthase; sp 99.8 2.2E-18 7.5E-23 183.0 22.5 165 516-729 59-239 (281)
8 2qfm_A Spermine synthase; sper 99.8 6.2E-18 2.1E-22 183.1 23.1 168 516-728 173-358 (364)
9 2i7c_A Spermidine synthase; tr 99.8 6.8E-18 2.3E-22 179.4 23.0 167 516-729 62-239 (283)
10 2b2c_A Spermidine synthase; be 99.8 1.3E-17 4.5E-22 179.6 22.0 167 516-729 92-269 (314)
11 1inl_A Spermidine synthase; be 99.8 1.1E-17 3.9E-22 178.8 21.2 169 516-730 74-253 (296)
12 2gb4_A Thiopurine S-methyltran 99.8 3.6E-18 1.2E-22 178.5 16.5 144 26-180 31-193 (252)
13 3adn_A Spermidine synthase; am 99.7 3.7E-18 1.3E-22 182.3 13.1 168 516-730 67-246 (294)
14 3bwc_A Spermidine synthase; SA 99.7 4.5E-16 1.5E-20 167.0 23.0 168 516-729 79-258 (304)
15 2o07_A Spermidine synthase; st 99.7 2.2E-16 7.4E-21 169.5 19.7 167 516-729 79-256 (304)
16 2cmg_A Spermidine synthase; tr 99.7 3.1E-16 1E-20 164.7 16.4 155 516-732 56-219 (262)
17 2pt6_A Spermidine synthase; tr 99.7 7E-16 2.4E-20 166.7 19.2 168 516-730 100-278 (321)
18 3kkz_A Uncharacterized protein 99.7 8.3E-17 2.9E-21 168.7 10.9 200 50-266 30-245 (267)
19 1pjz_A Thiopurine S-methyltran 99.7 4.6E-17 1.6E-21 164.3 8.5 107 67-179 21-141 (203)
20 3f4k_A Putative methyltransfer 99.7 1.7E-16 5.7E-21 165.0 10.8 199 50-265 30-244 (257)
21 3v97_A Ribosomal RNA large sub 99.6 1.2E-13 4.1E-18 163.9 32.7 118 541-692 539-660 (703)
22 1xj5_A Spermidine synthase 1; 99.6 3.5E-15 1.2E-19 161.9 18.0 168 515-729 103-283 (334)
23 2xvm_A Tellurite resistance pr 99.6 4.4E-15 1.5E-19 147.6 16.4 132 25-179 5-137 (199)
24 4gek_A TRNA (CMO5U34)-methyltr 99.6 3.9E-15 1.3E-19 156.2 13.4 107 67-180 69-180 (261)
25 3ofk_A Nodulation protein S; N 99.6 4.9E-15 1.7E-19 149.9 13.2 142 27-181 13-157 (216)
26 3sm3_A SAM-dependent methyltra 99.6 5.6E-15 1.9E-19 150.7 13.8 138 28-183 3-146 (235)
27 4hg2_A Methyltransferase type 99.6 4.4E-15 1.5E-19 155.4 12.7 112 52-182 28-139 (257)
28 3lcc_A Putative methyl chlorid 99.6 6.9E-15 2.4E-19 151.0 13.2 141 27-181 32-174 (235)
29 3dlc_A Putative S-adenosyl-L-m 99.6 1E-14 3.4E-19 147.0 13.9 135 28-180 14-150 (219)
30 2ex4_A Adrenal gland protein A 99.6 3.3E-15 1.1E-19 154.1 10.3 108 68-180 79-187 (241)
31 2o57_A Putative sarcosine dime 99.6 1.3E-14 4.6E-19 154.2 14.1 107 67-181 81-190 (297)
32 3g5l_A Putative S-adenosylmeth 99.6 2.2E-14 7.7E-19 148.7 14.7 113 56-180 35-147 (253)
33 2a14_A Indolethylamine N-methy 99.6 4.1E-15 1.4E-19 155.9 9.0 151 24-180 14-199 (263)
34 1vl5_A Unknown conserved prote 99.6 1.7E-14 5.9E-19 150.4 13.7 113 57-180 29-142 (260)
35 3thr_A Glycine N-methyltransfe 99.6 1.2E-14 4.2E-19 154.1 12.7 157 16-184 16-181 (293)
36 3hnr_A Probable methyltransfer 99.6 1.9E-14 6.4E-19 145.8 13.5 104 67-180 44-147 (220)
37 1xtp_A LMAJ004091AAA; SGPP, st 99.6 6.5E-15 2.2E-19 152.5 10.1 107 67-179 92-198 (254)
38 2p7i_A Hypothetical protein; p 99.6 8.3E-15 2.8E-19 150.5 10.8 104 68-183 42-146 (250)
39 3h2b_A SAM-dependent methyltra 99.5 9.3E-15 3.2E-19 146.3 10.3 115 54-182 31-145 (203)
40 3g5t_A Trans-aconitate 3-methy 99.5 1.9E-14 6.5E-19 153.5 13.3 118 52-181 24-152 (299)
41 3l8d_A Methyltransferase; stru 99.5 1.7E-14 6E-19 148.1 12.4 115 52-181 42-156 (242)
42 2kw5_A SLR1183 protein; struct 99.5 9.5E-15 3.2E-19 146.1 9.4 136 30-183 1-136 (202)
43 3ujc_A Phosphoethanolamine N-m 99.5 3.3E-14 1.1E-18 147.9 13.4 117 58-181 45-162 (266)
44 3bus_A REBM, methyltransferase 99.5 4.8E-14 1.6E-18 147.8 13.8 107 67-180 60-168 (273)
45 3dtn_A Putative methyltransfer 99.5 7.7E-14 2.6E-18 142.8 15.0 123 50-181 28-151 (234)
46 3cgg_A SAM-dependent methyltra 99.5 1.7E-13 5.7E-18 135.2 16.7 105 67-181 45-150 (195)
47 1nkv_A Hypothetical protein YJ 99.5 6.8E-14 2.3E-18 145.1 14.5 119 50-179 21-141 (256)
48 3jwg_A HEN1, methyltransferase 99.5 2.1E-13 7.1E-18 138.2 17.6 119 54-180 18-143 (219)
49 3ggd_A SAM-dependent methyltra 99.5 5.2E-14 1.8E-18 145.2 13.3 146 27-182 15-167 (245)
50 3dli_A Methyltransferase; PSI- 99.5 3.2E-14 1.1E-18 146.6 11.5 134 27-183 10-145 (240)
51 1xxl_A YCGJ protein; structura 99.5 8E-14 2.7E-18 143.7 14.0 116 55-181 11-127 (239)
52 3ou2_A SAM-dependent methyltra 99.5 6.8E-14 2.3E-18 141.1 13.0 114 56-181 36-149 (218)
53 2i62_A Nicotinamide N-methyltr 99.5 3E-14 1E-18 148.3 10.2 149 24-180 15-200 (265)
54 2p8j_A S-adenosylmethionine-de 99.5 7.3E-14 2.5E-18 140.2 12.6 110 67-182 22-132 (209)
55 2gs9_A Hypothetical protein TT 99.5 5.5E-14 1.9E-18 141.5 11.7 102 68-183 36-137 (211)
56 3jwh_A HEN1; methyltransferase 99.5 1.2E-13 4E-18 140.0 14.0 118 54-179 18-142 (217)
57 1y8c_A S-adenosylmethionine-de 99.5 1.4E-13 4.7E-18 141.3 14.7 126 49-181 19-145 (246)
58 3e23_A Uncharacterized protein 99.5 1.5E-13 5.3E-18 138.4 14.7 102 67-180 42-143 (211)
59 3g2m_A PCZA361.24; SAM-depende 99.5 3.3E-14 1.1E-18 151.6 10.2 123 51-184 69-196 (299)
60 1ve3_A Hypothetical protein PH 99.5 9.9E-14 3.4E-18 140.9 13.2 110 68-183 38-147 (227)
61 1wzn_A SAM-dependent methyltra 99.5 1.1E-13 3.9E-18 143.2 13.9 136 28-178 9-145 (252)
62 3pfg_A N-methyltransferase; N, 99.5 9.1E-14 3.1E-18 145.1 13.0 134 28-180 19-153 (263)
63 2yqz_A Hypothetical protein TT 99.5 1.5E-13 5.1E-18 142.8 14.4 103 67-177 38-140 (263)
64 3m70_A Tellurite resistance pr 99.5 2.1E-13 7.2E-18 144.2 15.7 105 68-179 120-224 (286)
65 3dh0_A SAM dependent methyltra 99.5 6.8E-14 2.3E-18 141.6 11.1 115 56-180 28-145 (219)
66 3bkw_A MLL3908 protein, S-aden 99.5 1.2E-13 4.2E-18 141.7 13.2 114 55-180 33-146 (243)
67 3ege_A Putative methyltransfer 99.5 7.7E-14 2.6E-18 145.9 11.7 117 50-183 19-135 (261)
68 3i9f_A Putative type 11 methyl 99.5 1.9E-13 6.6E-18 132.7 13.5 100 67-181 16-115 (170)
69 3mgg_A Methyltransferase; NYSG 99.5 1.2E-13 4.2E-18 145.0 12.5 107 67-180 36-144 (276)
70 3ccf_A Cyclopropane-fatty-acyl 99.5 9.6E-14 3.3E-18 146.4 11.6 110 57-182 49-158 (279)
71 4htf_A S-adenosylmethionine-de 99.5 1.6E-13 5.6E-18 145.0 13.0 107 68-182 68-177 (285)
72 2g72_A Phenylethanolamine N-me 99.5 1.7E-13 5.8E-18 145.4 12.7 157 17-178 22-215 (289)
73 2vdw_A Vaccinia virus capping 99.5 1E-13 3.5E-18 148.5 10.4 113 68-184 48-175 (302)
74 1zx0_A Guanidinoacetate N-meth 99.5 9.3E-14 3.2E-18 142.9 9.6 111 67-180 59-172 (236)
75 3mti_A RRNA methylase; SAM-dep 99.4 9E-13 3.1E-17 129.9 15.4 151 67-222 21-183 (185)
76 3vc1_A Geranyl diphosphate 2-C 99.4 3.8E-13 1.3E-17 144.4 13.6 108 66-182 115-225 (312)
77 3gu3_A Methyltransferase; alph 99.4 5E-13 1.7E-17 141.5 14.2 106 67-180 21-128 (284)
78 3bxo_A N,N-dimethyltransferase 99.4 4.9E-13 1.7E-17 136.8 12.9 134 28-180 9-143 (239)
79 3d2l_A SAM-dependent methyltra 99.4 7.9E-13 2.7E-17 135.6 14.5 120 50-181 20-140 (243)
80 2avn_A Ubiquinone/menaquinone 99.4 4.8E-13 1.6E-17 139.6 12.6 114 51-181 42-155 (260)
81 1ri5_A MRNA capping enzyme; me 99.4 3.1E-13 1.1E-17 143.1 11.1 115 67-184 63-180 (298)
82 2p35_A Trans-aconitate 2-methy 99.4 6.9E-13 2.4E-17 137.6 13.4 102 67-180 32-134 (259)
83 3hem_A Cyclopropane-fatty-acyl 99.4 1.2E-12 4E-17 139.7 15.4 113 66-182 70-187 (302)
84 1kpg_A CFA synthase;, cyclopro 99.4 1.4E-12 4.8E-17 137.8 15.7 114 59-181 55-171 (287)
85 3e05_A Precorrin-6Y C5,15-meth 99.4 4.1E-12 1.4E-16 127.4 17.8 120 50-182 25-146 (204)
86 3eey_A Putative rRNA methylase 99.4 3E-12 1E-16 127.4 16.7 156 67-226 21-191 (197)
87 3orh_A Guanidinoacetate N-meth 99.4 2.5E-13 8.6E-18 140.1 8.1 114 54-178 50-170 (236)
88 3iv6_A Putative Zn-dependent a 99.4 6.8E-13 2.3E-17 138.8 11.3 112 53-179 33-149 (261)
89 2fk8_A Methoxy mycolic acid sy 99.4 2.2E-12 7.6E-17 138.6 15.7 115 59-182 81-198 (318)
90 3evz_A Methyltransferase; NYSG 99.4 1.2E-11 4E-16 126.2 20.1 137 67-203 54-205 (230)
91 3fpf_A Mtnas, putative unchara 99.4 4.4E-12 1.5E-16 134.2 17.3 147 44-205 101-251 (298)
92 2aot_A HMT, histamine N-methyl 99.4 4.9E-13 1.7E-17 142.2 9.6 108 67-181 51-175 (292)
93 1vlm_A SAM-dependent methyltra 99.4 1.5E-12 5.1E-17 132.2 12.7 98 68-183 47-144 (219)
94 3e8s_A Putative SAM dependent 99.4 1.4E-12 4.7E-17 131.9 11.9 101 67-181 51-155 (227)
95 3njr_A Precorrin-6Y methylase; 99.4 6.9E-12 2.4E-16 126.4 16.8 117 51-183 41-159 (204)
96 2fyt_A Protein arginine N-meth 99.4 5.1E-13 1.8E-17 145.5 9.1 115 53-175 52-168 (340)
97 1nt2_A Fibrillarin-like PRE-rR 99.4 2.6E-12 8.8E-17 130.2 13.5 115 52-178 42-161 (210)
98 1vbf_A 231AA long hypothetical 99.4 1.6E-12 5.4E-17 132.8 11.6 136 25-180 28-167 (231)
99 3lbf_A Protein-L-isoaspartate 99.4 1.4E-12 4.9E-17 131.2 10.7 114 50-180 62-176 (210)
100 4fsd_A Arsenic methyltransfera 99.4 1.3E-12 4.6E-17 144.5 11.4 107 67-180 82-205 (383)
101 1l3i_A Precorrin-6Y methyltran 99.4 2E-12 7E-17 127.0 11.3 119 50-183 18-139 (192)
102 3g07_A 7SK snRNA methylphospha 99.4 1.2E-12 4.1E-17 139.4 9.9 110 68-178 46-220 (292)
103 3p9n_A Possible methyltransfer 99.4 1.7E-12 5.8E-17 128.7 10.3 108 68-181 44-156 (189)
104 4df3_A Fibrillarin-like rRNA/T 99.3 6.4E-12 2.2E-16 129.0 14.3 125 45-179 54-183 (233)
105 3bgv_A MRNA CAP guanine-N7 met 99.3 3E-12 1E-16 137.4 12.5 113 68-184 34-161 (313)
106 3ocj_A Putative exported prote 99.3 1.4E-12 4.9E-17 139.4 9.9 111 67-182 117-231 (305)
107 3m33_A Uncharacterized protein 99.3 4.7E-12 1.6E-16 129.3 12.9 91 67-175 47-139 (226)
108 2yxd_A Probable cobalt-precorr 99.3 9.1E-12 3.1E-16 121.5 14.3 133 51-202 21-155 (183)
109 3q7e_A Protein arginine N-meth 99.3 1.7E-12 6E-17 141.8 9.9 105 67-176 65-171 (349)
110 3hm2_A Precorrin-6Y C5,15-meth 99.3 1.2E-11 4.1E-16 120.5 14.4 118 51-183 11-132 (178)
111 1fbn_A MJ fibrillarin homologu 99.3 9.7E-12 3.3E-16 127.4 13.7 106 61-177 67-177 (230)
112 3grz_A L11 mtase, ribosomal pr 99.3 1.1E-11 3.8E-16 124.2 13.3 104 67-182 59-163 (205)
113 3cc8_A Putative methyltransfer 99.3 4E-12 1.4E-16 128.8 10.1 109 56-182 24-134 (230)
114 1af7_A Chemotaxis receptor met 99.3 8.4E-12 2.9E-16 131.5 12.6 104 68-176 105-250 (274)
115 3bkx_A SAM-dependent methyltra 99.3 8E-12 2.8E-16 130.9 12.5 108 67-181 42-162 (275)
116 1p91_A Ribosomal RNA large sub 99.3 7.4E-12 2.5E-16 131.0 11.9 99 68-184 85-184 (269)
117 1dus_A MJ0882; hypothetical pr 99.3 1.3E-11 4.3E-16 121.5 12.7 120 52-182 39-161 (194)
118 3htx_A HEN1; HEN1, small RNA m 99.3 9.4E-12 3.2E-16 145.6 13.4 117 55-180 711-836 (950)
119 2frn_A Hypothetical protein PH 99.3 1.7E-11 5.9E-16 129.6 14.4 121 44-181 106-228 (278)
120 2ift_A Putative methylase HI07 99.3 8E-12 2.7E-16 125.5 10.6 106 68-181 53-166 (201)
121 3ckk_A TRNA (guanine-N(7)-)-me 99.3 9.3E-12 3.2E-16 128.4 11.3 115 67-181 45-171 (235)
122 1yzh_A TRNA (guanine-N(7)-)-me 99.3 2.6E-11 8.9E-16 122.6 14.2 113 68-180 41-158 (214)
123 2ipx_A RRNA 2'-O-methyltransfe 99.3 2E-11 7E-16 125.1 13.6 124 46-179 55-183 (233)
124 3q87_B N6 adenine specific DNA 99.3 3.3E-11 1.1E-15 117.7 14.4 120 68-200 23-145 (170)
125 3dmg_A Probable ribosomal RNA 99.3 1.5E-11 5.2E-16 135.7 13.2 111 68-181 233-343 (381)
126 3fzg_A 16S rRNA methylase; met 99.3 1.8E-11 6.2E-16 120.6 12.2 118 48-178 34-152 (200)
127 2fca_A TRNA (guanine-N(7)-)-me 99.3 1.7E-11 5.8E-16 124.3 12.5 113 68-180 38-155 (213)
128 3gdh_A Trimethylguanosine synt 99.3 7.2E-13 2.5E-17 136.4 2.3 142 25-177 30-180 (241)
129 2qe6_A Uncharacterized protein 99.3 3.4E-11 1.2E-15 127.1 15.0 108 68-181 77-199 (274)
130 1xdz_A Methyltransferase GIDB; 99.3 1.8E-11 6.2E-16 126.2 12.3 101 68-179 70-175 (240)
131 2esr_A Methyltransferase; stru 99.3 1E-11 3.5E-16 121.4 9.7 122 52-183 17-143 (177)
132 3dxy_A TRNA (guanine-N(7)-)-me 99.3 8.4E-12 2.9E-16 127.2 9.4 116 68-183 34-155 (218)
133 2yxe_A Protein-L-isoaspartate 99.3 1.1E-11 3.6E-16 125.2 10.0 138 25-180 37-179 (215)
134 3r0q_C Probable protein argini 99.3 1.6E-11 5.6E-16 135.4 12.2 106 67-178 62-169 (376)
135 1g6q_1 HnRNP arginine N-methyl 99.3 2.9E-11 9.9E-16 130.9 13.7 104 68-176 38-143 (328)
136 2pwy_A TRNA (adenine-N(1)-)-me 99.3 8.8E-11 3E-15 121.6 16.9 118 51-183 82-203 (258)
137 2y1w_A Histone-arginine methyl 99.3 1.9E-11 6.4E-16 133.5 12.1 115 53-177 38-154 (348)
138 2zfu_A Nucleomethylin, cerebra 99.2 3.5E-11 1.2E-15 121.4 13.2 129 67-228 66-196 (215)
139 3fpf_A Mtnas, putative unchara 99.2 1.5E-11 5E-16 130.2 10.7 162 540-752 121-287 (298)
140 3uwp_A Histone-lysine N-methyl 99.2 1.7E-11 5.8E-16 134.4 11.3 116 56-182 164-292 (438)
141 2fhp_A Methylase, putative; al 99.2 9.7E-12 3.3E-16 122.2 8.4 125 49-183 27-159 (187)
142 3lpm_A Putative methyltransfer 99.2 1.6E-10 5.6E-15 120.5 18.1 122 56-180 39-178 (259)
143 4e2x_A TCAB9; kijanose, tetron 99.2 3E-12 1E-16 142.9 4.7 116 53-180 95-210 (416)
144 2plw_A Ribosomal RNA methyltra 99.2 7.1E-11 2.4E-15 117.7 14.1 106 67-182 21-158 (201)
145 2r3s_A Uncharacterized protein 99.2 4.4E-11 1.5E-15 129.2 13.6 107 68-181 165-274 (335)
146 1ej0_A FTSJ; methyltransferase 99.2 3.9E-11 1.3E-15 115.9 11.7 107 67-183 21-141 (180)
147 2fpo_A Methylase YHHF; structu 99.2 1.9E-11 6.3E-16 122.9 9.6 120 51-180 39-162 (202)
148 1jg1_A PIMT;, protein-L-isoasp 99.2 2.3E-11 7.9E-16 124.9 10.4 139 23-180 49-191 (235)
149 3id6_C Fibrillarin-like rRNA/T 99.2 7.6E-11 2.6E-15 121.1 14.0 124 46-179 54-182 (232)
150 3g89_A Ribosomal RNA small sub 99.2 4.2E-11 1.4E-15 124.6 12.3 147 67-227 79-233 (249)
151 3tma_A Methyltransferase; thum 99.2 1.6E-10 5.5E-15 126.3 17.0 160 52-222 190-353 (354)
152 3dp7_A SAM-dependent methyltra 99.2 4.5E-11 1.5E-15 131.2 12.7 106 68-180 179-289 (363)
153 1ws6_A Methyltransferase; stru 99.2 1.4E-11 4.7E-16 119.1 7.6 122 51-183 25-152 (171)
154 1g8a_A Fibrillarin-like PRE-rR 99.2 9.9E-11 3.4E-15 119.3 14.2 123 46-178 51-178 (227)
155 4dcm_A Ribosomal RNA large sub 99.2 7.5E-11 2.6E-15 130.0 13.9 123 54-182 211-338 (375)
156 3mq2_A 16S rRNA methyltransfer 99.2 3.5E-11 1.2E-15 121.7 9.9 104 67-178 26-140 (218)
157 3i53_A O-methyltransferase; CO 99.2 7.3E-11 2.5E-15 127.7 12.9 107 67-181 168-277 (332)
158 1yb2_A Hypothetical protein TA 99.2 9.4E-11 3.2E-15 123.5 12.2 102 67-181 109-214 (275)
159 1jsx_A Glucose-inhibited divis 99.2 2.8E-10 9.6E-15 113.9 14.9 101 68-180 65-167 (207)
160 1i9g_A Hypothetical protein RV 99.2 1.1E-10 3.6E-15 122.9 12.3 118 51-183 85-208 (280)
161 2pjd_A Ribosomal RNA small sub 99.2 5.9E-11 2E-15 129.3 10.7 121 53-180 184-305 (343)
162 3ntv_A MW1564 protein; rossman 99.2 8E-11 2.7E-15 120.8 11.1 114 52-178 58-176 (232)
163 2nxc_A L11 mtase, ribosomal pr 99.2 7.3E-11 2.5E-15 123.0 10.7 103 67-181 119-221 (254)
164 1x19_A CRTF-related protein; m 99.2 1.7E-10 5.9E-15 126.1 14.2 107 67-181 189-298 (359)
165 1wy7_A Hypothetical protein PH 99.2 4.4E-10 1.5E-14 112.5 15.7 121 47-177 28-148 (207)
166 3gwz_A MMCR; methyltransferase 99.2 2.3E-10 7.7E-15 125.9 14.7 106 67-180 201-309 (369)
167 2ozv_A Hypothetical protein AT 99.2 4.1E-10 1.4E-14 117.7 16.0 121 57-180 28-172 (260)
168 3sso_A Methyltransferase; macr 99.2 3.4E-11 1.2E-15 131.7 7.9 97 68-180 216-326 (419)
169 3dou_A Ribosomal RNA large sub 99.2 2.6E-10 8.9E-15 113.7 13.7 145 67-225 24-183 (191)
170 3orh_A Guanidinoacetate N-meth 99.1 6.4E-11 2.2E-15 122.0 9.4 109 540-687 59-168 (236)
171 3dr5_A Putative O-methyltransf 99.1 7.8E-11 2.7E-15 120.3 9.7 101 543-688 58-162 (221)
172 2b3t_A Protein methyltransfera 99.1 7.2E-11 2.5E-15 124.4 9.5 121 53-178 98-238 (276)
173 1ne2_A Hypothetical protein TA 99.1 1.6E-10 5.4E-15 115.4 11.5 118 47-178 30-147 (200)
174 3tfw_A Putative O-methyltransf 99.1 7.5E-10 2.6E-14 114.8 17.0 105 541-690 63-171 (248)
175 1dl5_A Protein-L-isoaspartate 99.1 1.4E-10 4.9E-15 124.7 11.9 112 52-179 62-176 (317)
176 4azs_A Methyltransferase WBDD; 99.1 2.7E-11 9.2E-16 140.8 6.6 107 68-180 66-175 (569)
177 1qzz_A RDMB, aclacinomycin-10- 99.1 1.9E-10 6.6E-15 126.2 13.1 105 67-179 181-288 (374)
178 2pbf_A Protein-L-isoaspartate 99.1 1.4E-10 4.8E-15 118.0 11.0 115 52-180 65-195 (227)
179 1i1n_A Protein-L-isoaspartate 99.1 1.7E-10 5.9E-15 117.3 11.7 114 53-180 63-184 (226)
180 4dzr_A Protein-(glutamine-N5) 99.1 2.1E-11 7.3E-16 122.0 4.8 125 53-180 17-166 (215)
181 3mb5_A SAM-dependent methyltra 99.1 1.9E-10 6.4E-15 119.3 12.0 114 52-181 80-197 (255)
182 3b3j_A Histone-arginine methyl 99.1 1.3E-10 4.5E-15 132.0 11.5 103 67-176 157-261 (480)
183 3dr5_A Putative O-methyltransf 99.1 1.4E-10 4.7E-15 118.4 10.5 101 68-178 56-163 (221)
184 3duw_A OMT, O-methyltransferas 99.1 8.6E-10 3E-14 111.8 16.4 107 541-690 58-168 (223)
185 3c3y_A Pfomt, O-methyltransfer 99.1 1.5E-10 5.2E-15 119.3 10.5 108 540-688 69-180 (237)
186 3p2e_A 16S rRNA methylase; met 99.1 9.9E-11 3.4E-15 119.8 9.1 109 68-178 24-139 (225)
187 1sui_A Caffeoyl-COA O-methyltr 99.1 2.3E-10 7.9E-15 118.8 12.0 108 540-688 78-189 (247)
188 2b25_A Hypothetical protein; s 99.1 4.1E-10 1.4E-14 122.1 14.1 120 50-184 90-225 (336)
189 3tfw_A Putative O-methyltransf 99.1 2.1E-10 7.3E-15 119.0 11.2 104 67-180 62-172 (248)
190 1u2z_A Histone-lysine N-methyl 99.1 1.1E-09 3.9E-14 122.0 17.8 116 52-178 229-359 (433)
191 2vdv_E TRNA (guanine-N(7)-)-me 99.1 2.5E-10 8.5E-15 118.1 11.5 108 68-180 49-175 (246)
192 3mcz_A O-methyltransferase; ad 99.1 1.7E-10 5.6E-15 125.8 10.4 106 69-180 180-289 (352)
193 3u81_A Catechol O-methyltransf 99.1 9.8E-11 3.4E-15 119.0 8.0 117 53-180 46-172 (221)
194 4hc4_A Protein arginine N-meth 99.1 2.4E-10 8.1E-15 125.4 11.5 103 68-176 83-187 (376)
195 1tw3_A COMT, carminomycin 4-O- 99.1 3.7E-10 1.2E-14 123.4 12.6 106 67-180 182-290 (360)
196 2ip2_A Probable phenazine-spec 99.1 3.4E-10 1.2E-14 122.4 12.0 103 70-180 169-274 (334)
197 1o9g_A RRNA methyltransferase; 99.1 3.5E-10 1.2E-14 117.2 11.3 113 68-180 51-216 (250)
198 2gpy_A O-methyltransferase; st 99.1 3.1E-10 1.1E-14 116.1 10.7 118 49-179 38-161 (233)
199 3bzb_A Uncharacterized protein 99.1 5.7E-10 1.9E-14 118.0 13.0 105 67-178 78-205 (281)
200 3lec_A NADB-rossmann superfami 99.1 5.7E-10 1.9E-14 114.1 12.4 127 67-204 20-149 (230)
201 2yvl_A TRMI protein, hypotheti 99.1 9.8E-10 3.4E-14 113.0 14.4 111 55-181 81-193 (248)
202 1o54_A SAM-dependent O-methylt 99.1 5.4E-10 1.9E-14 117.6 12.7 110 56-181 103-216 (277)
203 3ntv_A MW1564 protein; rossman 99.1 3.2E-10 1.1E-14 116.3 10.6 101 541-688 71-175 (232)
204 1r18_A Protein-L-isoaspartate( 99.1 3E-10 1E-14 115.9 10.1 115 51-180 68-196 (227)
205 2nyu_A Putative ribosomal RNA 99.1 5.1E-10 1.7E-14 110.9 11.4 107 67-183 21-150 (196)
206 2f8l_A Hypothetical protein LM 99.1 3E-09 1E-13 115.8 18.3 176 49-225 110-307 (344)
207 3hp7_A Hemolysin, putative; st 99.1 2.5E-10 8.4E-15 120.9 9.4 97 67-177 84-184 (291)
208 3tr6_A O-methyltransferase; ce 99.1 2.4E-10 8.2E-15 116.0 9.0 103 68-180 64-176 (225)
209 3adn_A Spermidine synthase; am 99.1 8E-10 2.8E-14 117.7 13.3 109 68-179 83-199 (294)
210 3duw_A OMT, O-methyltransferas 99.1 3.8E-10 1.3E-14 114.5 10.1 104 67-180 57-169 (223)
211 3r3h_A O-methyltransferase, SA 99.1 1.4E-10 4.9E-15 120.0 7.0 107 541-689 60-170 (242)
212 3gnl_A Uncharacterized protein 99.0 9.2E-10 3.1E-14 113.4 12.3 126 67-203 20-148 (244)
213 2bm8_A Cephalosporin hydroxyla 99.0 2.2E-10 7.7E-15 118.0 7.7 112 51-179 67-188 (236)
214 3lst_A CALO1 methyltransferase 99.0 3.1E-10 1.1E-14 123.6 9.2 103 67-180 183-288 (348)
215 3c3p_A Methyltransferase; NP_9 99.0 5.4E-10 1.9E-14 112.4 10.0 100 541-688 56-159 (210)
216 1ixk_A Methyltransferase; open 99.0 8.3E-10 2.8E-14 118.8 12.0 121 57-180 110-248 (315)
217 3c3p_A Methyltransferase; NP_9 99.0 3.8E-10 1.3E-14 113.5 8.7 100 68-178 56-160 (210)
218 3opn_A Putative hemolysin; str 99.0 9E-11 3.1E-15 120.7 4.1 97 67-178 36-137 (232)
219 3p9c_A Caffeic acid O-methyltr 99.0 1.3E-09 4.6E-14 119.5 13.6 101 67-181 200-301 (364)
220 3tr6_A O-methyltransferase; ce 99.0 8.4E-10 2.9E-14 112.0 11.1 108 541-690 64-175 (225)
221 2igt_A SAM dependent methyltra 99.0 8.3E-10 2.8E-14 119.6 11.6 132 46-180 133-274 (332)
222 4dzr_A Protein-(glutamine-N5) 99.0 1.1E-09 3.9E-14 109.4 11.5 160 540-730 29-206 (215)
223 2ld4_A Anamorsin; methyltransf 99.0 2.7E-10 9.3E-15 111.2 6.8 88 66-178 10-101 (176)
224 3reo_A (ISO)eugenol O-methyltr 99.0 1.2E-09 4.2E-14 120.0 12.8 100 67-180 202-302 (368)
225 1nv8_A HEMK protein; class I a 99.0 4.7E-10 1.6E-14 118.9 9.1 122 52-178 110-249 (284)
226 3kr9_A SAM-dependent methyltra 99.0 1.6E-09 5.5E-14 110.5 12.4 126 67-204 14-143 (225)
227 3bwc_A Spermidine synthase; SA 99.0 8.4E-10 2.9E-14 118.1 10.9 109 68-180 95-212 (304)
228 3a27_A TYW2, uncharacterized p 99.0 1.5E-09 5.2E-14 114.2 12.7 103 67-181 118-222 (272)
229 3giw_A Protein of unknown func 99.0 1E-09 3.4E-14 114.9 11.0 111 68-182 78-204 (277)
230 2wa2_A Non-structural protein 99.0 1.9E-10 6.4E-15 121.5 5.4 108 67-180 81-195 (276)
231 3ajd_A Putative methyltransfer 99.0 7.4E-10 2.5E-14 116.7 9.8 121 57-180 75-213 (274)
232 3dxy_A TRNA (guanine-N(7)-)-me 99.0 2.1E-09 7E-14 109.4 12.7 133 541-707 34-166 (218)
233 2avd_A Catechol-O-methyltransf 99.0 1.2E-09 4.2E-14 111.0 10.8 107 540-688 68-178 (229)
234 3r3h_A O-methyltransferase, SA 99.0 1.7E-10 5.8E-15 119.4 4.1 116 52-180 47-172 (242)
235 3cbg_A O-methyltransferase; cy 99.0 4.2E-09 1.4E-13 108.0 14.5 108 541-690 72-183 (232)
236 1fp1_D Isoliquiritigenin 2'-O- 99.0 8.2E-10 2.8E-14 121.5 9.8 100 67-180 208-308 (372)
237 2oxt_A Nucleoside-2'-O-methylt 99.0 2.1E-10 7.1E-15 120.4 4.7 108 67-180 73-187 (265)
238 2hnk_A SAM-dependent O-methylt 99.0 9.5E-10 3.2E-14 113.1 9.4 117 50-179 45-182 (239)
239 1fp2_A Isoflavone O-methyltran 99.0 7E-10 2.4E-14 121.0 8.7 99 68-180 188-290 (352)
240 1sui_A Caffeoyl-COA O-methyltr 99.0 1E-09 3.5E-14 113.9 9.0 101 68-178 79-190 (247)
241 2ozv_A Hypothetical protein AT 99.0 4.2E-09 1.4E-13 110.0 13.4 159 540-729 35-211 (260)
242 3tm4_A TRNA (guanine N2-)-meth 98.9 3.3E-09 1.1E-13 116.8 13.1 126 52-183 205-334 (373)
243 3frh_A 16S rRNA methylase; met 98.9 9.2E-09 3.1E-13 105.0 15.0 102 68-178 105-206 (253)
244 1xj5_A Spermidine synthase 1; 98.9 1.4E-09 4.7E-14 117.9 9.4 108 68-178 120-235 (334)
245 4a6d_A Hydroxyindole O-methylt 98.9 6.5E-09 2.2E-13 113.6 14.8 106 67-180 178-285 (353)
246 2o07_A Spermidine synthase; st 98.9 1.9E-09 6.6E-14 115.3 10.1 109 68-179 95-210 (304)
247 1iy9_A Spermidine synthase; ro 98.9 1.8E-09 6.1E-14 113.9 9.6 110 68-180 75-191 (275)
248 1uir_A Polyamine aminopropyltr 98.9 2.5E-09 8.7E-14 114.9 10.9 111 68-179 77-196 (314)
249 3gjy_A Spermidine synthase; AP 98.9 2.4E-09 8.3E-14 114.5 10.6 108 70-180 91-202 (317)
250 1mjf_A Spermidine synthase; sp 98.9 1.3E-09 4.4E-14 115.3 8.3 107 68-179 75-194 (281)
251 3u81_A Catechol O-methyltransf 98.9 2.2E-09 7.6E-14 108.9 9.8 112 541-692 58-173 (221)
252 1zq9_A Probable dimethyladenos 98.9 3.6E-09 1.2E-13 112.1 11.5 90 51-146 14-105 (285)
253 2i7c_A Spermidine synthase; tr 98.9 2.7E-09 9.1E-14 113.0 10.4 108 68-179 78-193 (283)
254 3cbg_A O-methyltransferase; cy 98.9 2.2E-09 7.4E-14 110.1 9.4 103 68-180 72-184 (232)
255 2b2c_A Spermidine synthase; be 98.9 2.4E-09 8.2E-14 115.0 9.9 107 68-178 108-222 (314)
256 2avd_A Catechol-O-methyltransf 98.9 2.3E-09 8E-14 109.0 9.0 115 52-179 56-180 (229)
257 2b78_A Hypothetical protein SM 98.9 4.1E-09 1.4E-13 116.5 11.6 131 46-181 195-334 (385)
258 3k6r_A Putative transferase PH 98.9 5.1E-09 1.7E-13 110.3 11.7 118 46-180 108-227 (278)
259 4dmg_A Putative uncharacterize 98.9 5E-09 1.7E-13 115.9 12.1 130 46-181 197-329 (393)
260 2gpy_A O-methyltransferase; st 98.9 3.1E-09 1.1E-13 108.6 9.7 104 541-689 54-160 (233)
261 3c3y_A Pfomt, O-methyltransfer 98.9 3.1E-09 1.1E-13 109.4 9.7 102 68-179 70-182 (237)
262 2pt6_A Spermidine synthase; tr 98.9 4.1E-09 1.4E-13 113.6 10.9 109 68-180 116-232 (321)
263 2yxl_A PH0851 protein, 450AA l 98.9 6.9E-09 2.4E-13 117.1 13.2 122 56-180 250-391 (450)
264 1inl_A Spermidine synthase; be 98.9 4.6E-09 1.6E-13 111.9 11.1 111 68-180 90-207 (296)
265 2h00_A Methyltransferase 10 do 98.9 2.1E-09 7E-14 111.5 8.1 126 52-177 47-191 (254)
266 2p41_A Type II methyltransfera 98.9 1.3E-09 4.6E-14 116.5 6.6 108 67-181 81-194 (305)
267 1yzh_A TRNA (guanine-N(7)-)-me 98.9 9.8E-09 3.3E-13 103.6 12.6 132 541-707 41-172 (214)
268 2fca_A TRNA (guanine-N(7)-)-me 98.9 1.3E-08 4.5E-13 102.9 13.4 132 541-707 38-169 (213)
269 1sqg_A SUN protein, FMU protei 98.9 6.4E-09 2.2E-13 116.6 12.2 123 55-180 236-376 (429)
270 2hnk_A SAM-dependent O-methylt 98.9 4.5E-09 1.5E-13 108.0 10.1 117 541-690 60-182 (239)
271 2as0_A Hypothetical protein PH 98.9 3.5E-09 1.2E-13 117.5 9.6 114 68-181 217-338 (396)
272 3e05_A Precorrin-6Y C5,15-meth 98.9 8.8E-09 3E-13 102.9 11.4 117 540-707 39-158 (204)
273 3c0k_A UPF0064 protein YCCW; P 98.9 8E-09 2.7E-13 114.6 12.2 130 45-180 203-341 (396)
274 2cmg_A Spermidine synthase; tr 98.9 4.8E-09 1.6E-13 109.8 9.7 96 68-179 72-172 (262)
275 3v97_A Ribosomal RNA large sub 98.9 4.9E-09 1.7E-13 124.4 11.0 129 46-180 523-659 (703)
276 1dus_A MJ0882; hypothetical pr 98.9 1.2E-08 4.2E-13 99.9 12.1 138 541-727 52-192 (194)
277 3hm2_A Precorrin-6Y C5,15-meth 98.9 1.7E-08 5.7E-13 98.0 12.7 124 540-712 24-148 (178)
278 1zx0_A Guanidinoacetate N-meth 98.8 9.7E-09 3.3E-13 105.2 11.3 108 541-687 60-168 (236)
279 3p9n_A Possible methyltransfer 98.8 1.5E-08 5.3E-13 99.9 12.3 109 541-693 44-157 (189)
280 2yx1_A Hypothetical protein MJ 98.8 1E-08 3.6E-13 111.1 12.0 99 68-182 195-295 (336)
281 2qm3_A Predicted methyltransfe 98.8 8.4E-09 2.9E-13 113.5 11.4 102 68-178 172-277 (373)
282 1zg3_A Isoflavanone 4'-O-methy 98.8 3.6E-09 1.2E-13 115.6 8.2 99 68-180 193-295 (358)
283 3lcv_B Sisomicin-gentamicin re 98.8 8.5E-09 2.9E-13 106.2 10.0 147 47-205 116-273 (281)
284 3lpm_A Putative methyltransfer 98.8 1.5E-08 5.2E-13 105.5 12.0 153 541-728 49-217 (259)
285 3mb5_A SAM-dependent methyltra 98.8 1.9E-08 6.3E-13 104.1 12.3 122 540-714 92-220 (255)
286 2frx_A Hypothetical protein YE 98.8 1.6E-08 5.4E-13 114.7 12.4 113 68-180 117-248 (479)
287 3m6w_A RRNA methylase; rRNA me 98.8 5.6E-09 1.9E-13 117.5 8.3 122 56-180 92-231 (464)
288 4gek_A TRNA (CMO5U34)-methyltr 98.8 4.6E-08 1.6E-12 102.3 14.7 106 540-688 69-177 (261)
289 1xdz_A Methyltransferase GIDB; 98.8 1.7E-08 5.7E-13 103.9 11.0 119 541-706 70-191 (240)
290 2h1r_A Dimethyladenosine trans 98.8 1.7E-08 5.7E-13 107.8 11.2 89 51-145 28-117 (299)
291 3ckk_A TRNA (guanine-N(7)-)-me 98.8 3.3E-08 1.1E-12 101.7 12.8 133 540-706 45-183 (235)
292 2esr_A Methyltransferase; stru 98.8 1.8E-08 6.1E-13 98.1 10.1 108 541-693 31-142 (177)
293 2okc_A Type I restriction enzy 98.8 8.3E-08 2.8E-12 108.1 16.2 175 47-225 153-359 (445)
294 3ajd_A Putative methyltransfer 98.8 5.3E-08 1.8E-12 102.4 13.5 137 541-711 83-233 (274)
295 3evz_A Methyltransferase; NYSG 98.7 4.9E-08 1.7E-12 99.2 12.6 156 540-730 54-221 (230)
296 2vdv_E TRNA (guanine-N(7)-)-me 98.7 4.7E-08 1.6E-12 100.9 12.5 129 541-706 49-188 (246)
297 1wxx_A TT1595, hypothetical pr 98.7 1.3E-08 4.4E-13 112.4 8.6 112 68-180 209-327 (382)
298 3njr_A Precorrin-6Y methylase; 98.7 8.6E-08 2.9E-12 96.2 13.9 115 540-708 54-171 (204)
299 3m4x_A NOL1/NOP2/SUN family pr 98.7 1.6E-08 5.3E-13 113.8 9.1 122 56-180 96-236 (456)
300 2bm8_A Cephalosporin hydroxyla 98.7 8.2E-09 2.8E-13 106.3 6.3 99 542-689 82-187 (236)
301 2qy6_A UPF0209 protein YFCK; s 98.7 2.1E-08 7.3E-13 104.5 9.4 149 540-730 59-248 (257)
302 3eey_A Putative rRNA methylase 98.7 2.2E-08 7.6E-13 99.2 9.1 118 541-692 22-142 (197)
303 3gru_A Dimethyladenosine trans 98.7 2.7E-08 9.3E-13 105.7 10.3 91 50-145 35-125 (295)
304 2igt_A SAM dependent methyltra 98.7 7.9E-08 2.7E-12 104.0 14.0 133 540-709 152-292 (332)
305 3m6w_A RRNA methylase; rRNA me 98.7 1E-07 3.5E-12 107.3 15.3 133 540-710 100-250 (464)
306 2xyq_A Putative 2'-O-methyl tr 98.7 6.3E-08 2.1E-12 102.6 12.6 102 67-183 62-176 (290)
307 3g89_A Ribosomal RNA small sub 98.7 4.1E-08 1.4E-12 101.9 10.5 119 541-706 80-201 (249)
308 1l3i_A Precorrin-6Y methyltran 98.7 1.4E-07 4.7E-12 92.2 13.8 119 540-708 32-152 (192)
309 1uwv_A 23S rRNA (uracil-5-)-me 98.7 2.5E-07 8.5E-12 103.8 17.3 131 54-200 275-410 (433)
310 3mti_A RRNA methylase; SAM-dep 98.7 1.7E-08 5.9E-13 98.9 7.0 113 541-692 22-138 (185)
311 2b3t_A Protein methyltransfera 98.7 8.2E-08 2.8E-12 100.9 12.4 147 541-727 109-274 (276)
312 1ws6_A Methyltransferase; stru 98.7 3.1E-08 1.1E-12 95.3 8.4 109 541-693 41-151 (171)
313 2ih2_A Modification methylase 98.7 7.1E-08 2.4E-12 107.3 12.5 123 46-180 20-166 (421)
314 3dlc_A Putative S-adenosyl-L-m 98.7 8.7E-08 3E-12 95.8 11.7 106 542-692 44-151 (219)
315 1jsx_A Glucose-inhibited divis 98.7 4.9E-08 1.7E-12 97.4 9.8 104 542-693 66-169 (207)
316 3dtn_A Putative methyltransfer 98.7 7.7E-08 2.6E-12 97.9 11.2 106 540-692 43-151 (234)
317 2jjq_A Uncharacterized RNA met 98.7 1.1E-07 3.6E-12 106.4 13.3 99 67-178 289-387 (425)
318 4dcm_A Ribosomal RNA large sub 98.7 8.9E-08 3.1E-12 105.4 12.4 143 542-729 223-368 (375)
319 1fbn_A MJ fibrillarin homologu 98.7 1.7E-07 5.7E-12 95.6 13.7 144 541-728 74-227 (230)
320 2fhp_A Methylase, putative; al 98.7 8.1E-08 2.8E-12 93.9 10.8 111 541-692 44-157 (187)
321 2pwy_A TRNA (adenine-N(1)-)-me 98.7 9.7E-08 3.3E-12 98.6 11.8 120 540-709 95-217 (258)
322 4df3_A Fibrillarin-like rRNA/T 98.7 2.9E-07 9.8E-12 94.3 14.9 144 540-727 76-230 (233)
323 1yb2_A Hypothetical protein TA 98.6 4.1E-08 1.4E-12 103.2 8.8 119 540-709 109-230 (275)
324 1g8a_A Fibrillarin-like PRE-rR 98.6 1.3E-07 4.4E-12 96.0 11.9 143 541-727 73-225 (227)
325 1yub_A Ermam, rRNA methyltrans 98.6 5.9E-10 2E-14 115.4 -5.7 116 51-178 15-145 (245)
326 2p35_A Trans-aconitate 2-methy 98.6 8.1E-08 2.8E-12 99.1 10.3 104 540-692 32-135 (259)
327 2ift_A Putative methylase HI07 98.6 3.9E-08 1.3E-12 98.4 7.2 109 542-693 54-167 (201)
328 3jwh_A HEN1; methyltransferase 98.6 1.1E-07 3.8E-12 95.7 10.6 105 541-689 29-141 (217)
329 1ixk_A Methyltransferase; open 98.6 1.5E-07 5E-12 101.2 12.1 132 540-709 117-266 (315)
330 3hem_A Cyclopropane-fatty-acyl 98.6 1.1E-07 3.6E-12 101.2 10.7 112 540-694 71-188 (302)
331 3m4x_A NOL1/NOP2/SUN family pr 98.6 1.7E-07 5.8E-12 105.4 12.5 133 540-709 104-254 (456)
332 3dli_A Methyltransferase; PSI- 98.6 1.8E-07 6.1E-12 95.8 11.7 105 540-693 40-144 (240)
333 2b25_A Hypothetical protein; s 98.6 1E-07 3.4E-12 103.2 10.3 120 540-707 104-235 (336)
334 3tqs_A Ribosomal RNA small sub 98.6 2.8E-07 9.7E-12 95.9 13.2 85 51-141 15-103 (255)
335 2fpo_A Methylase YHHF; structu 98.6 7.2E-08 2.5E-12 96.5 8.5 106 542-691 55-162 (202)
336 3f4k_A Putative methyltransfer 98.6 1.7E-07 5.9E-12 96.6 11.6 104 540-690 45-151 (257)
337 2gb4_A Thiopurine S-methyltran 98.6 8.3E-08 2.8E-12 99.8 9.1 106 541-688 68-190 (252)
338 3ocj_A Putative exported prote 98.6 1.7E-07 5.8E-12 99.9 11.6 108 540-692 117-230 (305)
339 3kkz_A Uncharacterized protein 98.6 1.3E-07 4.4E-12 98.5 10.3 104 540-690 45-151 (267)
340 4hg2_A Methyltransferase type 98.6 1.2E-07 4E-12 99.0 9.9 101 540-692 38-138 (257)
341 1o54_A SAM-dependent O-methylt 98.6 1.8E-07 6.1E-12 98.3 11.4 117 540-709 111-232 (277)
342 3ofk_A Nodulation protein S; N 98.6 3.8E-07 1.3E-11 91.5 13.4 128 540-716 50-188 (216)
343 1pjz_A Thiopurine S-methyltran 98.6 7.9E-08 2.7E-12 96.3 8.2 104 541-686 22-137 (203)
344 3dh0_A SAM dependent methyltra 98.6 1.4E-07 4.8E-12 94.8 10.1 147 540-730 36-194 (219)
345 3h2b_A SAM-dependent methyltra 98.6 5.5E-07 1.9E-11 89.4 14.2 140 542-729 42-195 (203)
346 3grz_A L11 mtase, ribosomal pr 98.6 1.5E-07 5E-12 94.0 9.9 121 540-711 59-180 (205)
347 3jwg_A HEN1, methyltransferase 98.6 1E-07 3.4E-12 96.1 8.8 106 540-689 28-141 (219)
348 3g07_A 7SK snRNA methylphospha 98.6 1.5E-07 5.3E-12 99.7 10.5 45 541-585 46-90 (292)
349 1nt2_A Fibrillarin-like PRE-rR 98.6 4.2E-07 1.4E-11 91.7 13.2 140 540-727 56-208 (210)
350 3mgg_A Methyltransferase; NYSG 98.6 9E-08 3.1E-12 100.0 8.4 107 540-689 36-142 (276)
351 2qm3_A Predicted methyltransfe 98.6 3E-07 1E-11 101.1 12.9 105 541-691 172-280 (373)
352 1qam_A ERMC' methyltransferase 98.6 6.6E-07 2.3E-11 92.4 14.7 84 52-141 17-101 (244)
353 3g5l_A Putative S-adenosylmeth 98.6 2E-07 6.7E-12 96.1 10.7 103 541-690 44-146 (253)
354 2yvl_A TRMI protein, hypotheti 98.6 2E-07 6.8E-12 95.6 10.6 117 541-711 91-210 (248)
355 2yxd_A Probable cobalt-precorr 98.5 1.1E-06 3.8E-11 85.1 15.2 114 541-708 35-148 (183)
356 3ou2_A SAM-dependent methyltra 98.5 2.1E-07 7.1E-12 93.2 10.2 104 540-694 45-151 (218)
357 3cgg_A SAM-dependent methyltra 98.5 1.2E-06 4E-11 85.7 15.3 123 540-709 45-168 (195)
358 2nxc_A L11 mtase, ribosomal pr 98.5 2.1E-07 7.3E-12 96.6 10.3 121 541-713 120-241 (254)
359 1ej0_A FTSJ; methyltransferase 98.5 4E-07 1.4E-11 87.4 11.5 143 540-728 21-177 (180)
360 3lbf_A Protein-L-isoaspartate 98.5 2.1E-07 7.1E-12 93.1 9.8 101 540-691 76-176 (210)
361 4htf_A S-adenosylmethionine-de 98.5 2E-07 6.7E-12 98.1 10.0 110 541-694 68-178 (285)
362 3bt7_A TRNA (uracil-5-)-methyl 98.5 3.6E-07 1.2E-11 100.3 12.4 114 55-186 204-334 (369)
363 3a27_A TYW2, uncharacterized p 98.5 1.4E-07 4.7E-12 99.2 8.7 121 541-709 119-242 (272)
364 2p7i_A Hypothetical protein; p 98.5 1.8E-07 6E-12 95.5 9.3 103 541-693 42-145 (250)
365 1i9g_A Hypothetical protein RV 98.5 5.2E-07 1.8E-11 94.5 13.0 117 540-706 98-218 (280)
366 3hnr_A Probable methyltransfer 98.5 1E-06 3.5E-11 88.5 14.4 99 541-690 45-146 (220)
367 3cvo_A Methyltransferase-like 98.5 4.2E-07 1.4E-11 90.9 11.2 119 541-692 30-158 (202)
368 1vl5_A Unknown conserved prote 98.5 2.9E-07 9.8E-12 95.4 10.5 104 540-688 36-139 (260)
369 2frn_A Hypothetical protein PH 98.5 1.7E-07 5.7E-12 98.8 8.8 119 541-708 125-248 (278)
370 2ex4_A Adrenal gland protein A 98.5 1.8E-07 6E-12 95.9 8.6 107 541-689 79-185 (241)
371 3kr9_A SAM-dependent methyltra 98.5 2E-07 6.7E-12 95.0 8.7 139 541-730 15-159 (225)
372 1nkv_A Hypothetical protein YJ 98.5 2.8E-07 9.5E-12 95.0 10.1 103 540-689 35-140 (256)
373 2pxx_A Uncharacterized protein 98.5 1.7E-07 5.7E-12 93.6 8.1 113 540-692 41-162 (215)
374 3k0b_A Predicted N6-adenine-sp 98.5 3.3E-07 1.1E-11 101.4 11.0 122 52-180 188-352 (393)
375 3fut_A Dimethyladenosine trans 98.5 2.6E-07 9.1E-12 96.9 9.7 88 51-145 33-121 (271)
376 3gwz_A MMCR; methyltransferase 98.5 2.6E-06 8.7E-11 93.4 18.0 103 540-689 201-307 (369)
377 3ldg_A Putative uncharacterize 98.5 5.6E-07 1.9E-11 99.2 12.6 122 52-180 181-345 (384)
378 3i9f_A Putative type 11 methyl 98.5 5.6E-07 1.9E-11 86.7 11.2 136 540-730 16-161 (170)
379 3ujc_A Phosphoethanolamine N-m 98.5 2.7E-07 9.4E-12 95.3 9.6 109 540-692 54-162 (266)
380 2qfm_A Spermine synthase; sper 98.5 2.4E-07 8.1E-12 100.4 9.1 113 68-180 188-316 (364)
381 3ldu_A Putative methylase; str 98.5 3E-07 1E-11 101.5 10.1 122 52-180 182-346 (385)
382 3e8s_A Putative SAM dependent 98.5 9.3E-07 3.2E-11 88.7 13.0 105 540-692 51-155 (227)
383 1ve3_A Hypothetical protein PH 98.5 2.7E-07 9.1E-12 93.1 8.9 107 541-691 38-144 (227)
384 2frx_A Hypothetical protein YE 98.5 5.2E-07 1.8E-11 102.3 12.1 132 541-709 117-266 (479)
385 3evf_A RNA-directed RNA polyme 98.5 2.1E-07 7.2E-12 96.5 8.0 156 57-218 63-223 (277)
386 3l8d_A Methyltransferase; stru 98.5 4.6E-07 1.6E-11 92.4 10.5 105 540-692 52-156 (242)
387 1nv8_A HEMK protein; class I a 98.5 7.3E-07 2.5E-11 94.3 12.3 142 542-728 124-281 (284)
388 3id6_C Fibrillarin-like rRNA/T 98.5 9.3E-07 3.2E-11 90.6 12.7 141 540-728 75-230 (232)
389 2b9e_A NOL1/NOP2/SUN domain fa 98.5 1E-06 3.5E-11 94.3 13.3 120 57-180 94-236 (309)
390 2b78_A Hypothetical protein SM 98.5 6E-07 2.1E-11 99.1 11.9 135 542-710 213-351 (385)
391 3bus_A REBM, methyltransferase 98.5 1.4E-06 4.7E-11 90.7 13.9 106 540-691 60-168 (273)
392 3lec_A NADB-rossmann superfami 98.5 3.1E-07 1.1E-11 93.8 8.6 139 541-730 21-165 (230)
393 2qe6_A Uncharacterized protein 98.5 3.4E-06 1.2E-10 88.7 16.9 119 541-693 77-200 (274)
394 3ftd_A Dimethyladenosine trans 98.4 5.8E-07 2E-11 93.2 10.8 76 51-132 17-92 (249)
395 3ccf_A Cyclopropane-fatty-acyl 98.4 7.3E-07 2.5E-11 93.5 11.7 103 540-693 56-158 (279)
396 3bxo_A N,N-dimethyltransferase 98.4 5.3E-07 1.8E-11 91.6 10.3 106 540-692 39-144 (239)
397 3g5t_A Trans-aconitate 3-methy 98.4 2.8E-07 9.4E-12 97.8 8.5 110 540-687 35-147 (299)
398 2pbf_A Protein-L-isoaspartate 98.4 1.9E-07 6.5E-12 94.7 6.6 106 541-691 80-195 (227)
399 2fk8_A Methoxy mycolic acid sy 98.4 5.5E-07 1.9E-11 96.2 10.6 110 540-694 89-199 (318)
400 4dmg_A Putative uncharacterize 98.4 1.2E-06 4.1E-11 96.8 13.6 108 542-693 215-330 (393)
401 1wxx_A TT1595, hypothetical pr 98.4 1.2E-06 4E-11 96.6 13.5 115 542-693 210-329 (382)
402 3pfg_A N-methyltransferase; N, 98.4 7.9E-07 2.7E-11 92.2 11.4 99 540-689 49-151 (263)
403 3lcc_A Putative methyl chlorid 98.4 3E-07 1E-11 93.7 8.1 107 542-692 67-174 (235)
404 3e23_A Uncharacterized protein 98.4 9.3E-07 3.2E-11 88.4 11.5 120 541-713 43-179 (211)
405 3gu3_A Methyltransferase; alph 98.4 4.6E-07 1.6E-11 95.4 9.6 107 540-691 21-128 (284)
406 2yxl_A PH0851 protein, 450AA l 98.4 5.9E-07 2E-11 101.2 11.1 133 541-709 259-409 (450)
407 3dou_A Ribosomal RNA large sub 98.4 1.5E-06 5.3E-11 86.2 12.8 146 541-730 25-182 (191)
408 3ggd_A SAM-dependent methyltra 98.4 1E-06 3.5E-11 90.2 11.8 112 540-692 55-166 (245)
409 1xxl_A YCGJ protein; structura 98.4 5.8E-07 2E-11 92.0 9.8 105 540-689 20-124 (239)
410 2as0_A Hypothetical protein PH 98.4 1.2E-06 4.2E-11 96.9 12.9 117 541-693 217-339 (396)
411 2yqz_A Hypothetical protein TT 98.4 5.9E-07 2E-11 92.7 9.7 104 540-689 38-141 (263)
412 3i53_A O-methyltransferase; CO 98.4 1.3E-06 4.6E-11 94.0 12.7 102 541-689 169-274 (332)
413 1kpg_A CFA synthase;, cyclopro 98.4 1E-06 3.5E-11 92.6 11.5 109 540-693 63-172 (287)
414 1xtp_A LMAJ004091AAA; SGPP, st 98.4 8.8E-07 3E-11 91.0 10.7 106 540-689 92-197 (254)
415 3g2m_A PCZA361.24; SAM-depende 98.4 4.1E-07 1.4E-11 96.4 8.4 106 541-693 82-194 (299)
416 3bkw_A MLL3908 protein, S-aden 98.4 1E-06 3.5E-11 89.7 10.8 103 541-690 43-145 (243)
417 2dul_A N(2),N(2)-dimethylguano 98.4 7.1E-07 2.4E-11 98.2 10.1 102 542-689 48-164 (378)
418 3sm3_A SAM-dependent methyltra 98.4 1.2E-06 4.2E-11 88.5 11.2 108 540-693 29-145 (235)
419 3q87_B N6 adenine specific DNA 98.4 1.9E-06 6.5E-11 83.6 11.9 137 541-730 23-163 (170)
420 1sqg_A SUN protein, FMU protei 98.4 1.1E-06 3.9E-11 98.3 11.8 132 541-709 246-394 (429)
421 2plw_A Ribosomal RNA methyltra 98.4 2.1E-06 7.3E-11 85.0 12.4 163 541-728 22-195 (201)
422 1i1n_A Protein-L-isoaspartate 98.4 3.4E-07 1.2E-11 92.8 6.6 103 541-692 77-185 (226)
423 3vc1_A Geranyl diphosphate 2-C 98.4 7.5E-07 2.6E-11 95.1 9.6 106 540-692 116-224 (312)
424 2yxe_A Protein-L-isoaspartate 98.4 6.7E-07 2.3E-11 89.7 8.6 104 540-692 76-180 (215)
425 2gs9_A Hypothetical protein TT 98.4 5.9E-07 2E-11 89.7 8.2 103 541-695 36-138 (211)
426 2ipx_A RRNA 2'-O-methyltransfe 98.4 5.7E-07 2E-11 91.7 8.2 107 541-691 77-184 (233)
427 4hc4_A Protein arginine N-meth 98.4 6.4E-07 2.2E-11 98.2 9.0 101 541-686 83-186 (376)
428 3c0k_A UPF0064 protein YCCW; P 98.4 1.9E-06 6.4E-11 95.5 12.9 121 541-693 220-343 (396)
429 2xvm_A Tellurite resistance pr 98.4 5.3E-07 1.8E-11 88.8 7.5 104 541-688 32-135 (199)
430 2pjd_A Ribosomal RNA small sub 98.4 9.5E-07 3.2E-11 95.9 10.1 141 542-729 197-337 (343)
431 2fyt_A Protein arginine N-meth 98.4 1.1E-06 3.6E-11 95.5 10.4 103 540-686 63-168 (340)
432 3q7e_A Protein arginine N-meth 98.4 1.1E-06 3.7E-11 95.7 10.4 106 541-688 66-172 (349)
433 3gnl_A Uncharacterized protein 98.4 6.8E-07 2.3E-11 92.0 8.3 139 541-730 21-165 (244)
434 3thr_A Glycine N-methyltransfe 98.3 1.2E-06 4.2E-11 92.2 10.6 114 541-691 57-177 (293)
435 3dmg_A Probable ribosomal RNA 98.3 1.1E-06 3.8E-11 96.7 10.6 142 541-730 233-374 (381)
436 2o57_A Putative sarcosine dime 98.3 9.6E-07 3.3E-11 93.3 9.3 105 540-690 81-188 (297)
437 1r18_A Protein-L-isoaspartate( 98.3 5.8E-07 2E-11 91.3 7.3 102 541-691 84-196 (227)
438 4fsd_A Arsenic methyltransfera 98.3 6.9E-07 2.3E-11 98.5 8.3 114 540-690 82-204 (383)
439 2y1w_A Histone-arginine methyl 98.3 9.2E-07 3.1E-11 96.2 9.2 103 541-689 50-155 (348)
440 1dl5_A Protein-L-isoaspartate 98.3 9.9E-07 3.4E-11 94.6 9.0 103 540-691 74-177 (317)
441 3m33_A Uncharacterized protein 98.3 3.6E-07 1.2E-11 92.8 5.3 91 541-686 48-139 (226)
442 3m70_A Tellurite resistance pr 98.3 1E-06 3.5E-11 92.6 8.9 104 541-689 120-223 (286)
443 1g6q_1 HnRNP arginine N-methyl 98.3 2E-06 6.8E-11 92.8 11.3 102 541-686 38-142 (328)
444 3uzu_A Ribosomal RNA small sub 98.3 1.1E-06 3.8E-11 92.6 8.9 75 51-132 28-106 (279)
445 2r3s_A Uncharacterized protein 98.3 5.2E-06 1.8E-10 89.2 14.4 102 540-689 164-271 (335)
446 1o9g_A RRNA methyltransferase; 98.3 2.8E-07 9.4E-12 95.2 4.1 46 541-586 51-98 (250)
447 3r0q_C Probable protein argini 98.3 1.6E-06 5.6E-11 95.3 10.5 105 540-687 62-167 (376)
448 3axs_A Probable N(2),N(2)-dime 98.3 1.3E-06 4.6E-11 96.2 9.7 103 541-689 52-158 (392)
449 2kw5_A SLR1183 protein; struct 98.3 9.9E-07 3.4E-11 87.5 7.8 103 544-692 32-134 (202)
450 1jg1_A PIMT;, protein-L-isoasp 98.3 1.2E-06 4.1E-11 89.5 8.6 103 540-692 90-192 (235)
451 3mq2_A 16S rRNA methyltransfer 98.3 8.1E-07 2.8E-11 89.4 7.2 109 540-689 26-140 (218)
452 2nyu_A Putative ribosomal RNA 98.3 3E-06 1E-10 83.4 11.2 128 541-715 22-169 (196)
453 3gcz_A Polyprotein; flavivirus 98.3 6.4E-07 2.2E-11 93.0 6.3 158 57-219 79-241 (282)
454 2aot_A HMT, histamine N-methyl 98.3 2.2E-06 7.4E-11 90.6 10.7 115 541-693 52-176 (292)
455 1wzn_A SAM-dependent methyltra 98.3 1.1E-06 3.6E-11 90.5 8.0 107 541-691 41-147 (252)
456 1vbf_A 231AA long hypothetical 98.3 3E-06 1E-10 86.0 11.1 100 540-692 69-168 (231)
457 1x19_A CRTF-related protein; m 98.3 7.8E-06 2.7E-10 89.0 15.2 100 540-688 189-294 (359)
458 3mcz_A O-methyltransferase; ad 98.3 2.1E-06 7.1E-11 93.2 10.6 104 542-689 180-287 (352)
459 2dul_A N(2),N(2)-dimethylguano 98.3 1.1E-06 3.6E-11 96.8 8.2 100 68-178 47-164 (378)
460 1m6y_A S-adenosyl-methyltransf 98.3 1E-06 3.5E-11 93.9 7.8 88 51-141 12-105 (301)
461 1qzz_A RDMB, aclacinomycin-10- 98.3 1.9E-06 6.5E-11 94.2 10.1 102 540-690 181-288 (374)
462 1p91_A Ribosomal RNA large sub 98.3 9.1E-07 3.1E-11 92.0 7.0 97 541-692 85-181 (269)
463 2ip2_A Probable phenazine-spec 98.3 2.1E-06 7.3E-11 92.4 10.1 100 543-689 169-272 (334)
464 3d2l_A SAM-dependent methyltra 98.3 9.1E-07 3.1E-11 90.1 6.8 107 541-691 33-139 (243)
465 2p8j_A S-adenosylmethionine-de 98.2 1.7E-06 5.8E-11 86.0 8.4 110 540-693 22-132 (209)
466 2ar0_A M.ecoki, type I restric 98.2 7.6E-06 2.6E-10 94.2 14.9 176 47-225 151-364 (541)
467 2yx1_A Hypothetical protein MJ 98.2 1.5E-06 5.2E-11 94.0 8.6 112 541-708 195-307 (336)
468 1ri5_A MRNA capping enzyme; me 98.2 2.6E-06 8.8E-11 89.5 10.1 113 540-691 63-176 (298)
469 3dp7_A SAM-dependent methyltra 98.2 1.3E-06 4.5E-11 95.5 7.9 107 541-688 179-286 (363)
470 4a6d_A Hydroxyindole O-methylt 98.2 4.9E-06 1.7E-10 90.6 12.4 101 541-688 179-282 (353)
471 3khk_A Type I restriction-modi 98.2 1.5E-05 5.2E-10 91.6 17.0 179 42-225 222-448 (544)
472 2vdw_A Vaccinia virus capping 98.2 1.3E-06 4.3E-11 93.3 7.3 115 541-691 48-171 (302)
473 3cc8_A Putative methyltransfer 98.2 1.3E-06 4.5E-11 87.8 7.1 102 541-692 32-133 (230)
474 1u2z_A Histone-lysine N-methyl 98.2 2.9E-06 9.9E-11 94.6 10.4 105 540-688 241-358 (433)
475 3k6r_A Putative transferase PH 98.2 6.1E-07 2.1E-11 94.4 4.3 100 540-688 124-224 (278)
476 3fzg_A 16S rRNA methylase; met 98.2 8.3E-07 2.8E-11 87.5 4.8 99 540-686 48-149 (200)
477 1y8c_A S-adenosylmethionine-de 98.2 9.8E-07 3.4E-11 89.8 5.7 108 541-691 37-144 (246)
478 1tw3_A COMT, carminomycin 4-O- 98.2 3.5E-06 1.2E-10 91.6 10.4 103 540-689 182-288 (360)
479 3ll7_A Putative methyltransfer 98.2 1.9E-06 6.3E-11 95.4 7.8 73 68-141 93-170 (410)
480 3uwp_A Histone-lysine N-methyl 98.2 4.5E-06 1.5E-10 91.7 10.8 106 540-688 172-287 (438)
481 1wy7_A Hypothetical protein PH 98.2 1.7E-05 5.9E-10 78.8 14.3 117 541-707 49-165 (207)
482 3gdh_A Trimethylguanosine synt 98.2 3.4E-07 1.2E-11 93.7 1.7 102 541-688 78-180 (241)
483 3p2e_A 16S rRNA methylase; met 98.2 1.9E-06 6.6E-11 87.8 7.1 110 541-687 24-137 (225)
484 3ege_A Putative methyltransfer 98.2 1.7E-06 6E-11 89.7 6.9 100 540-691 33-132 (261)
485 3sso_A Methyltransferase; macr 98.2 9.2E-07 3.2E-11 96.8 4.9 100 540-688 215-323 (419)
486 1qyr_A KSGA, high level kasuga 98.2 1.5E-06 5.2E-11 90.2 6.4 86 51-143 7-99 (252)
487 3tma_A Methyltransferase; thum 98.2 3.9E-06 1.3E-10 91.3 9.9 108 541-689 203-317 (354)
488 3vyw_A MNMC2; tRNA wobble urid 98.2 4.5E-05 1.5E-09 80.7 17.4 148 539-731 94-262 (308)
489 3axs_A Probable N(2),N(2)-dime 98.2 2.6E-06 8.8E-11 93.9 8.1 100 68-178 52-158 (392)
490 2avn_A Ubiquinone/menaquinone 98.1 4.3E-06 1.5E-10 86.6 8.9 103 541-693 54-156 (260)
491 3lkd_A Type I restriction-modi 98.1 6E-05 2.1E-09 86.5 19.2 182 43-224 195-409 (542)
492 1ne2_A Hypothetical protein TA 98.1 2.6E-05 8.9E-10 77.2 14.0 95 541-687 51-145 (200)
493 3bgv_A MRNA CAP guanine-N7 met 98.1 1.8E-06 6.2E-11 92.1 5.7 117 541-692 34-158 (313)
494 4gqb_A Protein arginine N-meth 98.1 5E-06 1.7E-10 96.5 9.6 100 69-175 358-464 (637)
495 3bkx_A SAM-dependent methyltra 98.1 4.3E-06 1.5E-10 87.0 8.3 113 540-692 42-162 (275)
496 2r6z_A UPF0341 protein in RSP 98.1 1.1E-06 3.7E-11 91.7 3.6 79 67-146 82-173 (258)
497 2h00_A Methyltransferase 10 do 98.1 1.2E-06 4.1E-11 90.4 3.7 62 541-602 65-127 (254)
498 3giw_A Protein of unknown func 98.1 2.1E-05 7E-10 82.3 12.9 119 541-693 78-204 (277)
499 3bzb_A Uncharacterized protein 98.1 1.6E-05 5.5E-10 83.6 12.3 124 541-707 79-226 (281)
500 2p41_A Type II methyltransfera 98.1 3.2E-06 1.1E-10 90.2 6.9 126 541-715 82-217 (305)
No 1
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.94 E-value=2.1e-25 Score=239.04 Aligned_cols=181 Identities=20% Similarity=0.291 Sum_probs=151.4
Q ss_pred cCCccchhHHHHHHHHhhhh--hhhhhhhhccCCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC
Q 004164 510 YHGYLASSYHMGIISGFTLI--SSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF 587 (771)
Q Consensus 510 d~~~L~~~Y~~~m~~~l~l~--~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~ 587 (771)
|+.++.+.||+.|++.+.++ .+ ..+++.+||+||+|+|.++++|.+++|..+|++|||||.|+++|+++|++
T Consensus 62 dP~~le~~Y~e~m~~~~~~l~~~~------p~p~~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~ 135 (317)
T 3gjy_A 62 QPQALEFEYMRWIATGARAFIDAH------QDASKLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDI 135 (317)
T ss_dssp CTTCCCSHHHHHHHHHHHHHHHHH------SCGGGCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCC
T ss_pred CCcchhhHHHHHHHHHHHhhcccC------CCCCCCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccc
Confidence 46778999999999876642 12 01223499999999999999999988999999999999999999999998
Q ss_pred CCCCCeeEEEcchHHHHHhhccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcc
Q 004164 588 TQDKSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV 667 (771)
Q Consensus 588 ~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~ 667 (771)
..++|++++++||++|+.... ..+||+||+|++.... ++..++
T Consensus 136 ~~~~rv~v~~~Da~~~l~~~~-------------------------------~~~fDvIi~D~~~~~~------~~~~L~ 178 (317)
T 3gjy_A 136 PRAPRVKIRVDDARMVAESFT-------------------------------PASRDVIIRDVFAGAI------TPQNFT 178 (317)
T ss_dssp CCTTTEEEEESCHHHHHHTCC-------------------------------TTCEEEEEECCSTTSC------CCGGGS
T ss_pred cCCCceEEEECcHHHHHhhcc-------------------------------CCCCCEEEECCCCccc------cchhhh
Confidence 778999999999999997643 3679999999876632 478899
Q ss_pred cHHHHHHHHHccCCCcEEEEEeccCC-hhHHHHHHHHHHHhccceEEeee------cCCccEEEEEecCCCcC
Q 004164 668 EGSFLLTVKDALSEQGLFIVNLVSRS-QATKDMVISRMKMVFNHLFCLQL------EEDVNLVLFGLSSESCI 733 (771)
Q Consensus 668 ~~~fl~~~~~~L~~~Gilv~Nl~~~~-~~~~~~v~~~l~~vF~~v~~~~~------~~~~N~Vl~a~~~~~~~ 733 (771)
+.+||+.++++|+|||+|++|+.+.. ......++.+|+++|+++..+.. .+.+|.|++|++.+...
T Consensus 179 t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~v~~~~~~~~~~g~~~gN~Vl~As~~plp~ 251 (317)
T 3gjy_A 179 TVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFEHVAVIADPPMLKGRRYGNIILMGSDTEFFS 251 (317)
T ss_dssp BHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCSEEEEEECHHHHTTSSCEEEEEEEESSCCCC
T ss_pred HHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCCceEEEEecCCCCCCcCceEEEEEECCCCCc
Confidence 99999999999999999999997543 24567889999999999888753 25689999999887543
No 2
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.91 E-value=1.2e-23 Score=222.31 Aligned_cols=169 Identities=20% Similarity=0.351 Sum_probs=137.3
Q ss_pred hhHHHHHHHHhhhhhhhhhhhhccCCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc-----CCCCC
Q 004164 516 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF-----GFTQD 590 (771)
Q Consensus 516 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F-----g~~~~ 590 (771)
+.||.. +++++|..+ +++++||+||+|+|++++.+.++.+..+|++|||||+|+++|++|| +..+|
T Consensus 67 ~~YhE~-l~h~~l~~~--------p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~d 137 (294)
T 3o4f_A 67 FIYHEM-MTHVPLLAH--------GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDD 137 (294)
T ss_dssp HHHHHH-HHHHHHHHS--------SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGC
T ss_pred HHHHHH-HHHHHHhhC--------CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCC
Confidence 578875 445566554 7889999999999999999999988889999999999999999999 33478
Q ss_pred CCeeEEEcchHHHHHhhccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHH
Q 004164 591 KSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGS 670 (771)
Q Consensus 591 ~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~ 670 (771)
+|++++++||++||++.. .+||+||+|++++.. |+..|++.+
T Consensus 138 pRv~v~~~Dg~~~l~~~~--------------------------------~~yDvIi~D~~dp~~------~~~~L~t~e 179 (294)
T 3o4f_A 138 PRFKLVIDDGVNFVNQTS--------------------------------QTFDVIISDCTDPIG------PGESLFTSA 179 (294)
T ss_dssp TTEEEEESCTTTTTSCSS--------------------------------CCEEEEEESCCCCCC------TTCCSSCCH
T ss_pred CcEEEEechHHHHHhhcc--------------------------------ccCCEEEEeCCCcCC------CchhhcCHH
Confidence 999999999999987643 679999998866532 578899999
Q ss_pred HHHHHHHccCCCcEEEEEeccC--ChhHHHHHHHHHHHhccceEEee--ec---CCccEEEEEecCCC
Q 004164 671 FLLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQ--LE---EDVNLVLFGLSSES 731 (771)
Q Consensus 671 fl~~~~~~L~~~Gilv~Nl~~~--~~~~~~~v~~~l~~vF~~v~~~~--~~---~~~N~Vl~a~~~~~ 731 (771)
|++.++++|+|+|+++++.-+. +......++++++++|+.+..+. ++ .+.....+|++...
T Consensus 180 Fy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~~v~~~~~~vPty~~g~w~f~~as~~~~ 247 (294)
T 3o4f_A 180 FYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDNDA 247 (294)
T ss_dssp HHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHCSEEEEEEECCTTSSSSCEEEEEEESCTT
T ss_pred HHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhCCceeeeeeeeccCCCcceeheeEECCCc
Confidence 9999999999999999987543 34455678899999999875543 33 24456777876653
No 3
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=99.86 E-value=1e-20 Score=205.52 Aligned_cols=174 Identities=12% Similarity=0.096 Sum_probs=129.9
Q ss_pred hhHHHHHHHHhhhhhhhhhhhhccCCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC--------
Q 004164 516 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-------- 587 (771)
Q Consensus 516 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~-------- 587 (771)
..||+.|+... +.. ..+++||+||+|+|++++.+.++.+ .+|++|||||+|+++|++||..
T Consensus 190 ~~Y~e~l~h~~-l~~---------~~pkrVLIIGgGdG~~~revlkh~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~ 258 (381)
T 3c6k_A 190 LAYTRAIMGSG-KED---------YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDN 258 (381)
T ss_dssp HHHHHHHTTTT-CCC---------CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSS
T ss_pred HHHHHHHHHHH-hhc---------CCCCeEEEECCCcHHHHHHHHhcCC-ceeEEEccCHHHHHHHHhhchhhhhhhhcc
Confidence 35888776543 332 3468999999999999999988755 6999999999999999999842
Q ss_pred CCCCCeeEEEcchHHHHHhhccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcc
Q 004164 588 TQDKSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV 667 (771)
Q Consensus 588 ~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~ 667 (771)
+.++|++++++||++||++... .+.+||+||+|+++...+.+...|+..++
T Consensus 259 pr~~rv~vii~Da~~fl~~~~~-----------------------------~~~~yDvIIvDl~D~~~s~~p~g~a~~Lf 309 (381)
T 3c6k_A 259 LKGDCYQVLIEDCIPVLKRYAK-----------------------------EGREFDYVINDLTAVPISTSPEEDSTWEF 309 (381)
T ss_dssp SEETTEEEEESCHHHHHHHHHH-----------------------------HTCCEEEEEEECCSSCCCCC----CHHHH
T ss_pred ccccceeeehHHHHHHHHhhhh-----------------------------ccCceeEEEECCCCCcccCcccCcchHHH
Confidence 2357899999999999987641 13679999999977654444455677899
Q ss_pred cHHHHHHHHHccCCCcEEEEEeccC-ChhHHHHHHHHHHHhccceEEe----eec--CCccEEEEEecC
Q 004164 668 EGSFLLTVKDALSEQGLFIVNLVSR-SQATKDMVISRMKMVFNHLFCL----QLE--EDVNLVLFGLSS 729 (771)
Q Consensus 668 ~~~fl~~~~~~L~~~Gilv~Nl~~~-~~~~~~~v~~~l~~vF~~v~~~----~~~--~~~N~Vl~a~~~ 729 (771)
+.+||+.++++|+|+|+++.+.-+. ..+....+.++|+++|+.+... .++ .+.....+|++.
T Consensus 310 t~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~vF~~v~~~~~~~~VPSy~~~W~F~~aSK~ 378 (381)
T 3c6k_A 310 LRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEFSKEIVCVPSYLELWVFYTVWKK 378 (381)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEEEEEEECCGGGSSCEEEEEEEEC
T ss_pred HHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHhCCcceEeeEEEEecCCCCceeeeEEECC
Confidence 9999999999999999999875332 2344567789999999976322 222 234556667654
No 4
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.85 E-value=3.8e-20 Score=195.95 Aligned_cols=167 Identities=17% Similarity=0.290 Sum_probs=134.3
Q ss_pred hhHHHHHHHHhhhhhhhhhhhhccCCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc-----CCCCC
Q 004164 516 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF-----GFTQD 590 (771)
Q Consensus 516 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F-----g~~~~ 590 (771)
+.||..|. ++++..+ +.+.+||+||+|+|.++..+..+.+..+|++|||||.|+++|+++| ++ .+
T Consensus 59 ~~y~e~l~-~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~-~~ 128 (275)
T 1iy9_A 59 FVYHEMVA-HVPLFTH--------PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKL-DD 128 (275)
T ss_dssp HHHHHHHH-HHHHHHS--------SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTT-TS
T ss_pred hHHHHHHH-HHHHhhC--------CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcccc-CC
Confidence 67887544 5554433 4678999999999999999998877789999999999999999999 44 57
Q ss_pred CCeeEEEcchHHHHHhhccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHH
Q 004164 591 KSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGS 670 (771)
Q Consensus 591 ~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~ 670 (771)
+|++++++||++|+.... .+||+|++|..... +|+..+++.+
T Consensus 129 ~rv~v~~~D~~~~l~~~~--------------------------------~~fD~Ii~d~~~~~------~~~~~l~~~~ 170 (275)
T 1iy9_A 129 PRVDVQVDDGFMHIAKSE--------------------------------NQYDVIMVDSTEPV------GPAVNLFTKG 170 (275)
T ss_dssp TTEEEEESCSHHHHHTCC--------------------------------SCEEEEEESCSSCC------SCCCCCSTTH
T ss_pred CceEEEECcHHHHHhhCC--------------------------------CCeeEEEECCCCCC------CcchhhhHHH
Confidence 899999999999987632 57999999875532 2578889999
Q ss_pred HHHHHHHccCCCcEEEEEeccC--ChhHHHHHHHHHHHhccceEEee--ecC---CccEEEEEecCC
Q 004164 671 FLLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQ--LEE---DVNLVLFGLSSE 730 (771)
Q Consensus 671 fl~~~~~~L~~~Gilv~Nl~~~--~~~~~~~v~~~l~~vF~~v~~~~--~~~---~~N~Vl~a~~~~ 730 (771)
|++.++++|+|||+|++|..+. +......++++++++|+++..+. ++. +.+.+++|++..
T Consensus 171 ~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~~~~ask~~ 237 (275)
T 1iy9_A 171 FYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTFTIGSKKY 237 (275)
T ss_dssp HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEEEEEEESSC
T ss_pred HHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceEEEEeeCCC
Confidence 9999999999999999997653 45667788999999999866554 332 346677888753
No 5
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.84 E-value=2.9e-20 Score=187.50 Aligned_cols=190 Identities=32% Similarity=0.607 Sum_probs=153.4
Q ss_pred CCCCHhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHH
Q 004164 24 DFTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVV 103 (771)
Q Consensus 24 ~f~~~~yWd~~y~~~~~~~~~ew~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~ 103 (771)
+|...+||+++|........++|+..+..+...+..++. ++.+|||+|||+|.++..+++.+..+|+++|+|+.+
T Consensus 3 ~~~~~~~W~~~y~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~ 77 (215)
T 2pxx_A 3 GYREVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPELR-----PEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVV 77 (215)
T ss_dssp GGGCHHHHHHHTTTTTTSCCCCTTCCHHHHHHHHGGGCC-----TTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHH
T ss_pred cccchhHHHHHhccCCCCCCcccccCHHHHHHHHHHhcC-----CCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHH
Confidence 577899999999876334568899999888877777763 678999999999999999999877689999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEeccccccccCcc--------cchHHHHHHHHHHHHccccCeEEE
Q 004164 104 ISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPE--------LGHKLGNQYLSEVKRLLKSGGKFV 175 (771)
Q Consensus 104 i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l~~~~--------~~~~~~~~~l~~i~rvLkpGG~~i 175 (771)
++.++++.. ..+++.+.++|+.++++++++||+|++.++++++.... ........+++++.++|+|||+++
T Consensus 78 ~~~a~~~~~-~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li 156 (215)
T 2pxx_A 78 VAAMQACYA-HVPQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFI 156 (215)
T ss_dssp HHHHHHHTT-TCTTCEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHhcc-cCCCcEEEEcchhcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEE
Confidence 998877764 34689999999999988889999999999998875221 011236799999999999999999
Q ss_pred EEEcCcchhhcchhhhhccCcEEEEeecCCCCCCCCCCccEEEEEEEcCC
Q 004164 176 CLTLAESHVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMVVADKENS 225 (771)
Q Consensus 176 i~~~~~~~~~~~l~~~~~~~w~~~~~~i~~~~~~~~~l~~f~~v~~k~~~ 225 (771)
+.++..++....++......|......+. ....+|+|++++.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 200 (215)
T 2pxx_A 157 SMTSAAPHFRTRHYAQAYYGWSLRHATYG------SGFHFHLYLMHKGGK 200 (215)
T ss_dssp EEESCCHHHHHHHHCCGGGCEEEEEEEES------GGGCEEEEEEEETCC
T ss_pred EEeCCCcHHHHHHHhccccCcEEEEEEec------CcceEEEEEEEeCCC
Confidence 99999888776666555557887766652 235678888887654
No 6
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.83 E-value=1.6e-19 Score=194.79 Aligned_cols=184 Identities=15% Similarity=0.159 Sum_probs=139.5
Q ss_pred hhHHHHHHHHhhhhhhhhhhhhccCCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-----CCC
Q 004164 516 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-----TQD 590 (771)
Q Consensus 516 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~-----~~~ 590 (771)
+.||..|. ++++..+ +.+.+||+||+|+|.++..+..+.|..+|++||+||.++++|+++|.. ..+
T Consensus 61 ~~Y~e~l~-~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~ 131 (314)
T 1uir_A 61 YIYHETLV-HPAMLTH--------PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDD 131 (314)
T ss_dssp HHHHHHHH-HHHHHHS--------SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGC
T ss_pred hHHHHHHH-HHHHhcC--------CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccC
Confidence 56887655 3444433 466899999999999999999987778999999999999999999842 136
Q ss_pred CCeeEEEcchHHHHHhhccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHH
Q 004164 591 KSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGS 670 (771)
Q Consensus 591 ~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~ 670 (771)
++++++++|+.+++.... .+||+|++|..... ++.+|+..+++.+
T Consensus 132 ~~v~~~~~D~~~~l~~~~--------------------------------~~fD~Ii~d~~~~~---~~~~~~~~l~~~~ 176 (314)
T 1uir_A 132 PRAVLVIDDARAYLERTE--------------------------------ERYDVVIIDLTDPV---GEDNPARLLYTVE 176 (314)
T ss_dssp TTEEEEESCHHHHHHHCC--------------------------------CCEEEEEEECCCCB---STTCGGGGGSSHH
T ss_pred CceEEEEchHHHHHHhcC--------------------------------CCccEEEECCCCcc---cccCcchhccHHH
Confidence 899999999999987632 57999999875532 2345678888999
Q ss_pred HHHHHHHccCCCcEEEEEeccC---ChhHHHHHHHHHHHhccceEEee----ecCCccEEEEEecCCC--cCCCCCHHHH
Q 004164 671 FLLTVKDALSEQGLFIVNLVSR---SQATKDMVISRMKMVFNHLFCLQ----LEEDVNLVLFGLSSES--CIKDNSFPEA 741 (771)
Q Consensus 671 fl~~~~~~L~~~Gilv~Nl~~~---~~~~~~~v~~~l~~vF~~v~~~~----~~~~~N~Vl~a~~~~~--~~~~~~l~~~ 741 (771)
|++.++++|+|||+|++|..+. +......+.+.++++|+++..+. ...+.+.+++|++... ......+.++
T Consensus 177 ~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~~~g~~~~~~as~~~~p~~~~~~~~~~~ 256 (314)
T 1uir_A 177 FYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYKNHIPGFFLNFGFLLASDAFDPAAFSEGVIEAR 256 (314)
T ss_dssp HHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEEEEEGGGTEEEEEEEEESSSCTTCCCTTHHHHH
T ss_pred HHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEEEecCCCCCeEEEEEEECCCCcccCCHHHHHHH
Confidence 9999999999999999997543 34566788999999999865442 2344677889988732 2333335444
Q ss_pred HH
Q 004164 742 AV 743 (771)
Q Consensus 742 a~ 743 (771)
..
T Consensus 257 ~~ 258 (314)
T 1uir_A 257 IR 258 (314)
T ss_dssp HH
T ss_pred hh
Confidence 33
No 7
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.80 E-value=2.2e-18 Score=183.00 Aligned_cols=165 Identities=23% Similarity=0.362 Sum_probs=129.0
Q ss_pred hhHHHHHHHHhhhhhhhhhhhhccCCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc----CCC---
Q 004164 516 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF----GFT--- 588 (771)
Q Consensus 516 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F----g~~--- 588 (771)
+.||..|. .+++..+ +.+.+||+||+|+|.++..+..+ |..+|++||+||.++++|+++| ++.
T Consensus 59 ~~y~e~l~-~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~ 128 (281)
T 1mjf_A 59 RSYHEPLV-HPAMLAH--------PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAM 128 (281)
T ss_dssp HHHHHHHH-HHHHHHS--------SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHH
T ss_pred hHHHHHHH-HHHHhhC--------CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhcccccccc
Confidence 56887655 4444332 45689999999999999999988 8789999999999999999999 321
Q ss_pred ---CCCCeeEEEcchHHHHHhhccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcC
Q 004164 589 ---QDKSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAAD 665 (771)
Q Consensus 589 ---~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~ 665 (771)
.+++++++++||.+++.. . .+||+|++|..... +|+..
T Consensus 129 ~~~~~~~v~~~~~D~~~~l~~-~--------------------------------~~fD~Ii~d~~~~~------~~~~~ 169 (281)
T 1mjf_A 129 LNGKHEKAKLTIGDGFEFIKN-N--------------------------------RGFDVIIADSTDPV------GPAKV 169 (281)
T ss_dssp HTTCCSSEEEEESCHHHHHHH-C--------------------------------CCEEEEEEECCCCC-----------
T ss_pred ccCCCCcEEEEECchHHHhcc-c--------------------------------CCeeEEEECCCCCC------Ccchh
Confidence 367999999999999876 4 56999999875431 25677
Q ss_pred cccHHHHHHHHHccCCCcEEEEEeccC--ChhHHHHHHHHHHHhccceEEeee--c--CCccEEEEEecC
Q 004164 666 FVEGSFLLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQL--E--EDVNLVLFGLSS 729 (771)
Q Consensus 666 f~~~~fl~~~~~~L~~~Gilv~Nl~~~--~~~~~~~v~~~l~~vF~~v~~~~~--~--~~~N~Vl~a~~~ 729 (771)
+++.+|++.++++|+|||++++|..+. .......+.+.++++|+++..+.. + .+.+.+++|++.
T Consensus 170 l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~g~~~~~~as~~ 239 (281)
T 1mjf_A 170 LFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSFPVIGYASPWAFLVGVKG 239 (281)
T ss_dssp TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEECCTTSSSSEEEEEEEES
T ss_pred hhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEEecCCCCceEEEEEeeCC
Confidence 889999999999999999999997543 456677889999999998655432 2 346788999887
No 8
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.79 E-value=6.2e-18 Score=183.10 Aligned_cols=168 Identities=15% Similarity=0.215 Sum_probs=120.6
Q ss_pred hhHHHHHHHHhhhhhhhhhhhhccCCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-----CC
Q 004164 516 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-----QD 590 (771)
Q Consensus 516 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~-----~~ 590 (771)
+.||++|+.. ++ .+ +.+.+||+||+|+|++++.+..+.+ .+|++|||||.|+++|++||... .+
T Consensus 173 ~~YhE~l~~~-~~-~~--------p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~d 241 (364)
T 2qfm_A 173 LAYTRAIMGS-GK-ED--------YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDN 241 (364)
T ss_dssp HHHHHHHTTT-TC-CC--------CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSS
T ss_pred hHHHHHHhhh-hh-hC--------CCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccc
Confidence 4699876543 22 22 5789999999999999999888866 79999999999999999999521 23
Q ss_pred ---CCeeEEEcchHHHHHhhccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCC-CCCCCCCCcCCcCc
Q 004164 591 ---KSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDS-PDSSSGMTCPAADF 666 (771)
Q Consensus 591 ---~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s-~d~~~g~s~pp~~f 666 (771)
++++++++||++|+++... .+.+||+||+|... +... .|..+
T Consensus 242 p~~~rv~vi~~Da~~~L~~~~~-----------------------------~~~~fDvII~D~~d~P~~~-----~p~~L 287 (364)
T 2qfm_A 242 LKGDCYQVLIEDCIPVLKRYAK-----------------------------EGREFDYVINDLTAVPIST-----SPEED 287 (364)
T ss_dssp SEETTEEEEESCHHHHHHHHHH-----------------------------HTCCEEEEEEECCSSCCCC-----C----
T ss_pred cCCCcEEEEECcHHHHHHhhhc-----------------------------cCCCceEEEECCCCcccCc-----Cchhh
Confidence 3899999999999987520 02679999999865 3111 14458
Q ss_pred ccHHHHHHH----HHccCCCcEEEEEeccCChhHHHHHHH-HHHHhccceEE----eeecCCccEEEEEec
Q 004164 667 VEGSFLLTV----KDALSEQGLFIVNLVSRSQATKDMVIS-RMKMVFNHLFC----LQLEEDVNLVLFGLS 728 (771)
Q Consensus 667 ~~~~fl~~~----~~~L~~~Gilv~Nl~~~~~~~~~~v~~-~l~~vF~~v~~----~~~~~~~N~Vl~a~~ 728 (771)
++.+|++.+ +++|+|||+++++..+..-.....++. .|+++|+.|.. ..++.......|+..
T Consensus 288 ~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~~F~~v~~~~~~~~vPsy~~~w~f~~~ 358 (364)
T 2qfm_A 288 STWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEFSKEIVCVPSYLELWVFYTV 358 (364)
T ss_dssp CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEEEEEEECCGGGSSCEEEEEE
T ss_pred hHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHhCCceEEeeEeeecCCchhheEeEEe
Confidence 999999999 999999999999987665332233444 48889997644 334443334444443
No 9
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.79 E-value=6.8e-18 Score=179.38 Aligned_cols=167 Identities=22% Similarity=0.328 Sum_probs=132.2
Q ss_pred hhHHHHHHHHhhhhhhhhhhhhccCCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC----CCC
Q 004164 516 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT----QDK 591 (771)
Q Consensus 516 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~----~~~ 591 (771)
+.||. |++++++..+ +.+.+||+||+|+|.++..+..+.|..+|++||+||.|+++|+++|... .++
T Consensus 62 ~~Y~e-~l~~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~ 132 (283)
T 2i7c_A 62 FAYHE-MMTHVPMTVS--------KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDK 132 (283)
T ss_dssp HHHHH-HHHHHHHTTS--------SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGST
T ss_pred hhHHH-HHHHHHHhcC--------CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCC
Confidence 56876 6666665543 4678999999999999999998877789999999999999999998542 368
Q ss_pred CeeEEEcchHHHHHhhccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHH
Q 004164 592 SLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSF 671 (771)
Q Consensus 592 r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~f 671 (771)
+++++++|+.+++.... .+||+||+|.... . .|+..+++.+|
T Consensus 133 ~v~~~~~D~~~~l~~~~--------------------------------~~fD~Ii~d~~~~--~----~~~~~l~~~~~ 174 (283)
T 2i7c_A 133 RVNVFIEDASKFLENVT--------------------------------NTYDVIIVDSSDP--I----GPAETLFNQNF 174 (283)
T ss_dssp TEEEEESCHHHHHHHCC--------------------------------SCEEEEEEECCCT--T----TGGGGGSSHHH
T ss_pred cEEEEECChHHHHHhCC--------------------------------CCceEEEEcCCCC--C----CcchhhhHHHH
Confidence 99999999999987643 5799999987543 2 25678889999
Q ss_pred HHHHHHccCCCcEEEEEeccC--ChhHHHHHHHHHHHhccceEEe--eecC--Ccc-EEEEEecC
Q 004164 672 LLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCL--QLEE--DVN-LVLFGLSS 729 (771)
Q Consensus 672 l~~~~~~L~~~Gilv~Nl~~~--~~~~~~~v~~~l~~vF~~v~~~--~~~~--~~N-~Vl~a~~~ 729 (771)
++.++++|+|||+|++|..+. .......+..+++++|+++..+ .++. +++ ..++|++.
T Consensus 175 l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~y~~g~~g~~~~s~~ 239 (283)
T 2i7c_A 175 YEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCCSKT 239 (283)
T ss_dssp HHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred HHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceEEEEEEcCCcCCCcEEEEEEeCC
Confidence 999999999999999997543 4455677899999999976443 3443 244 46777765
No 10
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.77 E-value=1.3e-17 Score=179.58 Aligned_cols=167 Identities=18% Similarity=0.291 Sum_probs=122.6
Q ss_pred hhHHHHHHHHhhhhhhhhhhhhccCCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC----CCC
Q 004164 516 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT----QDK 591 (771)
Q Consensus 516 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~----~~~ 591 (771)
+.||. |++++++..+ +.+.+||+||+|+|.++..+..+.|..+|++||+||.++++|+++|... .++
T Consensus 92 ~~Y~e-~l~~l~l~~~--------~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~ 162 (314)
T 2b2c_A 92 FSYQE-MLAHLPMFAH--------PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHP 162 (314)
T ss_dssp SHHHH-HHHHHHHHHS--------SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCT
T ss_pred hHHHH-HHHHHHHhhC--------CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCC
Confidence 46876 6666665443 4568999999999999999998888889999999999999999999432 368
Q ss_pred CeeEEEcchHHHHHhhccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHH
Q 004164 592 SLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSF 671 (771)
Q Consensus 592 r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~f 671 (771)
+++++++|+.+++.... .+||+||+|.... . .|+..+++.+|
T Consensus 163 rv~~~~~D~~~~l~~~~--------------------------------~~fD~Ii~d~~~~--~----~~~~~l~t~~~ 204 (314)
T 2b2c_A 163 KLDLFCGDGFEFLKNHK--------------------------------NEFDVIITDSSDP--V----GPAESLFGQSY 204 (314)
T ss_dssp TEEEECSCHHHHHHHCT--------------------------------TCEEEEEECCC-------------------H
T ss_pred CEEEEEChHHHHHHhcC--------------------------------CCceEEEEcCCCC--C----CcchhhhHHHH
Confidence 99999999999987632 5799999987533 1 25677888999
Q ss_pred HHHHHHccCCCcEEEEEecc--CChhHHHHHHHHHHHhccceEEee--ecC--Ccc-EEEEEecC
Q 004164 672 LLTVKDALSEQGLFIVNLVS--RSQATKDMVISRMKMVFNHLFCLQ--LEE--DVN-LVLFGLSS 729 (771)
Q Consensus 672 l~~~~~~L~~~Gilv~Nl~~--~~~~~~~~v~~~l~~vF~~v~~~~--~~~--~~N-~Vl~a~~~ 729 (771)
|+.++++|+|||+|+++..+ .+......+.+.++++|+++..+. ++. .++ .+++|++.
T Consensus 205 l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~~~~~~iP~~~~g~~g~~~ask~ 269 (314)
T 2b2c_A 205 YELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVTYAQSIVSTYPSGSMGYLICAKN 269 (314)
T ss_dssp HHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred HHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcceEEEEEecCcCCCceEEEEEeCC
Confidence 99999999999999998633 244556778899999999764433 333 234 57778766
No 11
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.77 E-value=1.1e-17 Score=178.83 Aligned_cols=169 Identities=20% Similarity=0.250 Sum_probs=127.2
Q ss_pred hhHHHHHHHHhhhhhhhhhhhhccCCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcC----CCCCC
Q 004164 516 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG----FTQDK 591 (771)
Q Consensus 516 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg----~~~~~ 591 (771)
+.||.. +..+++..+ +.+.+||+||+|+|.++..+..+.|..+|++||+||.++++|+++|. -..++
T Consensus 74 ~~y~e~-l~~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~ 144 (296)
T 1inl_A 74 FMYHEM-LAHVPMFLH--------PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDP 144 (296)
T ss_dssp HHHHHH-HHHHHHHHS--------SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCT
T ss_pred hHHHHH-HhHHHHhcC--------CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCC
Confidence 568874 445554432 45689999999999999999988777899999999999999999982 12368
Q ss_pred CeeEEEcchHHHHHhhccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHH
Q 004164 592 SLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSF 671 (771)
Q Consensus 592 r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~f 671 (771)
+++++++|+.+++.... .+||+|++|+.... . .|+..+++.+|
T Consensus 145 ~v~~~~~D~~~~l~~~~--------------------------------~~fD~Ii~d~~~~~-~----~~~~~l~~~~~ 187 (296)
T 1inl_A 145 RAEIVIANGAEYVRKFK--------------------------------NEFDVIIIDSTDPT-A----GQGGHLFTEEF 187 (296)
T ss_dssp TEEEEESCHHHHGGGCS--------------------------------SCEEEEEEEC---------------CCSHHH
T ss_pred ceEEEECcHHHHHhhCC--------------------------------CCceEEEEcCCCcc-c----CchhhhhHHHH
Confidence 99999999999976532 57999999875431 1 25677889999
Q ss_pred HHHHHHccCCCcEEEEEeccC--ChhHHHHHHHHHHHhccceEEee--ec---CCccEEEEEecCC
Q 004164 672 LLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQ--LE---EDVNLVLFGLSSE 730 (771)
Q Consensus 672 l~~~~~~L~~~Gilv~Nl~~~--~~~~~~~v~~~l~~vF~~v~~~~--~~---~~~N~Vl~a~~~~ 730 (771)
|+.++++|+|||+|+++..+. +......++++++++|+++..+. ++ .+.+.+++|++..
T Consensus 188 l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~as~~~ 253 (296)
T 1inl_A 188 YQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWSYTFASKGI 253 (296)
T ss_dssp HHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEEEEEEESSC
T ss_pred HHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceEEEEecCCC
Confidence 999999999999999997653 45567788999999999866544 22 3445677887653
No 12
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.77 E-value=3.6e-18 Score=178.49 Aligned_cols=144 Identities=18% Similarity=0.325 Sum_probs=112.9
Q ss_pred CCHhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHH
Q 004164 26 TSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVIS 105 (771)
Q Consensus 26 ~~~~yWd~~y~~~~~~~~~ew~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~ 105 (771)
.+.+||+++|.... ..+.+....+.+...+...+.. .++.+|||+|||+|..+..|++.|+ +|+|||+|+.||+
T Consensus 31 ~~~~~Wd~~y~~~~--~~~~~~~~~~~l~~~~~~~~~~---~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~ 104 (252)
T 2gb4_A 31 LTLEDWKEKWVTRH--ISFHQEQGHQLLKKHLDTFLKG---QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIR 104 (252)
T ss_dssp CCHHHHHHHHHHTC--CTTCCTTCCHHHHHHHHHHHTT---CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHH
T ss_pred CCHHHHHHHHhcCC--CCcccCCCCHHHHHHHHHhccC---CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHH
Confidence 46889999998752 2332223333444444444321 3678999999999999999999998 9999999999999
Q ss_pred HHHHHhhc------------------CCCCcEEEEeecCCCCCCC-CCccEEEeccccccccCcccchHHHHHHHHHHHH
Q 004164 106 DMLRRNVR------------------DRSDMRWRVMDMTSMQFMD-ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKR 166 (771)
Q Consensus 106 ~~~~~~~~------------------~~~~i~~~~~D~~~l~~~~-~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~r 166 (771)
.+++++.. ...+++|+++|+.++++++ ++||+|++.++++++.... ...+++++.+
T Consensus 105 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~-----~~~~l~~~~~ 179 (252)
T 2gb4_A 105 EFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGD-----HDRYADIILS 179 (252)
T ss_dssp HHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGG-----HHHHHHHHHH
T ss_pred HHHHhcccccccccccccccccccccCCCceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHH-----HHHHHHHHHH
Confidence 98776631 2468999999999998764 8999999999999986544 6789999999
Q ss_pred ccccCeEEEEEEcC
Q 004164 167 LLKSGGKFVCLTLA 180 (771)
Q Consensus 167 vLkpGG~~ii~~~~ 180 (771)
+|||||+|+++++.
T Consensus 180 ~LkpGG~l~l~~~~ 193 (252)
T 2gb4_A 180 LLRKEFQYLVAVLS 193 (252)
T ss_dssp TEEEEEEEEEEEEE
T ss_pred HcCCCeEEEEEEEe
Confidence 99999999876543
No 13
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.75 E-value=3.7e-18 Score=182.26 Aligned_cols=168 Identities=20% Similarity=0.331 Sum_probs=122.8
Q ss_pred hhHHHHHHHHhhhhhhhhhhhhccCCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-----CCC
Q 004164 516 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-----TQD 590 (771)
Q Consensus 516 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~-----~~~ 590 (771)
+.||. |++.+++..+ +.+.+||+||+|+|.++..+..+.+..+|++|||||.|+++|+++|.. ..+
T Consensus 67 ~~Y~e-~l~~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~ 137 (294)
T 3adn_A 67 FIYHE-MMTHVPLLAH--------GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDD 137 (294)
T ss_dssp HHHHH-HHHHHHHHHS--------TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTC
T ss_pred hHHHH-HHHHHHHhcC--------CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccC
Confidence 56766 5555555443 567899999999999999999987778999999999999999999842 246
Q ss_pred CCeeEEEcchHHHHHhhccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHH
Q 004164 591 KSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGS 670 (771)
Q Consensus 591 ~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~ 670 (771)
++++++++||++|++.. ..+||+||+|...+. .|+..+++.+
T Consensus 138 ~rv~~~~~D~~~~l~~~--------------------------------~~~fDvIi~D~~~p~------~~~~~l~~~~ 179 (294)
T 3adn_A 138 PRFKLVIDDGVNFVNQT--------------------------------SQTFDVIISDCTDPI------GPGESLFTSA 179 (294)
T ss_dssp TTCCEECSCSCC---CC--------------------------------CCCEEEEEECC----------------CCHH
T ss_pred CceEEEEChHHHHHhhc--------------------------------CCCccEEEECCCCcc------CcchhccHHH
Confidence 89999999999998653 267999999875432 2577899999
Q ss_pred HHHHHHHccCCCcEEEEEeccC--ChhHHHHHHHHHHHhccceEEee--ecCC-cc--EEEEEecCC
Q 004164 671 FLLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQ--LEED-VN--LVLFGLSSE 730 (771)
Q Consensus 671 fl~~~~~~L~~~Gilv~Nl~~~--~~~~~~~v~~~l~~vF~~v~~~~--~~~~-~N--~Vl~a~~~~ 730 (771)
|++.++++|+|||+|++|..+. ..+....++.+++++|+++..+. ++.. .+ ..++|++..
T Consensus 180 f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~as~~~ 246 (294)
T 3adn_A 180 FYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDND 246 (294)
T ss_dssp HHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEEECTTSSSSEEEEEEEESCT
T ss_pred HHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEEEecccCCCceEEEEEeCCc
Confidence 9999999999999999998543 33556778999999999865443 3432 23 355666654
No 14
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.71 E-value=4.5e-16 Score=167.04 Aligned_cols=168 Identities=20% Similarity=0.228 Sum_probs=125.0
Q ss_pred hhHHHHHHHHhhhhhhhhhhhhccCCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcC----CCCCC
Q 004164 516 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG----FTQDK 591 (771)
Q Consensus 516 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg----~~~~~ 591 (771)
..||..| ..+++..+ +.+.+||+||+|+|.++..+..+.+..+|++||+||.++++|+++|. -..++
T Consensus 79 ~~y~e~l-~~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~ 149 (304)
T 3bwc_A 79 FVYHEVL-GHTSLCSH--------PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADP 149 (304)
T ss_dssp HHHHHHH-HHHHHTTS--------SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCT
T ss_pred hHHHHHH-hhhhhhcC--------CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCC
Confidence 4677644 44444332 45689999999999999999988777899999999999999999982 12468
Q ss_pred CeeEEEcchHHHHHhhccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHH
Q 004164 592 SLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSF 671 (771)
Q Consensus 592 r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~f 671 (771)
+++++++|+.+++.... ..+||+|++|..... .|+..+++.+|
T Consensus 150 ~v~~~~~D~~~~~~~~~-------------------------------~~~fDvIi~d~~~~~------~~~~~l~~~~~ 192 (304)
T 3bwc_A 150 RATVRVGDGLAFVRQTP-------------------------------DNTYDVVIIDTTDPA------GPASKLFGEAF 192 (304)
T ss_dssp TEEEEESCHHHHHHSSC-------------------------------TTCEEEEEEECC---------------CCHHH
T ss_pred cEEEEECcHHHHHHhcc-------------------------------CCceeEEEECCCCcc------ccchhhhHHHH
Confidence 99999999999976522 257999999865432 25778889999
Q ss_pred HHHHHHccCCCcEEEEEeccC--ChhHHHHHHHHHHHh-ccceEEeee--c---CCccEEEEEecC
Q 004164 672 LLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMV-FNHLFCLQL--E---EDVNLVLFGLSS 729 (771)
Q Consensus 672 l~~~~~~L~~~Gilv~Nl~~~--~~~~~~~v~~~l~~v-F~~v~~~~~--~---~~~N~Vl~a~~~ 729 (771)
|+.++++|+|||+|+++..+. .......+.+.|+++ |+.+..+.. + .+....++|++.
T Consensus 193 l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~f~~as~~ 258 (304)
T 3bwc_A 193 YKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPCGSIGTLVCSKK 258 (304)
T ss_dssp HHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCEEEEEESS
T ss_pred HHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccCcceEEEEEeCC
Confidence 999999999999999987553 334567788999999 997655532 2 234557778876
No 15
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.71 E-value=2.2e-16 Score=169.46 Aligned_cols=167 Identities=18% Similarity=0.261 Sum_probs=122.5
Q ss_pred hhHHHHHHHHhhhhhhhhhhhhccCCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC----CCCC
Q 004164 516 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF----TQDK 591 (771)
Q Consensus 516 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~----~~~~ 591 (771)
..||. |++++++..+ ..+.+||+||+|+|.++..+..+.|..+|++||+||.++++|+++|.. ..++
T Consensus 79 ~~y~e-~l~~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~ 149 (304)
T 2o07_A 79 FSYQE-MIANLPLCSH--------PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSS 149 (304)
T ss_dssp HHHHH-HHHHHHHTTS--------SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCT
T ss_pred hHHHH-HHHHHHHhhC--------CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCC
Confidence 45765 5556655433 456899999999999999999887778999999999999999999842 1368
Q ss_pred CeeEEEcchHHHHHhhccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHH
Q 004164 592 SLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSF 671 (771)
Q Consensus 592 r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~f 671 (771)
+++++++|+.+++.... .+||+||+|..... .|+..+.+.+|
T Consensus 150 rv~v~~~Da~~~l~~~~--------------------------------~~fD~Ii~d~~~~~------~~~~~l~~~~~ 191 (304)
T 2o07_A 150 KLTLHVGDGFEFMKQNQ--------------------------------DAFDVIITDSSDPM------GPAESLFKESY 191 (304)
T ss_dssp TEEEEESCHHHHHHTCS--------------------------------SCEEEEEEECC-----------------CHH
T ss_pred cEEEEECcHHHHHhhCC--------------------------------CCceEEEECCCCCC------CcchhhhHHHH
Confidence 99999999999987532 57999999875432 24566788999
Q ss_pred HHHHHHccCCCcEEEEEecc--CChhHHHHHHHHHHHhccceEEe--eecCC---ccEEEEEecC
Q 004164 672 LLTVKDALSEQGLFIVNLVS--RSQATKDMVISRMKMVFNHLFCL--QLEED---VNLVLFGLSS 729 (771)
Q Consensus 672 l~~~~~~L~~~Gilv~Nl~~--~~~~~~~~v~~~l~~vF~~v~~~--~~~~~---~N~Vl~a~~~ 729 (771)
|+.++++|+|||+|+++..+ ........+.+.++++|+++... .++.. ...+++|++.
T Consensus 192 l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~~g~~g~~~as~~ 256 (304)
T 2o07_A 192 YQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKN 256 (304)
T ss_dssp HHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred HHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCceeEEEEeccccCcceEEEEEeCC
Confidence 99999999999999998744 34455677889999999976333 23332 2345677765
No 16
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.68 E-value=3.1e-16 Score=164.69 Aligned_cols=155 Identities=12% Similarity=0.026 Sum_probs=119.0
Q ss_pred hhHHHHHHHHhhhhhhhhhhhhccCCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC----CCCC
Q 004164 516 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF----TQDK 591 (771)
Q Consensus 516 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~----~~~~ 591 (771)
+.||.. ++++++..+ +.+.+||+||+|+|.++..+..+ + .+|++||+||.|+++|+++|.. ..++
T Consensus 56 ~~y~e~-l~~~~~~~~--------~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~ 124 (262)
T 2cmg_A 56 HIESEL-LAHMGGCTK--------KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNK 124 (262)
T ss_dssp HHHHHH-HHHHHHTTS--------SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCT
T ss_pred HHHHHH-HHHHhhhcC--------CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCC
Confidence 568764 444544432 45689999999999999988888 7 8999999999999999999843 1468
Q ss_pred CeeEEEcchHHHHHhhccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHH
Q 004164 592 SLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSF 671 (771)
Q Consensus 592 r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~f 671 (771)
+++++++||.+|+ .+||+||+|+ .++ ..|
T Consensus 125 rv~~~~~D~~~~~------------------------------------~~fD~Ii~d~--~dp-------------~~~ 153 (262)
T 2cmg_A 125 NFTHAKQLLDLDI------------------------------------KKYDLIFCLQ--EPD-------------IHR 153 (262)
T ss_dssp TEEEESSGGGSCC------------------------------------CCEEEEEESS--CCC-------------HHH
T ss_pred eEEEEechHHHHH------------------------------------hhCCEEEECC--CCh-------------HHH
Confidence 9999999999874 2499999974 221 239
Q ss_pred HHHHHHccCCCcEEEEEeccC--ChhHHHHHHHHHHHhccceEEeee--c-CCccEEEEEecCCCc
Q 004164 672 LLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQL--E-EDVNLVLFGLSSESC 732 (771)
Q Consensus 672 l~~~~~~L~~~Gilv~Nl~~~--~~~~~~~v~~~l~~vF~~v~~~~~--~-~~~N~Vl~a~~~~~~ 732 (771)
++.+++.|+|||+|+++..+. +......+..+++++|+++..+.. + .+.+.+++|++...+
T Consensus 154 ~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~~~~vP~~g~~~~~~as~~~~p 219 (262)
T 2cmg_A 154 IDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMPFVAPLRILSNKGYIYASFKTHP 219 (262)
T ss_dssp HHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEEEECCTTCTTCCEEEEEEESSCCT
T ss_pred HHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceEEEEEccCCCcccEEEEeeCCCCc
Confidence 999999999999999986543 334567788999999998755432 2 445667788876433
No 17
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.68 E-value=7e-16 Score=166.73 Aligned_cols=168 Identities=22% Similarity=0.344 Sum_probs=130.2
Q ss_pred hhHHHHHHHHhhhhhhhhhhhhccCCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC----CCCC
Q 004164 516 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF----TQDK 591 (771)
Q Consensus 516 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~----~~~~ 591 (771)
+.||. |+..+++..+ +.+.+||+||+|+|.++..+..+.|..+|++||+||.++++|++++.. ..++
T Consensus 100 ~~y~e-~l~~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~ 170 (321)
T 2pt6_A 100 FAYHE-MMTHVPMTVS--------KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDK 170 (321)
T ss_dssp HHHHH-HHHHHHHHHS--------SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGST
T ss_pred hHHHH-HHHHHHHhcC--------CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCC
Confidence 56766 4445554433 456899999999999999999887778999999999999999999853 1367
Q ss_pred CeeEEEcchHHHHHhhccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHH
Q 004164 592 SLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSF 671 (771)
Q Consensus 592 r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~f 671 (771)
+++++++|+.+++.... .+||+|++|.... . .|+..+++.+|
T Consensus 171 ~v~~~~~D~~~~l~~~~--------------------------------~~fDvIi~d~~~p--~----~~~~~l~~~~~ 212 (321)
T 2pt6_A 171 RVNVFIEDASKFLENVT--------------------------------NTYDVIIVDSSDP--I----GPAETLFNQNF 212 (321)
T ss_dssp TEEEEESCHHHHHHHCC--------------------------------SCEEEEEEECCCS--S----SGGGGGSSHHH
T ss_pred cEEEEEccHHHHHhhcC--------------------------------CCceEEEECCcCC--C----CcchhhhHHHH
Confidence 99999999999987532 5799999987432 2 25667888999
Q ss_pred HHHHHHccCCCcEEEEEeccC--ChhHHHHHHHHHHHhccceEEee--ecC--CccE-EEEEecCC
Q 004164 672 LLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQ--LEE--DVNL-VLFGLSSE 730 (771)
Q Consensus 672 l~~~~~~L~~~Gilv~Nl~~~--~~~~~~~v~~~l~~vF~~v~~~~--~~~--~~N~-Vl~a~~~~ 730 (771)
++.+++.|+|||+++++..+. +......++++++++|+++..+. ++. ++++ .++|++..
T Consensus 213 l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~f~~as~~~ 278 (321)
T 2pt6_A 213 YEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCCSKTD 278 (321)
T ss_dssp HHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEEEESST
T ss_pred HHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEEEeccccCceEEEEEeeCCC
Confidence 999999999999999987553 44567788999999999765443 333 2344 56677653
No 18
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.68 E-value=8.3e-17 Score=168.74 Aligned_cols=200 Identities=18% Similarity=0.183 Sum_probs=133.8
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCC
Q 004164 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (771)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~ 127 (771)
.......+...+.. ..++.+|||||||+|.++..+++.+..+|+++|+|+.+++.++++....+ ++++++++|+.+
T Consensus 30 ~~~~~~~~l~~l~~--~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 107 (267)
T 3kkz_A 30 SPEVTLKALSFIDN--LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDD 107 (267)
T ss_dssp CHHHHHHHHTTCCC--CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred CHHHHHHHHHhccc--CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhh
Confidence 33444445555541 25788999999999999999999866699999999999999988775554 569999999999
Q ss_pred CCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcchhhcchhhhhccCcEEEEeecCCCC
Q 004164 128 MQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIPQKS 207 (771)
Q Consensus 128 l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~~~~~l~~~~~~~w~~~~~~i~~~~ 207 (771)
+++++++||+|++.++++++ + ...+++++.++|||||++++.+..-.. ..........|...++.+....
T Consensus 108 ~~~~~~~fD~i~~~~~~~~~-~-------~~~~l~~~~~~LkpgG~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 177 (267)
T 3kkz_A 108 LPFRNEELDLIWSEGAIYNI-G-------FERGLNEWRKYLKKGGYLAVSECSWFT--DERPAEINDFWMDAYPEIDTIP 177 (267)
T ss_dssp CCCCTTCEEEEEESSCGGGT-C-------HHHHHHHHGGGEEEEEEEEEEEEEESS--SCCCHHHHHHHHHHCTTCEEHH
T ss_pred CCCCCCCEEEEEEcCCceec-C-------HHHHHHHHHHHcCCCCEEEEEEeeecC--CCChHHHHHHHHHhCCCCCCHH
Confidence 99888999999999999998 4 358999999999999999998864110 0000111111210011111110
Q ss_pred CCCCCCcc--EEEEEEEcCCccccccccccccCc------------CcCCcchHHHHHHHHHHHHHHHHHccC
Q 004164 208 SSEPSLQT--FMVVADKENSSVVLQVTSSFDHSS------------LDCNKNQAFGIHEALESENQTRREYSH 266 (771)
Q Consensus 208 ~~~~~l~~--f~~v~~k~~~~~~l~~~~~~~~y~------------~~~~~~~~~~~~~~~~~e~~~~~~~~~ 266 (771)
.-...+.. |..+- ....|...|.+.|. ......+..++++..++|+++++.|..
T Consensus 178 ~~~~~l~~aGf~~v~-----~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 245 (267)
T 3kkz_A 178 NQVAKIHKAGYLPVA-----TFILPENCWTDHYFTPKVAAQKIFLTKYAGNKIAEEFSMLQSIEEELYHKYKE 245 (267)
T ss_dssp HHHHHHHHTTEEEEE-----EEECCGGGTTTTTHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCEEEE-----EEECCHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 00011111 55443 22345556644441 123455777889999999999998864
No 19
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.68 E-value=4.6e-17 Score=164.26 Aligned_cols=107 Identities=18% Similarity=0.310 Sum_probs=92.3
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhc-------------CCCCcEEEEeecCCCCCCC-
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR-------------DRSDMRWRVMDMTSMQFMD- 132 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~-------------~~~~i~~~~~D~~~l~~~~- 132 (771)
.++.+|||+|||+|..+..|++.|+ +|+|+|+|+.||+.+++++.. ...+++++++|+.++++++
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 4678999999999999999999988 999999999999999887642 2468999999999998775
Q ss_pred CCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 133 ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 133 ~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
++||+|++.++++++...+ ...++++++++|||||++++++.
T Consensus 100 ~~fD~v~~~~~l~~l~~~~-----~~~~l~~~~r~LkpgG~~~l~~~ 141 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPADM-----RERYVQHLEALMPQACSGLLITL 141 (203)
T ss_dssp HSEEEEEEESCGGGSCHHH-----HHHHHHHHHHHSCSEEEEEEEEE
T ss_pred CCEEEEEECcchhhCCHHH-----HHHHHHHHHHHcCCCcEEEEEEE
Confidence 8999999999999986433 66899999999999999555553
No 20
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.66 E-value=1.7e-16 Score=164.96 Aligned_cols=199 Identities=17% Similarity=0.192 Sum_probs=131.8
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCC
Q 004164 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (771)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~ 127 (771)
.......+...+.. ..++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.++++....+ .+++++++|+.+
T Consensus 30 ~~~~~~~~l~~l~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 107 (257)
T 3f4k_A 30 SPEATRKAVSFINE--LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDN 107 (257)
T ss_dssp CHHHHHHHHTTSCC--CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred CHHHHHHHHHHHhc--CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhh
Confidence 34444445555532 25678999999999999999999865599999999999999888776544 349999999999
Q ss_pred CCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcchhhcchhhhhccCcEEEEeecCCCC
Q 004164 128 MQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIPQKS 207 (771)
Q Consensus 128 l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~~~~~l~~~~~~~w~~~~~~i~~~~ 207 (771)
+++++++||+|++.++++++ + ...+++++.++|+|||++++.+..-.. ..........|...++.+.+..
T Consensus 108 ~~~~~~~fD~v~~~~~l~~~-~-------~~~~l~~~~~~L~pgG~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 177 (257)
T 3f4k_A 108 LPFQNEELDLIWSEGAIYNI-G-------FERGMNEWSKYLKKGGFIAVSEASWFT--SERPAEIEDFWMDAYPEISVIP 177 (257)
T ss_dssp CSSCTTCEEEEEEESCSCCC-C-------HHHHHHHHHTTEEEEEEEEEEEEEESS--SCCCHHHHHHHHHHCTTCCBHH
T ss_pred CCCCCCCEEEEEecChHhhc-C-------HHHHHHHHHHHcCCCcEEEEEEeeccC--CCChHHHHHHHHHhCCCCCCHH
Confidence 99989999999999999998 3 358999999999999999998853100 0000111111211111111111
Q ss_pred CCCCCCcc--EEEEEEEcCCccccccccccccC------------cCcCCcchHHHHHHHHHHHHHHHHHcc
Q 004164 208 SSEPSLQT--FMVVADKENSSVVLQVTSSFDHS------------SLDCNKNQAFGIHEALESENQTRREYS 265 (771)
Q Consensus 208 ~~~~~l~~--f~~v~~k~~~~~~l~~~~~~~~y------------~~~~~~~~~~~~~~~~~~e~~~~~~~~ 265 (771)
.-...+.. |..+. ....+...|...| ..........++++.++.|++.++.|.
T Consensus 178 ~~~~~l~~aGf~~v~-----~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (257)
T 3f4k_A 178 TCIDKMERAGYTPTA-----HFILPENCWTEHYFAPQDEVRETFMKEHAGNKTAMDFMKGQQYERSLYSKYK 244 (257)
T ss_dssp HHHHHHHHTTEEEEE-----EEECCGGGTCCCCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCeEEE-----EEECChhhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 10011111 54444 2234555664443 112234556678888999999888885
No 21
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.63 E-value=1.2e-13 Score=163.90 Aligned_cols=118 Identities=17% Similarity=0.179 Sum_probs=84.5
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
...+||.+|+|+|.++..+.... ..+|++||+++.+++.|++.+ |+ .+++++++.+|+.+++....
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ngl-~~~~v~~i~~D~~~~l~~~~--------- 607 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGL-TGRAHRLIQADCLAWLREAN--------- 607 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTC-CSTTEEEEESCHHHHHHHCC---------
T ss_pred CCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCC-CccceEEEecCHHHHHHhcC---------
Confidence 34689999999999988877743 347999999999999999987 43 22589999999999987643
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCC-cCCcCcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMT-CPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s-~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
.+||+|++|.-.-..+..+. .....=.-.+++..+.++|+|||+|++-..++
T Consensus 608 -----------------------~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 608 -----------------------EQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp -----------------------CCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred -----------------------CCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 67999999763211000000 00000012467889999999999999766543
No 22
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.63 E-value=3.5e-15 Score=161.89 Aligned_cols=168 Identities=21% Similarity=0.346 Sum_probs=127.1
Q ss_pred chhHHHHHHHHhhhhhhhhhhhhccCCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcC-----CCC
Q 004164 515 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG-----FTQ 589 (771)
Q Consensus 515 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg-----~~~ 589 (771)
.+.||. |+..+++..+ +.+.+||+||+|+|.++..|..+.|..+|++||+||.++++|+++|. + .
T Consensus 103 e~~y~e-~L~~l~l~~~--------~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl-~ 172 (334)
T 1xj5_A 103 ECAYQE-MITHLPLCSI--------PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGY-E 172 (334)
T ss_dssp HHHHHH-HHHHHHHTTS--------SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG-G
T ss_pred chHHHH-HHHHHHHhhC--------CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc-C
Confidence 356776 5555655432 46689999999999999999998777899999999999999999983 2 4
Q ss_pred CCCeeEEEcchHHHHHhhccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccH
Q 004164 590 DKSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEG 669 (771)
Q Consensus 590 ~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~ 669 (771)
+++++++++|+.+++.... ..+||+|++|..... .++..++..
T Consensus 173 ~~rv~~~~~D~~~~l~~~~-------------------------------~~~fDlIi~d~~~p~------~~~~~l~~~ 215 (334)
T 1xj5_A 173 DPRVNLVIGDGVAFLKNAA-------------------------------EGSYDAVIVDSSDPI------GPAKELFEK 215 (334)
T ss_dssp STTEEEEESCHHHHHHTSC-------------------------------TTCEEEEEECCCCTT------SGGGGGGSH
T ss_pred CCcEEEEECCHHHHHHhcc-------------------------------CCCccEEEECCCCcc------CcchhhhHH
Confidence 6799999999999987643 257999999875331 145567789
Q ss_pred HHHHHHHHccCCCcEEEEEecc--CChhHHHHHHHHHHHhccceEE---eeecCC---ccEEEEEecC
Q 004164 670 SFLLTVKDALSEQGLFIVNLVS--RSQATKDMVISRMKMVFNHLFC---LQLEED---VNLVLFGLSS 729 (771)
Q Consensus 670 ~fl~~~~~~L~~~Gilv~Nl~~--~~~~~~~~v~~~l~~vF~~v~~---~~~~~~---~N~Vl~a~~~ 729 (771)
+||+.++++|+|||+|+++.-+ ........++.+++++|+.+.. ..++.. ....+||++.
T Consensus 216 ~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~~~~~vP~y~~g~~gf~~as~~ 283 (334)
T 1xj5_A 216 PFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGFMLCSTE 283 (334)
T ss_dssp HHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSSCEEEEEEECTTSGGGEEEEEEEECS
T ss_pred HHHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHHHHHhCccccceEEEeCCcccCCceEEEEcccC
Confidence 9999999999999999997422 3444556778999999995332 233332 2446677764
No 23
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.63 E-value=4.4e-15 Score=147.59 Aligned_cols=132 Identities=20% Similarity=0.348 Sum_probs=107.3
Q ss_pred CCCHhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHH
Q 004164 25 FTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVI 104 (771)
Q Consensus 25 f~~~~yWd~~y~~~~~~~~~ew~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i 104 (771)
|...+||+..|.... . . ..+.+.+.. .++.+|||+|||+|.++..+++.+. +|+++|+|+.++
T Consensus 5 ~~~~~~~~~~~~~~~---~------~----~~l~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~ 67 (199)
T 2xvm_A 5 IRDENYFTDKYELTR---T------H----SEVLEAVKV---VKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSI 67 (199)
T ss_dssp CCCTTHHHHHHTCCC---C------C----HHHHHHTTT---SCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHH
T ss_pred EechHHHhhhhcccc---c------c----HHHHHHhhc---cCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHH
Confidence 556789999886541 1 1 124455543 4677999999999999999999876 999999999999
Q ss_pred HHHHHHhhcCC-CCcEEEEeecCCCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 105 SDMLRRNVRDR-SDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 105 ~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
+.++++....+ +++++.++|+.++++ +++||+|++..+++++...+ ...+++++.++|+|||++++++.
T Consensus 68 ~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~~~~~~-----~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 68 ANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMFLEAKT-----IPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp HHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGGSCGGG-----HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhhCCHHH-----HHHHHHHHHHhcCCCeEEEEEEe
Confidence 98887765433 479999999999888 78999999999999986433 67999999999999999888764
No 24
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.60 E-value=3.9e-15 Score=156.23 Aligned_cols=107 Identities=17% Similarity=0.135 Sum_probs=92.3
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC---CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEec
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAG---FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDK 141 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g---~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~ 141 (771)
+++.+|||||||+|..+..|++.. ..+|+|+|+|+.||+.++++....+ .+++++++|+.+++++ +||+|++.
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~ 146 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLN 146 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceee
Confidence 478999999999999999998862 2389999999999999988875543 4799999999998864 69999999
Q ss_pred cccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 142 GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 142 ~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
.+++++...+ ...+|++++++|||||+|++.+..
T Consensus 147 ~~l~~~~~~~-----~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 147 FTLQFLEPSE-----RQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp SCGGGSCHHH-----HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred eeeeecCchh-----HhHHHHHHHHHcCCCcEEEEEecc
Confidence 9999986544 568999999999999999998764
No 25
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.59 E-value=4.9e-15 Score=149.85 Aligned_cols=142 Identities=18% Similarity=0.232 Sum_probs=111.1
Q ss_pred CHhhHHHHHhhcCCCCccccccch---hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHH
Q 004164 27 SKENWDKFFTIRGIGDSFEWYAEW---PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVV 103 (771)
Q Consensus 27 ~~~yWd~~y~~~~~~~~~ew~~~~---~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~ 103 (771)
+.++|++.|... +++.+...+ ..+...+...+.. .++.+|||+|||+|.++..+++.+. +|+++|+|+.+
T Consensus 13 ~~~~~~~~~~~~---~~w~~~~~~~~~~~~~~~l~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~ 85 (216)
T 3ofk_A 13 TYQSLERELAND---DPWRLDDNPFERERHTQLLRLSLSS---GAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRA 85 (216)
T ss_dssp HHHHHHHHHTSS---SGGGTTTCHHHHHHHHHHHHHHTTT---SSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHH
T ss_pred hHHHHHHHhcCC---CCcccccCHhHHHHHHHHHHHHccc---CCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHH
Confidence 567999998764 222222111 1233344445443 5678999999999999999999876 99999999999
Q ss_pred HHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 104 ISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 104 i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
++.++++... .++++++++|+.+++ ++++||+|++..+++++.+++ .+..++.++.++|+|||++++.+...
T Consensus 86 ~~~a~~~~~~-~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 86 IGRACQRTKR-WSHISWAATDILQFS-TAELFDLIVVAEVLYYLEDMT----QMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp HHHHHHHTTT-CSSEEEEECCTTTCC-CSCCEEEEEEESCGGGSSSHH----HHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred HHHHHHhccc-CCCeEEEEcchhhCC-CCCCccEEEEccHHHhCCCHH----HHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 9988777643 458999999999988 678999999999999998643 25688999999999999999987653
No 26
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.59 E-value=5.6e-15 Score=150.66 Aligned_cols=138 Identities=21% Similarity=0.374 Sum_probs=101.8
Q ss_pred HhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHH
Q 004164 28 KENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDM 107 (771)
Q Consensus 28 ~~yWd~~y~~~~~~~~~ew~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~ 107 (771)
.+||+.+|.... .....++. .+..++. ++.+|||+|||+|.++..++..+. +|+++|+|+.+++.+
T Consensus 3 ~~yw~~~~~~~~-~~~~~~~~-------~~~~~~~-----~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a 68 (235)
T 3sm3_A 3 ESYWEKVSGKNI-PSSLDLYP-------IIHNYLQ-----EDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLA 68 (235)
T ss_dssp ----------------CCCCT-------THHHHCC-----TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHH
T ss_pred hhHHHHHhhccC-CCHHHHHH-------HHHHhCC-----CCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHH
Confidence 579999887541 22222222 2555553 678999999999999999999977 999999999999988
Q ss_pred HHHhhcCCC------CcEEEEeecCCCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 108 LRRNVRDRS------DMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 108 ~~~~~~~~~------~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
+++....+. ++.+.++|+..+++++++||+|++..+++++.+++ ....+++++.++|+|||++++.++..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 69 ETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPDPK----ERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp HHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEESCGGGCCCHH----HHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred HHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEcchhhcCCCHH----HHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 877654432 58999999999999899999999999999987644 25589999999999999999999875
Q ss_pred ch
Q 004164 182 SH 183 (771)
Q Consensus 182 ~~ 183 (771)
.+
T Consensus 145 ~~ 146 (235)
T 3sm3_A 145 NW 146 (235)
T ss_dssp CT
T ss_pred ch
Confidence 44
No 27
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.59 E-value=4.4e-15 Score=155.42 Aligned_cols=112 Identities=17% Similarity=0.200 Sum_probs=95.3
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCC
Q 004164 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFM 131 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~ 131 (771)
.+.+.|..+.. ...+|||||||+|.++..|++.+. +|+|+|+|+.|++.+ ...+++.++++|+++++++
T Consensus 28 ~l~~~l~~~~~-----~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a-----~~~~~v~~~~~~~e~~~~~ 96 (257)
T 4hg2_A 28 ALFRWLGEVAP-----ARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQA-----LRHPRVTYAVAPAEDTGLP 96 (257)
T ss_dssp HHHHHHHHHSS-----CSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTC-----CCCTTEEEEECCTTCCCCC
T ss_pred HHHHHHHHhcC-----CCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhh-----hhcCCceeehhhhhhhccc
Confidence 45555666553 457999999999999999999876 999999999888754 2357899999999999999
Q ss_pred CCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcc
Q 004164 132 DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (771)
Q Consensus 132 ~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~ 182 (771)
+++||+|++..++|++. ..+++.+++|+|||||+|+++++...
T Consensus 97 ~~sfD~v~~~~~~h~~~--------~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 97 PASVDVAIAAQAMHWFD--------LDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp SSCEEEEEECSCCTTCC--------HHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred CCcccEEEEeeehhHhh--------HHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 99999999999998863 34899999999999999999988644
No 28
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.58 E-value=6.9e-15 Score=150.98 Aligned_cols=141 Identities=18% Similarity=0.268 Sum_probs=107.8
Q ss_pred CHhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHH
Q 004164 27 SKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISD 106 (771)
Q Consensus 27 ~~~yWd~~y~~~~~~~~~ew~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~ 106 (771)
..++|+++|.... ..|.... ....+..++.... .++.+|||+|||+|.++..|+..+. +|+++|+|+.+++.
T Consensus 32 ~~~~w~~~~~~~~----~~~~~~~--~~~~l~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~ 103 (235)
T 3lcc_A 32 EEGGWEKCWEEEI----TPWDQGR--ATPLIVHLVDTSS-LPLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAK 103 (235)
T ss_dssp HHHHHHHHHHTTC----CTTCCSS--CCHHHHHHHHTTC-SCCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHH
T ss_pred CHHHHHHHHhcCC----CCcccCC--CCHHHHHHHHhcC-CCCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHH
Confidence 4679999998652 2344221 1122333332211 2346999999999999999988766 89999999999999
Q ss_pred HHHHhhcC--CCCcEEEEeecCCCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 107 MLRRNVRD--RSDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 107 ~~~~~~~~--~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
++++.... ..+++++++|+.+++ ++++||+|++..+++++.... ...+++++.++|+|||++++.++..
T Consensus 104 a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 104 ANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCAIEPEM-----RPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp HHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTTSCGGG-----HHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred HHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhcCCHHH-----HHHHHHHHHHHCCCCcEEEEEEecc
Confidence 98877542 256999999999987 456999999999999986433 6799999999999999999988753
No 29
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.58 E-value=1e-14 Score=146.95 Aligned_cols=135 Identities=21% Similarity=0.245 Sum_probs=108.8
Q ss_pred HhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHH
Q 004164 28 KENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDM 107 (771)
Q Consensus 28 ~~yWd~~y~~~~~~~~~ew~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~ 107 (771)
..+|+..+... +...++.+...+.+.+.. .++ +|||+|||+|.++..+++.+..+|+++|+|+.+++.+
T Consensus 14 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~---~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a 82 (219)
T 3dlc_A 14 AKNMDEISKTL-------FAPIYPIIAENIINRFGI---TAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIA 82 (219)
T ss_dssp HHHHHHHHHTT-------TTTHHHHHHHHHHHHHCC---CEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHH
T ss_pred hhhHHHHHHHh-------hccccHHHHHHHHHhcCC---CCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHH
Confidence 45666666543 222355566667777654 344 9999999999999999987334999999999999999
Q ss_pred HHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 108 LRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 108 ~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+++....+ ++++++++|+.++++++++||+|++..+++++.+ ...++++++++|+|||++++.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~-------~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 83 LKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWED-------VATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp HHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGCSC-------HHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhhccC-------HHHHHHHHHHhCCCCCEEEEEecc
Confidence 88765544 4799999999999999999999999999999855 458999999999999999998754
No 30
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.58 E-value=3.3e-15 Score=154.13 Aligned_cols=108 Identities=16% Similarity=0.172 Sum_probs=94.9
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcC-CCCcEEEEeecCCCCCCCCCccEEEecccccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~-~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~ 146 (771)
++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.++++.... ..++.++++|+.++++++++||+|++..++++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhh
Confidence 57899999999999999998887669999999999999988776544 34689999999999888889999999999999
Q ss_pred ccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 147 l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+.++. +..+++++.++|+|||++++.+..
T Consensus 159 ~~~~~-----~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 159 LTDQH-----LAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp SCHHH-----HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCHHH-----HHHHHHHHHHhcCCCeEEEEEEcc
Confidence 86543 568999999999999999998764
No 31
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.57 E-value=1.3e-14 Score=154.21 Aligned_cols=107 Identities=15% Similarity=0.175 Sum_probs=95.4
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEeccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGG 143 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~ 143 (771)
.++.+|||+|||+|.++..+++. +. +|+++|+|+.+++.++++....+ ++++++++|+.++++++++||+|++..+
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 159 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDA 159 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecch
Confidence 57889999999999999999987 66 99999999999998887765433 5799999999999999999999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
++++.+. ..++++++++|||||++++.+...
T Consensus 160 l~~~~~~-------~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 160 FLHSPDK-------LKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp GGGCSCH-------HHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred hhhcCCH-------HHHHHHHHHHcCCCeEEEEEEecc
Confidence 9998763 499999999999999999998653
No 32
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.56 E-value=2.2e-14 Score=148.73 Aligned_cols=113 Identities=16% Similarity=0.245 Sum_probs=98.3
Q ss_pred HHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCc
Q 004164 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETF 135 (771)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sF 135 (771)
.+..++.. .++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.++++.. ..++.++++|+.++++++++|
T Consensus 35 ~l~~~~~~---~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~~~f 109 (253)
T 3g5l_A 35 ELKKMLPD---FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIEDIAIEPDAY 109 (253)
T ss_dssp HHHTTCCC---CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC--CTTEEEEECCGGGCCCCTTCE
T ss_pred HHHHhhhc---cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc--cCCeEEEEcchhhCCCCCCCe
Confidence 34444443 5789999999999999999999987799999999999998877764 568999999999999988999
Q ss_pred cEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 136 DVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 136 DlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
|+|++..+++++.+ ...++++++++|||||++++....
T Consensus 110 D~v~~~~~l~~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 110 NVVLSSLALHYIAS-------FDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp EEEEEESCGGGCSC-------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEEchhhhhhhh-------HHHHHHHHHHHcCCCcEEEEEeCC
Confidence 99999999999855 459999999999999999998755
No 33
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.56 E-value=4.1e-15 Score=155.94 Aligned_cols=151 Identities=14% Similarity=0.130 Sum_probs=106.1
Q ss_pred CCCCHhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHH
Q 004164 24 DFTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVV 103 (771)
Q Consensus 24 ~f~~~~yWd~~y~~~~~~~~~ew~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~ 103 (771)
.|....||+.+|.... . .+.-.....-+...+.+++.. ...++.+|||||||+|.++..++..++.+|+|+|+|+.|
T Consensus 14 ~~~~~~~~~~~y~~~~-~-~~~~~~~~~~~~~~~~~~~~~-~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~ 90 (263)
T 2a14_A 14 HFLPRDYLATYYSFDG-S-PSPEAEMLKFNLECLHKTFGP-GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRN 90 (263)
T ss_dssp HCCHHHHHHHHCCCCC-S-CCHHHHHHHHHHHHHHHHHST-TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHH
T ss_pred ccCHHHHHHHhcCCCc-c-cchhhHHHHHHHHHHHHHhcC-CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHH
Confidence 3777899999997552 1 110000111222344455432 224678999999999999888777787789999999999
Q ss_pred HHHHHHHhhcCC------------------------------CCcE-EEEeecCCC-CC---CCCCccEEEecccccccc
Q 004164 104 ISDMLRRNVRDR------------------------------SDMR-WRVMDMTSM-QF---MDETFDVILDKGGLDALM 148 (771)
Q Consensus 104 i~~~~~~~~~~~------------------------------~~i~-~~~~D~~~l-~~---~~~sFDlVi~~~~l~~l~ 148 (771)
++.+++++.... .++. ++++|+.+. ++ ..++||+|++..+|+++.
T Consensus 91 l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~ 170 (263)
T 2a14_A 91 REELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECAC 170 (263)
T ss_dssp HHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHC
T ss_pred HHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhc
Confidence 998876553321 1133 889999884 43 357999999999999864
Q ss_pred CcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 149 EPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 149 ~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
... .....++++++++|||||+|++.+..
T Consensus 171 ~~~---~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 171 CSL---DAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp SSH---HHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred CCH---HHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 321 12678999999999999999998743
No 34
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.56 E-value=1.7e-14 Score=150.35 Aligned_cols=113 Identities=16% Similarity=0.264 Sum_probs=97.7
Q ss_pred HHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCCCCc
Q 004164 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMDETF 135 (771)
Q Consensus 57 l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~sF 135 (771)
+...+.. .++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++....+ +++.+.++|+.++++++++|
T Consensus 29 l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~f 104 (260)
T 1vl5_A 29 LMQIAAL---KGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERF 104 (260)
T ss_dssp HHHHHTC---CSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCE
T ss_pred HHHHhCC---CCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCE
Confidence 4555543 5788999999999999999998876 99999999999999887765544 57999999999999999999
Q ss_pred cEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 136 DVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 136 DlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
|+|++..+++++.+. ..++.+++++|||||++++.+..
T Consensus 105 D~V~~~~~l~~~~d~-------~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 105 HIVTCRIAAHHFPNP-------ASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp EEEEEESCGGGCSCH-------HHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEEEhhhhHhcCCH-------HHHHHHHHHHcCCCCEEEEEEcC
Confidence 999999999999764 48999999999999999998654
No 35
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.56 E-value=1.2e-14 Score=154.08 Aligned_cols=157 Identities=15% Similarity=0.222 Sum_probs=118.2
Q ss_pred hhhhhhccCCCCHhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEE
Q 004164 16 TDLLQTLGDFTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGIT 95 (771)
Q Consensus 16 ~~lP~~~~~f~~~~yWd~~y~~~~~~~~~ew~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~ 95 (771)
..+|..+.+-...++|+.++... ...+..+...+...+.. .++.+|||||||+|.++..|++.+. +|+
T Consensus 16 ~~~~~~y~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~ 83 (293)
T 3thr_A 16 EGIPDQYADGEAARVWQLYIGDT--------RSRTAEYKAWLLGLLRQ---HGCHRVLDVACGTGVDSIMLVEEGF-SVT 83 (293)
T ss_dssp TTSCCTTTTCHHHHHHHHHHTCC--------SCBCHHHHHHHHHHHHH---TTCCEEEETTCTTSHHHHHHHHTTC-EEE
T ss_pred ccChhhhcCchHHHHHHHHHhcC--------cchHHHHHHHHHHHhcc---cCCCEEEEecCCCCHHHHHHHHCCC-eEE
Confidence 33555443333456888877432 22344555667777654 4678999999999999999999988 999
Q ss_pred EEcCCHHHHHHHHHHhhcCC-----CCcEEEEeecCCCC---CCCCCccEEEec-cccccccCcccchHHHHHHHHHHHH
Q 004164 96 NVDFSKVVISDMLRRNVRDR-----SDMRWRVMDMTSMQ---FMDETFDVILDK-GGLDALMEPELGHKLGNQYLSEVKR 166 (771)
Q Consensus 96 ~vDiS~~~i~~~~~~~~~~~-----~~i~~~~~D~~~l~---~~~~sFDlVi~~-~~l~~l~~~~~~~~~~~~~l~~i~r 166 (771)
|+|+|+.+++.++++..... .++.+..+|+.+++ +++++||+|++. .+++++.+..........+++++++
T Consensus 84 gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~ 163 (293)
T 3thr_A 84 SVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIAS 163 (293)
T ss_dssp EEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHH
Confidence 99999999998877653222 46889999999887 788999999998 7999988721112236799999999
Q ss_pred ccccCeEEEEEEcCcchh
Q 004164 167 LLKSGGKFVCLTLAESHV 184 (771)
Q Consensus 167 vLkpGG~~ii~~~~~~~~ 184 (771)
+|||||++++.....+.+
T Consensus 164 ~LkpgG~l~~~~~~~~~~ 181 (293)
T 3thr_A 164 MVRPGGLLVIDHRNYDYI 181 (293)
T ss_dssp TEEEEEEEEEEEECHHHH
T ss_pred HcCCCeEEEEEeCCHHHH
Confidence 999999999988764443
No 36
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.56 E-value=1.9e-14 Score=145.84 Aligned_cols=104 Identities=20% Similarity=0.243 Sum_probs=92.3
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEecccccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~ 146 (771)
.++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++.. .+++++++|+.+++++ ++||+|++..++++
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~---~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~ 118 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP---KEFSITEGDFLSFEVP-TSIDTIVSTYAFHH 118 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC---TTCCEESCCSSSCCCC-SCCSEEEEESCGGG
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC---CceEEEeCChhhcCCC-CCeEEEEECcchhc
Confidence 3678999999999999999999876 99999999999998877653 5799999999999887 99999999999999
Q ss_pred ccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 147 l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+.+++ ...+++++.++|||||++++.+..
T Consensus 119 ~~~~~-----~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 119 LTDDE-----KNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp SCHHH-----HHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred CChHH-----HHHHHHHHHHhcCCCCEEEEEecc
Confidence 87654 345999999999999999998754
No 37
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.55 E-value=6.5e-15 Score=152.50 Aligned_cols=107 Identities=13% Similarity=0.155 Sum_probs=94.9
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEecccccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~ 146 (771)
.++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.++++.... .+++++++|+.++++++++||+|++..++++
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 170 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-PVGKFILASMETATLPPNTYDLIVIQWTAIY 170 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGGGCCCCSSCEEEEEEESCGGG
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHHHCCCCCCCeEEEEEcchhhh
Confidence 578899999999999999999887668999999999999887776443 6799999999999988899999999999999
Q ss_pred ccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 147 l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
+.+.+ ...++++++++|||||++++.+.
T Consensus 171 ~~~~~-----~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 171 LTDAD-----FVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp SCHHH-----HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHH-----HHHHHHHHHHhcCCCeEEEEEec
Confidence 85433 67999999999999999999875
No 38
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.55 E-value=8.3e-15 Score=150.51 Aligned_cols=104 Identities=18% Similarity=0.228 Sum_probs=91.8
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEeccccccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDAL 147 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l 147 (771)
++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++... +++++++|+.++ +++++||+|++.++++++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~---~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~ 116 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD---GITYIHSRFEDA-QLPRRYDNIVLTHVLEHI 116 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS---CEEEEESCGGGC-CCSSCEEEEEEESCGGGC
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC---CeEEEEccHHHc-CcCCcccEEEEhhHHHhh
Confidence 567999999999999999998877 899999999999988777633 799999999988 467899999999999999
Q ss_pred cCcccchHHHHHHHHHHH-HccccCeEEEEEEcCcch
Q 004164 148 MEPELGHKLGNQYLSEVK-RLLKSGGKFVCLTLAESH 183 (771)
Q Consensus 148 ~~~~~~~~~~~~~l~~i~-rvLkpGG~~ii~~~~~~~ 183 (771)
.++ ..++++++ ++|||||++++.+.....
T Consensus 117 ~~~-------~~~l~~~~~~~LkpgG~l~i~~~~~~~ 146 (250)
T 2p7i_A 117 DDP-------VALLKRINDDWLAEGGRLFLVCPNANA 146 (250)
T ss_dssp SSH-------HHHHHHHHHTTEEEEEEEEEEEECTTC
T ss_pred cCH-------HHHHHHHHHHhcCCCCEEEEEcCChHH
Confidence 764 48999999 999999999998876443
No 39
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.55 E-value=9.3e-15 Score=146.30 Aligned_cols=115 Identities=15% Similarity=0.146 Sum_probs=98.8
Q ss_pred HHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCC
Q 004164 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDE 133 (771)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~ 133 (771)
...+..++.. .+.+|||+|||+|.++..|++.+. +|+++|+|+.+++.++++ .+++.++++|+.+++++++
T Consensus 31 ~~~l~~~~~~----~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~----~~~~~~~~~d~~~~~~~~~ 101 (203)
T 3h2b_A 31 RVLIEPWATG----VDGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQT----HPSVTFHHGTITDLSDSPK 101 (203)
T ss_dssp HHHHHHHHHH----CCSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHH----CTTSEEECCCGGGGGGSCC
T ss_pred HHHHHHHhcc----CCCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHh----CCCCeEEeCcccccccCCC
Confidence 4445566543 478999999999999999999977 999999999999988665 3589999999999998889
Q ss_pred CccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcc
Q 004164 134 TFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (771)
Q Consensus 134 sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~ 182 (771)
+||+|++..+++++...+ ...+++++.++|+|||++++..+..+
T Consensus 102 ~fD~v~~~~~l~~~~~~~-----~~~~l~~~~~~L~pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 102 RWAGLLAWYSLIHMGPGE-----LPDALVALRMAVEDGGGLLMSFFSGP 145 (203)
T ss_dssp CEEEEEEESSSTTCCTTT-----HHHHHHHHHHTEEEEEEEEEEEECCS
T ss_pred CeEEEEehhhHhcCCHHH-----HHHHHHHHHHHcCCCcEEEEEEccCC
Confidence 999999999999987444 67999999999999999999886543
No 40
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.55 E-value=1.9e-14 Score=153.46 Aligned_cols=118 Identities=12% Similarity=0.202 Sum_probs=100.7
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHh--cCCCeEEEEcCCHHHHHHHHHHhhcC---CCCcEEEEeecC
Q 004164 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYD--AGFHGITNVDFSKVVISDMLRRNVRD---RSDMRWRVMDMT 126 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~--~g~~~V~~vDiS~~~i~~~~~~~~~~---~~~i~~~~~D~~ 126 (771)
.+...+..+.. .++.+|||+|||+|.++..|++ .+..+|+|+|+|+.+++.++++.... .++++++++|+.
T Consensus 24 ~~~~~l~~~~~----~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 99 (299)
T 3g5t_A 24 DFYKMIDEYHD----GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSD 99 (299)
T ss_dssp HHHHHHHHHCC----SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTT
T ss_pred HHHHHHHHHhc----CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHH
Confidence 45555666654 3789999999999999999996 34569999999999999998877655 578999999999
Q ss_pred CCCCCC------CCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 127 SMQFMD------ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 127 ~l~~~~------~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
++++++ ++||+|++..+++++ + ...+++++.++|+|||++++.++..
T Consensus 100 ~~~~~~~~~~~~~~fD~V~~~~~l~~~-~-------~~~~l~~~~~~LkpgG~l~i~~~~~ 152 (299)
T 3g5t_A 100 DFKFLGADSVDKQKIDMITAVECAHWF-D-------FEKFQRSAYANLRKDGTIAIWGYAD 152 (299)
T ss_dssp CCGGGCTTTTTSSCEEEEEEESCGGGS-C-------HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred hCCccccccccCCCeeEEeHhhHHHHh-C-------HHHHHHHHHHhcCCCcEEEEEecCC
Confidence 998877 899999999999998 4 4599999999999999999976654
No 41
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.55 E-value=1.7e-14 Score=148.14 Aligned_cols=115 Identities=27% Similarity=0.414 Sum_probs=99.1
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCC
Q 004164 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFM 131 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~ 131 (771)
.+...+..++. ++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++. ...+++++++|+.+++++
T Consensus 42 ~~~~~l~~~~~-----~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~d~~~~~~~ 113 (242)
T 3l8d_A 42 TIIPFFEQYVK-----KEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERG--EGPDLSFIKGDLSSLPFE 113 (242)
T ss_dssp THHHHHHHHSC-----TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTT--CBTTEEEEECBTTBCSSC
T ss_pred HHHHHHHHHcC-----CCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhc--ccCCceEEEcchhcCCCC
Confidence 44555666653 678999999999999999999977 9999999999999876654 346899999999999998
Q ss_pred CCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 132 DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 132 ~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
+++||+|++..+++++.+. ..++++++++|+|||++++.+...
T Consensus 114 ~~~fD~v~~~~~l~~~~~~-------~~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 114 NEQFEAIMAINSLEWTEEP-------LRALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp TTCEEEEEEESCTTSSSCH-------HHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CCCccEEEEcChHhhccCH-------HHHHHHHHHHhCCCeEEEEEEcCC
Confidence 9999999999999998653 489999999999999999998653
No 42
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.54 E-value=9.5e-15 Score=146.13 Aligned_cols=136 Identities=20% Similarity=0.274 Sum_probs=102.7
Q ss_pred hHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHH
Q 004164 30 NWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLR 109 (771)
Q Consensus 30 yWd~~y~~~~~~~~~ew~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~ 109 (771)
||+++|... ...|..........+...+ .++ +|||+|||+|.++..+++.+. +|+++|+|+.+++.+++
T Consensus 1 ~W~~~y~~~----~~~~~~~~~~~l~~~~~~~-----~~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~ 69 (202)
T 2kw5_A 1 MWDERFSQS----EYVYGTEPNDFLVSVANQI-----PQG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQ 69 (202)
T ss_dssp CCCCCCCCC----CCCCCCCCCSSHHHHHHHS-----CSS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHH
T ss_pred Chhhhhccc----chhhccCchHHHHHHHHhC-----CCC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHH
Confidence 577777643 1223333223322333333 245 999999999999999999877 99999999999999988
Q ss_pred HhhcCCCCcEEEEeecCCCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcch
Q 004164 110 RNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (771)
Q Consensus 110 ~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~ 183 (771)
+....+.++.+.++|+.++++++++||+|++. +.++... ....++.++.++|+|||++++.++....
T Consensus 70 ~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~--~~~~~~~-----~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 70 LAQEKGVKITTVQSNLADFDIVADAWEGIVSI--FCHLPSS-----LRQQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp HHHHHTCCEEEECCBTTTBSCCTTTCSEEEEE--CCCCCHH-----HHHHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred HHHhcCCceEEEEcChhhcCCCcCCccEEEEE--hhcCCHH-----HHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 77655568999999999998888999999984 3333211 2679999999999999999999876443
No 43
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.53 E-value=3.3e-14 Score=147.87 Aligned_cols=117 Identities=15% Similarity=0.243 Sum_probs=99.1
Q ss_pred HHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCcc
Q 004164 58 ISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFD 136 (771)
Q Consensus 58 ~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFD 136 (771)
..++......++.+|||+|||+|.++..+++. +. +|+++|+|+.+++.++++.... ++++++++|+.++++++++||
T Consensus 45 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~fD 122 (266)
T 3ujc_A 45 KKILSDIELNENSKVLDIGSGLGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGN-NKIIFEANDILTKEFPENNFD 122 (266)
T ss_dssp HHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSC-TTEEEEECCTTTCCCCTTCEE
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcC-CCeEEEECccccCCCCCCcEE
Confidence 33333333467889999999999999999987 65 9999999999999887766444 789999999999999899999
Q ss_pred EEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 137 VILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 137 lVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
+|++..+++++...+ ...++++++++|||||++++.++..
T Consensus 123 ~v~~~~~l~~~~~~~-----~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 123 LIYSRDAILALSLEN-----KNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp EEEEESCGGGSCHHH-----HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEeHHHHHHhcChHH-----HHHHHHHHHHHcCCCCEEEEEEecc
Confidence 999999999984333 6699999999999999999998753
No 44
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.53 E-value=4.8e-14 Score=147.80 Aligned_cols=107 Identities=20% Similarity=0.341 Sum_probs=94.8
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEecccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~l 144 (771)
.++.+|||+|||+|.++..+++....+|+++|+|+.+++.++++....+ .++++.++|+.++++++++||+|++..++
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 139 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESL 139 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechh
Confidence 5788999999999999999988633499999999999998887765544 46999999999999999999999999999
Q ss_pred ccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+++.+. ..+++++.++|||||++++.++.
T Consensus 140 ~~~~~~-------~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 140 HHMPDR-------GRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp TTSSCH-------HHHHHHHHTTEEEEEEEEEEEEE
T ss_pred hhCCCH-------HHHHHHHHHHcCCCeEEEEEEee
Confidence 998764 49999999999999999998865
No 45
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.53 E-value=7.7e-14 Score=142.81 Aligned_cols=123 Identities=20% Similarity=0.300 Sum_probs=101.5
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcC-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCC
Q 004164 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM 128 (771)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g-~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l 128 (771)
+......+..++.. ..++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.++++.... .++.++++|+.++
T Consensus 28 ~~~~~~~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~ 104 (234)
T 3dtn_A 28 FDDFYGVSVSIASV--DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN-LKVKYIEADYSKY 104 (234)
T ss_dssp HHHHHHHHHHTCCC--SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC-TTEEEEESCTTTC
T ss_pred HHHHHHHHHHHhhc--CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC-CCEEEEeCchhcc
Confidence 34444556666642 2467899999999999999999883 359999999999999887776443 3899999999999
Q ss_pred CCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 129 QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 129 ~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
+++ ++||+|++..+++++.+++ ...++++++++|||||++++.+...
T Consensus 105 ~~~-~~fD~v~~~~~l~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 105 DFE-EKYDMVVSALSIHHLEDED-----KKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp CCC-SCEEEEEEESCGGGSCHHH-----HHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred CCC-CCceEEEEeCccccCCHHH-----HHHHHHHHHHhcCCCcEEEEEEecC
Confidence 887 8999999999999986543 4579999999999999999998664
No 46
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.52 E-value=1.7e-13 Score=135.21 Aligned_cols=105 Identities=25% Similarity=0.388 Sum_probs=90.0
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEec-cccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDK-GGLD 145 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~-~~l~ 145 (771)
.++.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++. +++.++++|+.++++++++||+|++. .+++
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~ 119 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDF----PEARWVVGDLSVDQISETDFDLIVSAGNVMG 119 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC----TTSEEEECCTTTSCCCCCCEEEEEECCCCGG
T ss_pred cCCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhC----CCCcEEEcccccCCCCCCceeEEEECCcHHh
Confidence 3678999999999999999999876 9999999999999886654 46999999999988888899999998 5677
Q ss_pred cccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 146 ~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
++.... ...++.++.++|+|||++++.....
T Consensus 120 ~~~~~~-----~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 120 FLAEDG-----REPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp GSCHHH-----HHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred hcChHH-----HHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 764322 5799999999999999999877653
No 47
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.52 E-value=6.8e-14 Score=145.10 Aligned_cols=119 Identities=17% Similarity=0.063 Sum_probs=100.2
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCC
Q 004164 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (771)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~ 127 (771)
+......+...+.. .++.+|||+|||+|.++..+++....+|+++|+|+.+++.++++....+ .++++.++|+.+
T Consensus 21 ~~~~~~~l~~~~~~---~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~ 97 (256)
T 1nkv_A 21 TEEKYATLGRVLRM---KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG 97 (256)
T ss_dssp CHHHHHHHHHHTCC---CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT
T ss_pred CHHHHHHHHHhcCC---CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh
Confidence 44455556666654 6788999999999999999998733389999999999999988775544 479999999999
Q ss_pred CCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 128 MQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 128 l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
+++ +++||+|++.++++++.+.. .++++++++|||||++++.+.
T Consensus 98 ~~~-~~~fD~V~~~~~~~~~~~~~-------~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 98 YVA-NEKCDVAACVGATWIAGGFA-------GAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp CCC-SSCEEEEEEESCGGGTSSSH-------HHHHHHTTSEEEEEEEEEEEE
T ss_pred CCc-CCCCCEEEECCChHhcCCHH-------HHHHHHHHHcCCCeEEEEecC
Confidence 987 78999999999999987644 899999999999999999874
No 48
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.52 E-value=2.1e-13 Score=138.23 Aligned_cols=119 Identities=15% Similarity=0.135 Sum_probs=97.6
Q ss_pred HHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCC-CeEEEEcCCHHHHHHHHHHhhcCC------CCcEEEEeecC
Q 004164 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR------SDMRWRVMDMT 126 (771)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~-~~V~~vDiS~~~i~~~~~~~~~~~------~~i~~~~~D~~ 126 (771)
...+.+++.. .++.+|||+|||+|.++..+++.+. .+|+++|+|+.+++.++++....+ ++++++++|+.
T Consensus 18 ~~~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (219)
T 3jwg_A 18 LGTVVAVLKS---VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLV 94 (219)
T ss_dssp HHHHHHHHHH---TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSS
T ss_pred HHHHHHHHhh---cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccc
Confidence 3445555543 4678999999999999999998753 699999999999999988764332 27999999998
Q ss_pred CCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 127 SMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 127 ~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
..++++++||+|++..+++++.+++ ...+++++.++|||||.+++....
T Consensus 95 ~~~~~~~~fD~V~~~~~l~~~~~~~-----~~~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 95 YRDKRFSGYDAATVIEVIEHLDENR-----LQAFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp SCCGGGTTCSEEEEESCGGGCCHHH-----HHHHHHHHHTTTCCSEEEEEEEBG
T ss_pred ccccccCCCCEEEEHHHHHhCCHHH-----HHHHHHHHHHhhCCCEEEEEccch
Confidence 8888889999999999999986543 569999999999999977665543
No 49
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.52 E-value=5.2e-14 Score=145.22 Aligned_cols=146 Identities=14% Similarity=0.182 Sum_probs=107.0
Q ss_pred CHhhHHHHHhhcC-CCCccccccc-hhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHH
Q 004164 27 SKENWDKFFTIRG-IGDSFEWYAE-WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVI 104 (771)
Q Consensus 27 ~~~yWd~~y~~~~-~~~~~ew~~~-~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i 104 (771)
..++|+++|.... .....-|... .......+..++.. ..++.+|||+|||+|.++..|++.+. +|+++|+|+.++
T Consensus 15 ~~~~w~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~ 91 (245)
T 3ggd_A 15 VADAWEQYWNKTLVNSTPVLWDANVERAVVVDLPRFELL--FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSAL 91 (245)
T ss_dssp HHHHHHHHHHHHHHHTCCCTTCCCGGGTHHHHHHHHTTT--SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHH
T ss_pred hHHHHHHHHHhcccCCccceecchhHHHHHHHHHHHhhc--cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHH
Confidence 3556666665431 0111223322 22223334444432 24678999999999999999999887 899999999999
Q ss_pred HHHHHHhhcCCCCcEEEEeecCCCCCCC-----CCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 105 SDMLRRNVRDRSDMRWRVMDMTSMQFMD-----ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 105 ~~~~~~~~~~~~~i~~~~~D~~~l~~~~-----~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
+.++++. ...+++++++|+.++++.. ..||+|++..+++++...+ ...+++++.++|||||++++.++
T Consensus 92 ~~a~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~-----~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 92 EIAAKEN--TAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIPVEK-----RELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp HHHHHHS--CCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSSTTSCGGG-----HHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHHhC--cccCceEEECcccccccccccccccCccEEEEcchhhcCCHHH-----HHHHHHHHHHHcCCCCEEEEEeC
Confidence 9887766 3358999999999875332 3599999999999986444 67999999999999999999987
Q ss_pred Ccc
Q 004164 180 AES 182 (771)
Q Consensus 180 ~~~ 182 (771)
..+
T Consensus 165 ~~~ 167 (245)
T 3ggd_A 165 GTG 167 (245)
T ss_dssp CTT
T ss_pred Ccc
Confidence 644
No 50
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.52 E-value=3.2e-14 Score=146.59 Aligned_cols=134 Identities=15% Similarity=0.083 Sum_probs=104.4
Q ss_pred CHhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHH
Q 004164 27 SKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISD 106 (771)
Q Consensus 27 ~~~yWd~~y~~~~~~~~~ew~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~ 106 (771)
..+||..+.... ......+...+..++.. ..++.+|||||||+|.++..+++.+. +|+++|+|+.+++.
T Consensus 10 ~~~~y~~~~~~~--------~~~~~~~~~~~~~~l~~--~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~ 78 (240)
T 3dli_A 10 TSDYYFLFEEKF--------RGSRELVKARLRRYIPY--FKGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKF 78 (240)
T ss_dssp --CHHHHHHHHH--------TCCHHHHHHHHGGGGGG--TTTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHH
T ss_pred hHHHHHHHHHHh--------CCCHHHHHHHHHHHHhh--hcCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHH
Confidence 345666654432 23344555555555543 14678999999999999999999877 89999999999987
Q ss_pred HHHHhhcCCCCcEEEEeecCCC--CCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcch
Q 004164 107 MLRRNVRDRSDMRWRVMDMTSM--QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (771)
Q Consensus 107 ~~~~~~~~~~~i~~~~~D~~~l--~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~ 183 (771)
++++ +.++++|+.+. ++++++||+|++..+++++..++ ...+++++.++|||||++++.+.....
T Consensus 79 a~~~-------~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~~~ 145 (240)
T 3dli_A 79 CEGK-------FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPER-----LFELLSLCYSKMKYSSYIVIESPNPTS 145 (240)
T ss_dssp HHTT-------SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGGG-----HHHHHHHHHHHBCTTCCEEEEEECTTS
T ss_pred HHhh-------cceeeccHHHHhhhcCCCCeeEEEECCchhhCCcHH-----HHHHHHHHHHHcCCCcEEEEEeCCcch
Confidence 6543 88999999886 78889999999999999997554 679999999999999999998876443
No 51
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.51 E-value=8e-14 Score=143.68 Aligned_cols=116 Identities=18% Similarity=0.237 Sum_probs=99.8
Q ss_pred HHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCCC
Q 004164 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMDE 133 (771)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~ 133 (771)
..+...+.. .++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++....+ +++.+.++|+.+++++++
T Consensus 11 ~~~~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 86 (239)
T 1xxl_A 11 GLMIKTAEC---RAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDD 86 (239)
T ss_dssp HHHHHHHTC---CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTT
T ss_pred chHHHHhCc---CCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCC
Confidence 345555554 6789999999999999999998876 99999999999998877765443 579999999999999999
Q ss_pred CccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 134 TFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 134 sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
+||+|++..+++++.+. ..++.++.++|||||++++.+...
T Consensus 87 ~fD~v~~~~~l~~~~~~-------~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 87 SFDIITCRYAAHHFSDV-------RKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp CEEEEEEESCGGGCSCH-------HHHHHHHHHHEEEEEEEEEEEECB
T ss_pred cEEEEEECCchhhccCH-------HHHHHHHHHHcCCCcEEEEEEcCC
Confidence 99999999999998753 489999999999999999987653
No 52
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.51 E-value=6.8e-14 Score=141.06 Aligned_cols=114 Identities=16% Similarity=0.218 Sum_probs=96.6
Q ss_pred HHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCc
Q 004164 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETF 135 (771)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sF 135 (771)
.+...+.. ..++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.+++ ...++++++++|+.++ +++++|
T Consensus 36 ~~~~~l~~--~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~---~~~~~~~~~~~d~~~~-~~~~~~ 108 (218)
T 3ou2_A 36 AALERLRA--GNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR---HGLDNVEFRQQDLFDW-TPDRQW 108 (218)
T ss_dssp HHHHHHTT--TTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG---GCCTTEEEEECCTTSC-CCSSCE
T ss_pred HHHHHHhc--CCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh---cCCCCeEEEecccccC-CCCCce
Confidence 45555542 14667999999999999999999876 99999999999987755 2236899999999998 778999
Q ss_pred cEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 136 DVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 136 DlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
|+|++..+++++.++. ...+++++.++|+|||++++.+...
T Consensus 109 D~v~~~~~l~~~~~~~-----~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 109 DAVFFAHWLAHVPDDR-----FEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp EEEEEESCGGGSCHHH-----HHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred eEEEEechhhcCCHHH-----HHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 9999999999987643 5699999999999999999998764
No 53
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.51 E-value=3e-14 Score=148.27 Aligned_cols=149 Identities=16% Similarity=0.180 Sum_probs=107.2
Q ss_pred CCCCHhhHHHHHhhcCCCCcc--ccccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCH
Q 004164 24 DFTSKENWDKFFTIRGIGDSF--EWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSK 101 (771)
Q Consensus 24 ~f~~~~yWd~~y~~~~~~~~~--ew~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~ 101 (771)
.|....||+.+|.... ..+ .++..+ ....+..++.. ...++.+|||+|||+|.++..++..+..+|+++|+|+
T Consensus 15 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~l~~~~~~-~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~ 89 (265)
T 2i62_A 15 HFNPRDYLEKYYSFGS--RHCAENEILRH--LLKNLFKIFCL-GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTD 89 (265)
T ss_dssp HCCHHHHHHHHHCCCS--SCHHHHHHHHH--HHHHHHHHHHS-SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCH
T ss_pred hcCHHHHHHHHhCcCC--cchhHHHHHHh--hHHHHHHHhcc-cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCH
Confidence 3667889999997542 111 111111 11223333332 2246789999999999999999888766899999999
Q ss_pred HHHHHHHHHhhcCCC------------------------------Cc-EEEEeecCCCC-CCC---CCccEEEecccccc
Q 004164 102 VVISDMLRRNVRDRS------------------------------DM-RWRVMDMTSMQ-FMD---ETFDVILDKGGLDA 146 (771)
Q Consensus 102 ~~i~~~~~~~~~~~~------------------------------~i-~~~~~D~~~l~-~~~---~sFDlVi~~~~l~~ 146 (771)
.+++.++++...... ++ .+.++|+.+.+ +++ ++||+|++..++++
T Consensus 90 ~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~ 169 (265)
T 2i62_A 90 QNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDA 169 (265)
T ss_dssp HHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHH
T ss_pred HHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhh
Confidence 999988777643211 17 89999999864 355 89999999999996
Q ss_pred ccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 147 l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+.... .....+++++.++|||||++++.+..
T Consensus 170 ~~~~~---~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 170 ACPDL---PAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HCSSH---HHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hcCCh---HHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 65431 12679999999999999999998743
No 54
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.50 E-value=7.3e-14 Score=140.16 Aligned_cols=110 Identities=16% Similarity=0.269 Sum_probs=93.5
Q ss_pred CCCCeEEEEcCCcchhH-HHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEeccccc
Q 004164 67 SPPPQILVPGCGNSRLS-EHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls-~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~ 145 (771)
.++.+|||+|||+|.++ ..++..+. +|+++|+|+.+++.++++....+.++.+.++|+.++++++++||+|++.++++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIF 100 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHH
Confidence 36789999999999984 45555566 99999999999999888776556789999999999998889999999999999
Q ss_pred cccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcc
Q 004164 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (771)
Q Consensus 146 ~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~ 182 (771)
++...+ ...++++++++|+|||++++.++..+
T Consensus 101 ~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 101 HMRKND-----VKEAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp GSCHHH-----HHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred hCCHHH-----HHHHHHHHHHHcCCCcEEEEEEeccc
Confidence 874222 67999999999999999999987643
No 55
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.50 E-value=5.5e-14 Score=141.52 Aligned_cols=102 Identities=25% Similarity=0.355 Sum_probs=90.4
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEeccccccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDAL 147 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l 147 (771)
++.+|||+|||+|.++..+ +..+++++|+|+.+++.++++. +++.++++|+.++++++++||+|++..+++++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 108 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA----PEATWVRAWGEALPFPGESFDVVLLFTTLEFV 108 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC----TTSEEECCCTTSCCSCSSCEEEEEEESCTTTC
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcccccCCCCCCcEEEEEEcChhhhc
Confidence 6789999999999999887 5558999999999999887665 67999999999999988999999999999998
Q ss_pred cCcccchHHHHHHHHHHHHccccCeEEEEEEcCcch
Q 004164 148 MEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (771)
Q Consensus 148 ~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~ 183 (771)
.+. ..+++++.++|||||++++.+.....
T Consensus 109 ~~~-------~~~l~~~~~~L~pgG~l~i~~~~~~~ 137 (211)
T 2gs9_A 109 EDV-------ERVLLEARRVLRPGGALVVGVLEALS 137 (211)
T ss_dssp SCH-------HHHHHHHHHHEEEEEEEEEEEECTTS
T ss_pred CCH-------HHHHHHHHHHcCCCCEEEEEecCCcC
Confidence 753 48999999999999999999876543
No 56
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.50 E-value=1.2e-13 Score=140.03 Aligned_cols=118 Identities=16% Similarity=0.118 Sum_probs=97.0
Q ss_pred HHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCC-CeEEEEcCCHHHHHHHHHHhhcCC------CCcEEEEeecC
Q 004164 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR------SDMRWRVMDMT 126 (771)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~-~~V~~vDiS~~~i~~~~~~~~~~~------~~i~~~~~D~~ 126 (771)
...+.+++.. .++.+|||+|||+|.++..+++.+. .+|+++|+|+.+++.+++++...+ .+++++++|+.
T Consensus 18 ~~~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (217)
T 3jwh_A 18 MNGVVAALKQ---SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT 94 (217)
T ss_dssp HHHHHHHHHH---TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT
T ss_pred HHHHHHHHHh---cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc
Confidence 3345555543 4678999999999999999998753 699999999999999988765433 27999999998
Q ss_pred CCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 127 SMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 127 ~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
..++++++||+|++..+++++.++. +..+++++.++|||||++++...
T Consensus 95 ~~~~~~~~fD~v~~~~~l~~~~~~~-----~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 95 YQDKRFHGYDAATVIEVIEHLDLSR-----LGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp SCCGGGCSCSEEEEESCGGGCCHHH-----HHHHHHHHHTTTCCSEEEEEEEB
T ss_pred cccccCCCcCEEeeHHHHHcCCHHH-----HHHHHHHHHHHcCCCEEEEEccC
Confidence 8887778999999999999986543 57999999999999997776654
No 57
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.50 E-value=1.4e-13 Score=141.34 Aligned_cols=126 Identities=19% Similarity=0.228 Sum_probs=103.8
Q ss_pred chhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCC
Q 004164 49 EWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM 128 (771)
Q Consensus 49 ~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l 128 (771)
.+......+.+++... ..++.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++....+.++.+.++|+.++
T Consensus 19 ~~~~~~~~~~~~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 96 (246)
T 1y8c_A 19 DYKKWSDFIIEKCVEN-NLVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNL 96 (246)
T ss_dssp CHHHHHHHHHHHHHTT-TCCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGC
T ss_pred cHHHHHHHHHHHHHHh-CCCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccC
Confidence 4455566666766541 12678999999999999999999876 899999999999999887765555899999999998
Q ss_pred CCCCCCccEEEecc-ccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 129 QFMDETFDVILDKG-GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 129 ~~~~~sFDlVi~~~-~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
+++ ++||+|++.. +++++.+.+ ....++++++++|+|||++++.....
T Consensus 97 ~~~-~~fD~v~~~~~~l~~~~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 97 NIN-RKFDLITCCLDSTNYIIDSD----DLKKYFKAVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp CCS-CCEEEEEECTTGGGGCCSHH----HHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred Ccc-CCceEEEEcCccccccCCHH----HHHHHHHHHHHhcCCCcEEEEEecCH
Confidence 877 8999999998 999985432 26799999999999999999866553
No 58
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.50 E-value=1.5e-13 Score=138.37 Aligned_cols=102 Identities=25% Similarity=0.314 Sum_probs=90.4
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEecccccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~ 146 (771)
.++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++. ++.+.++|+.+++ .+++||+|++..++++
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-----~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 114 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL-----GRPVRTMLFHQLD-AIDAYDAVWAHACLLH 114 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-----TSCCEECCGGGCC-CCSCEEEEEECSCGGG
T ss_pred CCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc-----CCceEEeeeccCC-CCCcEEEEEecCchhh
Confidence 3678999999999999999999877 9999999999999887765 5788999999988 7799999999999999
Q ss_pred ccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 147 l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+...+ ...+++++.++|||||++++....
T Consensus 115 ~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 115 VPRDE-----LADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp SCHHH-----HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCHHH-----HHHHHHHHHHhcCCCcEEEEEEcC
Confidence 86333 679999999999999999998654
No 59
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.50 E-value=3.3e-14 Score=151.57 Aligned_cols=123 Identities=20% Similarity=0.326 Sum_probs=100.0
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC----CCcEEEEeecC
Q 004164 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR----SDMRWRVMDMT 126 (771)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~----~~i~~~~~D~~ 126 (771)
......+...+.. ++.+|||||||+|.++..|++.+. +|+++|+|+.+++.++++....+ .+++++++|+.
T Consensus 69 ~~~~~~~~~~~~~----~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 69 TSEAREFATRTGP----VSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS 143 (299)
T ss_dssp HHHHHHHHHHHCC----CCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT
T ss_pred cHHHHHHHHhhCC----CCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchh
Confidence 3444556666653 445999999999999999999976 89999999999999988876555 67999999999
Q ss_pred CCCCCCCCccEEEec-cccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcchh
Q 004164 127 SMQFMDETFDVILDK-GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHV 184 (771)
Q Consensus 127 ~l~~~~~sFDlVi~~-~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~~ 184 (771)
++++ +++||+|++. .+++++...+ ...++++++++|+|||+|++.++..+..
T Consensus 144 ~~~~-~~~fD~v~~~~~~~~~~~~~~-----~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 196 (299)
T 3g2m_A 144 AFAL-DKRFGTVVISSGSINELDEAD-----RRGLYASVREHLEPGGKFLLSLAMSEAA 196 (299)
T ss_dssp BCCC-SCCEEEEEECHHHHTTSCHHH-----HHHHHHHHHHHEEEEEEEEEEEECCHHH
T ss_pred cCCc-CCCcCEEEECCcccccCCHHH-----HHHHHHHHHHHcCCCcEEEEEeecCccc
Confidence 9987 6899988865 5566553222 6799999999999999999999886654
No 60
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.50 E-value=9.9e-14 Score=140.91 Aligned_cols=110 Identities=28% Similarity=0.370 Sum_probs=94.2
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEeccccccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDAL 147 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l 147 (771)
++.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++....+.+++++++|+.++++++++||+|++..+++..
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~ 116 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHF 116 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGC
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhC
Confidence 478999999999999999999877 9999999999999998877666678999999999988888899999999885443
Q ss_pred cCcccchHHHHHHHHHHHHccccCeEEEEEEcCcch
Q 004164 148 MEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (771)
Q Consensus 148 ~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~ 183 (771)
...+ ...++++++++|+|||++++.+...+.
T Consensus 117 ~~~~-----~~~~l~~~~~~L~~gG~l~~~~~~~~~ 147 (227)
T 1ve3_A 117 EPLE-----LNQVFKEVRRVLKPSGKFIMYFTDLRE 147 (227)
T ss_dssp CHHH-----HHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred CHHH-----HHHHHHHHHHHcCCCcEEEEEecChHH
Confidence 3222 568999999999999999998876433
No 61
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.50 E-value=1.1e-13 Score=143.18 Aligned_cols=136 Identities=17% Similarity=0.237 Sum_probs=101.3
Q ss_pred HhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHH
Q 004164 28 KENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDM 107 (771)
Q Consensus 28 ~~yWd~~y~~~~~~~~~ew~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~ 107 (771)
.+||+..|.... ..+......+..++......++.+|||+|||+|.++..|++.|. +|+++|+|+.+++.+
T Consensus 9 a~~yd~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a 79 (252)
T 1wzn_A 9 AEYYDTIYRRRI--------ERVKAEIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVA 79 (252)
T ss_dssp GGGHHHHTHHHH--------HTHHHHHHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHH
T ss_pred HHHHHHHHhcch--------hhhHHHHHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHH
Confidence 568888776431 11222223333333322224678999999999999999999887 999999999999999
Q ss_pred HHHhhcCCCCcEEEEeecCCCCCCCCCccEEEeccc-cccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 108 LRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGG-LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 108 ~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~-l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
+++....+.++.++++|+.+++++ ++||+|++... ++++ ..+ ....++++++++|+|||++++..
T Consensus 80 ~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~-~~~----~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 80 RRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYF-DEE----DLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp HHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGGS-CHH----HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchhcC-CHH----HHHHHHHHHHHHcCCCeEEEEec
Confidence 888766666899999999998765 68999998643 4443 221 26799999999999999998754
No 62
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.50 E-value=9.1e-14 Score=145.07 Aligned_cols=134 Identities=17% Similarity=0.152 Sum_probs=103.8
Q ss_pred HhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHH
Q 004164 28 KENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDM 107 (771)
Q Consensus 28 ~~yWd~~y~~~~~~~~~ew~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~ 107 (771)
.++|+..+.... ..|......+...+...+ +++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.+
T Consensus 19 a~~yd~~~~~~~----~~~~~~~~~~~~~l~~~~-----~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a 88 (263)
T 3pfg_A 19 AELYDLVHQGKG----KDYHREAADLAALVRRHS-----PKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIA 88 (263)
T ss_dssp HHHHHHHHHHTT----CCHHHHHHHHHHHHHHHC-----TTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHH
T ss_pred HHHHHHHhhcCC----CCHHHHHHHHHHHHHhhC-----CCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHH
Confidence 467777775431 113233333334444443 2568999999999999999999876 899999999999988
Q ss_pred HHHhhcCCCCcEEEEeecCCCCCCCCCccEEEecc-ccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 108 LRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKG-GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 108 ~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~-~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
++++ +++.++++|+.++++ +++||+|++.. +++++.+.+ ....++++++++|+|||++++..+.
T Consensus 89 ~~~~----~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~~----~~~~~l~~~~~~L~pgG~l~i~~~~ 153 (263)
T 3pfg_A 89 RRRN----PDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQA----ELDAALERFAAHVLPDGVVVVEPWW 153 (263)
T ss_dssp HHHC----TTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHHH----HHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred HhhC----CCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCHH----HHHHHHHHHHHhcCCCcEEEEEecc
Confidence 7765 379999999999887 68999999998 999986433 2678999999999999999997543
No 63
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.49 E-value=1.5e-13 Score=142.81 Aligned_cols=103 Identities=17% Similarity=0.230 Sum_probs=92.5
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEecccccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~ 146 (771)
.++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++.....+++.+.++|+.++++++++||+|++..++++
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 116 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGY-RYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHL 116 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchhh
Confidence 4678999999999999999998865 999999999999988877633457899999999999988899999999999999
Q ss_pred ccCcccchHHHHHHHHHHHHccccCeEEEEE
Q 004164 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 177 (771)
Q Consensus 147 l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~ 177 (771)
+.+. ..++.++.++|+|||++++.
T Consensus 117 ~~~~-------~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 117 VPDW-------PKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CTTH-------HHHHHHHHHHEEEEEEEEEE
T ss_pred cCCH-------HHHHHHHHHHCCCCcEEEEE
Confidence 8753 48999999999999999987
No 64
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.49 E-value=2.1e-13 Score=144.20 Aligned_cols=105 Identities=19% Similarity=0.282 Sum_probs=94.2
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEeccccccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDAL 147 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l 147 (771)
++.+|||+|||+|.++..|++.|. +|+++|+|+.+++.++++....+.++++.++|+.++++ +++||+|++..+++++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~ 197 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMFL 197 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGS
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhhC
Confidence 678999999999999999999987 99999999999999988776665689999999999877 7899999999999998
Q ss_pred cCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 148 MEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 148 ~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
..+. ...+++++.++|+|||+++++..
T Consensus 198 ~~~~-----~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 198 NRER-----VPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp CGGG-----HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CHHH-----HHHHHHHHHHhcCCCcEEEEEEe
Confidence 6554 67999999999999999877664
No 65
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.49 E-value=6.8e-14 Score=141.56 Aligned_cols=115 Identities=15% Similarity=0.137 Sum_probs=98.6
Q ss_pred HHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcC--CCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCC
Q 004164 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG--FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMD 132 (771)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g--~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~ 132 (771)
.+...+.. .++.+|||+|||+|.++..+++.+ ..+|+++|+|+.+++.++++....+ +++++.++|+.++++++
T Consensus 28 ~~~~~~~~---~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~ 104 (219)
T 3dh0_A 28 KVLKEFGL---KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPD 104 (219)
T ss_dssp HHHHHHTC---CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCS
T ss_pred HHHHHhCC---CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCC
Confidence 34455543 577899999999999999999885 3599999999999999988765444 47999999999999989
Q ss_pred CCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 133 ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 133 ~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
++||+|++..+++++.+ ...+++++.++|+|||++++.++.
T Consensus 105 ~~fD~v~~~~~l~~~~~-------~~~~l~~~~~~LkpgG~l~i~~~~ 145 (219)
T 3dh0_A 105 NTVDFIFMAFTFHELSE-------PLKFLEELKRVAKPFAYLAIIDWK 145 (219)
T ss_dssp SCEEEEEEESCGGGCSS-------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCeeEEEeehhhhhcCC-------HHHHHHHHHHHhCCCeEEEEEEec
Confidence 99999999999999865 348999999999999999998865
No 66
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.49 E-value=1.2e-13 Score=141.71 Aligned_cols=114 Identities=17% Similarity=0.291 Sum_probs=98.0
Q ss_pred HHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCC
Q 004164 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDET 134 (771)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~s 134 (771)
..+..++.. .++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.++++... .++.+.++|+.++++++++
T Consensus 33 ~~l~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~d~~~~~~~~~~ 107 (243)
T 3bkw_A 33 PALRAMLPE---VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD--TGITYERADLDKLHLPQDS 107 (243)
T ss_dssp HHHHHHSCC---CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS--SSEEEEECCGGGCCCCTTC
T ss_pred HHHHHhccc---cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc--CCceEEEcChhhccCCCCC
Confidence 346666654 47789999999999999999998766999999999999988766532 4799999999999888899
Q ss_pred ccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 135 FDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 135 FDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
||+|++..+++++.+ ...++++++++|+|||++++.+..
T Consensus 108 fD~v~~~~~l~~~~~-------~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 108 FDLAYSSLALHYVED-------VARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp EEEEEEESCGGGCSC-------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ceEEEEeccccccch-------HHHHHHHHHHhcCcCcEEEEEeCC
Confidence 999999999999865 459999999999999999998754
No 67
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.49 E-value=7.7e-14 Score=145.87 Aligned_cols=117 Identities=17% Similarity=0.247 Sum_probs=98.9
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC
Q 004164 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ 129 (771)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~ 129 (771)
+..+...+.+.+.. .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++ ..+++++++|+.+++
T Consensus 19 ~~~~~~~l~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~-----~~~~~~~~~d~~~~~ 89 (261)
T 3ege_A 19 DIRIVNAIINLLNL---PKGSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMRQQAVV-----HPQVEWFTGYAENLA 89 (261)
T ss_dssp CHHHHHHHHHHHCC---CTTCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHHHSSCC-----CTTEEEECCCTTSCC
T ss_pred cHHHHHHHHHHhCC---CCCCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHHHHHHh-----ccCCEEEECchhhCC
Confidence 44566677777764 5788999999999999999998765 99999999988875432 238999999999999
Q ss_pred CCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcch
Q 004164 130 FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (771)
Q Consensus 130 ~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~ 183 (771)
+++++||+|++..+++++.+ ...++++++++|| ||++++.++..+.
T Consensus 90 ~~~~~fD~v~~~~~l~~~~~-------~~~~l~~~~~~Lk-gG~~~~~~~~~~~ 135 (261)
T 3ege_A 90 LPDKSVDGVISILAIHHFSH-------LEKSFQEMQRIIR-DGTIVLLTFDIRL 135 (261)
T ss_dssp SCTTCBSEEEEESCGGGCSS-------HHHHHHHHHHHBC-SSCEEEEEECGGG
T ss_pred CCCCCEeEEEEcchHhhccC-------HHHHHHHHHHHhC-CcEEEEEEcCCch
Confidence 99999999999999999865 4599999999999 9999998876443
No 68
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.49 E-value=1.9e-13 Score=132.67 Aligned_cols=100 Identities=19% Similarity=0.305 Sum_probs=89.0
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEecccccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~ 146 (771)
.++.+|||+|||+|.++..+++.+. +++++|+|+.+++.++++ .+++++.+.| +++++++||+|++..++++
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~----~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~ 87 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK----FDSVITLSDP---KEIPDNSVDFILFANSFHD 87 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH----CTTSEEESSG---GGSCTTCEEEEEEESCSTT
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh----CCCcEEEeCC---CCCCCCceEEEEEccchhc
Confidence 4678999999999999999999876 999999999999988666 4689999999 6777899999999999999
Q ss_pred ccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 147 l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
+.+ ...+++++.++|+|||++++.++..
T Consensus 88 ~~~-------~~~~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 88 MDD-------KQHVISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp CSC-------HHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ccC-------HHHHHHHHHHhcCCCCEEEEEEcCc
Confidence 865 3599999999999999999998753
No 69
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.48 E-value=1.2e-13 Score=145.00 Aligned_cols=107 Identities=24% Similarity=0.393 Sum_probs=95.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC-CCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCCCCccEEEecccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g-~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~sFDlVi~~~~l 144 (771)
.++.+|||||||+|.++..+++.+ ..+|+++|+|+.+++.++++....+ +++++.+.|+.++++++++||+|++..++
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 115 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVL 115 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechh
Confidence 578899999999999999999884 3599999999999998888765544 57999999999999989999999999999
Q ss_pred ccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+++.++. .+++++.++|||||++++.+..
T Consensus 116 ~~~~~~~-------~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 116 EHLQSPE-------EALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp GGCSCHH-------HHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhcCCHH-------HHHHHHHHHcCCCcEEEEEEcC
Confidence 9987644 8999999999999999998743
No 70
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.48 E-value=9.6e-14 Score=146.39 Aligned_cols=110 Identities=25% Similarity=0.467 Sum_probs=94.7
Q ss_pred HHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCcc
Q 004164 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFD 136 (771)
Q Consensus 57 l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFD 136 (771)
+.+.+.. .++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++. +++.+.++|+.++++ +++||
T Consensus 49 l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~-~~~fD 119 (279)
T 3ccf_A 49 LLQLLNP---QPGEFILDLGCGTGQLTEKIAQSGA-EVLGTDNAATMIEKARQNY----PHLHFDVADARNFRV-DKPLD 119 (279)
T ss_dssp HHHHHCC---CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC----TTSCEEECCTTTCCC-SSCEE
T ss_pred HHHHhCC---CCCCEEEEecCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHhhC----CCCEEEECChhhCCc-CCCcC
Confidence 5555553 5778999999999999999998655 9999999999999886654 679999999999987 58999
Q ss_pred EEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcc
Q 004164 137 VILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (771)
Q Consensus 137 lVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~ 182 (771)
+|++..+++++.+. ..++.+++++|||||++++......
T Consensus 120 ~v~~~~~l~~~~d~-------~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 120 AVFSNAMLHWVKEP-------EAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp EEEEESCGGGCSCH-------HHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred EEEEcchhhhCcCH-------HHHHHHHHHhcCCCcEEEEEecCCc
Confidence 99999999998764 4899999999999999999887643
No 71
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.47 E-value=1.6e-13 Score=144.99 Aligned_cols=107 Identities=16% Similarity=0.273 Sum_probs=94.7
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCC-CCCCCccEEEecccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ-FMDETFDVILDKGGL 144 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~-~~~~sFDlVi~~~~l 144 (771)
++.+|||||||+|.++..+++.+. +|+++|+|+.+++.++++....+ ++++++++|+.+++ +.+++||+|++.+++
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 467999999999999999999977 99999999999999988775544 57999999999987 788999999999999
Q ss_pred ccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcc
Q 004164 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (771)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~ 182 (771)
+++.++ ..+++++.++|||||++++.++...
T Consensus 147 ~~~~~~-------~~~l~~~~~~LkpgG~l~~~~~~~~ 177 (285)
T 4htf_A 147 EWVADP-------RSVLQTLWSVLRPGGVLSLMFYNAH 177 (285)
T ss_dssp GGCSCH-------HHHHHHHHHTEEEEEEEEEEEEBHH
T ss_pred hcccCH-------HHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 998764 4899999999999999999987643
No 72
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.47 E-value=1.7e-13 Score=145.37 Aligned_cols=157 Identities=15% Similarity=0.127 Sum_probs=103.3
Q ss_pred hhhhhccCCCCHhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEE
Q 004164 17 DLLQTLGDFTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITN 96 (771)
Q Consensus 17 ~lP~~~~~f~~~~yWd~~y~~~~~~~~~ew~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~ 96 (771)
.+-..+..|....||+.+|.... .....-..........+.+++.. ...++.+|||||||+|..+..++..+..+|+|
T Consensus 22 ~~~~~y~~~~~~~y~~~~y~~~~-~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~g 99 (289)
T 2g72_A 22 AVASAYQRFEPRAYLRNNYAPPR-GDLCNPNGVGPWKLRCLAQTFAT-GEVSGRTLIDIGSGPTVYQLLSACSHFEDITM 99 (289)
T ss_dssp HHHHHGGGCCHHHHHHHHHSTTT-TCCSSTTSHHHHHHHHHHHHHHT-SCSCCSEEEEETCTTCCGGGTTGGGGCSEEEE
T ss_pred HHHHHHhccCHHHHHHHHhcCcc-cchhhhhHHHHHHHHHHHHHhCC-CCCCCCeEEEECCCcChHHHHhhccCCCeEEE
Confidence 35555556777788888886541 11100000111122344455432 11367899999999999655444443459999
Q ss_pred EcCCHHHHHHHHHHhhcCCC-------------------------------CcEEEEeecCC-CCC-----CCCCccEEE
Q 004164 97 VDFSKVVISDMLRRNVRDRS-------------------------------DMRWRVMDMTS-MQF-----MDETFDVIL 139 (771)
Q Consensus 97 vDiS~~~i~~~~~~~~~~~~-------------------------------~i~~~~~D~~~-l~~-----~~~sFDlVi 139 (771)
+|+|+.|++.++++...... .+.++.+|+.+ +++ ++++||+|+
T Consensus 100 vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~ 179 (289)
T 2g72_A 100 TDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALV 179 (289)
T ss_dssp ECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEE
T ss_pred eCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEE
Confidence 99999999988775432110 14577779988 553 456799999
Q ss_pred eccccccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 140 DKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 140 ~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
+..+++++.... .....++++++++|||||+|++..
T Consensus 180 ~~~~l~~~~~~~---~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 180 SAFCLEAVSPDL---ASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp EESCHHHHCSSH---HHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ehhhhhhhcCCH---HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999999965431 116799999999999999999974
No 73
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.46 E-value=1e-13 Score=148.48 Aligned_cols=113 Identities=17% Similarity=0.175 Sum_probs=90.0
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCC-------CcEEEEeec------CCC--CCCC
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS-------DMRWRVMDM------TSM--QFMD 132 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~-------~i~~~~~D~------~~l--~~~~ 132 (771)
++.+|||||||+|..+..++..+..+|+|+|+|+.||+.|++++..... ++.|.+.|+ .++ ++++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 5789999999999877767666656999999999999999888754332 267888888 322 3567
Q ss_pred CCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcchh
Q 004164 133 ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHV 184 (771)
Q Consensus 133 ~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~~ 184 (771)
++||+|++..+++++.+.+. ...++++++++|||||+|++.+.....+
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~----~~~~l~~~~r~LkpGG~~i~~~~~~~~~ 175 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRH----YATVMNNLSELTASGGKVLITTMDGDKL 175 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTT----HHHHHHHHHHHEEEEEEEEEEEECHHHH
T ss_pred CCeeEEEECchHHHhCCHHH----HHHHHHHHHHHcCCCCEEEEEeCCHHHH
Confidence 89999999999988654331 5699999999999999999998764443
No 74
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.46 E-value=9.3e-14 Score=142.91 Aligned_cols=111 Identities=19% Similarity=0.098 Sum_probs=91.6
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCC--CCCCCCccEEEe-ccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM--QFMDETFDVILD-KGG 143 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l--~~~~~sFDlVi~-~~~ 143 (771)
.++.+|||||||+|.++..+++.+..+|+++|+|+.+++.++++....+.++.++++|+.++ ++++++||+|++ ...
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~ 138 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCcc
Confidence 36789999999999999999887666899999999999999888766667899999999998 888999999998 444
Q ss_pred cccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+ ...... ......++++++++|||||+|++.++.
T Consensus 139 ~-~~~~~~--~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 139 L-SEETWH--THQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp C-BGGGTT--THHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred c-chhhhh--hhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 4 222211 123567899999999999999987754
No 75
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.45 E-value=9e-13 Score=129.88 Aligned_cols=151 Identities=9% Similarity=0.078 Sum_probs=100.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCC-CCCCCccEEEec-cc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ-FMDETFDVILDK-GG 143 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~-~~~~sFDlVi~~-~~ 143 (771)
.++.+|||+|||+|.++..|++.+. +|+++|+|+.+++.++++....+ .++++++.|+..++ +.+++||+|++. +.
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLSK-KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTSS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 4688999999999999999999854 99999999999999988775444 68999998887753 457899999876 22
Q ss_pred cccccC-cccchHHHHHHHHHHHHccccCeEEEEEEcCcch-------hhcchhhhh-ccCcEEEEeecCCCCCCCCCCc
Q 004164 144 LDALME-PELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH-------VLGLLFPKF-RFGWKMSVHAIPQKSSSEPSLQ 214 (771)
Q Consensus 144 l~~l~~-~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~-------~~~~l~~~~-~~~w~~~~~~i~~~~~~~~~l~ 214 (771)
+..... ..........+++++.++|||||+++++.+.... ......... ...|.+....... ....+
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~ 175 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLN----QINTP 175 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESS----CSSCC
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhc----cCCCC
Confidence 221000 0001122568899999999999999998875211 111122222 2356665544432 22355
Q ss_pred cEEEEEEE
Q 004164 215 TFMVVADK 222 (771)
Q Consensus 215 ~f~~v~~k 222 (771)
+|++++.|
T Consensus 176 ~~~~~i~~ 183 (185)
T 3mti_A 176 PFLVMLEK 183 (185)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEe
Confidence 66666655
No 76
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.45 E-value=3.8e-13 Score=144.39 Aligned_cols=108 Identities=22% Similarity=0.276 Sum_probs=95.7
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEecc
Q 004164 66 SSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKG 142 (771)
Q Consensus 66 ~~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~ 142 (771)
..++.+|||+|||+|.++..+++. +. +|+++|+|+.+++.++++....+ .+++++++|+.++++++++||+|++..
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 193 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNE 193 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEES
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECC
Confidence 367889999999999999999988 65 89999999999999988776554 479999999999999899999999999
Q ss_pred ccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcc
Q 004164 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (771)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~ 182 (771)
+++++ + ...+++++.++|||||++++.+....
T Consensus 194 ~l~~~-~-------~~~~l~~~~~~LkpgG~l~~~~~~~~ 225 (312)
T 3vc1_A 194 STMYV-D-------LHDLFSEHSRFLKVGGRYVTITGCWN 225 (312)
T ss_dssp CGGGS-C-------HHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred chhhC-C-------HHHHHHHHHHHcCCCcEEEEEEcccc
Confidence 99998 3 35999999999999999999886533
No 77
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.45 E-value=5e-13 Score=141.53 Aligned_cols=106 Identities=20% Similarity=0.288 Sum_probs=94.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEecccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l 144 (771)
.++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.++++......++++.++|+.+++++ ++||+|++..++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~l 99 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-DKYDIAICHAFL 99 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-CCeeEEEECChh
Confidence 56789999999999999999987 2 25999999999999999888766666899999999999885 699999999999
Q ss_pred ccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+++.+. ..++++++++|||||++++.+..
T Consensus 100 ~~~~~~-------~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 100 LHMTTP-------ETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GGCSSH-------HHHHHHHHHTEEEEEEEEEEECC
T ss_pred hcCCCH-------HHHHHHHHHHcCCCCEEEEEecc
Confidence 998764 49999999999999999998865
No 78
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.44 E-value=4.9e-13 Score=136.84 Aligned_cols=134 Identities=19% Similarity=0.256 Sum_probs=103.0
Q ss_pred HhhHHHHHhhcCCCCccccccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHH
Q 004164 28 KENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDM 107 (771)
Q Consensus 28 ~~yWd~~y~~~~~~~~~ew~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~ 107 (771)
.++|+..+.... ..|......+...+..++ .++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.+
T Consensus 9 a~~yd~~~~~~~----~~~~~~~~~~~~~l~~~~-----~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a 78 (239)
T 3bxo_A 9 ADVYDLFYLGRG----KDYAAEASDIADLVRSRT-----PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHA 78 (239)
T ss_dssp HHHHHHHHHHHT----CCHHHHHHHHHHHHHHHC-----TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHH
T ss_pred HHHHHHHhhccH----hhHHHHHHHHHHHHHHhc-----CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHH
Confidence 568888775431 112222223334444444 3678999999999999999998876 999999999999988
Q ss_pred HHHhhcCCCCcEEEEeecCCCCCCCCCccEEEe-ccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 108 LRRNVRDRSDMRWRVMDMTSMQFMDETFDVILD-KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 108 ~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~-~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+++. +++.+.++|+.++++ +++||+|++ .++++++.+++ ....++++++++|+|||++++.++.
T Consensus 79 ~~~~----~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 79 RKRL----PDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKTTE----ELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp HHHC----TTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCSHH----HHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred HHhC----CCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCCHH----HHHHHHHHHHHhcCCCeEEEEEecc
Confidence 7654 579999999999887 689999995 55888886533 2679999999999999999987654
No 79
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.44 E-value=7.9e-13 Score=135.64 Aligned_cols=120 Identities=23% Similarity=0.316 Sum_probs=99.8
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC
Q 004164 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ 129 (771)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~ 129 (771)
+..+...+...+. ++.+|||+|||+|.++..+++. .+++++|+|+.+++.++++....+.++++.++|+.+++
T Consensus 20 ~~~~~~~~~~~~~-----~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 92 (243)
T 3d2l_A 20 YPEWVAWVLEQVE-----PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELE 92 (243)
T ss_dssp HHHHHHHHHHHSC-----TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC
T ss_pred HHHHHHHHHHHcC-----CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcC
Confidence 3455556677764 4689999999999999999887 49999999999999998877666678999999999988
Q ss_pred CCCCCccEEEecc-ccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 130 FMDETFDVILDKG-GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 130 ~~~~sFDlVi~~~-~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
++ ++||+|++.. +++++.+.+ ....+++++.++|+|||++++.....
T Consensus 93 ~~-~~fD~v~~~~~~~~~~~~~~----~~~~~l~~~~~~L~pgG~l~~~~~~~ 140 (243)
T 3d2l_A 93 LP-EPVDAITILCDSLNYLQTEA----DVKQTFDSAARLLTDGGKLLFDVHSP 140 (243)
T ss_dssp CS-SCEEEEEECTTGGGGCCSHH----HHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CC-CCcCEEEEeCCchhhcCCHH----HHHHHHHHHHHhcCCCeEEEEEcCCH
Confidence 76 8999999986 888875433 26789999999999999999876553
No 80
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.43 E-value=4.8e-13 Score=139.63 Aligned_cols=114 Identities=21% Similarity=0.293 Sum_probs=93.2
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCC
Q 004164 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQF 130 (771)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~ 130 (771)
..+...+..++. ++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++.. . .+.++|+.++++
T Consensus 42 ~~~~~~l~~~~~-----~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~---~--~~~~~d~~~~~~ 110 (260)
T 2avn_A 42 RLIGSFLEEYLK-----NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGV---K--NVVEAKAEDLPF 110 (260)
T ss_dssp HHHHHHHHHHCC-----SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTC---S--CEEECCTTSCCS
T ss_pred HHHHHHHHHhcC-----CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcC---C--CEEECcHHHCCC
Confidence 334445555542 578999999999999999999876 99999999999998877653 1 289999999998
Q ss_pred CCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 131 MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 131 ~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
++++||+|++.+++.++... ...+++++.++|+|||++++.....
T Consensus 111 ~~~~fD~v~~~~~~~~~~~~------~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 111 PSGAFEAVLALGDVLSYVEN------KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp CTTCEEEEEECSSHHHHCSC------HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred CCCCEEEEEEcchhhhcccc------HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 88999999998877665322 4589999999999999999988764
No 81
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.43 E-value=3.1e-13 Score=143.10 Aligned_cols=115 Identities=20% Similarity=0.260 Sum_probs=95.9
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCC-CCCCccEEEeccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQF-MDETFDVILDKGG 143 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~-~~~sFDlVi~~~~ 143 (771)
.++.+|||+|||+|.++..++..+..+|+++|+|+.+++.++++....+ .++.++++|+.++++ ++++||+|++..+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 3678999999999999999988877799999999999999988775443 368999999999887 6789999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcchh
Q 004164 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHV 184 (771)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~~ 184 (771)
++++.... .....+++++.++|+|||++++.+.....+
T Consensus 143 l~~~~~~~---~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 180 (298)
T 1ri5_A 143 FHYAFSTS---ESLDIAQRNIARHLRPGGYFIMTVPSRDVI 180 (298)
T ss_dssp GGGGGSSH---HHHHHHHHHHHHTEEEEEEEEEEEECHHHH
T ss_pred hhhhcCCH---HHHHHHHHHHHHhcCCCCEEEEEECCHHHH
Confidence 98742111 126799999999999999999998765443
No 82
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.43 E-value=6.9e-13 Score=137.59 Aligned_cols=102 Identities=19% Similarity=0.239 Sum_probs=90.2
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEeccccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~ 145 (771)
.++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.++++ .+++.+.++|+.+++ ++++||+|++..+++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~----~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~ 106 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR----LPNTNFGKADLATWK-PAQKADLLYANAVFQ 106 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH----STTSEEEECCTTTCC-CSSCEEEEEEESCGG
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh----CCCcEEEECChhhcC-ccCCcCEEEEeCchh
Confidence 57789999999999999999987 234899999999999988665 468999999999988 788999999999999
Q ss_pred cccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 146 ~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
++.+ ...++.+++++|+|||++++.+..
T Consensus 107 ~~~~-------~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 107 WVPD-------HLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp GSTT-------HHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred hCCC-------HHHHHHHHHHhcCCCeEEEEEeCC
Confidence 9865 348999999999999999998854
No 83
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.42 E-value=1.2e-12 Score=139.72 Aligned_cols=113 Identities=15% Similarity=0.205 Sum_probs=95.9
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEecc
Q 004164 66 SSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKG 142 (771)
Q Consensus 66 ~~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~ 142 (771)
..++.+|||||||+|.++..+++. | .+|+++|+|+.+++.++++....+ .++++.++|+.++ +++||+|++.+
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~ 145 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLG 145 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEES
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcc
Confidence 367889999999999999999998 7 499999999999999988876544 3799999999876 68999999999
Q ss_pred ccccccCccc--chHHHHHHHHHHHHccccCeEEEEEEcCcc
Q 004164 143 GLDALMEPEL--GHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (771)
Q Consensus 143 ~l~~l~~~~~--~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~ 182 (771)
+++++.+++. +......+++++.++|||||++++.++..+
T Consensus 146 ~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 146 AFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp CGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred hHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 9999976521 112367999999999999999999887644
No 84
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.42 E-value=1.4e-12 Score=137.82 Aligned_cols=114 Identities=17% Similarity=0.241 Sum_probs=95.2
Q ss_pred HhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCc
Q 004164 59 SLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETF 135 (771)
Q Consensus 59 ~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sF 135 (771)
.++......++.+|||||||+|.++..+++. |. +|+++|+|+.+++.++++....+ +++++.++|+.+++ ++|
T Consensus 55 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~f 130 (287)
T 1kpg_A 55 LALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPV 130 (287)
T ss_dssp HHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCC
T ss_pred HHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCe
Confidence 3333333467889999999999999999854 66 99999999999999988775443 47999999998765 789
Q ss_pred cEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 136 DVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 136 DlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
|+|++.++++++...+ ...++++++++|||||++++.+...
T Consensus 131 D~v~~~~~l~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 131 DRIVSIGAFEHFGHER-----YDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp SEEEEESCGGGTCTTT-----HHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred eEEEEeCchhhcChHH-----HHHHHHHHHHhcCCCCEEEEEEecC
Confidence 9999999999986433 5699999999999999999988764
No 85
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.42 E-value=4.1e-12 Score=127.41 Aligned_cols=120 Identities=13% Similarity=-0.021 Sum_probs=96.7
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcC-CCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCC
Q 004164 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTS 127 (771)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g-~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~ 127 (771)
...+...+...+.. .++.+|||+|||+|.++..+++.+ ..+|+++|+|+.+++.++++....+ ++++++++|+.+
T Consensus 25 ~~~i~~~~l~~l~~---~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 101 (204)
T 3e05_A 25 KQEVRAVTLSKLRL---QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPE 101 (204)
T ss_dssp CHHHHHHHHHHTTC---CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTT
T ss_pred hHHHHHHHHHHcCC---CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhh
Confidence 34555566666654 578999999999999999999985 3699999999999998887765433 679999999976
Q ss_pred CCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcc
Q 004164 128 MQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (771)
Q Consensus 128 l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~ 182 (771)
.....++||+|++..+++. ...+++++.++|+|||++++......
T Consensus 102 ~~~~~~~~D~i~~~~~~~~----------~~~~l~~~~~~LkpgG~l~~~~~~~~ 146 (204)
T 3e05_A 102 GLDDLPDPDRVFIGGSGGM----------LEEIIDAVDRRLKSEGVIVLNAVTLD 146 (204)
T ss_dssp TCTTSCCCSEEEESCCTTC----------HHHHHHHHHHHCCTTCEEEEEECBHH
T ss_pred hhhcCCCCCEEEECCCCcC----------HHHHHHHHHHhcCCCeEEEEEecccc
Confidence 5444478999998877652 45899999999999999999876633
No 86
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.42 E-value=3e-12 Score=127.41 Aligned_cols=156 Identities=12% Similarity=0.113 Sum_probs=110.0
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc--CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCC-CCCCCccEEEec
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ-FMDETFDVILDK 141 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~--g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~-~~~~sFDlVi~~ 141 (771)
.++.+|||+|||+|.++..+++. +.++|+++|+|+.+++.++++....+ ++++++++|+.+++ +.+++||+|++.
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEc
Confidence 46789999999999999999987 34599999999999999988776543 47999999998875 666899999987
Q ss_pred cccccccCc--ccchHHHHHHHHHHHHccccCeEEEEEEcCcch-------hhcchhhhh-ccCcEEEEeecCCCCCCCC
Q 004164 142 GGLDALMEP--ELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH-------VLGLLFPKF-RFGWKMSVHAIPQKSSSEP 211 (771)
Q Consensus 142 ~~l~~l~~~--~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~-------~~~~l~~~~-~~~w~~~~~~i~~~~~~~~ 211 (771)
..+....+. .........+++++.++|+|||++++..+.... ....+.... ...|.+....... ..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~----~~ 176 (197)
T 3eey_A 101 LGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFIN----QA 176 (197)
T ss_dssp ESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETT----CC
T ss_pred CCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEecc----Cc
Confidence 655110000 001112457999999999999999998865211 111222222 2367776555543 33
Q ss_pred CCccEEEEEEEcCCc
Q 004164 212 SLQTFMVVADKENSS 226 (771)
Q Consensus 212 ~l~~f~~v~~k~~~~ 226 (771)
..++|.++.+|....
T Consensus 177 ~~pp~~~~~~~~~~~ 191 (197)
T 3eey_A 177 NCPPILVCIEKISEG 191 (197)
T ss_dssp SCCCEEEEEEECCSS
T ss_pred cCCCeEEEEEEcccc
Confidence 467788988876543
No 87
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.40 E-value=2.5e-13 Score=140.13 Aligned_cols=114 Identities=18% Similarity=0.092 Sum_probs=91.5
Q ss_pred HHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCC--CCC
Q 004164 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM--QFM 131 (771)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l--~~~ 131 (771)
.+.+.+.+. .++.+|||||||+|..+..+++.+..+|++||+|+.+++.|+++......++.++.+|+.++ +++
T Consensus 50 m~~~a~~~~----~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~ 125 (236)
T 3orh_A 50 MHALAAAAS----SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLP 125 (236)
T ss_dssp HHHHHHHHT----TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSC
T ss_pred HHHHHHhhc----cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhccccc
Confidence 344555554 37899999999999999999887656899999999999999888877777899999988764 578
Q ss_pred CCCccEEEecc-----ccccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 132 DETFDVILDKG-----GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 132 ~~sFDlVi~~~-----~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
+++||.|+... .+.++.+ ...++++++|+|||||+|++.+
T Consensus 126 ~~~FD~i~~D~~~~~~~~~~~~~-------~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 126 DGHFDGILYDTYPLSEETWHTHQ-------FNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp TTCEEEEEECCCCCBGGGTTTHH-------HHHHHHTHHHHEEEEEEEEECC
T ss_pred ccCCceEEEeeeecccchhhhcc-------hhhhhhhhhheeCCCCEEEEEe
Confidence 89999997432 2233222 5689999999999999998754
No 88
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.40 E-value=6.8e-13 Score=138.80 Aligned_cols=112 Identities=19% Similarity=0.244 Sum_probs=88.2
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCC--
Q 004164 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQF-- 130 (771)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~-- 130 (771)
....+...+.. .++.+|||+|||+|.++..|++.|. +|+++|+|+.|++.++++.... ++..++.+++.
T Consensus 33 ~~~~il~~l~l---~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~-----~v~~~~~~~~~~~ 103 (261)
T 3iv6_A 33 DRENDIFLENI---VPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADR-----CVTIDLLDITAEI 103 (261)
T ss_dssp HHHHHHHTTTC---CTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSS-----CCEEEECCTTSCC
T ss_pred HHHHHHHhcCC---CCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhc-----cceeeeeeccccc
Confidence 34445555543 6788999999999999999999987 9999999999999888776433 34445544433
Q ss_pred ---CCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 131 ---MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 131 ---~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
.+++||+|++..+++++...+ ...++.++.++| |||++++...
T Consensus 104 ~~~~~~~fD~Vv~~~~l~~~~~~~-----~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 104 PKELAGHFDFVLNDRLINRFTTEE-----ARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp CGGGTTCCSEEEEESCGGGSCHHH-----HHHHHHHHHHHH-TTSEEEEEEE
T ss_pred ccccCCCccEEEEhhhhHhCCHHH-----HHHHHHHHHHhC-cCcEEEEEec
Confidence 257899999999999876444 678999999999 9999998754
No 89
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.40 E-value=2.2e-12 Score=138.56 Aligned_cols=115 Identities=10% Similarity=0.122 Sum_probs=96.5
Q ss_pred HhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCc
Q 004164 59 SLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETF 135 (771)
Q Consensus 59 ~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sF 135 (771)
.++......++.+|||+|||+|.++..+++. |. +|+++|+|+.+++.++++....+ +++++.++|+.+++ ++|
T Consensus 81 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~f 156 (318)
T 2fk8_A 81 LNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPV 156 (318)
T ss_dssp HHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCC
T ss_pred HHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCc
Confidence 3333333467889999999999999999987 77 99999999999999988775544 46999999998875 789
Q ss_pred cEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcc
Q 004164 136 DVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (771)
Q Consensus 136 DlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~ 182 (771)
|+|++.++++++...+ ...+++++.++|||||++++.+...+
T Consensus 157 D~v~~~~~l~~~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 157 DRIVSIEAFEHFGHEN-----YDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp SEEEEESCGGGTCGGG-----HHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred CEEEEeChHHhcCHHH-----HHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 9999999999986433 56999999999999999999887643
No 90
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.40 E-value=1.2e-11 Score=126.23 Aligned_cols=137 Identities=16% Similarity=0.155 Sum_probs=100.5
Q ss_pred CCCCeEEEEcCC-cchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCC-CCCCCCccEEEecccc
Q 004164 67 SPPPQILVPGCG-NSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM-QFMDETFDVILDKGGL 144 (771)
Q Consensus 67 ~~~~~ILDiGCG-~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l-~~~~~sFDlVi~~~~l 144 (771)
.++.+|||+||| +|.++..++.....+|+++|+|+.+++.+++.....+.+++++++|+..+ ++++++||+|+++..+
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~ 133 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPY 133 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCC
Confidence 478999999999 99999999988334999999999999999887766556899999997654 4567899999988665
Q ss_pred ccccCcc------------cchHHHHHHHHHHHHccccCeEEEEEEcCcchhhcchhhhh-ccCcEEEEeec
Q 004164 145 DALMEPE------------LGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKF-RFGWKMSVHAI 203 (771)
Q Consensus 145 ~~l~~~~------------~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~~~~~l~~~~-~~~w~~~~~~i 203 (771)
+...... .+......+++++.++|||||++++...........+...+ ..+|.+....+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 205 (230)
T 3evz_A 134 YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKF 205 (230)
T ss_dssp C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEe
Confidence 5433211 11222478999999999999999997755433334444444 44777666554
No 91
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.40 E-value=4.4e-12 Score=134.20 Aligned_cols=147 Identities=13% Similarity=0.084 Sum_probs=102.8
Q ss_pred cccccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhH-HHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEE
Q 004164 44 FEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLS-EHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWR 121 (771)
Q Consensus 44 ~ew~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls-~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~ 121 (771)
|-+|..|..+...-..++.. .++.+|||||||+|.++ ..+++....+|+++|+|+.+++.|+++....+ .+++|+
T Consensus 101 fpy~~~~~~l~~~E~~la~l---~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v 177 (298)
T 3fpf_A 101 FYFYPRYLELLKNEAALGRF---RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVI 177 (298)
T ss_dssp STTHHHHHHHHHHHHHHTTC---CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEE
T ss_pred CCCcccHHHHHHHHHHHcCC---CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEE
Confidence 33444444444443344433 68999999999999876 44555433499999999999999988765433 689999
Q ss_pred EeecCCCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcc-hhhcc-hhhhhccCcEEE
Q 004164 122 VMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES-HVLGL-LFPKFRFGWKMS 199 (771)
Q Consensus 122 ~~D~~~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~-~~~~~-l~~~~~~~w~~~ 199 (771)
++|+.+++ +++||+|+..+. .. + ..++++++.++|||||++++...... ....+ .......+|...
T Consensus 178 ~gDa~~l~--d~~FDvV~~~a~---~~--d-----~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~gf~~~ 245 (298)
T 3fpf_A 178 TGDETVID--GLEFDVLMVAAL---AE--P-----KRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDITGFRRA 245 (298)
T ss_dssp ESCGGGGG--GCCCSEEEECTT---CS--C-----HHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGTTEEEE
T ss_pred ECchhhCC--CCCcCEEEECCC---cc--C-----HHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhhhhhhe
Confidence 99999875 689999997554 22 2 45999999999999999999875421 11111 112334478777
Q ss_pred EeecCC
Q 004164 200 VHAIPQ 205 (771)
Q Consensus 200 ~~~i~~ 205 (771)
....+.
T Consensus 246 ~~~~p~ 251 (298)
T 3fpf_A 246 GVVLPS 251 (298)
T ss_dssp EEECCC
T ss_pred eEECCC
Confidence 666654
No 92
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.39 E-value=4.9e-13 Score=142.15 Aligned_cols=108 Identities=15% Similarity=0.093 Sum_probs=82.5
Q ss_pred CCCCeEEEEcCCcchhHHHH----Hhc-CCCeE--EEEcCCHHHHHHHHHHhhcC--CCCcEE--EEeecCCCC------
Q 004164 67 SPPPQILVPGCGNSRLSEHL----YDA-GFHGI--TNVDFSKVVISDMLRRNVRD--RSDMRW--RVMDMTSMQ------ 129 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~L----a~~-g~~~V--~~vDiS~~~i~~~~~~~~~~--~~~i~~--~~~D~~~l~------ 129 (771)
.++.+|||||||+|.++..+ +.. +...| +++|+|+.|++.+++++... .+++.+ ..+++.+++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 46779999999999876543 332 22334 99999999999988876542 234544 455555443
Q ss_pred CCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 130 FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 130 ~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
+++++||+|++..+++++.++. .+|++++++|||||++++.....
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~-------~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIP-------ATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHH-------HHHHHHHHTEEEEEEEEEEEECT
T ss_pred cCCCceeEEEEeeeeeecCCHH-------HHHHHHHHHcCCCcEEEEEEecC
Confidence 5678999999999999998754 89999999999999999987654
No 93
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.39 E-value=1.5e-12 Score=132.17 Aligned_cols=98 Identities=21% Similarity=0.245 Sum_probs=85.8
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEeccccccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDAL 147 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l 147 (771)
++.+|||+|||+|.++..++.. +++|+|+.+++.++++ ++.+.++|+.++++++++||+|++..+++++
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 115 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR------GVFVLKGTAENLPLKDESFDFALMVTTICFV 115 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT------TCEEEECBTTBCCSCTTCEEEEEEESCGGGS
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc------CCEEEEcccccCCCCCCCeeEEEEcchHhhc
Confidence 3789999999999999988654 9999999999877654 6899999999999888899999999999998
Q ss_pred cCcccchHHHHHHHHHHHHccccCeEEEEEEcCcch
Q 004164 148 MEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (771)
Q Consensus 148 ~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~ 183 (771)
.+. ..+++++.++|+|||++++.+.....
T Consensus 116 ~~~-------~~~l~~~~~~L~pgG~l~i~~~~~~~ 144 (219)
T 1vlm_A 116 DDP-------ERALKEAYRILKKGGYLIVGIVDRES 144 (219)
T ss_dssp SCH-------HHHHHHHHHHEEEEEEEEEEEECSSS
T ss_pred cCH-------HHHHHHHHHHcCCCcEEEEEEeCCcc
Confidence 653 48999999999999999998876433
No 94
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.38 E-value=1.4e-12 Score=131.94 Aligned_cols=101 Identities=23% Similarity=0.320 Sum_probs=85.7
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCC---CCCC-CCccEEEecc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM---QFMD-ETFDVILDKG 142 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l---~~~~-~sFDlVi~~~ 142 (771)
.++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++ .++.+.+.|+.++ ++.. ++||+|++..
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~ 124 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA-----GAGEVHLASYAQLAEAKVPVGKDYDLICANF 124 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT-----CSSCEEECCHHHHHTTCSCCCCCEEEEEEES
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh-----cccccchhhHHhhcccccccCCCccEEEECc
Confidence 3568999999999999999999877 999999999999877654 5678899888876 4444 4599999999
Q ss_pred ccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
+++ ..+. ..++++++++|+|||++++.+...
T Consensus 125 ~l~-~~~~-------~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 125 ALL-HQDI-------IELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp CCC-SSCC-------HHHHHHHHHTEEEEEEEEEEECCT
T ss_pred hhh-hhhH-------HHHHHHHHHHhCCCeEEEEEecCc
Confidence 999 4443 489999999999999999998764
No 95
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.38 E-value=6.9e-12 Score=126.38 Aligned_cols=117 Identities=13% Similarity=0.054 Sum_probs=93.7
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC-C-CcEEEEeecCCC
Q 004164 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-S-DMRWRVMDMTSM 128 (771)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~-~-~i~~~~~D~~~l 128 (771)
..+...+...+.. .++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++....+ + +++++++|+.+.
T Consensus 41 ~~~~~~~l~~l~~---~~~~~vLDlGcG~G~~~~~la~~~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 116 (204)
T 3njr_A 41 SPMRALTLAALAP---RRGELLWDIGGGSGSVSVEWCLAGG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA 116 (204)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG
T ss_pred HHHHHHHHHhcCC---CCCCEEEEecCCCCHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh
Confidence 3555566666654 5788999999999999999999854 99999999999998887765544 3 799999999884
Q ss_pred CCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcch
Q 004164 129 QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (771)
Q Consensus 129 ~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~ 183 (771)
.....+||+|++.+.+ . .. +++++.++|+|||++++.....+.
T Consensus 117 ~~~~~~~D~v~~~~~~------~-----~~-~l~~~~~~LkpgG~lv~~~~~~~~ 159 (204)
T 3njr_A 117 LADLPLPEAVFIGGGG------S-----QA-LYDRLWEWLAPGTRIVANAVTLES 159 (204)
T ss_dssp GTTSCCCSEEEECSCC------C-----HH-HHHHHHHHSCTTCEEEEEECSHHH
T ss_pred cccCCCCCEEEECCcc------c-----HH-HHHHHHHhcCCCcEEEEEecCccc
Confidence 3334689999987643 1 34 899999999999999998876444
No 96
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.38 E-value=5.1e-13 Score=145.46 Aligned_cols=115 Identities=19% Similarity=0.184 Sum_probs=92.5
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCC
Q 004164 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQF 130 (771)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~ 130 (771)
+...+.+.+.. .++.+|||||||+|.++..+++.|..+|+|+|+|+ +++.++++....+ ++++++++|+.++++
T Consensus 52 ~~~~i~~~~~~---~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 127 (340)
T 2fyt_A 52 YRDFIYQNPHI---FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHL 127 (340)
T ss_dssp HHHHHHHCGGG---TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC
T ss_pred HHHHHHhhhhh---cCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcC
Confidence 34445555433 46789999999999999999999877999999997 8988877765444 579999999999988
Q ss_pred CCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEE
Q 004164 131 MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFV 175 (771)
Q Consensus 131 ~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~i 175 (771)
++++||+|++....+.+.... ....++.++.++|||||+++
T Consensus 128 ~~~~~D~Ivs~~~~~~l~~~~----~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 128 PVEKVDVIISEWMGYFLLFES----MLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCSCEEEEEECCCBTTBTTTC----HHHHHHHHHHHHEEEEEEEE
T ss_pred CCCcEEEEEEcCchhhccCHH----HHHHHHHHHHhhcCCCcEEE
Confidence 888999999987544443322 25689999999999999987
No 97
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.38 E-value=2.6e-12 Score=130.24 Aligned_cols=115 Identities=17% Similarity=0.160 Sum_probs=86.0
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCC--
Q 004164 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM-- 128 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l-- 128 (771)
.+...+...+. ....++.+|||+|||+|..+..+++. +.++|+|+|+|+.+++.+.+.+.. ..++.++++|+...
T Consensus 42 ~l~~~~~~~l~-~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~-~~~v~~~~~d~~~~~~ 119 (210)
T 1nt2_A 42 KLAAMILKGHR-LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE-RNNIIPLLFDASKPWK 119 (210)
T ss_dssp HHHHHHHTSCC-CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH-CSSEEEECSCTTCGGG
T ss_pred HHHHHHHhhcc-cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc-CCCeEEEEcCCCCchh
Confidence 33344444443 23357889999999999999999887 335899999999998877766543 35789999999874
Q ss_pred --CCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 129 --QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 129 --~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
++. ++||+|++.. ..+. ....++.+++++|||||+|++..
T Consensus 120 ~~~~~-~~fD~V~~~~-----~~~~----~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 120 YSGIV-EKVDLIYQDI-----AQKN----QIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp TTTTC-CCEEEEEECC-----CSTT----HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcccc-cceeEEEEec-----cChh----HHHHHHHHHHHHhCCCCEEEEEE
Confidence 444 7999999862 1111 13456999999999999999985
No 98
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.37 E-value=1.6e-12 Score=132.85 Aligned_cols=136 Identities=11% Similarity=0.038 Sum_probs=102.1
Q ss_pred CCCHhhHHHHHh--hcCCCCccccc--cchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCC
Q 004164 25 FTSKENWDKFFT--IRGIGDSFEWY--AEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFS 100 (771)
Q Consensus 25 f~~~~yWd~~y~--~~~~~~~~ew~--~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS 100 (771)
|....+|+..|. .. ..++... ...+.+...+...+.. .++.+|||+|||+|.++..+++.+ .+|+++|+|
T Consensus 28 f~~~~~~~~~Y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~ 101 (231)
T 1vbf_A 28 FLPENLKDYAYAHTHE--ALPILPGINTTALNLGIFMLDELDL---HKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEIN 101 (231)
T ss_dssp HSCGGGGGGSSSSTTC--CEEEETTEEECCHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESC
T ss_pred cCCcchhhhccccCCC--ceeeCCCCccCCHHHHHHHHHhcCC---CCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCC
Confidence 445567776666 32 1111111 1233555566666654 578899999999999999999987 599999999
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 101 KVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 101 ~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+.+++.++++....+ +++++++|+.+....+++||+|++..+++++. .++.++|+|||++++....
T Consensus 102 ~~~~~~a~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~-------------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 102 EKMYNYASKLLSYYN-NIKLILGDGTLGYEEEKPYDRVVVWATAPTLL-------------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp HHHHHHHHHHHTTCS-SEEEEESCGGGCCGGGCCEEEEEESSBBSSCC-------------HHHHHTEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHhhcC-CeEEEECCcccccccCCCccEEEECCcHHHHH-------------HHHHHHcCCCcEEEEEEcC
Confidence 999999887775444 89999999987433467899999999998763 3688999999999998754
No 99
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.37 E-value=1.4e-12 Score=131.15 Aligned_cols=114 Identities=18% Similarity=0.119 Sum_probs=94.7
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCC
Q 004164 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSM 128 (771)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l 128 (771)
.+.....+...+.. .++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++....+ .++++..+|+.+.
T Consensus 62 ~~~~~~~~~~~l~~---~~~~~vLdiG~G~G~~~~~la~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 137 (210)
T 3lbf_A 62 QPYMVARMTELLEL---TPQSRVLEIGTGSGYQTAILAHLVQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQG 137 (210)
T ss_dssp CHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred CHHHHHHHHHhcCC---CCCCEEEEEcCCCCHHHHHHHHhCC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccC
Confidence 34555566666654 6789999999999999999999855 99999999999999987765543 5799999999987
Q ss_pred CCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 129 QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 129 ~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
..++++||+|++..+++++.+ ++.++|+|||++++....
T Consensus 138 ~~~~~~~D~i~~~~~~~~~~~-------------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 138 WQARAPFDAIIVTAAPPEIPT-------------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CGGGCCEEEEEESSBCSSCCT-------------HHHHTEEEEEEEEEEECS
T ss_pred CccCCCccEEEEccchhhhhH-------------HHHHhcccCcEEEEEEcC
Confidence 666789999999999988752 478999999999988754
No 100
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.37 E-value=1.3e-12 Score=144.46 Aligned_cols=107 Identities=16% Similarity=0.209 Sum_probs=92.9
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc--CCCeEEEEcCCHHHHHHHHHHhhcC---------CCCcEEEEeecCCC------C
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRD---------RSDMRWRVMDMTSM------Q 129 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~--g~~~V~~vDiS~~~i~~~~~~~~~~---------~~~i~~~~~D~~~l------~ 129 (771)
.++.+|||+|||+|.++..+++. ...+|+++|+|+.+++.++++.... .++++|+++|+.++ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 46789999999999999999886 2359999999999999887765322 26899999999997 8
Q ss_pred CCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 130 FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 130 ~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+++++||+|++..+++++.+. ..++++++++|||||++++.+..
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~-------~~~l~~~~r~LkpgG~l~i~~~~ 205 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNK-------LALFKEIHRVLRDGGELYFSDVY 205 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCH-------HHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCCCEEEEEEccchhcCCCH-------HHHHHHHHHHcCCCCEEEEEEec
Confidence 889999999999999998763 49999999999999999998754
No 101
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.36 E-value=2e-12 Score=127.00 Aligned_cols=119 Identities=16% Similarity=0.181 Sum_probs=95.8
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCC
Q 004164 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (771)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~ 127 (771)
...+...+...+.. .++.+|||+|||+|.++..+++.+ .+|+++|+|+.+++.++++....+ .++.+.++|+.+
T Consensus 18 ~~~~~~~~~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 93 (192)
T 1l3i_A 18 AMEVRCLIMCLAEP---GKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE 93 (192)
T ss_dssp CHHHHHHHHHHHCC---CTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH
T ss_pred hHHHHHHHHHhcCC---CCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH
Confidence 34556666666654 578899999999999999999888 699999999999998877665443 478999999877
Q ss_pred CCCCC-CCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcch
Q 004164 128 MQFMD-ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (771)
Q Consensus 128 l~~~~-~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~ 183 (771)
++++ ++||+|++.+++++ ...+++++.++|+|||++++.....+.
T Consensus 94 -~~~~~~~~D~v~~~~~~~~----------~~~~l~~~~~~l~~gG~l~~~~~~~~~ 139 (192)
T 1l3i_A 94 -ALCKIPDIDIAVVGGSGGE----------LQEILRIIKDKLKPGGRIIVTAILLET 139 (192)
T ss_dssp -HHTTSCCEEEEEESCCTTC----------HHHHHHHHHHTEEEEEEEEEEECBHHH
T ss_pred -hcccCCCCCEEEECCchHH----------HHHHHHHHHHhcCCCcEEEEEecCcch
Confidence 3333 58999999877654 358999999999999999998876433
No 102
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.36 E-value=1.2e-12 Score=139.37 Aligned_cols=110 Identities=15% Similarity=0.146 Sum_probs=87.8
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCC-------------------------------
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR------------------------------- 115 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~------------------------------- 115 (771)
++.+|||||||+|.++..++.. +..+|+|+|+|+.+++.++++.....
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 5789999999999999999987 44599999999999998877643221
Q ss_pred ----------------------------CCcEEEEeecCCCC-----CCCCCccEEEeccccccccCcccchHHHHHHHH
Q 004164 116 ----------------------------SDMRWRVMDMTSMQ-----FMDETFDVILDKGGLDALMEPELGHKLGNQYLS 162 (771)
Q Consensus 116 ----------------------------~~i~~~~~D~~~l~-----~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~ 162 (771)
.+++|.++|+...+ +.+++||+|++..+++|+.-. .+.....++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~-~~~~~~~~~l~ 204 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLN-WGDEGLKRMFR 204 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHH-HHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhc-CCHHHHHHHHH
Confidence 47999999998654 567899999999999776300 01112779999
Q ss_pred HHHHccccCeEEEEEE
Q 004164 163 EVKRLLKSGGKFVCLT 178 (771)
Q Consensus 163 ~i~rvLkpGG~~ii~~ 178 (771)
+++++|+|||+|++..
T Consensus 205 ~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 205 RIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHEEEEEEEEEEC
T ss_pred HHHHHhCCCcEEEEec
Confidence 9999999999999864
No 103
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.35 E-value=1.7e-12 Score=128.67 Aligned_cols=108 Identities=12% Similarity=0.027 Sum_probs=89.9
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCC--CCCCCccEEEecccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ--FMDETFDVILDKGGL 144 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~--~~~~sFDlVi~~~~l 144 (771)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.++++....+ .+++++++|+.++. +++++||+|++...+
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~ 123 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPY 123 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCT
T ss_pred CCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCC
Confidence 678999999999999998888887789999999999998887765444 58999999998863 457899999998776
Q ss_pred ccccCcccchHHHHHHHHHHHH--ccccCeEEEEEEcCc
Q 004164 145 DALMEPELGHKLGNQYLSEVKR--LLKSGGKFVCLTLAE 181 (771)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~~i~r--vLkpGG~~ii~~~~~ 181 (771)
++.. . ....++.++.+ +|+|||++++.+...
T Consensus 124 ~~~~-~-----~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 124 NVDS-A-----DVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp TSCH-H-----HHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred Ccch-h-----hHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 5531 1 26689999999 999999999987653
No 104
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.35 E-value=6.4e-12 Score=128.95 Aligned_cols=125 Identities=21% Similarity=0.251 Sum_probs=99.9
Q ss_pred ccccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-CC-CeEEEEcCCHHHHHHHHHHhhcCCCCcEEEE
Q 004164 45 EWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GF-HGITNVDFSKVVISDMLRRNVRDRSDMRWRV 122 (771)
Q Consensus 45 ew~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g~-~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~ 122 (771)
.|......+...+..-+.....+|+.+|||+|||+|.++..+++. |. ++|+++|+|+.|++.+++++ ...+++..+.
T Consensus 54 ~w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a-~~~~ni~~V~ 132 (233)
T 4df3_A 54 EWNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVV-RDRRNIFPIL 132 (233)
T ss_dssp ECCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHS-TTCTTEEEEE
T ss_pred eECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhh-HhhcCeeEEE
Confidence 477777777777777777667789999999999999999999987 54 78999999999999887765 4457899999
Q ss_pred eecCCC---CCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 123 MDMTSM---QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 123 ~D~~~l---~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
.|.... ++..+++|+|++..... .+ ...++.+++++|||||+++++..
T Consensus 133 ~d~~~p~~~~~~~~~vDvVf~d~~~~----~~-----~~~~l~~~~r~LKpGG~lvI~ik 183 (233)
T 4df3_A 133 GDARFPEKYRHLVEGVDGLYADVAQP----EQ-----AAIVVRNARFFLRDGGYMLMAIK 183 (233)
T ss_dssp SCTTCGGGGTTTCCCEEEEEECCCCT----TH-----HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EeccCccccccccceEEEEEEeccCC----hh-----HHHHHHHHHHhccCCCEEEEEEe
Confidence 988764 46678999998532211 11 46899999999999999988653
No 105
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.35 E-value=3e-12 Score=137.42 Aligned_cols=113 Identities=16% Similarity=0.126 Sum_probs=93.4
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhc--------CCCCcEEEEeecCCCC----CC--CC
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR--------DRSDMRWRVMDMTSMQ----FM--DE 133 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~--------~~~~i~~~~~D~~~l~----~~--~~ 133 (771)
++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.++++... ...++.++++|+.+++ ++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 5789999999999999999887666999999999999988877643 2246899999999876 54 45
Q ss_pred CccEEEeccccccc-cCcccchHHHHHHHHHHHHccccCeEEEEEEcCcchh
Q 004164 134 TFDVILDKGGLDAL-MEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHV 184 (771)
Q Consensus 134 sFDlVi~~~~l~~l-~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~~ 184 (771)
+||+|++..+++++ .+.+ ....++.+++++|+|||++++.+...+.+
T Consensus 114 ~fD~V~~~~~l~~~~~~~~----~~~~~l~~~~~~LkpgG~li~~~~~~~~l 161 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYE----QADMMLRNACERLSPGGYFIGTTPNSFEL 161 (313)
T ss_dssp CEEEEEEETCGGGGGGSHH----HHHHHHHHHHTTEEEEEEEEEEEECHHHH
T ss_pred CEEEEEEecchhhccCCHH----HHHHHHHHHHHHhCCCcEEEEecCChHHH
Confidence 99999999999987 3322 25699999999999999999998875443
No 106
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.35 E-value=1.4e-12 Score=139.43 Aligned_cols=111 Identities=14% Similarity=0.118 Sum_probs=93.9
Q ss_pred CCCCeEEEEcCCcchhHHHHH--hcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEecc
Q 004164 67 SPPPQILVPGCGNSRLSEHLY--DAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKG 142 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La--~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~ 142 (771)
.++.+|||+|||+|..+..++ ..+..+|+++|+|+.+++.++++....+ .+++++++|+.+++++ ++||+|++.+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~ 195 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNG 195 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCS
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECC
Confidence 468899999999999999985 3334599999999999999988775544 3499999999999887 9999999999
Q ss_pred ccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcc
Q 004164 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (771)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~ 182 (771)
+++++.++. ....++++++++|||||++++.++..+
T Consensus 196 ~~~~~~~~~----~~~~~l~~~~~~LkpgG~l~i~~~~~~ 231 (305)
T 3ocj_A 196 LNIYEPDDA----RVTELYRRFWQALKPGGALVTSFLTPP 231 (305)
T ss_dssp SGGGCCCHH----HHHHHHHHHHHHEEEEEEEEEECCCCC
T ss_pred hhhhcCCHH----HHHHHHHHHHHhcCCCeEEEEEecCCC
Confidence 999987654 245689999999999999999876543
No 107
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.34 E-value=4.7e-12 Score=129.34 Aligned_cols=91 Identities=14% Similarity=0.238 Sum_probs=79.3
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeec-CCCCCC-CCCccEEEecccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDM-TSMQFM-DETFDVILDKGGL 144 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~-~~l~~~-~~sFDlVi~~~~l 144 (771)
.++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++ .++++++++|+ ..++++ +++||+|++.
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~----~~~~~~~~~d~~~~~~~~~~~~fD~v~~~--- 118 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARAN----APHADVYEWNGKGELPAGLGAPFGLIVSR--- 118 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHH----CTTSEEEECCSCSSCCTTCCCCEEEEEEE---
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHh----CCCceEEEcchhhccCCcCCCCEEEEEeC---
Confidence 3678999999999999999999976 999999999999988666 46899999999 567887 8999999986
Q ss_pred ccccCcccchHHHHHHHHHHHHccccCeEEE
Q 004164 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFV 175 (771)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~i 175 (771)
.+. ..++.++.++|||||+++
T Consensus 119 ---~~~-------~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 119 ---RGP-------TSVILRLPELAAPDAHFL 139 (226)
T ss_dssp ---SCC-------SGGGGGHHHHEEEEEEEE
T ss_pred ---CCH-------HHHHHHHHHHcCCCcEEE
Confidence 222 277999999999999999
No 108
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.34 E-value=9.1e-12 Score=121.48 Aligned_cols=133 Identities=10% Similarity=0.129 Sum_probs=101.7
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCC
Q 004164 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ 129 (771)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~ 129 (771)
..+...+...+.. .++.+|||+|||+|.++..+++ +..+++++|+|+.+++.++++....+ ++++++++|+.+ +
T Consensus 21 ~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~ 95 (183)
T 2yxd_A 21 EEIRAVSIGKLNL---NKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-V 95 (183)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-H
T ss_pred HHHHHHHHHHcCC---CCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-c
Confidence 4555566666654 5778999999999999999998 45599999999999998887765544 579999999988 6
Q ss_pred CCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcchhhcchhhhh-ccCcEEEEee
Q 004164 130 FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKF-RFGWKMSVHA 202 (771)
Q Consensus 130 ~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~~~~~l~~~~-~~~w~~~~~~ 202 (771)
+++++||+|++..+ . . ...+++++.++ |||++++.+.......+ +...+ ..+|.+....
T Consensus 96 ~~~~~~D~i~~~~~----~--~-----~~~~l~~~~~~--~gG~l~~~~~~~~~~~~-~~~~l~~~g~~~~~~~ 155 (183)
T 2yxd_A 96 LDKLEFNKAFIGGT----K--N-----IEKIIEILDKK--KINHIVANTIVLENAAK-IINEFESRGYNVDAVN 155 (183)
T ss_dssp GGGCCCSEEEECSC----S--C-----HHHHHHHHHHT--TCCEEEEEESCHHHHHH-HHHHHHHTTCEEEEEE
T ss_pred ccCCCCcEEEECCc----c--c-----HHHHHHHHhhC--CCCEEEEEecccccHHH-HHHHHHHcCCeEEEEE
Confidence 77789999999877 1 1 45889999999 99999999876444322 33333 3357666543
No 109
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.34 E-value=1.7e-12 Score=141.76 Aligned_cols=105 Identities=14% Similarity=0.116 Sum_probs=88.4
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEecccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~l 144 (771)
.++.+|||+|||+|.++..+++.|..+|+|+|+|+ +++.++++....+ .+++++++|+.++++++++||+|++....
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 36789999999999999999999888999999995 9998887765544 34999999999999888999999998765
Q ss_pred ccccCcccchHHHHHHHHHHHHccccCeEEEE
Q 004164 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVC 176 (771)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii 176 (771)
+.+.... ....++.++.++|||||+++.
T Consensus 144 ~~l~~~~----~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 144 YCLFYES----MLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BTBTBTC----CHHHHHHHHHHHEEEEEEEES
T ss_pred ccccCch----hHHHHHHHHHHhCCCCCEEcc
Confidence 5553322 166899999999999999873
No 110
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.33 E-value=1.2e-11 Score=120.46 Aligned_cols=118 Identities=17% Similarity=0.197 Sum_probs=91.8
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCC-C-CcEEEEeecCC
Q 004164 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-S-DMRWRVMDMTS 127 (771)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~-~-~i~~~~~D~~~ 127 (771)
..+...+...+.. .++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.++++....+ + ++ +++.|+.+
T Consensus 11 ~~~~~~~~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~ 86 (178)
T 3hm2_A 11 QHVRALAISALAP---KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR 86 (178)
T ss_dssp HHHHHHHHHHHCC---CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG
T ss_pred HHHHHHHHHHhcc---cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh
Confidence 3445556666654 57789999999999999999887 34589999999999998887765443 3 67 88888754
Q ss_pred -CCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcch
Q 004164 128 -MQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (771)
Q Consensus 128 -l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~ 183 (771)
++..+++||+|++..++++ . .+++++.++|+|||++++.+...+.
T Consensus 87 ~~~~~~~~~D~i~~~~~~~~----~-------~~l~~~~~~L~~gG~l~~~~~~~~~ 132 (178)
T 3hm2_A 87 AFDDVPDNPDVIFIGGGLTA----P-------GVFAAAWKRLPVGGRLVANAVTVES 132 (178)
T ss_dssp GGGGCCSCCSEEEECC-TTC----T-------THHHHHHHTCCTTCEEEEEECSHHH
T ss_pred hhhccCCCCCEEEECCcccH----H-------HHHHHHHHhcCCCCEEEEEeecccc
Confidence 2332389999999888876 2 6799999999999999998876443
No 111
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.32 E-value=9.7e-12 Score=127.41 Aligned_cols=106 Identities=16% Similarity=0.255 Sum_probs=85.4
Q ss_pred hCCCCCCCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCC----CCCCCCCc
Q 004164 61 IGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTS----MQFMDETF 135 (771)
Q Consensus 61 l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~----l~~~~~sF 135 (771)
+......++.+|||+|||+|.++..+++. |..+|+++|+|+.+++.+++++... +++.++++|+.+ .++. ++|
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~ 144 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYANIV-EKV 144 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTTS-CCE
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccccC-ccE
Confidence 44333357889999999999999999987 5469999999999999887765443 789999999998 6666 789
Q ss_pred cEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEE
Q 004164 136 DVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 177 (771)
Q Consensus 136 DlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~ 177 (771)
|+|+ +++..+. ....++.++.++|+|||++++.
T Consensus 145 D~v~-----~~~~~~~----~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 145 DVIY-----EDVAQPN----QAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEE-----ECCCSTT----HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEE-----EecCChh----HHHHHHHHHHHhCCCCcEEEEE
Confidence 9999 2333332 2457899999999999999986
No 112
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.31 E-value=1.1e-11 Score=124.20 Aligned_cols=104 Identities=13% Similarity=0.166 Sum_probs=88.2
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCCCCccEEEeccccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~ 145 (771)
.++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.++++....+ .++++.++|+.+. .+++||+|++...++
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD--VDGKFDLIVANILAE 136 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT--CCSCEEEEEEESCHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc--CCCCceEEEECCcHH
Confidence 3678999999999999999998877799999999999998887765544 3499999999775 358999999987766
Q ss_pred cccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcc
Q 004164 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (771)
Q Consensus 146 ~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~ 182 (771)
+ ...+++++.++|+|||++++.++...
T Consensus 137 ~----------~~~~l~~~~~~L~~gG~l~~~~~~~~ 163 (205)
T 3grz_A 137 I----------LLDLIPQLDSHLNEDGQVIFSGIDYL 163 (205)
T ss_dssp H----------HHHHGGGSGGGEEEEEEEEEEEEEGG
T ss_pred H----------HHHHHHHHHHhcCCCCEEEEEecCcc
Confidence 5 35889999999999999999876543
No 113
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.31 E-value=4e-12 Score=128.78 Aligned_cols=109 Identities=18% Similarity=0.293 Sum_probs=91.3
Q ss_pred HHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCC--CCCCCC
Q 004164 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTS--MQFMDE 133 (771)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~--l~~~~~ 133 (771)
.+.+++. .++.+|||+|||+|.++..+++.| .+++++|+|+.+++.++++. ..+.++|+.+ .+++++
T Consensus 24 ~l~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~ 92 (230)
T 3cc8_A 24 NLLKHIK----KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL------DHVVLGDIETMDMPYEEE 92 (230)
T ss_dssp HHHTTCC----TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS------SEEEESCTTTCCCCSCTT
T ss_pred HHHHHhc----cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC------CcEEEcchhhcCCCCCCC
Confidence 3555553 367899999999999999999887 59999999999998775443 3789999987 567788
Q ss_pred CccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcc
Q 004164 134 TFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (771)
Q Consensus 134 sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~ 182 (771)
+||+|++..+++++.++ ..++.++.++|+|||++++......
T Consensus 93 ~fD~v~~~~~l~~~~~~-------~~~l~~~~~~L~~gG~l~~~~~~~~ 134 (230)
T 3cc8_A 93 QFDCVIFGDVLEHLFDP-------WAVIEKVKPYIKQNGVILASIPNVS 134 (230)
T ss_dssp CEEEEEEESCGGGSSCH-------HHHHHHTGGGEEEEEEEEEEEECTT
T ss_pred ccCEEEECChhhhcCCH-------HHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 99999999999998764 4899999999999999999876543
No 114
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.31 E-value=8.4e-12 Score=131.54 Aligned_cols=104 Identities=14% Similarity=0.192 Sum_probs=83.5
Q ss_pred CCCeEEEEcCCcch----hHHHHHhc-C----CCeEEEEcCCHHHHHHHHHHhh--------------------c---CC
Q 004164 68 PPPQILVPGCGNSR----LSEHLYDA-G----FHGITNVDFSKVVISDMLRRNV--------------------R---DR 115 (771)
Q Consensus 68 ~~~~ILDiGCG~G~----ls~~La~~-g----~~~V~~vDiS~~~i~~~~~~~~--------------------~---~~ 115 (771)
+..+|||+|||+|. ++..|++. + ..+|+|+|+|+.||+.|++..- . .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 55666664 3 1389999999999998876531 0 00
Q ss_pred ---------CCcEEEEeecCCCCCC-CCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEE
Q 004164 116 ---------SDMRWRVMDMTSMQFM-DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVC 176 (771)
Q Consensus 116 ---------~~i~~~~~D~~~l~~~-~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii 176 (771)
.++.|.+.|+.+.+++ .++||+|+|..++.++.... ..+++.++++.|+|||+|++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~-----~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTT-----QEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHH-----HHHHHHHHGGGEEEEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHH-----HHHHHHHHHHHhCCCcEEEE
Confidence 3689999999987665 57899999999999985433 67999999999999999987
No 115
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.31 E-value=8e-12 Score=130.92 Aligned_cols=108 Identities=17% Similarity=0.181 Sum_probs=90.5
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-CC-CeEEEEcCCHH------HHHHHHHHhhcCC--CCcEEEEee---cCCCCCCCC
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDA-GF-HGITNVDFSKV------VISDMLRRNVRDR--SDMRWRVMD---MTSMQFMDE 133 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~-g~-~~V~~vDiS~~------~i~~~~~~~~~~~--~~i~~~~~D---~~~l~~~~~ 133 (771)
.++.+|||||||+|.++..+++. |. .+|+++|+|+. +++.++++....+ +++++.++| ...++++++
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 121 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQ 121 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCC
Confidence 57889999999999999999987 43 59999999997 8988887775544 579999998 455677889
Q ss_pred CccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 134 TFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 134 sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
+||+|++.++++++.++. .+++.+.++++|||++++.++..
T Consensus 122 ~fD~v~~~~~l~~~~~~~-------~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 122 HFDRVVLAHSLWYFASAN-------ALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp CCSEEEEESCGGGSSCHH-------HHHHHHHHHTTTCSEEEEEEECS
T ss_pred CEEEEEEccchhhCCCHH-------HHHHHHHHHhCCCCEEEEEEecC
Confidence 999999999999987653 57777778888899999998764
No 116
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.30 E-value=7.4e-12 Score=130.99 Aligned_cols=99 Identities=24% Similarity=0.340 Sum_probs=84.4
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEecccccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~ 146 (771)
++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.++++. +++.+..+|+.++++++++||+|++..+.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~~-- 158 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY----PQVTFCVASSHRLPFSDTSMDAIIRIYAP-- 158 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC----TTSEEEECCTTSCSBCTTCEEEEEEESCC--
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcchhhCCCCCCceeEEEEeCCh--
Confidence 6789999999999999999987 2349999999999999876553 57899999999999888999999975431
Q ss_pred ccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcchh
Q 004164 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHV 184 (771)
Q Consensus 147 l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~~ 184 (771)
..+.++.++|||||++++.+....++
T Consensus 159 ------------~~l~~~~~~L~pgG~l~~~~~~~~~~ 184 (269)
T 1p91_A 159 ------------CKAEELARVVKPGGWVITATPGPRHL 184 (269)
T ss_dssp ------------CCHHHHHHHEEEEEEEEEEEECTTTT
T ss_pred ------------hhHHHHHHhcCCCcEEEEEEcCHHHH
Confidence 34899999999999999998876554
No 117
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.30 E-value=1.3e-11 Score=121.49 Aligned_cols=120 Identities=18% Similarity=0.196 Sum_probs=96.7
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC-CC--cEEEEeecCCC
Q 004164 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SD--MRWRVMDMTSM 128 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~-~~--i~~~~~D~~~l 128 (771)
.....+.+.+.. .++.+|||+|||+|.++..+++.+. +++++|+++.+++.++++....+ .+ +++.++|+.+.
T Consensus 39 ~~~~~l~~~~~~---~~~~~vLdiG~G~G~~~~~~~~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~ 114 (194)
T 1dus_A 39 KGTKILVENVVV---DKDDDILDLGCGYGVIGIALADEVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN 114 (194)
T ss_dssp HHHHHHHHHCCC---CTTCEEEEETCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT
T ss_pred hHHHHHHHHccc---CCCCeEEEeCCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc
Confidence 445566677654 5788999999999999999998844 99999999999998887765443 33 99999999884
Q ss_pred CCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcc
Q 004164 129 QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (771)
Q Consensus 129 ~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~ 182 (771)
+++++||+|++...+++.. .....+++++.++|+|||++++.+....
T Consensus 115 -~~~~~~D~v~~~~~~~~~~------~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 161 (194)
T 1dus_A 115 -VKDRKYNKIITNPPIRAGK------EVLHRIIEEGKELLKDNGEIWVVIQTKQ 161 (194)
T ss_dssp -CTTSCEEEEEECCCSTTCH------HHHHHHHHHHHHHEEEEEEEEEEEESTH
T ss_pred -cccCCceEEEECCCcccch------hHHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 4567999999987766511 1266899999999999999999987743
No 118
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.30 E-value=9.4e-12 Score=145.55 Aligned_cols=117 Identities=15% Similarity=0.122 Sum_probs=97.2
Q ss_pred HHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCC--CeEEEEcCCHHHHHHHHHHhhc-------CCCCcEEEEeec
Q 004164 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF--HGITNVDFSKVVISDMLRRNVR-------DRSDMRWRVMDM 125 (771)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~--~~V~~vDiS~~~i~~~~~~~~~-------~~~~i~~~~~D~ 125 (771)
..+.+++.. .++.+|||||||+|.++..|++.+. .+|+|+|+|+.+++.++++... ..++++|+++|+
T Consensus 711 e~LLelL~~---~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa 787 (950)
T 3htx_A 711 EYALKHIRE---SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI 787 (950)
T ss_dssp HHHHHHHHH---SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT
T ss_pred HHHHHHhcc---cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch
Confidence 345555543 4678999999999999999999862 5999999999999998775431 235799999999
Q ss_pred CCCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 126 TSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 126 ~~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
.++++.+++||+|++..+++|+.++. ...+++++.++|||| .+++.+..
T Consensus 788 ~dLp~~d~sFDlVV~~eVLeHL~dp~-----l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 788 LEFDSRLHDVDIGTCLEVIEHMEEDQ-----ACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp TSCCTTSCSCCEEEEESCGGGSCHHH-----HHHHHHHHHHTTCCS-EEEEEECB
T ss_pred HhCCcccCCeeEEEEeCchhhCChHH-----HHHHHHHHHHHcCCC-EEEEEecC
Confidence 99999999999999999999987654 567999999999999 77777755
No 119
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.30 E-value=1.7e-11 Score=129.58 Aligned_cols=121 Identities=12% Similarity=0.059 Sum_probs=96.7
Q ss_pred cccccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEE
Q 004164 44 FEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWR 121 (771)
Q Consensus 44 ~ew~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~ 121 (771)
+.|+......+..+..++. ++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.+++.+...+ .+++++
T Consensus 106 ~~f~~~~~~~~~~l~~~~~-----~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~ 180 (278)
T 2frn_A 106 IMFSPANVKERVRMAKVAK-----PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAY 180 (278)
T ss_dssp SCCCGGGHHHHHHHHHHCC-----TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred eeEcCCcHHHHHHHHHhCC-----CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEE
Confidence 3455555555666666653 688999999999999999999877579999999999998877665443 348999
Q ss_pred EeecCCCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 122 VMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 122 ~~D~~~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
++|+.++.. +++||+|++..... ...++.++.++|+|||++++.+...
T Consensus 181 ~~D~~~~~~-~~~fD~Vi~~~p~~-----------~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 181 NMDNRDFPG-ENIADRILMGYVVR-----------THEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp CSCTTTCCC-CSCEEEEEECCCSS-----------GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ECCHHHhcc-cCCccEEEECCchh-----------HHHHHHHHHHHCCCCeEEEEEEeec
Confidence 999999876 68999999853311 2377999999999999999988874
No 120
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.29 E-value=8e-12 Score=125.50 Aligned_cols=106 Identities=13% Similarity=0.095 Sum_probs=85.8
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC---CCcEEEEeecCCCCC--CCCC-ccEEEec
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR---SDMRWRVMDMTSMQF--MDET-FDVILDK 141 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~---~~i~~~~~D~~~l~~--~~~s-FDlVi~~ 141 (771)
++.+|||+|||+|.++..++..+..+|+++|+|+.+++.+++++...+ ++++++++|+.++.. .+++ ||+|++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 568999999999999999888877799999999999999887765554 479999999987532 3678 9999987
Q ss_pred cccccccCcccchHHHHHHHHHH--HHccccCeEEEEEEcCc
Q 004164 142 GGLDALMEPELGHKLGNQYLSEV--KRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 142 ~~l~~l~~~~~~~~~~~~~l~~i--~rvLkpGG~~ii~~~~~ 181 (771)
..++ . .. ...++..+ .++|+|||++++.....
T Consensus 133 ~~~~-~--~~-----~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PPFH-F--NL-----AEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSS-S--CH-----HHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCC-C--cc-----HHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 7643 1 11 45778888 67899999999887653
No 121
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.28 E-value=9.3e-12 Score=128.41 Aligned_cols=115 Identities=13% Similarity=0.066 Sum_probs=84.4
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhc-------CCCCcEEEEeecCC-CC--CCCCCc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-------DRSDMRWRVMDMTS-MQ--FMDETF 135 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~-------~~~~i~~~~~D~~~-l~--~~~~sF 135 (771)
.++.+|||||||+|.++..|+.. +..+|+|+|+|+.+++.++++... ...++.++++|+.+ ++ +++++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 35679999999999999999987 345899999999999988765432 23689999999987 66 778999
Q ss_pred cEEEeccccccccCcccc-hHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 136 DVILDKGGLDALMEPELG-HKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 136 DlVi~~~~l~~l~~~~~~-~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
|.|+....-.+....... ......+++++.++|||||.|++.+...
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~ 171 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVL 171 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCH
Confidence 999864332221100000 0001479999999999999999988653
No 122
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.28 E-value=2.6e-11 Score=122.63 Aligned_cols=113 Identities=16% Similarity=0.146 Sum_probs=87.9
Q ss_pred CCCeEEEEcCCcchhHHHHHhcC-CCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCC--CCCCCccEEEeccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ--FMDETFDVILDKGG 143 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g-~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~--~~~~sFDlVi~~~~ 143 (771)
++.+|||||||+|.++..++... ..+++|+|+|+.+++.++++....+ .++.++++|+.+++ +++++||+|++...
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 57899999999999999999873 3599999999999998887765444 68999999999876 77889999998754
Q ss_pred cccccCcccc-hHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 144 LDALMEPELG-HKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 144 l~~l~~~~~~-~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
..+....... ......++.++.++|+|||++++.+..
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN 158 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 3321100000 001357999999999999999998754
No 123
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.28 E-value=2e-11 Score=125.07 Aligned_cols=124 Identities=18% Similarity=0.276 Sum_probs=91.6
Q ss_pred cccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEe
Q 004164 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVM 123 (771)
Q Consensus 46 w~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~ 123 (771)
|..........+...+......++.+|||+|||+|.++..|++. | ..+|+++|+|+.+++.+.+.+... ++++++++
T Consensus 55 ~~~~~~~~~~~~~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~ 133 (233)
T 2ipx_A 55 WNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIE 133 (233)
T ss_dssp CCTTTCHHHHHHHTTCSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECS
T ss_pred ecccchhHHHHHHhHHheecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEc
Confidence 44433333334444344433467889999999999999999987 3 369999999999988887666443 78999999
Q ss_pred ecCC---CCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 124 DMTS---MQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 124 D~~~---l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
|+.+ +++.+++||+|++... .++ ....++.++.++|||||++++...
T Consensus 134 d~~~~~~~~~~~~~~D~V~~~~~-----~~~----~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 134 DARHPHKYRMLIAMVDVIFADVA-----QPD----QTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp CTTCGGGGGGGCCCEEEEEECCC-----CTT----HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccCChhhhcccCCcEEEEEEcCC-----Ccc----HHHHHHHHHHHHcCCCeEEEEEEc
Confidence 9988 4456789999998543 222 134678899999999999999544
No 124
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.28 E-value=3.3e-11 Score=117.67 Aligned_cols=120 Identities=13% Similarity=0.176 Sum_probs=88.1
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEeccccccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDAL 147 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l 147 (771)
++.+|||+|||+|.++..+++.+ +|+|+|+|+.+++. ..+++++++|+.+ ++++++||+|+++..+++.
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~--------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~ 91 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES--------HRGGNLVRADLLC-SINQESVDVVVFNPPYVPD 91 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT--------CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTT
T ss_pred CCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc--------ccCCeEEECChhh-hcccCCCCEEEECCCCccC
Confidence 56799999999999999999987 99999999998874 4579999999988 6667899999998888765
Q ss_pred cCcc--cchHHHHHHHHHHHHccccCeEEEEEEcCcchhhcchhhhh-ccCcEEEE
Q 004164 148 MEPE--LGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKF-RFGWKMSV 200 (771)
Q Consensus 148 ~~~~--~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~~~~~l~~~~-~~~w~~~~ 200 (771)
.+.. .+......++.++.+.| |||+++++...... ...+...+ ..+|....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~-~~~l~~~l~~~gf~~~~ 145 (170)
T 3q87_B 92 TDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANR-PKEVLARLEERGYGTRI 145 (170)
T ss_dssp CCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGC-HHHHHHHHHHTTCEEEE
T ss_pred CccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCC-HHHHHHHHHHCCCcEEE
Confidence 4430 00000236788888888 99999998755322 12232333 33666543
No 125
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.28 E-value=1.5e-11 Score=135.71 Aligned_cols=111 Identities=14% Similarity=0.147 Sum_probs=94.3
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEeccccccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDAL 147 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l 147 (771)
++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.+++.....+.+++++++|+.+...++++||+|+++..+++.
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~ 311 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVG 311 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTT
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhc
Confidence 678999999999999999999876 9999999999999998877666667999999999987777899999999888863
Q ss_pred cCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 148 MEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 148 ~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
.... ......++.++.++|+|||+++++....
T Consensus 312 ~~~~--~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 312 GAVI--LDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp CSSC--CHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred cccc--HHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 2211 1236799999999999999999987653
No 126
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.28 E-value=1.8e-11 Score=120.64 Aligned_cols=118 Identities=15% Similarity=0.178 Sum_probs=92.5
Q ss_pred cchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecC
Q 004164 48 AEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMT 126 (771)
Q Consensus 48 ~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~ 126 (771)
..+..+...+..++. +..+|||+|||+|.++..++.. +..+|+++|+|+.|++.+++++...+....+...|..
T Consensus 34 p~ld~fY~~~~~~l~-----~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~ 108 (200)
T 3fzg_A 34 ATLNDFYTYVFGNIK-----HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKE 108 (200)
T ss_dssp GGHHHHHHHHHHHSC-----CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCH
T ss_pred HhHHHHHHHHHhhcC-----CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccc
Confidence 445555566666663 5789999999999999999877 3349999999999999998887766655445556765
Q ss_pred CCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 127 SMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 127 ~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
.. .+.++||+|+...++|++.+. +..+..+.+.|+|||.||-..
T Consensus 109 ~~-~~~~~~DvVLa~k~LHlL~~~-------~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 109 SD-VYKGTYDVVFLLKMLPVLKQQ-------DVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HH-HTTSEEEEEEEETCHHHHHHT-------TCCHHHHHHTCEEEEEEEEEE
T ss_pred cc-CCCCCcChhhHhhHHHhhhhh-------HHHHHHHHHHhCCCCEEEEeC
Confidence 54 456889999999999999332 355679999999999998876
No 127
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.28 E-value=1.7e-11 Score=124.32 Aligned_cols=113 Identities=11% Similarity=0.105 Sum_probs=87.0
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCC--CCCCCccEEEeccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ--FMDETFDVILDKGG 143 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~--~~~~sFDlVi~~~~ 143 (771)
++.+|||||||+|.++..|++. +..+|+|+|+|+.+++.++++....+ .++.++++|+.+++ +++++||.|+....
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 5789999999999999999987 33599999999999999887765544 57999999999875 77889999986543
Q ss_pred cccccCcccc-hHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 144 LDALMEPELG-HKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 144 l~~l~~~~~~-~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
..+....... ......+++++.++|+|||.+++.+..
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC
Confidence 3221110000 000258899999999999999998854
No 128
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.27 E-value=7.2e-13 Score=136.40 Aligned_cols=142 Identities=10% Similarity=0.108 Sum_probs=102.9
Q ss_pred CCCHhhHHHHHhhcCC-CCcc-----ccccch-hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEE
Q 004164 25 FTSKENWDKFFTIRGI-GDSF-----EWYAEW-PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNV 97 (771)
Q Consensus 25 f~~~~yWd~~y~~~~~-~~~~-----ew~~~~-~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~v 97 (771)
.....||++.+..... ...+ .|+... ..+...+...+.. ..++.+|||+|||+|.++..+++.+ .+|+++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~vLD~gcG~G~~~~~la~~~-~~v~~v 106 (241)
T 3gdh_A 30 PELAKYWAQRYRLFSRFDDGIKLDREGWFSVTPEKIAEHIAGRVSQ--SFKCDVVVDAFCGVGGNTIQFALTG-MRVIAI 106 (241)
T ss_dssp GGGHHHHHTHHHHCTTGGGTCCCCHHHHHHCCCHHHHHHHHHHHHH--HSCCSEEEETTCTTSHHHHHHHHTT-CEEEEE
T ss_pred HHHHHHHHhhhhhHhhccCCceecccceeecCHHHHHHHHHHHhhh--ccCCCEEEECccccCHHHHHHHHcC-CEEEEE
Confidence 3457799987765420 0011 232221 2223444444321 0267899999999999999999988 499999
Q ss_pred cCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEE
Q 004164 98 DFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFV 175 (771)
Q Consensus 98 DiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~i 175 (771)
|+|+.+++.+++++...+ ++++++++|+.+++ ++++||+|++...+++..... ..+.+++++|+|||+++
T Consensus 107 D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~~~~~~-------~~~~~~~~~L~pgG~~i 178 (241)
T 3gdh_A 107 DIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWGGPDYAT-------AETFDIRTMMSPDGFEI 178 (241)
T ss_dssp ESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCSSGGGGG-------SSSBCTTTSCSSCHHHH
T ss_pred ECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcCCcchhh-------hHHHHHHhhcCCcceeH
Confidence 999999999987776555 47999999999876 568999999998888865443 35778999999999966
Q ss_pred EE
Q 004164 176 CL 177 (771)
Q Consensus 176 i~ 177 (771)
+.
T Consensus 179 ~~ 180 (241)
T 3gdh_A 179 FR 180 (241)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 129
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.27 E-value=3.4e-11 Score=127.08 Aligned_cols=108 Identities=15% Similarity=0.075 Sum_probs=89.8
Q ss_pred CCCeEEEEcCCc---chhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC-----------CCC
Q 004164 68 PPPQILVPGCGN---SRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ-----------FMD 132 (771)
Q Consensus 68 ~~~~ILDiGCG~---G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~-----------~~~ 132 (771)
+..+|||||||+ |.++..+.+. ...+|+++|+|+.|++.+++++. ..++++|+++|+.+.+ ++.
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLA-KDPNTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHT-TCTTEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcC-CCCCeEEEEeeCCCchhhhccchhhccCCC
Confidence 457999999999 9888766664 23599999999999998887763 3468999999997631 333
Q ss_pred CCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 133 ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 133 ~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
.+||+|++.+++|++.+.+ ...+|++++++|+|||+|++.++..
T Consensus 156 ~~~d~v~~~~vlh~~~d~~-----~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 156 SRPAAIMLVGMLHYLSPDV-----VDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp TSCCEEEETTTGGGSCTTT-----HHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCEEEEEechhhhCCcHH-----HHHHHHHHHHhCCCCcEEEEEEecC
Confidence 5899999999999998754 5699999999999999999998764
No 130
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.27 E-value=1.8e-11 Score=126.19 Aligned_cols=101 Identities=16% Similarity=0.078 Sum_probs=83.1
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCC---CCCccEEEecc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFM---DETFDVILDKG 142 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~---~~sFDlVi~~~ 142 (771)
++.+|||+|||+|..+..++.. +..+|+++|+|+.+++.+++.....+ .+++++++|+.++++. +++||+|++..
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec
Confidence 5789999999999999999864 33589999999999998877654433 4699999999887754 57999999865
Q ss_pred ccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
. .+ ...+++++.++|+|||++++..-
T Consensus 150 ~----~~-------~~~~l~~~~~~LkpgG~l~~~~g 175 (240)
T 1xdz_A 150 V----AR-------LSVLSELCLPLVKKNGLFVALKA 175 (240)
T ss_dssp C----SC-------HHHHHHHHGGGEEEEEEEEEEEC
T ss_pred c----CC-------HHHHHHHHHHhcCCCCEEEEEeC
Confidence 2 22 46999999999999999998753
No 131
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.26 E-value=1e-11 Score=121.36 Aligned_cols=122 Identities=13% Similarity=0.135 Sum_probs=92.0
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC-
Q 004164 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM- 128 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l- 128 (771)
.+...+...+.. ..++.+|||+|||+|.++..++..+..+|+++|+|+.+++.++++....+ .++.++++|+.+.
T Consensus 17 ~~~~~~~~~l~~--~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 94 (177)
T 2esr_A 17 KVRGAIFNMIGP--YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAI 94 (177)
T ss_dssp -CHHHHHHHHCS--CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHH
T ss_pred HHHHHHHHHHHh--hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhH
Confidence 344556666642 14678999999999999999998876799999999999998887765544 3689999999873
Q ss_pred CCCCCCccEEEeccccccccCcccchHHHHHHHHHHH--HccccCeEEEEEEcCcch
Q 004164 129 QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVK--RLLKSGGKFVCLTLAESH 183 (771)
Q Consensus 129 ~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~--rvLkpGG~~ii~~~~~~~ 183 (771)
+..+++||+|++...++.. .....+..+. ++|+|||++++.......
T Consensus 95 ~~~~~~fD~i~~~~~~~~~--------~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 95 DCLTGRFDLVFLDPPYAKE--------TIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp HHBCSCEEEEEECCSSHHH--------HHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred HhhcCCCCEEEECCCCCcc--------hHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 4445679999987654321 1346677776 999999999998766433
No 132
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.26 E-value=8.4e-12 Score=127.23 Aligned_cols=116 Identities=15% Similarity=0.065 Sum_probs=88.6
Q ss_pred CCCeEEEEcCCcchhHHHHHhcC-CCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCC-C--CCCCCccEEEecc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSM-Q--FMDETFDVILDKG 142 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g-~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l-~--~~~~sFDlVi~~~ 142 (771)
++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.++++....+ .++.++++|+.++ + +++++||.|++..
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 57899999999999999999874 3589999999999999987765544 5799999999884 3 7789999999764
Q ss_pred ccccccCcccc-hHHHHHHHHHHHHccccCeEEEEEEcCcch
Q 004164 143 GLDALMEPELG-HKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (771)
Q Consensus 143 ~l~~l~~~~~~-~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~ 183 (771)
...+....... ......+++++.++|||||+|++.+.....
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~ 155 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPY 155 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHH
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHH
Confidence 43332111100 000125899999999999999999866433
No 133
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.26 E-value=1.1e-11 Score=125.19 Aligned_cols=138 Identities=13% Similarity=0.020 Sum_probs=101.3
Q ss_pred CCCHhhHHHHHhhcCCCCcccccc--chhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcC-C-CeEEEEcCC
Q 004164 25 FTSKENWDKFFTIRGIGDSFEWYA--EWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-F-HGITNVDFS 100 (771)
Q Consensus 25 f~~~~yWd~~y~~~~~~~~~ew~~--~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g-~-~~V~~vDiS 100 (771)
|....+|+..|... ...+.+.. ..+.+...+...+.. .++.+|||+|||+|.++..+++.+ . .+|+++|+|
T Consensus 37 ~~~~~~~~~~y~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~ 111 (215)
T 2yxe_A 37 FLPEHLKEYAYVDT--PLEIGYGQTISAIHMVGMMCELLDL---KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERI 111 (215)
T ss_dssp GSCGGGGGGTTSCS--CEEEETTEEECCHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESC
T ss_pred cCCchhhhhcccCC--CccCCCCcEeCcHHHHHHHHHhhCC---CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCC
Confidence 55566777766543 11221111 224455556666654 578899999999999999999874 2 599999999
Q ss_pred HHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 101 KVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 101 ~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
+.+++.++++....+ .++.+.++|+......+++||+|++..+++++. .++.++|+|||++++...
T Consensus 112 ~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~-------------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 112 PELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTAAGPKIP-------------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESSBBSSCC-------------HHHHHTEEEEEEEEEEES
T ss_pred HHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECCchHHHH-------------HHHHHHcCCCcEEEEEEC
Confidence 999998887764433 569999999865332367899999999998763 478999999999999875
Q ss_pred C
Q 004164 180 A 180 (771)
Q Consensus 180 ~ 180 (771)
.
T Consensus 179 ~ 179 (215)
T 2yxe_A 179 R 179 (215)
T ss_dssp S
T ss_pred C
Confidence 4
No 134
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.26 E-value=1.6e-11 Score=135.37 Aligned_cols=106 Identities=16% Similarity=0.087 Sum_probs=89.4
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEecccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~l 144 (771)
.++.+|||||||+|.++..+++.|..+|+|+|+| .+++.++++....+ .+++++++|+.+++++ ++||+|++..+.
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMG 139 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCB
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChh
Confidence 5788999999999999999999988899999999 89998877765544 4599999999998877 899999997766
Q ss_pred ccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
+.+.... ....++.++.++|||||++++..
T Consensus 140 ~~l~~e~----~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 140 YFLLRES----MFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp TTBTTTC----THHHHHHHHHHHEEEEEEEESSE
T ss_pred hcccchH----HHHHHHHHHHhhCCCCeEEEEec
Confidence 6654322 15689999999999999998654
No 135
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.25 E-value=2.9e-11 Score=130.92 Aligned_cols=104 Identities=17% Similarity=0.151 Sum_probs=86.8
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEeccccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~ 145 (771)
++.+|||+|||+|.++..+++.|..+|+++|+| .+++.++++....+ .+++++.+|+.++++++++||+|++....+
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGY 116 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBT
T ss_pred CCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchh
Confidence 578999999999999999999887799999999 58888877765443 469999999999988888999999986656
Q ss_pred cccCcccchHHHHHHHHHHHHccccCeEEEE
Q 004164 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVC 176 (771)
Q Consensus 146 ~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii 176 (771)
.+.... ....++.++.++|+|||+++.
T Consensus 117 ~l~~~~----~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 117 FLLYES----MMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TBSTTC----CHHHHHHHHHHHEEEEEEEES
T ss_pred hcccHH----HHHHHHHHHHhhcCCCeEEEE
Confidence 554322 156889999999999999873
No 136
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.25 E-value=8.8e-11 Score=121.63 Aligned_cols=118 Identities=18% Similarity=0.247 Sum_probs=94.2
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcC--CCCcEEEEeecC
Q 004164 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRD--RSDMRWRVMDMT 126 (771)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~--~~~i~~~~~D~~ 126 (771)
+.....+...+.. .++.+|||+|||+|.++..+++. + ..+|+++|+++.+++.+++..... .+++.+.++|+.
T Consensus 82 ~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~ 158 (258)
T 2pwy_A 82 PKDASAMVTLLDL---APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLE 158 (258)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGG
T ss_pred chHHHHHHHHcCC---CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchh
Confidence 3333445555543 57889999999999999999987 4 459999999999999888776443 367999999999
Q ss_pred CCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcch
Q 004164 127 SMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (771)
Q Consensus 127 ~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~ 183 (771)
+.++++++||+|++. ..++. .++.++.++|+|||++++.+...+.
T Consensus 159 ~~~~~~~~~D~v~~~-----~~~~~-------~~l~~~~~~L~~gG~l~~~~~~~~~ 203 (258)
T 2pwy_A 159 EAELEEAAYDGVALD-----LMEPW-------KVLEKAALALKPDRFLVAYLPNITQ 203 (258)
T ss_dssp GCCCCTTCEEEEEEE-----SSCGG-------GGHHHHHHHEEEEEEEEEEESCHHH
T ss_pred hcCCCCCCcCEEEEC-----CcCHH-------HHHHHHHHhCCCCCEEEEEeCCHHH
Confidence 887888899999972 23322 7899999999999999999876433
No 137
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.25 E-value=1.9e-11 Score=133.52 Aligned_cols=115 Identities=17% Similarity=0.129 Sum_probs=92.8
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCC
Q 004164 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQF 130 (771)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~ 130 (771)
+...+.+.+.. .++.+|||||||+|.++..+++.|..+|+++|+|+ +++.++++....+ ++++++.+|+.++++
T Consensus 38 y~~~i~~~l~~---~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~ 113 (348)
T 2y1w_A 38 YQRAILQNHTD---FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL 113 (348)
T ss_dssp HHHHHHHTGGG---TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC
T ss_pred HHHHHHhcccc---CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCC
Confidence 33445555443 47789999999999999999998877999999997 7777776665444 579999999999876
Q ss_pred CCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEE
Q 004164 131 MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 177 (771)
Q Consensus 131 ~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~ 177 (771)
+ ++||+|++...++++.... ....+.+++++|||||++++.
T Consensus 114 ~-~~~D~Ivs~~~~~~~~~~~-----~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 114 P-EQVDIIISEPMGYMLFNER-----MLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp S-SCEEEEEECCCBTTBTTTS-----HHHHHHHGGGGEEEEEEEESC
T ss_pred C-CceeEEEEeCchhcCChHH-----HHHHHHHHHhhcCCCeEEEEe
Confidence 5 6899999998888776544 557788999999999999854
No 138
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.25 E-value=3.5e-11 Score=121.38 Aligned_cols=129 Identities=22% Similarity=0.362 Sum_probs=95.4
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEecccccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~ 146 (771)
.++.+|||+|||+|.++..++ .+|+++|+|+. ++.+.++|+.++++++++||+|++..++++
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~--------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 127 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL--------------DPRVTVCDMAQVPLEDESVDVAVFCLSLMG 127 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS--------------STTEEESCTTSCSCCTTCEEEEEEESCCCS
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC--------------CceEEEeccccCCCCCCCEeEEEEehhccc
Confidence 367899999999999998773 48999999995 578899999999988899999999999974
Q ss_pred ccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcch-hhcchhhhh-ccCcEEEEeecCCCCCCCCCCccEEEEEEEcC
Q 004164 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH-VLGLLFPKF-RFGWKMSVHAIPQKSSSEPSLQTFMVVADKEN 224 (771)
Q Consensus 147 l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~-~~~~l~~~~-~~~w~~~~~~i~~~~~~~~~l~~f~~v~~k~~ 224 (771)
.+ ...++.++.++|+|||++++.++.... ....+...+ ..+|.+...... .-..+.++++|..
T Consensus 128 -~~-------~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~-------~~~~~~~~~~k~~ 192 (215)
T 2zfu_A 128 -TN-------IRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLT-------NSHFFLFDFQKTG 192 (215)
T ss_dssp -SC-------HHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEECC-------STTCEEEEEEECS
T ss_pred -cC-------HHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEecC-------CCeEEEEEEEecC
Confidence 32 469999999999999999999876432 122233333 346665443321 1234777777765
Q ss_pred Cccc
Q 004164 225 SSVV 228 (771)
Q Consensus 225 ~~~~ 228 (771)
....
T Consensus 193 ~~~~ 196 (215)
T 2zfu_A 193 PPLV 196 (215)
T ss_dssp SCSS
T ss_pred cccc
Confidence 5443
No 139
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.25 E-value=1.5e-11 Score=130.21 Aligned_cols=162 Identities=15% Similarity=0.100 Sum_probs=103.1
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
..+.+||+||+|+|.++..+....+..+|++||+||.+++.|++.+ |+ ++++++.+|+.++ .
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl---~~v~~v~gDa~~l----~-------- 185 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV---DGVNVITGDETVI----D-------- 185 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC---CSEEEEESCGGGG----G--------
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC---CCeEEEECchhhC----C--------
Confidence 5678999999998866655445556789999999999999999986 65 6899999999875 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhH
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQAT 696 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~ 696 (771)
+..||+|+++.... --..+++.+.+.|+|||.|+++........
T Consensus 186 -----------------------d~~FDvV~~~a~~~-------------d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~ 229 (298)
T 3fpf_A 186 -----------------------GLEFDVLMVAALAE-------------PKRRVFRNIHRYVDTETRIIYRTYTGMRAI 229 (298)
T ss_dssp -----------------------GCCCSEEEECTTCS-------------CHHHHHHHHHHHCCTTCEEEEEECCGGGGG
T ss_pred -----------------------CCCcCEEEECCCcc-------------CHHHHHHHHHHHcCCCcEEEEEcCcchhhh
Confidence 15699999854321 126899999999999999999875432221
Q ss_pred -HHHHHHHHHHhccceEEeee-cCCccEEEEEecCCCcCCCCCHHHHHHHHhhhhcCC
Q 004164 697 -KDMVISRMKMVFNHLFCLQL-EEDVNLVLFGLSSESCIKDNSFPEAAVQLGKLVKFQ 752 (771)
Q Consensus 697 -~~~v~~~l~~vF~~v~~~~~-~~~~N~Vl~a~~~~~~~~~~~l~~~a~~l~~~~~~~ 752 (771)
...+.....+.|..+..... ++-.|.|+||++...+.-.+.+-+-.++=+.+++|+
T Consensus 230 l~~~v~~~~~~gf~~~~~~~p~~~v~N~vv~a~k~~~~~~~~~~~~~~~~~~~~~~~~ 287 (298)
T 3fpf_A 230 LYAPVSDDDITGFRRAGVVLPSGKVNNTSVLVFKCPDKGELNSKLEGKPIPNPLLGLD 287 (298)
T ss_dssp SSCCCCTGGGTTEEEEEEECCCTTCCCEEEEEEECC----------------------
T ss_pred ccccCChhhhhhhhheeEECCCCCcCcEEEEEEccCCchHHHHHHhcccCCcceeccc
Confidence 11112334457776665544 344799999988875433333444444444455544
No 140
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.25 E-value=1.7e-11 Score=134.40 Aligned_cols=116 Identities=16% Similarity=0.121 Sum_probs=90.1
Q ss_pred HHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhh-------c---CCCCcEEEEee
Q 004164 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNV-------R---DRSDMRWRVMD 124 (771)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~-------~---~~~~i~~~~~D 124 (771)
.+...+.. .++.+|||||||+|.++..++.. +..+++|||+|+.+++.+++... . ...+++|+++|
T Consensus 164 ~il~~l~l---~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD 240 (438)
T 3uwp_A 164 QMIDEIKM---TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD 240 (438)
T ss_dssp HHHHHHCC---CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECC
T ss_pred HHHHhcCC---CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECc
Confidence 34444443 68899999999999999999865 66579999999999987765321 1 12579999999
Q ss_pred cCCCCCCC--CCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcc
Q 004164 125 MTSMQFMD--ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (771)
Q Consensus 125 ~~~l~~~~--~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~ 182 (771)
+.++++.+ ..||+|+++.+++. ++ ....|.+++++|||||+|++.+...+
T Consensus 241 ~~~lp~~d~~~~aDVVf~Nn~~F~---pd-----l~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 241 FLSEEWRERIANTSVIFVNNFAFG---PE-----VDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp TTSHHHHHHHHTCSEEEECCTTCC---HH-----HHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred ccCCccccccCCccEEEEcccccC---ch-----HHHHHHHHHHcCCCCcEEEEeecccC
Confidence 99988754 47999999876532 22 56888999999999999999876533
No 141
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.24 E-value=9.7e-12 Score=122.16 Aligned_cols=125 Identities=15% Similarity=0.149 Sum_probs=94.1
Q ss_pred chhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecC
Q 004164 49 EWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMT 126 (771)
Q Consensus 49 ~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~ 126 (771)
....+...+..++.. ..++.+|||+|||+|.++..++..+..+|+++|+|+.+++.+++.....+ ++++++++|+.
T Consensus 27 ~~~~~~~~~~~~l~~--~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 104 (187)
T 2fhp_A 27 TTDKVKESIFNMIGP--YFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN 104 (187)
T ss_dssp CCHHHHHHHHHHHCS--CCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred CHHHHHHHHHHHHHh--hcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHH
Confidence 344556666666642 13678999999999999999988876799999999999998877665443 46999999998
Q ss_pred CCC----CCCCCccEEEeccccccccCcccchHHHHHHHHHH--HHccccCeEEEEEEcCcch
Q 004164 127 SMQ----FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEV--KRLLKSGGKFVCLTLAESH 183 (771)
Q Consensus 127 ~l~----~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i--~rvLkpGG~~ii~~~~~~~ 183 (771)
+.. +++++||+|++...++. .. ....+..+ .++|+|||++++.......
T Consensus 105 ~~~~~~~~~~~~fD~i~~~~~~~~-~~-------~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 105 RALEQFYEEKLQFDLVLLDPPYAK-QE-------IVSQLEKMLERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp HHHHHHHHTTCCEEEEEECCCGGG-CC-------HHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred HHHHHHHhcCCCCCEEEECCCCCc-hh-------HHHHHHHHHHhcccCCCCEEEEEeCCccc
Confidence 742 23678999998876442 22 33666666 8999999999988765433
No 142
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.24 E-value=1.6e-10 Score=120.45 Aligned_cols=122 Identities=15% Similarity=0.066 Sum_probs=91.6
Q ss_pred HHHHhhCCCCCC-CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCC--C
Q 004164 56 PLISLIGAPTSS-PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ--F 130 (771)
Q Consensus 56 ~l~~~l~~~~~~-~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~--~ 130 (771)
.+..++.. . ++.+|||+|||+|.++..+++.+..+|+++|+++.+++.+++.....+ .+++++++|+.+++ +
T Consensus 39 ll~~~~~~---~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~ 115 (259)
T 3lpm_A 39 LLAKFSYL---PIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLI 115 (259)
T ss_dssp HHHHHCCC---CSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTS
T ss_pred HHHHHhcC---CCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhh
Confidence 34455543 5 688999999999999999999866699999999999998877765444 36999999999875 5
Q ss_pred CCCCccEEEeccccccc-----cCccc--------chHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 131 MDETFDVILDKGGLDAL-----MEPEL--------GHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 131 ~~~sFDlVi~~~~l~~l-----~~~~~--------~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
++++||+|+++..+... ..+.. .......++..+.++|+|||+++++...
T Consensus 116 ~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 178 (259)
T 3lpm_A 116 PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP 178 (259)
T ss_dssp CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH
Confidence 57899999997655433 11100 0012568999999999999999997643
No 143
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.23 E-value=3e-12 Score=142.92 Aligned_cols=116 Identities=17% Similarity=0.190 Sum_probs=88.8
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCC
Q 004164 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMD 132 (771)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~ 132 (771)
+...+...+. ..++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.++++.. ......+...+...+++++
T Consensus 95 ~~~~l~~~~~---~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~~~~~~l~~~~ 169 (416)
T 4e2x_A 95 LARDFLATEL---TGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREKGI-RVRTDFFEKATADDVRRTE 169 (416)
T ss_dssp HHHHHHHTTT---CSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTTTC-CEECSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHhC---CCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHcCC-CcceeeechhhHhhcccCC
Confidence 3334444443 25788999999999999999999888 99999999999987765411 0011123344555566778
Q ss_pred CCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 133 ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 133 ~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
++||+|++.++++|+.+ ...++++++++|||||++++....
T Consensus 170 ~~fD~I~~~~vl~h~~d-------~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 170 GPANVIYAANTLCHIPY-------VQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp CCEEEEEEESCGGGCTT-------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCEEEEEECChHHhcCC-------HHHHHHHHHHHcCCCeEEEEEeCC
Confidence 99999999999999975 459999999999999999987644
No 144
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.23 E-value=7.1e-11 Score=117.70 Aligned_cols=106 Identities=13% Similarity=0.170 Sum_probs=81.2
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-C--CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC--------------
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDA-G--FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ-------------- 129 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~-g--~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~-------------- 129 (771)
.++.+|||+|||+|.++..+++. + ..+|+|+|+|+.+ ..++++++++|+.+.+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~ 90 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------PIPNVYFIQGEIGKDNMNNIKNINYIDNMN 90 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------CCTTCEEEECCTTTTSSCCC----------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------CCCCceEEEccccchhhhhhcccccccccc
Confidence 46789999999999999999986 3 3589999999921 2357999999998876
Q ss_pred -----------CCCCCccEEEeccccccccCcccc----hHHHHHHHHHHHHccccCeEEEEEEcCcc
Q 004164 130 -----------FMDETFDVILDKGGLDALMEPELG----HKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (771)
Q Consensus 130 -----------~~~~sFDlVi~~~~l~~l~~~~~~----~~~~~~~l~~i~rvLkpGG~~ii~~~~~~ 182 (771)
+++++||+|++.+++++....... ......++.++.++|+|||.|++..+..+
T Consensus 91 ~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 158 (201)
T 2plw_A 91 NNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGS 158 (201)
T ss_dssp -CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred chhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCC
Confidence 567899999998877764211100 01134589999999999999999776543
No 145
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.23 E-value=4.4e-11 Score=129.15 Aligned_cols=107 Identities=15% Similarity=0.159 Sum_probs=90.6
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEecccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~l 144 (771)
+..+|||+|||+|.++..+++. +..+++++|++ .+++.++++....+ .++++..+|+.+.+++++ ||+|++..++
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~l 242 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNFL 242 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESCG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcchh
Confidence 5789999999999999999887 23499999999 99998887764433 369999999998777654 9999999999
Q ss_pred ccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
+++.+++ ...++++++++|+|||++++.+...
T Consensus 243 ~~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 243 HHFDVAT-----CEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp GGSCHHH-----HHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred ccCCHHH-----HHHHHHHHHHhCCCCcEEEEEeecC
Confidence 9985443 6799999999999999999998653
No 146
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.23 E-value=3.9e-11 Score=115.87 Aligned_cols=107 Identities=16% Similarity=0.161 Sum_probs=85.7
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-CC-CeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC--------CCCCCcc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDA-GF-HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ--------FMDETFD 136 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~-g~-~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~--------~~~~sFD 136 (771)
.++.+|||+|||+|.++..+++. |. .+++++|+++ +++ .+++.+.++|+.+.+ +++++||
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~---------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D 90 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP---------IVGVDFLQGDFRDELVMKALLERVGDSKVQ 90 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC---------CTTEEEEESCTTSHHHHHHHHHHHTTCCEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc---------cCcEEEEEcccccchhhhhhhccCCCCcee
Confidence 46789999999999999999887 43 6999999999 653 157899999999876 7778999
Q ss_pred EEEeccccccccCcccch----HHHHHHHHHHHHccccCeEEEEEEcCcch
Q 004164 137 VILDKGGLDALMEPELGH----KLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (771)
Q Consensus 137 lVi~~~~l~~l~~~~~~~----~~~~~~l~~i~rvLkpGG~~ii~~~~~~~ 183 (771)
+|++..++++........ .....++.++.++|+|||.+++..+..+.
T Consensus 91 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 91 VVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEG 141 (180)
T ss_dssp EEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTT
T ss_pred EEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCc
Confidence 999998888765432100 01268999999999999999998876443
No 147
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.23 E-value=1.9e-11 Score=122.92 Aligned_cols=120 Identities=10% Similarity=0.076 Sum_probs=91.0
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCC-C
Q 004164 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTS-M 128 (771)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~-l 128 (771)
..+...+..++... .++.+|||+|||+|.++..++..+..+|+++|+|+.+++.++++....+ .+++++++|+.+ +
T Consensus 39 ~~~~~~l~~~l~~~--~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~ 116 (202)
T 2fpo_A 39 DRVRETLFNWLAPV--IVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFL 116 (202)
T ss_dssp HHHHHHHHHHHHHH--HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHhh--cCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHH
Confidence 34444455554320 1568999999999999999888877799999999999998887765544 589999999987 4
Q ss_pred CCCCCCccEEEeccccccccCcccchHHHHHHHHHHHH--ccccCeEEEEEEcC
Q 004164 129 QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKR--LLKSGGKFVCLTLA 180 (771)
Q Consensus 129 ~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~r--vLkpGG~~ii~~~~ 180 (771)
+..+++||+|++...++ ... ...+++.+.+ +|+|||++++....
T Consensus 117 ~~~~~~fD~V~~~~p~~-~~~-------~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 117 AQKGTPHNIVFVDPPFR-RGL-------LEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp SSCCCCEEEEEECCSSS-TTT-------HHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred hhcCCCCCEEEECCCCC-CCc-------HHHHHHHHHhcCccCCCcEEEEEECC
Confidence 55667999999876643 211 4467777765 59999999988755
No 148
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.22 E-value=2.3e-11 Score=124.93 Aligned_cols=139 Identities=14% Similarity=0.093 Sum_probs=101.5
Q ss_pred cCCCCHhhHHHHHhhcCCCCcccc--ccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCC
Q 004164 23 GDFTSKENWDKFFTIRGIGDSFEW--YAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFS 100 (771)
Q Consensus 23 ~~f~~~~yWd~~y~~~~~~~~~ew--~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS 100 (771)
..|....+|+..|... ...+.. ....+.+...+.+.+.. .++.+|||+|||+|.++..+++.+..+|+++|++
T Consensus 49 ~~f~~~~~~~~~y~~~--~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~ 123 (235)
T 1jg1_A 49 YLSVEDKYKKYAHIDE--PLPIPAGQTVSAPHMVAIMLEIANL---KPGMNILEVGTGSGWNAALISEIVKTDVYTIERI 123 (235)
T ss_dssp GGGSCGGGGGGTTSSS--CEECSTTCEECCHHHHHHHHHHHTC---CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESC
T ss_pred hhhCCchhhhcCccCC--CcccCCCceeccHHHHHHHHHhcCC---CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCC
Confidence 3455666777766543 122211 12234555666666654 5788999999999999999998742599999999
Q ss_pred HHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCCC-CccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 101 KVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMDE-TFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 101 ~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~-sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
+.+++.++++....+ .++.+..+|+ ..++++. .||+|++..+++++. .++.++|+|||++++..
T Consensus 124 ~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~~~~~~~~-------------~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 124 PELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIVTAGAPKIP-------------EPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEECSBBSSCC-------------HHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEECCcHHHHH-------------HHHHHhcCCCcEEEEEE
Confidence 999998887765443 4699999998 3344444 599999988887653 36889999999999987
Q ss_pred cC
Q 004164 179 LA 180 (771)
Q Consensus 179 ~~ 180 (771)
..
T Consensus 190 ~~ 191 (235)
T 1jg1_A 190 GS 191 (235)
T ss_dssp CS
T ss_pred ec
Confidence 54
No 149
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.22 E-value=7.6e-11 Score=121.11 Aligned_cols=124 Identities=19% Similarity=0.224 Sum_probs=91.1
Q ss_pred cccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEe
Q 004164 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVM 123 (771)
Q Consensus 46 w~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~ 123 (771)
|......+...+...+......++.+|||+|||+|.++..+++. + .++|+++|+|+.+++.+.+.+.. ..++.++++
T Consensus 54 w~~~~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-r~nv~~i~~ 132 (232)
T 3id6_C 54 WNAFRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-RPNIFPLLA 132 (232)
T ss_dssp CCTTTCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-CTTEEEEEC
T ss_pred hchHHHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-cCCeEEEEc
Confidence 44444455666766666445578999999999999999999886 3 46999999999998766555433 468999999
Q ss_pred ecCCCC---CCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 124 DMTSMQ---FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 124 D~~~l~---~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
|+.... ...++||+|++..+. ++ ....+...+.++|||||+|++...
T Consensus 133 Da~~~~~~~~~~~~~D~I~~d~a~-----~~----~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 133 DARFPQSYKSVVENVDVLYVDIAQ-----PD----QTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp CTTCGGGTTTTCCCEEEEEECCCC-----TT----HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccccchhhhccccceEEEEecCCC-----hh----HHHHHHHHHHHhCCCCeEEEEEEc
Confidence 998643 124689999987543 12 123445667779999999998743
No 150
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.22 E-value=4.2e-11 Score=124.57 Aligned_cols=147 Identities=16% Similarity=0.083 Sum_probs=101.5
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCC---CCCccEEEec
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFM---DETFDVILDK 141 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~---~~sFDlVi~~ 141 (771)
.++.+|||||||+|..+..|+.. +..+|+++|+|+.+++.+++.....+ .+++++++|+.+++.. +++||+|++.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 46789999999999999999886 44699999999999998877665444 4699999999887643 4799999986
Q ss_pred cccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcc-hhhcchhhhh-ccCcEEE-EeecCCCCCCCCCCccEEE
Q 004164 142 GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES-HVLGLLFPKF-RFGWKMS-VHAIPQKSSSEPSLQTFMV 218 (771)
Q Consensus 142 ~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~-~~~~~l~~~~-~~~w~~~-~~~i~~~~~~~~~l~~f~~ 218 (771)
.+ .+ ...+++.+.++|||||+|++..-... .-...+.... ..+|... +..+... ...-..+.+
T Consensus 159 a~----~~-------~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p---~~~~~R~l~ 224 (249)
T 3g89_A 159 AV----AP-------LCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLP---LSGEARHLV 224 (249)
T ss_dssp SS----CC-------HHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECT---TTCCEEEEE
T ss_pred Cc----CC-------HHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCC---CCCCcEEEE
Confidence 43 22 45899999999999999998774311 1111122221 2255443 3333211 112345777
Q ss_pred EEEEcCCcc
Q 004164 219 VADKENSSV 227 (771)
Q Consensus 219 v~~k~~~~~ 227 (771)
+++|.+.++
T Consensus 225 ~~~k~~~t~ 233 (249)
T 3g89_A 225 VLEKTAPTP 233 (249)
T ss_dssp EEEECSCCC
T ss_pred EEEeCCCCC
Confidence 777765544
No 151
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.21 E-value=1.6e-10 Score=126.32 Aligned_cols=160 Identities=18% Similarity=0.164 Sum_probs=112.8
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcC--CCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCC
Q 004164 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG--FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSM 128 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g--~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l 128 (771)
.+...+..+... .++.+|||+|||+|.++..++..+ ..+|+|+|+++.+++.+++.+...+ .++++.++|+.++
T Consensus 190 ~la~~l~~~~~~---~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~ 266 (354)
T 3tma_A 190 VLAQALLRLADA---RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHL 266 (354)
T ss_dssp HHHHHHHHHTTC---CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGG
T ss_pred HHHHHHHHHhCC---CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhC
Confidence 344555555554 577899999999999999999864 3589999999999998877765544 3799999999999
Q ss_pred CCCCCCccEEEeccccccccCcc-cchHHHHHHHHHHHHccccCeEEEEEEcCcchhhcchhhhhccCcEEEEeecCCCC
Q 004164 129 QFMDETFDVILDKGGLDALMEPE-LGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIPQKS 207 (771)
Q Consensus 129 ~~~~~sFDlVi~~~~l~~l~~~~-~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~~~~~l~~~~~~~w~~~~~~i~~~~ 207 (771)
+.+.+.||+|+++.......... ........+++++.++|+|||++++++.....+ +.+.. .+|........ .
T Consensus 267 ~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~~~-~~~~~---~g~~~~~~~~l--~ 340 (354)
T 3tma_A 267 PRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPALL-KRALP---PGFALRHARVV--E 340 (354)
T ss_dssp GGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHHHH-HHHCC---TTEEEEEEEEC--C
T ss_pred ccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHHHH-HHHhh---cCcEEEEEEEE--E
Confidence 87778899999976655433211 112235789999999999999999998764332 22222 45555432221 1
Q ss_pred CCCCCCccEEEEEEE
Q 004164 208 SSEPSLQTFMVVADK 222 (771)
Q Consensus 208 ~~~~~l~~f~~v~~k 222 (771)
...+..++++++|
T Consensus 341 --~g~l~~~i~vl~r 353 (354)
T 3tma_A 341 --QGGVYPRVFVLEK 353 (354)
T ss_dssp --BTTBCCEEEEEEE
T ss_pred --eCCEEEEEEEEEc
Confidence 2246677888766
No 152
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.21 E-value=4.5e-11 Score=131.17 Aligned_cols=106 Identities=16% Similarity=0.148 Sum_probs=90.9
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC--CCCCCCccEEEecc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM--QFMDETFDVILDKG 142 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l--~~~~~sFDlVi~~~ 142 (771)
...+|||||||+|.++..+++. +..+++++|+ +.+++.++++....+ ++++++.+|+.+. |++ ++||+|++..
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~ 256 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQ 256 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEES
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEec
Confidence 5689999999999999999886 2348999999 999998887765444 4799999999986 466 7899999999
Q ss_pred ccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
++|++.+++ ..+++++++++|+|||++++.+..
T Consensus 257 vlh~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~ 289 (363)
T 3dp7_A 257 FLDCFSEEE-----VISILTRVAQSIGKDSKVYIMETL 289 (363)
T ss_dssp CSTTSCHHH-----HHHHHHHHHHHCCTTCEEEEEECC
T ss_pred hhhhCCHHH-----HHHHHHHHHHhcCCCcEEEEEeec
Confidence 999887554 678999999999999999998864
No 153
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.21 E-value=1.4e-11 Score=119.11 Aligned_cols=122 Identities=16% Similarity=0.171 Sum_probs=89.9
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCC-C
Q 004164 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM-Q 129 (771)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l-~ 129 (771)
..+...+..++... ..++.+|||+|||+|.++..++..+. +|+++|+|+.+++.++++....+.+++++++|+.+. +
T Consensus 25 ~~~~~~~~~~~~~~-~~~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~ 102 (171)
T 1ws6_A 25 VRLRKALFDYLRLR-YPRRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLP 102 (171)
T ss_dssp HHHHHHHHHHHHHH-CTTCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHH
T ss_pred HHHHHHHHHHHHhh-ccCCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHH
Confidence 34444455555310 01578999999999999999999887 599999999999988776654434899999998873 2
Q ss_pred -CC--CCCccEEEeccccccccCcccchHHHHHHHHHHH--HccccCeEEEEEEcCcch
Q 004164 130 -FM--DETFDVILDKGGLDALMEPELGHKLGNQYLSEVK--RLLKSGGKFVCLTLAESH 183 (771)
Q Consensus 130 -~~--~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~--rvLkpGG~~ii~~~~~~~ 183 (771)
++ .++||+|++...++ .... .+++.+. ++|+|||++++.......
T Consensus 103 ~~~~~~~~~D~i~~~~~~~--~~~~-------~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 103 EAKAQGERFTVAFMAPPYA--MDLA-------ALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp HHHHTTCCEEEEEECCCTT--SCTT-------HHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred hhhccCCceEEEEECCCCc--hhHH-------HHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 21 24899999987765 2222 5566666 999999999998866443
No 154
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.21 E-value=9.9e-11 Score=119.25 Aligned_cols=123 Identities=18% Similarity=0.262 Sum_probs=91.9
Q ss_pred cccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEe
Q 004164 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVM 123 (771)
Q Consensus 46 w~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~ 123 (771)
|......+...+...+......++.+|||+|||+|.++..+++. | .++|+++|+|+.+++.+.+.+... ++++++++
T Consensus 51 ~~p~~~~~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~ 129 (227)
T 1g8a_A 51 WNPNRSKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILG 129 (227)
T ss_dssp CCTTTCHHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEEC
T ss_pred eCCCchhHHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEc
Confidence 55555555555544454333467889999999999999999987 4 369999999999999887766443 78999999
Q ss_pred ecCCCC---CCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 124 DMTSMQ---FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 124 D~~~l~---~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
|+.+.. ...++||+|++... .+. ....++.++.++|||||++++..
T Consensus 130 d~~~~~~~~~~~~~~D~v~~~~~-----~~~----~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 130 DATKPEEYRALVPKVDVIFEDVA-----QPT----QAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp CTTCGGGGTTTCCCEEEEEECCC-----STT----HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCcchhhcccCCceEEEECCC-----CHh----HHHHHHHHHHHhcCCCCEEEEEE
Confidence 998742 12368999996543 111 13455999999999999999873
No 155
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.20 E-value=7.5e-11 Score=129.97 Aligned_cols=123 Identities=14% Similarity=0.157 Sum_probs=94.0
Q ss_pred HHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcC-CCeEEEEcCCHHHHHHHHHHhhcCC----CCcEEEEeecCCC
Q 004164 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR----SDMRWRVMDMTSM 128 (771)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g-~~~V~~vDiS~~~i~~~~~~~~~~~----~~i~~~~~D~~~l 128 (771)
...+.+.+.. .++.+|||+|||+|.++..+++.+ ..+|+++|+|+.+++.+++.....+ .+++|...|+.+
T Consensus 211 ~~~ll~~l~~---~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~- 286 (375)
T 4dcm_A 211 ARFFMQHLPE---NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS- 286 (375)
T ss_dssp HHHHHHTCCC---SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-
T ss_pred HHHHHHhCcc---cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-
Confidence 4456666654 456899999999999999999984 4599999999999998877665433 258889999988
Q ss_pred CCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcc
Q 004164 129 QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (771)
Q Consensus 129 ~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~ 182 (771)
++++++||+|+++..+++..... ......+++++.++|+|||+++++.....
T Consensus 287 ~~~~~~fD~Ii~nppfh~~~~~~--~~~~~~~l~~~~~~LkpgG~l~iv~n~~~ 338 (375)
T 4dcm_A 287 GVEPFRFNAVLCNPPFHQQHALT--DNVAWEMFHHARRCLKINGELYIVANRHL 338 (375)
T ss_dssp TCCTTCEEEEEECCCC---------CCHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred cCCCCCeeEEEECCCcccCcccC--HHHHHHHHHHHHHhCCCCcEEEEEEECCc
Confidence 56778999999998887532211 11255889999999999999999876533
No 156
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.19 E-value=3.5e-11 Score=121.71 Aligned_cols=104 Identities=10% Similarity=0.111 Sum_probs=80.4
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC-CCeEEEEcCCHHHHHHHHHHhh-----cCCCCcEEEEeecCCCCCCCCCccEEEe
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNV-----RDRSDMRWRVMDMTSMQFMDETFDVILD 140 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g-~~~V~~vDiS~~~i~~~~~~~~-----~~~~~i~~~~~D~~~l~~~~~sFDlVi~ 140 (771)
.++.+|||+|||+|.++..|++.. ..+|+|+|+|+.|++.+.+.+. ...++++++++|+.++++++++ |.|+.
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHV 104 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEE
Confidence 478899999999999999999983 3599999999998886543332 1225899999999999987776 77763
Q ss_pred cc---cc--ccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 141 KG---GL--DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 141 ~~---~l--~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
.. .+ +++.++. .++++++++|||||++++..
T Consensus 105 ~~~~~~~~~~~~~~~~-------~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSSP-------EMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp ESCCHHHHHHHHTSSS-------HHHHHHHHTEEEEEEEEEEE
T ss_pred EccchhhhhhhhccHH-------HHHHHHHHHcCCCcEEEEEe
Confidence 22 12 1444433 89999999999999999854
No 157
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.19 E-value=7.3e-11 Score=127.66 Aligned_cols=107 Identities=15% Similarity=0.045 Sum_probs=90.8
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEeccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGG 143 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~ 143 (771)
.+..+|||+|||+|.++..+++. +..+++++|+ +.+++.++++....+ ++++|..+|+. .+++. +||+|++..+
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 244 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAV 244 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESC
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehh
Confidence 45689999999999999999886 3358999999 999998887765543 67999999997 45554 8999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
+|++.+++ ..+++++++++|+|||++++.+...
T Consensus 245 lh~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 245 LHDWDDLS-----AVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp GGGSCHHH-----HHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred hccCCHHH-----HHHHHHHHHHhcCCCCEEEEEeecC
Confidence 99987654 6799999999999999999998653
No 158
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.17 E-value=9.4e-11 Score=123.47 Aligned_cols=102 Identities=17% Similarity=0.236 Sum_probs=85.7
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc--CCCeEEEEcCCHHHHHHHHHHhhcC-C-CCcEEEEeecCCCCCCCCCccEEEecc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRD-R-SDMRWRVMDMTSMQFMDETFDVILDKG 142 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~--g~~~V~~vDiS~~~i~~~~~~~~~~-~-~~i~~~~~D~~~l~~~~~sFDlVi~~~ 142 (771)
.++.+|||+|||+|.++..+++. +..+|+++|+++.+++.+++..... + +++++.++|+.+ ++++++||+|++
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~-- 185 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIA-- 185 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEE--
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEE--
Confidence 67889999999999999999987 2359999999999999888776554 3 579999999988 667789999997
Q ss_pred ccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
+++++. .+++++.++|+|||++++.+...
T Consensus 186 ---~~~~~~-------~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 186 ---DIPDPW-------NHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp ---CCSCGG-------GSHHHHHHTEEEEEEEEEEESSH
T ss_pred ---cCcCHH-------HHHHHHHHHcCCCCEEEEEeCCH
Confidence 233333 78999999999999999998764
No 159
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.17 E-value=2.8e-10 Score=113.88 Aligned_cols=101 Identities=13% Similarity=0.050 Sum_probs=83.3
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCCCCccEEEeccccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~ 145 (771)
++.+|||+|||+|.++..++.. +..+++++|+|+.+++.+++.....+ .++++.++|+.+.+ +.++||+|++...
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~~-- 141 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRAF-- 141 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSCS--
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEecc--
Confidence 4689999999999999999986 34599999999999998877765444 45999999999876 4578999997542
Q ss_pred cccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 146 ~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
.+ ...++.++.++|+|||++++....
T Consensus 142 --~~-------~~~~l~~~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 142 --AS-------LNDMVSWCHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp --SS-------HHHHHHHHTTSEEEEEEEEEEESS
T ss_pred --CC-------HHHHHHHHHHhcCCCcEEEEEeCC
Confidence 11 458999999999999999988643
No 160
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.17 E-value=1.1e-10 Score=122.90 Aligned_cols=118 Identities=19% Similarity=0.263 Sum_probs=94.0
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcC----CCCcEEEEee
Q 004164 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRD----RSDMRWRVMD 124 (771)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~----~~~i~~~~~D 124 (771)
+.....+...+.. .++.+|||+|||+|.++..+++. + ..+|+++|+++.+++.+++..... ..++++.++|
T Consensus 85 ~~~~~~i~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d 161 (280)
T 1i9g_A 85 PKDAAQIVHEGDI---FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSD 161 (280)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSC
T ss_pred HHHHHHHHHHcCC---CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECc
Confidence 3334455555543 57889999999999999999985 3 459999999999999887776543 3689999999
Q ss_pred cCCCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcch
Q 004164 125 MTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (771)
Q Consensus 125 ~~~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~ 183 (771)
+.+.++++++||+|++. +.++. .++.++.++|+|||++++.+.....
T Consensus 162 ~~~~~~~~~~~D~v~~~-----~~~~~-------~~l~~~~~~L~pgG~l~~~~~~~~~ 208 (280)
T 1i9g_A 162 LADSELPDGSVDRAVLD-----MLAPW-------EVLDAVSRLLVAGGVLMVYVATVTQ 208 (280)
T ss_dssp GGGCCCCTTCEEEEEEE-----SSCGG-------GGHHHHHHHEEEEEEEEEEESSHHH
T ss_pred hHhcCCCCCceeEEEEC-----CcCHH-------HHHHHHHHhCCCCCEEEEEeCCHHH
Confidence 99988878899999972 23332 7799999999999999998876443
No 161
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.17 E-value=5.9e-11 Score=129.27 Aligned_cols=121 Identities=18% Similarity=0.180 Sum_probs=96.3
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCC-CeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCC
Q 004164 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFM 131 (771)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~-~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~ 131 (771)
....+.+.+.. .++.+|||+|||+|.++..+++.+. .+|+++|+|+.+++.++++....+....+..+|+.+..
T Consensus 184 ~~~~ll~~l~~---~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~-- 258 (343)
T 2pjd_A 184 GSQLLLSTLTP---HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV-- 258 (343)
T ss_dssp HHHHHHHHSCT---TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC--
T ss_pred HHHHHHHhcCc---CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc--
Confidence 45566677643 3567999999999999999998864 48999999999999998887666666788999987653
Q ss_pred CCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 132 DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 132 ~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+++||+|+++..+++.... .......+++++.++|+|||.++++...
T Consensus 259 ~~~fD~Iv~~~~~~~g~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 259 KGRFDMIISNPPFHDGMQT--SLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp CSCEEEEEECCCCCSSSHH--HHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred cCCeeEEEECCCcccCccC--CHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 6799999999888753210 1123679999999999999999998765
No 162
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.17 E-value=8e-11 Score=120.83 Aligned_cols=114 Identities=15% Similarity=0.126 Sum_probs=89.0
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcC-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC
Q 004164 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM 128 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g-~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l 128 (771)
.....+..++.. .++.+|||+|||+|..+..|+... ..+|+++|+++.+++.+++.....+ ++++++++|+.+.
T Consensus 58 ~~~~~l~~~~~~---~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 134 (232)
T 3ntv_A 58 LTLDLIKQLIRM---NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQ 134 (232)
T ss_dssp HHHHHHHHHHHH---HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC
T ss_pred HHHHHHHHHHhh---cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH
Confidence 444455555543 367899999999999999999853 4599999999999999988776554 4799999999875
Q ss_pred -C-CCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 129 -Q-FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 129 -~-~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
+ ..+++||+|++...... ...+++++.++|+|||++++..
T Consensus 135 ~~~~~~~~fD~V~~~~~~~~----------~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 135 FENVNDKVYDMIFIDAAKAQ----------SKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp HHHHTTSCEEEEEEETTSSS----------HHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHhhccCCccEEEEcCcHHH----------HHHHHHHHHHhcCCCeEEEEee
Confidence 3 33689999996543221 5689999999999999998844
No 163
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.16 E-value=7.3e-11 Score=123.03 Aligned_cols=103 Identities=16% Similarity=0.181 Sum_probs=86.0
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEecccccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~ 146 (771)
.++.+|||+|||+|.++..+++.|. +|+++|+++.+++.++++....+..+++.++|+.+. +++++||+|+++...+.
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~~~~~ 196 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANLYAEL 196 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEECCHHH
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEEEECCcHHH
Confidence 3678999999999999999999888 999999999999988877655443489999998763 45678999998755443
Q ss_pred ccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 147 l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
...++.++.++|+|||++++.....
T Consensus 197 ----------~~~~l~~~~~~LkpgG~lils~~~~ 221 (254)
T 2nxc_A 197 ----------HAALAPRYREALVPGGRALLTGILK 221 (254)
T ss_dssp ----------HHHHHHHHHHHEEEEEEEEEEEEEG
T ss_pred ----------HHHHHHHHHHHcCCCCEEEEEeecc
Confidence 4589999999999999999987653
No 164
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.16 E-value=1.7e-10 Score=126.14 Aligned_cols=107 Identities=15% Similarity=0.116 Sum_probs=90.6
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEeccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGG 143 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g-~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~ 143 (771)
.+..+|||||||+|.++..+++.. ..+++++|+ +.+++.++++....+ .+++++.+|+.+.++++ +|+|++..+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~--~D~v~~~~v 265 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPE--ADAVLFCRI 265 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCC--CSEEEEESC
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCC--CCEEEEech
Confidence 567899999999999999999873 348999999 999998887765443 35999999999887664 399999999
Q ss_pred cccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
++++.+.. ..+++++++++|+|||++++.+...
T Consensus 266 lh~~~d~~-----~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 266 LYSANEQL-----STIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp GGGSCHHH-----HHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred hccCCHHH-----HHHHHHHHHHhcCCCCEEEEEeccc
Confidence 99886533 6799999999999999999988653
No 165
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.15 E-value=4.4e-10 Score=112.55 Aligned_cols=121 Identities=11% Similarity=0.090 Sum_probs=90.3
Q ss_pred ccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecC
Q 004164 47 YAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMT 126 (771)
Q Consensus 47 ~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~ 126 (771)
|.....+...+...+......++.+|||+|||+|.++..++..|..+|+++|+|+.+++.++++....+.+++++++|+.
T Consensus 28 ~~~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~ 107 (207)
T 1wy7_A 28 YRTPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVS 107 (207)
T ss_dssp CCCCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGG
T ss_pred ecCchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchH
Confidence 44444555555544432122467899999999999999999987768999999999999887776544447999999999
Q ss_pred CCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEE
Q 004164 127 SMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 177 (771)
Q Consensus 127 ~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~ 177 (771)
+++ ++||+|+++..++...... ...+++++.++| ||.+++.
T Consensus 108 ~~~---~~~D~v~~~~p~~~~~~~~-----~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 108 EFN---SRVDIVIMNPPFGSQRKHA-----DRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp GCC---CCCSEEEECCCCSSSSTTT-----THHHHHHHHHHC--SEEEEEE
T ss_pred HcC---CCCCEEEEcCCCccccCCc-----hHHHHHHHHHhc--CcEEEEE
Confidence 864 4899999988877654322 347888999988 5555443
No 166
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.15 E-value=2.3e-10 Score=125.87 Aligned_cols=106 Identities=16% Similarity=0.039 Sum_probs=90.5
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEeccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGG 143 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g-~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~ 143 (771)
.+..+|||+|||+|.++..+++.. ..+++++|+ +.+++.++++....+ ++++|..+|+. .+++. .||+|++..+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 277 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKHV 277 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEESC
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhhh
Confidence 467899999999999999999873 348999999 999998887765443 57999999998 46665 8999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
++++.+++ ..+++++++++|+|||++++.+..
T Consensus 278 lh~~~d~~-----~~~~L~~~~~~L~pgG~l~i~e~~ 309 (369)
T 3gwz_A 278 LHDWDDDD-----VVRILRRIATAMKPDSRLLVIDNL 309 (369)
T ss_dssp GGGSCHHH-----HHHHHHHHHTTCCTTCEEEEEEEB
T ss_pred hccCCHHH-----HHHHHHHHHHHcCCCCEEEEEEec
Confidence 99986544 568999999999999999998865
No 167
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.15 E-value=4.1e-10 Score=117.73 Aligned_cols=121 Identities=16% Similarity=0.153 Sum_probs=88.8
Q ss_pred HHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcC-CCeEEEEcCCHHHHHHHHHHhhc---CC--CCcEEEEeecCCC--
Q 004164 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVR---DR--SDMRWRVMDMTSM-- 128 (771)
Q Consensus 57 l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g-~~~V~~vDiS~~~i~~~~~~~~~---~~--~~i~~~~~D~~~l-- 128 (771)
|..++.. .++.+|||+|||+|.++..++... ..+|+++|+++.+++.+++.... .+ .+++++++|+.+.
T Consensus 28 L~~~~~~---~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~ 104 (260)
T 2ozv_A 28 LASLVAD---DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAK 104 (260)
T ss_dssp HHHTCCC---CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHH
T ss_pred HHHHhcc---cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhh
Confidence 4455543 467899999999999999999884 35899999999999988776644 33 2589999999987
Q ss_pred -----CCCCCCccEEEeccccccccC---cc--------cchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 129 -----QFMDETFDVILDKGGLDALME---PE--------LGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 129 -----~~~~~sFDlVi~~~~l~~l~~---~~--------~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
.+++++||+|+++-.+..... ++ ........+++.+.++|+|||+|+++...
T Consensus 105 ~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 172 (260)
T 2ozv_A 105 ARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRP 172 (260)
T ss_dssp HHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred hhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcH
Confidence 256789999999844433210 00 00001568999999999999999987654
No 168
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.15 E-value=3.4e-11 Score=131.74 Aligned_cols=97 Identities=18% Similarity=0.221 Sum_probs=78.7
Q ss_pred CCCeEEEEcCC------cchhHHHHHhc--CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCC------CC
Q 004164 68 PPPQILVPGCG------NSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFM------DE 133 (771)
Q Consensus 68 ~~~~ILDiGCG------~G~ls~~La~~--g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~------~~ 133 (771)
+..+||||||| +|..+..+++. +..+|+++|+|+.|. ...++++|+++|+.++++. ++
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~~~~rI~fv~GDa~dlpf~~~l~~~d~ 287 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------VDELRIRTIQGDQNDAEFLDRIARRYG 287 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------GCBTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------hcCCCcEEEEecccccchhhhhhcccC
Confidence 56899999999 77777777664 346999999999762 1347899999999998877 78
Q ss_pred CccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 134 TFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 134 sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+||+|++.++ ++..+ ...+|++++++|||||+|++.++.
T Consensus 288 sFDlVisdgs-H~~~d-------~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 288 PFDIVIDDGS-HINAH-------VRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CEEEEEECSC-CCHHH-------HHHHHHHHGGGEEEEEEEEEECGG
T ss_pred CccEEEECCc-ccchh-------HHHHHHHHHHhcCCCeEEEEEecc
Confidence 9999999764 33321 568999999999999999998865
No 169
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.15 E-value=2.6e-10 Score=113.71 Aligned_cols=145 Identities=12% Similarity=0.192 Sum_probs=92.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCC-------C----CCc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFM-------D----ETF 135 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~-------~----~sF 135 (771)
.++.+|||+|||+|.++..+++.+ .+|+|+|+++. ...++++++++|+.+.+.. . ++|
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~~-~~V~gvD~~~~----------~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 92 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSLA-RKIISIDLQEM----------EEIAGVRFIRCDIFKETIFDDIDRALREEGIEKV 92 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTTC-SEEEEEESSCC----------CCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSE
T ss_pred CCCCEEEEEeecCCHHHHHHHHcC-CcEEEEecccc----------ccCCCeEEEEccccCHHHHHHHHHHhhcccCCcc
Confidence 478999999999999999999884 49999999983 1236899999999886421 1 489
Q ss_pred cEEEeccccccccCcc----cchHHHHHHHHHHHHccccCeEEEEEEcCcchhhcchhhhhccCcEEEEeecCCCCCCCC
Q 004164 136 DVILDKGGLDALMEPE----LGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIPQKSSSEP 211 (771)
Q Consensus 136 DlVi~~~~l~~l~~~~----~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~~~~~l~~~~~~~w~~~~~~i~~~~~~~~ 211 (771)
|+|++.+......... ......+.++..+.++|||||.|++..+..+.. ..+...+...|. .+...........
T Consensus 93 D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~-~~~~~~l~~~F~-~v~~~kP~asR~~ 170 (191)
T 3dou_A 93 DDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMT-NDFIAIWRKNFS-SYKISKPPASRGS 170 (191)
T ss_dssp EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHH-HHHHHHHGGGEE-EEEEECC------
T ss_pred eEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCH-HHHHHHHHHhcC-EEEEECCCCccCC
Confidence 9999976443221110 011235688999999999999999988765442 233333333332 2222222222233
Q ss_pred CCccEEEEEEEcCC
Q 004164 212 SLQTFMVVADKENS 225 (771)
Q Consensus 212 ~l~~f~~v~~k~~~ 225 (771)
.-+ +++||+.++.
T Consensus 171 s~E-~y~v~~~~~~ 183 (191)
T 3dou_A 171 SSE-IYIMFFGFKA 183 (191)
T ss_dssp CCE-EEEEEEEECC
T ss_pred Cce-EEEEEeeecc
Confidence 334 4455665543
No 170
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.15 E-value=6.4e-11 Score=122.03 Aligned_cols=109 Identities=10% Similarity=0.001 Sum_probs=87.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
....+||+||+|+|.++.++....|. ++++||++|.|++.|++++.- ...+++++.+|+.+.+....
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~~~----------- 125 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPR-QTHKVIPLKGLWEDVAPTLP----------- 125 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGG-CSSEEEEEESCHHHHGGGSC-----------
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhh-CCCceEEEeehHHhhccccc-----------
Confidence 45679999999999999999888764 899999999999999999843 34678999999998866544
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcc-cHHHHHHHHHccCCCcEEEE
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV-EGSFLLTVKDALSEQGLFIV 687 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~-~~~fl~~~~~~L~~~Gilv~ 687 (771)
...||.|+.|....... ..++. -..+++.++++|+|||+|++
T Consensus 126 --------------------~~~FD~i~~D~~~~~~~------~~~~~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 126 --------------------DGHFDGILYDTYPLSEE------TWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp --------------------TTCEEEEEECCCCCBGG------GTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred --------------------ccCCceEEEeeeecccc------hhhhcchhhhhhhhhheeCCCCEEEE
Confidence 36799999987554211 22222 36788999999999999986
No 171
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.14 E-value=7.8e-11 Score=120.28 Aligned_cols=101 Identities=13% Similarity=0.271 Sum_probs=85.2
Q ss_pred CcEEEEeccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 543 VKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 543 ~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
.+||+||+|+|..+.+|...+| ..+|++||+|+.+++.|++++ |+ .+++++++++|+.+++....
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-~~~~i~~~~gda~~~l~~~~---------- 126 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGY-SPSRVRFLLSRPLDVMSRLA---------- 126 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTC-CGGGEEEECSCHHHHGGGSC----------
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-CcCcEEEEEcCHHHHHHHhc----------
Confidence 4899999999999999998875 679999999999999999998 44 12689999999999977652
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEE
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 688 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~N 688 (771)
..+||+|++|....+ -..+++.+.+.|+|||+++++
T Consensus 127 ---------------------~~~fD~V~~d~~~~~-------------~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 127 ---------------------NDSYQLVFGQVSPMD-------------LKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp ---------------------TTCEEEEEECCCTTT-------------HHHHHHHHHHHEEEEEEEEET
T ss_pred ---------------------CCCcCeEEEcCcHHH-------------HHHHHHHHHHHcCCCcEEEEe
Confidence 257999999864331 267999999999999999985
No 172
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.14 E-value=7.2e-11 Score=124.36 Aligned_cols=121 Identities=17% Similarity=0.121 Sum_probs=89.2
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCC
Q 004164 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQF 130 (771)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~ 130 (771)
+...+.+.+. .++.+|||+|||+|.++..++.. +..+|+++|+|+.+++.+++.....+ ++++++++|+.+. +
T Consensus 98 l~~~~l~~~~----~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~-~ 172 (276)
T 2b3t_A 98 LVEQALARLP----EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA-L 172 (276)
T ss_dssp HHHHHHHHSC----SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG-G
T ss_pred HHHHHHHhcc----cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh-c
Confidence 3344444443 35679999999999999999865 44599999999999998877665433 4799999999874 4
Q ss_pred CCCCccEEEeccccccc-------------cC-----cccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 131 MDETFDVILDKGGLDAL-------------ME-----PELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 131 ~~~sFDlVi~~~~l~~l-------------~~-----~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
++++||+|+++...... +. ..++......++.++.++|+|||++++..
T Consensus 173 ~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 173 AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 46789999997433221 10 01111346789999999999999998864
No 173
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.14 E-value=1.6e-10 Score=115.38 Aligned_cols=118 Identities=13% Similarity=0.135 Sum_probs=83.9
Q ss_pred ccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecC
Q 004164 47 YAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMT 126 (771)
Q Consensus 47 ~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~ 126 (771)
|.....+...+...+......++.+|||+|||+|.++..++..|..+|+++|+|+.+++.++++.. +++++++|+.
T Consensus 30 ~~~~~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~d~~ 105 (200)
T 1ne2_A 30 YPTDASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG----GVNFMVADVS 105 (200)
T ss_dssp CCCCHHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT----TSEEEECCGG
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC----CCEEEECcHH
Confidence 334344444444444211124678999999999999999998877689999999999998876653 7999999999
Q ss_pred CCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 127 SMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 127 ~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
+++ ++||+|++...+++..... ...+++++.++| |+.+++..
T Consensus 106 ~~~---~~~D~v~~~~p~~~~~~~~-----~~~~l~~~~~~~--g~~~~~~~ 147 (200)
T 1ne2_A 106 EIS---GKYDTWIMNPPFGSVVKHS-----DRAFIDKAFETS--MWIYSIGN 147 (200)
T ss_dssp GCC---CCEEEEEECCCC------------CHHHHHHHHHHE--EEEEEEEE
T ss_pred HCC---CCeeEEEECCCchhccCch-----hHHHHHHHHHhc--CcEEEEEc
Confidence 865 6899999999998876432 247889999988 55555443
No 174
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.14 E-value=7.5e-10 Score=114.84 Aligned_cols=105 Identities=17% Similarity=0.263 Sum_probs=88.2
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
.+.+||+||+|+|..+..+...+| ..+|++||+++.+++.|++++ |+ .++++++++|+.+++....
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~~l~~~~-------- 132 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV--DQRVTLREGPALQSLESLG-------- 132 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC--TTTEEEEESCHHHHHHTCC--------
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHhcC--------
Confidence 457999999999999999999988 789999999999999999998 54 4689999999999887643
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEec
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 690 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 690 (771)
....||+|++|.... ....+|+.+.+.|+|||+|++.-+
T Consensus 133 ----------------------~~~~fD~V~~d~~~~-------------~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 133 ----------------------ECPAFDLIFIDADKP-------------NNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp ----------------------SCCCCSEEEECSCGG-------------GHHHHHHHHHHTCCTTCEEEEECC
T ss_pred ----------------------CCCCeEEEEECCchH-------------HHHHHHHHHHHhcCCCeEEEEeCC
Confidence 124799999976322 126799999999999999998644
No 175
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.14 E-value=1.4e-10 Score=124.73 Aligned_cols=112 Identities=17% Similarity=0.123 Sum_probs=91.5
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCC--CeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCC
Q 004164 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF--HGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSM 128 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~--~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l 128 (771)
.....+...+.. .++.+|||+|||+|.++..+++.+. .+|+++|+|+.+++.++++....+ .++++.++|+.+.
T Consensus 62 ~~~~~l~~~l~~---~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~ 138 (317)
T 1dl5_A 62 SLMALFMEWVGL---DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG 138 (317)
T ss_dssp HHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred HHHHHHHHhcCC---CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhc
Confidence 455556666654 6789999999999999999998743 469999999999999887765544 5699999999886
Q ss_pred CCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 129 QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 129 ~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
...+++||+|++..+++++. +++.++|||||++++...
T Consensus 139 ~~~~~~fD~Iv~~~~~~~~~-------------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 139 VPEFSPYDVIFVTVGVDEVP-------------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp CGGGCCEEEEEECSBBSCCC-------------HHHHHHEEEEEEEEEEBC
T ss_pred cccCCCeEEEEEcCCHHHHH-------------HHHHHhcCCCcEEEEEEC
Confidence 55568999999999998763 467889999999998753
No 176
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.14 E-value=2.7e-11 Score=140.83 Aligned_cols=107 Identities=19% Similarity=0.219 Sum_probs=88.5
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCC--CCCCCCccEEEecccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSM--QFMDETFDVILDKGGL 144 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l--~~~~~sFDlVi~~~~l 144 (771)
.+.+|||||||.|.++..|++.|. +|||||+|+.+|+.|+..+.+.+ .+++|.+++++++ .+++++||+|++.+++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 457999999999999999999998 99999999999999988776654 5799999999987 4667899999999999
Q ss_pred ccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+|+.++.. -..+..+.+.|+++|..++....
T Consensus 145 ehv~~~~~-----~~~~~~~~~tl~~~~~~~~~~~~ 175 (569)
T 4azs_A 145 HHIVHLHG-----IDEVKRLLSRLADVTQAVILELA 175 (569)
T ss_dssp HHHHHHHC-----HHHHHHHHHHHHHHSSEEEEECC
T ss_pred hcCCCHHH-----HHHHHHHHHHhccccceeeEEec
Confidence 99976542 12344577778888777666654
No 177
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.14 E-value=1.9e-10 Score=126.25 Aligned_cols=105 Identities=20% Similarity=0.122 Sum_probs=88.7
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEeccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGG 143 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g-~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~ 143 (771)
.++.+|||||||+|.++..+++.. ..+++++|+ +.+++.++++....+ .+++++.+|+.+ +++. .||+|++..+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~v 257 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TADVVLLSFV 257 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEESC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEecc
Confidence 467899999999999999999874 348999999 999998887765443 479999999976 4443 4999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
++++.+.. ...++++++++|+|||++++.+.
T Consensus 258 l~~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 258 LLNWSDED-----ALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp GGGSCHHH-----HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCCHHH-----HHHHHHHHHHhcCCCcEEEEEec
Confidence 99876543 56899999999999999999887
No 178
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.13 E-value=1.4e-10 Score=118.00 Aligned_cols=115 Identities=14% Similarity=0.094 Sum_probs=90.3
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCC------CeEEEEcCCHHHHHHHHHHhhcC------CCCcE
Q 004164 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF------HGITNVDFSKVVISDMLRRNVRD------RSDMR 119 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~------~~V~~vDiS~~~i~~~~~~~~~~------~~~i~ 119 (771)
.....+.+.+.. ...++.+|||+|||+|.++..+++... .+|+++|+++.+++.++++.... ..+++
T Consensus 65 ~~~~~~~~~l~~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~ 143 (227)
T 2pbf_A 65 HMHALSLKRLIN-VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFK 143 (227)
T ss_dssp HHHHHHHHHHTT-TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEE
T ss_pred HHHHHHHHHHHh-hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEE
Confidence 344455555531 125778999999999999999988732 58999999999999888776543 35799
Q ss_pred EEEeecCCCC----CCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 120 WRVMDMTSMQ----FMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 120 ~~~~D~~~l~----~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+.++|+.+.. ...++||+|++...++++ +.++.++|+|||++++....
T Consensus 144 ~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~-------------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 144 IIHKNIYQVNEEEKKELGLFDAIHVGASASEL-------------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp EEECCGGGCCHHHHHHHCCEEEEEECSBBSSC-------------CHHHHHHEEEEEEEEEEEEE
T ss_pred EEECChHhcccccCccCCCcCEEEECCchHHH-------------HHHHHHhcCCCcEEEEEEcc
Confidence 9999998865 556889999998887754 46789999999999987653
No 179
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.13 E-value=1.7e-10 Score=117.27 Aligned_cols=114 Identities=16% Similarity=0.179 Sum_probs=89.5
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-CC-CeEEEEcCCHHHHHHHHHHhhcC------CCCcEEEEee
Q 004164 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GF-HGITNVDFSKVVISDMLRRNVRD------RSDMRWRVMD 124 (771)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g~-~~V~~vDiS~~~i~~~~~~~~~~------~~~i~~~~~D 124 (771)
....+...+.. ...++.+|||+|||+|..+..+++. +. .+|+++|+|+.+++.++++.... ..++.+.++|
T Consensus 63 ~~~~~l~~l~~-~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 141 (226)
T 1i1n_A 63 MHAYALELLFD-QLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD 141 (226)
T ss_dssp HHHHHHHHTTT-TSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC
T ss_pred HHHHHHHHHHh-hCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECC
Confidence 34445555541 1257889999999999999999887 43 49999999999999887766442 3479999999
Q ss_pred cCCCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 125 MTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 125 ~~~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+......+++||+|++...++++ +.++.++|||||++++....
T Consensus 142 ~~~~~~~~~~fD~i~~~~~~~~~-------------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 142 GRMGYAEEAPYDAIHVGAAAPVV-------------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp GGGCCGGGCCEEEEEECSBBSSC-------------CHHHHHTEEEEEEEEEEESC
T ss_pred cccCcccCCCcCEEEECCchHHH-------------HHHHHHhcCCCcEEEEEEec
Confidence 98766567889999988777654 46789999999999998754
No 180
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.13 E-value=2.1e-11 Score=122.04 Aligned_cols=125 Identities=16% Similarity=0.161 Sum_probs=75.4
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCC-CeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCC
Q 004164 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFM 131 (771)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~-~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~ 131 (771)
+...+.+.+.. ..++.+|||+|||+|.++..+++.+. .+++++|+|+.+++.++++....+.+++++++|+.+ +++
T Consensus 17 ~~~~~~~~l~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~ 93 (215)
T 4dzr_A 17 LVEEAIRFLKR--MPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLI 93 (215)
T ss_dssp HHHHHHHHHTT--CCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH-HHH
T ss_pred HHHHHHHHhhh--cCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhh
Confidence 34445555532 13678999999999999999999842 489999999999998877664444478899999987 555
Q ss_pred C-----CCccEEEeccccccccCcc-------------------cchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 132 D-----ETFDVILDKGGLDALMEPE-------------------LGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 132 ~-----~sFDlVi~~~~l~~l~~~~-------------------~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+ ++||+|+++..++...... .+......+++++.++|+|||++++++..
T Consensus 94 ~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 94 ERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred hhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 5 8999999975543322110 01111378999999999999996666544
No 181
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.13 E-value=1.9e-10 Score=119.27 Aligned_cols=114 Identities=19% Similarity=0.268 Sum_probs=91.0
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcCC-C-CcEEEEeecCC
Q 004164 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR-S-DMRWRVMDMTS 127 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~~-~-~i~~~~~D~~~ 127 (771)
.....+...+.. .++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.+++.....+ + ++++.++|+.+
T Consensus 80 ~~~~~i~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 156 (255)
T 3mb5_A 80 KDAALIVAYAGI---SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE 156 (255)
T ss_dssp HHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG
T ss_pred hHHHHHHHhhCC---CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh
Confidence 334456666654 67899999999999999999988 4 4699999999999998887765433 3 49999999986
Q ss_pred CCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 128 MQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 128 l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
. +++++||+|++. .+++. .++.++.++|+|||++++.....
T Consensus 157 ~-~~~~~~D~v~~~-----~~~~~-------~~l~~~~~~L~~gG~l~~~~~~~ 197 (255)
T 3mb5_A 157 G-IEEENVDHVILD-----LPQPE-------RVVEHAAKALKPGGFFVAYTPCS 197 (255)
T ss_dssp C-CCCCSEEEEEEC-----SSCGG-------GGHHHHHHHEEEEEEEEEEESSH
T ss_pred c-cCCCCcCEEEEC-----CCCHH-------HHHHHHHHHcCCCCEEEEEECCH
Confidence 4 677889999973 23322 68999999999999999988653
No 182
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.13 E-value=1.3e-10 Score=132.00 Aligned_cols=103 Identities=18% Similarity=0.145 Sum_probs=86.3
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEecccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~l 144 (771)
.++.+|||||||+|.++..+++.+..+|+++|+|+ +++.+++.....+ .+++++.+|+.+++++ ++||+|++...+
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMG 234 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCH
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCch
Confidence 46789999999999999999988777999999999 8888877665444 5799999999998765 689999998887
Q ss_pred ccccCcccchHHHHHHHHHHHHccccCeEEEE
Q 004164 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVC 176 (771)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii 176 (771)
+++.... ....+.+++++|+|||++++
T Consensus 235 ~~~~~e~-----~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 235 YMLFNER-----MLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHHTCHH-----HHHHHHHGGGGEEEEEEEES
T ss_pred HhcCcHH-----HHHHHHHHHHhcCCCCEEEE
Confidence 7765443 45677789999999999985
No 183
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.12 E-value=1.4e-10 Score=118.41 Aligned_cols=101 Identities=9% Similarity=0.084 Sum_probs=81.5
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcCC---CCcEEEEeecCCC--CCCCCCccEEEe
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR---SDMRWRVMDMTSM--QFMDETFDVILD 140 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~~---~~i~~~~~D~~~l--~~~~~sFDlVi~ 140 (771)
++.+|||+|||+|..+..|++. + .++|+++|+++.+++.+++.....+ .+++++++|+.+. .+++++||+|++
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 4459999999999999999985 2 3699999999999999988776544 3699999998765 244689999997
Q ss_pred ccccccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 141 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 141 ~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
...... ...+++++.++|||||++++.+
T Consensus 136 d~~~~~----------~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 136 QVSPMD----------LKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CCCTTT----------HHHHHHHHHHHEEEEEEEEETT
T ss_pred cCcHHH----------HHHHHHHHHHHcCCCcEEEEeC
Confidence 543221 4578999999999999999854
No 184
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.12 E-value=8.6e-10 Score=111.83 Aligned_cols=107 Identities=12% Similarity=0.169 Sum_probs=88.5
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
.+.+||+||+|+|..+.++...+| ..+|++||+++.+++.|++++ |+ .++++++.+|+.+++.....
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~------- 128 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL--NDRVEVRTGLALDSLQQIEN------- 128 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCHHHHHHHHHH-------
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHHHHh-------
Confidence 457999999999999999999988 689999999999999999987 44 56899999999998877541
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEec
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 690 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 690 (771)
.....||+|++|.... ....+|+.+.+.|+|||++++.-+
T Consensus 129 ---------------------~~~~~fD~v~~d~~~~-------------~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 129 ---------------------EKYEPFDFIFIDADKQ-------------NNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp ---------------------TTCCCCSEEEECSCGG-------------GHHHHHHHHHHTCCTTCEEEEESC
T ss_pred ---------------------cCCCCcCEEEEcCCcH-------------HHHHHHHHHHHhcCCCcEEEEeCC
Confidence 0114699999975421 226899999999999999998643
No 185
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.12 E-value=1.5e-10 Score=119.31 Aligned_cols=108 Identities=14% Similarity=0.238 Sum_probs=88.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 615 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~ 615 (771)
..+.+||+||+|+|..+.++...+| ..+|++||+||.++++|++++ |+ +++++++++|+.+++......
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~gda~~~l~~l~~~----- 141 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV--EHKINFIESDAMLALDNLLQG----- 141 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHHHHHHHHHHS-----
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHHHHhc-----
Confidence 3567999999999999999999887 689999999999999999998 54 568999999999998765310
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEE
Q 004164 616 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 688 (771)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~N 688 (771)
......||+|++|.+.. ....+|+.+.++|+|||++++.
T Consensus 142 ---------------------~~~~~~fD~I~~d~~~~-------------~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 142 ---------------------QESEGSYDFGFVDADKP-------------NYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp ---------------------TTCTTCEEEEEECSCGG-------------GHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---------------------cCCCCCcCEEEECCchH-------------HHHHHHHHHHHhcCCCeEEEEe
Confidence 00125799999985322 1378999999999999999984
No 186
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.12 E-value=9.9e-11 Score=119.83 Aligned_cols=109 Identities=18% Similarity=0.114 Sum_probs=74.5
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCC-HHHHHHH---HHHhhcCC-CCcEEEEeecCCCCCC-CCCccEEEe
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFS-KVVISDM---LRRNVRDR-SDMRWRVMDMTSMQFM-DETFDVILD 140 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS-~~~i~~~---~~~~~~~~-~~i~~~~~D~~~l~~~-~~sFDlVi~ 140 (771)
++.+|||||||+|.++..|++. ...+|+|+|+| +.|++.+ +++....+ +++.|.++|+.+++.. .+.+|.|++
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 6789999999999999999865 33489999999 7776655 44443333 5799999999998531 144555554
Q ss_pred ccccccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 141 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 141 ~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
........ .........++.+++|+|||||++++..
T Consensus 104 ~~~~~~~~--~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 104 LFPWGTLL--EYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp ESCCHHHH--HHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred eCCCcHHh--hhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 33221110 0000001368999999999999999854
No 187
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.12 E-value=2.3e-10 Score=118.78 Aligned_cols=108 Identities=15% Similarity=0.190 Sum_probs=87.9
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 615 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~ 615 (771)
..+.+||+||+|+|..+.++...+| ..+|++||+++.+++.|++++ |+ +++++++++|+.+++......
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~--~~~i~~~~gda~~~l~~l~~~----- 150 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV--DHKIDFREGPALPVLDEMIKD----- 150 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC--GGGEEEEESCHHHHHHHHHHS-----
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCeEEEECCHHHHHHHHHhc-----
Confidence 3567999999999999999999887 679999999999999999997 44 568999999999998765310
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEE
Q 004164 616 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 688 (771)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~N 688 (771)
+.....||+|++|.+.. ....+|+.+.++|+|||++++.
T Consensus 151 ---------------------~~~~~~fD~V~~d~~~~-------------~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 151 ---------------------EKNHGSYDFIFVDADKD-------------NYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp ---------------------GGGTTCBSEEEECSCST-------------THHHHHHHHHHHBCTTCCEEEE
T ss_pred ---------------------cCCCCCEEEEEEcCchH-------------HHHHHHHHHHHhCCCCeEEEEe
Confidence 00025799999986422 1278999999999999999985
No 188
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.11 E-value=4.1e-10 Score=122.07 Aligned_cols=120 Identities=18% Similarity=0.249 Sum_probs=89.0
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-CC-CeEEEEcCCHHHHHHHHHHhhcC------------C
Q 004164 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GF-HGITNVDFSKVVISDMLRRNVRD------------R 115 (771)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g~-~~V~~vDiS~~~i~~~~~~~~~~------------~ 115 (771)
++.....+...+.. .++.+|||+|||+|.++..++.. |. .+|+++|+++.+++.+++..... .
T Consensus 90 ~~~~~~~~l~~l~~---~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~ 166 (336)
T 2b25_A 90 FPKDINMILSMMDI---NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWP 166 (336)
T ss_dssp CHHHHHHHHHHHTC---CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCC
T ss_pred CHHHHHHHHHhcCC---CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccC
Confidence 33434455556554 57899999999999999999987 54 69999999999999888766431 2
Q ss_pred CCcEEEEeecCCC--CCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcchh
Q 004164 116 SDMRWRVMDMTSM--QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHV 184 (771)
Q Consensus 116 ~~i~~~~~D~~~l--~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~~ 184 (771)
.++++.++|+.+. ++++++||+|++.. ..+. .++.++.++|+|||++++.......+
T Consensus 167 ~~v~~~~~d~~~~~~~~~~~~fD~V~~~~-----~~~~-------~~l~~~~~~LkpgG~lv~~~~~~~~~ 225 (336)
T 2b25_A 167 DNVDFIHKDISGATEDIKSLTFDAVALDM-----LNPH-------VTLPVFYPHLKHGGVCAVYVVNITQV 225 (336)
T ss_dssp CCEEEEESCTTCCC-------EEEEEECS-----SSTT-------TTHHHHGGGEEEEEEEEEEESSHHHH
T ss_pred CceEEEECChHHcccccCCCCeeEEEECC-----CCHH-------HHHHHHHHhcCCCcEEEEEeCCHHHH
Confidence 5799999999887 56677899999743 2222 46899999999999999888764443
No 189
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.11 E-value=2.1e-10 Score=118.96 Aligned_cols=104 Identities=11% Similarity=0.018 Sum_probs=83.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC-CCC--CCCccEEE
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM-QFM--DETFDVIL 139 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l-~~~--~~sFDlVi 139 (771)
.++.+|||||||+|..+..+++. + ..+|+++|+|+.+++.++++....+ .+++++++|+.+. +.. .++||+|+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 35789999999999999999987 2 4599999999999999988775544 4799999998763 322 34899999
Q ss_pred eccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 140 DKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 140 ~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+...... ...+++++.++|||||++++.+..
T Consensus 142 ~d~~~~~----------~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 142 IDADKPN----------NPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp ECSCGGG----------HHHHHHHHHHTCCTTCEEEEECCS
T ss_pred ECCchHH----------HHHHHHHHHHhcCCCeEEEEeCCC
Confidence 7543211 458999999999999999887654
No 190
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.11 E-value=1.1e-09 Score=122.02 Aligned_cols=116 Identities=12% Similarity=0.039 Sum_probs=87.6
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHH-------HHHhhcCC---CCcEE
Q 004164 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDM-------LRRNVRDR---SDMRW 120 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~-------~~~~~~~~---~~i~~ 120 (771)
.+...+.+.+.. .++.+|||||||+|.++..++.. |..+|+|+|+++.+++.+ ++++...+ .++++
T Consensus 229 ~~v~~ml~~l~l---~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~ 305 (433)
T 1u2z_A 229 NFLSDVYQQCQL---KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEF 305 (433)
T ss_dssp HHHHHHHHHTTC---CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEE
T ss_pred HHHHHHHHhcCC---CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEE
Confidence 344445555543 57899999999999999999986 666899999999998877 66554444 57999
Q ss_pred EEeecCCC--CC--CCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 121 RVMDMTSM--QF--MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 121 ~~~D~~~l--~~--~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
+++|.... ++ ..++||+|++..++.. ++ ...+|.++.++|||||++++.+
T Consensus 306 i~gD~~~~~~~~~~~~~~FDvIvvn~~l~~---~d-----~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 306 SLKKSFVDNNRVAELIPQCDVILVNNFLFD---ED-----LNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp EESSCSTTCHHHHHHGGGCSEEEECCTTCC---HH-----HHHHHHHHHTTCCTTCEEEESS
T ss_pred EEcCccccccccccccCCCCEEEEeCcccc---cc-----HHHHHHHHHHhCCCCeEEEEee
Confidence 98764432 22 2478999998765521 22 5688999999999999999875
No 191
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.11 E-value=2.5e-10 Score=118.14 Aligned_cols=108 Identities=19% Similarity=0.153 Sum_probs=83.4
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCC-CeEEEEcCCHHHHHHHHHHhhc---------CCCCcEEEEeecCC-CC--CCCCC
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVR---------DRSDMRWRVMDMTS-MQ--FMDET 134 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~-~~V~~vDiS~~~i~~~~~~~~~---------~~~~i~~~~~D~~~-l~--~~~~s 134 (771)
++.+|||+|||+|.++..++..+. .+|+|+|+|+.+++.++++... ...++.++++|+.+ ++ +++++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 568999999999999999998853 4899999999999988766543 23689999999987 55 77889
Q ss_pred ccEEEeccccccccCcccch------HHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 135 FDVILDKGGLDALMEPELGH------KLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 135 FDlVi~~~~l~~l~~~~~~~------~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+|.|+... +++.... .....++.++.++|+|||++++.+..
T Consensus 129 ~d~v~~~~-----p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 129 LSKMFFCF-----PDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp EEEEEEES-----CCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCEEEEEC-----CCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc
Confidence 99998432 2221000 00147999999999999999997754
No 192
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.10 E-value=1.7e-10 Score=125.77 Aligned_cols=106 Identities=12% Similarity=0.146 Sum_probs=89.3
Q ss_pred CCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCC-CCCCCccEEEecccc
Q 004164 69 PPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ-FMDETFDVILDKGGL 144 (771)
Q Consensus 69 ~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~-~~~~sFDlVi~~~~l 144 (771)
..+|||||||+|.++..+++. +..+++++|+ +.+++.++++....+ .+++++.+|+.+.+ +..+.||+|++..++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 789999999999999999987 3358999999 779988877665433 46999999999875 234679999999999
Q ss_pred ccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
|++.+.+ ...++++++++|+|||++++.+..
T Consensus 259 h~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 259 HYFDARE-----AREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp GGSCHHH-----HHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ccCCHHH-----HHHHHHHHHHHcCCCCEEEEEEec
Confidence 9986544 679999999999999999998865
No 193
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.10 E-value=9.8e-11 Score=119.03 Aligned_cols=117 Identities=9% Similarity=0.022 Sum_probs=87.1
Q ss_pred HHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC
Q 004164 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM 128 (771)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l 128 (771)
....+..++.. .++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.+++.....+ .+++++++|+.+.
T Consensus 46 ~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 122 (221)
T 3u81_A 46 KGQIMDAVIRE---YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDL 122 (221)
T ss_dssp HHHHHHHHHHH---HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred HHHHHHHHHHh---cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHH
Confidence 33444444432 35689999999999999999985 2 3599999999999998887765443 3699999998653
Q ss_pred -CC-C----CCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 129 -QF-M----DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 129 -~~-~----~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+. . .++||+|++.+..++... ...++..+ ++|+|||++++.+..
T Consensus 123 l~~~~~~~~~~~fD~V~~d~~~~~~~~-------~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 123 IPQLKKKYDVDTLDMVFLDHWKDRYLP-------DTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp GGGTTTTSCCCCCSEEEECSCGGGHHH-------HHHHHHHT-TCCCTTCEEEESCCC
T ss_pred HHHHHHhcCCCceEEEEEcCCcccchH-------HHHHHHhc-cccCCCeEEEEeCCC
Confidence 32 2 268999998776665432 23567777 999999999987655
No 194
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.10 E-value=2.4e-10 Score=125.43 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=84.2
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEeccccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~ 145 (771)
++.+|||||||+|.++...++.|..+|++||.|+ +++.|++.....+ .+++++.+|++++.++ ++||+|++...-+
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~ 160 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGY 160 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBT
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccc
Confidence 5789999999999999999999988999999997 7777766554444 5799999999999876 6899999876555
Q ss_pred cccCcccchHHHHHHHHHHHHccccCeEEEE
Q 004164 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVC 176 (771)
Q Consensus 146 ~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii 176 (771)
.+.... .+..++....++|+|||.++-
T Consensus 161 ~l~~e~----~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 161 GLLHES----MLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TBTTTC----SHHHHHHHHHHHEEEEEEEES
T ss_pred cccccc----hhhhHHHHHHhhCCCCceECC
Confidence 544332 267889999999999999763
No 195
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.09 E-value=3.7e-10 Score=123.42 Aligned_cols=106 Identities=11% Similarity=0.085 Sum_probs=88.6
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEeccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGG 143 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g-~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~ 143 (771)
.++.+|||+|||+|.++..+++.. ..+++++|+ +.+++.++++....+ .+++++.+|+.+ +++. .||+|++..+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~v 258 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSFV 258 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEESC
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEccc
Confidence 467899999999999999999874 348999999 999998887765443 379999999976 4443 4999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
++++.+.+ ...++++++++|+|||++++.+..
T Consensus 259 l~~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 259 LLNWPDHD-----AVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp GGGSCHHH-----HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ccCCCHHH-----HHHHHHHHHHhcCCCcEEEEEEEe
Confidence 99876543 568999999999999999999865
No 196
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.09 E-value=3.4e-10 Score=122.39 Aligned_cols=103 Identities=14% Similarity=0.082 Sum_probs=87.8
Q ss_pred CeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcC--CCCcEEEEeecCCCCCCCCCccEEEecccccc
Q 004164 70 PQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD--RSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (771)
Q Consensus 70 ~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~--~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~ 146 (771)
.+|||+|||+|..+..+++. +..+++++|+ +.+++.++++.... ..+++++.+|+.+ +++ ++||+|++..++|+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~ 245 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIGD 245 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhccC
Confidence 89999999999999999887 3348999999 99999887765432 2579999999987 555 68999999999998
Q ss_pred ccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 147 l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+.+.. ...++++++++|+|||++++.+..
T Consensus 246 ~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 246 LDEAA-----SLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp CCHHH-----HHHHHHHHHHHSCTTCEEEEEECC
T ss_pred CCHHH-----HHHHHHHHHHhcCCCCEEEEEEec
Confidence 76543 569999999999999999999865
No 197
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.08 E-value=3.5e-10 Score=117.21 Aligned_cols=113 Identities=14% Similarity=0.080 Sum_probs=84.7
Q ss_pred CCCeEEEEcCCcchhHHHHHhc---CCCeEEEEcCCHHHHHHHHHHhhcC---CC--C----------------------
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA---GFHGITNVDFSKVVISDMLRRNVRD---RS--D---------------------- 117 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~---g~~~V~~vDiS~~~i~~~~~~~~~~---~~--~---------------------- 117 (771)
++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.+++..... +. +
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 5679999999999999999876 2348999999999999887655332 11 1
Q ss_pred ---cE-------------EEEeecCCCCC-----CCCCccEEEeccccccccCcc--cchHHHHHHHHHHHHccccCeEE
Q 004164 118 ---MR-------------WRVMDMTSMQF-----MDETFDVILDKGGLDALMEPE--LGHKLGNQYLSEVKRLLKSGGKF 174 (771)
Q Consensus 118 ---i~-------------~~~~D~~~l~~-----~~~sFDlVi~~~~l~~l~~~~--~~~~~~~~~l~~i~rvLkpGG~~ 174 (771)
++ +.++|+.+... ...+||+|+++..+....... .+......++.++.++|+|||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 66 99999987431 345899999987665543311 11234779999999999999999
Q ss_pred EEEEcC
Q 004164 175 VCLTLA 180 (771)
Q Consensus 175 ii~~~~ 180 (771)
+++...
T Consensus 211 ~~~~~~ 216 (250)
T 1o9g_A 211 AVTDRS 216 (250)
T ss_dssp EEEESS
T ss_pred EEeCcc
Confidence 996554
No 198
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.08 E-value=3.1e-10 Score=116.10 Aligned_cols=118 Identities=13% Similarity=0.118 Sum_probs=92.0
Q ss_pred chhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcC-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeec
Q 004164 49 EWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDM 125 (771)
Q Consensus 49 ~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g-~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~ 125 (771)
..+.....+..++.. .++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.++++....+ .++.++++|+
T Consensus 38 ~~~~~~~~l~~~~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 114 (233)
T 2gpy_A 38 MDLLGMESLLHLLKM---AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDA 114 (233)
T ss_dssp CCHHHHHHHHHHHHH---HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCG
T ss_pred cCHHHHHHHHHHHhc---cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCH
Confidence 344455556655543 467899999999999999999873 3599999999999998887765544 4699999999
Q ss_pred CCC-CCC--CCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 126 TSM-QFM--DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 126 ~~l-~~~--~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
.+. +.. +++||+|++...... ...+++++.++|+|||++++.+.
T Consensus 115 ~~~~~~~~~~~~fD~I~~~~~~~~----------~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 115 LQLGEKLELYPLFDVLFIDAAKGQ----------YRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp GGSHHHHTTSCCEEEEEEEGGGSC----------HHHHHHHHGGGEEEEEEEEEETT
T ss_pred HHHHHhcccCCCccEEEECCCHHH----------HHHHHHHHHHHcCCCeEEEEEcC
Confidence 875 332 578999998665431 45899999999999999998753
No 199
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.08 E-value=5.7e-10 Score=118.02 Aligned_cols=105 Identities=14% Similarity=0.093 Sum_probs=82.9
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcC-CHHHHHHHHHHh-----hcCC------CCcEEEEeecCCCC--C--
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDF-SKVVISDMLRRN-----VRDR------SDMRWRVMDMTSMQ--F-- 130 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDi-S~~~i~~~~~~~-----~~~~------~~i~~~~~D~~~l~--~-- 130 (771)
.++.+|||+|||+|.++..++..|..+|+++|+ |+.+++.+++.. ...+ .++++...|..+.. +
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 367899999999999999999888779999999 899999887765 2222 36888877765531 2
Q ss_pred --CCCCccEEEeccccccccCcccchHHHHHHHHHHHHccc---c--CeEEEEEE
Q 004164 131 --MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLK---S--GGKFVCLT 178 (771)
Q Consensus 131 --~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLk---p--GG~~ii~~ 178 (771)
.+++||+|++..++++... ...+++.+.++|+ | ||+++++.
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~~~-------~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFHQA-------HDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp HHSCSSBSEEEEESCCSCGGG-------HHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred hccCCCCCEEEEeCcccChHH-------HHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 3578999999888887543 5589999999999 9 99877653
No 200
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.08 E-value=5.7e-10 Score=114.08 Aligned_cols=127 Identities=14% Similarity=0.053 Sum_probs=98.0
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC-CeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEeccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGG 143 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~-~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~ 143 (771)
+++.+|||||||+|.++..++..+. .+|+++|+++.+++.+++.....+ .++++.++|..+...+++.||+|+..|.
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm 99 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGM 99 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCC
Confidence 3678999999999999999999864 589999999999998877765554 4699999999887655557999987665
Q ss_pred cccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcchhhcchhhhhccCcEEEEeecC
Q 004164 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIP 204 (771)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~~~~~l~~~~~~~w~~~~~~i~ 204 (771)
...+ +..++.++.+.|+++|+|++............+ ...+|.+.-..+-
T Consensus 100 Gg~l---------I~~IL~~~~~~l~~~~~lIlqp~~~~~~lr~~L--~~~Gf~i~~E~lv 149 (230)
T 3lec_A 100 GGRL---------IADILNNDIDKLQHVKTLVLQPNNREDDLRKWL--AANDFEIVAEDIL 149 (230)
T ss_dssp CHHH---------HHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHH--HHTTEEEEEEEEE
T ss_pred chHH---------HHHHHHHHHHHhCcCCEEEEECCCChHHHHHHH--HHCCCEEEEEEEE
Confidence 4432 568999999999999999998865433222111 1348888776664
No 201
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.08 E-value=9.8e-10 Score=112.99 Aligned_cols=111 Identities=14% Similarity=0.163 Sum_probs=88.8
Q ss_pred HHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCC
Q 004164 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMD 132 (771)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~ 132 (771)
..+...+.. .++.+|||+|||+|.++..+++. ..+|+++|+++.+++.+++.....+ +++.+...|+.+..+++
T Consensus 81 ~~~~~~~~~---~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 156 (248)
T 2yvl_A 81 FYIALKLNL---NKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPE 156 (248)
T ss_dssp HHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCT
T ss_pred HHHHHhcCC---CCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCC
Confidence 345555543 57889999999999999999988 4499999999999998877765444 57999999998854366
Q ss_pred CCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 133 ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 133 ~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
++||+|++. ..++ ..+++++.++|+|||++++.....
T Consensus 157 ~~~D~v~~~-----~~~~-------~~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 157 GIFHAAFVD-----VREP-------WHYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp TCBSEEEEC-----SSCG-------GGGHHHHHHHBCTTCEEEEEESSH
T ss_pred CcccEEEEC-----CcCH-------HHHHHHHHHHcCCCCEEEEEeCCH
Confidence 789999973 2232 267999999999999999998753
No 202
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.07 E-value=5.4e-10 Score=117.62 Aligned_cols=110 Identities=15% Similarity=0.234 Sum_probs=88.5
Q ss_pred HHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCC
Q 004164 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFM 131 (771)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~ 131 (771)
.+...+.. .++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.+++.....+ .++++..+|+.+. ++
T Consensus 103 ~i~~~~~~---~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~ 178 (277)
T 1o54_A 103 FIAMMLDV---KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FD 178 (277)
T ss_dssp HHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CS
T ss_pred HHHHHhCC---CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-cc
Confidence 34444443 57889999999999999999987 4 4699999999999998877765444 4789999999886 66
Q ss_pred CCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 132 DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 132 ~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
+++||+|++. .+++ ..++.++.++|+|||++++.+...
T Consensus 179 ~~~~D~V~~~-----~~~~-------~~~l~~~~~~L~pgG~l~~~~~~~ 216 (277)
T 1o54_A 179 EKDVDALFLD-----VPDP-------WNYIDKCWEALKGGGRFATVCPTT 216 (277)
T ss_dssp CCSEEEEEEC-----CSCG-------GGTHHHHHHHEEEEEEEEEEESSH
T ss_pred CCccCEEEEC-----CcCH-------HHHHHHHHHHcCCCCEEEEEeCCH
Confidence 6789999973 2332 277999999999999999998753
No 203
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.07 E-value=3.2e-10 Score=116.27 Aligned_cols=101 Identities=18% Similarity=0.289 Sum_probs=86.3
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHH-hhccCCccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVR-EMKSSSATDEM 616 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~-~~~~~~~~~~~ 616 (771)
.+.+||+||+|+|..+.++...+|..+|++||+++.+++.|++++ ++ .++++++.+|+.+++. ...
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~-------- 140 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHF--ENQVRIIEGNALEQFENVND-------- 140 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTC--TTTEEEEESCGGGCHHHHTT--------
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECCHHHHHHhhcc--------
Confidence 457999999999999999999888889999999999999999987 43 4689999999998876 432
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEE
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 688 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~N 688 (771)
.+||+|++|....+ ...+|+.+.+.|+|||+|++.
T Consensus 141 ------------------------~~fD~V~~~~~~~~-------------~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 141 ------------------------KVYDMIFIDAAKAQ-------------SKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp ------------------------SCEEEEEEETTSSS-------------HHHHHHHHGGGEEEEEEEEEE
T ss_pred ------------------------CCccEEEEcCcHHH-------------HHHHHHHHHHhcCCCeEEEEe
Confidence 57999999854321 267999999999999999984
No 204
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.07 E-value=3e-10 Score=115.89 Aligned_cols=115 Identities=15% Similarity=0.196 Sum_probs=89.4
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-CC------CeEEEEcCCHHHHHHHHHHhhcC------CCC
Q 004164 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GF------HGITNVDFSKVVISDMLRRNVRD------RSD 117 (771)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g~------~~V~~vDiS~~~i~~~~~~~~~~------~~~ 117 (771)
+.+...+.+.+.. ...++.+|||+|||+|.++..+++. +. .+|+++|+++.+++.++++.... ..+
T Consensus 68 p~~~~~~~~~l~~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 146 (227)
T 1r18_A 68 PHMHAFALEYLRD-HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQ 146 (227)
T ss_dssp HHHHHHHHHHTTT-TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHh-hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCc
Confidence 3444555666531 1257889999999999999999885 42 58999999999999887766443 357
Q ss_pred cEEEEeecCCCCCCC-CCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 118 MRWRVMDMTSMQFMD-ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 118 i~~~~~D~~~l~~~~-~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+++.++|+.+ ++++ ++||+|++...++++ +.++.++|||||++++....
T Consensus 147 v~~~~~d~~~-~~~~~~~fD~I~~~~~~~~~-------------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 147 LLIVEGDGRK-GYPPNAPYNAIHVGAAAPDT-------------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEEEESCGGG-CCGGGCSEEEEEECSCBSSC-------------CHHHHHTEEEEEEEEEEESC
T ss_pred eEEEECCccc-CCCcCCCccEEEECCchHHH-------------HHHHHHHhcCCCEEEEEEec
Confidence 9999999987 4444 789999998888765 36789999999999988754
No 205
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.07 E-value=5.1e-10 Score=110.86 Aligned_cols=107 Identities=23% Similarity=0.250 Sum_probs=79.9
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-CC---------CeEEEEcCCHHHHHHHHHHhhcCCCCcEEE-EeecCCCC------
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDA-GF---------HGITNVDFSKVVISDMLRRNVRDRSDMRWR-VMDMTSMQ------ 129 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~-g~---------~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~-~~D~~~l~------ 129 (771)
.++.+|||+|||+|.++..+++. +. .+|+++|+|+.. ..++++++ .+|+.+.+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----------~~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----------PLEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----------CCTTCEEECSCCTTSHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----------cCCCCeEEEeccCCCHHHHHHHH
Confidence 46789999999999999999987 53 589999999821 12568899 89987653
Q ss_pred --CCCCCccEEEeccccccccCcccc----hHHHHHHHHHHHHccccCeEEEEEEcCcch
Q 004164 130 --FMDETFDVILDKGGLDALMEPELG----HKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (771)
Q Consensus 130 --~~~~sFDlVi~~~~l~~l~~~~~~----~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~ 183 (771)
+++++||+|++..+++........ ......+++++.++|+|||+|++..+..+.
T Consensus 91 ~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 150 (196)
T 2nyu_A 91 EVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQ 150 (196)
T ss_dssp HHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGG
T ss_pred HhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCcc
Confidence 345689999997765543221100 111358899999999999999999876543
No 206
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.06 E-value=3e-09 Score=115.76 Aligned_cols=176 Identities=15% Similarity=0.144 Sum_probs=110.3
Q ss_pred chhHHHHHHHHhhCCC-CCCCCCeEEEEcCCcchhHHHHHhcCC------CeEEEEcCCHHHHHHHHHHhhcCCCCcEEE
Q 004164 49 EWPQLRDPLISLIGAP-TSSPPPQILVPGCGNSRLSEHLYDAGF------HGITNVDFSKVVISDMLRRNVRDRSDMRWR 121 (771)
Q Consensus 49 ~~~~l~~~l~~~l~~~-~~~~~~~ILDiGCG~G~ls~~La~~g~------~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~ 121 (771)
....+...+..++... .+.++.+|||+|||+|.++..+++... .+++|+|+++.+++.++......+.++.+.
T Consensus 110 TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~ 189 (344)
T 2f8l_A 110 TPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLL 189 (344)
T ss_dssp CCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEE
T ss_pred ChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEE
Confidence 3345544444443210 113568999999999999998887631 489999999999998877654444578999
Q ss_pred EeecCCCCCCCCCccEEEeccccccccCccc----------c-hHHHHHHHHHHHHccccCeEEEEEEcCc---chhhcc
Q 004164 122 VMDMTSMQFMDETFDVILDKGGLDALMEPEL----------G-HKLGNQYLSEVKRLLKSGGKFVCLTLAE---SHVLGL 187 (771)
Q Consensus 122 ~~D~~~l~~~~~sFDlVi~~~~l~~l~~~~~----------~-~~~~~~~l~~i~rvLkpGG~~ii~~~~~---~~~~~~ 187 (771)
++|..... ..++||+|+++..+.++...+. + ......++..+.+.|+|||+++++.... ......
T Consensus 190 ~~D~l~~~-~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ 268 (344)
T 2f8l_A 190 HQDGLANL-LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAK 268 (344)
T ss_dssp ESCTTSCC-CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHH
T ss_pred ECCCCCcc-ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHH
Confidence 99987643 4578999999988765532210 0 0012368999999999999999987431 000112
Q ss_pred hhhhh-ccCcEEEEeecCCCCCCCCCCccEEEEEEEcCC
Q 004164 188 LFPKF-RFGWKMSVHAIPQKSSSEPSLQTFMVVADKENS 225 (771)
Q Consensus 188 l~~~~-~~~w~~~~~~i~~~~~~~~~l~~f~~v~~k~~~ 225 (771)
+...+ ..+|...+..++...-........+++.+|.+.
T Consensus 269 ir~~l~~~~~~~~ii~lp~~~F~~~~~~~~i~vl~k~~~ 307 (344)
T 2f8l_A 269 VDKFIKKNGHIEGIIKLPETLFKSEQARKSILILEKADV 307 (344)
T ss_dssp HHHHHHHHEEEEEEEECCGGGSCC-CCCEEEEEEEECCT
T ss_pred HHHHHHhCCeEEEeeeCChhhccCCCCceEEEEEECCCC
Confidence 22222 224544455554322222335557777777554
No 207
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.06 E-value=2.5e-10 Score=120.91 Aligned_cols=97 Identities=16% Similarity=0.200 Sum_probs=74.5
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEE-EEeecCCCC---CCCCCccEEEecc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRW-RVMDMTSMQ---FMDETFDVILDKG 142 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~-~~~D~~~l~---~~~~sFDlVi~~~ 142 (771)
.++.+|||+|||||.++..|++.|..+|+|+|+|+.|++.+.+. .+++.. ...|+..++ ++..+||+|++..
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~----~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~ 159 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQ----DDRVRSMEQYNFRYAEPVDFTEGLPSFASIDV 159 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHT----CTTEEEECSCCGGGCCGGGCTTCCCSEEEECC
T ss_pred ccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHh----CcccceecccCceecchhhCCCCCCCEEEEEe
Confidence 35679999999999999999999888999999999999864332 233322 223444332 3445699999887
Q ss_pred ccccccCcccchHHHHHHHHHHHHccccCeEEEEE
Q 004164 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 177 (771)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~ 177 (771)
+++++ ..+|.+++++|+|||+++++
T Consensus 160 sf~sl----------~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 160 SFISL----------NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp SSSCG----------GGTHHHHHHHSCTTCEEEEE
T ss_pred eHhhH----------HHHHHHHHHHcCcCCEEEEE
Confidence 77654 27899999999999999997
No 208
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.06 E-value=2.4e-10 Score=116.05 Aligned_cols=103 Identities=12% Similarity=0.090 Sum_probs=82.1
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC-C-CCC----CCccE
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM-Q-FMD----ETFDV 137 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l-~-~~~----~sFDl 137 (771)
++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.+++.....+ .+++++++|+.+. + +.. ++||+
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 5689999999999999999987 2 4699999999999999988775544 4599999998654 2 211 78999
Q ss_pred EEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 138 ILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 138 Vi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
|+....... ...+++++.++|+|||++++.+..
T Consensus 144 v~~~~~~~~----------~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 144 IYIDADKAN----------TDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp EEECSCGGG----------HHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEECCCHHH----------HHHHHHHHHHhcCCCcEEEEeCCC
Confidence 996543211 558999999999999999987654
No 209
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.06 E-value=8e-10 Score=117.67 Aligned_cols=109 Identities=20% Similarity=0.238 Sum_probs=81.4
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhc------CCCCcEEEEeecCCC-CCCCCCccEEE
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR------DRSDMRWRVMDMTSM-QFMDETFDVIL 139 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~------~~~~i~~~~~D~~~l-~~~~~sFDlVi 139 (771)
+..+|||||||+|.++..+++. +..+|+++|+++.+++.+++.+.. ..++++++++|+.+. ...+++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 4679999999999999999987 456899999999999988776532 246899999998875 34568999999
Q ss_pred eccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 140 DKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 140 ~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
+.......+... -....++++++++|+|||++++...
T Consensus 163 ~D~~~p~~~~~~---l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 163 SDCTDPIGPGES---LFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp ECC-------------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECCCCccCcchh---ccHHHHHHHHHHhcCCCCEEEEecC
Confidence 855432211110 0015899999999999999998763
No 210
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.05 E-value=3.8e-10 Score=114.49 Aligned_cols=104 Identities=14% Similarity=0.058 Sum_probs=82.0
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC-C-CC---CCCccE
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM-Q-FM---DETFDV 137 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l-~-~~---~~sFDl 137 (771)
.++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.+++.....+ .+++++++|+.+. + +. .++||+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 35789999999999999999987 2 3599999999999998887765444 3699999999764 1 11 267999
Q ss_pred EEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 138 ILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 138 Vi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
|++...... ...++.++.++|+|||++++.+..
T Consensus 137 v~~d~~~~~----------~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 137 IFIDADKQN----------NPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp EEECSCGGG----------HHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EEEcCCcHH----------HHHHHHHHHHhcCCCcEEEEeCCC
Confidence 997654222 458999999999999988876543
No 211
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.05 E-value=1.4e-10 Score=119.99 Aligned_cols=107 Identities=12% Similarity=0.248 Sum_probs=87.8
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
.+.+||+||+|+|..+.+|...+| ..+|++||++|.+++.|++++ |+ .++++++++|+.+++......
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~gda~~~l~~~~~~------ 131 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ--EHKIKLRLGPALDTLHSLLNE------ 131 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC--TTTEEEEESCHHHHHHHHHHH------
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHHHhhc------
Confidence 457999999999999999999886 679999999999999999998 54 468999999999998765310
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEe
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 689 (771)
.....||+|++|.... -...+|+.+.+.|+|||++++.-
T Consensus 132 ---------------------~~~~~fD~V~~d~~~~-------------~~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 132 ---------------------GGEHQFDFIFIDADKT-------------NYLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp ---------------------HCSSCEEEEEEESCGG-------------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ---------------------cCCCCEeEEEEcCChH-------------HhHHHHHHHHHhcCCCeEEEEEC
Confidence 0025799999986422 12678999999999999999853
No 212
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.04 E-value=9.2e-10 Score=113.44 Aligned_cols=126 Identities=13% Similarity=0.024 Sum_probs=95.6
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC-CeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEeccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGG 143 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~-~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~ 143 (771)
+++.+|||||||+|.++..|+..+. .+|+++|+++.+++.+++.....+ .++++.++|..+...++++||+|+..+.
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviagm 99 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGM 99 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCC
Confidence 3678999999999999999999864 589999999999999877765554 3599999999886544446999987554
Q ss_pred cccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcchhhcchhhhhccCcEEEEeec
Q 004164 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAI 203 (771)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~~~~~l~~~~~~~w~~~~~~i 203 (771)
... .+..++.++.+.|+++|+|++............+. ..+|.+.-..+
T Consensus 100 Gg~---------lI~~IL~~~~~~L~~~~~lIlq~~~~~~~lr~~L~--~~Gf~i~~E~l 148 (244)
T 3gnl_A 100 GGT---------LIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSE--QNNWLITSEAI 148 (244)
T ss_dssp CHH---------HHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHH--HHTEEEEEEEE
T ss_pred chH---------HHHHHHHHHHHHhCCCCEEEEEcCCChHHHHHHHH--HCCCEEEEEEE
Confidence 433 26689999999999999999988653332222111 33787765554
No 213
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.04 E-value=2.2e-10 Score=118.03 Aligned_cols=112 Identities=13% Similarity=0.136 Sum_probs=84.3
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc----C-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeec
Q 004164 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA----G-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDM 125 (771)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~----g-~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~ 125 (771)
+.....+..++.. .++.+|||||||+|..+..|++. + ..+|+++|+|+.+++.++ ...++++++++|+
T Consensus 67 p~~~~~l~~~l~~---~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~~~v~~~~gD~ 139 (236)
T 2bm8_A 67 PDTQAVYHDMLWE---LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDMENITLHQGDC 139 (236)
T ss_dssp HHHHHHHHHHHHH---HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGCTTEEEEECCS
T ss_pred HHHHHHHHHHHHh---cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccCCceEEEECcc
Confidence 3444455555543 24579999999999999999886 2 359999999998887654 2236899999999
Q ss_pred CCC---CCCC-CCccEEEeccccccccCcccchHHHHHHHHHHHH-ccccCeEEEEEEc
Q 004164 126 TSM---QFMD-ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKR-LLKSGGKFVCLTL 179 (771)
Q Consensus 126 ~~l---~~~~-~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~r-vLkpGG~~ii~~~ 179 (771)
.+. ++.+ .+||+|++.+. + . . ...++.++.+ +|||||++++.+.
T Consensus 140 ~~~~~l~~~~~~~fD~I~~d~~-~--~--~-----~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 140 SDLTTFEHLREMAHPLIFIDNA-H--A--N-----TFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp SCSGGGGGGSSSCSSEEEEESS-C--S--S-----HHHHHHHHHHHTCCTTCEEEECSC
T ss_pred hhHHHHHhhccCCCCEEEECCc-h--H--h-----HHHHHHHHHHhhCCCCCEEEEEeC
Confidence 984 5433 47999997654 2 1 2 5689999997 9999999999754
No 214
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.04 E-value=3.1e-10 Score=123.64 Aligned_cols=103 Identities=13% Similarity=0.076 Sum_probs=81.8
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC-CCeEEEEcCCHHHHHHHHHHhh--cCCCCcEEEEeecCCCCCCCCCccEEEeccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNV--RDRSDMRWRVMDMTSMQFMDETFDVILDKGG 143 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g-~~~V~~vDiS~~~i~~~~~~~~--~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~ 143 (771)
.+..+|||||||+|.++..+++.. ..+++++|+++ ++. +++.. ...++++++.+|+. .+++ +||+|++..+
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~-~~~--~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~v 256 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAE-VVA--RHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKRI 256 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHH-HHT--TCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEESC
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHH-Hhh--cccccccCCCCCeEEEecCCC-CCCC--CCcEEEEehh
Confidence 467899999999999999998873 34799999954 443 22211 12357999999997 3445 8999999999
Q ss_pred cccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+|++.+.+ ..++|++++++|||||++++.+..
T Consensus 257 lh~~~d~~-----~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 257 LHNWGDED-----SVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp GGGSCHHH-----HHHHHHHHHHTCCTTCEEEEEECC
T ss_pred ccCCCHHH-----HHHHHHHHHHhcCCCCEEEEEEec
Confidence 99987654 569999999999999999998865
No 215
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.03 E-value=5.4e-10 Score=112.42 Aligned_cols=100 Identities=18% Similarity=0.292 Sum_probs=84.5
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
.+.+||+||+|+|..+..+...+| ..+|++||+++.+++.|++++ ++ .++++++.+|+.+++....
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~-------- 125 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL--IDRVELQVGDPLGIAAGQR-------- 125 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG--GGGEEEEESCHHHHHTTCC--------
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC--CceEEEEEecHHHHhccCC--------
Confidence 457899999999999999999887 779999999999999999887 43 4689999999998865432
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEE
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 688 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~N 688 (771)
. ||+|++|.... ....+++.+.+.|+|||++++.
T Consensus 126 ------------------------~-fD~v~~~~~~~-------------~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 126 ------------------------D-IDILFMDCDVF-------------NGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp ------------------------S-EEEEEEETTTS-------------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred ------------------------C-CCEEEEcCChh-------------hhHHHHHHHHHhcCCCeEEEEE
Confidence 5 99999985322 1278999999999999999984
No 216
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.03 E-value=8.3e-10 Score=118.78 Aligned_cols=121 Identities=15% Similarity=0.043 Sum_probs=89.6
Q ss_pred HHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc--CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCCC
Q 004164 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMDE 133 (771)
Q Consensus 57 l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~--g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~ 133 (771)
+...+.. .++.+|||+|||+|..+..+++. +.++|+++|+|+.+++.++++....+ .++.++++|+.+++..++
T Consensus 110 ~~~~l~~---~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~ 186 (315)
T 1ixk_A 110 PPVALDP---KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNV 186 (315)
T ss_dssp HHHHHCC---CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCC
T ss_pred HHHHhCC---CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccc
Confidence 3445543 57889999999999999999986 23589999999999998877765444 479999999998765567
Q ss_pred CccEEEecc------ccccccCcc------c---chHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 134 TFDVILDKG------GLDALMEPE------L---GHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 134 sFDlVi~~~------~l~~l~~~~------~---~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+||+|++.. ++...++.. . .......++.++.++|||||++++++.+
T Consensus 187 ~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 187 EFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp CEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 899999742 233211100 0 0011368999999999999999998865
No 217
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.03 E-value=3.8e-10 Score=113.53 Aligned_cols=100 Identities=16% Similarity=0.206 Sum_probs=79.8
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC-CCCCCCccEEEecc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM-QFMDETFDVILDKG 142 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l-~~~~~sFDlVi~~~ 142 (771)
++.+|||+|||+|..+..+++. + ..+|+++|+|+.+++.+++.....+ .+++++++|+.+. +..++ ||+|++..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 4679999999999999999887 2 3599999999999998877664433 3689999999764 44446 99999763
Q ss_pred ccccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
.. .. ...+++++.++|+|||++++.+
T Consensus 135 ~~-----~~-----~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 DV-----FN-----GADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp TT-----SC-----HHHHHHHHGGGEEEEEEEEEES
T ss_pred Ch-----hh-----hHHHHHHHHHhcCCCeEEEEEC
Confidence 21 11 5689999999999999998854
No 218
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.03 E-value=9e-11 Score=120.75 Aligned_cols=97 Identities=16% Similarity=0.211 Sum_probs=66.2
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhc----CCCCcEEEE-eecCCCCCCCCCccEEEec
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR----DRSDMRWRV-MDMTSMQFMDETFDVILDK 141 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~----~~~~i~~~~-~D~~~l~~~~~sFDlVi~~ 141 (771)
.++.+|||||||+|.++..|++.|..+|+|+|+|+.|++.++++... ...++.+.. .|+....++..+||+++
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~-- 113 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSF-- 113 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSS--
T ss_pred CCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEh--
Confidence 35679999999999999999999867999999999999876554311 112333322 22221112233444443
Q ss_pred cccccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 142 GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 142 ~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
..+ ..++.+++++|||||++++..
T Consensus 114 ---~~l----------~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 114 ---ISL----------DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp ---SCG----------GGTHHHHHHHSCTTCEEEEEE
T ss_pred ---hhH----------HHHHHHHHHhccCCCEEEEEE
Confidence 322 278999999999999999864
No 219
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.02 E-value=1.3e-09 Score=119.50 Aligned_cols=101 Identities=19% Similarity=0.073 Sum_probs=84.7
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEeccccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~ 145 (771)
.+..+|||||||+|.++..+++. +..+++++|+ +.+++.++ ..++++|+.+|+.+ +++.+ |+|++..++|
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----~~~~v~~~~~D~~~-~~p~~--D~v~~~~vlh 270 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAP-----QFPGVTHVGGDMFK-EVPSG--DTILMKWILH 270 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----CCTTEEEEECCTTT-CCCCC--SEEEEESCGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhh-----hcCCeEEEeCCcCC-CCCCC--CEEEehHHhc
Confidence 46789999999999999999886 3358999999 77775442 23689999999988 77754 9999999999
Q ss_pred cccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 146 ~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
++.+.+ ..++|++++++|+|||++++.+...
T Consensus 271 ~~~d~~-----~~~~L~~~~~~L~pgG~l~i~e~~~ 301 (364)
T 3p9c_A 271 DWSDQH-----CATLLKNCYDALPAHGKVVLVQCIL 301 (364)
T ss_dssp GSCHHH-----HHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred cCCHHH-----HHHHHHHHHHHcCCCCEEEEEEecc
Confidence 886544 6799999999999999999998753
No 220
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.02 E-value=8.4e-10 Score=111.99 Aligned_cols=108 Identities=19% Similarity=0.306 Sum_probs=88.1
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
.+.+||+||+|+|..+.++...+| ..+|++||+++.+++.|++.+ |+ .++++++++|+.+++.....
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~------- 134 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL--SDKIGLRLSPAKDTLAELIH------- 134 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCHHHHHHHHHT-------
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC--CCceEEEeCCHHHHHHHhhh-------
Confidence 457999999999999999999887 789999999999999999998 44 46799999999998876541
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEec
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 690 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 690 (771)
.....+||+|++|.... ....+++.+.+.|+|||+|++.-+
T Consensus 135 --------------------~~~~~~fD~v~~~~~~~-------------~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 135 --------------------AGQAWQYDLIYIDADKA-------------NTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp --------------------TTCTTCEEEEEECSCGG-------------GHHHHHHHHHHHEEEEEEEEEECS
T ss_pred --------------------ccCCCCccEEEECCCHH-------------HHHHHHHHHHHhcCCCcEEEEeCC
Confidence 00125799999976321 126799999999999999998643
No 221
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.02 E-value=8.3e-10 Score=119.61 Aligned_cols=132 Identities=19% Similarity=0.059 Sum_probs=93.4
Q ss_pred cccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC-C--CcEEEE
Q 004164 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-S--DMRWRV 122 (771)
Q Consensus 46 w~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~-~--~i~~~~ 122 (771)
|+.+.......+.+++.. ..++.+|||+|||+|.++..++..|. +|+++|+|+.+++.+++.+...+ . ++++++
T Consensus 133 ~f~dq~~~~~~l~~~~~~--~~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~ 209 (332)
T 2igt_A 133 VFPEQIVHWEWLKNAVET--ADRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWIC 209 (332)
T ss_dssp CCGGGHHHHHHHHHHHHH--SSSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEEC
T ss_pred echHHHHHHHHHHHHHHh--cCCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEE
Confidence 444444445556666631 02567999999999999999999888 99999999999998877664433 2 489999
Q ss_pred eecCCCCC----CCCCccEEEeccccccccCc---ccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 123 MDMTSMQF----MDETFDVILDKGGLDALMEP---ELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 123 ~D~~~l~~----~~~sFDlVi~~~~l~~l~~~---~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+|+.++.. ..++||+|++.-........ .........++.++.++|+|||++++....
T Consensus 210 ~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 210 EDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp SCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred CcHHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 99987531 14689999985432221100 001123678999999999999997776644
No 222
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.01 E-value=1.1e-09 Score=109.35 Aligned_cols=160 Identities=10% Similarity=0.071 Sum_probs=93.0
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
..+.+||++|+|+|.++..+...+|..++++||+++.+++.|++.+..... +++++.+|+.+.+.....
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~---------- 97 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLIERAE---------- 97 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHHHHHHHHHH----------
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhhhhhh----------
Confidence 456799999999999999999999888999999999999999998854222 789999999997665220
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcc-----------------cHHHHHHHHHccCCC
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV-----------------EGSFLLTVKDALSEQ 682 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~-----------------~~~fl~~~~~~L~~~ 682 (771)
...+||+|+.|.--... ..+...+.... -..+++.+++.|+||
T Consensus 98 -------------------~~~~fD~i~~npp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 157 (215)
T 4dzr_A 98 -------------------RGRPWHAIVSNPPYIPT-GEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARG 157 (215)
T ss_dssp -------------------TTCCBSEEEECCCCCC-------------------------CTTHHHHHHHTCCGGGBCSS
T ss_pred -------------------ccCcccEEEECCCCCCC-ccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCC
Confidence 12579999996311000 00000001100 178899999999999
Q ss_pred cE-EEEEeccCChhHHHHHHHHHHHhccceEEeeecCCccEEEEEecCC
Q 004164 683 GL-FIVNLVSRSQATKDMVISRMKMVFNHLFCLQLEEDVNLVLFGLSSE 730 (771)
Q Consensus 683 Gi-lv~Nl~~~~~~~~~~v~~~l~~vF~~v~~~~~~~~~N~Vl~a~~~~ 730 (771)
|. +++.+..........++..+..-|..+.......+...++++.+..
T Consensus 158 G~l~~~~~~~~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~~~~ 206 (215)
T 4dzr_A 158 RAGVFLEVGHNQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTREP 206 (215)
T ss_dssp SEEEEEECTTSCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEEECC
T ss_pred CeEEEEEECCccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEEEcC
Confidence 99 6665543343333333333345576666666555667888887654
No 223
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.01 E-value=2.7e-10 Score=111.23 Aligned_cols=88 Identities=18% Similarity=0.219 Sum_probs=75.9
Q ss_pred CCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCC---CCCCccEEEecc
Q 004164 66 SSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQF---MDETFDVILDKG 142 (771)
Q Consensus 66 ~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~---~~~sFDlVi~~~ 142 (771)
..++.+|||+|||. +++|+|+.|++.++++.. .++++.++|+.++++ ++++||+|++..
T Consensus 10 ~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~---~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~ 71 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTG---NEGRVSVENIKQLLQSAHKESSFDIILSGL 71 (176)
T ss_dssp CCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTT---TTSEEEEEEGGGGGGGCCCSSCEEEEEECC
T ss_pred CCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhcc---cCcEEEEechhcCccccCCCCCEeEEEECC
Confidence 36789999999996 239999999998887753 249999999999887 789999999999
Q ss_pred ccccc-cCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 143 GLDAL-MEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 143 ~l~~l-~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
+++++ .+. ..++++++|+|||||+|++..
T Consensus 72 ~l~~~~~~~-------~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 72 VPGSTTLHS-------AEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp STTCCCCCC-------HHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhcccCH-------HHHHHHHHHHCCCCEEEEEEc
Confidence 99998 554 489999999999999999954
No 224
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.01 E-value=1.2e-09 Score=119.98 Aligned_cols=100 Identities=18% Similarity=0.096 Sum_probs=84.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEeccccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~ 145 (771)
.+..+|||||||+|.++..+++. +..+++++|+ +.+++.++ ..++++|+.+|+.+ +++++ |+|++..++|
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----~~~~v~~~~~d~~~-~~p~~--D~v~~~~vlh 272 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAP-----AFSGVEHLGGDMFD-GVPKG--DAIFIKWICH 272 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----CCTTEEEEECCTTT-CCCCC--SEEEEESCGG
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhh-----hcCCCEEEecCCCC-CCCCC--CEEEEechhh
Confidence 45689999999999999999887 3358999999 87776442 23689999999987 67654 9999999999
Q ss_pred cccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 146 ~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
++.+.+ ..++|++++++|+|||++++.+..
T Consensus 273 ~~~~~~-----~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 273 DWSDEH-----CLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp GBCHHH-----HHHHHHHHHHHSCTTCEEEEEECC
T ss_pred cCCHHH-----HHHHHHHHHHHcCCCCEEEEEEec
Confidence 887654 678999999999999999999865
No 225
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.01 E-value=4.7e-10 Score=118.91 Aligned_cols=122 Identities=16% Similarity=0.111 Sum_probs=84.7
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCC--CcEEEEeecCCCC
Q 004164 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSMQ 129 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~--~i~~~~~D~~~l~ 129 (771)
.+...+.+++.. .++.+|||+|||+|.++..++..+..+|+++|+|+.+++.+++.....+. +++|+++|+.+.
T Consensus 110 ~lv~~~l~~~~~---~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~- 185 (284)
T 1nv8_A 110 ELVELALELIRK---YGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP- 185 (284)
T ss_dssp HHHHHHHHHHHH---HTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-
T ss_pred HHHHHHHHHhcc---cCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-
Confidence 344445555432 25679999999999999999988435999999999999988777655442 499999999873
Q ss_pred CCCCCc---cEEEeccccccccC---cc--cchHH-------HHHHHHHHH-HccccCeEEEEEE
Q 004164 130 FMDETF---DVILDKGGLDALME---PE--LGHKL-------GNQYLSEVK-RLLKSGGKFVCLT 178 (771)
Q Consensus 130 ~~~~sF---DlVi~~~~l~~l~~---~~--~~~~~-------~~~~l~~i~-rvLkpGG~~ii~~ 178 (771)
++ ++| |+|+++-....... ++ ..+.. -..+++++. +.|+|||++++..
T Consensus 186 ~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 186 FK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp GG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred cc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 33 579 99999722211000 00 00000 126889999 9999999999753
No 226
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.01 E-value=1.6e-09 Score=110.49 Aligned_cols=126 Identities=14% Similarity=0.124 Sum_probs=94.1
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCC-CeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCC-CccEEEecc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDE-TFDVILDKG 142 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~-~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~-sFDlVi~~~ 142 (771)
+++.+|||||||+|.++..++..+. .+|+++|+++.+++.+++.....+ .++++.++|..+. ++.+ .||+|+..+
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~-l~~~~~~D~IviaG 92 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAA-FEETDQVSVITIAG 92 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG-CCGGGCCCEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhh-cccCcCCCEEEEcC
Confidence 3678999999999999999999864 589999999999998877765555 3699999998642 2323 699999765
Q ss_pred ccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcchhhcchhhhhccCcEEEEeecC
Q 004164 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIP 204 (771)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~~~~~l~~~~~~~w~~~~~~i~ 204 (771)
.... .+..++.++...|+++|+|++....+.......+ ...+|.+.-..+-
T Consensus 93 ~Gg~---------~i~~Il~~~~~~L~~~~~lVlq~~~~~~~vr~~L--~~~Gf~i~~e~lv 143 (225)
T 3kr9_A 93 MGGR---------LIARILEEGLGKLANVERLILQPNNREDDLRIWL--QDHGFQIVAESIL 143 (225)
T ss_dssp ECHH---------HHHHHHHHTGGGCTTCCEEEEEESSCHHHHHHHH--HHTTEEEEEEEEE
T ss_pred CChH---------HHHHHHHHHHHHhCCCCEEEEECCCCHHHHHHHH--HHCCCEEEEEEEE
Confidence 4332 2568999999999999999997764333222221 1347887766653
No 227
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.01 E-value=8.4e-10 Score=118.15 Aligned_cols=109 Identities=20% Similarity=0.234 Sum_probs=83.3
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhc-----CCCCcEEEEeecCCCCC--CCCCccEEE
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSMQF--MDETFDVIL 139 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~-----~~~~i~~~~~D~~~l~~--~~~sFDlVi 139 (771)
++.+|||||||+|.++..+++. +..+|+++|+++.+++.+++.+.. ..++++++.+|+.++.. .+++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi 174 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVI 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEE
Confidence 5689999999999999999987 456999999999999988776521 24689999999987653 468999999
Q ss_pred eccccccccCcccchHH-HHHHHHHHHHccccCeEEEEEEcC
Q 004164 140 DKGGLDALMEPELGHKL-GNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 140 ~~~~l~~l~~~~~~~~~-~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+..+....+... + -..++++++++|+|||++++....
T Consensus 175 ~d~~~~~~~~~~----l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 175 IDTTDPAGPASK----LFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp EECC-------------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCCCccccchh----hhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 865544322110 0 158899999999999999987644
No 228
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.01 E-value=1.5e-09 Score=114.23 Aligned_cols=103 Identities=8% Similarity=0.022 Sum_probs=85.4
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCCCCccEEEecccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~sFDlVi~~~~l 144 (771)
.++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.+++.+...+ .++.++++|+.+.+. .++||+|++....
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH 196 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc
Confidence 46789999999999999999987 34689999999999998877665544 578999999998743 5789999986543
Q ss_pred ccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
. ...++.++.+.|+|||++++.....
T Consensus 197 ----~-------~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 197 ----K-------THKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp ----S-------GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ----c-------HHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 1 2377999999999999999887754
No 229
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.00 E-value=1e-09 Score=114.88 Aligned_cols=111 Identities=14% Similarity=0.042 Sum_probs=85.1
Q ss_pred CCCeEEEEcCCc--chhHHHHHhc--CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCC----C--CCCcc
Q 004164 68 PPPQILVPGCGN--SRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQF----M--DETFD 136 (771)
Q Consensus 68 ~~~~ILDiGCG~--G~ls~~La~~--g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~----~--~~sFD 136 (771)
...+|||||||+ +..+..+++. +..+|+++|+|+.||+.+++++.... .+++|+++|+.+.+. + .+.||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 346999999997 4445555443 44599999999999999988775432 369999999988521 1 34565
Q ss_pred -----EEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcc
Q 004164 137 -----VILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (771)
Q Consensus 137 -----lVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~ 182 (771)
.|+++.+|||+.+.+. ...++.++.+.|+|||+|++.+++.+
T Consensus 158 ~~~p~av~~~avLH~l~d~~~----p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDD----AVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGC----HHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred cCCcchHHhhhhHhcCCchhh----HHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 6889999999987542 35899999999999999999988754
No 230
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.00 E-value=1.9e-10 Score=121.47 Aligned_cols=108 Identities=15% Similarity=0.086 Sum_probs=77.6
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhc---CCCCcEEE--EeecCCCCCCCCCccEEEec
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR---DRSDMRWR--VMDMTSMQFMDETFDVILDK 141 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~---~~~~i~~~--~~D~~~l~~~~~sFDlVi~~ 141 (771)
.++.+|||+|||+|.++..+++. ++|+|+|+|+ ++..+.++... .+.++.++ ++|+.+++ +++||+|++.
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd 155 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCD 155 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEEC
T ss_pred CCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEEC
Confidence 57889999999999999999988 4899999999 53322111100 01268999 89999876 6899999997
Q ss_pred cccccccCcccchHHHHHHHHHHHHccccCe--EEEEEEcC
Q 004164 142 GGLDALMEPELGHKLGNQYLSEVKRLLKSGG--KFVCLTLA 180 (771)
Q Consensus 142 ~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG--~~ii~~~~ 180 (771)
.+ +..............+|.++.++||||| .|++..+.
T Consensus 156 ~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 156 IG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 76 4332221110001137899999999999 99998877
No 231
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.00 E-value=7.4e-10 Score=116.69 Aligned_cols=121 Identities=18% Similarity=0.066 Sum_probs=89.5
Q ss_pred HHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc--CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCC---
Q 004164 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQF--- 130 (771)
Q Consensus 57 l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~--g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~--- 130 (771)
+..++.. .++.+|||+|||+|..+..+++. +.++|+++|+|+.+++.++++....+ .++.++++|+.+++.
T Consensus 75 ~~~~l~~---~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~ 151 (274)
T 3ajd_A 75 PPIVLNP---REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLL 151 (274)
T ss_dssp HHHHHCC---CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH
T ss_pred HHHHhCC---CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhh
Confidence 4445543 57889999999999999999884 44699999999999998877765544 479999999988754
Q ss_pred -CCCCccEEEeccccccccC----c----c---cchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 131 -MDETFDVILDKGGLDALME----P----E---LGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 131 -~~~sFDlVi~~~~l~~l~~----~----~---~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
..++||+|++......... + + ........++.++.++|||||++++.+.+
T Consensus 152 ~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 152 KNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCS 213 (274)
T ss_dssp HTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred hccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 2578999997632221100 0 0 00011468999999999999999998865
No 232
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.00 E-value=2.1e-09 Score=109.45 Aligned_cols=133 Identities=15% Similarity=0.172 Sum_probs=98.6
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||+||+|+|.++..+....|...|++||+++.+++.|++...-..-.+++++.+|+.+++...-
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~------------ 101 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMI------------ 101 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHS------------
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHc------------
Confidence 45789999999999999999999999999999999999999988521112459999999999877532
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHHHHH
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMV 700 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~v 700 (771)
....||.|++.. +++..........++...|++.+.+.|+|||+|++-. ....+.+.+
T Consensus 102 ------------------~~~~~d~v~~~~--~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t--d~~~~~~~~ 159 (218)
T 3dxy_A 102 ------------------PDNSLRMVQLFF--PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT--DWEPYAEHM 159 (218)
T ss_dssp ------------------CTTCEEEEEEES--CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE--SCHHHHHHH
T ss_pred ------------------CCCChheEEEeC--CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe--CCHHHHHHH
Confidence 136799999843 2221111112234667889999999999999998654 455555555
Q ss_pred HHHHHHh
Q 004164 701 ISRMKMV 707 (771)
Q Consensus 701 ~~~l~~v 707 (771)
...+...
T Consensus 160 ~~~~~~~ 166 (218)
T 3dxy_A 160 LEVMSSI 166 (218)
T ss_dssp HHHHHTS
T ss_pred HHHHHhC
Confidence 6666544
No 233
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.99 E-value=1.2e-09 Score=111.04 Aligned_cols=107 Identities=15% Similarity=0.243 Sum_probs=87.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 615 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~ 615 (771)
..+.+||+||+|+|.++..+...+| ..+|++||+++.+++.|++++ |+ .++++++.+|+.+++......
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~i~~~~~d~~~~~~~~~~~----- 140 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA--EHKIDLRLKPALETLDELLAA----- 140 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC--TTTEEEEESCHHHHHHHHHHT-----
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC--CCeEEEEEcCHHHHHHHHHhc-----
Confidence 3457999999999999999999877 679999999999999999998 44 468999999999988765410
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEE
Q 004164 616 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 688 (771)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~N 688 (771)
....+||+|++|.... ....+++.+.+.|+|||++++.
T Consensus 141 ----------------------~~~~~~D~v~~d~~~~-------------~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 141 ----------------------GEAGTFDVAVVDADKE-------------NCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp ----------------------TCTTCEEEEEECSCST-------------THHHHHHHHHHHEEEEEEEEEE
T ss_pred ----------------------CCCCCccEEEECCCHH-------------HHHHHHHHHHHHcCCCeEEEEE
Confidence 0015799999975422 1268999999999999999984
No 234
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.98 E-value=1.7e-10 Score=119.40 Aligned_cols=116 Identities=11% Similarity=0.046 Sum_probs=87.4
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCC
Q 004164 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~ 127 (771)
.....+..++.. .++.+|||+|||+|..+..|++. + .++|+++|+++.+++.+++.....+ .+++++++|+.+
T Consensus 47 ~~~~~l~~l~~~---~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 123 (242)
T 3r3h_A 47 EQAQFMQMLIRL---TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALD 123 (242)
T ss_dssp HHHHHHHHHHHH---HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHH
T ss_pred HHHHHHHHHHhh---cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 333444444432 35679999999999999999985 2 3599999999999988877765544 479999999976
Q ss_pred CC-CC-----CCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 128 MQ-FM-----DETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 128 l~-~~-----~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
.. .. +++||+|++...... ...+++++.++|+|||++++.+..
T Consensus 124 ~l~~~~~~~~~~~fD~V~~d~~~~~----------~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 124 TLHSLLNEGGEHQFDFIFIDADKTN----------YLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp HHHHHHHHHCSSCEEEEEEESCGGG----------HHHHHHHHHHHEEEEEEEEEECSS
T ss_pred HHHHHhhccCCCCEeEEEEcCChHH----------hHHHHHHHHHhcCCCeEEEEECCc
Confidence 52 11 478999997553211 458899999999999999986543
No 235
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.98 E-value=4.2e-09 Score=108.00 Aligned_cols=108 Identities=17% Similarity=0.282 Sum_probs=87.9
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
.+.+||+||+|+|..+..+...+| ..+|++||++|.+++.|++++ |+ .++++++.+|+.+++.....
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~~d~~~~l~~l~~------- 142 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV--AEKISLRLGPALATLEQLTQ------- 142 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESCHHHHHHHHHT-------
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHHHHh-------
Confidence 457899999999999999999887 679999999999999999987 55 46899999999998877641
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEec
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 690 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 690 (771)
......||+|++|.... ....+++.+.+.|+|||++++.-+
T Consensus 143 --------------------~~~~~~fD~V~~d~~~~-------------~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 143 --------------------GKPLPEFDLIFIDADKR-------------NYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp --------------------SSSCCCEEEEEECSCGG-------------GHHHHHHHHHHTEEEEEEEEEECT
T ss_pred --------------------cCCCCCcCEEEECCCHH-------------HHHHHHHHHHHHcCCCeEEEEeCC
Confidence 00015799999976421 126799999999999999998643
No 236
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.98 E-value=8.2e-10 Score=121.46 Aligned_cols=100 Identities=18% Similarity=0.164 Sum_probs=83.8
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcC-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEeccccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g-~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~ 145 (771)
.+..+|||||||+|.++..+++.. ..+++++|+ +.+++.++ ..++++++.+|+.+ +++. ||+|++..++|
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~-----~~~~v~~~~~d~~~-~~~~--~D~v~~~~~lh 278 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAP-----PLSGIEHVGGDMFA-SVPQ--GDAMILKAVCH 278 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----CCTTEEEEECCTTT-CCCC--EEEEEEESSGG
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhh-----hcCCCEEEeCCccc-CCCC--CCEEEEecccc
Confidence 456899999999999999999874 347899999 87876442 23679999999988 6664 99999999999
Q ss_pred cccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 146 ~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
++.+.+ ...+|++++++|+|||++++.+..
T Consensus 279 ~~~d~~-----~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 279 NWSDEK-----CIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp GSCHHH-----HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cCCHHH-----HHHHHHHHHHhcCCCCEEEEEEec
Confidence 986544 569999999999999999998764
No 237
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.98 E-value=2.1e-10 Score=120.38 Aligned_cols=108 Identities=14% Similarity=0.074 Sum_probs=77.3
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhh---cCCCCcEEE--EeecCCCCCCCCCccEEEec
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNV---RDRSDMRWR--VMDMTSMQFMDETFDVILDK 141 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~---~~~~~i~~~--~~D~~~l~~~~~sFDlVi~~ 141 (771)
.++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+.+... ..+.++.++ ++|+.+++ +++||+|++.
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd 147 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCD 147 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEEC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEe
Confidence 57889999999999999999988 5899999999 4322211100 011268999 89999876 6899999997
Q ss_pred cccccccCcccchHHHHHHHHHHHHccccCe--EEEEEEcC
Q 004164 142 GGLDALMEPELGHKLGNQYLSEVKRLLKSGG--KFVCLTLA 180 (771)
Q Consensus 142 ~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG--~~ii~~~~ 180 (771)
.+ ++......+......+|..+.++|+||| .|++..+.
T Consensus 148 ~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 148 VG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred Cc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 76 4433221110001138899999999999 99998877
No 238
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.97 E-value=9.5e-10 Score=113.09 Aligned_cols=117 Identities=17% Similarity=0.103 Sum_probs=88.8
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeec
Q 004164 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDM 125 (771)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~ 125 (771)
.+.....+..++.. .++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.+++.....+ .++.+.++|+
T Consensus 45 ~~~~~~~l~~l~~~---~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~ 121 (239)
T 2hnk_A 45 SPEEGQFLNILTKI---SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSA 121 (239)
T ss_dssp CHHHHHHHHHHHHH---HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CHHHHHHHHHHHHh---hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCH
Confidence 33444455555533 36789999999999999999987 3 4599999999999998887765443 3489999998
Q ss_pred CCC-C--------------CCC--CCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 126 TSM-Q--------------FMD--ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 126 ~~l-~--------------~~~--~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
.+. + |++ ++||+|++...... ...+++++.++|+|||++++.+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~----------~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 122 LETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKEN----------YPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp HHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGG----------HHHHHHHHHHHEEEEEEEEEECS
T ss_pred HHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHH----------HHHHHHHHHHHcCCCeEEEEEcc
Confidence 652 2 222 78999998644322 45889999999999999998764
No 239
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.97 E-value=7e-10 Score=121.02 Aligned_cols=99 Identities=15% Similarity=0.156 Sum_probs=83.1
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEecccccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~ 146 (771)
+..+|||||||+|.++..+++. +..+++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|++..++|+
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~-~~p--~~D~v~~~~~lh~ 258 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG-----SNNLTYVGGDMFT-SIP--NADAVLLKYILHN 258 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----BTTEEEEECCTTT-CCC--CCSEEEEESCGGG
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc-----CCCcEEEeccccC-CCC--CccEEEeehhhcc
Confidence 5689999999999999999987 3348999999 988875532 2569999999977 555 3999999999999
Q ss_pred ccCcccchHHHHHHHHHHHHcccc---CeEEEEEEcC
Q 004164 147 LMEPELGHKLGNQYLSEVKRLLKS---GGKFVCLTLA 180 (771)
Q Consensus 147 l~~~~~~~~~~~~~l~~i~rvLkp---GG~~ii~~~~ 180 (771)
+.+.+ ..+++++++++||| ||++++.+..
T Consensus 259 ~~d~~-----~~~~l~~~~~~L~p~~~gG~l~i~e~~ 290 (352)
T 1fp2_A 259 WTDKD-----CLRILKKCKEAVTNDGKRGKVTIIDMV 290 (352)
T ss_dssp SCHHH-----HHHHHHHHHHHHSGGGCCCEEEEEECE
T ss_pred CCHHH-----HHHHHHHHHHhCCCCCCCcEEEEEEee
Confidence 86543 56999999999999 9999999865
No 240
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.96 E-value=1e-09 Score=113.86 Aligned_cols=101 Identities=15% Similarity=0.047 Sum_probs=81.3
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC-C-C-----CCCCcc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM-Q-F-----MDETFD 136 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l-~-~-----~~~sFD 136 (771)
++.+|||||||+|..+..+++. + ..+|+++|+++.+++.+++.....+ .+++++++|+.+. + + ++++||
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 5679999999999999999986 2 3599999999999998887765544 4699999998764 3 2 257899
Q ss_pred EEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 137 VILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 137 lVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
+|++..... . ...+++++.++|+|||++++..
T Consensus 159 ~V~~d~~~~-----~-----~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 159 FIFVDADKD-----N-----YLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EEEECSCST-----T-----HHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEcCchH-----H-----HHHHHHHHHHhCCCCeEEEEec
Confidence 999754311 1 5689999999999999998765
No 241
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.95 E-value=4.2e-09 Score=110.01 Aligned_cols=159 Identities=14% Similarity=0.137 Sum_probs=106.3
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC---C-CCCCeeEEEcchHHHHHhhccCCcccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF---T-QDKSLKVHITDGIKFVREMKSSSATDE 615 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~---~-~~~r~~v~i~Dg~~~l~~~~~~~~~~~ 615 (771)
....+||+||+|+|.++..|....|..+|++||+++.+++.|++.+.. . ..++++++.+|..++.......
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~----- 109 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEA----- 109 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHT-----
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhh-----
Confidence 345689999999999999999999888999999999999999999753 2 2457999999998875432100
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeC-CCCCCCCCCCcCCc---------CcccHHHHHHHHHccCCCcEE
Q 004164 616 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDV-DSPDSSSGMTCPAA---------DFVEGSFLLTVKDALSEQGLF 685 (771)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~-~s~d~~~g~s~pp~---------~f~~~~fl~~~~~~L~~~Gil 685 (771)
.....+||+|+++. +.... +..+|.. ...-..+++.+.++|+|||.|
T Consensus 110 ---------------------~~~~~~fD~Vv~nPPy~~~~--~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l 166 (260)
T 2ozv_A 110 ---------------------GLPDEHFHHVIMNPPYNDAG--DRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQL 166 (260)
T ss_dssp ---------------------TCCTTCEEEEEECCCC-----------------------CCHHHHHHHHHHHEEEEEEE
T ss_pred ---------------------ccCCCCcCEEEECCCCcCCC--CCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEE
Confidence 01135799999962 11100 1111110 112468999999999999999
Q ss_pred EEEeccCChhHHHHHHHHHHHhccceEEeee----cCCccEEEEEecC
Q 004164 686 IVNLVSRSQATKDMVISRMKMVFNHLFCLQL----EEDVNLVLFGLSS 729 (771)
Q Consensus 686 v~Nl~~~~~~~~~~v~~~l~~vF~~v~~~~~----~~~~N~Vl~a~~~ 729 (771)
++-. +.. ....++..+++.|..+....+ ....+.|++....
T Consensus 167 ~~~~--~~~-~~~~~~~~l~~~~~~~~i~~v~~~~~~~~~~~lv~~~k 211 (260)
T 2ozv_A 167 SLIS--RPQ-SVAEIIAACGSRFGGLEITLIHPRPGEDAVRMLVTAIK 211 (260)
T ss_dssp EEEE--CGG-GHHHHHHHHTTTEEEEEEEEEESSTTSCCCEEEEEEEE
T ss_pred EEEE--cHH-HHHHHHHHHHhcCCceEEEEEcCCCCCCceEEEEEEEe
Confidence 9854 222 344577777776764433322 3456777776543
No 242
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.95 E-value=3.3e-09 Score=116.77 Aligned_cols=126 Identities=13% Similarity=0.178 Sum_probs=93.7
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCC-CeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC
Q 004164 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM 128 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~-~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l 128 (771)
.+...+..+. . .++.+|||+|||+|.++..++..+. .+|+|+|+|+.+++.+++++...+ .++++.++|+.++
T Consensus 205 ~la~~l~~~~-~---~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~ 280 (373)
T 3tm4_A 205 SIANAMIELA-E---LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQL 280 (373)
T ss_dssp HHHHHHHHHH-T---CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGG
T ss_pred HHHHHHHHhh-c---CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 4444555555 3 5788999999999999999998864 489999999999999988776555 4799999999999
Q ss_pred CCCCCCccEEEeccccccccCcc-cchHHHHHHHHHHHHccccCeEEEEEEcCcch
Q 004164 129 QFMDETFDVILDKGGLDALMEPE-LGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (771)
Q Consensus 129 ~~~~~sFDlVi~~~~l~~l~~~~-~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~ 183 (771)
++++++||+|+++..+....... .-......+++++.++| ||.+++++.....
T Consensus 281 ~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~~~~ 334 (373)
T 3tm4_A 281 SQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTEKKA 334 (373)
T ss_dssp GGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESCHHH
T ss_pred CcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECCHHH
Confidence 88889999999976654432211 11223578899999999 6666666654333
No 243
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.94 E-value=9.2e-09 Score=104.98 Aligned_cols=102 Identities=17% Similarity=0.137 Sum_probs=85.7
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEeccccccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDAL 147 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l 147 (771)
+..+|||||||.|.++..+. +...|+++|+++.+++.+++.....+.+..+.++|....+.+ ++||+|+..-+++++
T Consensus 105 ~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~-~~~DvvLllk~lh~L 181 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPA-EAGDLALIFKLLPLL 181 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCC-CBCSEEEEESCHHHH
T ss_pred CCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCC-CCcchHHHHHHHHHh
Confidence 57899999999999999887 556999999999999988887766678899999999988765 589999999888888
Q ss_pred cCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 148 MEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 148 ~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
.+.+.+ ..+ ++...|+++|.+|-..
T Consensus 182 E~q~~~-----~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 182 EREQAG-----SAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HHHSTT-----HHH-HHHHHCBCSEEEEEEE
T ss_pred hhhchh-----hHH-HHHHHhcCCCEEEEcC
Confidence 655432 444 7888999999888765
No 244
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.94 E-value=1.4e-09 Score=117.92 Aligned_cols=108 Identities=14% Similarity=0.225 Sum_probs=82.6
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhc-----CCCCcEEEEeecCCC--CCCCCCccEEE
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSM--QFMDETFDVIL 139 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~-----~~~~i~~~~~D~~~l--~~~~~sFDlVi 139 (771)
...+|||||||+|.++..+++. +..+|+++|+|+.+++.+++.+.. ..++++++++|+.+. .+++++||+|+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi 199 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVI 199 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEE
Confidence 4679999999999999999987 346999999999999988776543 246899999998764 23467899999
Q ss_pred eccccccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 140 DKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 140 ~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
+........ .. . .....++++++++|+|||++++..
T Consensus 200 ~d~~~p~~~-~~-~-l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 200 VDSSDPIGP-AK-E-LFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp ECCCCTTSG-GG-G-GGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred ECCCCccCc-ch-h-hhHHHHHHHHHHhcCCCcEEEEec
Confidence 854321111 01 0 003589999999999999999863
No 245
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.94 E-value=6.5e-09 Score=113.56 Aligned_cols=106 Identities=15% Similarity=0.115 Sum_probs=87.5
Q ss_pred CCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCCCCccEEEecccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMDETFDVILDKGGL 144 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~~sFDlVi~~~~l 144 (771)
.+..+|||||||+|.++..+++. +..+++..|. |.+++.+++...... ++++++.+|+.+.+.+ .+|+|+...+|
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vl 254 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARVL 254 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESSG
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeeec
Confidence 45679999999999999999987 3347888897 778888876654332 6899999999876544 57999999999
Q ss_pred ccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 145 DALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 145 ~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
|.+.+++ ..++|+++++.|+|||++++++..
T Consensus 255 h~~~d~~-----~~~iL~~~~~al~pgg~lli~e~~ 285 (353)
T 4a6d_A 255 HDWADGK-----CSHLLERIYHTCKPGGGILVIESL 285 (353)
T ss_dssp GGSCHHH-----HHHHHHHHHHHCCTTCEEEEEECC
T ss_pred ccCCHHH-----HHHHHHHHHhhCCCCCEEEEEEee
Confidence 9987655 678999999999999999999864
No 246
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.93 E-value=1.9e-09 Score=115.31 Aligned_cols=109 Identities=17% Similarity=0.234 Sum_probs=81.9
Q ss_pred CCCeEEEEcCCcchhHHHHHhcC-CCeEEEEcCCHHHHHHHHHHhhc-----CCCCcEEEEeecCCC-CCCCCCccEEEe
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSM-QFMDETFDVILD 140 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g-~~~V~~vDiS~~~i~~~~~~~~~-----~~~~i~~~~~D~~~l-~~~~~sFDlVi~ 140 (771)
.+.+|||||||+|.++..+++.+ ..+|+++|+++.+++.+++.+.. ..++++++.+|+.+. +..+++||+|++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 56899999999999999999873 46999999999999988776533 247899999998763 444688999998
Q ss_pred ccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 141 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 141 ~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
........... .....++++++++|+|||++++...
T Consensus 175 d~~~~~~~~~~---l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 175 DSSDPMGPAES---LFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp ECC--------------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCCcchh---hhHHHHHHHHHhccCCCeEEEEecC
Confidence 54432211100 0124789999999999999998763
No 247
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.93 E-value=1.8e-09 Score=113.89 Aligned_cols=110 Identities=21% Similarity=0.224 Sum_probs=83.8
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhc-----CCCCcEEEEeecCCC-CCCCCCccEEEe
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSM-QFMDETFDVILD 140 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~-----~~~~i~~~~~D~~~l-~~~~~sFDlVi~ 140 (771)
.+.+|||||||+|.++..+++. +..+|+++|+++.+++.+++.+.. ..++++++.+|+.+. +..+++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 4689999999999999999988 567999999999999988765522 246899999998763 334578999998
Q ss_pred ccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 141 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 141 ~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
............ ....++++++++|+|||++++...+
T Consensus 155 d~~~~~~~~~~l---~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 155 DSTEPVGPAVNL---FTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp SCSSCCSCCCCC---STTHHHHHHHHHEEEEEEEEEECCC
T ss_pred CCCCCCCcchhh---hHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 654322111000 0147899999999999999987543
No 248
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.93 E-value=2.5e-09 Score=114.92 Aligned_cols=111 Identities=17% Similarity=0.172 Sum_probs=84.8
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhc------CCCCcEEEEeecCCC-CCCCCCccEEE
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR------DRSDMRWRVMDMTSM-QFMDETFDVIL 139 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~------~~~~i~~~~~D~~~l-~~~~~sFDlVi 139 (771)
.+.+|||||||+|.++..+++. +..+|+++|+++.+++.+++.+.. ..++++++++|+.+. +..+++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 4579999999999999999987 456999999999999988776532 146899999999873 44468899999
Q ss_pred ecccccc-ccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 140 DKGGLDA-LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 140 ~~~~l~~-l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
+....+. ...+. .......++++++++|+|||++++...
T Consensus 157 ~d~~~~~~~~~~~-~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 157 IDLTDPVGEDNPA-RLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EECCCCBSTTCGG-GGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECCCCcccccCcc-hhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 8765443 00110 000035899999999999999998753
No 249
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.93 E-value=2.4e-09 Score=114.55 Aligned_cols=108 Identities=18% Similarity=0.143 Sum_probs=83.2
Q ss_pred CeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcC-CCCcEEEEeecCCC--CCCCCCccEEEeccccc
Q 004164 70 PQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSM--QFMDETFDVILDKGGLD 145 (771)
Q Consensus 70 ~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~-~~~i~~~~~D~~~l--~~~~~sFDlVi~~~~l~ 145 (771)
.+|||||||+|.++..+++. +..+|++||+++.+++.+++.+... .++++++++|+.++ .+++++||+|++.....
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 49999999999999999984 3348999999999999887776432 46899999999875 34568999999864333
Q ss_pred cccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 146 ~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
....... .-..++++++++|+|||+|++....
T Consensus 171 ~~~~~~L---~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 171 AITPQNF---TTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp SCCCGGG---SBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cccchhh---hHHHHHHHHHHhcCCCcEEEEEecC
Confidence 2111110 0258999999999999999987754
No 250
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.92 E-value=1.3e-09 Score=115.35 Aligned_cols=107 Identities=16% Similarity=0.212 Sum_probs=81.7
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhc------------CCCCcEEEEeecCCC-CCCCCC
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR------------DRSDMRWRVMDMTSM-QFMDET 134 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~------------~~~~i~~~~~D~~~l-~~~~~s 134 (771)
.+.+|||||||+|.++..+++.+..+|+++|+++.+++.+++.+ . ..++++++.+|+.+. +. +++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 46799999999999999999886679999999999999887765 2 246799999998663 23 578
Q ss_pred ccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 135 FDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 135 FDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
||+|++...... ..... -....++++++++|+|||++++...
T Consensus 153 fD~Ii~d~~~~~-~~~~~--l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 153 FDVIIADSTDPV-GPAKV--LFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp EEEEEEECCCCC--------TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeEEEECCCCCC-Ccchh--hhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 999998554321 11110 0025789999999999999998753
No 251
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.92 E-value=2.2e-09 Score=108.93 Aligned_cols=112 Identities=9% Similarity=0.154 Sum_probs=85.5
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
.+.+||+||+|+|.++.++...++ ..+|++||++|.+++.|++++ |+ +++++++.+|+.+++.....
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~l~~~~~------- 128 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL--QDKVTILNGASQDLIPQLKK------- 128 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESCHHHHGGGTTT-------
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC--CCceEEEECCHHHHHHHHHH-------
Confidence 467999999999999999998765 679999999999999999987 44 46899999999998766431
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
......||+|++|..... ..-..++++.+ +.|+|||+|++.-+..
T Consensus 129 --------------------~~~~~~fD~V~~d~~~~~----------~~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 129 --------------------KYDVDTLDMVFLDHWKDR----------YLPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp --------------------TSCCCCCSEEEECSCGGG----------HHHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred --------------------hcCCCceEEEEEcCCccc----------chHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 001257999999752221 01123567777 9999999999865443
No 252
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.92 E-value=3.6e-09 Score=112.13 Aligned_cols=90 Identities=14% Similarity=0.249 Sum_probs=72.7
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC
Q 004164 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM 128 (771)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l 128 (771)
+.+...+.+.+.. .++.+|||+|||+|.++..|++.+. +|+++|+++.+++.++++....+ ++++++++|+.++
T Consensus 14 ~~i~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 14 PLIINSIIDKAAL---RPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT 89 (285)
T ss_dssp HHHHHHHHHHTCC---CTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS
T ss_pred HHHHHHHHHhcCC---CCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc
Confidence 4455566666654 5788999999999999999999876 99999999999998887764433 4799999999988
Q ss_pred CCCCCCccEEEecccccc
Q 004164 129 QFMDETFDVILDKGGLDA 146 (771)
Q Consensus 129 ~~~~~sFDlVi~~~~l~~ 146 (771)
+++ +||+|+++...++
T Consensus 90 ~~~--~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 90 DLP--FFDTCVANLPYQI 105 (285)
T ss_dssp CCC--CCSEEEEECCGGG
T ss_pred cch--hhcEEEEecCccc
Confidence 765 7999999755544
No 253
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.92 E-value=2.7e-09 Score=113.05 Aligned_cols=108 Identities=18% Similarity=0.198 Sum_probs=83.5
Q ss_pred CCCeEEEEcCCcchhHHHHHhcC-CCeEEEEcCCHHHHHHHHHHhhcC-----CCCcEEEEeecCCC-CCCCCCccEEEe
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRD-----RSDMRWRVMDMTSM-QFMDETFDVILD 140 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g-~~~V~~vDiS~~~i~~~~~~~~~~-----~~~i~~~~~D~~~l-~~~~~sFDlVi~ 140 (771)
++.+|||||||+|.++..+++.. ..+|+++|+++.+++.+++.+... .++++++.+|+.+. +..+++||+|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 56899999999999999999873 469999999999999887765432 46899999998764 323678999998
Q ss_pred ccccccccCcccchHH-HHHHHHHHHHccccCeEEEEEEc
Q 004164 141 KGGLDALMEPELGHKL-GNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 141 ~~~l~~l~~~~~~~~~-~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
..+........ . -..++++++++|+|||++++...
T Consensus 158 d~~~~~~~~~~----l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 158 DSSDPIGPAET----LFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp ECCCTTTGGGG----GSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred cCCCCCCcchh----hhHHHHHHHHHHhcCCCcEEEEECC
Confidence 54432211111 1 15899999999999999998754
No 254
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.92 E-value=2.2e-09 Score=110.13 Aligned_cols=103 Identities=15% Similarity=0.044 Sum_probs=81.0
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC----CCCC--CCccE
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM----QFMD--ETFDV 137 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l----~~~~--~sFDl 137 (771)
++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.+++.....+ .+++++++|+.+. +..+ ++||+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 5679999999999999999986 2 3599999999999998877654433 4689999997542 2333 78999
Q ss_pred EEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 138 ILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 138 Vi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
|++..... . ...+++++.++|+|||++++.+..
T Consensus 152 V~~d~~~~-----~-----~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 152 IFIDADKR-----N-----YPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp EEECSCGG-----G-----HHHHHHHHHHTEEEEEEEEEECTT
T ss_pred EEECCCHH-----H-----HHHHHHHHHHHcCCCeEEEEeCCC
Confidence 99754321 1 568999999999999999987643
No 255
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.91 E-value=2.4e-09 Score=115.03 Aligned_cols=107 Identities=17% Similarity=0.219 Sum_probs=79.9
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcC-----CCCcEEEEeecCCC-CCCCCCccEEEe
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD-----RSDMRWRVMDMTSM-QFMDETFDVILD 140 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~-----~~~i~~~~~D~~~l-~~~~~sFDlVi~ 140 (771)
...+|||||||+|.++..+++. +..+|+++|+++.+++.+++.+... .++++++.+|+.+. +..+++||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 4579999999999999999987 4569999999999999887766432 46899999998763 334678999998
Q ss_pred ccccccccCcccchHHH-HHHHHHHHHccccCeEEEEEE
Q 004164 141 KGGLDALMEPELGHKLG-NQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 141 ~~~l~~l~~~~~~~~~~-~~~l~~i~rvLkpGG~~ii~~ 178 (771)
.... .+.... ... ..++++++++|+|||++++..
T Consensus 188 d~~~-~~~~~~---~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DSSD-PVGPAE---SLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CCC-----------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCCC-CCCcch---hhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 5532 221111 112 689999999999999999875
No 256
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.90 E-value=2.3e-09 Score=108.99 Aligned_cols=115 Identities=15% Similarity=0.105 Sum_probs=86.4
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCC
Q 004164 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~ 127 (771)
.....+..++.. .++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.+++.....+ .+++++++|+.+
T Consensus 56 ~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 132 (229)
T 2avd_A 56 EQAQLLANLARL---IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALE 132 (229)
T ss_dssp HHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred HHHHHHHHHHHh---cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHH
Confidence 333444444432 35689999999999999999986 2 4599999999999998887765444 579999999865
Q ss_pred C--CCCC----CCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 128 M--QFMD----ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 128 l--~~~~----~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
. .+.+ ++||+|++..... . ...+++++.++|+|||++++.+.
T Consensus 133 ~~~~~~~~~~~~~~D~v~~d~~~~-----~-----~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 133 TLDELLAAGEAGTFDVAVVDADKE-----N-----CSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp HHHHHHHTTCTTCEEEEEECSCST-----T-----HHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHHHHHhcCCCCCccEEEECCCHH-----H-----HHHHHHHHHHHcCCCeEEEEECC
Confidence 4 1211 6899999754311 1 56899999999999999998654
No 257
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.90 E-value=4.1e-09 Score=116.49 Aligned_cols=131 Identities=19% Similarity=0.097 Sum_probs=93.3
Q ss_pred cccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC-C--CcEEEE
Q 004164 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-S--DMRWRV 122 (771)
Q Consensus 46 w~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~-~--~i~~~~ 122 (771)
+|......+..+..++ .++.+|||+|||+|.++..++..|..+|+++|+|+.+++.+++.+...+ . +++|++
T Consensus 195 ff~~~~~~~~~~~~~~-----~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~ 269 (385)
T 2b78_A 195 IFLDQRQVRNELINGS-----AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVV 269 (385)
T ss_dssp SCGGGHHHHHHHHHTT-----TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEE
T ss_pred cCCcHHHHHHHHHHHh-----cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEE
Confidence 4433334444555553 2578999999999999999998877799999999999998877765544 2 799999
Q ss_pred eecCCC-C-C--CCCCccEEEecccccccc--CcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 123 MDMTSM-Q-F--MDETFDVILDKGGLDALM--EPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 123 ~D~~~l-~-~--~~~sFDlVi~~~~l~~l~--~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
+|+.+. + . ...+||+|++........ ........+..++..+.++|+|||++++.+...
T Consensus 270 ~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 270 MDVFDYFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp SCHHHHHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCHHHHHHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 999763 2 1 245899999754332110 011111235678889999999999999888653
No 258
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.90 E-value=5.1e-09 Score=110.29 Aligned_cols=118 Identities=12% Similarity=0.069 Sum_probs=92.4
Q ss_pred cccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEe
Q 004164 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVM 123 (771)
Q Consensus 46 w~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~ 123 (771)
|+.....-+..+.+++. ++.+|||+|||+|.++..++..|..+|+++|+++.+++.+++.....+ .+++++++
T Consensus 108 f~~~~~~er~ri~~~~~-----~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~ 182 (278)
T 3k6r_A 108 FSPANVKERVRMAKVAK-----PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM 182 (278)
T ss_dssp CCGGGHHHHHHHHHHCC-----TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred EcCCcHHHHHHHHHhcC-----CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeC
Confidence 55555555566777764 689999999999999999999887799999999999998876655444 46899999
Q ss_pred ecCCCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 124 DMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 124 D~~~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
|+.+++. .+.||.|++...... ..++..+.++||+||.+.+.++.
T Consensus 183 D~~~~~~-~~~~D~Vi~~~p~~~-----------~~~l~~a~~~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 183 DNRDFPG-ENIADRILMGYVVRT-----------HEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp CTTTCCC-CSCEEEEEECCCSSG-----------GGGHHHHHHHEEEEEEEEEEEEE
T ss_pred cHHHhcc-ccCCCEEEECCCCcH-----------HHHHHHHHHHcCCCCEEEEEeee
Confidence 9998763 578999986533221 25678888999999998876654
No 259
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.90 E-value=5e-09 Score=115.94 Aligned_cols=130 Identities=13% Similarity=0.029 Sum_probs=91.6
Q ss_pred cccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeec
Q 004164 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDM 125 (771)
Q Consensus 46 w~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~ 125 (771)
+|......+..+..++ .++.+|||+|||+|.++..++..|. .|+++|+|+.+++.+++.+...+....+.++|+
T Consensus 197 ~f~dqr~~r~~l~~~~-----~~g~~VLDlg~GtG~~sl~~a~~ga-~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~ 270 (393)
T 4dmg_A 197 YYLDQRENRRLFEAMV-----RPGERVLDVYSYVGGFALRAARKGA-YALAVDKDLEALGVLDQAALRLGLRVDIRHGEA 270 (393)
T ss_dssp SCGGGHHHHHHHHTTC-----CTTCEEEEESCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCH
T ss_pred cCCCHHHHHHHHHHHh-----cCCCeEEEcccchhHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccH
Confidence 4444444444444443 2588999999999999999999887 599999999999988877655554456779998
Q ss_pred CCCC-CCCCCccEEEeccccccccCcc--cchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 126 TSMQ-FMDETFDVILDKGGLDALMEPE--LGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 126 ~~l~-~~~~sFDlVi~~~~l~~l~~~~--~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
.+.. ...+.||+|++......-.... ........++..+.++|+|||++++.+.+.
T Consensus 271 ~~~l~~~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 271 LPTLRGLEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp HHHHHTCCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred HHHHHHhcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 7752 2134499999764332111000 001235688999999999999999888763
No 260
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.90 E-value=3.1e-09 Score=108.59 Aligned_cols=104 Identities=16% Similarity=0.272 Sum_probs=86.7
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
.+.+||+||+|.|.++..+...+|..+|++||+++.+++.|++.+ |+ .++++++.+|+.+++....
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~--------- 122 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGL--ESRIELLFGDALQLGEKLE--------- 122 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTC--TTTEEEECSCGGGSHHHHT---------
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECCHHHHHHhcc---------
Confidence 456899999999999999999998889999999999999999987 43 4679999999988766542
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEe
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 689 (771)
....||+|++|.... ....+|+.+.+.|+|||++++.-
T Consensus 123 ---------------------~~~~fD~I~~~~~~~-------------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 123 ---------------------LYPLFDVLFIDAAKG-------------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp ---------------------TSCCEEEEEEEGGGS-------------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred ---------------------cCCCccEEEECCCHH-------------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 015699999975422 23789999999999999999863
No 261
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.89 E-value=3.1e-09 Score=109.44 Aligned_cols=102 Identities=13% Similarity=0.039 Sum_probs=81.3
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCC-C-C-----CCCCcc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM-Q-F-----MDETFD 136 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l-~-~-----~~~sFD 136 (771)
+..+|||||||+|..+..+++. + ..+|+++|+++.+++.+++.....+ .+++++++|+.+. + + ++++||
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 5679999999999999999986 3 3699999999999998887765544 3699999998764 2 2 257899
Q ss_pred EEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 137 VILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 137 lVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
+|+...... ....+++++.++|+|||++++.+.
T Consensus 150 ~I~~d~~~~----------~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 150 FGFVDADKP----------NYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp EEEECSCGG----------GHHHHHHHHHHHEEEEEEEEEECT
T ss_pred EEEECCchH----------HHHHHHHHHHHhcCCCeEEEEecC
Confidence 999753211 156899999999999999987653
No 262
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.89 E-value=4.1e-09 Score=113.64 Aligned_cols=109 Identities=18% Similarity=0.243 Sum_probs=83.4
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhc-----CCCCcEEEEeecCCC-CCCCCCccEEEe
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSM-QFMDETFDVILD 140 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~-----~~~~i~~~~~D~~~l-~~~~~sFDlVi~ 140 (771)
++.+|||||||+|.++..+++. +..+|+++|+|+.+++.+++.+.. ..++++++++|+.+. +..+++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 4579999999999999999987 456999999999999988776543 146899999998763 334578999998
Q ss_pred ccccccccCcccchHHH-HHHHHHHHHccccCeEEEEEEcC
Q 004164 141 KGGLDALMEPELGHKLG-NQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 141 ~~~l~~l~~~~~~~~~~-~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
...- ...... ... ..++++++++|+|||++++...+
T Consensus 196 d~~~-p~~~~~---~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 196 DSSD-PIGPAE---TLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp ECCC-SSSGGG---GGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCcC-CCCcch---hhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 5431 111111 111 58999999999999999997643
No 263
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.89 E-value=6.9e-09 Score=117.07 Aligned_cols=122 Identities=18% Similarity=0.180 Sum_probs=91.1
Q ss_pred HHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc--CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCC--C
Q 004164 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ--F 130 (771)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~--g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~--~ 130 (771)
.+...+.. .++.+|||+|||+|..+..++.. +.++|+++|+|+.+++.++++....+ .++.++++|+.+++ +
T Consensus 250 l~~~~l~~---~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~ 326 (450)
T 2yxl_A 250 VASIVLDP---KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEII 326 (450)
T ss_dssp HHHHHHCC---CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSS
T ss_pred HHHHhcCC---CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhh
Confidence 34445543 57889999999999999999986 32689999999999998877765544 47999999998876 5
Q ss_pred CCCCccEEEe------ccccccccCc------ccch---HHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 131 MDETFDVILD------KGGLDALMEP------ELGH---KLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 131 ~~~sFDlVi~------~~~l~~l~~~------~~~~---~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
++++||+|++ .+++...++. ++-. .....++.++.++|||||++++++.+
T Consensus 327 ~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 327 GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 5578999996 2333322211 1000 01268899999999999999998876
No 264
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.89 E-value=4.6e-09 Score=111.94 Aligned_cols=111 Identities=14% Similarity=0.172 Sum_probs=81.7
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhc-----CCCCcEEEEeecCCC-CCCCCCccEEEe
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSM-QFMDETFDVILD 140 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~-----~~~~i~~~~~D~~~l-~~~~~sFDlVi~ 140 (771)
.+.+|||||||+|.++..+++. +..+|+++|+++.+++.+++.+.. ..++++++++|+.+. +..+++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 4589999999999999999987 557999999999999988776532 246899999998763 444678999997
Q ss_pred ccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 141 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 141 ~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
...-.+...... .....++++++++|+|||++++...+
T Consensus 170 d~~~~~~~~~~~--l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 170 DSTDPTAGQGGH--LFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EC------------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred cCCCcccCchhh--hhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 533221111000 00258899999999999999987543
No 265
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.89 E-value=2.1e-09 Score=111.46 Aligned_cols=126 Identities=10% Similarity=0.052 Sum_probs=81.1
Q ss_pred HHHHHHHHhhCCCCC--CCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecC
Q 004164 52 QLRDPLISLIGAPTS--SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMT 126 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~--~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~ 126 (771)
.....+...+..... .++.+|||+|||+|.++..++.. +..+|+++|+|+.+++.++++....+ .+++++++|+.
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 126 (254)
T 2h00_A 47 NYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQK 126 (254)
T ss_dssp HHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchh
Confidence 344445555543211 25679999999999999988876 23499999999999998887765544 34999999987
Q ss_pred CC---CCC---CCCccEEEeccccccccCc-cc-----c--hHHHHHHHHHHHHccccCeEEEEE
Q 004164 127 SM---QFM---DETFDVILDKGGLDALMEP-EL-----G--HKLGNQYLSEVKRLLKSGGKFVCL 177 (771)
Q Consensus 127 ~l---~~~---~~sFDlVi~~~~l~~l~~~-~~-----~--~~~~~~~l~~i~rvLkpGG~~ii~ 177 (771)
+. +++ +++||+|+++..++..... .. . ......++.+++++|||||.+.++
T Consensus 127 ~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 127 TLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp CSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred hhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 62 344 2689999998665543200 00 0 001235677888999998887655
No 266
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.88 E-value=1.3e-09 Score=116.54 Aligned_cols=108 Identities=17% Similarity=0.132 Sum_probs=75.6
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcC----CHHHHHHHHHHhhcC-CCCcEEEEe-ecCCCCCCCCCccEEEe
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDF----SKVVISDMLRRNVRD-RSDMRWRVM-DMTSMQFMDETFDVILD 140 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDi----S~~~i~~~~~~~~~~-~~~i~~~~~-D~~~l~~~~~sFDlVi~ 140 (771)
.++.+|||+|||+|.++..+++. ++|+++|+ ++.+++.+ ..... .+++.++++ |+..++ .++||+|++
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~s 154 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFFIP--PERCDTLLC 154 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTTSC--CCCCSEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHH--HhhhcCCCCeEEEeccccccCC--cCCCCEEEE
Confidence 56789999999999999999988 47999999 55433211 01111 156889988 888765 568999999
Q ss_pred ccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 141 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 141 ~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
..+++ ......+......+|..+.++|||||.|++..+..
T Consensus 155 d~~~~-~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 155 DIGES-SPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CCccc-cCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 77654 11111000001157899999999999999977654
No 267
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.88 E-value=9.8e-09 Score=103.55 Aligned_cols=132 Identities=16% Similarity=0.183 Sum_probs=93.7
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||+||+|+|.++..+....|..++++||+++.+++.|++......-++++++.+|+.++.....
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~------------ 108 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFE------------ 108 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSC------------
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcC------------
Confidence 45689999999999999999999989999999999999999988621111579999999976321111
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHHHHH
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMV 700 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~v 700 (771)
...||+|+++.. ++.....-.+..+....+++.+.+.|+|||.|++.. ........+
T Consensus 109 -------------------~~~~D~i~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~--~~~~~~~~~ 165 (214)
T 1yzh_A 109 -------------------DGEIDRLYLNFS--DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT--DNRGLFEYS 165 (214)
T ss_dssp -------------------TTCCSEEEEESC--CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE--SCHHHHHHH
T ss_pred -------------------CCCCCEEEEECC--CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe--CCHHHHHHH
Confidence 256999999642 211000001122456899999999999999999864 334444555
Q ss_pred HHHHHHh
Q 004164 701 ISRMKMV 707 (771)
Q Consensus 701 ~~~l~~v 707 (771)
++.+.+.
T Consensus 166 ~~~~~~~ 172 (214)
T 1yzh_A 166 LVSFSQY 172 (214)
T ss_dssp HHHHHHH
T ss_pred HHHHHHC
Confidence 5555543
No 268
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.88 E-value=1.3e-08 Score=102.91 Aligned_cols=132 Identities=11% Similarity=0.130 Sum_probs=94.5
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||+||+|+|.++..|...+|..++++||+++.+++.|++...-..-++++++.+|+.++.....
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~------------ 105 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFE------------ 105 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCC------------
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcC------------
Confidence 45689999999999999999999999999999999999999987621112469999999988432222
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHHHHH
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMV 700 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~v 700 (771)
...||.|++....+.... .-....+....+++.+.+.|+|||.|++-. ........+
T Consensus 106 -------------------~~~~d~v~~~~~~p~~~~--~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t--d~~~~~~~~ 162 (213)
T 2fca_A 106 -------------------PGEVKRVYLNFSDPWPKK--RHEKRRLTYSHFLKKYEEVMGKGGSIHFKT--DNRGLFEYS 162 (213)
T ss_dssp -------------------TTSCCEEEEESCCCCCSG--GGGGGSTTSHHHHHHHHHHHTTSCEEEEEE--SCHHHHHHH
T ss_pred -------------------cCCcCEEEEECCCCCcCc--cccccccCcHHHHHHHHHHcCCCCEEEEEe--CCHHHHHHH
Confidence 256999988542221100 000123557899999999999999999764 344445555
Q ss_pred HHHHHHh
Q 004164 701 ISRMKMV 707 (771)
Q Consensus 701 ~~~l~~v 707 (771)
+..+.+.
T Consensus 163 ~~~~~~~ 169 (213)
T 2fca_A 163 LKSFSEY 169 (213)
T ss_dssp HHHHHHH
T ss_pred HHHHHHC
Confidence 6666554
No 269
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.88 E-value=6.4e-09 Score=116.62 Aligned_cols=123 Identities=17% Similarity=0.145 Sum_probs=93.0
Q ss_pred HHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCC-CeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC--CC
Q 004164 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ--FM 131 (771)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~-~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~--~~ 131 (771)
..+...+.. .++.+|||+|||+|..+..+++.+. ++|+++|+++.+++.++++....+.++.++++|+.+++ ++
T Consensus 236 ~~~~~~l~~---~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~ 312 (429)
T 1sqg_A 236 QGCMTWLAP---QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCG 312 (429)
T ss_dssp HTHHHHHCC---CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHT
T ss_pred HHHHHHcCC---CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcc
Confidence 344555543 6788999999999999999998743 69999999999999888877666667899999999876 56
Q ss_pred CCCccEEEec------cccccccCc------ccc---hHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 132 DETFDVILDK------GGLDALMEP------ELG---HKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 132 ~~sFDlVi~~------~~l~~l~~~------~~~---~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+++||+|++. +++...++. ++- ......++.++.++|||||++++++.+
T Consensus 313 ~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 313 EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp TCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred cCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 6789999963 233322210 000 011368899999999999999998865
No 270
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.87 E-value=4.5e-09 Score=107.99 Aligned_cols=117 Identities=15% Similarity=0.275 Sum_probs=87.1
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
.+.+||+||+|.|.++..+...+| ..+|++||+++.+++.|++++ |+ +++++++.+|+.+++........
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~~~~~~~~~~~---- 133 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL--ENKIFLKLGSALETLQVLIDSKS---- 133 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHHHHHHHHHHCSS----
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCEEEEECCHHHHHHHHHhhcc----
Confidence 457899999999999999999987 679999999999999999997 44 45799999999998775431000
Q ss_pred ccccccccccCCCCCCCCCCCCCC--CceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEec
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASN--ARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 690 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~--~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 690 (771)
. +........ ..||+|++|.... .-..+|+.+.+.|+|||++++..+
T Consensus 134 -------------~-~~~~~~f~~~~~~fD~I~~~~~~~-------------~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 134 -------------A-PSWASDFAFGPSSIDLFFLDADKE-------------NYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp -------------C-CGGGTTTCCSTTCEEEEEECSCGG-------------GHHHHHHHHHHHEEEEEEEEEECS
T ss_pred -------------c-ccccccccCCCCCcCEEEEeCCHH-------------HHHHHHHHHHHHcCCCeEEEEEcc
Confidence 0 000001112 5799999974211 115889999999999999998653
No 271
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.87 E-value=3.5e-09 Score=117.49 Aligned_cols=114 Identities=18% Similarity=0.104 Sum_probs=87.6
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCC--CcEEEEeecCCCCC----CCCCccEEEec
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSMQF----MDETFDVILDK 141 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~--~i~~~~~D~~~l~~----~~~sFDlVi~~ 141 (771)
++.+|||+|||+|.++..++..|..+|+++|+|+.+++.+++.+...+. +++++++|+.+... ..++||+|++.
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 6789999999999999999998777999999999999988777655442 79999999977531 25789999985
Q ss_pred cccccccCcc--cchHHHHHHHHHHHHccccCeEEEEEEcCc
Q 004164 142 GGLDALMEPE--LGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 181 (771)
Q Consensus 142 ~~l~~l~~~~--~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~ 181 (771)
.......... ........++.++.++|+|||++++++...
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 4332211100 001236788999999999999999988763
No 272
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.86 E-value=8.8e-09 Score=102.91 Aligned_cols=117 Identities=15% Similarity=0.133 Sum_probs=91.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
....+||+||+|+|.++..+....|..+|++||+++.+++.|++.+ |+ ++++++.+|+.+.+..
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~~~---------- 105 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA---RNVTLVEAFAPEGLDD---------- 105 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC---TTEEEEECCTTTTCTT----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC---CcEEEEeCChhhhhhc----------
Confidence 3457899999999999999999998889999999999999999886 43 5799999998764322
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhH
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQAT 696 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~ 696 (771)
...||+|+++.... .-..+++.+.+.|+|||.+++..... ..
T Consensus 106 -----------------------~~~~D~i~~~~~~~-------------~~~~~l~~~~~~LkpgG~l~~~~~~~--~~ 147 (204)
T 3e05_A 106 -----------------------LPDPDRVFIGGSGG-------------MLEEIIDAVDRRLKSEGVIVLNAVTL--DT 147 (204)
T ss_dssp -----------------------SCCCSEEEESCCTT-------------CHHHHHHHHHHHCCTTCEEEEEECBH--HH
T ss_pred -----------------------CCCCCEEEECCCCc-------------CHHHHHHHHHHhcCCCeEEEEEeccc--cc
Confidence 14699999854221 23689999999999999999976543 23
Q ss_pred HHHHHHHHHHh
Q 004164 697 KDMVISRMKMV 707 (771)
Q Consensus 697 ~~~v~~~l~~v 707 (771)
...+...+++.
T Consensus 148 ~~~~~~~l~~~ 158 (204)
T 3e05_A 148 LTKAVEFLEDH 158 (204)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHC
Confidence 34455666555
No 273
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.86 E-value=8e-09 Score=114.61 Aligned_cols=130 Identities=13% Similarity=0.048 Sum_probs=94.2
Q ss_pred ccccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCC---CcEEE
Q 004164 45 EWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS---DMRWR 121 (771)
Q Consensus 45 ew~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~---~i~~~ 121 (771)
.+|.........+..+ .++.+|||+|||+|.++..++..|..+|+++|+|+.+++.+++.+...+- +++++
T Consensus 203 gff~~~~~~~~~l~~~------~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~ 276 (396)
T 3c0k_A 203 GYYLDQRDSRLATRRY------VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFV 276 (396)
T ss_dssp SSCGGGHHHHHHHHHH------CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CcCcCHHHHHHHHHHh------hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEE
Confidence 3454444444444444 25789999999999999999998877999999999999988777655443 78999
Q ss_pred EeecCCCCC----CCCCccEEEeccccccccCc--ccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 122 VMDMTSMQF----MDETFDVILDKGGLDALMEP--ELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 122 ~~D~~~l~~----~~~sFDlVi~~~~l~~l~~~--~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
++|+.+... ..++||+|++.-........ .........++.++.++|+|||++++.+..
T Consensus 277 ~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 277 RDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp ESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECCHHHHHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 999987521 14689999986433211100 000123678999999999999999998865
No 274
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.86 E-value=4.8e-09 Score=109.82 Aligned_cols=96 Identities=14% Similarity=0.200 Sum_probs=78.3
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhc-----CCCCcEEEEeecCCCCCCCCCccEEEecc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSMQFMDETFDVILDKG 142 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~-----~~~~i~~~~~D~~~l~~~~~sFDlVi~~~ 142 (771)
.+.+|||||||+|.++..+++.+ .+|+++|+++.+++.+++.+.. ..++++++.+|+.+.. ++||+|++..
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~ 147 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ 147 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC
Confidence 45799999999999999998887 7999999999999877654422 2468999999998764 7899999752
Q ss_pred ccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 143 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 143 ~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
.++. .++++++++|+|||++++...
T Consensus 148 -----~dp~-------~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 148 -----EPDI-------HRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp -----CCCH-------HHHHHHHTTEEEEEEEEEEEE
T ss_pred -----CChH-------HHHHHHHHhcCCCcEEEEEcC
Confidence 2222 489999999999999998653
No 275
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.86 E-value=4.9e-09 Score=124.37 Aligned_cols=129 Identities=17% Similarity=0.086 Sum_probs=95.7
Q ss_pred cccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC---CCcEEEE
Q 004164 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR---SDMRWRV 122 (771)
Q Consensus 46 w~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~---~~i~~~~ 122 (771)
+|......+..+..+. ++.+|||+|||+|.++..++..|..+|+++|+|+.+++.+++.+...+ .++++++
T Consensus 523 ~f~d~r~~r~~l~~~~------~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~ 596 (703)
T 3v97_A 523 LFLDHRIARRMLGQMS------KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQ 596 (703)
T ss_dssp CCGGGHHHHHHHHHHC------TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEE
T ss_pred CcccHHHHHHHHHHhc------CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEe
Confidence 5555555555555543 578999999999999999998888789999999999998877765544 3699999
Q ss_pred eecCCC-CCCCCCccEEEeccccccccCc----ccchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 123 MDMTSM-QFMDETFDVILDKGGLDALMEP----ELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 123 ~D~~~l-~~~~~sFDlVi~~~~l~~l~~~----~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+|+.+. +...++||+|++......-... .........++..+.++|+|||++++.+..
T Consensus 597 ~D~~~~l~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 597 ADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp SCHHHHHHHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCHHHHHHhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 999873 4456789999975433211100 011223778899999999999999987755
No 276
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.86 E-value=1.2e-08 Score=99.88 Aligned_cols=138 Identities=17% Similarity=0.238 Sum_probs=100.6
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
...+||+||+|.|.++..+... ..++++||+++.+++.|++.+ ++ .+.+++++.+|..+.+.
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~~~~d~~~~~~------------ 116 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNL-DNYDIRVVHSDLYENVK------------ 116 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTC-TTSCEEEEECSTTTTCT------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCC-CccceEEEECchhcccc------------
Confidence 4568999999999999988887 569999999999999999987 33 12269999999876421
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHH
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 697 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~ 697 (771)
..+||+|+++. .-. ...-....+++.+.+.|+|||.+++...... ..
T Consensus 117 ----------------------~~~~D~v~~~~--~~~-------~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--~~ 163 (194)
T 1dus_A 117 ----------------------DRKYNKIITNP--PIR-------AGKEVLHRIIEEGKELLKDNGEIWVVIQTKQ--GA 163 (194)
T ss_dssp ----------------------TSCEEEEEECC--CST-------TCHHHHHHHHHHHHHHEEEEEEEEEEEESTH--HH
T ss_pred ----------------------cCCceEEEECC--Ccc-------cchhHHHHHHHHHHHHcCCCCEEEEEECCCC--Ch
Confidence 25799999842 100 0001236899999999999999999876553 23
Q ss_pred HHHHHHHHHhccceEEeeecCCccEEEEEe
Q 004164 698 DMVISRMKMVFNHLFCLQLEEDVNLVLFGL 727 (771)
Q Consensus 698 ~~v~~~l~~vF~~v~~~~~~~~~N~Vl~a~ 727 (771)
..+...+++.|..+..+... ....+++|.
T Consensus 164 ~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~ 192 (194)
T 1dus_A 164 KSLAKYMKDVFGNVETVTIK-GGYRVLKSK 192 (194)
T ss_dssp HHHHHHHHHHHSCCEEEEEE-TTEEEEEEE
T ss_pred HHHHHHHHHHhcceEEEecC-CcEEEEEEe
Confidence 45778888889877665533 344555554
No 277
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.85 E-value=1.7e-08 Score=97.99 Aligned_cols=124 Identities=11% Similarity=0.046 Sum_probs=90.5
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~-~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
....+||+||+|+|.++..+...+|..+|++||+++.+++.|++.+.-. ..+++ ++.+|+.+.+...
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~----------- 91 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDV----------- 91 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGC-----------
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhcc-----------
Confidence 3456899999999999999999988889999999999999999886221 23478 8889986643331
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHHH
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKD 698 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~ 698 (771)
...||+|+++..- ....+++.+.+.|+|||.+++...... ...
T Consensus 92 ---------------------~~~~D~i~~~~~~--------------~~~~~l~~~~~~L~~gG~l~~~~~~~~--~~~ 134 (178)
T 3hm2_A 92 ---------------------PDNPDVIFIGGGL--------------TAPGVFAAAWKRLPVGGRLVANAVTVE--SEQ 134 (178)
T ss_dssp ---------------------CSCCSEEEECC-T--------------TCTTHHHHHHHTCCTTCEEEEEECSHH--HHH
T ss_pred ---------------------CCCCCEEEECCcc--------------cHHHHHHHHHHhcCCCCEEEEEeeccc--cHH
Confidence 1579999973211 017899999999999999998875442 223
Q ss_pred HHHHHHHHhccceE
Q 004164 699 MVISRMKMVFNHLF 712 (771)
Q Consensus 699 ~v~~~l~~vF~~v~ 712 (771)
.+...+++...++.
T Consensus 135 ~~~~~~~~~~~~~~ 148 (178)
T 3hm2_A 135 MLWALRKQFGGTIS 148 (178)
T ss_dssp HHHHHHHHHCCEEE
T ss_pred HHHHHHHHcCCeeE
Confidence 44555555544333
No 278
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.85 E-value=9.7e-09 Score=105.22 Aligned_cols=108 Identities=11% Similarity=-0.002 Sum_probs=81.8
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||+||+|+|.++..|....+ .+|++||+++.+++.|++.+.- ...+++++.+|+.+.+....
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~-~~~~v~~~~~d~~~~~~~~~------------ 125 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPR-QTHKVIPLKGLWEDVAPTLP------------ 125 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGG-CSSEEEEEESCHHHHGGGSC------------
T ss_pred CCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHh-cCCCeEEEecCHHHhhcccC------------
Confidence 457899999999999999866543 4899999999999999998743 23679999999998754432
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcc-cHHHHHHHHHccCCCcEEEE
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV-EGSFLLTVKDALSEQGLFIV 687 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~-~~~fl~~~~~~L~~~Gilv~ 687 (771)
+..||+|++|.+.. . .+..+.- -..+++.+++.|+|||+|++
T Consensus 126 -------------------~~~fD~V~~d~~~~-~-----~~~~~~~~~~~~l~~~~r~LkpgG~l~~ 168 (236)
T 1zx0_A 126 -------------------DGHFDGILYDTYPL-S-----EETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp -------------------TTCEEEEEECCCCC-B-----GGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred -------------------CCceEEEEECCccc-c-----hhhhhhhhHHHHHHHHHHhcCCCeEEEE
Confidence 36799999974432 1 1111111 13679999999999999985
No 279
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.84 E-value=1.5e-08 Score=99.94 Aligned_cols=109 Identities=12% Similarity=0.045 Sum_probs=84.4
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||++|+|+|.++..+... +..+|++||+|+.+++.|++.+....-++++++.+|+.++.....
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~------------ 110 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGT------------ 110 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCC------------
T ss_pred CCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhcc------------
Confidence 4578999999999998876664 456899999999999999998722111579999999999976543
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCc---ccHHHHHHHHH--ccCCCcEEEEEeccCC
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF---VEGSFLLTVKD--ALSEQGLFIVNLVSRS 693 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f---~~~~fl~~~~~--~L~~~Gilv~Nl~~~~ 693 (771)
..+||+|++|. |-.. .-..+++.+.+ .|+|||++++....+.
T Consensus 111 -------------------~~~fD~i~~~~------------p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 111 -------------------TSPVDLVLADP------------PYNVDSADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp -------------------SSCCSEEEECC------------CTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred -------------------CCCccEEEECC------------CCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 26799999953 1111 23678899988 9999999999875543
No 280
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.84 E-value=1e-08 Score=111.15 Aligned_cols=99 Identities=9% Similarity=0.081 Sum_probs=81.8
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEeccccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGLD 145 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~ 145 (771)
++.+|||+|||+|.++.. +. +..+|+++|+|+.+++.+++.+...+ .+++++++|+.+.. ++||+|++.....
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~~ 269 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPKF 269 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTTT
T ss_pred CCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcHh
Confidence 678999999999999999 77 56699999999999998877765544 47999999998865 7899999753221
Q ss_pred cccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcc
Q 004164 146 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 182 (771)
Q Consensus 146 ~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~ 182 (771)
...++..+.++|+|||.+++.++...
T Consensus 270 -----------~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 270 -----------AHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp -----------GGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred -----------HHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 12678999999999999999887653
No 281
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.84 E-value=8.4e-09 Score=113.53 Aligned_cols=102 Identities=14% Similarity=0.084 Sum_probs=82.0
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCC-CeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCC-CCC-CCCCccEEEeccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTS-MQF-MDETFDVILDKGG 143 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~-~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~-l~~-~~~sFDlVi~~~~ 143 (771)
++.+|||+| |+|.++..++..+. .+|+++|+|+.+++.+++.....+ .+++++++|+.+ ++. .+++||+|++...
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 578999999 99999999988865 699999999999998877765433 379999999998 663 3578999998765
Q ss_pred cccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 144 LDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 144 l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
++... ...++.++.++|+|||++++.+
T Consensus 251 ~~~~~--------~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 251 ETLEA--------IRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp SSHHH--------HHHHHHHHHHTBCSTTCEEEEE
T ss_pred CchHH--------HHHHHHHHHHHcccCCeEEEEE
Confidence 44321 4689999999999999553333
No 282
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.84 E-value=3.6e-09 Score=115.61 Aligned_cols=99 Identities=15% Similarity=0.184 Sum_probs=82.5
Q ss_pred CCCeEEEEcCCcchhHHHHHhcC-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEecccccc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g-~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~ 146 (771)
+..+|||||||+|.++..+++.. ..+++++|+ +.+++.++ ..++++++.+|+.+ +++ +||+|++..++|+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----~~~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~ 263 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLT-----GNENLNFVGGDMFK-SIP--SADAVLLKWVLHD 263 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCC-----CCSSEEEEECCTTT-CCC--CCSEEEEESCGGG
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcc-----cCCCcEEEeCccCC-CCC--CceEEEEcccccC
Confidence 45799999999999999999873 348999999 67775442 23569999999988 665 4999999999999
Q ss_pred ccCcccchHHHHHHHHHHHHcccc---CeEEEEEEcC
Q 004164 147 LMEPELGHKLGNQYLSEVKRLLKS---GGKFVCLTLA 180 (771)
Q Consensus 147 l~~~~~~~~~~~~~l~~i~rvLkp---GG~~ii~~~~ 180 (771)
+.+++ ..++|++++++|+| ||++++.+..
T Consensus 264 ~~d~~-----~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 264 WNDEQ-----SLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp SCHHH-----HHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred CCHHH-----HHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 86544 56999999999999 9999998865
No 283
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.83 E-value=8.5e-09 Score=106.19 Aligned_cols=147 Identities=16% Similarity=0.106 Sum_probs=107.2
Q ss_pred ccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeec
Q 004164 47 YAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDM 125 (771)
Q Consensus 47 ~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~ 125 (771)
...+..+...+...+. +..+|||||||.|-++..++.. +..+|+++|+++.+++.+++.+...+.+.++.+.|.
T Consensus 116 Lp~lD~fY~~i~~~i~-----~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~ 190 (281)
T 3lcv_B 116 LPHLDEFYRELFRHLP-----RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADL 190 (281)
T ss_dssp GGGHHHHHHHHGGGSC-----CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred hHhHHHHHHHHHhccC-----CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeee
Confidence 3344444444555552 4679999999999999988877 567999999999999988887777777889999998
Q ss_pred CCCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEc-----Ccchhhcchhhh----h-ccC
Q 004164 126 TSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL-----AESHVLGLLFPK----F-RFG 195 (771)
Q Consensus 126 ~~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~-----~~~~~~~~l~~~----~-~~~ 195 (771)
..-+ +.+.||+|++.-+++++.+...+ ..+ ++...|+++|.+|-..- -.+.+.+..... . ..+
T Consensus 191 ~~~~-p~~~~DvaL~lkti~~Le~q~kg-----~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g 263 (281)
T 3lcv_B 191 LEDR-LDEPADVTLLLKTLPCLETQQRG-----SGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERS 263 (281)
T ss_dssp TTSC-CCSCCSEEEETTCHHHHHHHSTT-----HHH-HHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHT
T ss_pred cccC-CCCCcchHHHHHHHHHhhhhhhH-----HHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcC
Confidence 8765 45889999999999998765532 556 89999999999887654 122333222222 2 248
Q ss_pred cEEEEeecCC
Q 004164 196 WKMSVHAIPQ 205 (771)
Q Consensus 196 w~~~~~~i~~ 205 (771)
|.+.-..+++
T Consensus 264 ~~~~~~~~~n 273 (281)
T 3lcv_B 264 CRIQRLEIGN 273 (281)
T ss_dssp CCEEEEEETT
T ss_pred CceeeeeecC
Confidence 8776666654
No 284
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.82 E-value=1.5e-08 Score=105.46 Aligned_cols=153 Identities=14% Similarity=0.174 Sum_probs=98.9
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-CCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~-~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
...+||+||+|+|.++..+....+. +|++||+++.+++.|++.+.. ...++++++.+|..++.....
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~----------- 116 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIP----------- 116 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSC-----------
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhc-----------
Confidence 4678999999999999999988765 999999999999999998732 124689999999988754322
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCC-CCCCCCCCcCCcC---------cccHHHHHHHHHccCCCcEEEEEe
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDS-PDSSSGMTCPAAD---------FVEGSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s-~d~~~g~s~pp~~---------f~~~~fl~~~~~~L~~~Gilv~Nl 689 (771)
..+||+|++|.-- .....+..+|... ..-..+++.+.+.|+|||.|++-.
T Consensus 117 --------------------~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 117 --------------------KERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp --------------------TTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------------------cCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 3679999995311 0001122222111 112579999999999999999833
Q ss_pred ccCChhHHHHHHHHHHHh-ccce--EEee--ecCCccEEEEEec
Q 004164 690 VSRSQATKDMVISRMKMV-FNHL--FCLQ--LEEDVNLVLFGLS 728 (771)
Q Consensus 690 ~~~~~~~~~~v~~~l~~v-F~~v--~~~~--~~~~~N~Vl~a~~ 728 (771)
+... ...++..+++. |.-. ..+. .....+.+++...
T Consensus 177 --~~~~-~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 217 (259)
T 3lpm_A 177 --RPER-LLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGI 217 (259)
T ss_dssp --CTTT-HHHHHHHHHHTTEEEEEEEEEESSTTSCCSEEEEEEE
T ss_pred --cHHH-HHHHHHHHHHCCCceEEEEEeecCCCCCcEEEEEEEE
Confidence 2222 33456666653 3321 1111 2345667766543
No 285
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.81 E-value=1.9e-08 Score=104.12 Aligned_cols=122 Identities=20% Similarity=0.311 Sum_probs=94.9
Q ss_pred CCCCcEEEEeccccHHHHHHHHh-CCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 615 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~-~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~ 615 (771)
....+||++|+|+|.++..+... .|..+|++||+++.+++.|++.+ |+ .++++++.+|+.+. ..
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~---~~------- 159 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF--DDRVTIKLKDIYEG---IE------- 159 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC--TTTEEEECSCGGGC---CC-------
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC--CCceEEEECchhhc---cC-------
Confidence 45578999999999999999888 67889999999999999999987 54 46799999998753 11
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChh
Q 004164 616 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQA 695 (771)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~ 695 (771)
...||+|++|.... ..+++.+.+.|+|||.+++...+ ..
T Consensus 160 ------------------------~~~~D~v~~~~~~~---------------~~~l~~~~~~L~~gG~l~~~~~~--~~ 198 (255)
T 3mb5_A 160 ------------------------EENVDHVILDLPQP---------------ERVVEHAAKALKPGGFFVAYTPC--SN 198 (255)
T ss_dssp ------------------------CCSEEEEEECSSCG---------------GGGHHHHHHHEEEEEEEEEEESS--HH
T ss_pred ------------------------CCCcCEEEECCCCH---------------HHHHHHHHHHcCCCCEEEEEECC--HH
Confidence 25699999954211 56899999999999999987643 33
Q ss_pred HHHHHHHHHHHh---ccceEEe
Q 004164 696 TKDMVISRMKMV---FNHLFCL 714 (771)
Q Consensus 696 ~~~~v~~~l~~v---F~~v~~~ 714 (771)
....+...+++. |..+-.+
T Consensus 199 ~~~~~~~~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 199 QVMRLHEKLREFKDYFMKPRTI 220 (255)
T ss_dssp HHHHHHHHHHHTGGGBSCCEEE
T ss_pred HHHHHHHHHHHcCCCccccEEE
Confidence 345567777766 7655443
No 286
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.81 E-value=1.6e-08 Score=114.74 Aligned_cols=113 Identities=16% Similarity=0.166 Sum_probs=86.6
Q ss_pred CCCeEEEEcCCcchhHHHHHhc--CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCC-CCCCccEEEec--
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQF-MDETFDVILDK-- 141 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~--g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~-~~~sFDlVi~~-- 141 (771)
++.+|||+|||+|..+..+++. +.+.|+++|+|+.+++.++++....+ .++.++++|+.+++. .+++||+|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 7889999999999999999986 23689999999999998877765444 479999999988753 45789999973
Q ss_pred ----cccccccCcccc---------hHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 142 ----GGLDALMEPELG---------HKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 142 ----~~l~~l~~~~~~---------~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+++...++.... ......+|.++.++|||||++++++.+
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 233222111000 012468899999999999999998875
No 287
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.80 E-value=5.6e-09 Score=117.51 Aligned_cols=122 Identities=16% Similarity=0.168 Sum_probs=90.1
Q ss_pred HHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc--CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC-CCC
Q 004164 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ-FMD 132 (771)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~--g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~-~~~ 132 (771)
.+...+.. .++.+|||+|||+|..+..++.. +.+.|+++|+|+.+++.++++....+..+.++++|+.+++ +.+
T Consensus 92 l~a~~L~~---~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~ 168 (464)
T 3m6w_A 92 AVGVLLDP---KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFG 168 (464)
T ss_dssp HHHHHHCC---CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHC
T ss_pred HHHHhcCc---CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhcc
Confidence 34455543 57899999999999999999976 3358999999999999888776554434899999988875 346
Q ss_pred CCccEEEec------cccccccCccc-----c----hHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 133 ETFDVILDK------GGLDALMEPEL-----G----HKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 133 ~sFDlVi~~------~~l~~l~~~~~-----~----~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
++||+|++. +++..-++... . ......++.++.++|||||+++.++.+
T Consensus 169 ~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 169 TYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp SCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred ccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 899999952 22322111100 0 012478999999999999999998865
No 288
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.80 E-value=4.6e-08 Score=102.30 Aligned_cols=106 Identities=9% Similarity=0.152 Sum_probs=79.0
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC--CCCcEEEEEcCHHHHHHHHhhcC-CCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECM--PFVGIEAVELDLTMLNLAEDYFG-FTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~--p~~~i~~VEiD~~v~~vA~~~Fg-~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
....+||+||+|+|.++..|.+.+ |+.+|++||++|.|++.|++.+. .....+++++.+|..++ .
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~----~-------- 136 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI----A-------- 136 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC----C--------
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc----c--------
Confidence 345789999999999999888876 45799999999999999999862 22356899999997653 2
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEE
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 688 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~N 688 (771)
...||+|++-. . ..- .|++. -..+|+.+++.|+|||+|++-
T Consensus 137 -----------------------~~~~d~v~~~~--~--l~~--~~~~~--~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 137 -----------------------IENASMVVLNF--T--LQF--LEPSE--RQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp -----------------------CCSEEEEEEES--C--GGG--SCHHH--HHHHHHHHHHHEEEEEEEEEE
T ss_pred -----------------------ccccccceeee--e--eee--cCchh--HhHHHHHHHHHcCCCcEEEEE
Confidence 24599998721 1 000 01111 146899999999999999974
No 289
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.79 E-value=1.7e-08 Score=103.87 Aligned_cols=119 Identities=12% Similarity=0.152 Sum_probs=88.6
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
...+||+||+|+|.++..|....|..+|++||+++.+++.|++.+ |+ ++++++.+|+.++.....
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~~~~~--------- 137 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQL---ENTTFCHDRAETFGQRKD--------- 137 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC---SSEEEEESCHHHHTTCTT---------
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CCEEEEeccHHHhccccc---------
Confidence 456899999999999888888888889999999999999999875 54 359999999987631100
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHH
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 697 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~ 697 (771)
...+||+|+++... --..+++.+.+.|+|||.|++-.........
T Consensus 138 ---------------------~~~~fD~V~~~~~~--------------~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~ 182 (240)
T 1xdz_A 138 ---------------------VRESYDIVTARAVA--------------RLSVLSELCLPLVKKNGLFVALKAASAEEEL 182 (240)
T ss_dssp ---------------------TTTCEEEEEEECCS--------------CHHHHHHHHGGGEEEEEEEEEEECC-CHHHH
T ss_pred ---------------------ccCCccEEEEeccC--------------CHHHHHHHHHHhcCCCCEEEEEeCCCchHHH
Confidence 02579999986521 0278999999999999999985433333333
Q ss_pred HHHHHHHHH
Q 004164 698 DMVISRMKM 706 (771)
Q Consensus 698 ~~v~~~l~~ 706 (771)
..+...+++
T Consensus 183 ~~~~~~l~~ 191 (240)
T 1xdz_A 183 NAGKKAITT 191 (240)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444455544
No 290
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.79 E-value=1.7e-08 Score=107.79 Aligned_cols=89 Identities=20% Similarity=0.299 Sum_probs=68.2
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCC
Q 004164 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ 129 (771)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~ 129 (771)
+.+...+.+.+.. .++.+|||+|||+|.++..|++.+. +|+++|+++.+++.++++....+ ++++++++|+.+++
T Consensus 28 ~~i~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~La~~~~-~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~ 103 (299)
T 2h1r_A 28 PGILDKIIYAAKI---KSSDIVLEIGCGTGNLTVKLLPLAK-KVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV 103 (299)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEECCTTSTTHHHHTTTSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC
T ss_pred HHHHHHHHHhcCC---CCcCEEEEEcCcCcHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCC
Confidence 4555666666654 5778999999999999999998865 99999999999998887764333 68999999999887
Q ss_pred CCCCCccEEEeccccc
Q 004164 130 FMDETFDVILDKGGLD 145 (771)
Q Consensus 130 ~~~~sFDlVi~~~~l~ 145 (771)
++ +||+|+++...+
T Consensus 104 ~~--~~D~Vv~n~py~ 117 (299)
T 2h1r_A 104 FP--KFDVCTANIPYK 117 (299)
T ss_dssp CC--CCSEEEEECCGG
T ss_pred cc--cCCEEEEcCCcc
Confidence 54 899999875544
No 291
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.78 E-value=3.3e-08 Score=101.70 Aligned_cols=133 Identities=14% Similarity=0.129 Sum_probs=91.7
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcC------CCCCCCeeEEEcchHHHHHhhccCCcc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG------FTQDKSLKVHITDGIKFVREMKSSSAT 613 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg------~~~~~r~~v~i~Dg~~~l~~~~~~~~~ 613 (771)
....+||+||+|+|.++..|...+|...|++||+++.+++.|++... .....+++++.+|+.+++...-
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~----- 119 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFF----- 119 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHC-----
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhC-----
Confidence 34578999999999999999999999999999999999999986531 0112579999999987655321
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCC
Q 004164 614 DEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 693 (771)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 693 (771)
....||.|++....+.... .-.-..+....+|+.+.+.|+|||.|++.. ..
T Consensus 120 -------------------------~~~~~D~v~~~~~dp~~k~--~h~krr~~~~~~l~~~~~~LkpGG~l~~~t--d~ 170 (235)
T 3ckk_A 120 -------------------------YKGQLTKMFFLFPDPHFKR--TKHKWRIISPTLLAEYAYVLRVGGLVYTIT--DV 170 (235)
T ss_dssp -------------------------CTTCEEEEEEESCC-------------CCCHHHHHHHHHHEEEEEEEEEEE--SC
T ss_pred -------------------------CCcCeeEEEEeCCCchhhh--hhhhhhhhhHHHHHHHHHHCCCCCEEEEEe--CC
Confidence 1357999988432211000 000123556899999999999999999764 34
Q ss_pred hhHHHHHHHHHHH
Q 004164 694 QATKDMVISRMKM 706 (771)
Q Consensus 694 ~~~~~~v~~~l~~ 706 (771)
..+...+++.+.+
T Consensus 171 ~~~~~~~~~~l~~ 183 (235)
T 3ckk_A 171 LELHDWMCTHFEE 183 (235)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 4444444555544
No 292
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.78 E-value=1.8e-08 Score=98.14 Aligned_cols=108 Identities=13% Similarity=0.119 Sum_probs=84.7
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~-~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
...+||++|+|+|.++..+... +..+|++||+++.+++.|++.+... ..++++++.+|+.+++....
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----------- 98 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLT----------- 98 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBC-----------
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhc-----------
Confidence 4578999999999998888877 5569999999999999999987322 13579999999999876533
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCc-CcccHHHHHHHH--HccCCCcEEEEEeccCC
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAA-DFVEGSFLLTVK--DALSEQGLFIVNLVSRS 693 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~-~f~~~~fl~~~~--~~L~~~Gilv~Nl~~~~ 693 (771)
..||+|++|. |- .....++++.+. +.|+|||++++......
T Consensus 99 ---------------------~~fD~i~~~~------------~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 99 ---------------------GRFDLVFLDP------------PYAKETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp ---------------------SCEEEEEECC------------SSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred ---------------------CCCCEEEECC------------CCCcchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 4599999852 11 112367788887 88999999999876554
No 293
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.76 E-value=8.3e-08 Score=108.07 Aligned_cols=175 Identities=13% Similarity=0.106 Sum_probs=112.7
Q ss_pred ccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc--------------CCCeEEEEcCCHHHHHHHHHHhh
Q 004164 47 YAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--------------GFHGITNVDFSKVVISDMLRRNV 112 (771)
Q Consensus 47 ~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~--------------g~~~V~~vDiS~~~i~~~~~~~~ 112 (771)
|.....+...+.+++.. .++.+|||+|||+|.+...+++. ...+++|+|+++.+++.++..+.
T Consensus 153 fyTP~~v~~~mv~~l~~---~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 153 YFTPRPLIQAMVDCINP---QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp GCCCHHHHHHHHHHHCC---CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred ccCcHHHHHHHHHHhCC---CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 33455677788888764 56789999999999999888764 12479999999999987766554
Q ss_pred cCCC---CcEEEEeecCCCCCCCCCccEEEeccccccccCcccc----------hHHHHHHHHHHHHccccCeEEEEEEc
Q 004164 113 RDRS---DMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELG----------HKLGNQYLSEVKRLLKSGGKFVCLTL 179 (771)
Q Consensus 113 ~~~~---~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l~~~~~~----------~~~~~~~l~~i~rvLkpGG~~ii~~~ 179 (771)
..+. +..+.++|....+.. .+||+|+++-.+......... ......++..+.++|+|||+++++..
T Consensus 230 l~g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HhCCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 3332 678999999887644 489999998766653322100 01124789999999999999988874
Q ss_pred Cc----chhhcchhhhh-ccCcEEEEeecCCCCCCCCCCccEEEEEEEcCC
Q 004164 180 AE----SHVLGLLFPKF-RFGWKMSVHAIPQKSSSEPSLQTFMVVADKENS 225 (771)
Q Consensus 180 ~~----~~~~~~l~~~~-~~~w~~~~~~i~~~~~~~~~l~~f~~v~~k~~~ 225 (771)
.. ......+.... ...+...+..++...=.....+..+++++|.+.
T Consensus 309 ~~~L~~~~~~~~iR~~L~~~~~l~~ii~lp~~~F~~t~v~t~Il~~~k~~~ 359 (445)
T 2okc_A 309 DNVLFEAGAGETIRKRLLQDFNLHTILRLPTGIFYAQGVKANVLFFSKGQP 359 (445)
T ss_dssp HHHHHCSTHHHHHHHHHHHHEEEEEEEECCSSSSSSTTCCEEEEEEEESSC
T ss_pred CcccccCcHHHHHHHHHHhcCcEEEEEeCCCCCccCCCCCEEEEEEECCCC
Confidence 31 11111122222 122223344444321122356667777777654
No 294
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.75 E-value=5.3e-08 Score=102.39 Aligned_cols=137 Identities=15% Similarity=0.094 Sum_probs=99.4
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCC-CcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPF-VGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~-~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
...+||++|+|.|..+..|...+++ .+|++||+++.+++.|++.+ |+ ++++++.+|+.++......
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~---~~v~~~~~D~~~~~~~~~~------- 152 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV---LNTIIINADMRKYKDYLLK------- 152 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCHHHHHHHHHH-------
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC---CcEEEEeCChHhcchhhhh-------
Confidence 4568999999999999999998776 79999999999999999886 44 3799999999988653210
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCC----------cCcccHHHHHHHHHccCCCcEEE
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPA----------ADFVEGSFLLTVKDALSEQGLFI 686 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp----------~~f~~~~fl~~~~~~L~~~Gilv 686 (771)
....||+|++|+-.+. .|+.-.. ..-....+|+.+.+.|+|||.++
T Consensus 153 ----------------------~~~~fD~Vl~d~Pcs~--~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv 208 (274)
T 3ajd_A 153 ----------------------NEIFFDKILLDAPCSG--NIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELV 208 (274)
T ss_dssp ----------------------TTCCEEEEEEEECCC--------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEE
T ss_pred ----------------------ccccCCEEEEcCCCCC--CcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 0256999999863321 1111000 00134789999999999999999
Q ss_pred EEeccCChhHHHHHHHHHHHhccce
Q 004164 687 VNLVSRSQATKDMVISRMKMVFNHL 711 (771)
Q Consensus 687 ~Nl~~~~~~~~~~v~~~l~~vF~~v 711 (771)
+...+..++..+.++..+.+.++..
T Consensus 209 ~stcs~~~~ene~~v~~~l~~~~~~ 233 (274)
T 3ajd_A 209 YSTCSMEVEENEEVIKYILQKRNDV 233 (274)
T ss_dssp EEESCCCTTSSHHHHHHHHHHCSSE
T ss_pred EEECCCChHHhHHHHHHHHHhCCCc
Confidence 9887766555566677666555543
No 295
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.75 E-value=4.9e-08 Score=99.20 Aligned_cols=156 Identities=11% Similarity=0.118 Sum_probs=99.7
Q ss_pred CCCCcEEEEecc-ccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 540 GKSVKAVVIGLG-AGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 540 ~~~~~vLviGlG-~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
....+||+||+| +|.++..+.... ..+|++||+|+.+++.|++.+....- +++++.+|+..+ ...
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~-~~~----------- 119 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGII-KGV----------- 119 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSS-TTT-----------
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhh-hhc-----------
Confidence 356799999999 999999888875 56999999999999999988732111 799999997422 111
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCC-CCCCCCCcCC--------cCcccHHHHHHHHHccCCCcEEEEEe
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSP-DSSSGMTCPA--------ADFVEGSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~-d~~~g~s~pp--------~~f~~~~fl~~~~~~L~~~Gilv~Nl 689 (771)
...+||+|+++.--. .......-|. ..-.-..+++.+.+.|+|||.|++.+
T Consensus 120 --------------------~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 179 (230)
T 3evz_A 120 --------------------VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYL 179 (230)
T ss_dssp --------------------CCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred --------------------ccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 136799999863110 0000000000 00012789999999999999999876
Q ss_pred ccCChhHHHHHHHHHHHhccceEEeeec--CCccEEEEEecCC
Q 004164 690 VSRSQATKDMVISRMKMVFNHLFCLQLE--EDVNLVLFGLSSE 730 (771)
Q Consensus 690 ~~~~~~~~~~v~~~l~~vF~~v~~~~~~--~~~N~Vl~a~~~~ 730 (771)
..+ ......+.+.+++..-.+..++.. .....++.-.+.+
T Consensus 180 ~~~-~~~~~~~~~~l~~~g~~~~~~~~~~g~~~~~~l~f~~~~ 221 (230)
T 3evz_A 180 PDK-EKLLNVIKERGIKLGYSVKDIKFKVGTRWRHSLIFFKGI 221 (230)
T ss_dssp ESC-HHHHHHHHHHHHHTTCEEEEEEECCCC-CEEEEEEECCC
T ss_pred ccc-HhHHHHHHHHHHHcCCceEEEEecCCCeEEEEEEEeccc
Confidence 443 344456677777764455444443 3344454444443
No 296
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.74 E-value=4.7e-08 Score=100.88 Aligned_cols=129 Identities=19% Similarity=0.281 Sum_probs=91.9
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc-----------CCCCCCCeeEEEcchHHHHHhhcc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF-----------GFTQDKSLKVHITDGIKFVREMKS 609 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F-----------g~~~~~r~~v~i~Dg~~~l~~~~~ 609 (771)
...+||+||+|+|.++..+....|...|++||+++.+++.|++.+ ++ ++++++.+|+.+++...-
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~---~nv~~~~~D~~~~l~~~~- 124 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF---QNINVLRGNAMKFLPNFF- 124 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT---TTEEEEECCTTSCGGGTS-
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC---CcEEEEeccHHHHHHHhc-
Confidence 457899999999999999999999889999999999999998865 33 469999999988665421
Q ss_pred CCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEe
Q 004164 610 SSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 689 (771)
....+|.|++....+.... .-.-..++...+++.+.+.|+|||.|++..
T Consensus 125 -----------------------------~~~~~d~v~~~~p~p~~k~--~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 125 -----------------------------EKGQLSKMFFCFPDPHFKQ--RKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp -----------------------------CTTCEEEEEEESCCCC--------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----------------------------cccccCEEEEECCCccccc--chhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 1356899887542221100 000123456899999999999999999843
Q ss_pred ccCChhHHHHHHHHHHH
Q 004164 690 VSRSQATKDMVISRMKM 706 (771)
Q Consensus 690 ~~~~~~~~~~v~~~l~~ 706 (771)
....+.+.+...+..
T Consensus 174 --d~~~~~~~~~~~~~~ 188 (246)
T 2vdv_E 174 --DVKDLHEWMVKHLEE 188 (246)
T ss_dssp --SCHHHHHHHHHHHHH
T ss_pred --ccHHHHHHHHHHHHh
Confidence 344444444444433
No 297
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.74 E-value=1.3e-08 Score=112.36 Aligned_cols=112 Identities=15% Similarity=0.075 Sum_probs=85.2
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCC----CCCCccEEEecc
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQF----MDETFDVILDKG 142 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~----~~~sFDlVi~~~ 142 (771)
++.+|||+|||+|.++..++.. ..+|+++|+|+.+++.+++.+...+ .+++++++|+.+... .+++||+|++..
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 4679999999999999999988 5589999999999998877765544 459999999987531 257899999754
Q ss_pred ccccccCcc--cchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 143 GLDALMEPE--LGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 143 ~l~~l~~~~--~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
......... ........++.++.++|+|||++++.+.+
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 332211100 00123678999999999999999998876
No 298
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.74 E-value=8.6e-08 Score=96.24 Aligned_cols=115 Identities=9% Similarity=0.011 Sum_probs=88.1
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
....+||+||+|+|.++..+... ..+|++||+++.+++.|++.. |+ .++++++.+|+.+.+...
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~~~~~~--------- 120 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGL--SPRMRAVQGTAPAALADL--------- 120 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCTTGGGTTS---------
T ss_pred CCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCC--CCCEEEEeCchhhhcccC---------
Confidence 34578999999999999988887 569999999999999999885 54 347999999998753321
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhH
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQAT 696 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~ 696 (771)
..||+|+++. . + +.++++.+.+.|+|||.+++..... +.
T Consensus 121 ------------------------~~~D~v~~~~--~-----~--------~~~~l~~~~~~LkpgG~lv~~~~~~--~~ 159 (204)
T 3njr_A 121 ------------------------PLPEAVFIGG--G-----G--------SQALYDRLWEWLAPGTRIVANAVTL--ES 159 (204)
T ss_dssp ------------------------CCCSEEEECS--C-----C--------CHHHHHHHHHHSCTTCEEEEEECSH--HH
T ss_pred ------------------------CCCCEEEECC--c-----c--------cHHHHHHHHHhcCCCcEEEEEecCc--cc
Confidence 3599999853 1 1 1339999999999999999987543 33
Q ss_pred HHHHHHHHHHhc
Q 004164 697 KDMVISRMKMVF 708 (771)
Q Consensus 697 ~~~v~~~l~~vF 708 (771)
...+...+++.-
T Consensus 160 ~~~~~~~l~~~g 171 (204)
T 3njr_A 160 ETLLTQLHARHG 171 (204)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhCC
Confidence 344556666553
No 299
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.73 E-value=1.6e-08 Score=113.78 Aligned_cols=122 Identities=16% Similarity=0.107 Sum_probs=89.3
Q ss_pred HHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc--CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCC-CC
Q 004164 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ-FM 131 (771)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~--g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~-~~ 131 (771)
.+...+.. .++.+|||+|||+|..+..++.. +.+.|+++|+|+.+++.+++.....+ .++.+.+.|+.+++ ..
T Consensus 96 l~~~~L~~---~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~ 172 (456)
T 3m4x_A 96 IVGTAAAA---KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHF 172 (456)
T ss_dssp HHHHHHCC---CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHH
T ss_pred HHHHHcCC---CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhc
Confidence 34445543 57899999999999999999876 33689999999999998877665444 56899999988764 33
Q ss_pred CCCccEEEeccccc---ccc-Cccc-------c----hHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 132 DETFDVILDKGGLD---ALM-EPEL-------G----HKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 132 ~~sFDlVi~~~~l~---~l~-~~~~-------~----~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
+++||+|++..... .+. +++. . ......++.++.++|||||+++.++.+
T Consensus 173 ~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs 236 (456)
T 3m4x_A 173 SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCT 236 (456)
T ss_dssp TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEee
Confidence 57899999643211 111 1110 0 012458899999999999999998875
No 300
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.73 E-value=8.2e-09 Score=106.28 Aligned_cols=99 Identities=14% Similarity=0.164 Sum_probs=78.5
Q ss_pred CCcEEEEeccccHHHHHHHHh----CCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHH--HHhhccCCcccc
Q 004164 542 SVKAVVIGLGAGLLPMFLHEC----MPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKF--VREMKSSSATDE 615 (771)
Q Consensus 542 ~~~vLviGlG~G~l~~~L~~~----~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~--l~~~~~~~~~~~ 615 (771)
+.+||+||+|+|.++..|... .|..+|++||+++.+++.|+. + .++++++++|+.++ +....
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~---~--~~~v~~~~gD~~~~~~l~~~~------- 149 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS---D--MENITLHQGDCSDLTTFEHLR------- 149 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG---G--CTTEEEEECCSSCSGGGGGGS-------
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc---c--CCceEEEECcchhHHHHHhhc-------
Confidence 468999999999999988887 577899999999999999982 2 36899999999764 22211
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHH-ccCCCcEEEEEe
Q 004164 616 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKD-ALSEQGLFIVNL 689 (771)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~-~L~~~Gilv~Nl 689 (771)
...||+|++|.... --..+|..+.+ .|+|||+|++.-
T Consensus 150 ------------------------~~~fD~I~~d~~~~-------------~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 150 ------------------------EMAHPLIFIDNAHA-------------NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp ------------------------SSCSSEEEEESSCS-------------SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred ------------------------cCCCCEEEECCchH-------------hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 23699999976421 12678999996 999999999853
No 301
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.73 E-value=2.1e-08 Score=104.47 Aligned_cols=149 Identities=15% Similarity=0.157 Sum_probs=100.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHh-------CCC-----CcEEEEEcCH--------------HHHHHHHhhcC-------
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHEC-------MPF-----VGIEAVELDL--------------TMLNLAEDYFG------- 586 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~-------~p~-----~~i~~VEiD~--------------~v~~vA~~~Fg------- 586 (771)
..+.+||+||.|+|.....+... .|. .++++||.+| .+.++|++.+.
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 35679999999999665544332 563 5899999998 34445655432
Q ss_pred ------CC-CCCCeeEEEcchHHHHHhhccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCC
Q 004164 587 ------FT-QDKSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGM 659 (771)
Q Consensus 587 ------~~-~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~ 659 (771)
+. ...+++++++|+.+.+..... .....||+|++|.+++..
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~----------------------------~~~~~~D~iflD~fsp~~---- 186 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDD----------------------------SLNQKVDAWFLDGFAPAK---- 186 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCG----------------------------GGTTCEEEEEECSSCTTT----
T ss_pred chhheeccCCceEEEEEECcHHHHHhhccc----------------------------ccCCeEEEEEECCCCccc----
Confidence 21 124688999999999877531 001379999999887632
Q ss_pred CcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHHHHHHHHHHHh-ccceEEeeecCCccEEEEEecCC
Q 004164 660 TCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMVISRMKMV-FNHLFCLQLEEDVNLVLFGLSSE 730 (771)
Q Consensus 660 s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~v~~~l~~v-F~~v~~~~~~~~~N~Vl~a~~~~ 730 (771)
.+.+++.++|+.+.++|+|||+|+. ++.... +...|+++ |. +...+-...-..++.|.+..
T Consensus 187 ---~p~lw~~~~l~~l~~~L~pGG~l~t--ysaa~~----vrr~L~~aGF~-v~~~~g~~~kr~m~~a~~~~ 248 (257)
T 2qy6_A 187 ---NPDMWTQNLFNAMARLARPGGTLAT--FTSAGF----VRRGLQEAGFT-MQKRKGFGRKREMLCGVMEQ 248 (257)
T ss_dssp ---CGGGCCHHHHHHHHHHEEEEEEEEE--SCCBHH----HHHHHHHHTEE-EEEECCSTTCCCEEEEEEC-
T ss_pred ---ChhhcCHHHHHHHHHHcCCCcEEEE--EeCCHH----HHHHHHHCCCE-EEeCCCCCCCCceEEEEecC
Confidence 4589999999999999999999993 454443 44556666 54 44444333344667776554
No 302
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.73 E-value=2.2e-08 Score=99.21 Aligned_cols=118 Identities=9% Similarity=0.060 Sum_probs=84.8
Q ss_pred CCCcEEEEeccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiD~~v~~vA~~~Fg~~-~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
...+||++|+|+|.++..+...+ |..+|++||+++.+++.|++.+... ..++++++.+|+.++....
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~----------- 90 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYI----------- 90 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTC-----------
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhc-----------
Confidence 45689999999999999888875 5669999999999999999987321 1468999999986653211
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCC-CCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDS-PDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s-~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
..+||+|++|..- +....... ...-....+++.+.+.|+|||.+++..+..
T Consensus 91 ---------------------~~~fD~v~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 91 ---------------------DCPVKAVMFNLGYLPSGDHSIS--TRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp ---------------------CSCEEEEEEEESBCTTSCTTCB--CCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred ---------------------cCCceEEEEcCCcccCcccccc--cCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 2679999997521 10000000 000012469999999999999999887543
No 303
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.72 E-value=2.7e-08 Score=105.70 Aligned_cols=91 Identities=10% Similarity=0.057 Sum_probs=76.1
Q ss_pred hhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC
Q 004164 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ 129 (771)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~ 129 (771)
.+.+...+.+.+.. .++.+|||||||+|.++..|++.+. +|+++|+++.+++.++++.. ..++++++++|+.+++
T Consensus 35 d~~i~~~Iv~~l~~---~~~~~VLEIG~G~G~lT~~La~~~~-~V~aVEid~~li~~a~~~~~-~~~~v~vi~gD~l~~~ 109 (295)
T 3gru_A 35 DKNFVNKAVESANL---TKDDVVLEIGLGKGILTEELAKNAK-KVYVIEIDKSLEPYANKLKE-LYNNIEIIWGDALKVD 109 (295)
T ss_dssp CHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHSS-EEEEEESCGGGHHHHHHHHH-HCSSEEEEESCTTTSC
T ss_pred CHHHHHHHHHhcCC---CCcCEEEEECCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhc-cCCCeEEEECchhhCC
Confidence 34566666676654 5788999999999999999999865 99999999999998877764 4578999999999998
Q ss_pred CCCCCccEEEeccccc
Q 004164 130 FMDETFDVILDKGGLD 145 (771)
Q Consensus 130 ~~~~sFDlVi~~~~l~ 145 (771)
+++.+||+|+++...+
T Consensus 110 ~~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 110 LNKLDFNKVVANLPYQ 125 (295)
T ss_dssp GGGSCCSEEEEECCGG
T ss_pred cccCCccEEEEeCccc
Confidence 8888899999875544
No 304
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.72 E-value=7.9e-08 Score=104.02 Aligned_cols=133 Identities=14% Similarity=0.171 Sum_probs=92.0
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
+...+||++|+|+|.++..+.... .+|++||+++.+++.|++.+ ++ .+.+++++.+|+.+++.....
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~g--a~V~~VD~s~~al~~a~~n~~~~gl-~~~~v~~i~~D~~~~l~~~~~------- 221 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAG--AEVTHVDASKKAIGWAKENQVLAGL-EQAPIRWICEDAMKFIQREER------- 221 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHTC-TTSCEEEECSCHHHHHHHHHH-------
T ss_pred CCCCcEEEcccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCC-CccceEEEECcHHHHHHHHHh-------
Confidence 345689999999999999888864 39999999999999999987 44 222699999999999865420
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCc-----ccHHHHHHHHHccCCCcEEEEEecc
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF-----VEGSFLLTVKDALSEQGLFIVNLVS 691 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f-----~~~~fl~~~~~~L~~~Gilv~Nl~~ 691 (771)
.+.+||+||+|.-.- +.+ +.... .-..+++.+.++|+|||+|++...+
T Consensus 222 ----------------------~~~~fD~Ii~dPP~~----~~~-~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 222 ----------------------RGSTYDIILTDPPKF----GRG-THGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp ----------------------HTCCBSEEEECCCSE----EEC-TTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred ----------------------cCCCceEEEECCccc----cCC-chHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 025799999964210 000 00001 1257899999999999997765555
Q ss_pred CChhHHHHHHHHHHHhcc
Q 004164 692 RSQATKDMVISRMKMVFN 709 (771)
Q Consensus 692 ~~~~~~~~v~~~l~~vF~ 709 (771)
........+...+++.+.
T Consensus 275 ~~~~~~~~~~~~l~~a~~ 292 (332)
T 2igt_A 275 SIRASFYSMHELMRETMR 292 (332)
T ss_dssp CTTSCHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHH
Confidence 433223344555555554
No 305
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.72 E-value=1e-07 Score=107.30 Aligned_cols=133 Identities=13% Similarity=0.105 Sum_probs=103.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCC-CcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPF-VGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 615 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~-~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~ 615 (771)
....+||++|+|.|..+..|...++. .+|++||+++.+++.|++.. |+ . +.++.+|+.++.....
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~---~-v~~~~~Da~~l~~~~~------- 168 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA---P-LAVTQAPPRALAEAFG------- 168 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC---C-CEEECSCHHHHHHHHC-------
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---e-EEEEECCHHHhhhhcc-------
Confidence 34578999999999999999998865 69999999999999999886 65 3 8999999998754332
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCc--------------ccHHHHHHHHHccCC
Q 004164 616 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF--------------VEGSFLLTVKDALSE 681 (771)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f--------------~~~~fl~~~~~~L~~ 681 (771)
..||+|++|+-.+. .|+....+.. +..++|+.+.+.|+|
T Consensus 169 -------------------------~~FD~Il~D~PcSg--~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp 221 (464)
T 3m6w_A 169 -------------------------TYFHRVLLDAPCSG--EGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGP 221 (464)
T ss_dssp -------------------------SCEEEEEEECCCCC--GGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEE
T ss_pred -------------------------ccCCEEEECCCcCC--ccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 57999999984431 2222111221 127899999999999
Q ss_pred CcEEEEEeccCChhHHHHHHHHHHHhccc
Q 004164 682 QGLFIVNLVSRSQATKDMVISRMKMVFNH 710 (771)
Q Consensus 682 ~Gilv~Nl~~~~~~~~~~v~~~l~~vF~~ 710 (771)
||.|++...+-..+..+.++..+.+-++.
T Consensus 222 GG~LvysTCs~~~eEne~vv~~~l~~~~~ 250 (464)
T 3m6w_A 222 GGVLVYSTCTFAPEENEGVVAHFLKAHPE 250 (464)
T ss_dssp EEEEEEEESCCCGGGTHHHHHHHHHHCTT
T ss_pred CcEEEEEeccCchhcCHHHHHHHHHHCCC
Confidence 99999988877777777888888776654
No 306
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.72 E-value=6.3e-08 Score=102.57 Aligned_cols=102 Identities=14% Similarity=0.065 Sum_probs=73.4
Q ss_pred CCCCeEEEEcC------CcchhHHHHHhc-C-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEE-EEeecCCCCCCCCCccE
Q 004164 67 SPPPQILVPGC------GNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRSDMRW-RVMDMTSMQFMDETFDV 137 (771)
Q Consensus 67 ~~~~~ILDiGC------G~G~ls~~La~~-g-~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~-~~~D~~~l~~~~~sFDl 137 (771)
.++.+|||+|| |+|. ..+++. + ..+|+|+|+|+. . +++++ +++|+.+++++ ++||+
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v----~~v~~~i~gD~~~~~~~-~~fD~ 126 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V----SDADSTLIGDCATVHTA-NKWDL 126 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B----CSSSEEEESCGGGCCCS-SCEEE
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C----CCCEEEEECccccCCcc-CcccE
Confidence 57889999999 5576 333433 4 358999999996 1 36889 99999988765 78999
Q ss_pred EEeccccccc----cCcccchHHHHHHHHHHHHccccCeEEEEEEcCcch
Q 004164 138 ILDKGGLDAL----MEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESH 183 (771)
Q Consensus 138 Vi~~~~l~~l----~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~ 183 (771)
|++....... .+........+.+++++.++|||||+|++..+....
T Consensus 127 Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~ 176 (290)
T 2xyq_A 127 IISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 176 (290)
T ss_dssp EEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred EEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 9986542211 111111234678999999999999999998765433
No 307
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.70 E-value=4.1e-08 Score=101.94 Aligned_cols=119 Identities=13% Similarity=0.114 Sum_probs=88.7
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
...+||+||+|+|.++..|...+|..+|++||+++.+++.|++.. |+ .+++++.+|+.++.....
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l---~~v~~~~~d~~~~~~~~~--------- 147 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL---KGARALWGRAEVLAREAG--------- 147 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC---SSEEEEECCHHHHTTSTT---------
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC---CceEEEECcHHHhhcccc---------
Confidence 457899999999999999999999999999999999999999876 55 349999999988732100
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHH
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 697 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~ 697 (771)
...+||+|+...... -..+++.+.+.|+|||.|++-.-....+..
T Consensus 148 ---------------------~~~~fD~I~s~a~~~--------------~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~ 192 (249)
T 3g89_A 148 ---------------------HREAYARAVARAVAP--------------LCVLSELLLPFLEVGGAAVAMKGPRVEEEL 192 (249)
T ss_dssp ---------------------TTTCEEEEEEESSCC--------------HHHHHHHHGGGEEEEEEEEEEECSCCHHHH
T ss_pred ---------------------cCCCceEEEECCcCC--------------HHHHHHHHHHHcCCCeEEEEEeCCCcHHHH
Confidence 125799999854321 168999999999999999874432233333
Q ss_pred HHHHHHHHH
Q 004164 698 DMVISRMKM 706 (771)
Q Consensus 698 ~~v~~~l~~ 706 (771)
..+...++.
T Consensus 193 ~~~~~~l~~ 201 (249)
T 3g89_A 193 APLPPALER 201 (249)
T ss_dssp TTHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333344433
No 308
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.70 E-value=1.4e-07 Score=92.17 Aligned_cols=119 Identities=19% Similarity=0.243 Sum_probs=90.7
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-CCCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~-~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
....+||++|+|+|.++..+.... .+|++||+++.+++.|++.+.. ...++++++.+|..+.+...
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----------- 98 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI----------- 98 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-----------
Confidence 345789999999999999888877 6999999999999999997621 12367999999998854331
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHHH
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKD 698 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~ 698 (771)
..||+|+++..- .. -..+++.+.+.|+|||.+++.... .....
T Consensus 99 ----------------------~~~D~v~~~~~~-----------~~--~~~~l~~~~~~l~~gG~l~~~~~~--~~~~~ 141 (192)
T 1l3i_A 99 ----------------------PDIDIAVVGGSG-----------GE--LQEILRIIKDKLKPGGRIIVTAIL--LETKF 141 (192)
T ss_dssp ----------------------CCEEEEEESCCT-----------TC--HHHHHHHHHHTEEEEEEEEEEECB--HHHHH
T ss_pred ----------------------CCCCEEEECCch-----------HH--HHHHHHHHHHhcCCCcEEEEEecC--cchHH
Confidence 369999984211 11 278999999999999999987654 33344
Q ss_pred HHHHHHHHh-c
Q 004164 699 MVISRMKMV-F 708 (771)
Q Consensus 699 ~v~~~l~~v-F 708 (771)
.+...+++. |
T Consensus 142 ~~~~~l~~~g~ 152 (192)
T 1l3i_A 142 EAMECLRDLGF 152 (192)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHCCC
Confidence 566777665 6
No 309
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.69 E-value=2.5e-07 Score=103.81 Aligned_cols=131 Identities=8% Similarity=0.118 Sum_probs=88.4
Q ss_pred HHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCC----C
Q 004164 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTS----M 128 (771)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~----l 128 (771)
...+.+++.. .++.+|||+|||+|.++..|++.+. +|+|+|+|+.+++.+++.+...+ .+++|+++|+.+ +
T Consensus 275 ~~~~~~~l~~---~~~~~VLDlgcG~G~~~~~la~~~~-~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~ 350 (433)
T 1uwv_A 275 VARALEWLDV---QPEDRVLDLFCGMGNFTLPLATQAA-SVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQ 350 (433)
T ss_dssp HHHHHHHHTC---CTTCEEEEESCTTTTTHHHHHTTSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSS
T ss_pred HHHHHHhhcC---CCCCEEEECCCCCCHHHHHHHhhCC-EEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhh
Confidence 3344455543 4678999999999999999998854 99999999999998877665444 479999999987 3
Q ss_pred CCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcchhhcchhhhhccCcEEEE
Q 004164 129 QFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSV 200 (771)
Q Consensus 129 ~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~~~~~l~~~~~~~w~~~~ 200 (771)
++.+++||+|++.-.-.. ...++..+.+ ++|++.+++. .....+...+......+|.+..
T Consensus 351 ~~~~~~fD~Vv~dPPr~g----------~~~~~~~l~~-~~p~~ivyvs-c~p~tlard~~~l~~~Gy~~~~ 410 (433)
T 1uwv_A 351 PWAKNGFDKVLLDPARAG----------AAGVMQQIIK-LEPIRIVYVS-CNPATLARDSEALLKAGYTIAR 410 (433)
T ss_dssp GGGTTCCSEEEECCCTTC----------CHHHHHHHHH-HCCSEEEEEE-SCHHHHHHHHHHHHHTTCEEEE
T ss_pred hhhcCCCCEEEECCCCcc----------HHHHHHHHHh-cCCCeEEEEE-CChHHHHhhHHHHHHCCcEEEE
Confidence 456678999997432211 1234444443 6787766654 3333333333333334676654
No 310
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.69 E-value=1.7e-08 Score=98.95 Aligned_cols=113 Identities=11% Similarity=0.111 Sum_probs=79.0
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
...+||+||+|+|.++..|... ..+|++||++|.+++.|++.+ |+ ++++++.+|...+ ....
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~---~~v~~~~~~~~~l-~~~~--------- 86 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGI---ENTELILDGHENL-DHYV--------- 86 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTC---CCEEEEESCGGGG-GGTC---------
T ss_pred CCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEeCcHHHH-Hhhc---------
Confidence 4578999999999999999887 569999999999999999987 44 5799998665442 1111
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCC-CCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSP-DSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~-d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
+.+||+|++++..- .....+.. ..-....+++.+.+.|+|||.|++-++..
T Consensus 87 ----------------------~~~fD~v~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 87 ----------------------REPIRAAIFNLGYLPSADKSVIT--KPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp ----------------------CSCEEEEEEEEC-------------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred ----------------------cCCcCEEEEeCCCCCCcchhccc--ChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 25799999874111 00000000 00112468899999999999999887654
No 311
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.69 E-value=8.2e-08 Score=100.87 Aligned_cols=147 Identities=15% Similarity=0.184 Sum_probs=101.3
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
...+||+||+|+|.++..+...+|..+|++||+++.++++|++.+ |+ ++++++.+|..+.+.
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~---~~v~~~~~d~~~~~~------------ 173 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI---KNIHILQSDWFSALA------------ 173 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC---CSEEEECCSTTGGGT------------
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEcchhhhcc------------
Confidence 346899999999999999999889899999999999999999887 44 369999999866421
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCC-----CC--CcCCcCc--------ccHHHHHHHHHccCCC
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSS-----GM--TCPAADF--------VEGSFLLTVKDALSEQ 682 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~-----g~--s~pp~~f--------~~~~fl~~~~~~L~~~ 682 (771)
..+||+|+.+.--..... ++ .-|...+ .-..+++.+.+.|+||
T Consensus 174 ----------------------~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lkpg 231 (276)
T 2b3t_A 174 ----------------------GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSG 231 (276)
T ss_dssp ----------------------TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEE
T ss_pred ----------------------cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCC
Confidence 246999999531100000 00 0122222 1367899999999999
Q ss_pred cEEEEEeccCChhHHHHHHHHHHHh-ccceEEeeecCCccEEEEEe
Q 004164 683 GLFIVNLVSRSQATKDMVISRMKMV-FNHLFCLQLEEDVNLVLFGL 727 (771)
Q Consensus 683 Gilv~Nl~~~~~~~~~~v~~~l~~v-F~~v~~~~~~~~~N~Vl~a~ 727 (771)
|.+++.......+ .+.+.+++. |..+...+--.+...+++|.
T Consensus 232 G~l~~~~~~~~~~---~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~ 274 (276)
T 2b3t_A 232 GFLLLEHGWQQGE---AVRQAFILAGYHDVETCRDYGDNERVTLGR 274 (276)
T ss_dssp EEEEEECCSSCHH---HHHHHHHHTTCTTCCEEECTTSSEEEEEEE
T ss_pred CEEEEEECchHHH---HHHHHHHHCCCcEEEEEecCCCCCcEEEEE
Confidence 9999876444333 344455444 76655555444566777764
No 312
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.68 E-value=3.1e-08 Score=95.26 Aligned_cols=109 Identities=13% Similarity=0.045 Sum_probs=83.1
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||++|+|+|.++..+....+. |++||+|+.+++.|++.+....- +++++.+|+.+++.....
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~----------- 106 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEAKA----------- 106 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHHHH-----------
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhhhc-----------
Confidence 4578999999999999988887654 99999999999999998732111 799999999998765431
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHH--HccCCCcEEEEEeccCC
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVK--DALSEQGLFIVNLVSRS 693 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~--~~L~~~Gilv~Nl~~~~ 693 (771)
...+||+|++|.--. -...++++.+. +.|+|||++++......
T Consensus 107 ------------------~~~~~D~i~~~~~~~------------~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 107 ------------------QGERFTVAFMAPPYA------------MDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp ------------------TTCCEEEEEECCCTT------------SCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred ------------------cCCceEEEEECCCCc------------hhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 124799999953110 12256777787 99999999999876554
No 313
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.68 E-value=7.1e-08 Score=107.35 Aligned_cols=123 Identities=22% Similarity=0.256 Sum_probs=90.1
Q ss_pred cccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc--CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEe
Q 004164 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVM 123 (771)
Q Consensus 46 w~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~--g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~ 123 (771)
.|.....+...+.+++.. .++.+|||+|||+|.++..+++. +..+++|+|+++.+++.+ .++.++++
T Consensus 20 ~~~TP~~l~~~~~~~~~~---~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------~~~~~~~~ 88 (421)
T 2ih2_A 20 RVETPPEVVDFMVSLAEA---PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------PWAEGILA 88 (421)
T ss_dssp -CCCCHHHHHHHHHHCCC---CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------TTEEEEES
T ss_pred eEeCCHHHHHHHHHhhcc---CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------CCCcEEeC
Confidence 344456777778888753 35679999999999999999875 345999999999877644 57899999
Q ss_pred ecCCCCCCCCCccEEEeccccccccCc--------ccc--------------hHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 124 DMTSMQFMDETFDVILDKGGLDALMEP--------ELG--------------HKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 124 D~~~l~~~~~sFDlVi~~~~l~~l~~~--------~~~--------------~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
|+.+... .++||+|+++-........ +.. .+....++..+.++|+|||+++++...
T Consensus 89 D~~~~~~-~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 89 DFLLWEP-GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp CGGGCCC-SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred ChhhcCc-cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 9988653 4789999997444332210 100 012346799999999999999988754
No 314
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.67 E-value=8.7e-08 Score=95.81 Aligned_cols=106 Identities=13% Similarity=0.112 Sum_probs=81.1
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-CCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 542 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~-~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
+.+||+||+|+|.++..|... +..++++||+++.+++.|++.+.- ...++++++.+|..+. .
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~------------ 106 (219)
T 3dlc_A 44 AGTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNI----P------------ 106 (219)
T ss_dssp EEEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBC----S------------
T ss_pred CCEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHC----C------------
Confidence 349999999999999999988 777999999999999999998621 1246899999998542 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCc-ccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF-VEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f-~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
....+||+|++.. . -..+ --..+|+.+++.|+|||.+++.....
T Consensus 107 -----------------~~~~~~D~v~~~~--~---------l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 107 -----------------IEDNYADLIVSRG--S---------VFFWEDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp -----------------SCTTCEEEEEEES--C---------GGGCSCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred -----------------CCcccccEEEECc--h---------HhhccCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 1136799999842 1 0111 12679999999999999999865433
No 315
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.67 E-value=4.9e-08 Score=97.42 Aligned_cols=104 Identities=13% Similarity=0.034 Sum_probs=81.3
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccccc
Q 004164 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHG 621 (771)
Q Consensus 542 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~ 621 (771)
..+||+||+|+|.++..+...+|..++++||+++.+++.|++.+....-++++++.+|..++. .
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---~------------- 129 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP---S------------- 129 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC---C-------------
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC---c-------------
Confidence 468999999999999999999888999999999999999998762211134999999986641 1
Q ss_pred cccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCC
Q 004164 622 NEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 693 (771)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 693 (771)
..+||+|+.... . --..+++.+++.|+|||.+++......
T Consensus 130 ------------------~~~~D~i~~~~~------------~--~~~~~l~~~~~~L~~gG~l~~~~~~~~ 169 (207)
T 1jsx_A 130 ------------------EPPFDGVISRAF------------A--SLNDMVSWCHHLPGEQGRFYALKGQMP 169 (207)
T ss_dssp ------------------CSCEEEEECSCS------------S--SHHHHHHHHTTSEEEEEEEEEEESSCC
T ss_pred ------------------cCCcCEEEEecc------------C--CHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 257999997321 0 026899999999999999998764433
No 316
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.67 E-value=7.7e-08 Score=97.91 Aligned_cols=106 Identities=22% Similarity=0.329 Sum_probs=83.9
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
..+.+||+||+|+|.++..+...+|..++++||+++.+++.|++.+.- ..+++++.+|+.++ .
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~----~----------- 105 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRG--NLKVKYIEADYSKY----D----------- 105 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCS--CTTEEEEESCTTTC----C-----------
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhcc--CCCEEEEeCchhcc----C-----------
Confidence 456799999999999999999999989999999999999999999853 33899999998653 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccH---HHHHHHHHccCCCcEEEEEeccC
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEG---SFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~---~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
. ...||+|++.. . -..+-+. .+|+.+++.|+|||.+++.....
T Consensus 106 ------------------~-~~~fD~v~~~~--~---------l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 106 ------------------F-EEKYDMVVSAL--S---------IHHLEDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp ------------------C-CSCEEEEEEES--C---------GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred ------------------C-CCCceEEEEeC--c---------cccCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 1 15799999842 1 1222222 48999999999999999865443
No 317
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.67 E-value=1.1e-07 Score=106.45 Aligned_cols=99 Identities=16% Similarity=0.156 Sum_probs=75.4
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCccEEEecccccc
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETFDVILDKGGLDA 146 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~ 146 (771)
.++.+|||+|||+|.++..|++.+. +|+++|+|+.+++.+++.+...+..++|+++|+.++.. .+||+|++...-..
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~~-~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~--~~fD~Vv~dPPr~g 365 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRGF-NVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSV--KGFDTVIVDPPRAG 365 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCC--TTCSEEEECCCTTC
T ss_pred CCCCEEEEeeccchHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCc--cCCCEEEEcCCccc
Confidence 3678999999999999999998865 99999999999998877665444339999999998743 28999997543211
Q ss_pred ccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 147 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 147 l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
+ ...+++.+. .|+|||++++..
T Consensus 366 ~---------~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 366 L---------HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp S---------CHHHHHHHH-HHCCSEEEEEES
T ss_pred h---------HHHHHHHHH-hcCCCcEEEEEC
Confidence 1 123555554 599999887764
No 318
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.66 E-value=8.9e-08 Score=105.36 Aligned_cols=143 Identities=14% Similarity=0.146 Sum_probs=99.3
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 542 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
..+||+||+|.|.++..+....|..+|++||+++.+++.|++.+ |+....+++++.+|+.+.+ .
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~---~---------- 289 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV---E---------- 289 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC---C----------
T ss_pred CCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC---C----------
Confidence 37899999999999999999999999999999999999999987 4322336788999987631 1
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHHH
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKD 698 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~ 698 (771)
..+||+|++|. +-.. +.. ...-...++++.+.+.|+|||.+++-. .+...+
T Consensus 290 ---------------------~~~fD~Ii~np--pfh~-~~~--~~~~~~~~~l~~~~~~LkpgG~l~iv~-n~~~~~-- 340 (375)
T 4dcm_A 290 ---------------------PFRFNAVLCNP--PFHQ-QHA--LTDNVAWEMFHHARRCLKINGELYIVA-NRHLDY-- 340 (375)
T ss_dssp ---------------------TTCEEEEEECC--CC----------CCHHHHHHHHHHHHEEEEEEEEEEE-ETTSCH--
T ss_pred ---------------------CCCeeEEEECC--Cccc-Ccc--cCHHHHHHHHHHHHHhCCCCcEEEEEE-ECCcCH--
Confidence 25799999953 1100 000 011123479999999999999999833 333332
Q ss_pred HHHHHHHHhccceEEeeecCCccEEEEEecC
Q 004164 699 MVISRMKMVFNHLFCLQLEEDVNLVLFGLSS 729 (771)
Q Consensus 699 ~v~~~l~~vF~~v~~~~~~~~~N~Vl~a~~~ 729 (771)
-..+.+.|..+-.+. .+..-.|+-+...
T Consensus 341 --~~~l~~~fg~~~~~a-~~~~F~V~~~~~~ 368 (375)
T 4dcm_A 341 --FHKLKKIFGNCTTIA-TNNKFVVLKAVKL 368 (375)
T ss_dssp --HHHHHHHHSCCEEEE-ECSSEEEEEEECC
T ss_pred --HHHHHHhcCCEEEEe-eCCCEEEEEEcCc
Confidence 355777888766554 3334445555433
No 319
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.66 E-value=1.7e-07 Score=95.65 Aligned_cols=144 Identities=15% Similarity=0.155 Sum_probs=97.2
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||+||+|+|.++.+|...+|..+|++||+++.+++.|++.... .+++.++.+|+.+......
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~--~~~v~~~~~d~~~~~~~~~------------ 139 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE--RENIIPILGDANKPQEYAN------------ 139 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT--CTTEEEEECCTTCGGGGTT------------
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc--CCCeEEEECCCCCcccccc------------
Confidence 45689999999999999999998767999999999999999988753 3689999999865211011
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC--Ch----
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR--SQ---- 694 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~--~~---- 694 (771)
. ...||+|+.|+...+ ....+++.+.+.|+|||.+++-+..+ +.
T Consensus 140 -----------------~-~~~~D~v~~~~~~~~------------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~ 189 (230)
T 1fbn_A 140 -----------------I-VEKVDVIYEDVAQPN------------QAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDP 189 (230)
T ss_dssp -----------------T-SCCEEEEEECCCSTT------------HHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCH
T ss_pred -----------------c-CccEEEEEEecCChh------------HHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCH
Confidence 1 146999997652211 23678999999999999999853211 11
Q ss_pred -hHHHHHHHHHHHh-ccceEEeeecC--CccEEEEEec
Q 004164 695 -ATKDMVISRMKMV-FNHLFCLQLEE--DVNLVLFGLS 728 (771)
Q Consensus 695 -~~~~~v~~~l~~v-F~~v~~~~~~~--~~N~Vl~a~~ 728 (771)
......+..|.+. |..+....+.. ..+.+++|.+
T Consensus 190 ~~~~~~~l~~l~~~Gf~~~~~~~~~~~~~~~~~v~~~k 227 (230)
T 1fbn_A 190 KEIFKEQKEILEAGGFKIVDEVDIEPFEKDHVMFVGIW 227 (230)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEECTTTSTTEEEEEEEE
T ss_pred HHhhHHHHHHHHHCCCEEEEEEccCCCccceEEEEEEe
Confidence 1111223355554 65444444332 2355666654
No 320
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.66 E-value=8.1e-08 Score=93.88 Aligned_cols=111 Identities=14% Similarity=0.161 Sum_probs=83.1
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~-~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
...+||++|+|+|.++..+... +..+|++||+|+.+++.|++.+... ..++++++.+|+.+++.....
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---------- 112 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYE---------- 112 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHH----------
T ss_pred CCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHh----------
Confidence 4568999999999998877764 5569999999999999999987321 135799999999998765420
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHH--HHccCCCcEEEEEeccC
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTV--KDALSEQGLFIVNLVSR 692 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~--~~~L~~~Gilv~Nl~~~ 692 (771)
...+||+|++|.- - .......+++.+ .+.|+|||++++.....
T Consensus 113 -------------------~~~~fD~i~~~~~--~---------~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 113 -------------------EKLQFDLVLLDPP--Y---------AKQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp -------------------TTCCEEEEEECCC--G---------GGCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred -------------------cCCCCCEEEECCC--C---------CchhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 1257999998531 0 011236777777 78899999999876544
No 321
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.66 E-value=9.7e-08 Score=98.58 Aligned_cols=120 Identities=19% Similarity=0.188 Sum_probs=89.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHh-CCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~-~p~~~i~~VEiD~~v~~vA~~~Fg~~-~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
....+||++|+|.|.++..+... .|..+|++||+++.+++.|++.+... ..++++++.+|+.+. ...
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--~~~--------- 163 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA--ELE--------- 163 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC--CCC---------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc--CCC---------
Confidence 34568999999999999988888 56789999999999999999987210 146899999998654 111
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHH
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 697 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~ 697 (771)
...||+|++|.... ..+++.+.+.|+|||.+++...+ ....
T Consensus 164 ----------------------~~~~D~v~~~~~~~---------------~~~l~~~~~~L~~gG~l~~~~~~--~~~~ 204 (258)
T 2pwy_A 164 ----------------------EAAYDGVALDLMEP---------------WKVLEKAALALKPDRFLVAYLPN--ITQV 204 (258)
T ss_dssp ----------------------TTCEEEEEEESSCG---------------GGGHHHHHHHEEEEEEEEEEESC--HHHH
T ss_pred ----------------------CCCcCEEEECCcCH---------------HHHHHHHHHhCCCCCEEEEEeCC--HHHH
Confidence 25799999964211 47899999999999999987643 3334
Q ss_pred HHHHHHHHHh-cc
Q 004164 698 DMVISRMKMV-FN 709 (771)
Q Consensus 698 ~~v~~~l~~v-F~ 709 (771)
..++..|++. |.
T Consensus 205 ~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 205 LELVRAAEAHPFR 217 (258)
T ss_dssp HHHHHHHTTTTEE
T ss_pred HHHHHHHHHCCCc
Confidence 4556666543 44
No 322
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.65 E-value=2.9e-07 Score=94.33 Aligned_cols=144 Identities=13% Similarity=0.174 Sum_probs=102.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
....+||.||+|+|.++..|.... |.-+|.+||++|.+++.|++... ..+++..+.+|....-. ..
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~--~~~ni~~V~~d~~~p~~-~~---------- 142 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVR--DRRNIFPILGDARFPEK-YR---------- 142 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHST--TCTTEEEEESCTTCGGG-GT----------
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhH--hhcCeeEEEEeccCccc-cc----------
Confidence 455789999999999999998864 67799999999999999988864 34578888888765311 11
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCC-----
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS----- 693 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~----- 693 (771)
.....+|+|+.|+.-.+ ....++.++++.|+|||.+++-+..++
T Consensus 143 -------------------~~~~~vDvVf~d~~~~~------------~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~ 191 (233)
T 4df3_A 143 -------------------HLVEGVDGLYADVAQPE------------QAAIVVRNARFFLRDGGYMLMAIKARSIDVTT 191 (233)
T ss_dssp -------------------TTCCCEEEEEECCCCTT------------HHHHHHHHHHHHEEEEEEEEEEEECCHHHHHT
T ss_pred -------------------cccceEEEEEEeccCCh------------hHHHHHHHHHHhccCCCEEEEEEecccCCCCC
Confidence 12367999999764332 126789999999999999998764442
Q ss_pred --hhHHHHHHHHHHHh-ccceEEeeec--CCccEEEEEe
Q 004164 694 --QATKDMVISRMKMV-FNHLFCLQLE--EDVNLVLFGL 727 (771)
Q Consensus 694 --~~~~~~v~~~l~~v-F~~v~~~~~~--~~~N~Vl~a~ 727 (771)
.......++.|++. |.-+-.+.+. +..+.++||.
T Consensus 192 p~~~~~~~ev~~L~~~GF~l~e~i~L~pf~~~H~lv~~~ 230 (233)
T 4df3_A 192 EPSEVYKREIKTLMDGGLEIKDVVHLDPFDRDHAMIYAV 230 (233)
T ss_dssp CCCHHHHHHHHHHHHTTCCEEEEEECTTTSTTEEEEEEC
T ss_pred ChHHHHHHHHHHHHHCCCEEEEEEccCCCCCceEEEEEE
Confidence 23445567777665 7644444332 2346666764
No 323
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.65 E-value=4.1e-08 Score=103.15 Aligned_cols=119 Identities=13% Similarity=0.185 Sum_probs=89.0
Q ss_pred CCCCcEEEEeccccHHHHHHHHh-CCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~-~p~~~i~~VEiD~~v~~vA~~~Fg~~-~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
....+||++|+|.|.++..+... .|..+|++||+++.+++.|++.+... ..++++++.+|+.+++ .
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~---~--------- 176 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI---S--------- 176 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC---C---------
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccC---c---------
Confidence 34568999999999999988887 67789999999999999999987322 1357999999986521 1
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHH
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 697 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~ 697 (771)
...||+|++|+... ..+|+.+.+.|+|||.+++..... ...
T Consensus 177 ----------------------~~~fD~Vi~~~~~~---------------~~~l~~~~~~LkpgG~l~i~~~~~--~~~ 217 (275)
T 1yb2_A 177 ----------------------DQMYDAVIADIPDP---------------WNHVQKIASMMKPGSVATFYLPNF--DQS 217 (275)
T ss_dssp ----------------------SCCEEEEEECCSCG---------------GGSHHHHHHTEEEEEEEEEEESSH--HHH
T ss_pred ----------------------CCCccEEEEcCcCH---------------HHHHHHHHHHcCCCCEEEEEeCCH--HHH
Confidence 25799999954211 478999999999999999876432 233
Q ss_pred HHHHHHHHHh-cc
Q 004164 698 DMVISRMKMV-FN 709 (771)
Q Consensus 698 ~~v~~~l~~v-F~ 709 (771)
..+...+++. |.
T Consensus 218 ~~~~~~l~~~Gf~ 230 (275)
T 1yb2_A 218 EKTVLSLSASGMH 230 (275)
T ss_dssp HHHHHHSGGGTEE
T ss_pred HHHHHHHHHCCCe
Confidence 4455555543 44
No 324
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.64 E-value=1.3e-07 Score=96.00 Aligned_cols=143 Identities=15% Similarity=0.123 Sum_probs=95.1
Q ss_pred CCCcEEEEeccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
...+||++|+|+|.++..|...+ |..+|++||+++.+++.|++.... .++++++.+|+.+...-..
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~--~~~v~~~~~d~~~~~~~~~----------- 139 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE--RRNIVPILGDATKPEEYRA----------- 139 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS--CTTEEEEECCTTCGGGGTT-----------
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc--cCCCEEEEccCCCcchhhc-----------
Confidence 45689999999999999998875 557999999999999998887753 2689999999865311000
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCC----h-
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS----Q- 694 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~----~- 694 (771)
....||+|++|.... -....+++.+.+.|+|||.+++-+.... .
T Consensus 140 -------------------~~~~~D~v~~~~~~~------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~ 188 (227)
T 1g8a_A 140 -------------------LVPKVDVIFEDVAQP------------TQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKE 188 (227)
T ss_dssp -------------------TCCCEEEEEECCCST------------THHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSC
T ss_pred -------------------ccCCceEEEECCCCH------------hHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCC
Confidence 024799999865311 0123569999999999999998642221 1
Q ss_pred --hHHHHHHHHHHHhccceEEeeecC--CccEEEEEe
Q 004164 695 --ATKDMVISRMKMVFNHLFCLQLEE--DVNLVLFGL 727 (771)
Q Consensus 695 --~~~~~v~~~l~~vF~~v~~~~~~~--~~N~Vl~a~ 727 (771)
......+..+.+.|..+....+.. ..+.++++.
T Consensus 189 ~~~~~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~ 225 (227)
T 1g8a_A 189 PEQVFREVERELSEYFEVIERLNLEPYEKDHALFVVR 225 (227)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEECTTTSSSEEEEEEE
T ss_pred hhhhhHHHHHHHHhhceeeeEeccCcccCCCEEEEEE
Confidence 111223444455576655555432 234455554
No 325
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.64 E-value=5.9e-10 Score=115.39 Aligned_cols=116 Identities=14% Similarity=0.178 Sum_probs=82.5
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCC
Q 004164 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQF 130 (771)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~ 130 (771)
..+...+.+.+.. .++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.++++.. ..++++++++|+.++++
T Consensus 15 ~~~~~~i~~~~~~---~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~~~~~~ 89 (245)
T 1yub_A 15 EKVLNQIIKQLNL---KETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDILQFQF 89 (245)
T ss_dssp TTTHHHHHHHCCC---CSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCCTTTTC
T ss_pred HHHHHHHHHhcCC---CCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhc-cCCceEEEECChhhcCc
Confidence 3445556666653 577899999999999999999987 599999999999886655443 34579999999999887
Q ss_pred CC-CCccEEEeccccccccCcccchHHHH----------HHH----HHHHHccccCeEEEEEE
Q 004164 131 MD-ETFDVILDKGGLDALMEPELGHKLGN----------QYL----SEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 131 ~~-~sFDlVi~~~~l~~l~~~~~~~~~~~----------~~l----~~i~rvLkpGG~~ii~~ 178 (771)
++ ++| .|+++-..+. ... ... .++ +.+.|+|+|||.+.++.
T Consensus 90 ~~~~~f-~vv~n~Py~~-~~~-----~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 90 PNKQRY-KIVGNIPYHL-STQ-----IIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp CCSSEE-EEEEECCSSS-CHH-----HHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred ccCCCc-EEEEeCCccc-cHH-----HHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 64 688 6665432221 100 011 223 66889999999876643
No 326
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.63 E-value=8.1e-08 Score=99.11 Aligned_cols=104 Identities=18% Similarity=0.226 Sum_probs=82.1
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
..+.+||+||+|+|.++..+...+|..++++||+++.+++.|++.. ++++++++|+.++. .
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~---~----------- 92 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL-----PNTNFGKADLATWK---P----------- 92 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS-----TTSEEEECCTTTCC---C-----------
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-----CCcEEEECChhhcC---c-----------
Confidence 3457899999999999999999888889999999999999999882 46899999976531 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
...||+|+... . ...+ + --..+|+.+++.|+|||.+++.....
T Consensus 93 --------------------~~~fD~v~~~~--~--l~~~--~----~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 93 --------------------AQKADLLYANA--V--FQWV--P----DHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp --------------------SSCEEEEEEES--C--GGGS--T----THHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred --------------------cCCcCEEEEeC--c--hhhC--C----CHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 35799999832 1 0001 0 12679999999999999999987644
No 327
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.62 E-value=3.9e-08 Score=98.43 Aligned_cols=109 Identities=15% Similarity=0.123 Sum_probs=80.2
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCC--CCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ--DKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 542 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~--~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
..+||++|+|+|.++..+.... ..+|++||+|+.+++.|++.+.... +++++++.+|+.+++....
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~----------- 121 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQ----------- 121 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCC-----------
T ss_pred CCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhc-----------
Confidence 4689999999999988766553 2589999999999999999873211 1579999999998754321
Q ss_pred cccccccCCCCCCCCCCCCCCCc-eeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHH--HHccCCCcEEEEEeccCC
Q 004164 620 HGNEITSNNTRSCNGNCTASNAR-VDILIIDVDSPDSSSGMTCPAADFVEGSFLLTV--KDALSEQGLFIVNLVSRS 693 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~-yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~--~~~L~~~Gilv~Nl~~~~ 693 (771)
... ||+|++|.. . ..-...++++.+ .+.|+|||++++......
T Consensus 122 --------------------~~~~fD~I~~~~~---~--------~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 122 --------------------NQPHFDVVFLDPP---F--------HFNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp --------------------SSCCEEEEEECCC---S--------SSCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred --------------------cCCCCCEEEECCC---C--------CCccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 257 999999532 0 001235778888 557999999998775544
No 328
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.62 E-value=1.1e-07 Score=95.70 Aligned_cols=105 Identities=13% Similarity=0.095 Sum_probs=79.5
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCC-----CCCeeEEEcchHHHHHhhccCCcccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ-----DKSLKVHITDGIKFVREMKSSSATDE 615 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~-----~~r~~v~i~Dg~~~l~~~~~~~~~~~ 615 (771)
.+.+||+||+|+|.++..|....+..++++||+++.+++.|++.+.... ..+++++.+|... ..
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~----~~------- 97 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTY----QD------- 97 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTS----CC-------
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccc----cc-------
Confidence 4579999999999999999998887899999999999999999874221 1379999999621 11
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCccc---HHHHHHHHHccCCCcEEEEEe
Q 004164 616 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~---~~fl~~~~~~L~~~Gilv~Nl 689 (771)
....+||+|++.- . -..+-. ..+|+.+++.|+|||++++..
T Consensus 98 ----------------------~~~~~fD~v~~~~--~---------l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 98 ----------------------KRFHGYDAATVIE--V---------IEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp ----------------------GGGCSCSEEEEES--C---------GGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred ----------------------ccCCCcCEEeeHH--H---------HHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 0125799999721 1 111221 579999999999999888654
No 329
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.62 E-value=1.5e-07 Score=101.16 Aligned_cols=132 Identities=15% Similarity=0.171 Sum_probs=95.7
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 615 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~ 615 (771)
....+||++|+|.|..+..|...++ ..+|++||+++.+++.|++.+ |+ ++++++.+|+.++.. .
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~---~~v~~~~~D~~~~~~-~-------- 184 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV---LNVILFHSSSLHIGE-L-------- 184 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC---CSEEEESSCGGGGGG-G--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC---CeEEEEECChhhccc-c--------
Confidence 3456899999999999999998875 479999999999999999987 55 359999999987522 1
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCc--------------ccHHHHHHHHHccCC
Q 004164 616 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF--------------VEGSFLLTVKDALSE 681 (771)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f--------------~~~~fl~~~~~~L~~ 681 (771)
...||+|++|+-.+. .|+.-..+.. ....+|+.+.+.|+|
T Consensus 185 ------------------------~~~fD~Il~d~Pcsg--~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~Lkp 238 (315)
T 1ixk_A 185 ------------------------NVEFDKILLDAPCTG--SGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKP 238 (315)
T ss_dssp ------------------------CCCEEEEEEECCTTS--TTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred ------------------------cccCCEEEEeCCCCC--cccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 246999999874321 1221111111 125899999999999
Q ss_pred CcEEEEEeccCChhHHHHHHHHHHHhcc
Q 004164 682 QGLFIVNLVSRSQATKDMVISRMKMVFN 709 (771)
Q Consensus 682 ~Gilv~Nl~~~~~~~~~~v~~~l~~vF~ 709 (771)
||.|++...+..+...+.++..+.+-+.
T Consensus 239 GG~lv~stcs~~~~Ene~~v~~~l~~~~ 266 (315)
T 1ixk_A 239 GGILVYSTCSLEPEENEFVIQWALDNFD 266 (315)
T ss_dssp EEEEEEEESCCCGGGTHHHHHHHHHHSS
T ss_pred CCEEEEEeCCCChHHhHHHHHHHHhcCC
Confidence 9999998766666655666666544443
No 330
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.61 E-value=1.1e-07 Score=101.16 Aligned_cols=112 Identities=13% Similarity=0.102 Sum_probs=84.8
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
....+||+||+|.|.++..+...++ .+|++||+++.+++.|++.+ |+ .++++++.+|..++ .
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~----~-------- 135 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDS--PRRKEVRIQGWEEF----D-------- 135 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCC--SSCEEEEECCGGGC----C--------
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCC--CCceEEEECCHHHc----C--------
Confidence 3456899999999999999998876 69999999999999999987 43 45899999999764 2
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCC---cCcccHHHHHHHHHccCCCcEEEEEeccCC
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPA---ADFVEGSFLLTVKDALSEQGLFIVNLVSRS 693 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp---~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 693 (771)
..||+|+... ....+..|. ..-.-..+|+.+.+.|+|||.+++..+...
T Consensus 136 ------------------------~~fD~v~~~~----~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 136 ------------------------EPVDRIVSLG----AFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp ------------------------CCCSEEEEES----CGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred ------------------------CCccEEEEcc----hHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 5699999731 101111010 001126899999999999999999887654
Q ss_pred h
Q 004164 694 Q 694 (771)
Q Consensus 694 ~ 694 (771)
.
T Consensus 188 ~ 188 (302)
T 3hem_A 188 D 188 (302)
T ss_dssp C
T ss_pred C
Confidence 3
No 331
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.60 E-value=1.7e-07 Score=105.36 Aligned_cols=133 Identities=14% Similarity=0.114 Sum_probs=101.7
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCC-CcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPF-VGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 615 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~-~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~ 615 (771)
....+||++|+|.|..+..|...++. .+|++||+++..++.+++.. |+ .++.++.+|+.++.....
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~---~nv~v~~~Da~~l~~~~~------- 173 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV---SNAIVTNHAPAELVPHFS------- 173 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC---SSEEEECCCHHHHHHHHT-------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CceEEEeCCHHHhhhhcc-------
Confidence 34578999999999999988887654 69999999999999999875 65 359999999998865432
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCc--------------ccHHHHHHHHHccCC
Q 004164 616 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF--------------VEGSFLLTVKDALSE 681 (771)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f--------------~~~~fl~~~~~~L~~ 681 (771)
..||+|++|+-.+. .|+....+.. +..++|+.+.+.|+|
T Consensus 174 -------------------------~~FD~Il~DaPCSg--~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp 226 (456)
T 3m4x_A 174 -------------------------GFFDRIVVDAPCSG--EGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKN 226 (456)
T ss_dssp -------------------------TCEEEEEEECCCCC--GGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEE
T ss_pred -------------------------ccCCEEEECCCCCC--ccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 57999999984331 1221111111 234889999999999
Q ss_pred CcEEEEEeccCChhHHHHHHHHHHHhcc
Q 004164 682 QGLFIVNLVSRSQATKDMVISRMKMVFN 709 (771)
Q Consensus 682 ~Gilv~Nl~~~~~~~~~~v~~~l~~vF~ 709 (771)
||.|++...+..++..+.++..+.+-++
T Consensus 227 GG~LvYsTCs~~~eEne~vv~~~l~~~~ 254 (456)
T 3m4x_A 227 KGQLIYSTCTFAPEENEEIISWLVENYP 254 (456)
T ss_dssp EEEEEEEESCCCGGGTHHHHHHHHHHSS
T ss_pred CcEEEEEEeecccccCHHHHHHHHHhCC
Confidence 9999999888877777778877776665
No 332
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.60 E-value=1.8e-07 Score=95.83 Aligned_cols=105 Identities=13% Similarity=0.191 Sum_probs=81.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
....+||+||+|.|.++..+... ..+|++||+++.+++.|++. ++++.+|+.+++....
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~~~----------- 98 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKSLP----------- 98 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHTSC-----------
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh--------cceeeccHHHHhhhcC-----------
Confidence 34578999999999999988887 35899999999999999876 7889999999875543
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCC
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 693 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 693 (771)
+.+||+|++.- . ...+ +.+. -..+|+.+++.|+|||.+++......
T Consensus 99 --------------------~~~fD~i~~~~--~--l~~~--~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~ 144 (240)
T 3dli_A 99 --------------------DKYLDGVMISH--F--VEHL--DPER--LFELLSLCYSKMKYSSYIVIESPNPT 144 (240)
T ss_dssp --------------------TTCBSEEEEES--C--GGGS--CGGG--HHHHHHHHHHHBCTTCCEEEEEECTT
T ss_pred --------------------CCCeeEEEECC--c--hhhC--CcHH--HHHHHHHHHHHcCCCcEEEEEeCCcc
Confidence 36799999821 1 0001 1111 16899999999999999999876543
No 333
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.60 E-value=1e-07 Score=103.17 Aligned_cols=120 Identities=15% Similarity=0.189 Sum_probs=86.9
Q ss_pred CCCCcEEEEeccccHHHHHHHHh-CCCCcEEEEEcCHHHHHHHHhhcC-------CC----CCCCeeEEEcchHHHHHhh
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYFG-------FT----QDKSLKVHITDGIKFVREM 607 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~-~p~~~i~~VEiD~~v~~vA~~~Fg-------~~----~~~r~~v~i~Dg~~~l~~~ 607 (771)
....+||+||+|+|.++..+... .|..+|++||++|.+++.|++.+. +. ..++++++.+|+.+.+...
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 34568999999999999998887 466799999999999999999863 11 1357999999997653222
Q ss_pred ccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEE
Q 004164 608 KSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIV 687 (771)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~ 687 (771)
. ...||+|++|.... ..++..+.+.|+|||.|++
T Consensus 184 ~-------------------------------~~~fD~V~~~~~~~---------------~~~l~~~~~~LkpgG~lv~ 217 (336)
T 2b25_A 184 K-------------------------------SLTFDAVALDMLNP---------------HVTLPVFYPHLKHGGVCAV 217 (336)
T ss_dssp -----------------------------------EEEEEECSSST---------------TTTHHHHGGGEEEEEEEEE
T ss_pred C-------------------------------CCCeeEEEECCCCH---------------HHHHHHHHHhcCCCcEEEE
Confidence 2 24699999965221 1278999999999999997
Q ss_pred EeccCChhHHHHHHHHHHHh
Q 004164 688 NLVSRSQATKDMVISRMKMV 707 (771)
Q Consensus 688 Nl~~~~~~~~~~v~~~l~~v 707 (771)
-.. .......++..+++.
T Consensus 218 ~~~--~~~~~~~~~~~l~~~ 235 (336)
T 2b25_A 218 YVV--NITQVIELLDGIRTC 235 (336)
T ss_dssp EES--SHHHHHHHHHHHHHH
T ss_pred EeC--CHHHHHHHHHHHHhc
Confidence 653 344444556666653
No 334
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.60 E-value=2.8e-07 Score=95.90 Aligned_cols=85 Identities=11% Similarity=0.212 Sum_probs=69.4
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCC
Q 004164 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQF 130 (771)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~ 130 (771)
+.+...+.+.+.. .++.+|||||||+|.++..|++.+. +|+++|+++.+++.++++... .++++++++|+.++++
T Consensus 15 ~~i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~~La~~~~-~V~avEid~~~~~~~~~~~~~-~~~v~~i~~D~~~~~~ 89 (255)
T 3tqs_A 15 SFVLQKIVSAIHP---QKTDTLVEIGPGRGALTDYLLTECD-NLALVEIDRDLVAFLQKKYNQ-QKNITIYQNDALQFDF 89 (255)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEECCTTTTTHHHHTTTSS-EEEEEECCHHHHHHHHHHHTT-CTTEEEEESCTTTCCG
T ss_pred HHHHHHHHHhcCC---CCcCEEEEEcccccHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHhh-CCCcEEEEcchHhCCH
Confidence 4556667777764 5788999999999999999999874 999999999999988777643 5789999999999876
Q ss_pred CC----CCccEEEec
Q 004164 131 MD----ETFDVILDK 141 (771)
Q Consensus 131 ~~----~sFDlVi~~ 141 (771)
++ ++|| |+++
T Consensus 90 ~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 90 SSVKTDKPLR-VVGN 103 (255)
T ss_dssp GGSCCSSCEE-EEEE
T ss_pred HHhccCCCeE-EEec
Confidence 53 5688 5544
No 335
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.60 E-value=7.2e-08 Score=96.53 Aligned_cols=106 Identities=13% Similarity=0.146 Sum_probs=79.1
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccccc
Q 004164 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHG 621 (771)
Q Consensus 542 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~ 621 (771)
..+||++|+|+|.++..+..... .+|++||+|+.+++.|++.+....-++++++.+|+.+++...
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~-------------- 119 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQK-------------- 119 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSC--------------
T ss_pred CCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhc--------------
Confidence 46899999999999887665542 489999999999999999872211157999999999986432
Q ss_pred cccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHH--ccCCCcEEEEEecc
Q 004164 622 NEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKD--ALSEQGLFIVNLVS 691 (771)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~--~L~~~Gilv~Nl~~ 691 (771)
..+||+|++|.. . ..-...++++.+.+ .|+|||++++....
T Consensus 120 ------------------~~~fD~V~~~~p---~--------~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 120 ------------------GTPHNIVFVDPP---F--------RRGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp ------------------CCCEEEEEECCS---S--------STTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred ------------------CCCCCEEEECCC---C--------CCCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 257999999532 0 00123567888876 49999999987644
No 336
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.60 E-value=1.7e-07 Score=96.60 Aligned_cols=104 Identities=14% Similarity=0.125 Sum_probs=81.9
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
....+||+||+|.|.++..+....+. +|++||+++.+++.|++.+ |+ .++++++.+|+.++ .
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~----~-------- 109 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANC--ADRVKGITGSMDNL----P-------- 109 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSC----S--------
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECChhhC----C--------
Confidence 34568999999999999999999875 9999999999999999886 43 46799999998442 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEec
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 690 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 690 (771)
.....||+|+...-- .++--..+|+.+++.|+|||.+++...
T Consensus 110 ---------------------~~~~~fD~v~~~~~l-----------~~~~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 110 ---------------------FQNEELDLIWSEGAI-----------YNIGFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp ---------------------SCTTCEEEEEEESCS-----------CCCCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ---------------------CCCCCEEEEEecChH-----------hhcCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 113679999984211 111237899999999999999998753
No 337
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.59 E-value=8.3e-08 Score=99.77 Aligned_cols=106 Identities=8% Similarity=0.030 Sum_probs=78.2
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-----------------CCCCCeeEEEcchHHH
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-----------------TQDKSLKVHITDGIKF 603 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~-----------------~~~~r~~v~i~Dg~~~ 603 (771)
...+||++|+|+|..+.+|.... .+|++||+++.+++.|++..+. ....+++++++|..+.
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G--~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRG--HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTT--CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCCcHHHHHHHHCC--CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 45789999999999999998873 5899999999999999887653 1246899999998764
Q ss_pred HHhhccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCc
Q 004164 604 VREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQG 683 (771)
Q Consensus 604 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~G 683 (771)
-.. ...+||+|+. . .....+ |++ ....+++.+.+.|+|||
T Consensus 146 ~~~--------------------------------~~~~FD~V~~-~---~~l~~l--~~~--~~~~~l~~~~~~LkpGG 185 (252)
T 2gb4_A 146 PRA--------------------------------NIGKFDRIWD-R---GALVAI--NPG--DHDRYADIILSLLRKEF 185 (252)
T ss_dssp GGG--------------------------------CCCCEEEEEE-S---SSTTTS--CGG--GHHHHHHHHHHTEEEEE
T ss_pred Ccc--------------------------------cCCCEEEEEE-h---hhhhhC--CHH--HHHHHHHHHHHHcCCCe
Confidence 111 0157999985 1 111112 221 23579999999999999
Q ss_pred EEEEE
Q 004164 684 LFIVN 688 (771)
Q Consensus 684 ilv~N 688 (771)
.|++-
T Consensus 186 ~l~l~ 190 (252)
T 2gb4_A 186 QYLVA 190 (252)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99643
No 338
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.59 E-value=1.7e-07 Score=99.86 Aligned_cols=108 Identities=14% Similarity=0.103 Sum_probs=82.1
Q ss_pred CCCCcEEEEeccccHHHHHHH-HhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLH-ECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~-~~~p~~~i~~VEiD~~v~~vA~~~Fg~~-~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
....+||+||+|+|.++..+. ...|..+|++||+++.+++.|++.+.-. ..++++++.+|+.+. .
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~--------- 183 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKL----D--------- 183 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGC----C---------
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcC----C---------
Confidence 456789999999999988874 5668889999999999999999988421 245799999998763 1
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCccc----HHHHHHHHHccCCCcEEEEEeccC
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE----GSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~----~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
. ...||+|++.. . -..+-+ ..+|+.+++.|+|||.|++..+.+
T Consensus 184 --------------------~-~~~fD~v~~~~--~---------~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 184 --------------------T-REGYDLLTSNG--L---------NIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp --------------------C-CSCEEEEECCS--S---------GGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred --------------------c-cCCeEEEEECC--h---------hhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 1 15799999721 1 111112 247999999999999999887543
No 339
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.59 E-value=1.3e-07 Score=98.48 Aligned_cols=104 Identities=13% Similarity=0.091 Sum_probs=82.1
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
..+.+||+||+|.|.++..+... +..+|++||+++.+++.|++.+ |+ .++++++.+|..++ .
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~----~-------- 109 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGL--QNRVTGIVGSMDDL----P-------- 109 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSC----C--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCC--CcCcEEEEcChhhC----C--------
Confidence 45679999999999999999888 7779999999999999999887 43 46799999998543 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEec
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 690 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 690 (771)
....+||+|++.. . -..+--..+|+.+++.|+|||.+++...
T Consensus 110 ---------------------~~~~~fD~i~~~~--~---------~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 110 ---------------------FRNEELDLIWSEG--A---------IYNIGFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp ---------------------CCTTCEEEEEESS--C---------GGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ---------------------CCCCCEEEEEEcC--C---------ceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 1136799999821 1 1111237899999999999999998754
No 340
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.58 E-value=1.2e-07 Score=98.95 Aligned_cols=101 Identities=16% Similarity=0.119 Sum_probs=77.5
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
+...+||+||+|+|.++..|...+ .+|++||+++.|++.|+++ ++++++++|+.+. .
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~~------~~v~~~~~~~e~~----~----------- 94 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALRH------PRVTYAVAPAEDT----G----------- 94 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCCC------TTEEEEECCTTCC----C-----------
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhhc------CCceeehhhhhhh----c-----------
Confidence 445789999999999999998876 5899999999999998753 5799999997542 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
..+..||+|++ .... ..+-.+.+|..+++.|+|||+|++-....
T Consensus 95 ------------------~~~~sfD~v~~----~~~~-------h~~~~~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 95 ------------------LPPASVDVAIA----AQAM-------HWFDLDRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp ------------------CCSSCEEEEEE----CSCC-------TTCCHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred ------------------ccCCcccEEEE----eeeh-------hHhhHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 12478999998 1111 11223679999999999999998755443
No 341
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.58 E-value=1.8e-07 Score=98.25 Aligned_cols=117 Identities=19% Similarity=0.253 Sum_probs=89.3
Q ss_pred CCCCcEEEEeccccHHHHHHHHh-CCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 615 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~-~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~ 615 (771)
....+||++|+|.|.++..+... .|..+|++||+++.+++.|++.+ ++ .++++++.+|..++ ..
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~---~~------- 178 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL--IERVTIKVRDISEG---FD------- 178 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC--GGGEEEECCCGGGC---CS-------
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC--CCCEEEEECCHHHc---cc-------
Confidence 34568999999999999999888 56789999999999999999987 43 35799999998764 11
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChh
Q 004164 616 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQA 695 (771)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~ 695 (771)
...||+|++|... | ..+++.+.+.|+|||.+++...+. .
T Consensus 179 ------------------------~~~~D~V~~~~~~---------~------~~~l~~~~~~L~pgG~l~~~~~~~--~ 217 (277)
T 1o54_A 179 ------------------------EKDVDALFLDVPD---------P------WNYIDKCWEALKGGGRFATVCPTT--N 217 (277)
T ss_dssp ------------------------CCSEEEEEECCSC---------G------GGTHHHHHHHEEEEEEEEEEESSH--H
T ss_pred ------------------------CCccCEEEECCcC---------H------HHHHHHHHHHcCCCCEEEEEeCCH--H
Confidence 2469999995421 1 478999999999999999876432 2
Q ss_pred HHHHHHHHHHHh-cc
Q 004164 696 TKDMVISRMKMV-FN 709 (771)
Q Consensus 696 ~~~~v~~~l~~v-F~ 709 (771)
....+...|++. |.
T Consensus 218 ~~~~~~~~l~~~gf~ 232 (277)
T 1o54_A 218 QVQETLKKLQELPFI 232 (277)
T ss_dssp HHHHHHHHHHHSSEE
T ss_pred HHHHHHHHHHHCCCc
Confidence 334556666653 44
No 342
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.58 E-value=3.8e-07 Score=91.48 Aligned_cols=128 Identities=13% Similarity=0.128 Sum_probs=93.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
....+||+||+|+|.++..|.... .+|++||+++.+++.|++.+.- .++++++.+|..++.
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~--------------- 110 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKR--WSHISWAATDILQFS--------------- 110 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTT--CSSEEEEECCTTTCC---------------
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhccc--CCCeEEEEcchhhCC---------------
Confidence 445789999999999999998875 5899999999999999999853 348999999986642
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCccc----HHHHHHHHHccCCCcEEEEEeccC---
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE----GSFLLTVKDALSEQGLFIVNLVSR--- 692 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~----~~fl~~~~~~L~~~Gilv~Nl~~~--- 692 (771)
...+||+|++.- . -.++-+ ..+|+.+.+.|+|||.|++.....
T Consensus 111 -------------------~~~~fD~v~~~~--~---------l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 160 (216)
T 3ofk_A 111 -------------------TAELFDLIVVAE--V---------LYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARDATC 160 (216)
T ss_dssp -------------------CSCCEEEEEEES--C---------GGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHH
T ss_pred -------------------CCCCccEEEEcc--H---------HHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCCCcc
Confidence 136799999831 1 112222 467999999999999999865221
Q ss_pred ----ChhHHHHHHHHHHHhccceEEeee
Q 004164 693 ----SQATKDMVISRMKMVFNHLFCLQL 716 (771)
Q Consensus 693 ----~~~~~~~v~~~l~~vF~~v~~~~~ 716 (771)
.....+.+...+.+.|..+-.+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 188 (216)
T 3ofk_A 161 RRWGHVAGAETVITILTEALTEVERVQC 188 (216)
T ss_dssp HHTTCSCCHHHHHHHHHHHSEEEEEEEE
T ss_pred hhhhhhhhHHHHHHHHHhhccceEEEec
Confidence 112234556677777776544443
No 343
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.58 E-value=7.9e-08 Score=96.33 Aligned_cols=104 Identities=9% Similarity=0.020 Sum_probs=75.1
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC------------CCCCeeEEEcchHHHHHhhc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT------------QDKSLKVHITDGIKFVREMK 608 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~------------~~~r~~v~i~Dg~~~l~~~~ 608 (771)
...+||++|+|+|..+.+|.... .+|++||+++.|++.|++..+.. ...+++++++|..+.-...
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g--~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~- 98 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQG--YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD- 98 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHC--CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH-
T ss_pred CCCEEEEeCCCCcHhHHHHHHCC--CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc-
Confidence 45789999999999999998873 59999999999999999986541 1357999999987642110
Q ss_pred cCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEE
Q 004164 609 SSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFI 686 (771)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv 686 (771)
..+||+|+.-. . ...+ |++ ....+++.+++.|+|||.++
T Consensus 99 -------------------------------~~~fD~v~~~~--~--l~~l--~~~--~~~~~l~~~~r~LkpgG~~~ 137 (203)
T 1pjz_A 99 -------------------------------IGHCAAFYDRA--A--MIAL--PAD--MRERYVQHLEALMPQACSGL 137 (203)
T ss_dssp -------------------------------HHSEEEEEEES--C--GGGS--CHH--HHHHHHHHHHHHSCSEEEEE
T ss_pred -------------------------------CCCEEEEEECc--c--hhhC--CHH--HHHHHHHHHHHHcCCCcEEE
Confidence 04699998511 1 0001 111 12468999999999999733
No 344
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.58 E-value=1.4e-07 Score=94.80 Aligned_cols=147 Identities=12% Similarity=0.121 Sum_probs=100.3
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
....+||+||+|.|.++..+.... |..++++||+++.+++.|++.+.-..-++++++.+|+.++ .
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~---------- 101 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKI----P---------- 101 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBC----S----------
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccC----C----------
Confidence 345789999999999988888876 7779999999999999999987211123799999997543 1
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChh---
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQA--- 695 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~--- 695 (771)
....+||+|++...-. .+ + -...+|+.+.+.|+|||.+++..+.....
T Consensus 102 -------------------~~~~~fD~v~~~~~l~----~~----~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~ 152 (219)
T 3dh0_A 102 -------------------LPDNTVDFIFMAFTFH----EL----S--EPLKFLEELKRVAKPFAYLAIIDWKKEERDKG 152 (219)
T ss_dssp -------------------SCSSCEEEEEEESCGG----GC----S--SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSS
T ss_pred -------------------CCCCCeeEEEeehhhh----hc----C--CHHHHHHHHHHHhCCCeEEEEEEecccccccC
Confidence 1136799999842110 01 0 12789999999999999999865433210
Q ss_pred -------HHHHHHHHHHHh-ccceEEeeecCCccEEEEEecCC
Q 004164 696 -------TKDMVISRMKMV-FNHLFCLQLEEDVNLVLFGLSSE 730 (771)
Q Consensus 696 -------~~~~v~~~l~~v-F~~v~~~~~~~~~N~Vl~a~~~~ 730 (771)
..+.+...+++. |..+-..... ....++++.+..
T Consensus 153 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~-~~~~~~~~~k~~ 194 (219)
T 3dh0_A 153 PPPEEVYSEWEVGLILEDAGIRVGRVVEVG-KYCFGVYAMIVK 194 (219)
T ss_dssp CCGGGSCCHHHHHHHHHHTTCEEEEEEEET-TTEEEEEEECC-
T ss_pred CchhcccCHHHHHHHHHHCCCEEEEEEeeC-CceEEEEEEecc
Confidence 134556666665 6655544433 345666666543
No 345
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.58 E-value=5.5e-07 Score=89.43 Aligned_cols=140 Identities=15% Similarity=0.054 Sum_probs=96.1
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccccc
Q 004164 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHG 621 (771)
Q Consensus 542 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~ 621 (771)
..+||+||+|.|.++..|... ..++++||+++.+++.|++.+ ++++++.+|+.++ ...
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~--~~~------------- 99 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTH-----PSVTFHHGTITDL--SDS------------- 99 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHC-----TTSEEECCCGGGG--GGS-------------
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC-----CCCeEEeCccccc--ccC-------------
Confidence 578999999999999988887 358999999999999999985 3689999998764 111
Q ss_pred cccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCCh-------
Q 004164 622 NEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQ------- 694 (771)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~------- 694 (771)
+.+||+|++.. . ...+ |+. --..+|+.+++.|+|||.+++.......
T Consensus 100 ------------------~~~fD~v~~~~--~--l~~~--~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~ 153 (203)
T 3h2b_A 100 ------------------PKRWAGLLAWY--S--LIHM--GPG--ELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHP 153 (203)
T ss_dssp ------------------CCCEEEEEEES--S--STTC--CTT--THHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCS
T ss_pred ------------------CCCeEEEEehh--h--HhcC--CHH--HHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhch
Confidence 36799999832 1 0001 111 1278999999999999999988755432
Q ss_pred ------hHHHHHHHHHHHh-ccceEEeeecCCccEEEEEecC
Q 004164 695 ------ATKDMVISRMKMV-FNHLFCLQLEEDVNLVLFGLSS 729 (771)
Q Consensus 695 ------~~~~~v~~~l~~v-F~~v~~~~~~~~~N~Vl~a~~~ 729 (771)
...+.+...+++. |.-+............+...+.
T Consensus 154 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~p~~~l~~~~~ 195 (203)
T 3h2b_A 154 VATAYRWPLPELAQALETAGFQVTSSHWDPRFPHAYLTAEAS 195 (203)
T ss_dssp SSCEEECCHHHHHHHHHHTTEEEEEEEECTTSSEEEEEEEEC
T ss_pred hhhhccCCHHHHHHHHHHCCCcEEEEEecCCCcchhhhhhhh
Confidence 1134555666655 5544443333334444444443
No 346
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.57 E-value=1.5e-07 Score=93.97 Aligned_cols=121 Identities=15% Similarity=0.181 Sum_probs=87.8
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
....+||+||+|+|.++..+... +..+|++||+++.+++.|++.+....-+.++++.+|..++.
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--------------- 122 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV--------------- 122 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC---------------
T ss_pred cCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC---------------
Confidence 34578999999999999988875 66799999999999999999873211123999999986531
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHHHH
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDM 699 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~ 699 (771)
..+||+|+.+.. ... -..+++.+.+.|+|||.+++..+... ....
T Consensus 123 --------------------~~~fD~i~~~~~-----------~~~--~~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~ 167 (205)
T 3grz_A 123 --------------------DGKFDLIVANIL-----------AEI--LLDLIPQLDSHLNEDGQVIFSGIDYL--QLPK 167 (205)
T ss_dssp --------------------CSCEEEEEEESC-----------HHH--HHHHGGGSGGGEEEEEEEEEEEEEGG--GHHH
T ss_pred --------------------CCCceEEEECCc-----------HHH--HHHHHHHHHHhcCCCCEEEEEecCcc--cHHH
Confidence 257999999531 111 26889999999999999998644332 2334
Q ss_pred HHHHHHHh-ccce
Q 004164 700 VISRMKMV-FNHL 711 (771)
Q Consensus 700 v~~~l~~v-F~~v 711 (771)
+...+++. |..+
T Consensus 168 ~~~~~~~~Gf~~~ 180 (205)
T 3grz_A 168 IEQALAENSFQID 180 (205)
T ss_dssp HHHHHHHTTEEEE
T ss_pred HHHHHHHcCCceE
Confidence 55556554 5443
No 347
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.57 E-value=1e-07 Score=96.08 Aligned_cols=106 Identities=16% Similarity=0.173 Sum_probs=79.7
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCC-----CCCeeEEEcchHHHHHhhccCCccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ-----DKSLKVHITDGIKFVREMKSSSATD 614 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~-----~~r~~v~i~Dg~~~l~~~~~~~~~~ 614 (771)
..+.+||+||+|+|.++..+....|..++++||+++.+++.|++.+.... .++++++.+|... ..
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~----~~------ 97 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVY----RD------ 97 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSS----CC------
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccc----cc------
Confidence 34579999999999999999998887899999999999999999874211 1279999999621 11
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCccc---HHHHHHHHHccCCCcEEEEEe
Q 004164 615 EMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~---~~fl~~~~~~L~~~Gilv~Nl 689 (771)
....+||+|+..- . -..+-+ ..+|+.+++.|+|||+++...
T Consensus 98 -----------------------~~~~~fD~V~~~~--~---------l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 98 -----------------------KRFSGYDAATVIE--V---------IEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp -----------------------GGGTTCSEEEEES--C---------GGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred -----------------------cccCCCCEEEEHH--H---------HHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 0125799999721 1 122222 479999999999999887643
No 348
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.57 E-value=1.5e-07 Score=99.72 Aligned_cols=45 Identities=11% Similarity=0.183 Sum_probs=42.2
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF 585 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F 585 (771)
...+||+||+|.|.++..|...++..+|++||+|+.+++.|++..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~ 90 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNI 90 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHH
Confidence 467999999999999999999998889999999999999999986
No 349
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.57 E-value=4.2e-07 Score=91.73 Aligned_cols=140 Identities=15% Similarity=0.117 Sum_probs=89.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHH----HHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTML----NLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDE 615 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~----~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~ 615 (771)
....+||+||+|+|.++..|....+..+|++||++|.++ +.|++. +++.++++|+........
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~------~~v~~~~~d~~~~~~~~~------- 122 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER------NNIIPLLFDASKPWKYSG------- 122 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC------SSEEEECSCTTCGGGTTT-------
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC------CCeEEEEcCCCCchhhcc-------
Confidence 345689999999999999999888766999999999765 445432 357888888754210000
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC---
Q 004164 616 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR--- 692 (771)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~--- 692 (771)
. ...||+|++|+.. + -....+++.+++.|+|||.|++.+-.+
T Consensus 123 ----------------------~-~~~fD~V~~~~~~----------~--~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~ 167 (210)
T 1nt2_A 123 ----------------------I-VEKVDLIYQDIAQ----------K--NQIEILKANAEFFLKEKGEVVIMVKARSID 167 (210)
T ss_dssp ----------------------T-CCCEEEEEECCCS----------T--THHHHHHHHHHHHEEEEEEEEEEEEHHHHC
T ss_pred ----------------------c-ccceeEEEEeccC----------h--hHHHHHHHHHHHHhCCCCEEEEEEecCCcc
Confidence 0 2579999997411 1 112346899999999999999875221
Q ss_pred ---Ch-hHHHHHHHHHHHhccceEEeeecC--CccEEEEEe
Q 004164 693 ---SQ-ATKDMVISRMKMVFNHLFCLQLEE--DVNLVLFGL 727 (771)
Q Consensus 693 ---~~-~~~~~v~~~l~~vF~~v~~~~~~~--~~N~Vl~a~ 727 (771)
+. +.....++.|++.|.-+-...... ..+.++++.
T Consensus 168 ~~~~~~~~~~~~~~~l~~~f~~~~~~~~~p~~~~h~~~~~~ 208 (210)
T 1nt2_A 168 STAEPEEVFKSVLKEMEGDFKIVKHGSLMPYHRDHIFIHAY 208 (210)
T ss_dssp TTSCHHHHHHHHHHHHHTTSEEEEEEECTTTCTTEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhhcEEeeeecCCCCCCCcEEEEEE
Confidence 11 112123455676676544444322 234555554
No 350
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.56 E-value=9e-08 Score=100.03 Aligned_cols=107 Identities=16% Similarity=0.150 Sum_probs=82.9
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
....+||+||+|+|.++..+...+|..++++||+++.+++.|++.+.-..-++++++.+|..+. .
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~----------- 100 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSL----P----------- 100 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGC----C-----------
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccC----C-----------
Confidence 4567999999999999999999998899999999999999999987322224699999998753 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEe
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 689 (771)
....+||+|++...-. .+ | -...+|+.+++.|+|||.+++..
T Consensus 101 ------------------~~~~~fD~v~~~~~l~----~~--~----~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 101 ------------------FEDSSFDHIFVCFVLE----HL--Q----SPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp ------------------SCTTCEEEEEEESCGG----GC--S----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------CCCCCeeEEEEechhh----hc--C----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 1136799999832110 01 0 12589999999999999999854
No 351
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.56 E-value=3e-07 Score=101.12 Aligned_cols=105 Identities=15% Similarity=0.171 Sum_probs=81.3
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
...+||+|| |+|.++..+....|..+|++||+||.++++|++++ |+ + +++++.+|+.+++...
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~--~-~v~~~~~D~~~~l~~~---------- 237 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY--E-DIEIFTFDLRKPLPDY---------- 237 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC--C-CEEEECCCTTSCCCTT----------
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--C-CEEEEEChhhhhchhh----------
Confidence 357899999 99999999988877679999999999999999987 55 2 7999999997643210
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCc-EEEEEecc
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQG-LFIVNLVS 691 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~G-ilv~Nl~~ 691 (771)
....||+|++|. + . .+.. ...||+.+.+.|+||| ++++.+..
T Consensus 238 ---------------------~~~~fD~Vi~~~--p--~-----~~~~--~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 238 ---------------------ALHKFDTFITDP--P--E-----TLEA--IRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp ---------------------TSSCBSEEEECC--C--S-----SHHH--HHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred ---------------------ccCCccEEEECC--C--C-----chHH--HHHHHHHHHHHcccCCeEEEEEEec
Confidence 024799999963 1 0 0112 3889999999999999 55666654
No 352
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.56 E-value=6.6e-07 Score=92.44 Aligned_cols=84 Identities=14% Similarity=0.233 Sum_probs=65.7
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCC
Q 004164 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFM 131 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~ 131 (771)
.+...+.+.+.. .++.+|||+|||+|.++..|++.+. +|+++|+++.+++.++++.. ..++++++++|+.+++++
T Consensus 17 ~~~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~l~~~~~-~v~~vD~~~~~~~~a~~~~~-~~~~v~~~~~D~~~~~~~ 91 (244)
T 1qam_A 17 HNIDKIMTNIRL---NEHDNIFEIGSGKGHFTLELVQRCN-FVTAIEIDHKLCKTTENKLV-DHDNFQVLNKDILQFKFP 91 (244)
T ss_dssp HHHHHHHTTCCC---CTTCEEEEECCTTSHHHHHHHHHSS-EEEEECSCHHHHHHHHHHTT-TCCSEEEECCCGGGCCCC
T ss_pred HHHHHHHHhCCC---CCCCEEEEEeCCchHHHHHHHHcCC-eEEEEECCHHHHHHHHHhhc-cCCCeEEEEChHHhCCcc
Confidence 444445555543 5788999999999999999999874 99999999999998877664 346899999999998876
Q ss_pred C-CCccEEEec
Q 004164 132 D-ETFDVILDK 141 (771)
Q Consensus 132 ~-~sFDlVi~~ 141 (771)
+ ..| .|+++
T Consensus 92 ~~~~~-~vv~n 101 (244)
T 1qam_A 92 KNQSY-KIFGN 101 (244)
T ss_dssp SSCCC-EEEEE
T ss_pred cCCCe-EEEEe
Confidence 4 455 45544
No 353
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.56 E-value=2e-07 Score=96.14 Aligned_cols=103 Identities=14% Similarity=0.099 Sum_probs=81.5
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||+||+|+|.++..+....+. ++++||+++.+++.|++.+. ..+++++.+|..++ .
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~----~------------ 103 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDI----A------------ 103 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGC----C------------
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhC----C------------
Confidence 5678999999999999999888654 89999999999999999986 57899999998643 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEec
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 690 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 690 (771)
....+||+|++.. . ...+ . --..+|+.+++.|+|||.|++.+.
T Consensus 104 -----------------~~~~~fD~v~~~~--~--l~~~----~--~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 104 -----------------IEPDAYNVVLSSL--A--LHYI----A--SFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp -----------------CCTTCEEEEEEES--C--GGGC----S--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -----------------CCCCCeEEEEEch--h--hhhh----h--hHHHHHHHHHHHcCCCcEEEEEeC
Confidence 1136799999832 1 1111 1 127899999999999999998753
No 354
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.56 E-value=2e-07 Score=95.62 Aligned_cols=117 Identities=18% Similarity=0.161 Sum_probs=87.0
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
...+||++|+|.|.++..+... ..+|++||+++.+++.|++.+ ++ +++++++.+|..+...
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~~------------ 154 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNL--GKNVKFFNVDFKDAEV------------ 154 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTC--CTTEEEECSCTTTSCC------------
T ss_pred CCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCC--CCcEEEEEcChhhccc------------
Confidence 4568999999999999888888 569999999999999999986 43 4678999898865310
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHH
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 697 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~ 697 (771)
....||+|+.|... ...+++.+.+.|+|||.+++...+. ...
T Consensus 155 ---------------------~~~~~D~v~~~~~~---------------~~~~l~~~~~~L~~gG~l~~~~~~~--~~~ 196 (248)
T 2yvl_A 155 ---------------------PEGIFHAAFVDVRE---------------PWHYLEKVHKSLMEGAPVGFLLPTA--NQV 196 (248)
T ss_dssp ---------------------CTTCBSEEEECSSC---------------GGGGHHHHHHHBCTTCEEEEEESSH--HHH
T ss_pred ---------------------CCCcccEEEECCcC---------------HHHHHHHHHHHcCCCCEEEEEeCCH--HHH
Confidence 12569999985321 1467899999999999999876432 333
Q ss_pred HHHHHHHHHhccce
Q 004164 698 DMVISRMKMVFNHL 711 (771)
Q Consensus 698 ~~v~~~l~~vF~~v 711 (771)
..+...+++.|..+
T Consensus 197 ~~~~~~l~~~f~~~ 210 (248)
T 2yvl_A 197 IKLLESIENYFGNL 210 (248)
T ss_dssp HHHHHHSTTTEEEE
T ss_pred HHHHHHHHhhCCcc
Confidence 44555555445543
No 355
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.55 E-value=1.1e-06 Score=85.07 Aligned_cols=114 Identities=9% Similarity=0.046 Sum_probs=86.8
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||+||+|.|.++..+.. +..++++||+++.+++.|++.+....-++++++.+|..+.+..
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~-------------- 98 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDK-------------- 98 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGG--------------
T ss_pred CCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccC--------------
Confidence 456899999999999888888 6679999999999999999987221115799999999884221
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHHHHH
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMV 700 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~v 700 (771)
..||+|+++.. -.-..+++.+++. |||.+++.... ......+
T Consensus 99 --------------------~~~D~i~~~~~--------------~~~~~~l~~~~~~--~gG~l~~~~~~--~~~~~~~ 140 (183)
T 2yxd_A 99 --------------------LEFNKAFIGGT--------------KNIEKIIEILDKK--KINHIVANTIV--LENAAKI 140 (183)
T ss_dssp --------------------CCCSEEEECSC--------------SCHHHHHHHHHHT--TCCEEEEEESC--HHHHHHH
T ss_pred --------------------CCCcEEEECCc--------------ccHHHHHHHHhhC--CCCEEEEEecc--cccHHHH
Confidence 46999999532 1237889999888 99999987643 3334456
Q ss_pred HHHHHHhc
Q 004164 701 ISRMKMVF 708 (771)
Q Consensus 701 ~~~l~~vF 708 (771)
.+.+++.-
T Consensus 141 ~~~l~~~g 148 (183)
T 2yxd_A 141 INEFESRG 148 (183)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 77777664
No 356
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.55 E-value=2.1e-07 Score=93.20 Aligned_cols=104 Identities=14% Similarity=0.175 Sum_probs=81.8
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
....+||+||+|.|.++..+... ..++++||+++.+++.|++ .+. ++++++.+|..++ ..
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~-~~~---~~~~~~~~d~~~~---~~----------- 104 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGR-HGL---DNVEFRQQDLFDW---TP----------- 104 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGG-GCC---TTEEEEECCTTSC---CC-----------
T ss_pred CCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHh-cCC---CCeEEEecccccC---CC-----------
Confidence 34569999999999999999888 4699999999999999999 332 5799999998654 11
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCccc---HHHHHHHHHccCCCcEEEEEeccCCh
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNLVSRSQ 694 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~---~~fl~~~~~~L~~~Gilv~Nl~~~~~ 694 (771)
..+||+|++.. . -.++-+ ..+|+.+++.|+|||.+++....+..
T Consensus 105 --------------------~~~~D~v~~~~--~---------l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 151 (218)
T 3ou2_A 105 --------------------DRQWDAVFFAH--W---------LAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHE 151 (218)
T ss_dssp --------------------SSCEEEEEEES--C---------GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC
T ss_pred --------------------CCceeEEEEec--h---------hhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCc
Confidence 36799999832 1 112222 68999999999999999998776643
No 357
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.54 E-value=1.2e-06 Score=85.73 Aligned_cols=123 Identities=14% Similarity=0.144 Sum_probs=87.8
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
....+||+||+|.|.++..+... ..++++||+++.+++.|++.+. +++++.+|..++ .
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~-----~~~~~~~d~~~~----~----------- 102 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFP-----EARWVVGDLSVD----Q----------- 102 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCT-----TSEEEECCTTTS----C-----------
T ss_pred cCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCC-----CCcEEEcccccC----C-----------
Confidence 35679999999999999988887 3599999999999999999872 488888887653 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHHHH
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDM 699 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~ 699 (771)
.....||+|++....- .-+ +++ .-..+|+.+.+.|+|||.+++............
T Consensus 103 ------------------~~~~~~D~i~~~~~~~---~~~--~~~--~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~ 157 (195)
T 3cgg_A 103 ------------------ISETDFDLIVSAGNVM---GFL--AED--GREPALANIHRALGADGRAVIGFGAGRGWVFGD 157 (195)
T ss_dssp ------------------CCCCCEEEEEECCCCG---GGS--CHH--HHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHH
T ss_pred ------------------CCCCceeEEEECCcHH---hhc--ChH--HHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHH
Confidence 1135799999831000 000 011 126799999999999999999876554333445
Q ss_pred HHHHHHHh-cc
Q 004164 700 VISRMKMV-FN 709 (771)
Q Consensus 700 v~~~l~~v-F~ 709 (771)
+...+.+. |.
T Consensus 158 ~~~~l~~~Gf~ 168 (195)
T 3cgg_A 158 FLEVAERVGLE 168 (195)
T ss_dssp HHHHHHHHTEE
T ss_pred HHHHHHHcCCE
Confidence 55666554 54
No 358
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.54 E-value=2.1e-07 Score=96.63 Aligned_cols=121 Identities=16% Similarity=0.125 Sum_probs=89.7
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||++|+|+|.++..+....+ +|++||+||.+++.|++.+....-+ ++++.+|..+.+.
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~~~--------------- 181 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAALP--------------- 181 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHHGG---------------
T ss_pred CCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhcCc---------------
Confidence 457899999999999998888754 9999999999999999987321112 8999999988531
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHHHHH
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMV 700 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~v 700 (771)
..+||+|+.+... .. -..++..+.+.|+|||.+++.-+... ..+.+
T Consensus 182 -------------------~~~fD~Vv~n~~~-----------~~--~~~~l~~~~~~LkpgG~lils~~~~~--~~~~v 227 (254)
T 2nxc_A 182 -------------------FGPFDLLVANLYA-----------EL--HAALAPRYREALVPGGRALLTGILKD--RAPLV 227 (254)
T ss_dssp -------------------GCCEEEEEEECCH-----------HH--HHHHHHHHHHHEEEEEEEEEEEEEGG--GHHHH
T ss_pred -------------------CCCCCEEEECCcH-----------HH--HHHHHHHHHHHcCCCCEEEEEeeccC--CHHHH
Confidence 1469999985311 11 26899999999999999998643332 24456
Q ss_pred HHHHHHh-ccceEE
Q 004164 701 ISRMKMV-FNHLFC 713 (771)
Q Consensus 701 ~~~l~~v-F~~v~~ 713 (771)
.+.+++. |..+..
T Consensus 228 ~~~l~~~Gf~~~~~ 241 (254)
T 2nxc_A 228 REAMAGAGFRPLEE 241 (254)
T ss_dssp HHHHHHTTCEEEEE
T ss_pred HHHHHHCCCEEEEE
Confidence 6777766 654433
No 359
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.53 E-value=4e-07 Score=87.36 Aligned_cols=143 Identities=14% Similarity=0.177 Sum_probs=94.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHH--HhhccCCccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFV--REMKSSSATDEM 616 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l--~~~~~~~~~~~~ 616 (771)
....+||++|+|+|.++..+...+ |..++++||+++ ++++ ++++++.+|..+.- +....
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~~~~------- 82 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKALLE------- 82 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHHHHH-------
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhhhhc-------
Confidence 345689999999999999888885 667999999999 6532 57899999987641 11100
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcc-------cHHHHHHHHHccCCCcEEEEEe
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV-------EGSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~-------~~~fl~~~~~~L~~~Gilv~Nl 689 (771)
.....+||+|+.|..-. ..+ ....- ...+++.+.+.|+|||.+++..
T Consensus 83 --------------------~~~~~~~D~i~~~~~~~--~~~----~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (180)
T 1ej0_A 83 --------------------RVGDSKVQVVMSDMAPN--MSG----TPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKV 136 (180)
T ss_dssp --------------------HHTTCCEEEEEECCCCC--CCS----CHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------------------cCCCCceeEEEECCCcc--ccC----CCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 00125799999853211 000 00000 1689999999999999999877
Q ss_pred ccCChhHHHHHHHHHHHhccceEEeeec----CCccEEEEEec
Q 004164 690 VSRSQATKDMVISRMKMVFNHLFCLQLE----EDVNLVLFGLS 728 (771)
Q Consensus 690 ~~~~~~~~~~v~~~l~~vF~~v~~~~~~----~~~N~Vl~a~~ 728 (771)
..... ...+...++..|..+...... .....+++|..
T Consensus 137 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (180)
T 1ej0_A 137 FQGEG--FDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATG 177 (180)
T ss_dssp ESSTT--HHHHHHHHHHHEEEEEEECCTTSCTTCCEEEEEEEE
T ss_pred ecCCc--HHHHHHHHHHhhhhEEeecCCcccccCceEEEEEcc
Confidence 65433 245678888888876655432 22345555543
No 360
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.53 E-value=2.1e-07 Score=93.10 Aligned_cols=101 Identities=17% Similarity=0.208 Sum_probs=78.0
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
....+||+||+|+|.++..+... ..+|++||+++.+++.|++.+.-..-++++++.+|+.+....
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~------------- 140 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQA------------- 140 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-------------
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCcc-------------
Confidence 45678999999999999999888 469999999999999999987321124799999999774222
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEecc
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 691 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 691 (771)
...||+|+++..-. .+. ..+.+.|+|||.+++.+..
T Consensus 141 --------------------~~~~D~i~~~~~~~-----------~~~-----~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 141 --------------------RAPFDAIIVTAAPP-----------EIP-----TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp --------------------GCCEEEEEESSBCS-----------SCC-----THHHHTEEEEEEEEEEECS
T ss_pred --------------------CCCccEEEEccchh-----------hhh-----HHHHHhcccCcEEEEEEcC
Confidence 25799999963221 111 2578999999999998865
No 361
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.53 E-value=2e-07 Score=98.09 Aligned_cols=110 Identities=15% Similarity=0.161 Sum_probs=83.5
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~-~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
.+.+||+||+|+|.++..|... ..+|++||+++.+++.|++.+.-. ..++++++.+|+.+....
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------------- 132 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH------------- 132 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG-------------
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh-------------
Confidence 3579999999999999988887 469999999999999999987321 136899999998765311
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCCh
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQ 694 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~ 694 (771)
...+||+|++.. . ...+ +. ...+|+.+++.|+|||.+++.......
T Consensus 133 -------------------~~~~fD~v~~~~--~--l~~~----~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~ 178 (285)
T 4htf_A 133 -------------------LETPVDLILFHA--V--LEWV----AD--PRSVLQTLWSVLRPGGVLSLMFYNAHG 178 (285)
T ss_dssp -------------------CSSCEEEEEEES--C--GGGC----SC--HHHHHHHHHHTEEEEEEEEEEEEBHHH
T ss_pred -------------------cCCCceEEEECc--h--hhcc----cC--HHHHHHHHHHHcCCCeEEEEEEeCCch
Confidence 136799999832 1 0001 11 168999999999999999998765543
No 362
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.53 E-value=3.6e-07 Score=100.32 Aligned_cols=114 Identities=11% Similarity=0.147 Sum_probs=81.9
Q ss_pred HHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCC--CC
Q 004164 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ--FM 131 (771)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~--~~ 131 (771)
..+.+++.. .+.+|||+|||+|.++..|+.. ..+|+++|+|+.+++.+++.+...+ .+++|+++|+.++. +.
T Consensus 204 ~~~~~~~~~----~~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~ 278 (369)
T 3bt7_A 204 EWALDVTKG----SKGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMN 278 (369)
T ss_dssp HHHHHHTTT----CCSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHS
T ss_pred HHHHHHhhc----CCCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHh
Confidence 344444442 3578999999999999999875 4599999999999998877665444 57999999987652 22
Q ss_pred C--------------CCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEEcCcchhhc
Q 004164 132 D--------------ETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLG 186 (771)
Q Consensus 132 ~--------------~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~~~~~~~~~ 186 (771)
. .+||+|+..-.-. .+..++.+.|+++|+++.++........
T Consensus 279 ~~~~~~~l~~~~~~~~~fD~Vv~dPPr~-------------g~~~~~~~~l~~~g~ivyvsc~p~t~ar 334 (369)
T 3bt7_A 279 GVREFNRLQGIDLKSYQCETIFVDPPRS-------------GLDSETEKMVQAYPRILYISCNPETLCK 334 (369)
T ss_dssp SCCCCTTGGGSCGGGCCEEEEEECCCTT-------------CCCHHHHHHHTTSSEEEEEESCHHHHHH
T ss_pred hccccccccccccccCCCCEEEECcCcc-------------ccHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 1 3799998532111 2345667777899999999876544433
No 363
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.53 E-value=1.4e-07 Score=99.19 Aligned_cols=121 Identities=12% Similarity=0.035 Sum_probs=92.4
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||++|+|+|.++..+....+..+|++||++|.+++.|++.+....-+++.++.+|+.++ ..
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~-------------- 183 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL-------------- 183 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC--------------
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc--------------
Confidence 456899999999999999999887779999999999999999987332224588999999876 22
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCCh---hHH
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQ---ATK 697 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~---~~~ 697 (771)
..+||+|++|.. . --.+++..+.+.|+|||++++....... +..
T Consensus 184 -------------------~~~~D~Vi~d~p------------~--~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~ 230 (272)
T 3a27_A 184 -------------------KDVADRVIMGYV------------H--KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERP 230 (272)
T ss_dssp -------------------TTCEEEEEECCC------------S--SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHH
T ss_pred -------------------cCCceEEEECCc------------c--cHHHHHHHHHHHcCCCCEEEEEEcCccccccccH
Confidence 157999999632 1 2256899999999999999987765422 334
Q ss_pred HHHHHHHHHhcc
Q 004164 698 DMVISRMKMVFN 709 (771)
Q Consensus 698 ~~v~~~l~~vF~ 709 (771)
...+..+.+.+.
T Consensus 231 ~~~~~~~~~~~~ 242 (272)
T 3a27_A 231 IERLKFYAEKNG 242 (272)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhC
Confidence 455667776553
No 364
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.53 E-value=1.8e-07 Score=95.45 Aligned_cols=103 Identities=15% Similarity=0.090 Sum_probs=80.6
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
.+.+||+||+|+|.++..+....+ +|++||+++.+++.|++.+.- +++++.+|..+. ..
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~---~~------------ 100 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKD----GITYIHSRFEDA---QL------------ 100 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGC---CC------------
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHc---Cc------------
Confidence 456899999999999999988765 799999999999999999852 799999998764 11
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHH-HccCCCcEEEEEeccCC
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVK-DALSEQGLFIVNLVSRS 693 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~-~~L~~~Gilv~Nl~~~~ 693 (771)
+..||+|++-- ....+ + -...+|+.++ +.|+|||.+++......
T Consensus 101 -------------------~~~fD~v~~~~----~l~~~--~----~~~~~l~~~~~~~LkpgG~l~i~~~~~~ 145 (250)
T 2p7i_A 101 -------------------PRRYDNIVLTH----VLEHI--D----DPVALLKRINDDWLAEGGRLFLVCPNAN 145 (250)
T ss_dssp -------------------SSCEEEEEEES----CGGGC--S----SHHHHHHHHHHTTEEEEEEEEEEEECTT
T ss_pred -------------------CCcccEEEEhh----HHHhh--c----CHHHHHHHHHHHhcCCCCEEEEEcCChH
Confidence 36799999721 11111 0 1268999999 99999999999875543
No 365
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.52 E-value=5.2e-07 Score=94.48 Aligned_cols=117 Identities=16% Similarity=0.210 Sum_probs=88.5
Q ss_pred CCCCcEEEEeccccHHHHHHHHh-CCCCcEEEEEcCHHHHHHHHhhcCCC---CCCCeeEEEcchHHHHHhhccCCcccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYFGFT---QDKSLKVHITDGIKFVREMKSSSATDE 615 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~-~p~~~i~~VEiD~~v~~vA~~~Fg~~---~~~r~~v~i~Dg~~~l~~~~~~~~~~~ 615 (771)
....+||++|+|.|.++..|... .|..+|++||+++.+++.|++.+.-. ..++++++.+|+.+. ..
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~--~~-------- 167 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS--EL-------- 167 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC--CC--------
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc--CC--------
Confidence 34568999999999999988885 46789999999999999999987210 135799999998653 11
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChh
Q 004164 616 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQA 695 (771)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~ 695 (771)
....||+|++|+... ..+++.+.+.|+|||.+++...+. +
T Consensus 168 -----------------------~~~~~D~v~~~~~~~---------------~~~l~~~~~~L~pgG~l~~~~~~~--~ 207 (280)
T 1i9g_A 168 -----------------------PDGSVDRAVLDMLAP---------------WEVLDAVSRLLVAGGVLMVYVATV--T 207 (280)
T ss_dssp -----------------------CTTCEEEEEEESSCG---------------GGGHHHHHHHEEEEEEEEEEESSH--H
T ss_pred -----------------------CCCceeEEEECCcCH---------------HHHHHHHHHhCCCCCEEEEEeCCH--H
Confidence 125799999965311 368999999999999999887543 3
Q ss_pred HHHHHHHHHHH
Q 004164 696 TKDMVISRMKM 706 (771)
Q Consensus 696 ~~~~v~~~l~~ 706 (771)
....++..+++
T Consensus 208 ~~~~~~~~l~~ 218 (280)
T 1i9g_A 208 QLSRIVEALRA 218 (280)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 34456677765
No 366
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.52 E-value=1e-06 Score=88.54 Aligned_cols=99 Identities=14% Similarity=0.175 Sum_probs=78.1
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||+||+|.|.++..|... ..++++||+++.+++.|++.+. .+++++.+|+.++ .
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~----~------------ 102 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSF----E------------ 102 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSC----C------------
T ss_pred CCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhc----C------------
Confidence 4579999999999999988887 4699999999999999999986 5788998887653 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCccc---HHHHHHHHHccCCCcEEEEEec
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNLV 690 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~---~~fl~~~~~~L~~~Gilv~Nl~ 690 (771)
.. ..||+|++.. . -..+-+ ..+|+.+++.|+|||.+++...
T Consensus 103 -----------------~~-~~fD~v~~~~--~---------l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 103 -----------------VP-TSIDTIVSTY--A---------FHHLTDDEKNVAIAKYSQLLNKGGKIVFADT 146 (220)
T ss_dssp -----------------CC-SCCSEEEEES--C---------GGGSCHHHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred -----------------CC-CCeEEEEECc--c---------hhcCChHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 11 5799999841 1 112222 3389999999999999998753
No 367
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.51 E-value=4.2e-07 Score=90.94 Aligned_cols=119 Identities=12% Similarity=0.046 Sum_probs=76.2
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
.+.+||.||.| ..+.++... +..+|++||.|+...+.|+++| |+...++++++++|+.+...-.. +.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~---p~---- 99 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGH---PV---- 99 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGC---BS----
T ss_pred CCCEEEEECch--HHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccc---cc----
Confidence 35799999985 455555553 4679999999999999999999 44225789999999764310000 00
Q ss_pred cccccccccCCCCCCCCC------CCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEE-Eec
Q 004164 618 VVHGNEITSNNTRSCNGN------CTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIV-NLV 690 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~------~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~-Nl~ 690 (771)
+. ........ .......||+||+|.+.. ..++..+..+|+|||++++ |+.
T Consensus 100 -----~~---~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~---------------~~~~~~~l~~l~~GG~Iv~DNv~ 156 (202)
T 3cvo_A 100 -----SD---AKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR---------------VGCALATAFSITRPVTLLFDDYS 156 (202)
T ss_dssp -----SS---TTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH---------------HHHHHHHHHHCSSCEEEEETTGG
T ss_pred -----cc---hhhhhHHHHhhhhhccccCCCCCEEEEeCCCc---------------hhHHHHHHHhcCCCeEEEEeCCc
Confidence 00 00000000 000125799999987422 3666777799999999988 554
Q ss_pred cC
Q 004164 691 SR 692 (771)
Q Consensus 691 ~~ 692 (771)
.+
T Consensus 157 ~r 158 (202)
T 3cvo_A 157 QR 158 (202)
T ss_dssp GC
T ss_pred CC
Confidence 44
No 368
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.51 E-value=2.9e-07 Score=95.37 Aligned_cols=104 Identities=13% Similarity=0.232 Sum_probs=77.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
....+||+||+|+|.++..|....+ +|++||+++.+++.|++.+.-..-++++++++|+.++ .
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l----~----------- 98 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM----P----------- 98 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC----C-----------
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhC----C-----------
Confidence 4567999999999999999988874 8999999999999999886211124699999997542 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEE
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 688 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~N 688 (771)
..+..||+|+... . ...+ | --..+|+.+++.|+|||.|++-
T Consensus 99 ------------------~~~~~fD~V~~~~--~--l~~~--~----d~~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 99 ------------------FTDERFHIVTCRI--A--AHHF--P----NPASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp ------------------SCTTCEEEEEEES--C--GGGC--S----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------------------CCCCCEEEEEEhh--h--hHhc--C----CHHHHHHHHHHHcCCCCEEEEE
Confidence 1136799999832 1 0011 0 1268999999999999999974
No 369
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.51 E-value=1.7e-07 Score=98.83 Aligned_cols=119 Identities=10% Similarity=0.045 Sum_probs=88.8
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~-~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
...+||++|+|+|.++..+....+. +|++||++|.+++.|++..... -+++++++.+|+.++..
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-------------- 189 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-------------- 189 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--------------
T ss_pred CCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc--------------
Confidence 3578999999999999999988765 8999999999999999987321 14579999999977632
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCC----hh
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS----QA 695 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~----~~ 695 (771)
..+||+|++|. | ....+++..+.+.|+|||+|++-..... ..
T Consensus 190 --------------------~~~fD~Vi~~~------------p--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~ 235 (278)
T 2frn_A 190 --------------------ENIADRILMGY------------V--VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPRE 235 (278)
T ss_dssp --------------------CSCEEEEEECC------------C--SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTT
T ss_pred --------------------cCCccEEEECC------------c--hhHHHHHHHHHHHCCCCeEEEEEEeecccccccc
Confidence 25799999952 1 1126789999999999999998654431 23
Q ss_pred HHHHHHHHHHHhc
Q 004164 696 TKDMVISRMKMVF 708 (771)
Q Consensus 696 ~~~~v~~~l~~vF 708 (771)
..+.+...+++.-
T Consensus 236 ~~~~i~~~~~~~G 248 (278)
T 2frn_A 236 PFETFKRITKEYG 248 (278)
T ss_dssp THHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC
Confidence 3444555555443
No 370
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.51 E-value=1.8e-07 Score=95.94 Aligned_cols=107 Identities=18% Similarity=0.241 Sum_probs=78.8
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
.+.+||+||+|+|.++..|.... ..+|++||+++.+++.|++.+.-....+++++.+|..++ .
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~------------ 141 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDF----T------------ 141 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGC----C------------
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhc----C------------
Confidence 46799999999999998887776 459999999999999999998532234689999986543 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEe
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 689 (771)
....+||+|+++. . ...+ |.+. -..+|+.+++.|+|||.|++..
T Consensus 142 -----------------~~~~~fD~v~~~~--~--l~~~--~~~~--~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 142 -----------------PEPDSYDVIWIQW--V--IGHL--TDQH--LAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp -----------------CCSSCEEEEEEES--C--GGGS--CHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----------------CCCCCEEEEEEcc--h--hhhC--CHHH--HHHHHHHHHHhcCCCeEEEEEE
Confidence 1135799999852 1 0000 1111 1479999999999999999843
No 371
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.50 E-value=2e-07 Score=95.04 Aligned_cols=139 Identities=19% Similarity=0.186 Sum_probs=97.9
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
...+||+||+|.|.++..+....|..+|++||+||..++.|++.. |+ +++++++.+|+++-+..
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl--~~~i~~~~~d~l~~l~~----------- 81 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGL--KEKIQVRLANGLAAFEE----------- 81 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC--TTTEEEEECSGGGGCCG-----------
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CceEEEEECchhhhccc-----------
Confidence 446899999999999999999988889999999999999999886 55 56899999999764321
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHH
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 697 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~ 697 (771)
+.+||+|++- || ..-+-.++|..+...|+++|.||++-... .
T Consensus 82 ----------------------~~~~D~Ivia--------G~----Gg~~i~~Il~~~~~~L~~~~~lVlq~~~~----~ 123 (225)
T 3kr9_A 82 ----------------------TDQVSVITIA--------GM----GGRLIARILEEGLGKLANVERLILQPNNR----E 123 (225)
T ss_dssp ----------------------GGCCCEEEEE--------EE----CHHHHHHHHHHTGGGCTTCCEEEEEESSC----H
T ss_pred ----------------------CcCCCEEEEc--------CC----ChHHHHHHHHHHHHHhCCCCEEEEECCCC----H
Confidence 1259999871 22 01123789999999999999999987532 2
Q ss_pred HHHHHHHHHh-ccceEEeeecCC--ccEEEEEecCC
Q 004164 698 DMVISRMKMV-FNHLFCLQLEED--VNLVLFGLSSE 730 (771)
Q Consensus 698 ~~v~~~l~~v-F~~v~~~~~~~~--~N~Vl~a~~~~ 730 (771)
..+...|.+. |.-+-..-+.++ .=+|+.+.+.+
T Consensus 124 ~~vr~~L~~~Gf~i~~e~lv~e~~~~Yeii~~~~~~ 159 (225)
T 3kr9_A 124 DDLRIWLQDHGFQIVAESILEEAGKFYEILVVEAGQ 159 (225)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEETTEEEEEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeCC
Confidence 2344555444 442222212222 23566666543
No 372
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.50 E-value=2.8e-07 Score=94.97 Aligned_cols=103 Identities=11% Similarity=0.104 Sum_probs=79.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
....+||+||+|+|.++..|...+ ..++++||+++.+++.|++.+ |+ .++++++.+|+.+...
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~--~~~v~~~~~d~~~~~~----------- 100 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGV--SERVHFIHNDAAGYVA----------- 100 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCCTTCCC-----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEECChHhCCc-----------
Confidence 345689999999999999998887 458999999999999999886 44 4579999999865310
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEe
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 689 (771)
+..||+|++- ..-.. + + --..+|+.+++.|+|||.+++..
T Consensus 101 -----------------------~~~fD~V~~~-~~~~~---~----~--~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 101 -----------------------NEKCDVAACV-GATWI---A----G--GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp -----------------------SSCEEEEEEE-SCGGG---T----S--SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred -----------------------CCCCCEEEEC-CChHh---c----C--CHHHHHHHHHHHcCCCeEEEEec
Confidence 2579999971 11100 0 0 13889999999999999999854
No 373
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.50 E-value=1.7e-07 Score=93.57 Aligned_cols=113 Identities=15% Similarity=0.154 Sum_probs=82.3
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
....+||+||+|.|.++..+....+. +|++||+++.+++.|++.+.- .++++++.+|+.+. ..
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~--~~------------ 103 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKL--DF------------ 103 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSC--CS------------
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcC--CC------------
Confidence 34578999999999999988887554 899999999999999999752 46899999998653 11
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCC---c-----Cc-ccHHHHHHHHHccCCCcEEEEEec
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPA---A-----DF-VEGSFLLTVKDALSEQGLFIVNLV 690 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp---~-----~f-~~~~fl~~~~~~L~~~Gilv~Nl~ 690 (771)
....||+|+....- ..+.|.. . .. ....+|+.+.+.|+|||.+++...
T Consensus 104 -------------------~~~~fD~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 104 -------------------PSASFDVVLEKGTL----DALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp -------------------CSSCEEEEEEESHH----HHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred -------------------CCCcccEEEECcch----hhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 13579999973210 0000000 0 00 127899999999999999998775
Q ss_pred cC
Q 004164 691 SR 692 (771)
Q Consensus 691 ~~ 692 (771)
..
T Consensus 161 ~~ 162 (215)
T 2pxx_A 161 AA 162 (215)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 374
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.49 E-value=3.3e-07 Score=101.40 Aligned_cols=122 Identities=17% Similarity=0.200 Sum_probs=87.0
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCC---------------------------------------C
Q 004164 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF---------------------------------------H 92 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~---------------------------------------~ 92 (771)
.+...+..+... .++..|||++||+|.++.+++..+. .
T Consensus 188 ~lAa~ll~l~~~---~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 264 (393)
T 3k0b_A 188 TMAAALVLLTSW---HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPL 264 (393)
T ss_dssp HHHHHHHHHSCC---CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred HHHHHHHHHhCC---CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCc
Confidence 444555555543 5678999999999999988876422 3
Q ss_pred eEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHcccc
Q 004164 93 GITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKS 170 (771)
Q Consensus 93 ~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkp 170 (771)
+|+|+|+++.+++.+++.+...+ ..+++.++|+.+++.+ .+||+|+++-....-.... ..+..+...+.+.||+
T Consensus 265 ~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~---~~l~~ly~~lg~~lk~ 340 (393)
T 3k0b_A 265 NIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDE---EAVRQLYREMGIVYKR 340 (393)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHH---HHHHHHHHHHHHHHHT
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCc---hhHHHHHHHHHHHHhc
Confidence 59999999999998877765554 3599999999998765 5899999875543221111 1244556666666665
Q ss_pred --CeEEEEEEcC
Q 004164 171 --GGKFVCLTLA 180 (771)
Q Consensus 171 --GG~~ii~~~~ 180 (771)
||.+++++..
T Consensus 341 ~~g~~~~iit~~ 352 (393)
T 3k0b_A 341 MPTWSVYVLTSY 352 (393)
T ss_dssp CTTCEEEEEECC
T ss_pred CCCCEEEEEECC
Confidence 8888888754
No 375
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.49 E-value=2.6e-07 Score=96.92 Aligned_cols=88 Identities=10% Similarity=0.057 Sum_probs=71.8
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCC
Q 004164 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQF 130 (771)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~ 130 (771)
+.+...+.+.+.. .++ +|||||||+|.++..|++.+. +|+++|+++.+++.++++.. ..+++++++|+.++++
T Consensus 33 ~~i~~~Iv~~~~~---~~~-~VLEIG~G~G~lt~~L~~~~~-~V~avEid~~~~~~l~~~~~--~~~v~vi~~D~l~~~~ 105 (271)
T 3fut_A 33 EAHLRRIVEAARP---FTG-PVFEVGPGLGALTRALLEAGA-EVTAIEKDLRLRPVLEETLS--GLPVRLVFQDALLYPW 105 (271)
T ss_dssp HHHHHHHHHHHCC---CCS-CEEEECCTTSHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTT--TSSEEEEESCGGGSCG
T ss_pred HHHHHHHHHhcCC---CCC-eEEEEeCchHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcC--CCCEEEEECChhhCCh
Confidence 4566667777654 567 999999999999999999975 89999999999998877764 3589999999999887
Q ss_pred CCC-CccEEEeccccc
Q 004164 131 MDE-TFDVILDKGGLD 145 (771)
Q Consensus 131 ~~~-sFDlVi~~~~l~ 145 (771)
++. .||.|+++-..+
T Consensus 106 ~~~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 106 EEVPQGSLLVANLPYH 121 (271)
T ss_dssp GGSCTTEEEEEEECSS
T ss_pred hhccCccEEEecCccc
Confidence 653 689888765444
No 376
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.49 E-value=2.6e-06 Score=93.40 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=80.1
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-CCCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~-~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
....+||+||+|.|.++..+.+.+|..+++++|+ |.+++.|++.+.- ...++++++.+|..+ ...
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~---~~p---------- 266 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE---TIP---------- 266 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT---CCC----------
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC---CCC----------
Confidence 4567999999999999999999999999999999 9999999998721 125789999999862 211
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccH---HHHHHHHHccCCCcEEEEEe
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEG---SFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~---~fl~~~~~~L~~~Gilv~Nl 689 (771)
..||+|++-- . -..+-++ .+|+.+++.|+|||.|++.-
T Consensus 267 ----------------------~~~D~v~~~~--v---------lh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 267 ----------------------DGADVYLIKH--V---------LHDWDDDDVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp ----------------------SSCSEEEEES--C---------GGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred ----------------------CCceEEEhhh--h---------hccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 2699998821 1 1122223 58999999999999998753
No 377
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.49 E-value=5.6e-07 Score=99.20 Aligned_cols=122 Identities=13% Similarity=0.160 Sum_probs=89.1
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCC---------------------------------------C
Q 004164 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF---------------------------------------H 92 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~---------------------------------------~ 92 (771)
.+...+..+... .++..+||++||+|.+..+++..+. .
T Consensus 181 ~LAaall~l~~~---~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 257 (384)
T 3ldg_A 181 NMAAAIILLSNW---FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQL 257 (384)
T ss_dssp HHHHHHHHHTTC---CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred HHHHHHHHHhCC---CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCc
Confidence 444555555544 5678999999999999988776422 2
Q ss_pred eEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHcccc
Q 004164 93 GITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKS 170 (771)
Q Consensus 93 ~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkp 170 (771)
+|+|+|+++.+++.+++.+...+ ..+++.++|+.+++.+ .+||+|+++-....-...+ ..+..+..++.+.||+
T Consensus 258 ~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~---~~l~~ly~~lg~~lk~ 333 (384)
T 3ldg_A 258 DISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDD---KAVDILYNEMGETFAP 333 (384)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCH---HHHHHHHHHHHHHHTT
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCH---HHHHHHHHHHHHHHhh
Confidence 59999999999998877765554 3599999999998765 5899999986554332221 1255666667777766
Q ss_pred --CeEEEEEEcC
Q 004164 171 --GGKFVCLTLA 180 (771)
Q Consensus 171 --GG~~ii~~~~ 180 (771)
||.+++++..
T Consensus 334 ~~g~~~~iit~~ 345 (384)
T 3ldg_A 334 LKTWSQFILTND 345 (384)
T ss_dssp CTTSEEEEEESC
T ss_pred CCCcEEEEEECC
Confidence 9998888764
No 378
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.49 E-value=5.6e-07 Score=86.67 Aligned_cols=136 Identities=15% Similarity=0.156 Sum_probs=92.5
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
....+||+||+|.|.++..+..... ++++||+++.+++.|++. .++++++.+| . ...
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d-~----~~~----------- 72 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEK-----FDSVITLSDP-K----EIP----------- 72 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHH-----CTTSEEESSG-G----GSC-----------
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHh-----CCCcEEEeCC-C----CCC-----------
Confidence 3456899999999999999888873 999999999999999998 3579999998 1 111
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChh----
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQA---- 695 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~---- 695 (771)
..+||+|+....- ..+ + -...+++.+++.|+|||.+++..+.....
T Consensus 73 --------------------~~~~D~v~~~~~l----~~~----~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~ 122 (170)
T 3i9f_A 73 --------------------DNSVDFILFANSF----HDM----D--DKQHVISEVKRILKDDGRVIIIDWRKENTGIGP 122 (170)
T ss_dssp --------------------TTCEEEEEEESCS----TTC----S--CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSS
T ss_pred --------------------CCceEEEEEccch----hcc----c--CHHHHHHHHHHhcCCCCEEEEEEcCccccccCc
Confidence 3679999973211 111 1 13689999999999999999876543211
Q ss_pred ------HHHHHHHHHHHhccceEEeeecCCccEEEEEecCC
Q 004164 696 ------TKDMVISRMKMVFNHLFCLQLEEDVNLVLFGLSSE 730 (771)
Q Consensus 696 ------~~~~v~~~l~~vF~~v~~~~~~~~~N~Vl~a~~~~ 730 (771)
..+.+.+.++ =|..+...... .....+++....
T Consensus 123 ~~~~~~~~~~~~~~l~-Gf~~~~~~~~~-~~~~~l~~~~~~ 161 (170)
T 3i9f_A 123 PLSIRMDEKDYMGWFS-NFVVEKRFNPT-PYHFGLVLKRKT 161 (170)
T ss_dssp CGGGCCCHHHHHHHTT-TEEEEEEECSS-TTEEEEEEEECC
T ss_pred hHhhhcCHHHHHHHHh-CcEEEEccCCC-CceEEEEEecCC
Confidence 1233444444 55544444433 344555555444
No 379
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.49 E-value=2.7e-07 Score=95.28 Aligned_cols=109 Identities=12% Similarity=0.151 Sum_probs=83.1
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
....+||+||+|.|.++..+...+ ..+|++||+++.+++.|++.+.-. ++++++.+|+.+. .
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~----~----------- 115 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTK----E----------- 115 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTC----C-----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccC----C-----------
Confidence 455799999999999999998876 569999999999999999998642 7899999998653 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
....+||+|+... . ...+ |+. --..+|+.+++.|+|||.+++.....
T Consensus 116 ------------------~~~~~fD~v~~~~--~--l~~~--~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 116 ------------------FPENNFDLIYSRD--A--ILAL--SLE--NKNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp ------------------CCTTCEEEEEEES--C--GGGS--CHH--HHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred ------------------CCCCcEEEEeHHH--H--HHhc--ChH--HHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 1136799999831 1 0001 111 22679999999999999999876543
No 380
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.48 E-value=2.4e-07 Score=100.40 Aligned_cols=113 Identities=15% Similarity=0.168 Sum_probs=80.8
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcC------C---CCcEEEEeecCCCCC----CCCC
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRD------R---SDMRWRVMDMTSMQF----MDET 134 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~------~---~~i~~~~~D~~~l~~----~~~s 134 (771)
.+.+||+||||+|.++.++++.+..+|++||+++.+++.+++.+... . ++++++.+|+...-- ..++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 46899999999999999999887679999999999999887665321 1 269999999987531 3578
Q ss_pred ccEEEecccc-ccccCcc--cchHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 135 FDVILDKGGL-DALMEPE--LGHKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 135 FDlVi~~~~l-~~l~~~~--~~~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
||+|+....- ..-..+. .....++.++..+.++|+|||++++...+
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 9999975432 1000110 11122445555559999999999987654
No 381
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.48 E-value=3e-07 Score=101.48 Aligned_cols=122 Identities=16% Similarity=0.154 Sum_probs=88.5
Q ss_pred HHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCC---------------------------------------C
Q 004164 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF---------------------------------------H 92 (771)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~---------------------------------------~ 92 (771)
.+...+..+... .++..|||+|||+|.++..++..+. .
T Consensus 182 ~lAa~ll~~~~~---~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 258 (385)
T 3ldu_A 182 TLAAGLIYLTPW---KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKF 258 (385)
T ss_dssp HHHHHHHHTSCC---CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCC
T ss_pred HHHHHHHHhhCC---CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCc
Confidence 344455555543 5678999999999999988876531 3
Q ss_pred eEEEEcCCHHHHHHHHHHhhcCC--CCcEEEEeecCCCCCCCCCccEEEeccccccccCcccchHHHHHHHHHHHHcccc
Q 004164 93 GITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQFMDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKS 170 (771)
Q Consensus 93 ~V~~vDiS~~~i~~~~~~~~~~~--~~i~~~~~D~~~l~~~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkp 170 (771)
+|+|+|+++.+++.+++.+...+ ..++|.++|+.+++.+ ++||+|+++-....-... ...+..+..++.+.|++
T Consensus 259 ~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~---~~~l~~ly~~lg~~lk~ 334 (385)
T 3ldu_A 259 KIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLED---KDSVKQLYKELGYAFRK 334 (385)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHH---HHHHHHHHHHHHHHHHT
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCC---HHHHHHHHHHHHHHHhh
Confidence 69999999999998877765444 3699999999998764 589999987665422211 11255667777777776
Q ss_pred --CeEEEEEEcC
Q 004164 171 --GGKFVCLTLA 180 (771)
Q Consensus 171 --GG~~ii~~~~ 180 (771)
||.+++++..
T Consensus 335 ~~g~~~~iit~~ 346 (385)
T 3ldu_A 335 LKNWSYYLITSY 346 (385)
T ss_dssp SBSCEEEEEESC
T ss_pred CCCCEEEEEECC
Confidence 8888888754
No 382
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.48 E-value=9.3e-07 Score=88.73 Aligned_cols=105 Identities=14% Similarity=0.165 Sum_probs=79.9
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
..+.+||+||+|.|.++..+... ..++++||+++.+++.|++. .++.++.+|..++.....
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~----------- 111 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAKV----------- 111 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTCS-----------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh------cccccchhhHHhhccccc-----------
Confidence 34589999999999999988887 45899999999999999988 357888899877632211
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
..+.+||+|++...-. . . --..+|+.+++.|+|||.|++.....
T Consensus 112 ------------------~~~~~fD~v~~~~~l~-----~----~--~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 112 ------------------PVGKDYDLICANFALL-----H----Q--DIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp ------------------CCCCCEEEEEEESCCC-----S----S--CCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ------------------ccCCCccEEEECchhh-----h----h--hHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 1235699999832111 0 1 12689999999999999999977543
No 383
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.48 E-value=2.7e-07 Score=93.12 Aligned_cols=107 Identities=17% Similarity=0.223 Sum_probs=80.3
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||+||+|+|.++..+....+ ++++||++|.+++.|++.+... .++++++.+|..++ .
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~d~~~~----~------------ 98 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR-ESNVEFIVGDARKL----S------------ 98 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT-TCCCEEEECCTTSC----C------------
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc-CCCceEEECchhcC----C------------
Confidence 367999999999999999998876 8999999999999999987422 26799999997652 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEecc
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 691 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 691 (771)
....+||+|++.- .-... +.. --..+++.+++.|+|||.+++....
T Consensus 99 -----------------~~~~~~D~v~~~~--~~~~~----~~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 99 -----------------FEDKTFDYVIFID--SIVHF----EPL--ELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp -----------------SCTTCEEEEEEES--CGGGC----CHH--HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -----------------CCCCcEEEEEEcC--chHhC----CHH--HHHHHHHHHHHHcCCCcEEEEEecC
Confidence 0135799999841 10000 011 1267999999999999999987643
No 384
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.47 E-value=5.2e-07 Score=102.30 Aligned_cols=132 Identities=14% Similarity=0.193 Sum_probs=96.7
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
...+||++|+|.|..+..|...++ ...|++||+++.+++.+++.+ |+ .++.++.+|+.++....
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~---~nv~~~~~D~~~~~~~~--------- 184 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI---SNVALTHFDGRVFGAAV--------- 184 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC---CSEEEECCCSTTHHHHS---------
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEeCCHHHhhhhc---------
Confidence 457899999999999999999875 469999999999999999886 55 35999999998864322
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCc-CCcCc-------------ccHHHHHHHHHccCCC
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTC-PAADF-------------VEGSFLLTVKDALSEQ 682 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~-pp~~f-------------~~~~fl~~~~~~L~~~ 682 (771)
...||+|++|+-.+. .|+.. .|... +...+|+.+.+.|+||
T Consensus 185 -----------------------~~~fD~Il~D~PcSg--~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG 239 (479)
T 2frx_A 185 -----------------------PEMFDAILLDAPCSG--EGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPG 239 (479)
T ss_dssp -----------------------TTCEEEEEEECCCCC--GGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred -----------------------cccCCEEEECCCcCC--cccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 256999999984431 12211 11111 1357899999999999
Q ss_pred cEEEEEeccCChhHHHHHHHHHHHhcc
Q 004164 683 GLFIVNLVSRSQATKDMVISRMKMVFN 709 (771)
Q Consensus 683 Gilv~Nl~~~~~~~~~~v~~~l~~vF~ 709 (771)
|.|++...+-..+..+.++..+.+-++
T Consensus 240 G~LvysTcs~~~~Ene~vv~~~l~~~~ 266 (479)
T 2frx_A 240 GTLVYSTCTLNQEENEAVCLWLKETYP 266 (479)
T ss_dssp EEEEEEESCCSSTTTHHHHHHHHHHST
T ss_pred CEEEEecccCCcccCHHHHHHHHHHCC
Confidence 999998766655555556666554444
No 385
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.47 E-value=2.1e-07 Score=96.46 Aligned_cols=156 Identities=13% Similarity=0.049 Sum_probs=94.1
Q ss_pred HHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHh-hcCCCCcEEEEeecCCCCCCCCC
Q 004164 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRN-VRDRSDMRWRVMDMTSMQFMDET 134 (771)
Q Consensus 57 l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~-~~~~~~i~~~~~D~~~l~~~~~s 134 (771)
|.++..+....++.+|||||||+|.++..+++. +...++++|++-.+. +.... ...+.++.+...++....++++.
T Consensus 63 L~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~--~~pi~~~~~g~~ii~~~~~~dv~~l~~~~ 140 (277)
T 3evf_A 63 LRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGH--EKPMNVQSLGWNIITFKDKTDIHRLEPVK 140 (277)
T ss_dssp HHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTC--CCCCCCCBTTGGGEEEECSCCTTTSCCCC
T ss_pred HHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCc--ccccccCcCCCCeEEEeccceehhcCCCC
Confidence 444443323357889999999999999988876 556788898884221 00000 01122566677776666777889
Q ss_pred ccEEEeccccccccCcccchHHHHHHHHHHHHccccC-eEEEEEEcC--cchhhcchhhhhccCcEEEEeecCCCCCCCC
Q 004164 135 FDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSG-GKFVCLTLA--ESHVLGLLFPKFRFGWKMSVHAIPQKSSSEP 211 (771)
Q Consensus 135 FDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpG-G~~ii~~~~--~~~~~~~l~~~~~~~w~~~~~~i~~~~~~~~ 211 (771)
||+|++..+.+ ......+......+|+.+.++|+|| |.|++-.+. .+.+ ..+...++..|..-...-| ++...
T Consensus 141 ~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~-~~l~~~lk~~F~~V~~~KP--aSR~~ 216 (277)
T 3evf_A 141 CDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDV-LEKLELLQRRFGGTVIRNP--LSRNS 216 (277)
T ss_dssp CSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHH-HHHHHHHHHHHCCEEECCT--TSCTT
T ss_pred ccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccH-HHHHHHHHHhcCCEEEEeC--CCCCC
Confidence 99999987666 2221111111224578899999999 999997776 3433 2344444433333333333 33445
Q ss_pred CCccEEE
Q 004164 212 SLQTFMV 218 (771)
Q Consensus 212 ~l~~f~~ 218 (771)
+.+.|++
T Consensus 217 S~E~Y~V 223 (277)
T 3evf_A 217 THEMYYV 223 (277)
T ss_dssp CCCEEEE
T ss_pred CCceEEE
Confidence 5565655
No 386
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.47 E-value=4.6e-07 Score=92.42 Aligned_cols=105 Identities=13% Similarity=0.092 Sum_probs=80.9
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
+...+||+||+|+|.++..+... ..+|++||+++.+++.|++... ..+++++.+|..+. .
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~----~----------- 111 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGE---GPDLSFIKGDLSSL----P----------- 111 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTC---BTTEEEEECBTTBC----S-----------
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcc---cCCceEEEcchhcC----C-----------
Confidence 34579999999999999988887 3589999999999999999863 47899999997653 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
....+||+|++-. . ...+ + -...+|+.+++.|+|||.+++.....
T Consensus 112 ------------------~~~~~fD~v~~~~--~--l~~~----~--~~~~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 112 ------------------FENEQFEAIMAIN--S--LEWT----E--EPLRALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp ------------------SCTTCEEEEEEES--C--TTSS----S--CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred ------------------CCCCCccEEEEcC--h--Hhhc----c--CHHHHHHHHHHHhCCCeEEEEEEcCC
Confidence 1136799999731 1 1111 1 12589999999999999999987544
No 387
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.47 E-value=7.3e-07 Score=94.28 Aligned_cols=142 Identities=11% Similarity=0.106 Sum_probs=93.2
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 542 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
..+||+||+|+|.++..|... |..+|++||+++.++++|++.. |+ .++++++.+|..+.+.
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l--~~~v~~~~~D~~~~~~------------- 187 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGV--SDRFFVRKGEFLEPFK------------- 187 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTC--TTSEEEEESSTTGGGG-------------
T ss_pred CCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECcchhhcc-------------
Confidence 468999999999999999998 8899999999999999999886 43 4579999999987432
Q ss_pred ccccccccCCCCCCCCCCCCCCCce---eEEEEeCCCCCCCCCC-----CcCCcCcc----cHHHHHHHH-HccCCCcEE
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARV---DILIIDVDSPDSSSGM-----TCPAADFV----EGSFLLTVK-DALSEQGLF 685 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~y---DvIi~D~~s~d~~~g~-----s~pp~~f~----~~~fl~~~~-~~L~~~Gil 685 (771)
.+| |+|+.+.--......+ ..|...+. ...+++.+. +.|+|||.|
T Consensus 188 ----------------------~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l 245 (284)
T 1nv8_A 188 ----------------------EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIV 245 (284)
T ss_dssp ----------------------GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEE
T ss_pred ----------------------cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEE
Confidence 247 9999962100000001 01111111 127999999 999999999
Q ss_pred EEEeccCChhHHHHHHHHHHHhccceEEeeecCCccEEEEEec
Q 004164 686 IVNLVSRSQATKDMVISRMKMVFNHLFCLQLEEDVNLVLFGLS 728 (771)
Q Consensus 686 v~Nl~~~~~~~~~~v~~~l~~vF~~v~~~~~~~~~N~Vl~a~~ 728 (771)
++-+-... .+. +.+.|......+--.+...++++..
T Consensus 246 ~~e~~~~q---~~~----v~~~~~~~~~~~D~~g~~R~~~~~~ 281 (284)
T 1nv8_A 246 LMEIGEDQ---VEE----LKKIVSDTVFLKDSAGKYRFLLLNR 281 (284)
T ss_dssp EEECCTTC---HHH----HTTTSTTCEEEECTTSSEEEEEEEC
T ss_pred EEEECchH---HHH----HHHHHHhCCeecccCCCceEEEEEE
Confidence 98653222 222 3334433222222234567777654
No 388
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.46 E-value=9.3e-07 Score=90.58 Aligned_cols=141 Identities=16% Similarity=0.215 Sum_probs=91.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC-CCCcEEEEEcCHHHH----HHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTML----NLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATD 614 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiD~~v~----~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~ 614 (771)
....+||+||+|+|.++..+.... |..+|++||++|.++ +.|++. .++.++++|+...- ...
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r------~nv~~i~~Da~~~~-~~~------ 141 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR------PNIFPLLADARFPQ-SYK------ 141 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC------TTEEEEECCTTCGG-GTT------
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc------CCeEEEEcccccch-hhh------
Confidence 345789999999999999888765 567999999999774 455543 46899999986421 000
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCC-
Q 004164 615 EMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS- 693 (771)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~- 693 (771)
....+||+|++|+-..+ ...-++..+++.|+|||.|++-+-.++
T Consensus 142 -----------------------~~~~~~D~I~~d~a~~~------------~~~il~~~~~~~LkpGG~lvisik~~~~ 186 (232)
T 3id6_C 142 -----------------------SVVENVDVLYVDIAQPD------------QTDIAIYNAKFFLKVNGDMLLVIKARSI 186 (232)
T ss_dssp -----------------------TTCCCEEEEEECCCCTT------------HHHHHHHHHHHHEEEEEEEEEEEC----
T ss_pred -----------------------ccccceEEEEecCCChh------------HHHHHHHHHHHhCCCCeEEEEEEccCCc
Confidence 01257999999853211 123345666779999999998753332
Q ss_pred ------hhHHHHHHHHHHHh-ccceEEeeec--CCccEEEEEec
Q 004164 694 ------QATKDMVISRMKMV-FNHLFCLQLE--EDVNLVLFGLS 728 (771)
Q Consensus 694 ------~~~~~~v~~~l~~v-F~~v~~~~~~--~~~N~Vl~a~~ 728 (771)
.+..+.++..|++. |.-+-.+.++ +..+.+++|..
T Consensus 187 d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p~~~~h~~v~~~~ 230 (232)
T 3id6_C 187 DVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDKDHAIVLSKY 230 (232)
T ss_dssp ---CCSSSSTTHHHHHHHHTTEEEEEEEECTTTCSSCEEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHCCCEEEEEeccCCCcCceEEEEEEe
Confidence 12234566777764 6644444442 33566777654
No 389
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.46 E-value=1e-06 Score=94.26 Aligned_cols=120 Identities=15% Similarity=0.107 Sum_probs=84.5
Q ss_pred HHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc--CCCeEEEEcCCHHHHHHHHHHhhcCC-CCcEEEEeecCCCCCCC-
Q 004164 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQFMD- 132 (771)
Q Consensus 57 l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~--g~~~V~~vDiS~~~i~~~~~~~~~~~-~~i~~~~~D~~~l~~~~- 132 (771)
+..++.. .++.+|||+|||+|..+..++.. +.+.|+++|+++.+++.++++....+ .+++++++|+.+++...
T Consensus 94 ~~~~l~~---~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~ 170 (309)
T 2b9e_A 94 PAMLLDP---PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDP 170 (309)
T ss_dssp HHHHHCC---CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCG
T ss_pred HHHHhCC---CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCcccc
Confidence 3444543 57899999999999999999885 34689999999999998887776554 57999999998875332
Q ss_pred --CCccEEEec------cccccccCcc-------cc----hHHHHHHHHHHHHccccCeEEEEEEcC
Q 004164 133 --ETFDVILDK------GGLDALMEPE-------LG----HKLGNQYLSEVKRLLKSGGKFVCLTLA 180 (771)
Q Consensus 133 --~sFDlVi~~------~~l~~l~~~~-------~~----~~~~~~~l~~i~rvLkpGG~~ii~~~~ 180 (771)
++||.|+.. |++..-++.. .. .....++|..+.++|+ ||+++..+.+
T Consensus 171 ~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 171 RYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp GGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred ccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 579999963 2232211110 00 0124567888888887 9999988765
No 390
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.46 E-value=6e-07 Score=99.10 Aligned_cols=135 Identities=14% Similarity=0.113 Sum_probs=92.9
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCC-CC-CeeEEEcchHHHHHhhccCCcccccccc
Q 004164 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ-DK-SLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 542 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~-~~-r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
..+||++|+|+|.++..+.... ..+|++||+++.+++.|++.+.... ++ +++++.+|+.+++.....
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~---------- 281 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARR---------- 281 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHH----------
T ss_pred CCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHH----------
Confidence 4689999999999999888753 3489999999999999999873211 23 799999999999876531
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcc--cHHHHHHHHHccCCCcEEEEEeccCChhHH
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV--EGSFLLTVKDALSEQGLFIVNLVSRSQATK 697 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~--~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~ 697 (771)
.+.+||+|++|.-....+.+. ..... -.+++..+.+.|+|||++++...+.... .
T Consensus 282 -------------------~~~~fD~Ii~DPP~~~~~~~~---~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~-~ 338 (385)
T 2b78_A 282 -------------------HHLTYDIIIIDPPSFARNKKE---VFSVSKDYHKLIRQGLEILSENGLIIASTNAANMT-V 338 (385)
T ss_dssp -------------------TTCCEEEEEECCCCC-----C---CCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC-H
T ss_pred -------------------hCCCccEEEECCCCCCCChhh---HHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC-H
Confidence 125799999975331100010 01111 1346788899999999999877554432 3
Q ss_pred HHHHHHHHHhccc
Q 004164 698 DMVISRMKMVFNH 710 (771)
Q Consensus 698 ~~v~~~l~~vF~~ 710 (771)
+.+.+.+++.+..
T Consensus 339 ~~~~~~i~~~~~~ 351 (385)
T 2b78_A 339 SQFKKQIEKGFGK 351 (385)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH
Confidence 4455666666543
No 391
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.45 E-value=1.4e-06 Score=90.70 Aligned_cols=106 Identities=17% Similarity=0.220 Sum_probs=81.0
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
....+||+||+|.|.++..+.... ..+|++||+++.+++.|++.+ |+ .++++++.+|+.+. .
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~----~-------- 124 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGL--ANRVTFSYADAMDL----P-------- 124 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSC----C--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEECccccC----C--------
Confidence 355799999999999999998876 469999999999999999887 43 45799999998652 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEecc
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 691 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 691 (771)
..+.+||+|+.- .....+ +. ...+|+.+++.|+|||.+++....
T Consensus 125 ---------------------~~~~~fD~v~~~----~~l~~~--~~----~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 125 ---------------------FEDASFDAVWAL----ESLHHM--PD----RGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp ---------------------SCTTCEEEEEEE----SCTTTS--SC----HHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred ---------------------CCCCCccEEEEe----chhhhC--CC----HHHHHHHHHHHcCCCeEEEEEEee
Confidence 113679999972 111111 11 278999999999999999986544
No 392
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.45 E-value=3.1e-07 Score=93.77 Aligned_cols=139 Identities=19% Similarity=0.179 Sum_probs=99.0
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
...+||+||+|.|.++..|....|..+|++||+||..++.|++.. |+ .++++++.+|+.+.+..
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl--~~~I~~~~gD~l~~~~~----------- 87 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGL--TSKIDVRLANGLSAFEE----------- 87 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTC--TTTEEEEECSGGGGCCG-----------
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECchhhcccc-----------
Confidence 457899999999999999999988789999999999999999886 54 56899999999886422
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHH
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 697 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~ 697 (771)
+.+||+|++ .||- .-+-.++|......|+++|.||+.-... .
T Consensus 88 ----------------------~~~~D~Ivi--------aGmG----g~lI~~IL~~~~~~l~~~~~lIlqp~~~----~ 129 (230)
T 3lec_A 88 ----------------------ADNIDTITI--------CGMG----GRLIADILNNDIDKLQHVKTLVLQPNNR----E 129 (230)
T ss_dssp ----------------------GGCCCEEEE--------EEEC----HHHHHHHHHHTGGGGTTCCEEEEEESSC----H
T ss_pred ----------------------ccccCEEEE--------eCCc----hHHHHHHHHHHHHHhCcCCEEEEECCCC----h
Confidence 136999987 1221 1134778999999999999999876433 2
Q ss_pred HHHHHHHHHh-ccceEEeeecC--CccEEEEEecCC
Q 004164 698 DMVISRMKMV-FNHLFCLQLEE--DVNLVLFGLSSE 730 (771)
Q Consensus 698 ~~v~~~l~~v-F~~v~~~~~~~--~~N~Vl~a~~~~ 730 (771)
+.+...|.+. |.-+-..-+.+ ..=+|+.+.+.+
T Consensus 130 ~~lr~~L~~~Gf~i~~E~lv~e~~~~Yeii~~~~~~ 165 (230)
T 3lec_A 130 DDLRKWLAANDFEIVAEDILTENDKRYEILVVKHGH 165 (230)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEC--CEEEEEEEEECC
T ss_pred HHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeCC
Confidence 3344445444 44222221222 234577776654
No 393
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.45 E-value=3.4e-06 Score=88.65 Aligned_cols=119 Identities=13% Similarity=0.124 Sum_probs=84.8
Q ss_pred CCCcEEEEeccc---cHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHH--HHhhccCCcccc
Q 004164 541 KSVKAVVIGLGA---GLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKF--VREMKSSSATDE 615 (771)
Q Consensus 541 ~~~~vLviGlG~---G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~--l~~~~~~~~~~~ 615 (771)
...+||+||+|. |.+...+....|..+|++||+||.|++.|++.+. ..++++++.+|..+. +-......
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~---- 150 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLA--KDPNTAVFTADVRDPEYILNHPDVR---- 150 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHT--TCTTEEEEECCTTCHHHHHHSHHHH----
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcC--CCCCeEEEEeeCCCchhhhccchhh----
Confidence 346899999999 9888888888898999999999999999999884 356899999999753 21100000
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCC
Q 004164 616 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 693 (771)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 693 (771)
. .....+||+|++- .. +..-+.. --..+|+.+++.|+|||.|++.....+
T Consensus 151 -~-------------------~~d~~~~d~v~~~--~v-----lh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~~~~ 200 (274)
T 2qe6_A 151 -R-------------------MIDFSRPAAIMLV--GM-----LHYLSPD-VVDRVVGAYRDALAPGSYLFMTSLVDT 200 (274)
T ss_dssp -H-------------------HCCTTSCCEEEET--TT-----GGGSCTT-THHHHHHHHHHHSCTTCEEEEEEEBCS
T ss_pred -c-------------------cCCCCCCEEEEEe--ch-----hhhCCcH-HHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence 0 0001469999871 11 1100111 236899999999999999998877654
No 394
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.45 E-value=5.8e-07 Score=93.23 Aligned_cols=76 Identities=8% Similarity=0.176 Sum_probs=62.4
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCC
Q 004164 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQF 130 (771)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~ 130 (771)
..+...+.+.+.. .++.+|||+|||+|.++..|++.|..+|+++|+++.+++.++++ ...+++++++|+.++++
T Consensus 17 ~~i~~~iv~~~~~---~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~---~~~~v~~i~~D~~~~~~ 90 (249)
T 3ftd_A 17 EGVLKKIAEELNI---EEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI---GDERLEVINEDASKFPF 90 (249)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS---CCTTEEEECSCTTTCCG
T ss_pred HHHHHHHHHhcCC---CCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc---cCCCeEEEEcchhhCCh
Confidence 4555666666654 57889999999999999999998756999999999999877554 34679999999999887
Q ss_pred CC
Q 004164 131 MD 132 (771)
Q Consensus 131 ~~ 132 (771)
++
T Consensus 91 ~~ 92 (249)
T 3ftd_A 91 CS 92 (249)
T ss_dssp GG
T ss_pred hH
Confidence 64
No 395
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.45 E-value=7.3e-07 Score=93.46 Aligned_cols=103 Identities=15% Similarity=0.243 Sum_probs=79.8
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
....+||+||+|+|.++..+.. +..+|++||+++.+++.|++.+ ++++++++|+.++ .
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~----~----------- 113 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNF----R----------- 113 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTC----C-----------
T ss_pred CCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhC----C-----------
Confidence 3457899999999999998888 6679999999999999999886 4688999988652 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCC
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 693 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 693 (771)
. ...||+|++.. . ...+. --..+|+.+++.|+|||.+++......
T Consensus 114 ------------------~-~~~fD~v~~~~--~--l~~~~------d~~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 114 ------------------V-DKPLDAVFSNA--M--LHWVK------EPEAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp ------------------C-SSCEEEEEEES--C--GGGCS------CHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred ------------------c-CCCcCEEEEcc--h--hhhCc------CHHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 0 25799999832 1 00010 125799999999999999999876553
No 396
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.45 E-value=5.3e-07 Score=91.62 Aligned_cols=106 Identities=14% Similarity=0.157 Sum_probs=78.3
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
....+||+||+|+|.++..|....+ ++++||+++.+++.|++.+ ++++++.+|..++ .
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~----~----------- 96 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL-----PDATLHQGDMRDF----R----------- 96 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTC----C-----------
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHc----c-----------
Confidence 3457899999999999998888865 8999999999999999986 3589999988653 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
. ...||+|++-.+.-. .+. .+. --..+|+.+++.|+|||.+++..+..
T Consensus 97 ------------------~-~~~~D~v~~~~~~~~---~~~-~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 97 ------------------L-GRKFSAVVSMFSSVG---YLK-TTE--ELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp ------------------C-SSCEEEEEECTTGGG---GCC-SHH--HHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred ------------------c-CCCCcEEEEcCchHh---hcC-CHH--HHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 0 257999995211100 000 001 12679999999999999999876443
No 397
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.45 E-value=2.8e-07 Score=97.78 Aligned_cols=110 Identities=20% Similarity=0.212 Sum_probs=82.8
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhcCCC--CCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFT--QDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiD~~v~~vA~~~Fg~~--~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
....+||+||+|.|.++..|...+ +..+|++||+++.+++.|++.+... ..++++++++|+.++-....
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-------- 106 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGA-------- 106 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCT--------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCcccc--------
Confidence 356799999999999999999887 7889999999999999999986321 24689999999865411100
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEE
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIV 687 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~ 687 (771)
......+||+|++.. . -..+--..+|+.+++.|+|||.|++
T Consensus 107 -------------------~~~~~~~fD~V~~~~--~---------l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 107 -------------------DSVDKQKIDMITAVE--C---------AHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp -------------------TTTTSSCEEEEEEES--C---------GGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred -------------------ccccCCCeeEEeHhh--H---------HHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 000125799999832 1 1112337899999999999999998
No 398
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.44 E-value=1.9e-07 Score=94.68 Aligned_cols=106 Identities=16% Similarity=0.206 Sum_probs=79.5
Q ss_pred CCCcEEEEeccccHHHHHHHHhC-----CCCcEEEEEcCHHHHHHHHhhcCCCC-----CCCeeEEEcchHHHHHhhccC
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECM-----PFVGIEAVELDLTMLNLAEDYFGFTQ-----DKSLKVHITDGIKFVREMKSS 610 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~-----p~~~i~~VEiD~~v~~vA~~~Fg~~~-----~~r~~v~i~Dg~~~l~~~~~~ 610 (771)
...+||+||+|+|.++..+.... |..+|++||+++.+++.|++.+.-.. .++++++.+|+.+.......
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~- 158 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK- 158 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH-
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc-
Confidence 45789999999999999888876 45699999999999999999873111 35799999999874211000
Q ss_pred CcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEec
Q 004164 611 SATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 690 (771)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 690 (771)
....||+|+++.... . +++.+.+.|+|||.+++.+.
T Consensus 159 ----------------------------~~~~fD~I~~~~~~~-----------~-----~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 159 ----------------------------ELGLFDAIHVGASAS-----------E-----LPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp ----------------------------HHCCEEEEEECSBBS-----------S-----CCHHHHHHEEEEEEEEEEEE
T ss_pred ----------------------------cCCCcCEEEECCchH-----------H-----HHHHHHHhcCCCcEEEEEEc
Confidence 014699999853211 1 24788999999999999886
Q ss_pred c
Q 004164 691 S 691 (771)
Q Consensus 691 ~ 691 (771)
.
T Consensus 195 ~ 195 (227)
T 2pbf_A 195 E 195 (227)
T ss_dssp E
T ss_pred c
Confidence 5
No 399
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.44 E-value=5.5e-07 Score=96.25 Aligned_cols=110 Identities=15% Similarity=0.089 Sum_probs=82.0
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-CCCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~-~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
....+||+||+|.|.++..+...+ ..+|++||+++.+++.|++.+.- ...++++++.+|..++ .
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~---------- 153 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF----A---------- 153 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC----C----------
T ss_pred CCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC----C----------
Confidence 345689999999999998888876 35999999999999999998721 1246799999997543 1
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCCh
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQ 694 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~ 694 (771)
..||+|+..- . ...+ |+. --..+|+.+.+.|+|||.+++..+....
T Consensus 154 ----------------------~~fD~v~~~~--~--l~~~--~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 154 ----------------------EPVDRIVSIE--A--FEHF--GHE--NYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp ----------------------CCCSEEEEES--C--GGGT--CGG--GHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred ----------------------CCcCEEEEeC--h--HHhc--CHH--HHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 4699999731 0 0000 111 1278999999999999999998766543
No 400
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.44 E-value=1.2e-06 Score=96.82 Aligned_cols=108 Identities=12% Similarity=0.138 Sum_probs=80.1
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 542 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
..+||++|+|+|..+..+.... ..|++||+++.+++.|++.+ |+. .+++.+|+.+++....
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~g--a~V~avDis~~al~~a~~n~~~ng~~----~~~~~~D~~~~l~~~~---------- 278 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKG--AYALAVDKDLEALGVLDQAALRLGLR----VDIRHGEALPTLRGLE---------- 278 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHTCC----CEEEESCHHHHHHTCC----------
T ss_pred CCeEEEcccchhHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHhCCC----CcEEEccHHHHHHHhc----------
Confidence 5789999999999999888863 45999999999999999987 442 2567999999987643
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCc-----ccHHHHHHHHHccCCCcEEEEEeccCC
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF-----VEGSFLLTVKDALSEQGLFIVNLVSRS 693 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f-----~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 693 (771)
+. ||+|++|.-.-.. ..... .-.++++.+.+.|+|||+|++-..+..
T Consensus 279 ---------------------~~-fD~Ii~dpP~f~~------~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 279 ---------------------GP-FHHVLLDPPTLVK------RPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp ---------------------CC-EEEEEECCCCCCS------SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred ---------------------CC-CCEEEECCCcCCC------CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 24 9999997422100 01111 114788999999999999996554443
No 401
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.44 E-value=1.2e-06 Score=96.62 Aligned_cols=115 Identities=18% Similarity=0.215 Sum_probs=85.4
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccccc
Q 004164 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHG 621 (771)
Q Consensus 542 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~ 621 (771)
..+||++|+|+|.++..+... ..+|++||+++.+++.|++.+....-+.++++.+|+.+++.....
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~------------ 275 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEK------------ 275 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHH------------
T ss_pred CCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHh------------
Confidence 368999999999999988887 458999999999999999987332112399999999999876531
Q ss_pred cccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCc-----ccHHHHHHHHHccCCCcEEEEEeccCC
Q 004164 622 NEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF-----VEGSFLLTVKDALSEQGLFIVNLVSRS 693 (771)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f-----~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 693 (771)
.+.+||+|++|.-.-..+ .... .-.+++..+.+.|+|||++++...+..
T Consensus 276 -----------------~~~~fD~Ii~dpP~~~~~------~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 276 -----------------EGERFDLVVLDPPAFAKG------KKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp -----------------TTCCEEEEEECCCCSCCS------TTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred -----------------cCCCeeEEEECCCCCCCC------hhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 125799999965221000 1111 125688999999999999998765543
No 402
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.43 E-value=7.9e-07 Score=92.18 Aligned_cols=99 Identities=18% Similarity=0.205 Sum_probs=77.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
+.+.+||+||+|+|.++..|.... .+|++||+++.+++.|++.+. +++++.+|..++ .
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~-----~~~~~~~d~~~~----~----------- 106 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNP-----DAVLHHGDMRDF----S----------- 106 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCT-----TSEEEECCTTTC----C-----------
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCC-----CCEEEECChHHC----C-----------
Confidence 345799999999999999888875 489999999999999999864 689999998663 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCc----ccHHHHHHHHHccCCCcEEEEEe
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF----VEGSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f----~~~~fl~~~~~~L~~~Gilv~Nl 689 (771)
. ..+||+|++..+. -..+ --..+|+.+++.|+|||.|++..
T Consensus 107 ------------------~-~~~fD~v~~~~~~----------l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 107 ------------------L-GRRFSAVTCMFSS----------IGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp ------------------C-SCCEEEEEECTTG----------GGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred ------------------c-cCCcCEEEEcCch----------hhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 0 2679999983211 1112 12478999999999999999863
No 403
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.43 E-value=3e-07 Score=93.68 Aligned_cols=107 Identities=14% Similarity=0.172 Sum_probs=79.8
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-CCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 542 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~-~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
+.+||+||+|+|.++..|.. +..+|++||+++.+++.|++.+.- ....+++++.+|..++.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---------------- 128 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR---------------- 128 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC----------------
T ss_pred CCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC----------------
Confidence 35999999999999888866 456899999999999999999853 12457999999987631
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
....||+|+.-. . ...+ |+. .-..+++.+++.|+|||.|++.....
T Consensus 129 ------------------~~~~fD~v~~~~--~--l~~~--~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 129 ------------------PTELFDLIFDYV--F--FCAI--EPE--MRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp ------------------CSSCEEEEEEES--S--TTTS--CGG--GHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred ------------------CCCCeeEEEECh--h--hhcC--CHH--HHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 124799999721 1 1111 111 23689999999999999999866543
No 404
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.43 E-value=9.3e-07 Score=88.40 Aligned_cols=120 Identities=14% Similarity=0.098 Sum_probs=87.8
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||+||+|.|.++..+... ..+|++||+++.+++.|++.+ +++++.+|..+.-
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~---------------- 98 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRL------GRPVRTMLFHQLD---------------- 98 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH------TSCCEECCGGGCC----------------
T ss_pred CCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhc------CCceEEeeeccCC----------------
Confidence 4578999999999999988887 359999999999999999987 3567778875431
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCc---ccHHHHHHHHHccCCCcEEEEEeccCChh--
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF---VEGSFLLTVKDALSEQGLFIVNLVSRSQA-- 695 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f---~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~-- 695 (771)
...+||+|++.. . -..+ --..+|+.+++.|+|||.+++........
T Consensus 99 ------------------~~~~fD~v~~~~--~---------l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 149 (211)
T 3e23_A 99 ------------------AIDAYDAVWAHA--C---------LLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGR 149 (211)
T ss_dssp ------------------CCSCEEEEEECS--C---------GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEE
T ss_pred ------------------CCCcEEEEEecC--c---------hhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccc
Confidence 136799999821 1 1111 12579999999999999999987544321
Q ss_pred ----------HHHHHHHHHHHh--ccceEE
Q 004164 696 ----------TKDMVISRMKMV--FNHLFC 713 (771)
Q Consensus 696 ----------~~~~v~~~l~~v--F~~v~~ 713 (771)
..+.+.+.+++. |..+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~ 179 (211)
T 3e23_A 150 DKLARYYNYPSEEWLRARYAEAGTWASVAV 179 (211)
T ss_dssp CTTSCEECCCCHHHHHHHHHHHCCCSEEEE
T ss_pred cccchhccCCCHHHHHHHHHhCCCcEEEEE
Confidence 235566677766 765443
No 405
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.43 E-value=4.6e-07 Score=95.41 Aligned_cols=107 Identities=21% Similarity=0.215 Sum_probs=83.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCC-CcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPF-VGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~-~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
..+.+||+||+|+|.++..+...+|. .+|++||++|.+++.|++.+.- ...+++++++|+.++ .
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~-~~~~v~~~~~d~~~~----~---------- 85 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRL-LPYDSEFLEGDATEI----E---------- 85 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHS-SSSEEEEEESCTTTC----C----------
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHh-cCCceEEEEcchhhc----C----------
Confidence 45689999999999999999999884 7999999999999999998743 123799999998753 1
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEecc
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 691 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 691 (771)
. ..+||+|++...-. .+ +. ...+|+.+++.|+|||.+++....
T Consensus 86 -------------------~-~~~fD~v~~~~~l~----~~----~~--~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 86 -------------------L-NDKYDIAICHAFLL----HM----TT--PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp -------------------C-SSCEEEEEEESCGG----GC----SS--HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -------------------c-CCCeeEEEECChhh----cC----CC--HHHHHHHHHHHcCCCCEEEEEecc
Confidence 0 25799999843111 01 11 168999999999999999976543
No 406
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.43 E-value=5.9e-07 Score=101.22 Aligned_cols=133 Identities=17% Similarity=0.191 Sum_probs=97.1
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCC-CcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPF-VGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~-~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
...+||++|+|.|..+..|...+++ .+|+++|+++..++.+++.+ |+ ++++++.+|+.++....
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~---~~v~~~~~D~~~~~~~~--------- 326 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI---KIVKPLVKDARKAPEII--------- 326 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC---CSEEEECSCTTCCSSSS---------
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC---CcEEEEEcChhhcchhh---------
Confidence 4468999999999999999998876 79999999999999999886 54 36899999986541111
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCc--------------ccHHHHHHHHHccCCC
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF--------------VEGSFLLTVKDALSEQ 682 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f--------------~~~~fl~~~~~~L~~~ 682 (771)
.+..||+|++|+-.+. .|+....+.. +...+|+.+.+.|+||
T Consensus 327 ----------------------~~~~fD~Vl~D~Pcsg--~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG 382 (450)
T 2yxl_A 327 ----------------------GEEVADKVLLDAPCTS--SGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPG 382 (450)
T ss_dssp ----------------------CSSCEEEEEEECCCCC--GGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEE
T ss_pred ----------------------ccCCCCEEEEcCCCCC--CeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 1256999999874331 1221111111 1267899999999999
Q ss_pred cEEEEEeccCChhHHHHHHHHHHHhcc
Q 004164 683 GLFIVNLVSRSQATKDMVISRMKMVFN 709 (771)
Q Consensus 683 Gilv~Nl~~~~~~~~~~v~~~l~~vF~ 709 (771)
|.|++-..+..++..+.++..+.+-++
T Consensus 383 G~lvy~tcs~~~~ene~~v~~~l~~~~ 409 (450)
T 2yxl_A 383 GRLLYTTCSIFKEENEKNIRWFLNVHP 409 (450)
T ss_dssp EEEEEEESCCCGGGTHHHHHHHHHHCS
T ss_pred cEEEEEeCCCChhhHHHHHHHHHHhCC
Confidence 999988777776666666766555544
No 407
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.43 E-value=1.5e-06 Score=86.21 Aligned_cols=146 Identities=12% Similarity=0.088 Sum_probs=95.7
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHH-----HHhhccCCcccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKF-----VREMKSSSATDE 615 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~-----l~~~~~~~~~~~ 615 (771)
...+||+||+|+|.++..+.+. ..+|++||++|.. ..++++++.+|..+. +.+.-.
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~~~~~~~~------ 85 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFDDIDRALR------ 85 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHHHHHHHH------
T ss_pred CCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc-----------cCCCeEEEEccccCHHHHHHHHHHhh------
Confidence 4578999999999999999888 5699999999851 135799999997542 111100
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCc---CcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 616 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAA---DFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~---~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
.....+||+|+.|.... ..|...... .-+-...++.+.+.|+|||.|++-+...
T Consensus 86 ---------------------~~~~~~~D~Vlsd~~~~--~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 86 ---------------------EEGIEKVDDVVSDAMAK--VSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp ---------------------HHTCSSEEEEEECCCCC--CCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ---------------------cccCCcceEEecCCCcC--CCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 00013799999986321 112110000 0012467888999999999999988654
Q ss_pred ChhHHHHHHHHHHHhccceEEeeec----CCccEEEEEecCC
Q 004164 693 SQATKDMVISRMKMVFNHLFCLQLE----EDVNLVLFGLSSE 730 (771)
Q Consensus 693 ~~~~~~~v~~~l~~vF~~v~~~~~~----~~~N~Vl~a~~~~ 730 (771)
.. ...++..++..|..|...+.. +.....++|.+-.
T Consensus 143 ~~--~~~~~~~l~~~F~~v~~~kP~asR~~s~E~y~v~~~~~ 182 (191)
T 3dou_A 143 DM--TNDFIAIWRKNFSSYKISKPPASRGSSSEIYIMFFGFK 182 (191)
T ss_dssp TH--HHHHHHHHGGGEEEEEEECC------CCEEEEEEEEEC
T ss_pred CC--HHHHHHHHHHhcCEEEEECCCCccCCCceEEEEEeeec
Confidence 33 356788899999998877642 2344566676543
No 408
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.42 E-value=1e-06 Score=90.24 Aligned_cols=112 Identities=13% Similarity=0.211 Sum_probs=81.9
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
....+||+||+|+|.++..|....+ +|++||+++.+++.|++.+. ..+++++++|..+.-....-
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~~---------- 119 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT---AANISYRLLDGLVPEQAAQI---------- 119 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC---CTTEEEEECCTTCHHHHHHH----------
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc---ccCceEEECccccccccccc----------
Confidence 3457899999999999999999876 89999999999999999984 35899999999875332110
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
. ....||+|+....-.. + ++.. -..+|+.+++.|+|||.+++.-+..
T Consensus 120 ~------------------~~~~~d~v~~~~~~~~----~--~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 120 H------------------SEIGDANIYMRTGFHH----I--PVEK--RELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp H------------------HHHCSCEEEEESSSTT----S--CGGG--HHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred c------------------cccCccEEEEcchhhc----C--CHHH--HHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 0 0124899998531110 0 1111 2689999999999999876654444
No 409
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.42 E-value=5.8e-07 Score=92.04 Aligned_cols=105 Identities=13% Similarity=0.171 Sum_probs=78.1
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
....+||+||+|+|.++..+....+ ++++||+++.+++.|++.+.-..-++++++.+|+.++ .
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~----------- 82 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL----P----------- 82 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC----C-----------
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccC----C-----------
Confidence 4567999999999999999988864 8999999999999999886211114699999987542 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEe
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 689 (771)
..+..||+|+...-- ..+ . --..+|+.+++.|+|||.+++-.
T Consensus 83 ------------------~~~~~fD~v~~~~~l----~~~----~--~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 83 ------------------FPDDSFDIITCRYAA----HHF----S--DVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp ------------------SCTTCEEEEEEESCG----GGC----S--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------CCCCcEEEEEECCch----hhc----c--CHHHHHHHHHHHcCCCcEEEEEE
Confidence 113679999984211 001 0 12689999999999999998743
No 410
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.41 E-value=1.2e-06 Score=96.94 Aligned_cols=117 Identities=8% Similarity=0.105 Sum_probs=86.1
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCC-CCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ-DKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~-~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
...+||++|+|+|.++..+... +..+|++||+++.+++.|++.+.... +++++++.+|+.+++.....
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~---------- 285 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQK---------- 285 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH----------
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHh----------
Confidence 4578999999999999988886 44589999999999999999883211 23799999999999876431
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCc-----ccHHHHHHHHHccCCCcEEEEEeccCC
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF-----VEGSFLLTVKDALSEQGLFIVNLVSRS 693 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f-----~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 693 (771)
.+.+||+|++|.-.- +. ..... .-.+++..+.+.|+|||++++...+..
T Consensus 286 -------------------~~~~fD~Vi~dpP~~----~~--~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 286 -------------------KGEKFDIVVLDPPAF----VQ--HEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp -------------------TTCCEEEEEECCCCS----CS--SGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred -------------------hCCCCCEEEECCCCC----CC--CHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 125799999964211 00 01111 135688999999999999887765543
No 411
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.41 E-value=5.9e-07 Score=92.71 Aligned_cols=104 Identities=16% Similarity=0.137 Sum_probs=79.0
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
....+||+||+|+|.++..+... ..+|++||+++.+++.|++.+ -...++++++++|+.++ .
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~----~----------- 99 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAI----P----------- 99 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSC----C-----------
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccC----C-----------
Confidence 34578999999999998888876 368999999999999999998 22356899999998542 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEe
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 689 (771)
..+..||+|++.. . ...+ + -...+|+.+++.|+|||.+++..
T Consensus 100 ------------------~~~~~fD~v~~~~--~--l~~~---~---~~~~~l~~~~~~L~pgG~l~~~~ 141 (263)
T 2yqz_A 100 ------------------LPDESVHGVIVVH--L--WHLV---P---DWPKVLAEAIRVLKPGGALLEGW 141 (263)
T ss_dssp ------------------SCTTCEEEEEEES--C--GGGC---T---THHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------CCCCCeeEEEECC--c--hhhc---C---CHHHHHHHHHHHCCCCcEEEEEe
Confidence 1136799999831 1 0001 1 12689999999999999999873
No 412
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.40 E-value=1.3e-06 Score=94.03 Aligned_cols=102 Identities=16% Similarity=0.079 Sum_probs=79.7
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-CCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~-~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
...+||+||+|+|.++..+.+.+|..+++++|+ |.+++.|++++.- ...++++++.+|..+ ...
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~p----------- 233 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD---PLP----------- 233 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS---CCC-----------
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC---CCC-----------
Confidence 457899999999999999999999999999999 9999999998721 124789999999752 211
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCccc---HHHHHHHHHccCCCcEEEEEe
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~---~~fl~~~~~~L~~~Gilv~Nl 689 (771)
..||+|++- .. -..+-+ ..+|+++++.|+|||.+++.-
T Consensus 234 ---------------------~~~D~v~~~--~v---------lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 234 ---------------------AGAGGYVLS--AV---------LHDWDDLSAVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp ---------------------CSCSEEEEE--SC---------GGGSCHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred ---------------------CCCcEEEEe--hh---------hccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 269999981 11 112222 579999999999999998754
No 413
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.40 E-value=1e-06 Score=92.60 Aligned_cols=109 Identities=14% Similarity=0.139 Sum_probs=80.7
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-CCCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~-~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
....+||+||+|.|.++..+...++. +|++||+++.+++.|++.+.- ...++++++.+|..++ .
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~---------- 127 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF----D---------- 127 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC----C----------
T ss_pred CCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC----C----------
Confidence 34568999999999999988866554 999999999999999998621 1246899999997432 1
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCC
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 693 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 693 (771)
.+||+|+..- . ...+ ++. --..+|+.+++.|+|||.+++......
T Consensus 128 ----------------------~~fD~v~~~~--~--l~~~--~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 128 ----------------------EPVDRIVSIG--A--FEHF--GHE--RYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp ----------------------CCCSEEEEES--C--GGGT--CTT--THHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred ----------------------CCeeEEEEeC--c--hhhc--ChH--HHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 4699999731 0 0000 111 127899999999999999998776543
No 414
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.40 E-value=8.8e-07 Score=90.97 Aligned_cols=106 Identities=16% Similarity=0.123 Sum_probs=79.3
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
....+||+||+|+|.++..|.... ..+|++||+++.+++.|++.+.- .++++++.+|..++ .
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~----~----------- 153 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAG--MPVGKFILASMETA----T----------- 153 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTT--SSEEEEEESCGGGC----C-----------
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhcc--CCceEEEEccHHHC----C-----------
Confidence 356799999999999998887775 45799999999999999999853 26799999998653 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEe
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 689 (771)
.....||+|++-- . ...+ |+. --..+|+.+++.|+|||.|++-.
T Consensus 154 ------------------~~~~~fD~v~~~~--~--l~~~--~~~--~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 154 ------------------LPPNTYDLIVIQW--T--AIYL--TDA--DFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp ------------------CCSSCEEEEEEES--C--GGGS--CHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------CCCCCeEEEEEcc--h--hhhC--CHH--HHHHHHHHHHHhcCCCeEEEEEe
Confidence 1135799999721 1 0000 001 12689999999999999999855
No 415
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.40 E-value=4.1e-07 Score=96.42 Aligned_cols=106 Identities=16% Similarity=0.215 Sum_probs=81.4
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCC---CCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ---DKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~---~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
.+.+||+||+|+|.++..|... ..+|++||+++.+++.|++.+.-.. ..+++++.+|..++ .
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~----~--------- 146 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF----A--------- 146 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC----C---------
T ss_pred CCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC----C---------
Confidence 3459999999999998888887 3689999999999999999874211 16799999998753 1
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCccc----HHHHHHHHHccCCCcEEEEEeccCC
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE----GSFLLTVKDALSEQGLFIVNLVSRS 693 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~----~~fl~~~~~~L~~~Gilv~Nl~~~~ 693 (771)
....||+|++... ..++++ ..+|+.+++.|+|||.|++.+....
T Consensus 147 ---------------------~~~~fD~v~~~~~-----------~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 147 ---------------------LDKRFGTVVISSG-----------SINELDEADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp ---------------------CSCCEEEEEECHH-----------HHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred ---------------------cCCCcCEEEECCc-----------ccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 0267999986211 111222 7899999999999999999887654
No 416
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.39 E-value=1e-06 Score=89.74 Aligned_cols=103 Identities=19% Similarity=0.166 Sum_probs=79.3
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||+||+|+|.++..+.... ..++++||+++.+++.|++.+.- .+++++.+|..+.- .
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~--~------------- 103 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHG-ASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLH--L------------- 103 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCC--C-------------
T ss_pred CCCEEEEEcCcCCHHHHHHHHCC-CCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhcc--C-------------
Confidence 45789999999999999888873 23899999999999999998753 47999999986531 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEec
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 690 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 690 (771)
....||+|++.. . ...+ + --..+|+.+++.|+|||.+++...
T Consensus 104 ------------------~~~~fD~v~~~~--~--l~~~----~--~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 104 ------------------PQDSFDLAYSSL--A--LHYV----E--DVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp ------------------CTTCEEEEEEES--C--GGGC----S--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ------------------CCCCceEEEEec--c--cccc----c--hHHHHHHHHHHhcCcCcEEEEEeC
Confidence 136799999832 1 0111 1 136899999999999999998763
No 417
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.39 E-value=7.1e-07 Score=98.18 Aligned_cols=102 Identities=12% Similarity=0.092 Sum_probs=83.0
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC---------------CCCCeeEEEcchHHHHHh
Q 004164 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT---------------QDKSLKVHITDGIKFVRE 606 (771)
Q Consensus 542 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~---------------~~~r~~v~i~Dg~~~l~~ 606 (771)
..+||++|+|+|.++..+....+..+|++||+|+..++.|++..... .-+.++++.+|+.+++..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 46899999999999999998877778999999999999999876221 112399999999999876
Q ss_pred hccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEE
Q 004164 607 MKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFI 686 (771)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv 686 (771)
.. .+||+|++|.+.. ..+|++.+.+.|+++|++.
T Consensus 128 ~~--------------------------------~~fD~I~lDP~~~--------------~~~~l~~a~~~lk~gG~l~ 161 (378)
T 2dul_A 128 RH--------------------------------RYFHFIDLDPFGS--------------PMEFLDTALRSAKRRGILG 161 (378)
T ss_dssp ST--------------------------------TCEEEEEECCSSC--------------CHHHHHHHHHHEEEEEEEE
T ss_pred cc--------------------------------CCCCEEEeCCCCC--------------HHHHHHHHHHhcCCCCEEE
Confidence 42 4699999864321 1689999999999999988
Q ss_pred EEe
Q 004164 687 VNL 689 (771)
Q Consensus 687 ~Nl 689 (771)
+..
T Consensus 162 vt~ 164 (378)
T 2dul_A 162 VTA 164 (378)
T ss_dssp EEE
T ss_pred EEe
Confidence 764
No 418
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.38 E-value=1.2e-06 Score=88.47 Aligned_cols=108 Identities=10% Similarity=0.163 Sum_probs=81.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-----CCCCeeEEEcchHHHHHhhccCCccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-----QDKSLKVHITDGIKFVREMKSSSATD 614 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~-----~~~r~~v~i~Dg~~~l~~~~~~~~~~ 614 (771)
....+||+||+|.|.++..+... ..+|++||+++.+++.|++.+.-. ...+++++.+|+.++ .
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~----~------ 96 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL----S------ 96 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC----C------
T ss_pred CCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc----C------
Confidence 34578999999999999988887 469999999999999999987421 124689999987543 1
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCccc----HHHHHHHHHccCCCcEEEEEec
Q 004164 615 EMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE----GSFLLTVKDALSEQGLFIVNLV 690 (771)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~----~~fl~~~~~~L~~~Gilv~Nl~ 690 (771)
.....||+|++.. . -..+.+ ..+|+.+++.|+|||.+++...
T Consensus 97 -----------------------~~~~~~D~v~~~~--~---------l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 97 -----------------------FHDSSFDFAVMQA--F---------LTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp -----------------------SCTTCEEEEEEES--C---------GGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -----------------------CCCCceeEEEEcc--h---------hhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 1136799999831 1 111222 2799999999999999998766
Q ss_pred cCC
Q 004164 691 SRS 693 (771)
Q Consensus 691 ~~~ 693 (771)
.+.
T Consensus 143 ~~~ 145 (235)
T 3sm3_A 143 GQN 145 (235)
T ss_dssp BCC
T ss_pred Ccc
Confidence 553
No 419
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.38 E-value=1.9e-06 Score=83.65 Aligned_cols=137 Identities=12% Similarity=0.160 Sum_probs=89.2
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||+||+|+|.++..|.... +|++||+++.+++. .++++++.+|+.+.+.
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~---------~~~~~~~~~d~~~~~~--------------- 75 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES---------HRGGNLVRADLLCSIN--------------- 75 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT---------CSSSCEEECSTTTTBC---------------
T ss_pred CCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc---------ccCCeEEECChhhhcc---------------
Confidence 34699999999999999998876 89999999999988 3578999999876311
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcC---CcCcccHHHHHHHHHccCCCcEEEEEeccCChhHH
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCP---AADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 697 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~p---p~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~ 697 (771)
..+||+|+.+. + ......+ ...--..++++.+.+.| |||.+++-..... ..
T Consensus 76 -------------------~~~fD~i~~n~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~--~~ 129 (170)
T 3q87_B 76 -------------------QESVDVVVFNP--P--YVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEAN--RP 129 (170)
T ss_dssp -------------------GGGCSEEEECC--C--CBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGG--CH
T ss_pred -------------------cCCCCEEEECC--C--CccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCC--CH
Confidence 25799999943 1 0000000 00011256888888888 9999998654332 23
Q ss_pred HHHHHHHHHh-ccceEEeeecCCccEEEEEecCC
Q 004164 698 DMVISRMKMV-FNHLFCLQLEEDVNLVLFGLSSE 730 (771)
Q Consensus 698 ~~v~~~l~~v-F~~v~~~~~~~~~N~Vl~a~~~~ 730 (771)
+.+.+.+++. |..+...........++.....+
T Consensus 130 ~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~~~~~ 163 (170)
T 3q87_B 130 KEVLARLEERGYGTRILKVRKILGETVYIIKGEK 163 (170)
T ss_dssp HHHHHHHHHTTCEEEEEEEEECSSSEEEEEEEEC
T ss_pred HHHHHHHHHCCCcEEEEEeeccCCceEEEEEEec
Confidence 3455666554 66544444344444555544433
No 420
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.38 E-value=1.1e-06 Score=98.27 Aligned_cols=132 Identities=16% Similarity=0.176 Sum_probs=96.8
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
...+||++|+|.|..+..+...++..+|+++|+++..++.+++.+ |+ +++++.+|+.++.....
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~----~~~~~~~D~~~~~~~~~--------- 312 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM----KATVKQGDGRYPSQWCG--------- 312 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC----CCEEEECCTTCTHHHHT---------
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC----CeEEEeCchhhchhhcc---------
Confidence 456899999999999999999988789999999999999999886 43 37899999987643322
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCc--------------ccHHHHHHHHHccCCCc
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF--------------VEGSFLLTVKDALSEQG 683 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f--------------~~~~fl~~~~~~L~~~G 683 (771)
+..||+|++|+-.+. .|+....+.. +...+|+.+.+.|+|||
T Consensus 313 ----------------------~~~fD~Vl~D~Pcsg--~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG 368 (429)
T 1sqg_A 313 ----------------------EQQFDRILLDAPCSA--TGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGG 368 (429)
T ss_dssp ----------------------TCCEEEEEEECCCCC--GGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEE
T ss_pred ----------------------cCCCCEEEEeCCCCc--ccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 257999999874331 1221111111 12588999999999999
Q ss_pred EEEEEeccCChhHHHHHHHHHHHhcc
Q 004164 684 LFIVNLVSRSQATKDMVISRMKMVFN 709 (771)
Q Consensus 684 ilv~Nl~~~~~~~~~~v~~~l~~vF~ 709 (771)
.+++...+-.+...+.++..+-+..+
T Consensus 369 ~lvystcs~~~~ene~~v~~~l~~~~ 394 (429)
T 1sqg_A 369 TLVYATCSVLPEENSLQIKAFLQRTA 394 (429)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHHHCT
T ss_pred EEEEEECCCChhhHHHHHHHHHHhCC
Confidence 99998766666555556655544444
No 421
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.37 E-value=2.1e-06 Score=84.96 Aligned_cols=163 Identities=14% Similarity=0.099 Sum_probs=92.8
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC--CCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMP--FVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p--~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
...+||+||+|+|.++..|...+| ..+|++||++|.. . .++++++.+|..+.....- ....-
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~--------~---~~~v~~~~~d~~~~~~~~~-----~~~~~ 85 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD--------P---IPNVYFIQGEIGKDNMNNI-----KNINY 85 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC--------C---CTTCEEEECCTTTTSSCCC----------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC--------C---CCCceEEEccccchhhhhh-----ccccc
Confidence 346899999999999999999987 6799999999931 1 2568889998865310000 00000
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcc-----cHHHHHHHHHccCCCcEEEEEeccCC
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV-----EGSFLLTVKDALSEQGLFIVNLVSRS 693 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~-----~~~fl~~~~~~L~~~Gilv~Nl~~~~ 693 (771)
+...... ........ ......||+|+.|..-. ..|.. ..... ...+++.+.+.|+|||.|++.++...
T Consensus 86 i~~~~~~-~~~~~~~~--~~~~~~fD~v~~~~~~~--~~g~~--~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 158 (201)
T 2plw_A 86 IDNMNNN-SVDYKLKE--ILQDKKIDIILSDAAVP--CIGNK--IDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGS 158 (201)
T ss_dssp ------C-HHHHHHHH--HHTTCCEEEEEECCCCC--CCSCH--HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred cccccch-hhHHHHHh--hcCCCcccEEEeCCCcC--CCCCc--ccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCC
Confidence 0000000 00000000 00135799999965211 11110 00000 12478899999999999999776533
Q ss_pred hhHHHHHHHHHHHhccceEEeeec----CCccEEEEEec
Q 004164 694 QATKDMVISRMKMVFNHLFCLQLE----EDVNLVLFGLS 728 (771)
Q Consensus 694 ~~~~~~v~~~l~~vF~~v~~~~~~----~~~N~Vl~a~~ 728 (771)
. ...+...++..|..+..++.. ......++|.+
T Consensus 159 ~--~~~l~~~l~~~f~~v~~~~~~~~r~~s~e~y~v~~~ 195 (201)
T 2plw_A 159 Q--TNNLKTYLKGMFQLVHTTKPKASRNESREIYLVCKN 195 (201)
T ss_dssp T--HHHHHHHHHTTEEEEEECCCC-----CCEEEEEEEE
T ss_pred C--HHHHHHHHHHHHheEEEECCcccCCcCceEEEEEec
Confidence 2 345677888889877665432 22334566654
No 422
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.37 E-value=3.4e-07 Score=92.75 Aligned_cols=103 Identities=14% Similarity=0.162 Sum_probs=77.8
Q ss_pred CCCcEEEEeccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhcCCC-----CCCCeeEEEcchHHHHHhhccCCccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFT-----QDKSLKVHITDGIKFVREMKSSSATD 614 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiD~~v~~vA~~~Fg~~-----~~~r~~v~i~Dg~~~l~~~~~~~~~~ 614 (771)
...+||+||+|+|.++..+...+ +..+|++||+++.+++.|++.+.-. ..++++++.+|+.....
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~--------- 147 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA--------- 147 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG---------
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc---------
Confidence 45689999999999999888775 5569999999999999999876210 13579999999863211
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 615 EMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
....||+|+++... .. +++.+.+.|+|||.+++.+.+.
T Consensus 148 ------------------------~~~~fD~i~~~~~~-----------~~-----~~~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 148 ------------------------EEAPYDAIHVGAAA-----------PV-----VPQALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp ------------------------GGCCEEEEEECSBB-----------SS-----CCHHHHHTEEEEEEEEEEESCT
T ss_pred ------------------------cCCCcCEEEECCch-----------HH-----HHHHHHHhcCCCcEEEEEEecC
Confidence 02469999985422 12 2468889999999999987654
No 423
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.37 E-value=7.5e-07 Score=95.13 Aligned_cols=106 Identities=12% Similarity=0.075 Sum_probs=81.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
....+||+||+|.|.++..|...+ ..+|++||+++.+++.|++.+ |+ .++++++.+|+.+. .
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~----~-------- 180 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRI--DDHVRSRVCNMLDT----P-------- 180 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSC----C--------
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCC--CCceEEEECChhcC----C--------
Confidence 456789999999999999888875 469999999999999999986 43 45899999998542 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
..+..||+|+.-- . + ..+--..+|+.+.+.|+|||.+++-....
T Consensus 181 ---------------------~~~~~fD~V~~~~--~-----l----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 181 ---------------------FDKGAVTASWNNE--S-----T----MYVDLHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp ---------------------CCTTCEEEEEEES--C-----G----GGSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred ---------------------CCCCCEeEEEECC--c-----h----hhCCHHHHHHHHHHHcCCCcEEEEEEccc
Confidence 1136799999721 1 1 11115889999999999999999765443
No 424
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.37 E-value=6.7e-07 Score=89.73 Aligned_cols=104 Identities=16% Similarity=0.114 Sum_probs=77.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
....+||+||+|+|.++..+.... |..+|++||+++.+++.|++.+.-..-++++++.+|+...+..
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~------------ 143 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEP------------ 143 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGG------------
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCC------------
Confidence 345689999999999988888876 5579999999999999999987211113599999998432111
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
...||+|+++..-. .+. +.+.+.|+|||.+++.+...
T Consensus 144 ---------------------~~~fD~v~~~~~~~-----------~~~-----~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 144 ---------------------LAPYDRIYTTAAGP-----------KIP-----EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp ---------------------GCCEEEEEESSBBS-----------SCC-----HHHHHTEEEEEEEEEEESSS
T ss_pred ---------------------CCCeeEEEECCchH-----------HHH-----HHHHHHcCCCcEEEEEECCC
Confidence 24699999843111 111 48899999999999988654
No 425
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.36 E-value=5.9e-07 Score=89.74 Aligned_cols=103 Identities=16% Similarity=0.161 Sum_probs=77.7
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||+||+|+|.++..+ +..++++||+++.+++.|++.+ ++++++.+|+.+. .
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~----~------------ 90 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEAL----P------------ 90 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSC----C------------
T ss_pred CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccC----C------------
Confidence 5578999999999987776 2238999999999999999987 4688888887542 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChh
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQA 695 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~ 695 (771)
..+.+||+|++.. . ...+. --..+|+.+++.|+|||.+++....+...
T Consensus 91 -----------------~~~~~fD~v~~~~--~--l~~~~------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~ 138 (211)
T 2gs9_A 91 -----------------FPGESFDVVLLFT--T--LEFVE------DVERVLLEARRVLRPGGALVVGVLEALSP 138 (211)
T ss_dssp -----------------SCSSCEEEEEEES--C--TTTCS------CHHHHHHHHHHHEEEEEEEEEEEECTTSH
T ss_pred -----------------CCCCcEEEEEEcC--h--hhhcC------CHHHHHHHHHHHcCCCCEEEEEecCCcCc
Confidence 1136799999842 1 11111 12689999999999999999988766543
No 426
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.36 E-value=5.7e-07 Score=91.71 Aligned_cols=107 Identities=19% Similarity=0.198 Sum_probs=76.0
Q ss_pred CCCcEEEEeccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
...+||+||+|+|.++.+|...+ |..+|++||++|.+++.+.+.... .++++++.+|+.+... ..
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~--~~~v~~~~~d~~~~~~-~~----------- 142 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK--RTNIIPVIEDARHPHK-YR----------- 142 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH--CTTEEEECSCTTCGGG-GG-----------
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc--cCCeEEEEcccCChhh-hc-----------
Confidence 45689999999999999998886 667999999998755444333211 1579999999876421 11
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEecc
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 691 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 691 (771)
....+||+|++|....+ ....++..+.+.|+|||.+++.+..
T Consensus 143 ------------------~~~~~~D~V~~~~~~~~------------~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 143 ------------------MLIAMVDVIFADVAQPD------------QTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp ------------------GGCCCEEEEEECCCCTT------------HHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred ------------------ccCCcEEEEEEcCCCcc------------HHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 01257999999653111 1245688899999999999986543
No 427
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.36 E-value=6.4e-07 Score=98.22 Aligned_cols=101 Identities=20% Similarity=0.271 Sum_probs=76.8
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
+.+.||+||+|+|.|++++.+... .+|.+||.++ +++.|++.. |+ +++++++.+|..++ +.
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA-~~V~ave~s~-~~~~a~~~~~~n~~--~~~i~~i~~~~~~~--~l---------- 146 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGA-RRVYAVEASA-IWQQAREVVRFNGL--EDRVHVLPGPVETV--EL---------- 146 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-SEEEEEECST-THHHHHHHHHHTTC--TTTEEEEESCTTTC--CC----------
T ss_pred CCCEEEEeCCCccHHHHHHHHhCC-CEEEEEeChH-HHHHHHHHHHHcCC--CceEEEEeeeeeee--cC----------
Confidence 346899999999999999988753 4899999997 788898876 44 67899999987654 11
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEE
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFI 686 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv 686 (771)
..++|+|+......- ...+-.-+.++....+.|+|||+++
T Consensus 147 ----------------------pe~~DvivsE~~~~~-------l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 147 ----------------------PEQVDAIVSEWMGYG-------LLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp ----------------------SSCEEEEECCCCBTT-------BTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred ----------------------CccccEEEeeccccc-------ccccchhhhHHHHHHhhCCCCceEC
Confidence 267999998653321 1222234788888899999999988
No 428
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.36 E-value=1.9e-06 Score=95.47 Aligned_cols=121 Identities=12% Similarity=0.089 Sum_probs=86.9
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCC--CCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ--DKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~--~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
...+||++|+|+|.++..+.... ..+|++||+++.+++.|++.+.... +++++++.+|+.+++.....
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~--------- 289 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRD--------- 289 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHH---------
T ss_pred CCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHh---------
Confidence 34689999999999999888864 4589999999999999999874321 22799999999999876531
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCC-CCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCC
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSS-SGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 693 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~-~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 693 (771)
.+.+||+|++|.-....+ ..+. ...-.-.+++..+.+.|+|+|++++...+..
T Consensus 290 --------------------~~~~fD~Ii~dpP~~~~~~~~~~--~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 343 (396)
T 3c0k_A 290 --------------------RGEKFDVIVMDPPKFVENKSQLM--GACRGYKDINMLAIQLLNEGGILLTFSCSGL 343 (396)
T ss_dssp --------------------TTCCEEEEEECCSSTTTCSSSSS--CCCTHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred --------------------cCCCCCEEEECCCCCCCChhHHH--HHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 125799999975221100 0000 0001125789999999999999998765543
No 429
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.36 E-value=5.3e-07 Score=88.83 Aligned_cols=104 Identities=13% Similarity=0.158 Sum_probs=76.6
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
.+.+||+||+|+|.++..+... ..++++||+++.+++.|++.+.-..-++++++.+|..++ .
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~------------ 93 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNL----T------------ 93 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGC----C------------
T ss_pred CCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhC----C------------
Confidence 4569999999999999988887 359999999999999999886321124699999998653 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEE
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 688 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~N 688 (771)
. ...||+|+... . ...+ ++. --..+++.+++.|+|||.+++-
T Consensus 94 -----------------~-~~~~D~v~~~~--~--l~~~--~~~--~~~~~l~~~~~~L~~gG~l~~~ 135 (199)
T 2xvm_A 94 -----------------F-DRQYDFILSTV--V--LMFL--EAK--TIPGLIANMQRCTKPGGYNLIV 135 (199)
T ss_dssp -----------------C-CCCEEEEEEES--C--GGGS--CGG--GHHHHHHHHHHTEEEEEEEEEE
T ss_pred -----------------C-CCCceEEEEcc--h--hhhC--CHH--HHHHHHHHHHHhcCCCeEEEEE
Confidence 1 25799999742 1 0000 111 1277999999999999997753
No 430
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.35 E-value=9.5e-07 Score=95.88 Aligned_cols=141 Identities=13% Similarity=0.149 Sum_probs=95.1
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccccc
Q 004164 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHG 621 (771)
Q Consensus 542 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~ 621 (771)
..+||+||+|+|.++..+....|..+|++||+++.+++.|++.+.. .+...+++.+|..++.
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~-~~~~~~~~~~d~~~~~----------------- 258 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAA-NGVEGEVFASNVFSEV----------------- 258 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHH-TTCCCEEEECSTTTTC-----------------
T ss_pred CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH-hCCCCEEEEccccccc-----------------
Confidence 4589999999999999999998888999999999999999998732 1223677888876541
Q ss_pred cccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHHHHHH
Q 004164 622 NEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMVI 701 (771)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~v~ 701 (771)
..+||+|+++. .-. .|+. ...-....+++.+++.|+|||.+++-.. +.... -
T Consensus 259 ------------------~~~fD~Iv~~~--~~~-~g~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~-~~~~~----~ 310 (343)
T 2pjd_A 259 ------------------KGRFDMIISNP--PFH-DGMQ--TSLDAAQTLIRGAVRHLNSGGELRIVAN-AFLPY----P 310 (343)
T ss_dssp ------------------CSCEEEEEECC--CCC-SSSH--HHHHHHHHHHHHHGGGEEEEEEEEEEEE-TTSSH----H
T ss_pred ------------------cCCeeEEEECC--Ccc-cCcc--CCHHHHHHHHHHHHHhCCCCcEEEEEEc-CCCCc----H
Confidence 25799999832 100 0100 0001136799999999999999987442 22221 2
Q ss_pred HHHHHhccceEEeeecCCccEEEEEecC
Q 004164 702 SRMKMVFNHLFCLQLEEDVNLVLFGLSS 729 (771)
Q Consensus 702 ~~l~~vF~~v~~~~~~~~~N~Vl~a~~~ 729 (771)
..+.+.|..+..+. .+..-.|+-+.+.
T Consensus 311 ~~l~~~f~~~~~~~-~~~gf~v~~~~k~ 337 (343)
T 2pjd_A 311 DVLDETFGFHEVIA-QTGRFKVYRAIMT 337 (343)
T ss_dssp HHHHHHHSCCEEEE-ECSSEEEEEEEC-
T ss_pred HHHHHhcCceEEEe-eCCCEEEEEEEeC
Confidence 45566787665544 3344556666543
No 431
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.35 E-value=1.1e-06 Score=95.48 Aligned_cols=103 Identities=17% Similarity=0.196 Sum_probs=77.1
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
....+||+||+|+|.++.++.+. +..+|++||+++ +++.|++.+ |+ .++++++.+|+.++ ..
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~~--~~~i~~~~~d~~~~--~~--------- 127 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNKL--EDTITLIKGKIEEV--HL--------- 127 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTTC--TTTEEEEESCTTTS--CC---------
T ss_pred cCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcCC--CCcEEEEEeeHHHh--cC---------
Confidence 45578999999999999999887 445999999997 899999886 33 46899999998754 11
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEE
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFI 686 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv 686 (771)
...+||+|+.+.-.. .+ ...-.-..+|..+.+.|+|||+++
T Consensus 128 ----------------------~~~~~D~Ivs~~~~~----~l---~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 128 ----------------------PVEKVDVIISEWMGY----FL---LFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp ----------------------SCSCEEEEEECCCBT----TB---TTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred ----------------------CCCcEEEEEEcCchh----hc---cCHHHHHHHHHHHHhhcCCCcEEE
Confidence 136799999853100 00 011112568999999999999998
No 432
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.35 E-value=1.1e-06 Score=95.74 Aligned_cols=106 Identities=18% Similarity=0.197 Sum_probs=78.8
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-CCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~-~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
...+||+||+|+|.++.++... +..+|++||+++ +++.|++...- ...++++++.+|..++ ..
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~--~~------------ 129 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEV--EL------------ 129 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTC--CC------------
T ss_pred CCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHc--cC------------
Confidence 4578999999999999999988 566999999995 99999988621 1256799999998765 11
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEE
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 688 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~N 688 (771)
...+||+|+.+.-... + ...-.-..++..+.+.|+|||+++.+
T Consensus 130 -------------------~~~~fD~Iis~~~~~~----l---~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 130 -------------------PVEKVDIIISEWMGYC----L---FYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp -------------------SSSCEEEEEECCCBBT----B---TBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred -------------------CCCceEEEEEcccccc----c---cCchhHHHHHHHHHHhCCCCCEEccc
Confidence 1367999998531110 0 11112367899999999999999743
No 433
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.35 E-value=6.8e-07 Score=92.00 Aligned_cols=139 Identities=17% Similarity=0.124 Sum_probs=98.7
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
...+||+||+|.|.++..|....|..+|++||+||..++.|++.. |+ .++++++.+|+++.+..
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl--~~~I~v~~gD~l~~~~~----------- 87 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGL--TEQIDVRKGNGLAVIEK----------- 87 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC--TTTEEEEECSGGGGCCG-----------
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CceEEEEecchhhccCc-----------
Confidence 447899999999999999999988779999999999999999986 55 56899999999875422
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHH
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 697 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~ 697 (771)
+.+||+|++- || ..-+-.++|......|+++|.||+.-... .
T Consensus 88 ----------------------~~~~D~Ivia--------gm----Gg~lI~~IL~~~~~~L~~~~~lIlq~~~~----~ 129 (244)
T 3gnl_A 88 ----------------------KDAIDTIVIA--------GM----GGTLIRTILEEGAAKLAGVTKLILQPNIA----A 129 (244)
T ss_dssp ----------------------GGCCCEEEEE--------EE----CHHHHHHHHHHTGGGGTTCCEEEEEESSC----H
T ss_pred ----------------------cccccEEEEe--------CC----chHHHHHHHHHHHHHhCCCCEEEEEcCCC----h
Confidence 1359999871 22 11134778999999999999999876432 2
Q ss_pred HHHHHHHHHh-ccceEEeeec--CCccEEEEEecCC
Q 004164 698 DMVISRMKMV-FNHLFCLQLE--EDVNLVLFGLSSE 730 (771)
Q Consensus 698 ~~v~~~l~~v-F~~v~~~~~~--~~~N~Vl~a~~~~ 730 (771)
..+...|.+. |.-+-..-+. .-.=+|+.+.+..
T Consensus 130 ~~lr~~L~~~Gf~i~~E~lv~e~~k~Yeii~~~~~~ 165 (244)
T 3gnl_A 130 WQLREWSEQNNWLITSEAILREDNKVYEIMVLAPSE 165 (244)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEETTEEEEEEEEEECS
T ss_pred HHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeCC
Confidence 3345555555 5432222122 2234566666553
No 434
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.35 E-value=1.2e-06 Score=92.17 Aligned_cols=114 Identities=13% Similarity=0.148 Sum_probs=81.0
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CC-CCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GF-TQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~-~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
.+.+||+||+|+|.++..|.... .+|++||+++.+++.|++.. +. ....++.++.+|..+.-.+..
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-------- 126 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEG--FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVP-------- 126 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSC--------
T ss_pred CCCEEEEecCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccc--------
Confidence 45789999999999999888874 49999999999999998764 11 122568899999887643321
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCc---CcccHHHHHHHHHccCCCcEEEEEecc
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAA---DFVEGSFLLTVKDALSEQGLFIVNLVS 691 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~---~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 691 (771)
...+||+|++--+.- ..+ +.. .=.-..+|+.+.+.|+|||.|++....
T Consensus 127 ----------------------~~~~fD~V~~~g~~l---~~~--~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 127 ----------------------AGDGFDAVICLGNSF---AHL--PDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp ----------------------CTTCEEEEEECTTCG---GGS--CCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ----------------------cCCCeEEEEEcChHH---hhc--CccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 136799999821000 000 000 001367999999999999999987643
No 435
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.35 E-value=1.1e-06 Score=96.74 Aligned_cols=142 Identities=19% Similarity=0.159 Sum_probs=97.0
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||+||+|.|.++..+... ..+|++||+|+.+++.|++.+... .-.++++.+|+.++...
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~-~~~v~~~~~D~~~~~~~-------------- 295 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEAN-ALKAQALHSDVDEALTE-------------- 295 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHT-TCCCEEEECSTTTTSCT--------------
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHc-CCCeEEEEcchhhcccc--------------
Confidence 4568999999999999988887 359999999999999999987321 12389999998765221
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHHHHH
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMV 700 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~v 700 (771)
..+||+|+++. .-.. +.. ...-....+++.+++.|+|||.+++-.. +... .
T Consensus 296 -------------------~~~fD~Ii~np--p~~~-~~~--~~~~~~~~~l~~~~~~LkpGG~l~iv~n-~~l~----~ 346 (381)
T 3dmg_A 296 -------------------EARFDIIVTNP--PFHV-GGA--VILDVAQAFVNVAAARLRPGGVFFLVSN-PFLK----Y 346 (381)
T ss_dssp -------------------TCCEEEEEECC--CCCT-TCS--SCCHHHHHHHHHHHHHEEEEEEEEEEEC-TTSC----H
T ss_pred -------------------CCCeEEEEECC--chhh-ccc--ccHHHHHHHHHHHHHhcCcCcEEEEEEc-CCCC----h
Confidence 25799999952 1110 000 0011236899999999999999998653 2222 2
Q ss_pred HHHHHHhccceEEeeecCCccEEEEEecCC
Q 004164 701 ISRMKMVFNHLFCLQLEEDVNLVLFGLSSE 730 (771)
Q Consensus 701 ~~~l~~vF~~v~~~~~~~~~N~Vl~a~~~~ 730 (771)
-..+.+.|..+-.+ .+..=.|+-+.+.+
T Consensus 347 ~~~l~~~f~~v~~l--~~~gF~Vl~a~~~~ 374 (381)
T 3dmg_A 347 EPLLEEKFGAFQTL--KVAEYKVLFAEKRG 374 (381)
T ss_dssp HHHHHHHHSCCEEE--EESSSEEEEEECC-
T ss_pred HHHHHHhhccEEEE--eCCCEEEEEEEEec
Confidence 35567788887766 33344566555544
No 436
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.34 E-value=9.6e-07 Score=93.26 Aligned_cols=105 Identities=15% Similarity=0.219 Sum_probs=80.3
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
....+||+||+|.|.++..|...++ .++++||+++.+++.|++.+ |+ .++++++.+|..+. .
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~----~-------- 145 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFG-VSIDCLNIAPVQNKRNEEYNNQAGL--ADNITVKYGSFLEI----P-------- 145 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHHTC--TTTEEEEECCTTSC----S--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEEcCcccC----C--------
Confidence 4557999999999999998888764 59999999999999999886 44 46799999998652 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEec
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 690 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 690 (771)
..+..||+|+.-- ....+ +. -..+|+.+++.|+|||.|++...
T Consensus 146 ---------------------~~~~~fD~v~~~~----~l~~~----~~--~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 146 ---------------------CEDNSYDFIWSQD----AFLHS----PD--KLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp ---------------------SCTTCEEEEEEES----CGGGC----SC--HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---------------------CCCCCEeEEEecc----hhhhc----CC--HHHHHHHHHHHcCCCeEEEEEEe
Confidence 1136799999721 10001 11 37899999999999999998654
No 437
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.33 E-value=5.8e-07 Score=91.31 Aligned_cols=102 Identities=18% Similarity=0.232 Sum_probs=77.2
Q ss_pred CCCcEEEEeccccHHHHHHHHhCC------CCcEEEEEcCHHHHHHHHhhcCCCC-----CCCeeEEEcchHHHHHhhcc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMP------FVGIEAVELDLTMLNLAEDYFGFTQ-----DKSLKVHITDGIKFVREMKS 609 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p------~~~i~~VEiD~~v~~vA~~~Fg~~~-----~~r~~v~i~Dg~~~l~~~~~ 609 (771)
...+||+||+|+|.++..+....+ ..+|++||+++.+++.|++.+.-.. .++++++.+|+.+.+..
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--- 160 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP--- 160 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG---
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc---
Confidence 346899999999999988888654 2589999999999999998863111 25799999998752111
Q ss_pred CCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEe
Q 004164 610 SSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 689 (771)
...||+|+++.... . +++.+.+.|+|||.+++.+
T Consensus 161 ------------------------------~~~fD~I~~~~~~~-----------~-----~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 161 ------------------------------NAPYNAIHVGAAAP-----------D-----TPTELINQLASGGRLIVPV 194 (227)
T ss_dssp ------------------------------GCSEEEEEECSCBS-----------S-----CCHHHHHTEEEEEEEEEEE
T ss_pred ------------------------------CCCccEEEECCchH-----------H-----HHHHHHHHhcCCCEEEEEE
Confidence 14699999854221 1 2278899999999999998
Q ss_pred cc
Q 004164 690 VS 691 (771)
Q Consensus 690 ~~ 691 (771)
..
T Consensus 195 ~~ 196 (227)
T 1r18_A 195 GP 196 (227)
T ss_dssp SC
T ss_pred ec
Confidence 64
No 438
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.33 E-value=6.9e-07 Score=98.51 Aligned_cols=114 Identities=13% Similarity=0.131 Sum_probs=83.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhc--------CCCCCCCeeEEEcchHHHHHhhccC
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYF--------GFTQDKSLKVHITDGIKFVREMKSS 610 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiD~~v~~vA~~~F--------g~~~~~r~~v~i~Dg~~~l~~~~~~ 610 (771)
....+||+||+|+|.++..|...+ |..+|++||+++.+++.|++.+ |....++++++.+|..+......
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~-- 159 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEP-- 159 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBS--
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhccc--
Confidence 355789999999999998888876 6789999999999999999986 41234689999999876421100
Q ss_pred CcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEec
Q 004164 611 SATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 690 (771)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~ 690 (771)
.......||+|+...--. .+ +. -..+|+.+++.|+|||.|++..+
T Consensus 160 -------------------------~~~~~~~fD~V~~~~~l~----~~----~d--~~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 160 -------------------------EGVPDSSVDIVISNCVCN----LS----TN--KLALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp -------------------------CCCCTTCEEEEEEESCGG----GC----SC--HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------------------------CCCCCCCEEEEEEccchh----cC----CC--HHHHHHHHHHHcCCCCEEEEEEe
Confidence 011236799999842111 01 11 26899999999999999998643
No 439
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.33 E-value=9.2e-07 Score=96.23 Aligned_cols=103 Identities=21% Similarity=0.196 Sum_probs=76.1
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
...+||+||+|+|.++.++... +..+|++||+++ +++.|++.+ |+ .++++++.+|..++ ..
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~l--~~~v~~~~~d~~~~--~~---------- 113 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNL--TDRIVVIPGKVEEV--SL---------- 113 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTC--TTTEEEEESCTTTC--CC----------
T ss_pred CcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcCC--CCcEEEEEcchhhC--CC----------
Confidence 4578999999999999999886 556999999997 789998876 43 46899999997653 11
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEe
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 689 (771)
..+||+|+...... .+ ..+. -.+++..+++.|+|||+++++.
T Consensus 114 ----------------------~~~~D~Ivs~~~~~----~~--~~~~--~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 114 ----------------------PEQVDIIISEPMGY----ML--FNER--MLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp ----------------------SSCEEEEEECCCBT----TB--TTTS--HHHHHHHGGGGEEEEEEEESCE
T ss_pred ----------------------CCceeEEEEeCchh----cC--ChHH--HHHHHHHHHhhcCCCeEEEEec
Confidence 24699999842110 00 0111 2567788899999999998653
No 440
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.32 E-value=9.9e-07 Score=94.63 Aligned_cols=103 Identities=19% Similarity=0.168 Sum_probs=77.8
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
....+||+||+|+|.++..+....+ ..+|++||+++.+++.|++.+.-..-++++++.+|+.+.+..
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~------------ 141 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE------------ 141 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG------------
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc------------
Confidence 3457899999999999999988876 367999999999999999987211113499999999764221
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEecc
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 691 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 691 (771)
...||+|+++.--. ++. +.+.+.|+|||++++.+.+
T Consensus 142 ---------------------~~~fD~Iv~~~~~~-----------~~~-----~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 142 ---------------------FSPYDVIFVTVGVD-----------EVP-----ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp ---------------------GCCEEEEEECSBBS-----------CCC-----HHHHHHEEEEEEEEEEBCB
T ss_pred ---------------------CCCeEEEEEcCCHH-----------HHH-----HHHHHhcCCCcEEEEEECC
Confidence 24699999953211 111 5788899999999998644
No 441
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.31 E-value=3.6e-07 Score=92.81 Aligned_cols=91 Identities=15% Similarity=0.155 Sum_probs=73.2
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||+||+|+|.++..+... ..+|++||+++.+++.|++.. ++++++.+|+.+.+.
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~--------------- 105 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANA-----PHADVYEWNGKGELP--------------- 105 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHC-----TTSEEEECCSCSSCC---------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhC-----CCceEEEcchhhccC---------------
Confidence 4578999999999999999888 369999999999999999982 468999999853211
Q ss_pred ccccccCCCCCCCCCCCCC-CCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEE
Q 004164 621 GNEITSNNTRSCNGNCTAS-NARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFI 686 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~-~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv 686 (771)
.. ..+||+|+.. .+ -..+|+.+.+.|+|||.|+
T Consensus 106 -----------------~~~~~~fD~v~~~---~~-------------~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 106 -----------------AGLGAPFGLIVSR---RG-------------PTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp -----------------TTCCCCEEEEEEE---SC-------------CSGGGGGHHHHEEEEEEEE
T ss_pred -----------------CcCCCCEEEEEeC---CC-------------HHHHHHHHHHHcCCCcEEE
Confidence 11 3579999985 11 1466789999999999999
No 442
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.31 E-value=1e-06 Score=92.59 Aligned_cols=104 Identities=11% Similarity=0.079 Sum_probs=77.9
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||+||+|.|.++..|... ..+|++||+++.+++.|++.+.-. .-+++++.+|..++..
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~d~~~~~~--------------- 181 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKE-NLNISTALYDINAANI--------------- 181 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCGGGCCC---------------
T ss_pred CCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHc-CCceEEEEeccccccc---------------
Confidence 4678999999999999998887 359999999999999999987321 1279999999865311
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEe
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 689 (771)
..+||+|+... . ..-+ +++ .-..+++.+++.|+|||.+++..
T Consensus 182 -------------------~~~fD~i~~~~--~--~~~~--~~~--~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 182 -------------------QENYDFIVSTV--V--FMFL--NRE--RVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp -------------------CSCEEEEEECS--S--GGGS--CGG--GHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -------------------cCCccEEEEcc--c--hhhC--CHH--HHHHHHHHHHHhcCCCcEEEEEE
Confidence 26799999832 1 0000 111 12589999999999999977644
No 443
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.31 E-value=2e-06 Score=92.80 Aligned_cols=102 Identities=20% Similarity=0.289 Sum_probs=76.2
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
...+||+||+|+|.+++++... +..+|++||+++ +++.|++.+ ++ .++++++.+|+.++ .
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~--~~~i~~~~~d~~~~----~--------- 100 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMSS-IIEMAKELVELNGF--SDKITLLRGKLEDV----H--------- 100 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESST-HHHHHHHHHHHTTC--TTTEEEEESCTTTS----C---------
T ss_pred CCCEEEEecCccHHHHHHHHHC-CCCEEEEEChHH-HHHHHHHHHHHcCC--CCCEEEEECchhhc----c---------
Confidence 4568999999999999999887 455999999995 899999886 43 46899999998654 1
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEE
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFI 686 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv 686 (771)
....+||+|+.+.-.. .+ ...-.-..++..+.+.|+|||+++
T Consensus 101 --------------------~~~~~~D~Ivs~~~~~----~l---~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 101 --------------------LPFPKVDIIISEWMGY----FL---LYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp --------------------CSSSCEEEEEECCCBT----TB---STTCCHHHHHHHHHHHEEEEEEEE
T ss_pred --------------------CCCCcccEEEEeCchh----hc---ccHHHHHHHHHHHHhhcCCCeEEE
Confidence 0125799999853111 00 111122578999999999999998
No 444
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.31 E-value=1.1e-06 Score=92.63 Aligned_cols=75 Identities=13% Similarity=0.171 Sum_probs=62.2
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCe----EEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecC
Q 004164 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHG----ITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMT 126 (771)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~----V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~ 126 (771)
+.+...+.+.+.. .++.+|||||||+|.++..|++.+. . |+++|+++.+++.++++. ..+++++++|+.
T Consensus 28 ~~i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~~La~~~~-~~~~~V~avDid~~~l~~a~~~~---~~~v~~i~~D~~ 100 (279)
T 3uzu_A 28 HGVIDAIVAAIRP---ERGERMVEIGPGLGALTGPVIARLA-TPGSPLHAVELDRDLIGRLEQRF---GELLELHAGDAL 100 (279)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEECCTTSTTHHHHHHHHC-BTTBCEEEEECCHHHHHHHHHHH---GGGEEEEESCGG
T ss_pred HHHHHHHHHhcCC---CCcCEEEEEccccHHHHHHHHHhCC-CcCCeEEEEECCHHHHHHHHHhc---CCCcEEEECChh
Confidence 3555667777654 5788999999999999999998865 4 999999999999887763 467999999999
Q ss_pred CCCCCC
Q 004164 127 SMQFMD 132 (771)
Q Consensus 127 ~l~~~~ 132 (771)
++++++
T Consensus 101 ~~~~~~ 106 (279)
T 3uzu_A 101 TFDFGS 106 (279)
T ss_dssp GCCGGG
T ss_pred cCChhH
Confidence 987653
No 445
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.31 E-value=5.2e-06 Score=89.17 Aligned_cols=102 Identities=19% Similarity=0.250 Sum_probs=79.0
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
....+||+||+|.|.++..+...+|..+++++|++ .+++.|++.+ ++ .++++++.+|..+. ..
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~--~~--------- 229 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGV--ASRYHTIAGSAFEV--DY--------- 229 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTC--GGGEEEEESCTTTS--CC---------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCC--CcceEEEecccccC--CC---------
Confidence 35579999999999999999999999999999999 9999999986 43 45799999987652 11
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcc---cHHHHHHHHHccCCCcEEEEEe
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV---EGSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~---~~~fl~~~~~~L~~~Gilv~Nl 689 (771)
...||+|++- .. ...+- -..+|+.+++.|+|||.+++.-
T Consensus 230 -----------------------~~~~D~v~~~--~~---------l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 230 -----------------------GNDYDLVLLP--NF---------LHHFDVATCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp -----------------------CSCEEEEEEE--SC---------GGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----------------------CCCCcEEEEc--ch---------hccCCHHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 1349999981 11 11121 2589999999999999777643
No 446
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.30 E-value=2.8e-07 Score=95.22 Aligned_cols=46 Identities=22% Similarity=0.156 Sum_probs=40.6
Q ss_pred CCCcEEEEeccccHHHHHHHHh--CCCCcEEEEEcCHHHHHHHHhhcC
Q 004164 541 KSVKAVVIGLGAGLLPMFLHEC--MPFVGIEAVELDLTMLNLAEDYFG 586 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~--~p~~~i~~VEiD~~v~~vA~~~Fg 586 (771)
.+.+||++|+|+|.++..+... .+..+|++||+|+.++++|++...
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~ 98 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLA 98 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHH
Confidence 4578999999999999998887 566799999999999999997753
No 447
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.30 E-value=1.6e-06 Score=95.31 Aligned_cols=105 Identities=16% Similarity=0.129 Sum_probs=78.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-CCCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~-~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
....+||+||+|+|.++.++.... ..+|++||++ .+++.|++.+.- ...++++++.+|..++ .
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~---------- 125 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDI----S---------- 125 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGC----C----------
T ss_pred CCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhc----C----------
Confidence 456789999999999999999883 3499999999 999999988721 1246799999998664 1
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEE
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIV 687 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~ 687 (771)
. ..+||+|+.+....- ....-.-..+++.+.+.|+|||+|++
T Consensus 126 -------------------~-~~~~D~Iv~~~~~~~-------l~~e~~~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 126 -------------------L-PEKVDVIISEWMGYF-------LLRESMFDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp -------------------C-SSCEEEEEECCCBTT-------BTTTCTHHHHHHHHHHHEEEEEEEES
T ss_pred -------------------c-CCcceEEEEcChhhc-------ccchHHHHHHHHHHHhhCCCCeEEEE
Confidence 0 157999999541110 01111236789999999999999984
No 448
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.30 E-value=1.3e-06 Score=96.15 Aligned_cols=103 Identities=14% Similarity=0.167 Sum_probs=83.5
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCC-CcEEEEEcCHHHHHHHHhhcCCCC-CCC-eeEEEcchHHHHH-hhccCCccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPF-VGIEAVELDLTMLNLAEDYFGFTQ-DKS-LKVHITDGIKFVR-EMKSSSATDEM 616 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~-~~i~~VEiD~~v~~vA~~~Fg~~~-~~r-~~v~i~Dg~~~l~-~~~~~~~~~~~ 616 (771)
...+||+++.|+|.++..+....++ .+|++||+||..++.+++...+.. +++ ++++.+|+.++++ ...
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~-------- 123 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWG-------- 123 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCS--------
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhC--------
Confidence 3468999999999999988887654 589999999999999999873321 345 9999999999987 642
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEe
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl 689 (771)
.+||+|++|.+.. ..+|++.+.+.|+++|++++..
T Consensus 124 ------------------------~~fD~V~lDP~g~--------------~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 124 ------------------------FGFDYVDLDPFGT--------------PVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ------------------------SCEEEEEECCSSC--------------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------------CCCcEEEECCCcC--------------HHHHHHHHHHHhCCCCEEEEEe
Confidence 5699999986311 1579999999999999988754
No 449
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.30 E-value=9.9e-07 Score=87.46 Aligned_cols=103 Identities=16% Similarity=0.171 Sum_probs=77.4
Q ss_pred cEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccccccc
Q 004164 544 KAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHGNE 623 (771)
Q Consensus 544 ~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~~~ 623 (771)
+||+||+|.|.++..+... ..++++||+++.+++.|++.+.- ...+++++.+|..++ .
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~d~~~~----~--------------- 89 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQE-KGVKITTVQSNLADF----D--------------- 89 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHH-HTCCEEEECCBTTTB----S---------------
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHh-cCCceEEEEcChhhc----C---------------
Confidence 9999999999999888876 35999999999999999998731 112688888887653 1
Q ss_pred cccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 624 ITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
.....||+|+... .- + ++. .-..+|+.+++.|+|||.+++.....
T Consensus 90 --------------~~~~~fD~v~~~~-~~-----~--~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 90 --------------IVADAWEGIVSIF-CH-----L--PSS--LRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp --------------CCTTTCSEEEEEC-CC-----C--CHH--HHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred --------------CCcCCccEEEEEh-hc-----C--CHH--HHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 1135799999732 10 0 111 13679999999999999999987544
No 450
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.29 E-value=1.2e-06 Score=89.50 Aligned_cols=103 Identities=17% Similarity=0.274 Sum_probs=76.3
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
....+||+||+|.|.++..+....+ .+|++||+++.+++.|++.+.-..-++++++.+|+.. ...
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~~----------- 154 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK---GFP----------- 154 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG---CCG-----------
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCccc---CCC-----------
Confidence 3456899999999999999998877 7999999999999999998621111349999999821 111
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
....||+|+++..- ..+ ...+.+.|+|||.+++.+...
T Consensus 155 -------------------~~~~fD~Ii~~~~~-----------~~~-----~~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 155 -------------------PKAPYDVIIVTAGA-----------PKI-----PEPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp -------------------GGCCEEEEEECSBB-----------SSC-----CHHHHHTEEEEEEEEEEECSS
T ss_pred -------------------CCCCccEEEECCcH-----------HHH-----HHHHHHhcCCCcEEEEEEecC
Confidence 01359999985311 112 136788999999999988544
No 451
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.29 E-value=8.1e-07 Score=89.41 Aligned_cols=109 Identities=13% Similarity=0.043 Sum_probs=75.2
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHH----HHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNL----AEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDE 615 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~v----A~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~ 615 (771)
....+||+||+|+|.++..|...+|..+|++||+++.+++. |++...-..-++++++++|+.+. .
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l----~------- 94 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERL----P------- 94 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTC----C-------
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhC----C-------
Confidence 34578999999999999999999998999999999998774 33332111224799999998763 1
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCC-cCc-ccHHHHHHHHHccCCCcEEEEEe
Q 004164 616 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPA-ADF-VEGSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp-~~f-~~~~fl~~~~~~L~~~Gilv~Nl 689 (771)
..... |.|++.+.... . . ..+ -...+|+.+++.|+|||.|++.+
T Consensus 95 ----------------------~~~~~-d~v~~~~~~~~----~---~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 95 ----------------------PLSGV-GELHVLMPWGS----L---LRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp ----------------------SCCCE-EEEEEESCCHH----H---HHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred ----------------------CCCCC-CEEEEEccchh----h---hhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 01133 76664331100 0 0 000 01688999999999999999854
No 452
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.29 E-value=3e-06 Score=83.43 Aligned_cols=128 Identities=14% Similarity=0.146 Sum_probs=86.5
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCC---------CcEEEEEcCHHHHHHHHhhcCCCCCCCeeEE-EcchHHHHH--hhc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPF---------VGIEAVELDLTMLNLAEDYFGFTQDKSLKVH-ITDGIKFVR--EMK 608 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~---------~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~-i~Dg~~~l~--~~~ 608 (771)
...+||+||+|+|.++..|...++. .+|++||+++.. . -++++++ .+|....-. ...
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------~---~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------P---LEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------C---CTTCEEECSCCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------c---CCCCeEEEeccCCCHHHHHHHH
Confidence 4578999999999999999998764 699999999941 1 2467888 888653311 100
Q ss_pred cCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCccc--------HHHHHHHHHccC
Q 004164 609 SSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE--------GSFLLTVKDALS 680 (771)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~--------~~fl~~~~~~L~ 680 (771)
. ...+.+||+|+.|.... . .+ ....+ ..+++.+.+.|+
T Consensus 91 ~---------------------------~~~~~~fD~V~~~~~~~-~-~~-----~~~~~~~~~~~~~~~~l~~~~~~Lk 136 (196)
T 2nyu_A 91 E---------------------------VLPGRRADVILSDMAPN-A-TG-----FRDLDHDRLISLCLTLLSVTPDILQ 136 (196)
T ss_dssp H---------------------------HSGGGCEEEEEECCCCC-C-CS-----CHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred H---------------------------hcCCCCCcEEEeCCCCC-C-CC-----CcccCHHHHHHHHHHHHHHHHHHhc
Confidence 0 00124799999965211 0 01 01111 378999999999
Q ss_pred CCcEEEEEeccCChhHHHHHHHHHHHhccceEEee
Q 004164 681 EQGLFIVNLVSRSQATKDMVISRMKMVFNHLFCLQ 715 (771)
Q Consensus 681 ~~Gilv~Nl~~~~~~~~~~v~~~l~~vF~~v~~~~ 715 (771)
|||.|++..+.... ...+...++..|..+..++
T Consensus 137 pgG~lv~~~~~~~~--~~~~~~~l~~~f~~v~~~~ 169 (196)
T 2nyu_A 137 PGGTFLCKTWAGSQ--SRRLQRRLTEEFQNVRIIK 169 (196)
T ss_dssp EEEEEEEEECCSGG--GHHHHHHHHHHEEEEEEEC
T ss_pred CCCEEEEEecCCcc--HHHHHHHHHHHhcceEEEC
Confidence 99999998764432 3456778888898776664
No 453
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.29 E-value=6.4e-07 Score=92.97 Aligned_cols=158 Identities=11% Similarity=0.067 Sum_probs=93.3
Q ss_pred HHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCCCCCCCc
Q 004164 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQFMDETF 135 (771)
Q Consensus 57 l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~~~~~sF 135 (771)
|.++.++....++.+|||||||+|.++..+++. +...|+++|++..+...... ....+.++.+...++....++.+.+
T Consensus 79 L~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~-~~~~g~~ii~~~~~~dv~~l~~~~~ 157 (282)
T 3gcz_A 79 LRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIM-RTTLGWNLIRFKDKTDVFNMEVIPG 157 (282)
T ss_dssp HHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCCGGGSCCCCC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccc-cccCCCceEEeeCCcchhhcCCCCc
Confidence 444443333467889999999999999988854 66689999998642111100 0011234444554443344567899
Q ss_pred cEEEeccccccccCcccchHHHHHHHHHHHHccccC--eEEEEEEcC--cchhhcchhhhhccCcEEEEeecCCCCCCCC
Q 004164 136 DVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSG--GKFVCLTLA--ESHVLGLLFPKFRFGWKMSVHAIPQKSSSEP 211 (771)
Q Consensus 136 DlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpG--G~~ii~~~~--~~~~~~~l~~~~~~~w~~~~~~i~~~~~~~~ 211 (771)
|+|++..+.+ -.....+......+|.-+.++|+|| |.|++-.+. .+... .+...++..|..-...-| ++...
T Consensus 158 DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~-~l~~~lk~~F~~V~~~KP--aSR~~ 233 (282)
T 3gcz_A 158 DTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIM-EELSRLQLKHGGGLVRVP--LSRNS 233 (282)
T ss_dssp SEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHH-HHHHHHHHHHCCEEECCT--TSCTT
T ss_pred CEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHH-HHHHHHHHhcCCEEEEcC--CCccc
Confidence 9999987776 3332211112224588888999999 999998887 44432 334444333333333333 33445
Q ss_pred CCccEEEE
Q 004164 212 SLQTFMVV 219 (771)
Q Consensus 212 ~l~~f~~v 219 (771)
+.+.|++.
T Consensus 234 S~E~Y~V~ 241 (282)
T 3gcz_A 234 THEMYWVS 241 (282)
T ss_dssp CCCEEEET
T ss_pred CcceeEEE
Confidence 56656553
No 454
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.28 E-value=2.2e-06 Score=90.61 Aligned_cols=115 Identities=18% Similarity=0.170 Sum_probs=75.5
Q ss_pred CCCcEEEEeccccHHHH----HHHHhCCCCcE--EEEEcCHHHHHHHHhhcCCC---CCCCeeEEEcchHHHHHhhccCC
Q 004164 541 KSVKAVVIGLGAGLLPM----FLHECMPFVGI--EAVELDLTMLNLAEDYFGFT---QDKSLKVHITDGIKFVREMKSSS 611 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~----~L~~~~p~~~i--~~VEiD~~v~~vA~~~Fg~~---~~~r~~v~i~Dg~~~l~~~~~~~ 611 (771)
.+.+||+||+|+|.++. .+...+|...| ++||+++.|++.|++.+.-. ..-++.+..+|+.++......
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-- 129 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE-- 129 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT--
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc--
Confidence 45689999999996543 33444577655 99999999999999986311 112344556677665432110
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcc-cHHHHHHHHHccCCCcEEEEEec
Q 004164 612 ATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV-EGSFLLTVKDALSEQGLFIVNLV 690 (771)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~-~~~fl~~~~~~L~~~Gilv~Nl~ 690 (771)
+..+.+||+|++- .. -..+- -..+|+.++++|+|||.|++-..
T Consensus 130 -------------------------~~~~~~fD~V~~~--~~---------l~~~~d~~~~l~~~~r~LkpgG~l~i~~~ 173 (292)
T 2aot_A 130 -------------------------KKELQKWDFIHMI--QM---------LYYVKDIPATLKFFHSLLGTNAKMLIIVV 173 (292)
T ss_dssp -------------------------TTCCCCEEEEEEE--SC---------GGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred -------------------------ccCCCceeEEEEe--ee---------eeecCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 0113679999972 11 11111 26699999999999999998765
Q ss_pred cCC
Q 004164 691 SRS 693 (771)
Q Consensus 691 ~~~ 693 (771)
+.+
T Consensus 174 ~~~ 176 (292)
T 2aot_A 174 SGS 176 (292)
T ss_dssp CTT
T ss_pred cCC
Confidence 543
No 455
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.28 E-value=1.1e-06 Score=90.46 Aligned_cols=107 Identities=15% Similarity=0.175 Sum_probs=78.7
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
.+.+||+||+|+|.++..|... ..+|++||+++.+++.|++.+.- ...+++++.+|..++ .
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~-~~~~v~~~~~d~~~~----~------------ 101 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKE-RNLKIEFLQGDVLEI----A------------ 101 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH-TTCCCEEEESCGGGC----C------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHh-cCCceEEEECChhhc----c------------
Confidence 4578999999999999888876 35899999999999999988732 123689999998763 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEecc
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 691 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 691 (771)
...+||+|++....... + ++. --..+|+.+++.|+|||+|++.+.+
T Consensus 102 ------------------~~~~fD~v~~~~~~~~~---~--~~~--~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 102 ------------------FKNEFDAVTMFFSTIMY---F--DEE--DLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp ------------------CCSCEEEEEECSSGGGG---S--CHH--HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ------------------cCCCccEEEEcCCchhc---C--CHH--HHHHHHHHHHHHcCCCeEEEEeccc
Confidence 02569999973211100 0 011 1267899999999999999987754
No 456
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.28 E-value=3e-06 Score=85.95 Aligned_cols=100 Identities=20% Similarity=0.323 Sum_probs=76.9
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
....+||+||+|+|.++..+.... .+|++||+++.+++.|++.+.-.. +++++.+|+.+.+. .
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~d~~~~~~--~----------- 131 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYN--NIKLILGDGTLGYE--E----------- 131 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCS--SEEEEESCGGGCCG--G-----------
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcC--CeEEEECCcccccc--c-----------
Confidence 345689999999999999998886 699999999999999999985322 79999999876211 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
...||+|+++..- .++. ..+.+.|+|||.+++.....
T Consensus 132 --------------------~~~fD~v~~~~~~-----------~~~~-----~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 132 --------------------EKPYDRVVVWATA-----------PTLL-----CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp --------------------GCCEEEEEESSBB-----------SSCC-----HHHHHTEEEEEEEEEEECSS
T ss_pred --------------------CCCccEEEECCcH-----------HHHH-----HHHHHHcCCCcEEEEEEcCC
Confidence 2569999985311 1121 46888999999999887544
No 457
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.28 E-value=7.8e-06 Score=89.04 Aligned_cols=100 Identities=14% Similarity=0.135 Sum_probs=78.4
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
....+||+||+|.|.++..+...+|..+++++|+ |.+++.|++.+ ++ .++++++.+|..+. ..
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~--~~--------- 254 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGV--ADRMRGIAVDIYKE--SY--------- 254 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC--TTTEEEEECCTTTS--CC---------
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCC--CCCEEEEeCccccC--CC---------
Confidence 4567999999999999999999999999999999 99999999886 33 46799999998653 11
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcc---cHHHHHHHHHccCCCcEEEEE
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV---EGSFLLTVKDALSEQGLFIVN 688 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~---~~~fl~~~~~~L~~~Gilv~N 688 (771)
..+|+|++.- . -..+- -..+|+.+++.|+|||.+++.
T Consensus 255 ------------------------~~~D~v~~~~--v---------lh~~~d~~~~~~l~~~~~~L~pgG~l~i~ 294 (359)
T 1x19_A 255 ------------------------PEADAVLFCR--I---------LYSANEQLSTIMCKKAFDAMRSGGRLLIL 294 (359)
T ss_dssp ------------------------CCCSEEEEES--C---------GGGSCHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred ------------------------CCCCEEEEec--h---------hccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 2249998821 1 11122 267899999999999999654
No 458
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.28 E-value=2.1e-06 Score=93.18 Aligned_cols=104 Identities=9% Similarity=0.038 Sum_probs=79.8
Q ss_pred CCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcC-CCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 542 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG-FTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 542 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg-~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
..+||+||+|.|.+...+...+|..+++++|+ |.+++.|++++. ....++++++.+|..+.-...
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------------- 245 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE------------- 245 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT-------------
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC-------------
Confidence 67999999999999999999999999999999 899999998862 112468999999976531001
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCccc---HHHHHHHHHccCCCcEEEEEe
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~---~~fl~~~~~~L~~~Gilv~Nl 689 (771)
...||+|++-- . -..+-+ ..+|+.+++.|+|||.|++.-
T Consensus 246 -------------------~~~~D~v~~~~--v---------lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 246 -------------------GGAADVVMLND--C---------LHYFDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp -------------------TCCEEEEEEES--C---------GGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -------------------CCCccEEEEec--c---------cccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 24599999811 1 111222 579999999999999988753
No 459
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.28 E-value=1.1e-06 Score=96.79 Aligned_cols=100 Identities=13% Similarity=0.004 Sum_probs=76.4
Q ss_pred CCCeEEEEcCCcchhHHHHHhc-CCCeEEEEcCCHHHHHHHHHHhhcC---------------C-CCcEEEEeecCCCCC
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD---------------R-SDMRWRVMDMTSMQF 130 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~-g~~~V~~vDiS~~~i~~~~~~~~~~---------------~-~~i~~~~~D~~~l~~ 130 (771)
++.+|||+|||+|..+..++.. +..+|+++|+++.+++.+++..... + .+++++++|+.++..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 4689999999999999999987 5558999999999999887655443 3 238899999877521
Q ss_pred -CCCCccEEEeccccccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 131 -MDETFDVILDKGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 131 -~~~sFDlVi~~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
..++||+|+..- . .. ...++..+.+.|++||+++++.
T Consensus 127 ~~~~~fD~I~lDP-~---~~-------~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDP-F---GS-------PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECC-S---SC-------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCC-C---CC-------HHHHHHHHHHhcCCCCEEEEEe
Confidence 135799999432 1 11 1378899999999999776654
No 460
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.27 E-value=1e-06 Score=93.87 Aligned_cols=88 Identities=15% Similarity=0.094 Sum_probs=69.7
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcC-CCeEEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCCC
Q 004164 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ 129 (771)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g-~~~V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l~ 129 (771)
+.+...+.+++.. .++.+|||+|||+|..+..+++.. ..+|+++|+|+.+++.++++....+.+++++++|+.+++
T Consensus 12 pvLl~e~l~~L~~---~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~ 88 (301)
T 1m6y_A 12 PVMVREVIEFLKP---EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREAD 88 (301)
T ss_dssp CTTHHHHHHHHCC---CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHH
T ss_pred HHHHHHHHHhcCC---CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHH
Confidence 3445556666654 578899999999999999999873 459999999999999998877555578999999998874
Q ss_pred --CC---CCCccEEEec
Q 004164 130 --FM---DETFDVILDK 141 (771)
Q Consensus 130 --~~---~~sFDlVi~~ 141 (771)
+. .++||.|+..
T Consensus 89 ~~l~~~g~~~~D~Vl~D 105 (301)
T 1m6y_A 89 FLLKTLGIEKVDGILMD 105 (301)
T ss_dssp HHHHHTTCSCEEEEEEE
T ss_pred HHHHhcCCCCCCEEEEc
Confidence 22 1579999854
No 461
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.27 E-value=1.9e-06 Score=94.21 Aligned_cols=102 Identities=19% Similarity=0.190 Sum_probs=79.7
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
....+||+||+|.|.++..+...+|..+++++|+ |.+++.|++.+ ++ .++++++.+|..+ ...
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~---~~~-------- 246 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGL--ADRVTVAEGDFFK---PLP-------- 246 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC--TTTEEEEECCTTS---CCS--------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCC--CCceEEEeCCCCC---cCC--------
Confidence 3567999999999999999999999999999999 99999999886 33 4589999999764 111
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCccc---HHHHHHHHHccCCCcEEEEEec
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNLV 690 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~---~~fl~~~~~~L~~~Gilv~Nl~ 690 (771)
..||+|++.- . -..+-+ ..+|+.+++.|+|||.+++.-.
T Consensus 247 ------------------------~~~D~v~~~~--v---------l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 247 ------------------------VTADVVLLSF--V---------LLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp ------------------------CCEEEEEEES--C---------GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ------------------------CCCCEEEEec--c---------ccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 2399999831 1 112222 3799999999999998887543
No 462
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.26 E-value=9.1e-07 Score=92.05 Aligned_cols=97 Identities=12% Similarity=0.193 Sum_probs=77.2
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||+||+|+|.++..+...+|..++++||+++.+++.|++.+ +++.++.+|+.+. .
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~----~------------ 143 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRL----P------------ 143 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSC----S------------
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhC----C------------
Confidence 457899999999999999999887789999999999999999886 3578888887542 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
..+..||+|+.- +. ..+++.+.+.|+|||.+++.....
T Consensus 144 -----------------~~~~~fD~v~~~-~~----------------~~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 144 -----------------FSDTSMDAIIRI-YA----------------PCKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp -----------------BCTTCEEEEEEE-SC----------------CCCHHHHHHHEEEEEEEEEEEECT
T ss_pred -----------------CCCCceeEEEEe-CC----------------hhhHHHHHHhcCCCcEEEEEEcCH
Confidence 113579999962 11 124899999999999999876544
No 463
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.26 E-value=2.1e-06 Score=92.40 Aligned_cols=100 Identities=19% Similarity=0.188 Sum_probs=78.0
Q ss_pred CcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-CCCCCeeEEEcchHHHHHhhccCCcccccccccc
Q 004164 543 VKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSVVHG 621 (771)
Q Consensus 543 ~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~-~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~~ 621 (771)
.+||+||+|+|.++..+...+|..+++++|+ |.+++.|++.+.- ...++++++.+|..+ ..
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~-------------- 230 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ---EV-------------- 230 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT---CC--------------
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC---CC--------------
Confidence 7999999999999999999999999999999 9999999998621 114689999998754 11
Q ss_pred cccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCccc---HHHHHHHHHccCCCcEEEEEe
Q 004164 622 NEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~---~~fl~~~~~~L~~~Gilv~Nl 689 (771)
...||+|++-- . -..+-+ ..+|+.+++.|+|||.+++.-
T Consensus 231 ------------------~~~~D~v~~~~--v---------l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 231 ------------------PSNGDIYLLSR--I---------IGDLDEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp ------------------CSSCSEEEEES--C---------GGGCCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ------------------CCCCCEEEEch--h---------ccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 14699999721 1 011111 489999999999999988763
No 464
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.26 E-value=9.1e-07 Score=90.13 Aligned_cols=107 Identities=18% Similarity=0.256 Sum_probs=78.3
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||+||+|+|.++..+... .++++||+++.+++.|++.+.- ...+++++.+|..++ .
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~d~~~~----~------------ 92 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAME-TNRHVDFWVQDMREL----E------------ 92 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHH-TTCCCEEEECCGGGC----C------------
T ss_pred CCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhh-cCCceEEEEcChhhc----C------------
Confidence 3478999999999998888776 5899999999999999998732 125689999997653 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEecc
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 691 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 691 (771)
. ..+||+|++..+.-.. + +..---..+|+.+.+.|+|||.+++.+..
T Consensus 93 -----------------~-~~~fD~v~~~~~~~~~---~---~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 93 -----------------L-PEPVDAITILCDSLNY---L---QTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp -----------------C-SSCEEEEEECTTGGGG---C---CSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -----------------C-CCCcCEEEEeCCchhh---c---CCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 0 2579999984211100 0 00001257899999999999999997743
No 465
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.25 E-value=1.7e-06 Score=86.04 Aligned_cols=110 Identities=15% Similarity=0.106 Sum_probs=77.2
Q ss_pred CCCCcEEEEeccccHH-HHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 540 GKSVKAVVIGLGAGLL-PMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l-~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
....+||+||+|+|.+ ..++.. +..++++||+++.+++.|++.+.- ...+++++.+|+.+. .
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~d~~~~----~---------- 84 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVE--DGYKTYGIEISDLQLKKAENFSRE-NNFKLNISKGDIRKL----P---------- 84 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHH--TTCEEEEEECCHHHHHHHHHHHHH-HTCCCCEEECCTTSC----C----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHh-cCCceEEEECchhhC----C----------
Confidence 3457899999999976 344433 346999999999999999988631 124688999988642 1
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCC
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 693 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 693 (771)
.....||+|+.. .....+ |+. --..+++.+++.|+|||.+++...+..
T Consensus 85 -------------------~~~~~fD~v~~~----~~l~~~--~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 85 -------------------FKDESMSFVYSY----GTIFHM--RKN--DVKEAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp -------------------SCTTCEEEEEEC----SCGGGS--CHH--HHHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred -------------------CCCCceeEEEEc----ChHHhC--CHH--HHHHHHHHHHHHcCCCcEEEEEEeccc
Confidence 113679999972 110111 111 136789999999999999999876543
No 466
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.25 E-value=7.6e-06 Score=94.18 Aligned_cols=176 Identities=9% Similarity=0.032 Sum_probs=110.7
Q ss_pred ccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc----C---------------CCeEEEEcCCHHHHHHH
Q 004164 47 YAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA----G---------------FHGITNVDFSKVVISDM 107 (771)
Q Consensus 47 ~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~----g---------------~~~V~~vDiS~~~i~~~ 107 (771)
|.....+...+.+++.. .++.+|||++||+|.+...+++. + ..+++|+|+++.++..+
T Consensus 151 fyTP~~iv~~mv~~l~p---~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 151 YFTPRPLIKTIIHLLKP---QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp CCCCHHHHHHHHHHHCC---CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred eeCCHHHHHHHHHHhcc---CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 33445677777888764 56789999999999998777653 1 13799999999999877
Q ss_pred HHHhhcCC-CC-----cEEEEeecCCCC-CCCCCccEEEeccccccccCcc-------cchHHHHHHHHHHHHccccCeE
Q 004164 108 LRRNVRDR-SD-----MRWRVMDMTSMQ-FMDETFDVILDKGGLDALMEPE-------LGHKLGNQYLSEVKRLLKSGGK 173 (771)
Q Consensus 108 ~~~~~~~~-~~-----i~~~~~D~~~l~-~~~~sFDlVi~~~~l~~l~~~~-------~~~~~~~~~l~~i~rvLkpGG~ 173 (771)
+..+...+ .. ..+.++|....+ ...++||+|+++-.+....... ........++..+.+.|+|||+
T Consensus 228 ~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr 307 (541)
T 2ar0_A 228 LMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGR 307 (541)
T ss_dssp HHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEE
T ss_pred HHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCE
Confidence 65543333 22 788999987653 4457899999986655432210 0001133789999999999999
Q ss_pred EEEEEcCc----chhhcchhhhh-ccCcEEEEeecCCCCCCCCCCccEEEEEEEcCC
Q 004164 174 FVCLTLAE----SHVLGLLFPKF-RFGWKMSVHAIPQKSSSEPSLQTFMVVADKENS 225 (771)
Q Consensus 174 ~ii~~~~~----~~~~~~l~~~~-~~~w~~~~~~i~~~~~~~~~l~~f~~v~~k~~~ 225 (771)
++++.... ......+...+ ..++...+..++...=.....+..+++++|.+.
T Consensus 308 ~a~V~p~~~L~~~~~~~~iR~~L~~~~~l~~ii~Lp~~~F~~t~v~t~Ilvl~k~~~ 364 (541)
T 2ar0_A 308 AAVVVPDNVLFEGGKGTDIRRDLMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKGTV 364 (541)
T ss_dssp EEEEEEHHHHHCCTHHHHHHHHHHHHEEEEEEEECCSSCSSSCSCCEEEEEEEEBCS
T ss_pred EEEEecCcceecCcHHHHHHHHHhhcCCEEEEEEcCcCcccCCCCcEEEEEEECCCC
Confidence 98886431 11011122222 223334455555321122345567777777654
No 467
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.25 E-value=1.5e-06 Score=94.04 Aligned_cols=112 Identities=13% Similarity=0.168 Sum_probs=86.1
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCC-CCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ-DKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~-~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
...+||++|+|+|.++.. .. +..+|++||++|.+++.|++.+.... +++++++.+|+.+++
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--------------- 256 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--------------- 256 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---------------
T ss_pred CCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---------------
Confidence 457899999999999888 55 45699999999999999999873221 357999999998764
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHHHH
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDM 699 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~ 699 (771)
.+||+|++|. |. ...++++.+.+.|+|||++++...+.. ...
T Consensus 257 ---------------------~~fD~Vi~dp------------P~--~~~~~l~~~~~~L~~gG~l~~~~~~~~---~~~ 298 (336)
T 2yx1_A 257 ---------------------VKGNRVIMNL------------PK--FAHKFIDKALDIVEEGGVIHYYTIGKD---FDK 298 (336)
T ss_dssp ---------------------CCEEEEEECC------------TT--TGGGGHHHHHHHEEEEEEEEEEEEESS---SHH
T ss_pred ---------------------CCCcEEEECC------------cH--hHHHHHHHHHHHcCCCCEEEEEEeecC---chH
Confidence 2599999953 11 113889999999999999998765555 334
Q ss_pred HHHHHHHhc
Q 004164 700 VISRMKMVF 708 (771)
Q Consensus 700 v~~~l~~vF 708 (771)
+.+.+++.+
T Consensus 299 ~~~~l~~~~ 307 (336)
T 2yx1_A 299 AIKLFEKKC 307 (336)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhc
Confidence 566676664
No 468
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.25 E-value=2.6e-06 Score=89.55 Aligned_cols=113 Identities=12% Similarity=0.042 Sum_probs=80.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~-~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
....+||+||+|+|.+...+... +..++++||+++.+++.|++.+.-. ...+++++.+|..+. ...
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~---------- 129 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGR--HMD---------- 129 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTS--CCC----------
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccc--ccC----------
Confidence 34579999999999887777776 4559999999999999999987321 235789999998653 100
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEecc
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 691 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 691 (771)
....||+|++...-. .+..+.. --..+|+.+++.|+|||.|++....
T Consensus 130 --------------------~~~~fD~v~~~~~l~----~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 130 --------------------LGKEFDVISSQFSFH----YAFSTSE--SLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp --------------------CSSCEEEEEEESCGG----GGGSSHH--HHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred --------------------CCCCcCEEEECchhh----hhcCCHH--HHHHHHHHHHHhcCCCCEEEEEECC
Confidence 136799999842100 0000011 1267999999999999999998744
No 469
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.24 E-value=1.3e-06 Score=95.45 Aligned_cols=107 Identities=11% Similarity=0.051 Sum_probs=78.7
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~-~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
...+||+||+|+|.++..+...+|..+++++|+ |.+++.|++.+.-. ..++++++.+|..+. +..
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~----------- 244 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDR--DVP----------- 244 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSS--SCC-----------
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEcccccc--CCC-----------
Confidence 457999999999999999999999999999999 99999999987421 246899999997542 000
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEE
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 688 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~N 688 (771)
. ...||+|++-- . ...+ +.+ --..+|+.+++.|+|||.+++.
T Consensus 245 ------------------~-p~~~D~v~~~~--v--lh~~--~~~--~~~~~l~~~~~~L~pgG~l~i~ 286 (363)
T 3dp7_A 245 ------------------F-PTGFDAVWMSQ--F--LDCF--SEE--EVISILTRVAQSIGKDSKVYIM 286 (363)
T ss_dssp ------------------C-CCCCSEEEEES--C--STTS--CHH--HHHHHHHHHHHHCCTTCEEEEE
T ss_pred ------------------C-CCCcCEEEEec--h--hhhC--CHH--HHHHHHHHHHHhcCCCcEEEEE
Confidence 0 14699998721 1 0000 011 1146899999999999988774
No 470
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.23 E-value=4.9e-06 Score=90.62 Aligned_cols=101 Identities=18% Similarity=0.224 Sum_probs=77.6
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+|++||+|.|.+...|.+.+|+.++++.|+ |.|++.|+++......+|++++.+|..+ . .
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~---~-~------------ 241 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFK---D-P------------ 241 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTT---S-C------------
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCcccc---C-C------------
Confidence 446899999999999999999999999999998 8999999999866557899999999643 1 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCccc---HHHHHHHHHccCCCcEEEEE
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVN 688 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~---~~fl~~~~~~L~~~Gilv~N 688 (771)
...+|+|++ ... -..+-+ ..+|+++++.|+|||.+++.
T Consensus 242 -------------------~~~~D~~~~----~~v-------lh~~~d~~~~~iL~~~~~al~pgg~lli~ 282 (353)
T 4a6d_A 242 -------------------LPEADLYIL----ARV-------LHDWADGKCSHLLERIYHTCKPGGGILVI 282 (353)
T ss_dssp -------------------CCCCSEEEE----ESS-------GGGSCHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred -------------------CCCceEEEe----eee-------cccCCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 134799987 110 111112 46799999999999977764
No 471
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.23 E-value=1.5e-05 Score=91.59 Aligned_cols=179 Identities=9% Similarity=0.044 Sum_probs=112.8
Q ss_pred CccccccchhHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhc--------C--------CCeEEEEcCCHHHHH
Q 004164 42 DSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--------G--------FHGITNVDFSKVVIS 105 (771)
Q Consensus 42 ~~~ew~~~~~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~--------g--------~~~V~~vDiS~~~i~ 105 (771)
....-|.....+...+.+++.. .+ .+|||++||+|.+...+++. + ..+++|+|+++.++.
T Consensus 222 k~~G~fyTP~~Vv~lmv~ll~p---~~-~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~ 297 (544)
T 3khk_A 222 KQGGQYYTPKSIVTLIVEMLEP---YK-GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWK 297 (544)
T ss_dssp CCSTTTCCCHHHHHHHHHHHCC---CS-EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHH
T ss_pred ccCCeEeCCHHHHHHHHHHHhc---CC-CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHH
Confidence 3344455667888888888864 33 49999999999988776432 1 237999999999998
Q ss_pred HHHHHhhcCCC--CcEEEEeecCCCC-CCCCCccEEEeccccccc--cC---------------------cccchHHHHH
Q 004164 106 DMLRRNVRDRS--DMRWRVMDMTSMQ-FMDETFDVILDKGGLDAL--ME---------------------PELGHKLGNQ 159 (771)
Q Consensus 106 ~~~~~~~~~~~--~i~~~~~D~~~l~-~~~~sFDlVi~~~~l~~l--~~---------------------~~~~~~~~~~ 159 (771)
.++..+...+. ++.+.++|....+ +.+.+||+|+++-.+..- .. +... ..--.
T Consensus 298 lA~~Nl~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~-~~~~~ 376 (544)
T 3khk_A 298 LAAMNMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTG-NANFA 376 (544)
T ss_dssp HHHHHHHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTT-CTHHH
T ss_pred HHHHHHHHhCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCc-chhHH
Confidence 77655443332 3334777766543 456799999987655421 00 0000 01125
Q ss_pred HHHHHHHccccCeEEEEEEcCc----c-hhhcchhhhh-ccCcEEEEeecCCCCCCCCCCccEEEEEEEcCC
Q 004164 160 YLSEVKRLLKSGGKFVCLTLAE----S-HVLGLLFPKF-RFGWKMSVHAIPQKSSSEPSLQTFMVVADKENS 225 (771)
Q Consensus 160 ~l~~i~rvLkpGG~~ii~~~~~----~-~~~~~l~~~~-~~~w~~~~~~i~~~~~~~~~l~~f~~v~~k~~~ 225 (771)
++..+.+.|+|||++.++.... . .....+.... ..++...+..++...=.....+..+++++|.+.
T Consensus 377 Fl~~~l~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~~~l~aII~LP~~lF~~t~i~t~Ilvl~K~k~ 448 (544)
T 3khk_A 377 WMLHMLYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQDLVECMVALPGQLFTNTQIPACIWFLTKDKN 448 (544)
T ss_dssp HHHHHHHTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHHHTTCEEEEEECCTTBCCSCSSCEEEEEEESCCS
T ss_pred HHHHHHHHhccCceEEEEecchhhhcCcchHHHHHHHHHhCCcHhEEEECCCCCCCCCCCCeEEEEEecCCC
Confidence 8899999999999998887431 1 1111222222 335555666776432223556778888888665
No 472
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.23 E-value=1.3e-06 Score=93.27 Aligned_cols=115 Identities=10% Similarity=0.171 Sum_probs=72.2
Q ss_pred CCCcEEEEeccccH-HHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-CCCC-----CeeEEEcchHH--HHHhhccCC
Q 004164 541 KSVKAVVIGLGAGL-LPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDK-----SLKVHITDGIK--FVREMKSSS 611 (771)
Q Consensus 541 ~~~~vLviGlG~G~-l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~-~~~~-----r~~v~i~Dg~~--~l~~~~~~~ 611 (771)
...+||+||+|+|. +..++.. +..+|++||+++.+++.|+++..- .... +++++++|... +-.++..
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~-- 123 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVRE-- 123 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHT--
T ss_pred CCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhc--
Confidence 35789999999995 4444443 235899999999999999998621 0010 25667776621 0011110
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEecc
Q 004164 612 ATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 691 (771)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 691 (771)
.....+||+|++-. .- .....+.+. ..+|+.++++|+|||+|++....
T Consensus 124 -------------------------~~~~~~FD~V~~~~-~l----hy~~~~~~~--~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 124 -------------------------VFYFGKFNIIDWQF-AI----HYSFHPRHY--ATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp -------------------------TCCSSCEEEEEEES-CG----GGTCSTTTH--HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -------------------------cccCCCeeEEEECc-hH----HHhCCHHHH--HHHHHHHHHHcCCCCEEEEEeCC
Confidence 00135799998621 10 001112232 68999999999999999987654
No 473
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.23 E-value=1.3e-06 Score=87.83 Aligned_cols=102 Identities=14% Similarity=0.129 Sum_probs=76.3
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
.+.+||+||+|.|.++..+... + .++++||+++.+++.|++.+. +++.+|..++...
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~~-------~~~~~d~~~~~~~-------------- 88 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKLD-------HVVLGDIETMDMP-------------- 88 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTSS-------EEEESCTTTCCCC--------------
T ss_pred CCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhCC-------cEEEcchhhcCCC--------------
Confidence 4578999999999999998888 5 799999999999999998762 6777877543111
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
....+||+|++.- ....+. -...+++.+++.|+|||.+++.....
T Consensus 89 -----------------~~~~~fD~v~~~~----~l~~~~------~~~~~l~~~~~~L~~gG~l~~~~~~~ 133 (230)
T 3cc8_A 89 -----------------YEEEQFDCVIFGD----VLEHLF------DPWAVIEKVKPYIKQNGVILASIPNV 133 (230)
T ss_dssp -----------------SCTTCEEEEEEES----CGGGSS------CHHHHHHHTGGGEEEEEEEEEEEECT
T ss_pred -----------------CCCCccCEEEECC----hhhhcC------CHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 1136799999731 111111 11689999999999999999977543
No 474
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.22 E-value=2.9e-06 Score=94.59 Aligned_cols=105 Identities=11% Similarity=0.028 Sum_probs=77.1
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHH-------Hhhc---CCCCCCCeeEEEcchHH---HHHh
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLA-------EDYF---GFTQDKSLKVHITDGIK---FVRE 606 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA-------~~~F---g~~~~~r~~v~i~Dg~~---~l~~ 606 (771)
....+||+||+|.|.++..+...++..+|++||+++.+++.| ++.+ |+. -.+++++.+|+.. .+..
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~-~~nV~~i~gD~~~~~~~~~~ 319 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR-LNNVEFSLKKSFVDNNRVAE 319 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC-CCCEEEEESSCSTTCHHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC-CCceEEEEcCcccccccccc
Confidence 345789999999999999999887777899999999999999 7664 421 1579999987752 1211
Q ss_pred hccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEE
Q 004164 607 MKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFI 686 (771)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv 686 (771)
.. ..||+|++...-- .+. -..+|+.+.+.|+|||.++
T Consensus 320 ~~--------------------------------~~FDvIvvn~~l~---------~~d--~~~~L~el~r~LKpGG~lV 356 (433)
T 1u2z_A 320 LI--------------------------------PQCDVILVNNFLF---------DED--LNKKVEKILQTAKVGCKII 356 (433)
T ss_dssp HG--------------------------------GGCSEEEECCTTC---------CHH--HHHHHHHHHTTCCTTCEEE
T ss_pred cc--------------------------------CCCCEEEEeCccc---------ccc--HHHHHHHHHHhCCCCeEEE
Confidence 11 4699999731110 111 2467889999999999998
Q ss_pred EE
Q 004164 687 VN 688 (771)
Q Consensus 687 ~N 688 (771)
+-
T Consensus 357 i~ 358 (433)
T 1u2z_A 357 SL 358 (433)
T ss_dssp ES
T ss_pred Ee
Confidence 74
No 475
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.21 E-value=6.1e-07 Score=94.41 Aligned_cols=100 Identities=11% Similarity=0.094 Sum_probs=78.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~-~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
....+||++|+|.|.++..+... +..+|++||+||..++.|++...+. -.++++++.+|++++..
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~------------- 189 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG------------- 189 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-------------
T ss_pred CCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-------------
Confidence 34578999999999888877776 4468999999999999999987321 25789999999987632
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEE
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 688 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~N 688 (771)
...||.|++|.- + ...+||..+.++|++||++.+-
T Consensus 190 ---------------------~~~~D~Vi~~~p-----------~---~~~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 190 ---------------------ENIADRILMGYV-----------V---RTHEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp ---------------------CSCEEEEEECCC-----------S---SGGGGHHHHHHHEEEEEEEEEE
T ss_pred ---------------------ccCCCEEEECCC-----------C---cHHHHHHHHHHHcCCCCEEEEE
Confidence 256999998531 1 1257899999999999998764
No 476
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.21 E-value=8.3e-07 Score=87.53 Aligned_cols=99 Identities=10% Similarity=0.103 Sum_probs=73.5
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~-~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
+.+.+||+||+|.|.++..+....|.++++++|+|+.++++|++.+... ...++++ .|...- ..
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~---~~---------- 112 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD---VY---------- 112 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH---HT----------
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc---CC----------
Confidence 5578999999999999999999999999999999999999999998321 1224554 566543 11
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccH--HHHHHHHHccCCCcEEE
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEG--SFLLTVKDALSEQGLFI 686 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~--~fl~~~~~~L~~~Gilv 686 (771)
...||+|+. .+. -++++. ..+..+.+.|+|+|+||
T Consensus 113 ---------------------~~~~DvVLa--~k~----------LHlL~~~~~al~~v~~~L~pggvfI 149 (200)
T 3fzg_A 113 ---------------------KGTYDVVFL--LKM----------LPVLKQQDVNILDFLQLFHTQNFVI 149 (200)
T ss_dssp ---------------------TSEEEEEEE--ETC----------HHHHHHTTCCHHHHHHTCEEEEEEE
T ss_pred ---------------------CCCcChhhH--hhH----------HHhhhhhHHHHHHHHHHhCCCCEEE
Confidence 267999997 222 122211 24558999999999988
No 477
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.21 E-value=9.8e-07 Score=89.84 Aligned_cols=108 Identities=23% Similarity=0.233 Sum_probs=78.8
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
.+.+||+||+|+|.++..+.... .++++||+++.+++.|++.+.- ...+++++.+|..++ .
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~s~~~~~~a~~~~~~-~~~~~~~~~~d~~~~----~------------ 97 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKF--KNTWAVDLSQEMLSEAENKFRS-QGLKPRLACQDISNL----N------------ 97 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGS--SEEEEECSCHHHHHHHHHHHHH-TTCCCEEECCCGGGC----C------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHCC--CcEEEEECCHHHHHHHHHHHhh-cCCCeEEEecccccC----C------------
Confidence 55799999999999988888873 5899999999999999998732 112789999988653 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEecc
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 691 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 691 (771)
. ..+||+|++..+.- ..+ +..---..+|+.+++.|+|||.+++.+..
T Consensus 98 -----------------~-~~~fD~v~~~~~~l---~~~---~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 98 -----------------I-NRKFDLITCCLDST---NYI---IDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp -----------------C-SCCEEEEEECTTGG---GGC---CSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred -----------------c-cCCceEEEEcCccc---ccc---CCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 0 15699999832110 000 00001267999999999999999997753
No 478
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.21 E-value=3.5e-06 Score=91.63 Aligned_cols=103 Identities=16% Similarity=0.235 Sum_probs=78.6
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-CCCCCeeEEEcchHHHHHhhccCCccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSV 618 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~-~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~ 618 (771)
....+||+||+|.|.++..+...+|..+++++|+ |.+++.|++.+.- ...++++++.+|..+ ...
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~---------- 247 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE---PLP---------- 247 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS---CCS----------
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC---CCC----------
Confidence 3457899999999999999999999889999999 9999999988621 124589999999854 111
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCccc---HHHHHHHHHccCCCcEEEEEe
Q 004164 619 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~---~~fl~~~~~~L~~~Gilv~Nl 689 (771)
..||+|++.- . -.++-+ ..+|+.+++.|+|||.+++.-
T Consensus 248 ----------------------~~~D~v~~~~--v---------l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 248 ----------------------RKADAIILSF--V---------LLNWPDHDAVRILTRCAEALEPGGRILIHE 288 (360)
T ss_dssp ----------------------SCEEEEEEES--C---------GGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ----------------------CCccEEEEcc--c---------ccCCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 2499998821 1 111222 379999999999999888653
No 479
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.19 E-value=1.9e-06 Score=95.36 Aligned_cols=73 Identities=8% Similarity=-0.124 Sum_probs=60.5
Q ss_pred CCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCHHHHHHHHHHhhcC--C-CCcEEEEeecCCC-CC-CCCCccEEEec
Q 004164 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRD--R-SDMRWRVMDMTSM-QF-MDETFDVILDK 141 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~~~i~~~~~~~~~~--~-~~i~~~~~D~~~l-~~-~~~sFDlVi~~ 141 (771)
++.+|||+|||+|..+..|+..+. +|+++|+|+.+++.+++.+... + .+++++++|+.+. +. ++++||+|++.
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 478999999999999999988875 9999999999999887666433 3 5799999999885 32 34689999974
No 480
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.19 E-value=4.5e-06 Score=91.67 Aligned_cols=106 Identities=13% Similarity=0.102 Sum_probs=77.3
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHh----------hcCCCCCCCeeEEEcchHHHHHhhcc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAED----------YFGFTQDKSLKVHITDGIKFVREMKS 609 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~----------~Fg~~~~~r~~v~i~Dg~~~l~~~~~ 609 (771)
....+||+||+|+|.++..+....+..+|++||+++.++++|++ .+|+. ..+++++.+|..+.--...
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~-~~rVefi~GD~~~lp~~d~- 249 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK-HAEYTLERGDFLSEEWRER- 249 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC-CCEEEEEECCTTSHHHHHH-
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC-CCCeEEEECcccCCccccc-
Confidence 44578999999999999998887776579999999999999986 24552 3589999999876421110
Q ss_pred CCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEE
Q 004164 610 SSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 688 (771)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~N 688 (771)
-..+|+|++. +. .. .+. -...|..+.+.|+|||.||+.
T Consensus 250 ------------------------------~~~aDVVf~N--n~-~F------~pd--l~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 250 ------------------------------IANTSVIFVN--NF-AF------GPE--VDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp ------------------------------HHTCSEEEEC--CT-TC------CHH--HHHHHHHHHTTSCTTCEEEES
T ss_pred ------------------------------cCCccEEEEc--cc-cc------Cch--HHHHHHHHHHcCCCCcEEEEe
Confidence 0358999982 11 00 111 245677888999999999974
No 481
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.19 E-value=1.7e-05 Score=78.77 Aligned_cols=117 Identities=19% Similarity=0.229 Sum_probs=81.6
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||++|+|+|.++..+.... ..+|++||+|+.+++.|++.+.... -+++++.+|+.++ .
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~d~~~~----~------------ 110 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEFK-GKFKVFIGDVSEF----N------------ 110 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGGT-TSEEEEESCGGGC----C------------
T ss_pred CcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcC-CCEEEEECchHHc----C------------
Confidence 45689999999999999888873 3489999999999999999874311 1799999998763 2
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCChhHHHHH
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMV 700 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~~~~~~~v 700 (771)
..||+|++|.--... ..-....+++.+.+.| +|++++.+. .....+.+
T Consensus 111 --------------------~~~D~v~~~~p~~~~--------~~~~~~~~l~~~~~~l--~~~~~~~~~--~~~~~~~~ 158 (207)
T 1wy7_A 111 --------------------SRVDIVIMNPPFGSQ--------RKHADRPFLLKAFEIS--DVVYSIHLA--KPEVRRFI 158 (207)
T ss_dssp --------------------CCCSEEEECCCCSSS--------STTTTHHHHHHHHHHC--SEEEEEEEC--CHHHHHHH
T ss_pred --------------------CCCCEEEEcCCCccc--------cCCchHHHHHHHHHhc--CcEEEEEeC--CcCCHHHH
Confidence 369999996421110 1123478899999988 677765532 23333444
Q ss_pred HHHHHHh
Q 004164 701 ISRMKMV 707 (771)
Q Consensus 701 ~~~l~~v 707 (771)
...+.+.
T Consensus 159 ~~~l~~~ 165 (207)
T 1wy7_A 159 EKFSWEH 165 (207)
T ss_dssp HHHHHHT
T ss_pred HHHHHHC
Confidence 4455443
No 482
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.18 E-value=3.4e-07 Score=93.66 Aligned_cols=102 Identities=14% Similarity=0.131 Sum_probs=76.0
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~-~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
...+||+||+|+|.++..+.... .+|++||+++.+++.|++.+... ..++++++.+|+.++..
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-------------- 141 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS-------------- 141 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG--------------
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc--------------
Confidence 46789999999999999998874 69999999999999999887321 13579999999998741
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEE
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 688 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~N 688 (771)
..+||+|++|.- ..+...+. ..+..+++.|+|||++++.
T Consensus 142 --------------------~~~~D~v~~~~~----~~~~~~~~------~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 142 --------------------FLKADVVFLSPP----WGGPDYAT------AETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp --------------------GCCCSEEEECCC----CSSGGGGG------SSSBCTTTSCSSCHHHHHH
T ss_pred --------------------cCCCCEEEECCC----cCCcchhh------hHHHHHHhhcCCcceeHHH
Confidence 157999998531 11111111 1445678889999987754
No 483
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.18 E-value=1.9e-06 Score=87.80 Aligned_cols=110 Identities=10% Similarity=-0.075 Sum_probs=75.8
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcC-HHHHHHH---HhhcCCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELD-LTMLNLA---EDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD-~~v~~vA---~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
...+||+||+|+|.++..|....|..+|++||++ +.|+++| ++...-..-++++++.+|+.++ ....
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l-~~~~-------- 94 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESL-PFEL-------- 94 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBC-CGGG--------
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHh-hhhc--------
Confidence 4568999999999999999887888899999999 8888887 6654211124689999998765 1100
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEE
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIV 687 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~ 687 (771)
...+|.|.+...-... . .........+|+.+++.|+|||.|++
T Consensus 95 -----------------------~d~v~~i~~~~~~~~~---~--~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 95 -----------------------KNIADSISILFPWGTL---L--EYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp -----------------------TTCEEEEEEESCCHHH---H--HHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred -----------------------cCeEEEEEEeCCCcHH---h--hhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 1457777663210000 0 00001236789999999999999998
No 484
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.18 E-value=1.7e-06 Score=89.74 Aligned_cols=100 Identities=15% Similarity=0.068 Sum_probs=74.8
Q ss_pred CCCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccccc
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 619 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~ 619 (771)
..+.+||+||+|+|.++..+.. +..+|++||++|.+++.|++.. +++++++|+.++ .
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~----~----------- 89 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYAENL----A----------- 89 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCT------TEEEECCCTTSC----C-----------
T ss_pred CCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcc------CCEEEECchhhC----C-----------
Confidence 4567999999999999998887 5679999999999999988765 689999988542 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEecc
Q 004164 620 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 691 (771)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 691 (771)
.....||+|++-.-- ..+ + --..+|+.+.+.|+ ||.+++-.+.
T Consensus 90 ------------------~~~~~fD~v~~~~~l----~~~----~--~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 90 ------------------LPDKSVDGVISILAI----HHF----S--HLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp ------------------SCTTCBSEEEEESCG----GGC----S--SHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred ------------------CCCCCEeEEEEcchH----hhc----c--CHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 113679999983210 001 1 12689999999999 9966654433
No 485
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.18 E-value=9.2e-07 Score=96.85 Aligned_cols=100 Identities=16% Similarity=0.224 Sum_probs=73.8
Q ss_pred CCCCcEEEEecc-------ccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHH--HHHhhccC
Q 004164 540 GKSVKAVVIGLG-------AGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIK--FVREMKSS 610 (771)
Q Consensus 540 ~~~~~vLviGlG-------~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~--~l~~~~~~ 610 (771)
.++.+||.||+| +|....++...+|..+|++||++|.+. + ..++++++++|+.+ |......
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~---~~~rI~fv~GDa~dlpf~~~l~~- 284 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V---DELRIRTIQGDQNDAEFLDRIAR- 284 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G---CBTTEEEEECCTTCHHHHHHHHH-
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h---cCCCcEEEEecccccchhhhhhc-
Confidence 356899999999 666666777778999999999999972 1 24789999999865 4433220
Q ss_pred CcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEE
Q 004164 611 SATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 688 (771)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~N 688 (771)
....||+|+.|.. . . ..+ ...+|+.+.+.|+|||+|++.
T Consensus 285 ----------------------------~d~sFDlVisdgs-H-~-------~~d--~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 285 ----------------------------RYGPFDIVIDDGS-H-I-------NAH--VRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp ----------------------------HHCCEEEEEECSC-C-C-------HHH--HHHHHHHHGGGEEEEEEEEEE
T ss_pred ----------------------------ccCCccEEEECCc-c-c-------chh--HHHHHHHHHHhcCCCeEEEEE
Confidence 0156999998531 1 0 111 267899999999999999985
No 486
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.18 E-value=1.5e-06 Score=90.22 Aligned_cols=86 Identities=12% Similarity=0.097 Sum_probs=64.0
Q ss_pred hHHHHHHHHhhCCCCCCCCCeEEEEcCCcchhHHHHHhcCCCe--EEEEcCCHHHHHHHHHHhhcCCCCcEEEEeecCCC
Q 004164 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHG--ITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM 128 (771)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDiGCG~G~ls~~La~~g~~~--V~~vDiS~~~i~~~~~~~~~~~~~i~~~~~D~~~l 128 (771)
+.+...+.+.+.. .++.+|||||||+|.++. +.. +. + |+++|+++.+++.++++... .++++++++|+.++
T Consensus 7 ~~i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~-l~~-~~-~~~v~avEid~~~~~~a~~~~~~-~~~v~~i~~D~~~~ 79 (252)
T 1qyr_A 7 QFVIDSIVSAINP---QKGQAMVEIGPGLAALTE-PVG-ER-LDQLTVIELDRDLAARLQTHPFL-GPKLTIYQQDAMTF 79 (252)
T ss_dssp HHHHHHHHHHHCC---CTTCCEEEECCTTTTTHH-HHH-TT-CSCEEEECCCHHHHHHHHTCTTT-GGGEEEECSCGGGC
T ss_pred HHHHHHHHHhcCC---CCcCEEEEECCCCcHHHH-hhh-CC-CCeEEEEECCHHHHHHHHHHhcc-CCceEEEECchhhC
Confidence 3455566666654 577899999999999999 754 43 6 99999999999988665532 35799999999998
Q ss_pred CCCCC-----CccEEEeccc
Q 004164 129 QFMDE-----TFDVILDKGG 143 (771)
Q Consensus 129 ~~~~~-----sFDlVi~~~~ 143 (771)
++++. ..|.|+++-.
T Consensus 80 ~~~~~~~~~~~~~~vvsNlP 99 (252)
T 1qyr_A 80 NFGELAEKMGQPLRVFGNLP 99 (252)
T ss_dssp CHHHHHHHHTSCEEEEEECC
T ss_pred CHHHhhcccCCceEEEECCC
Confidence 76432 3456666543
No 487
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.17 E-value=3.9e-06 Score=91.34 Aligned_cols=108 Identities=18% Similarity=0.186 Sum_probs=81.9
Q ss_pred CCCcEEEEeccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeeEEEcchHHHHHhhccCCccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 616 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiD~~v~~vA~~~F---g~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~ 616 (771)
...++|++|+|+|.++..+.... |..+|+++|+||.+++.|++.+ |+ + +++++.+|+.++...
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~--~-~i~~~~~D~~~~~~~---------- 269 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL--S-WIRFLRADARHLPRF---------- 269 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC--T-TCEEEECCGGGGGGT----------
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC--C-ceEEEeCChhhCccc----------
Confidence 45689999999999999998887 7789999999999999999986 54 2 799999999876221
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcC-CcCc--ccHHHHHHHHHccCCCcEEEEEe
Q 004164 617 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCP-AADF--VEGSFLLTVKDALSEQGLFIVNL 689 (771)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~p-p~~f--~~~~fl~~~~~~L~~~Gilv~Nl 689 (771)
...||+|++|.-- |.... ...+ +-..+++.+++.|+|||.+++-.
T Consensus 270 -----------------------~~~~D~Ii~npPy-----g~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 270 -----------------------FPEVDRILANPPH-----GLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp -----------------------CCCCSEEEECCCS-----CC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred -----------------------cCCCCEEEECCCC-----cCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 1358999996421 11100 1111 12679999999999999999754
No 488
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.17 E-value=4.5e-05 Score=80.73 Aligned_cols=148 Identities=20% Similarity=0.236 Sum_probs=96.6
Q ss_pred cCCCCcEEEEeccccHHH----HHHHHhCCCCcEEEEEcCHH-----------HHHHHHhhc----CCCCCC--CeeEEE
Q 004164 539 VGKSVKAVVIGLGAGLLP----MFLHECMPFVGIEAVELDLT-----------MLNLAEDYF----GFTQDK--SLKVHI 597 (771)
Q Consensus 539 ~~~~~~vLviGlG~G~l~----~~L~~~~p~~~i~~VEiD~~-----------v~~vA~~~F----g~~~~~--r~~v~i 597 (771)
.....+||.+|.|+|.-. ..+.+..|..+++.|.++.. .-++++..+ .+ ++. .++++.
T Consensus 94 ~~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~-~~~~v~L~l~~ 172 (308)
T 3vyw_A 94 ERKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEY-EGERLSLKVLL 172 (308)
T ss_dssp HCSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEE-ECSSEEEEEEE
T ss_pred CCCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccc-cCCcEEEEEEe
Confidence 355678999999999422 12345567666555544321 122222111 11 123 467889
Q ss_pred cchHHHHHhhccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHH
Q 004164 598 TDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKD 677 (771)
Q Consensus 598 ~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~ 677 (771)
||+.+.+.+.. +.++|+|++|.+++.. .+++++.++|+.+.+
T Consensus 173 GDa~~~l~~l~-------------------------------~~~~Da~flDgFsP~k-------NPeLWs~e~f~~l~~ 214 (308)
T 3vyw_A 173 GDARKRIKEVE-------------------------------NFKADAVFHDAFSPYK-------NPELWTLDFLSLIKE 214 (308)
T ss_dssp SCHHHHGGGCC-------------------------------SCCEEEEEECCSCTTT-------SGGGGSHHHHHHHHT
T ss_pred chHHHHHhhhc-------------------------------ccceeEEEeCCCCccc-------CcccCCHHHHHHHHH
Confidence 99999988764 2479999999999853 678999999999999
Q ss_pred ccCCCcEEEEEeccCChhHHHHHHHHHHHhccceEEeeecCCccEEEEEecCCC
Q 004164 678 ALSEQGLFIVNLVSRSQATKDMVISRMKMVFNHLFCLQLEEDVNLVLFGLSSES 731 (771)
Q Consensus 678 ~L~~~Gilv~Nl~~~~~~~~~~v~~~l~~vF~~v~~~~~~~~~N~Vl~a~~~~~ 731 (771)
+++|||+|+ ..+.... |-..|+++==.|...+-...--+.++|+....
T Consensus 215 ~~~pgg~la--TYtaag~----VRR~L~~aGF~V~k~~G~g~KReml~A~~~~~ 262 (308)
T 3vyw_A 215 RIDEKGYWV--SYSSSLS----VRKSLLTLGFKVGSSREIGRKRKGTVASLKAP 262 (308)
T ss_dssp TEEEEEEEE--ESCCCHH----HHHHHHHTTCEEEEEECC---CEEEEEESSSC
T ss_pred HhCCCcEEE--EEeCcHH----HHHHHHHCCCEEEecCCCCCCCceeEEecCCC
Confidence 999999998 4555554 33456666445666654334456788876543
No 489
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.16 E-value=2.6e-06 Score=93.92 Aligned_cols=100 Identities=14% Similarity=0.083 Sum_probs=77.0
Q ss_pred CCCeEEEEcCCcchhHHHHHhc--CCCeEEEEcCCHHHHHHHHHHhhcCC-CC--cEEEEeecCCCC--CCCCCccEEEe
Q 004164 68 PPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SD--MRWRVMDMTSMQ--FMDETFDVILD 140 (771)
Q Consensus 68 ~~~~ILDiGCG~G~ls~~La~~--g~~~V~~vDiS~~~i~~~~~~~~~~~-~~--i~~~~~D~~~l~--~~~~sFDlVi~ 140 (771)
++.+|||++||+|.++..++.. |..+|+++|+++.+++.+++.....+ .+ ++++++|+.++- ...+.||+|+.
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 5789999999999999999885 44689999999999998876665444 23 899999986642 12467999996
Q ss_pred ccccccccCcccchHHHHHHHHHHHHccccCeEEEEEE
Q 004164 141 KGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 178 (771)
Q Consensus 141 ~~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~ii~~ 178 (771)
.- .... ..++..+.+.|++||+++++.
T Consensus 132 DP----~g~~-------~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DP----FGTP-------VPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CC----SSCC-------HHHHHHHHHHEEEEEEEEEEE
T ss_pred CC----CcCH-------HHHHHHHHHHhCCCCEEEEEe
Confidence 54 1111 368889999999999776665
No 490
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.14 E-value=4.3e-06 Score=86.65 Aligned_cols=103 Identities=16% Similarity=0.198 Sum_probs=76.3
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||+||+|+|.++..|... ..++++||+++.+++.|++... . .++.+|+.+. .
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~---~---~~~~~d~~~~----~------------ 109 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV---K---NVVEAKAEDL----P------------ 109 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC---S---CEEECCTTSC----C------------
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC---C---CEEECcHHHC----C------------
Confidence 4578999999999999988876 3589999999999999999864 1 2777776542 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEeccCC
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 693 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~~~ 693 (771)
.....||+|++...-- .. ... -..+|+.+++.|+|||.+++...+..
T Consensus 110 -----------------~~~~~fD~v~~~~~~~------~~-~~~--~~~~l~~~~~~LkpgG~l~~~~~~~~ 156 (260)
T 2avn_A 110 -----------------FPSGAFEAVLALGDVL------SY-VEN--KDKAFSEIRRVLVPDGLLIATVDNFY 156 (260)
T ss_dssp -----------------SCTTCEEEEEECSSHH------HH-CSC--HHHHHHHHHHHEEEEEEEEEEEEBHH
T ss_pred -----------------CCCCCEEEEEEcchhh------hc-ccc--HHHHHHHHHHHcCCCeEEEEEeCChH
Confidence 1136799999721000 00 011 47899999999999999999876543
No 491
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.14 E-value=6e-05 Score=86.51 Aligned_cols=182 Identities=11% Similarity=-0.005 Sum_probs=116.4
Q ss_pred ccccccchhHHHHHHHHhhCCCC-CCCCCeEEEEcCCcchhHHHHHhc----CCCeEEEEcCCHHHHHHHHHHhhcCC--
Q 004164 43 SFEWYAEWPQLRDPLISLIGAPT-SSPPPQILVPGCGNSRLSEHLYDA----GFHGITNVDFSKVVISDMLRRNVRDR-- 115 (771)
Q Consensus 43 ~~ew~~~~~~l~~~l~~~l~~~~-~~~~~~ILDiGCG~G~ls~~La~~----g~~~V~~vDiS~~~i~~~~~~~~~~~-- 115 (771)
...-|.....+...+.+++.... +.++.+|||++||+|.+...+++. +..+++|+|+++.++..++..+.-.+
T Consensus 195 ~~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~ 274 (542)
T 3lkd_A 195 KAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP 274 (542)
T ss_dssp CCSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred cCCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC
Confidence 33445556678888888876311 246789999999999998777765 24589999999999987765543333
Q ss_pred -CCcEEEEeecCCC--C-CCCCCccEEEeccccccccCccc-----------c-----hHHHHHHHHHHHHccc-cCeEE
Q 004164 116 -SDMRWRVMDMTSM--Q-FMDETFDVILDKGGLDALMEPEL-----------G-----HKLGNQYLSEVKRLLK-SGGKF 174 (771)
Q Consensus 116 -~~i~~~~~D~~~l--~-~~~~sFDlVi~~~~l~~l~~~~~-----------~-----~~~~~~~l~~i~rvLk-pGG~~ 174 (771)
.++.+.++|.... | +....||+|+++-.+..-..... + ...--.++..+.+.|+ +||++
T Consensus 275 ~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~ 354 (542)
T 3lkd_A 275 IENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVM 354 (542)
T ss_dssp GGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEE
T ss_pred cCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeE
Confidence 3578899998876 3 45678999998754431110000 0 0001258999999999 99999
Q ss_pred EEEEcCcchh----hcchhhhh-ccCcEEEEeecCCCCCCCCCCccEEEEEEEcC
Q 004164 175 VCLTLAESHV----LGLLFPKF-RFGWKMSVHAIPQKSSSEPSLQTFMVVADKEN 224 (771)
Q Consensus 175 ii~~~~~~~~----~~~l~~~~-~~~w~~~~~~i~~~~~~~~~l~~f~~v~~k~~ 224 (771)
.++....--+ ...+.... ..++...+..++..-=.....+..+++++|.+
T Consensus 355 a~VlP~g~Lf~~~~~~~iRk~Lle~~~l~~II~LP~~lF~~t~i~t~Ilvl~K~k 409 (542)
T 3lkd_A 355 AIVLPHGVLFRGNAEGTIRKALLEEGAIDTVIGLPANIFFNTSIPTTVIILKKNR 409 (542)
T ss_dssp EEEEETHHHHCCTHHHHHHHHHHHTTCEEEEEECCSSCSSSCCCCEEEEEECSSC
T ss_pred EEEecchHhhCCchhHHHHHHHHhCCceeEEEEccccccCCCCCcEEEEEEecCC
Confidence 8887542111 11222222 33555566667643222455667888887755
No 492
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.13 E-value=2.6e-05 Score=77.17 Aligned_cols=95 Identities=13% Similarity=0.185 Sum_probs=70.7
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCccccccccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 620 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~~~~ 620 (771)
...+||++|+|+|.++..+... +..+|++||+|+.+++.|++.+. +++++.+|+.++ .
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~----~------------ 108 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEI----S------------ 108 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGC----C------------
T ss_pred CCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHC----C------------
Confidence 4578999999999999988877 54579999999999999999875 689999998763 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEE
Q 004164 621 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIV 687 (771)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~ 687 (771)
.+||+|++|.--.. . ..-....+++.+.+.| |+++++
T Consensus 109 --------------------~~~D~v~~~~p~~~----~----~~~~~~~~l~~~~~~~--g~~~~~ 145 (200)
T 1ne2_A 109 --------------------GKYDTWIMNPPFGS----V----VKHSDRAFIDKAFETS--MWIYSI 145 (200)
T ss_dssp --------------------CCEEEEEECCCC---------------CHHHHHHHHHHE--EEEEEE
T ss_pred --------------------CCeeEEEECCCchh----c----cCchhHHHHHHHHHhc--CcEEEE
Confidence 46999999531110 0 1112367899999998 454443
No 493
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.12 E-value=1.8e-06 Score=92.10 Aligned_cols=117 Identities=13% Similarity=0.067 Sum_probs=79.7
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-------CCCCeeEEEcchHHHHHhhccCCcc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-------QDKSLKVHITDGIKFVREMKSSSAT 613 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~-------~~~r~~v~i~Dg~~~l~~~~~~~~~ 613 (771)
.+.+||+||+|+|.+...+... +..++++||+++.+++.|++.+.-. ...+++++++|..+..-...
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~----- 107 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDK----- 107 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTT-----
T ss_pred CCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhh-----
Confidence 5578999999999888877774 5679999999999999999886310 13478999999865310000
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCc-ccHHHHHHHHHccCCCcEEEEEeccC
Q 004164 614 DEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF-VEGSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f-~~~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
+ ......||+|++.. . ... | .... --..+|+.+++.|+|||+|++.....
T Consensus 108 -----~-----------------~~~~~~fD~V~~~~--~--l~~--~-~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 108 -----F-----------------RDPQMCFDICSCQF--V--CHY--S-FESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp -----C-----------------SSTTCCEEEEEEET--C--GGG--G-GGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred -----c-----------------ccCCCCEEEEEEec--c--hhh--c-cCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 0 00124799999832 1 000 0 0011 11589999999999999999987543
No 494
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.11 E-value=5e-06 Score=96.45 Aligned_cols=100 Identities=19% Similarity=0.115 Sum_probs=72.8
Q ss_pred CCeEEEEcCCcchhHHHHHhc---CCC--eEEEEcCCHHHHHHHHHHhhc--CCCCcEEEEeecCCCCCCCCCccEEEec
Q 004164 69 PPQILVPGCGNSRLSEHLYDA---GFH--GITNVDFSKVVISDMLRRNVR--DRSDMRWRVMDMTSMQFMDETFDVILDK 141 (771)
Q Consensus 69 ~~~ILDiGCG~G~ls~~La~~---g~~--~V~~vDiS~~~i~~~~~~~~~--~~~~i~~~~~D~~~l~~~~~sFDlVi~~ 141 (771)
...|||+|||+|.++...+++ +.. +|++|+-|+.+.. +++.... ....|+++.+|+++...+ +++|+|++.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~-a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSE 435 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVV-TLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSE 435 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHH-HHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHH-HHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEE
Confidence 357999999999996544443 322 6899999997664 4443322 336799999999998776 789999987
Q ss_pred cccccccCcccchHHHHHHHHHHHHccccCeEEE
Q 004164 142 GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFV 175 (771)
Q Consensus 142 ~~l~~l~~~~~~~~~~~~~l~~i~rvLkpGG~~i 175 (771)
..-+.+. .+. +..++....|.|||||+++
T Consensus 436 wMG~fLl-~E~----mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 436 LLGSFAD-NEL----SPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCBTTBG-GGC----HHHHHHHHGGGEEEEEEEE
T ss_pred cCccccc-ccC----CHHHHHHHHHhcCCCcEEc
Confidence 6544433 221 3467888899999999875
No 495
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.11 E-value=4.3e-06 Score=86.99 Aligned_cols=113 Identities=15% Similarity=0.141 Sum_probs=78.1
Q ss_pred CCCCcEEEEeccccHHHHHHHHhC-CCCcEEEEEcCHH------HHHHHHhhcCC-CCCCCeeEEEcchHHHHHhhccCC
Q 004164 540 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLT------MLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSS 611 (771)
Q Consensus 540 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiD~~------v~~vA~~~Fg~-~~~~r~~v~i~Dg~~~l~~~~~~~ 611 (771)
....+||+||+|.|.++..+...+ |..+|++||+++. +++.|++.+.- ...++++++.+| ++.....
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~--- 116 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT--NLSDDLG--- 116 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC--CTTTCCG---
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC--hhhhccC---
Confidence 455789999999999999988885 6679999999997 99999998732 123679999998 2211100
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCcccHHHHHHHHHccCCCcEEEEEecc
Q 004164 612 ATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 691 (771)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~~~Gilv~Nl~~ 691 (771)
+....+||+|++.- . ...+ +. ...+++.++.+++|||.+++.-+.
T Consensus 117 -------------------------~~~~~~fD~v~~~~--~--l~~~--~~----~~~~~~~~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 117 -------------------------PIADQHFDRVVLAH--S--LWYF--AS----ANALALLFKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp -------------------------GGTTCCCSEEEEES--C--GGGS--SC----HHHHHHHHHHHTTTCSEEEEEEEC
T ss_pred -------------------------CCCCCCEEEEEEcc--c--hhhC--CC----HHHHHHHHHHHhCCCCEEEEEEec
Confidence 01136799999732 1 0001 11 134777778878889999987654
Q ss_pred C
Q 004164 692 R 692 (771)
Q Consensus 692 ~ 692 (771)
.
T Consensus 162 ~ 162 (275)
T 3bkx_A 162 M 162 (275)
T ss_dssp S
T ss_pred C
Confidence 4
No 496
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.11 E-value=1.1e-06 Score=91.69 Aligned_cols=79 Identities=13% Similarity=0.089 Sum_probs=61.2
Q ss_pred CCCCeEEEEcCCcchhHHHHHhcCCCeEEEEcCCH-------HHHHHHHHHhhcCC--CCcEEEEeecCCC-C-CCC--C
Q 004164 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSK-------VVISDMLRRNVRDR--SDMRWRVMDMTSM-Q-FMD--E 133 (771)
Q Consensus 67 ~~~~~ILDiGCG~G~ls~~La~~g~~~V~~vDiS~-------~~i~~~~~~~~~~~--~~i~~~~~D~~~l-~-~~~--~ 133 (771)
.++.+|||+|||+|.++..|+..|. +|+++|+|+ .+++.+++.....+ .+++++++|+.++ + +++ +
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred CCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 3568999999999999999999876 899999999 88887755432222 3599999999875 3 444 7
Q ss_pred CccEEEecccccc
Q 004164 134 TFDVILDKGGLDA 146 (771)
Q Consensus 134 sFDlVi~~~~l~~ 146 (771)
+||+|++.-.+.+
T Consensus 161 ~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 161 KPDIVYLDPMYPE 173 (258)
T ss_dssp CCSEEEECCCC--
T ss_pred CccEEEECCCCCC
Confidence 8999998765544
No 497
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.10 E-value=1.2e-06 Score=90.44 Aligned_cols=62 Identities=19% Similarity=0.098 Sum_probs=51.5
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-CCCCCeeEEEcchHH
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIK 602 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~-~~~~r~~v~i~Dg~~ 602 (771)
.+.+||+||+|+|.+...+....|..+|++||+++.+++.|++.... ...++++++.+|+.+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 127 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKT 127 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhh
Confidence 45689999999999888888777778999999999999999998721 124579999999765
No 498
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.09 E-value=2.1e-05 Score=82.26 Aligned_cols=119 Identities=13% Similarity=0.138 Sum_probs=80.4
Q ss_pred CCCcEEEEeccc---cHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeeEEEcchHHHHHhhccCCcccccc
Q 004164 541 KSVKAVVIGLGA---GLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMS 617 (771)
Q Consensus 541 ~~~~vLviGlG~---G~l~~~L~~~~p~~~i~~VEiD~~v~~vA~~~Fg~~~~~r~~v~i~Dg~~~l~~~~~~~~~~~~~ 617 (771)
...++|+||+|. |.+...+....|..+|++||+||.|++.||..+.-....+++++.+|..+.-.-..... .+ .
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~-~~--~ 154 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPE-LR--D 154 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHH-HH--T
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccc-cc--c
Confidence 346899999995 66777777788999999999999999999998853223579999999987521110000 00 0
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCccc-----HHHHHHHHHccCCCcEEEEEeccC
Q 004164 618 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE-----GSFLLTVKDALSEQGLFIVNLVSR 692 (771)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~-----~~fl~~~~~~L~~~Gilv~Nl~~~ 692 (771)
.+ . -+..+++++. . .-+|+. ...++.+.+.|+|||.|++...+.
T Consensus 155 ~~-----------------D-~~~p~av~~~----a---------vLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 155 TL-----------------D-LTRPVALTVI----A---------IVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp TC-----------------C-TTSCCEEEEE----S---------CGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred cc-----------------C-cCCcchHHhh----h---------hHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 00 0 0122334433 1 223332 468999999999999999987776
Q ss_pred C
Q 004164 693 S 693 (771)
Q Consensus 693 ~ 693 (771)
+
T Consensus 204 d 204 (277)
T 3giw_A 204 E 204 (277)
T ss_dssp T
T ss_pred C
Confidence 5
No 499
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.09 E-value=1.6e-05 Score=83.63 Aligned_cols=124 Identities=17% Similarity=0.158 Sum_probs=79.1
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEc-CHHHHHHHHhhc-----CCCC-C----CCeeEEEcc---hHHHHH-
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVEL-DLTMLNLAEDYF-----GFTQ-D----KSLKVHITD---GIKFVR- 605 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEi-D~~v~~vA~~~F-----g~~~-~----~r~~v~i~D---g~~~l~- 605 (771)
...+||+||+|+|.++..+.... ..+|++||+ ++.+++.|++.. .... + ++++++..| ...-+.
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 45689999999999998888763 348999999 999999999887 2110 1 367777433 222221
Q ss_pred hhccCCcccccccccccccccCCCCCCCCCCCCCCCceeEEEE-eCCCCCCCCCCCcCCcCcccHHHHHHHHHccC---C
Q 004164 606 EMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILII-DVDSPDSSSGMTCPAADFVEGSFLLTVKDALS---E 681 (771)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~-D~~s~d~~~g~s~pp~~f~~~~fl~~~~~~L~---~ 681 (771)
... ..+||+|+. |+.-. ++ .-..+++.++++|+ |
T Consensus 158 ~~~-------------------------------~~~fD~Ii~~dvl~~---------~~--~~~~ll~~l~~~Lk~~~p 195 (281)
T 3bzb_A 158 CTG-------------------------------LQRFQVVLLADLLSF---------HQ--AHDALLRSVKMLLALPAN 195 (281)
T ss_dssp HHS-------------------------------CSSBSEEEEESCCSC---------GG--GHHHHHHHHHHHBCCTTT
T ss_pred hcc-------------------------------CCCCCEEEEeCcccC---------hH--HHHHHHHHHHHHhcccCC
Confidence 111 257999987 44221 11 13679999999999 9
Q ss_pred --CcEEEEEeccCChh---HHHHHHHHHHHh
Q 004164 682 --QGLFIVNLVSRSQA---TKDMVISRMKMV 707 (771)
Q Consensus 682 --~Gilv~Nl~~~~~~---~~~~v~~~l~~v 707 (771)
||.+++-+..+... ....++..+++.
T Consensus 196 ~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~ 226 (281)
T 3bzb_A 196 DPTAVALVTFTHHRPHLAERDLAFFRLVNAD 226 (281)
T ss_dssp CTTCEEEEEECC--------CTHHHHHHHHS
T ss_pred CCCCEEEEEEEeeecccchhHHHHHHHHHhc
Confidence 99877755443321 123445555554
No 500
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.09 E-value=3.2e-06 Score=90.24 Aligned_cols=126 Identities=17% Similarity=0.129 Sum_probs=86.4
Q ss_pred CCCcEEEEeccccHHHHHHHHhCCCCcEEEEEc----CHHHHHHH-HhhcCCCCCCCeeEEEc-chHHHHHhhccCCccc
Q 004164 541 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVEL----DLTMLNLA-EDYFGFTQDKSLKVHIT-DGIKFVREMKSSSATD 614 (771)
Q Consensus 541 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEi----D~~v~~vA-~~~Fg~~~~~r~~v~i~-Dg~~~l~~~~~~~~~~ 614 (771)
...+||+||+|.|.++.+|.+. .+|++||+ .+..++.+ .+..+ .+++.++.+ |...+ .
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~D~~~l----~------ 145 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIPMSTYG---WNLVRLQSGVDVFFI----P------ 145 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCCCCSTT---GGGEEEECSCCTTTS----C------
T ss_pred CCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHHhhhcC---CCCeEEEeccccccC----C------
Confidence 3468999999999999999887 37999999 45333221 11111 256888877 66532 1
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCceeEEEEeCCCCCCCCCCCcCCcCccc----HHHHHHHHHccCCCcEEEEEec
Q 004164 615 EMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE----GSFLLTVKDALSEQGLFIVNLV 690 (771)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi~D~~s~d~~~g~s~pp~~f~~----~~fl~~~~~~L~~~Gilv~Nl~ 690 (771)
..+||+|+.|+... .|. .+.+ ..+|..+.+.|+|||.|++.+.
T Consensus 146 -------------------------~~~fD~V~sd~~~~---~g~-----~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 146 -------------------------PERCDTLLCDIGES---SPN-----PTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp -------------------------CCCCSEEEECCCCC---CSS-----HHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred -------------------------cCCCCEEEECCccc---cCc-----chhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 24799999986332 111 1111 1478889999999999999887
Q ss_pred cCChhHHHHHHHHHHHhccceEEee
Q 004164 691 SRSQATKDMVISRMKMVFNHLFCLQ 715 (771)
Q Consensus 691 ~~~~~~~~~v~~~l~~vF~~v~~~~ 715 (771)
.........++..++..|..+....
T Consensus 193 ~~~~~~~~~~l~~l~~~f~~v~~~k 217 (305)
T 2p41_A 193 NPYMSSVIEKMEALQRKHGGALVRN 217 (305)
T ss_dssp CCCSHHHHHHHHHHHHHHCCEEECC
T ss_pred CCCCchHHHHHHHHHHHcCCEEEec
Confidence 6654445677888999999876644
Done!