Query 004165
Match_columns 770
No_of_seqs 556 out of 4513
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 16:21:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004165.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004165hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 2.1E-53 7.3E-58 474.2 36.1 381 43-577 5-387 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 7.1E-51 2.4E-55 453.9 36.0 353 42-531 37-390 (437)
3 4g8k_A 2-5A-dependent ribonucl 100.0 5.8E-39 2E-43 344.7 28.3 280 132-531 24-314 (337)
4 3utm_A Tankyrase-1; tankyrase, 100.0 7.6E-39 2.6E-43 345.1 29.1 278 133-527 24-322 (351)
5 1wdy_A 2-5A-dependent ribonucl 100.0 1.4E-38 4.7E-43 332.3 29.3 268 133-516 5-284 (285)
6 4g8k_A 2-5A-dependent ribonucl 100.0 3.5E-38 1.2E-42 338.6 29.8 239 49-316 22-278 (337)
7 3d9h_A CDNA FLJ77766, highly s 100.0 5.2E-38 1.8E-42 328.7 25.2 244 130-528 12-265 (285)
8 3utm_A Tankyrase-1; tankyrase, 100.0 1.9E-37 6.4E-42 334.2 28.0 330 45-530 17-351 (351)
9 2xai_A ASB-9, ankyrin repeat a 100.0 1E-37 3.5E-42 322.1 23.3 245 132-531 2-251 (261)
10 2fo1_E LIN-12 protein; beta-ba 100.0 4E-38 1.4E-42 342.8 16.7 308 52-531 37-359 (373)
11 2xai_A ASB-9, ankyrin repeat a 100.0 4.7E-37 1.6E-41 317.2 22.1 242 166-577 2-248 (261)
12 1wdy_A 2-5A-dependent ribonucl 100.0 3.9E-36 1.3E-40 313.6 27.6 241 50-319 3-261 (285)
13 2fo1_E LIN-12 protein; beta-ba 100.0 2.1E-37 7.3E-42 337.0 16.0 280 54-505 68-369 (373)
14 3d9h_A CDNA FLJ77766, highly s 100.0 3.9E-36 1.3E-40 314.4 23.8 258 93-505 14-276 (285)
15 3b7b_A Euchromatic histone-lys 100.0 9.4E-36 3.2E-40 302.5 24.1 220 159-531 3-223 (237)
16 1yyh_A HN1;, notch 1, ankyrin 100.0 8.1E-36 2.8E-40 306.4 22.9 225 132-505 9-246 (253)
17 3ljn_A Hypothetical protein; a 100.0 2.1E-36 7.3E-41 328.3 19.0 249 131-531 18-302 (364)
18 3ljn_A Hypothetical protein; a 100.0 5.3E-37 1.8E-41 333.1 13.3 235 42-304 10-271 (364)
19 1k1a_A B-cell lymphoma 3-encod 100.0 1.9E-35 6.7E-40 300.8 21.6 163 131-304 7-177 (241)
20 1yyh_A HN1;, notch 1, ankyrin 100.0 1.2E-35 4.1E-40 305.2 19.4 241 44-302 2-248 (253)
21 1oy3_D Transcription factor in 100.0 2.8E-35 9.4E-40 307.1 22.0 253 160-530 2-270 (282)
22 3aji_A 26S proteasome non-ATPa 100.0 6.9E-35 2.4E-39 294.9 23.8 224 132-505 5-228 (231)
23 1k1a_A B-cell lymphoma 3-encod 100.0 6.5E-35 2.2E-39 296.9 23.4 219 160-531 2-229 (241)
24 1s70_B 130 kDa myosin-binding 100.0 1.9E-34 6.4E-39 303.8 23.3 264 139-528 4-275 (299)
25 3b7b_A Euchromatic histone-lys 100.0 3E-34 1E-38 291.4 23.9 227 44-298 3-231 (237)
26 4b93_B Ankyrin repeat domain-c 100.0 3.1E-35 1.1E-39 304.3 15.9 176 130-316 8-190 (269)
27 2dzn_A Probable 26S proteasome 100.0 7.3E-34 2.5E-38 286.6 23.7 211 167-529 2-219 (228)
28 2dzn_A Probable 26S proteasome 100.0 1E-33 3.5E-38 285.5 24.0 174 133-316 2-179 (228)
29 1oy3_D Transcription factor in 100.0 2.5E-33 8.6E-38 292.3 22.2 221 87-322 2-269 (282)
30 4b93_B Ankyrin repeat domain-c 100.0 8.2E-34 2.8E-38 293.6 17.2 221 89-322 6-229 (269)
31 3kea_A K1L; tropism, ANK repea 100.0 4.1E-33 1.4E-37 291.4 22.5 226 141-531 7-234 (285)
32 1sw6_A Regulatory protein SWI6 100.0 5E-34 1.7E-38 304.5 13.3 286 74-529 32-327 (327)
33 3aji_A 26S proteasome non-ATPa 100.0 8E-33 2.7E-37 279.7 21.4 225 50-302 4-230 (231)
34 3eu9_A Huntingtin-interacting 100.0 1.3E-32 4.6E-37 279.2 22.9 232 160-505 2-233 (240)
35 3eu9_A Huntingtin-interacting 100.0 3.2E-32 1.1E-36 276.4 22.9 231 46-303 3-236 (240)
36 2f8y_A Notch homolog 1, transl 100.0 1.6E-32 5.4E-37 275.9 20.0 212 144-505 2-214 (223)
37 3kea_A K1L; tropism, ANK repea 100.0 8.5E-33 2.9E-37 289.0 18.3 187 103-313 9-196 (285)
38 1s70_B 130 kDa myosin-binding 100.0 1.3E-32 4.3E-37 289.8 19.0 279 99-503 4-285 (299)
39 2f8y_A Notch homolog 1, transl 100.0 1.3E-31 4.3E-36 269.3 21.3 213 74-304 4-218 (223)
40 2rfa_A Transient receptor pote 100.0 6.8E-31 2.3E-35 265.7 22.6 161 133-304 3-185 (232)
41 1ikn_D Protein (I-kappa-B-alph 100.0 2.6E-32 8.9E-37 277.0 12.1 222 161-530 2-231 (236)
42 2rfa_A Transient receptor pote 100.0 1.3E-30 4.3E-35 263.7 20.9 146 166-322 2-165 (232)
43 4gpm_A Engineered protein OR26 100.0 3.4E-30 1.1E-34 246.2 18.8 158 135-304 6-163 (169)
44 1sw6_A Regulatory protein SWI6 100.0 3.8E-31 1.3E-35 282.2 13.3 240 42-322 42-327 (327)
45 3hra_A Ankyrin repeat family p 100.0 7.7E-30 2.6E-34 251.8 21.4 197 165-505 3-201 (201)
46 3hra_A Ankyrin repeat family p 100.0 1E-29 3.4E-34 251.0 21.8 180 132-322 4-189 (201)
47 1ikn_D Protein (I-kappa-B-alph 100.0 1E-30 3.6E-35 265.2 15.1 220 47-320 3-228 (236)
48 2pnn_A Transient receptor pote 100.0 2.4E-30 8.2E-35 268.7 16.4 222 83-315 2-271 (273)
49 2pnn_A Transient receptor pote 100.0 9.2E-30 3.1E-34 264.3 16.1 164 130-304 10-220 (273)
50 2etb_A Transient receptor pote 100.0 4.8E-30 1.6E-34 263.8 13.5 160 133-303 2-207 (256)
51 2etb_A Transient receptor pote 100.0 2.1E-29 7.3E-34 258.9 14.1 199 94-304 2-248 (256)
52 3jxi_A Vanilloid receptor-rela 100.0 5E-29 1.7E-33 256.7 13.9 201 93-304 4-252 (260)
53 3v30_A DNA-binding protein rfx 100.0 1.8E-28 6E-33 235.7 16.6 170 133-314 2-171 (172)
54 4gpm_A Engineered protein OR26 100.0 4.3E-28 1.5E-32 231.6 18.9 161 92-270 3-163 (169)
55 3jxi_A Vanilloid receptor-rela 100.0 6.5E-29 2.2E-33 255.9 14.2 162 132-304 4-212 (260)
56 3v31_A Ankyrin repeat family A 99.9 3.5E-27 1.2E-31 225.4 17.0 161 132-304 2-162 (167)
57 4hbd_A KN motif and ankyrin re 99.9 3.1E-27 1.1E-31 245.5 17.6 194 97-301 80-274 (276)
58 3f6q_A Integrin-linked protein 99.9 6.7E-27 2.3E-31 226.3 17.1 161 133-304 5-165 (179)
59 2rfm_A Putative ankyrin repeat 99.9 5.6E-27 1.9E-31 229.6 16.7 158 131-300 33-190 (192)
60 4hbd_A KN motif and ankyrin re 99.9 2.6E-27 8.9E-32 246.1 14.3 193 167-505 76-273 (276)
61 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.2E-26 4.2E-31 222.2 17.9 157 132-300 13-169 (169)
62 2vge_A RELA-associated inhibit 99.9 1.4E-28 4.9E-33 247.9 4.0 202 190-535 1-205 (229)
63 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.6E-26 5.4E-31 219.5 17.3 157 133-302 5-162 (162)
64 3twr_A Tankyrase-2; ankyrin re 99.9 4.8E-27 1.6E-31 224.0 13.3 158 132-301 7-164 (165)
65 2aja_A Ankyrin repeat family p 99.9 3.4E-29 1.2E-33 269.9 -2.8 282 97-532 69-363 (376)
66 3v30_A DNA-binding protein rfx 99.9 2.3E-26 7.9E-31 220.9 16.8 170 209-521 2-171 (172)
67 1bd8_A P19INK4D CDK4/6 inhibit 99.9 4.8E-26 1.6E-30 214.8 17.5 154 133-299 2-155 (156)
68 2rfm_A Putative ankyrin repeat 99.9 4.3E-26 1.5E-30 223.3 17.0 152 159-322 27-178 (192)
69 1awc_B Protein (GA binding pro 99.9 1.4E-25 4.8E-30 210.9 17.6 150 134-296 3-152 (153)
70 3v31_A Ankyrin repeat family A 99.9 1.7E-25 5.9E-30 213.6 17.9 145 166-322 2-146 (167)
71 2vge_A RELA-associated inhibit 99.9 3.9E-28 1.3E-32 244.7 -0.6 181 128-323 16-200 (229)
72 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.1E-25 3.9E-30 213.6 16.2 157 208-505 4-160 (162)
73 2y1l_E Darpin-8.4; hydrolase-i 99.9 4.5E-25 1.5E-29 211.3 18.1 160 205-505 10-169 (169)
74 2aja_A Ankyrin repeat family p 99.9 6.2E-28 2.1E-32 260.1 -2.5 197 52-292 65-269 (376)
75 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.3E-26 4.3E-31 235.5 4.1 141 165-318 3-144 (239)
76 3f6q_A Integrin-linked protein 99.9 1E-24 3.5E-29 210.8 16.4 169 207-518 3-171 (179)
77 1awc_B Protein (GA binding pro 99.9 2.2E-24 7.6E-29 202.7 17.9 150 94-262 3-152 (153)
78 1ycs_B 53BP2, P53BP2; ankyrin 99.9 5.3E-26 1.8E-30 231.0 5.4 179 132-323 4-193 (239)
79 3twr_A Tankyrase-2; ankyrin re 99.9 5.6E-24 1.9E-28 202.6 14.7 159 91-267 5-164 (165)
80 1d9s_A Cyclin-dependent kinase 99.9 2.7E-24 9.2E-29 197.8 12.0 134 157-302 2-136 (136)
81 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.9E-23 1E-27 195.6 17.2 152 95-265 4-155 (156)
82 3t8k_A Uncharacterized protein 99.9 1.3E-24 4.6E-29 210.9 8.0 156 133-302 6-179 (186)
83 1bi7_B P16INK4A, MTS1, multipl 99.9 4E-24 1.4E-28 201.7 10.1 146 161-319 6-152 (156)
84 1bi7_B P16INK4A, MTS1, multipl 99.9 2.8E-23 9.7E-28 195.8 11.7 141 131-284 10-151 (156)
85 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4E-22 1.4E-26 180.1 14.9 126 166-302 1-126 (126)
86 1d9s_A Cyclin-dependent kinase 99.9 4.1E-22 1.4E-26 183.2 13.3 126 131-268 10-136 (136)
87 2jab_A H10-2-G3; HER2, darpin, 99.9 4.4E-22 1.5E-26 182.9 13.2 123 133-266 14-136 (136)
88 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1E-21 3.5E-26 177.3 15.3 126 132-268 1-126 (126)
89 3t8k_A Uncharacterized protein 99.9 1.1E-22 3.7E-27 197.4 9.2 156 97-270 10-181 (186)
90 2jab_A H10-2-G3; HER2, darpin, 99.9 5.6E-22 1.9E-26 182.3 13.5 125 165-300 12-136 (136)
91 3c5r_A BARD-1, BRCA1-associate 99.9 2.3E-22 7.9E-27 185.0 8.5 132 158-301 2-133 (137)
92 3deo_A Signal recognition part 99.9 6.1E-23 2.1E-27 199.2 4.7 114 205-322 40-154 (183)
93 3ui2_A Signal recognition part 99.9 6.8E-23 2.3E-27 208.6 4.7 139 167-321 15-154 (244)
94 3deo_A Signal recognition part 99.9 2.5E-21 8.6E-26 187.7 13.6 138 132-299 43-181 (183)
95 3ui2_A Signal recognition part 99.9 2.2E-21 7.4E-26 197.4 13.6 141 132-302 44-185 (244)
96 2b0o_E UPLC1; arfgap, structur 99.9 3.9E-21 1.3E-25 201.5 15.7 140 133-290 151-299 (301)
97 3c5r_A BARD-1, BRCA1-associate 99.8 1.5E-21 5E-26 179.6 7.1 128 129-267 6-133 (137)
98 3aaa_C Myotrophin, protein V-1 99.8 5.5E-21 1.9E-25 172.2 10.2 119 164-293 4-122 (123)
99 3ehr_A Osteoclast-stimulating 99.8 2.9E-21 9.8E-26 193.5 8.5 137 163-311 69-206 (222)
100 2b0o_E UPLC1; arfgap, structur 99.8 7.8E-21 2.7E-25 199.2 10.4 139 167-323 151-298 (301)
101 3aaa_C Myotrophin, protein V-1 99.8 1.7E-20 5.9E-25 169.0 8.9 112 132-254 6-117 (123)
102 1dcq_A PYK2-associated protein 99.8 3.4E-19 1.2E-23 184.6 17.8 126 133-269 130-264 (278)
103 3ehr_A Osteoclast-stimulating 99.8 1.8E-20 6.1E-25 187.7 7.8 129 132-271 72-201 (222)
104 3lvq_E ARF-GAP with SH3 domain 99.8 8E-19 2.7E-23 197.7 16.8 136 134-287 133-277 (497)
105 1dcq_A PYK2-associated protein 99.8 5.2E-19 1.8E-23 183.2 13.1 124 168-302 131-263 (278)
106 3jue_A Arfgap with coiled-coil 99.8 4.4E-19 1.5E-23 190.2 12.9 146 166-322 198-348 (368)
107 3jue_A Arfgap with coiled-coil 99.8 6.7E-19 2.3E-23 188.8 14.0 145 133-288 199-348 (368)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.8 8.1E-19 2.8E-23 149.3 11.0 91 167-267 2-92 (93)
109 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1E-18 3.6E-23 148.7 11.5 93 208-302 1-93 (93)
110 3lvq_E ARF-GAP with SH3 domain 99.8 7.7E-19 2.6E-23 197.8 12.7 136 168-321 133-277 (497)
111 2l6b_A NR1C; ankyrin, consensu 99.7 1.7E-18 5.8E-23 153.7 8.1 109 204-315 4-112 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.7 2.4E-18 8.2E-23 152.7 7.0 109 162-281 4-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.6 6E-16 2E-20 136.0 9.9 95 200-296 15-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.6 4.3E-16 1.5E-20 136.9 8.5 94 159-262 16-109 (110)
115 4dve_A Biotin transporter BIOY 47.3 1.2E+02 0.004 28.3 10.0 22 596-617 23-44 (198)
116 4ev6_A Magnesium transport pro 46.8 19 0.00065 37.0 5.1 22 679-700 281-302 (339)
117 2iub_A CORA, divalent cation t 43.0 18 0.00061 37.6 4.3 21 679-699 305-325 (363)
118 3mkq_B Coatomer subunit alpha; 24.3 3.2E+02 0.011 24.8 8.7 48 97-155 12-59 (177)
119 3gvo_A Pumilio 2, pumilio homo 24.2 1.2E+02 0.004 31.0 6.7 55 97-155 41-95 (351)
120 3rhw_A Avermectin-sensitive gl 22.1 3.8E+02 0.013 27.1 10.1 44 690-733 257-300 (347)
121 1gp8_A Protein (scaffolding pr 22.1 55 0.0019 21.3 2.1 19 451-469 16-34 (40)
122 3gvo_A Pumilio 2, pumilio homo 20.5 2E+02 0.0067 29.3 7.5 61 90-154 69-130 (351)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.1e-53 Score=474.20 Aligned_cols=381 Identities=15% Similarity=0.055 Sum_probs=317.4
Q ss_pred hhccccccCCCchhHHHHHhcCChHHHHHHHHhhHHHHhccCCCCCcccchhHH-HHHHHHhcCHHHHHHHHHHHHhccc
Q 004165 43 KDAQKNEYYGPYCLLYAMIESNDWQGVEDFVKQTKEAQSSKDAQGNEYYDLSWT-LCRMIEINDRQGAEDLVKEVKEAKS 121 (770)
Q Consensus 43 ~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~~~t-L~~A~~~g~~~~v~~Ll~~~~~~~~ 121 (770)
.+++..+..|.||||+|+..++ .+.+++|+++|++++..+..+.| ||+|+..|+.++++.|++.+.
T Consensus 5 ~~~~~~~~~g~t~L~~Aa~~g~---------~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~---- 71 (437)
T 1n11_A 5 ISGGGGGESGLTPLHVASFMGH---------LPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKA---- 71 (437)
T ss_dssp ----------CCHHHHHHHHTC---------HHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTC----
T ss_pred CCccccCCCCCCHHHHHHHCCC---------HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC----
Confidence 4567778899999999999999 99999999999999999988888 999999999999999997643
Q ss_pred cccccccccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhh
Q 004165 122 SEDAQRDEYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEA 201 (770)
Q Consensus 122 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~ 201 (770)
..+. .+..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+ |+. .|+ .+++++|++.+ ++
T Consensus 72 ~~~~---~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~~--~~ 138 (437)
T 1n11_A 72 KVNA---KAKDDQTPLHCAARIGHTNMVKLLLEN-NANPNLATTAGHTPLHI-AAR-----EGH-VETVLALLEKE--AS 138 (437)
T ss_dssp CSSC---CCTTSCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTCCCHHHH-HHH-----HTC-HHHHHHHHHTT--CC
T ss_pred CCCC---CCCCCCCHHHHHHHCCCHHHHHHHHhC-CCCCCCCCCCCCcHHHH-HHH-----cCC-HHHHHHHHhCC--CC
Confidence 2221 234599999999999999999977754 88999999999999999 999 999 99999999999 88
Q ss_pred hccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHH
Q 004165 202 LARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVL 281 (770)
Q Consensus 202 ~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 281 (770)
.+..+..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|+++|++++ ..+.+|.|||
T Consensus 139 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L 216 (437)
T 1n11_A 139 QACMTKKGFTPLHVAAKYGKVRVAELLLERDAH-PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPH-SPAWNGYTPL 216 (437)
T ss_dssp SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSC-CCCTTCCCHH
T ss_pred CcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-CcCCCCCCHH
Confidence 888999999999999999999999999999999 89999999999999999999999999999999888 5889999999
Q ss_pred HHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCcccc
Q 004165 282 ANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETVD 361 (770)
Q Consensus 282 h~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 361 (770)
|+|+..|+.+++++|++.+++++ ..+..|.||||+|+..++ ...++.+
T Consensus 217 ~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g~-------~~~v~~L------------------------ 264 (437)
T 1n11_A 217 HIAAKQNQVEVARSLLQYGGSAN-AESVQGVTPLHLAAQEGH-------AEMVALL------------------------ 264 (437)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTC-------HHHHHHH------------------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHCCC-------HHHHHHH------------------------
Confidence 99999999999999999999887 789999999999998873 1122222
Q ss_pred cccccccccccccCCCCCCCCCCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccCC
Q 004165 362 RDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTN 441 (770)
Q Consensus 362 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~ 441 (770)
.+.....+
T Consensus 265 ------------------------------------------------------------------------l~~~~~~~ 272 (437)
T 1n11_A 265 ------------------------------------------------------------------------LSKQANGN 272 (437)
T ss_dssp ------------------------------------------------------------------------HTTTCCTT
T ss_pred ------------------------------------------------------------------------HhcCCCCC
Confidence 11111111
Q ss_pred ccccCCcchHHHHHHHcCcHHHHHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcCcccccccccccCCCch
Q 004165 442 PENRDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVNFTTFLFSFRDFLGNNI 521 (770)
Q Consensus 442 ~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~~~~~~~n~~D~~G~T~ 521 (770)
.. ...|.||||.|+..|+.++++.|++.+.+ ++.+|..|+||||+|+.+|+.+++++|++.+ .++|.+|..|+||
T Consensus 273 ~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g---ad~n~~~~~g~t~ 347 (437)
T 1n11_A 273 LG-NKSGLTPLHLVAQEGHVPVADVLIKHGVM-VDATTRMGYTPLHVASHYGNIKLVKFLLQHQ---ADVNAKTKLGYSP 347 (437)
T ss_dssp CC-CTTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTT---CCTTCCCTTSCCH
T ss_pred CC-CCCCCCHHHHHHHcCCHHHHHHHHhCCcc-CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcC---CCCCCCCCCCCCH
Confidence 11 12678899999999999999999988776 7788889999999999999999999999887 8889999999999
Q ss_pred hhhhhccCCCCCccchHHhhHHHHHHHHHhhhcC-CCCchhhhhccCCChhHHhhHH
Q 004165 522 LHLAGRLVPSSEVAGAALQMQRELQWFKMVENLV-HPSDREAENKLRQTPREVFTQE 577 (770)
Q Consensus 522 LHlAa~~g~~~~v~~~~lq~~~~l~w~~~v~~l~-~~~~~~~~N~~G~Tp~dl~~~~ 577 (770)
||+|++.|+.+ .|+.++ .+.+.+.+|++|+||++++.+.
T Consensus 348 L~~A~~~g~~~-----------------iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 387 (437)
T 1n11_A 348 LHQAAQQGHTD-----------------IVTLLLKNGASPNEVSSDGTTPLAIAKRL 387 (437)
T ss_dssp HHHHHHTTCHH-----------------HHHHHHHTTCCSCCCCSSSCCHHHHHHHT
T ss_pred HHHHHHCChHH-----------------HHHHHHHCcCCCCCCCCCCCCHHHHHHHc
Confidence 99999988742 122222 3455778888999999987654
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.1e-51 Score=453.86 Aligned_cols=353 Identities=13% Similarity=0.044 Sum_probs=314.6
Q ss_pred hhhccccccCCCchhHHHHHhcCChHHHHHHHHhhHHHHhccCCCCCcccchhHH-HHHHHHhcCHHHHHHHHHHHHhcc
Q 004165 42 SKDAQKNEYYGPYCLLYAMIESNDWQGVEDFVKQTKEAQSSKDAQGNEYYDLSWT-LCRMIEINDRQGAEDLVKEVKEAK 120 (770)
Q Consensus 42 ~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~~~t-L~~A~~~g~~~~v~~Ll~~~~~~~ 120 (770)
..+++..|..|.||||+|+..++ .+.+++|+++|++++.++..|.| ||+|+..|+.++++.|++++.
T Consensus 37 g~~~~~~~~~~~t~L~~A~~~g~---------~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga--- 104 (437)
T 1n11_A 37 GASPNVSNVKVETPLHMAARAGH---------TEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNA--- 104 (437)
T ss_dssp TCCSCCSSSCCCCHHHHHHHHTC---------HHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTC---
T ss_pred CCCCCCCCCCCCCHHHHHHHcCC---------HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCC---
Confidence 35667788999999999999999 99999999999999999999988 999999999999999997643
Q ss_pred ccccccccccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChh
Q 004165 121 SSEDAQRDEYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPE 200 (770)
Q Consensus 121 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~ 200 (770)
..+. .+..|.||||+|+..|+.++++.|+. .+.+.+..+..|.||||+ |+. .|+ .+++++|++.| +
T Consensus 105 -~~~~---~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~g--~ 170 (437)
T 1n11_A 105 -NPNL---ATTAGHTPLHIAAREGHVETVLALLE-KEASQACMTKKGFTPLHV-AAK-----YGK-VRVAELLLERD--A 170 (437)
T ss_dssp -CTTC---CCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCCTTSCCHHHH-HHH-----TTC-HHHHHHHHHTT--C
T ss_pred -CCCC---CCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCCcCCCCCCCCHHHH-HHH-----cCC-HHHHHHHHhCC--C
Confidence 1111 23459999999999999999998875 577788888999999999 999 999 99999999999 9
Q ss_pred hhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchH
Q 004165 201 ALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALV 280 (770)
Q Consensus 201 ~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 280 (770)
+++..+..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++.|++++ ..+..|.||
T Consensus 171 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~ 248 (437)
T 1n11_A 171 HPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS-PHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSAN-AESVQGVTP 248 (437)
T ss_dssp CTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCC-SCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCH
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCH
Confidence 9999999999999999999999999999999999 89999999999999999999999999999999988 589999999
Q ss_pred HHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCccc
Q 004165 281 LANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETV 360 (770)
Q Consensus 281 Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 360 (770)
||+|+..|+.+++++|++++++.+ ..|..|.||||+|+..++
T Consensus 249 L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~g~t~L~~A~~~~~------------------------------------- 290 (437)
T 1n11_A 249 LHLAAQEGHAEMVALLLSKQANGN-LGNKSGLTPLHLVAQEGH------------------------------------- 290 (437)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCTT-CCCTTCCCHHHHHHHHTC-------------------------------------
T ss_pred HHHHHHCCCHHHHHHHHhcCCCCC-CCCCCCCCHHHHHHHcCC-------------------------------------
Confidence 999999999999999999999987 789999999999998762
Q ss_pred ccccccccccccccCCCCCCCCCCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccC
Q 004165 361 DRDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWT 440 (770)
Q Consensus 361 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~ 440 (770)
..++++|.... ...
T Consensus 291 ---------------------------------------------------------------~~~~~~Ll~~g---~~~ 304 (437)
T 1n11_A 291 ---------------------------------------------------------------VPVADVLIKHG---VMV 304 (437)
T ss_dssp ---------------------------------------------------------------HHHHHHHHHHT---CCT
T ss_pred ---------------------------------------------------------------HHHHHHHHhCC---ccC
Confidence 11222222222 222
Q ss_pred CccccCCcchHHHHHHHcCcHHHHHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcCcccccccccccCCCc
Q 004165 441 NPENRDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVNFTTFLFSFRDFLGNN 520 (770)
Q Consensus 441 ~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~~~~~~~n~~D~~G~T 520 (770)
+... ..|.||||.|+..|+.++|++|++.+.+ ++.+|..|+||||+|+++|+.+++++|++.| ++++.+|.+|+|
T Consensus 305 ~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad-~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g---a~~~~~~~~g~t 379 (437)
T 1n11_A 305 DATT-RMGYTPLHVASHYGNIKLVKFLLQHQAD-VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNG---ASPNEVSSDGTT 379 (437)
T ss_dssp TCCC-SSCCCHHHHHHHSSCSHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---CCSCCCCSSSCC
T ss_pred CCCC-CCCCCHHHHHHHcCcHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHCChHHHHHHHHHCc---CCCCCCCCCCCC
Confidence 2111 2689999999999999999999999887 7899999999999999999999999999998 899999999999
Q ss_pred hhhhhhccCCC
Q 004165 521 ILHLAGRLVPS 531 (770)
Q Consensus 521 ~LHlAa~~g~~ 531 (770)
|||+|++.|+.
T Consensus 380 ~l~~A~~~g~~ 390 (437)
T 1n11_A 380 PLAIAKRLGYI 390 (437)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHcCcH
Confidence 99999999984
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=5.8e-39 Score=344.65 Aligned_cols=280 Identities=17% Similarity=0.109 Sum_probs=238.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCC-CCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCC
Q 004165 132 GRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDG-HKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGR 210 (770)
Q Consensus 132 ~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~-g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~ 210 (770)
.|.|+||.|++.|+.++|+.||+ .|+++|.++.. |+||||+ |+. .|+ .++|++|+++| ++++.++..+.
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL~-~Gadvn~~~~~~g~TpLh~-A~~-----~g~-~~iv~~Ll~~g--a~~~~~~~~~~ 93 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLLE-GGANVNFQEEEGGWTPLHN-AVQ-----MSR-EDIVELLLRHG--ADPVLRKKNGA 93 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHH-HTCCTTCCCTTTCCCHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCTTCC
T ss_pred CCChHHHHHHHcCCHHHHHHHHH-CCCCCCccCCCCCcCHHHH-HHH-----cCC-HHHHHHHHHcC--CchhhhccCCC
Confidence 37899999999999999998885 58999988765 7999999 999 999 99999999999 99999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCc---------ccCCCCchHH
Q 004165 211 TALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDI---------YSGNDGALVL 281 (770)
Q Consensus 211 T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~---------~~~~~g~t~L 281 (770)
+|++.++..+...++..+++.+++ ++..|..|.||||+|+..|+.+++++|+++|++++. ..+..|.|||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L 172 (337)
T 4g8k_A 94 TPFILAAIAGSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATAL 172 (337)
T ss_dssp CHHHHHHHHTCHHHHHHHHTTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHH
T ss_pred chhHHHHhcccchhhHHhhhccch-hhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHH
Confidence 999999999999999999999999 899999999999999999999999999999988775 2456799999
Q ss_pred HHHHHhchHHHHHHHHhh-CCCCcccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCccc
Q 004165 282 ANLIHARLYDVALDLLKL-HPTIGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETV 360 (770)
Q Consensus 282 h~A~~~~~~~iv~~Ll~~-~~~~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 360 (770)
|+|+..|+.+++++||++ |++++ .+|..|.||+|.++..+...
T Consensus 173 ~~A~~~g~~~~v~~LL~~~gad~n-~~d~~g~t~l~~~~~~~~~~----------------------------------- 216 (337)
T 4g8k_A 173 MDAAEKGHVEVLKILLDEMGADVN-ACDNMGRNALIHALLSSDDS----------------------------------- 216 (337)
T ss_dssp HHHHHHTCHHHHHHHHHHSCCCTT-CCCTTSCCHHHHHHHHSCTT-----------------------------------
T ss_pred HHHHHCCCHHHHHHHHhccCCCcC-ccCCCCCcHHHHHHHHcCcc-----------------------------------
Confidence 999999999999999975 77776 89999999999887654210
Q ss_pred ccccccccccccccCCCCCCCCCCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccC
Q 004165 361 DRDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWT 440 (770)
Q Consensus 361 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~ 440 (770)
....++++ +.+...+.
T Consensus 217 -------------------------------------------------------------~~~~i~~l---Ll~~gad~ 232 (337)
T 4g8k_A 217 -------------------------------------------------------------DVEAITHL---LLDHGADV 232 (337)
T ss_dssp -------------------------------------------------------------THHHHHHH---HHHTTCCT
T ss_pred -------------------------------------------------------------cHHHHHHH---HHHCCCCC
Confidence 00112222 22222222
Q ss_pred CccccCCcchHHHHHHHcCcHHHHHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcCcccccccccccCCCc
Q 004165 441 NPENRDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVNFTTFLFSFRDFLGNN 520 (770)
Q Consensus 441 ~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~~~~~~~n~~D~~G~T 520 (770)
+..+ ..|.||||.||..|+.++|+.|++.....++.+|.+|+||||+|+++|+.+++++|++.| +++|. .|
T Consensus 233 n~~d-~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G---Ad~n~-----~~ 303 (337)
T 4g8k_A 233 NVRG-ERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG---ASTDC-----GD 303 (337)
T ss_dssp TCCC-GGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTS---CSSTT-----CC
T ss_pred CCcC-CCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCC-----CC
Confidence 2221 268999999999999999999998766668999999999999999999999999999998 66654 46
Q ss_pred hhhhhhccCCC
Q 004165 521 ILHLAGRLVPS 531 (770)
Q Consensus 521 ~LHlAa~~g~~ 531 (770)
|||+|++.|+.
T Consensus 304 ~L~~A~~~~~~ 314 (337)
T 4g8k_A 304 LVMTARRNYDH 314 (337)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHcCCH
Confidence 99999999984
No 4
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=7.6e-39 Score=345.10 Aligned_cols=278 Identities=12% Similarity=0.059 Sum_probs=203.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcH
Q 004165 133 RYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTA 212 (770)
Q Consensus 133 g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~ 212 (770)
+.++||.||..|+.+.++.++...+.+++.+|..|.||||+ |+. .|+ .+++++|++.| ++++.+|..|.||
T Consensus 24 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~g--~~~~~~~~~g~t~ 94 (351)
T 3utm_A 24 KKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHL-AAG-----YNR-VRIVQLLLQHG--ADVHAKDKGGLVP 94 (351)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCTTCCCH
T ss_pred cchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHH-HHH-----cCC-HHHHHHHHHcC--CCCCccCCCCCcH
Confidence 45667777777777777666666666666666667777777 777 777 77777777776 6666677777777
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHH--------
Q 004165 213 LHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANL-------- 284 (770)
Q Consensus 213 Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A-------- 284 (770)
||+|+..|+.+++++|+++|++ ++..|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||+|+|
T Consensus 95 L~~A~~~g~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~~~l~~a~~~~~~~~ 172 (351)
T 3utm_A 95 LHNACSYGHYEVTELLLKHGAC-VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPT-LVNCHGKSAVDMAPTPELRER 172 (351)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHCSSHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-cccCCCCcchHHHhhhhhHHH
Confidence 7777777777777777777766 66667777777777777777777777777766666 3666666666654
Q ss_pred -------------HHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCC
Q 004165 285 -------------IHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPS 351 (770)
Q Consensus 285 -------------~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~ 351 (770)
+..++.+.++.++....... ..+..|.||||+|+..+..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~t~L~~A~~~~~~--------------------------- 224 (351)
T 3utm_A 173 LTYEFKGHSLLQAAREADLAKVKKTLALEIINF-KQPQSHETALHCAVASLHP--------------------------- 224 (351)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTC-CCTTTCCCHHHHHHHCCST---------------------------
T ss_pred HHhhhcccHHHHHHHhccHHHHHHHHHhhcccc-cCCCCCCCHHHHHHHHhCc---------------------------
Confidence 45566666666666654433 5778899999999987521
Q ss_pred CCCCCCcccccccccccccccccCCCCCCCCCCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHH
Q 004165 352 IQTNDDETVDRDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVR 431 (770)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~ 431 (770)
...++++
T Consensus 225 -------------------------------------------------------------------------~~~~~~~ 231 (351)
T 3utm_A 225 -------------------------------------------------------------------------KRKQVAE 231 (351)
T ss_dssp -------------------------------------------------------------------------THHHHHH
T ss_pred -------------------------------------------------------------------------cHHHHHH
Confidence 0112222
Q ss_pred HHhhccccCCccccCCcchHHHHHHHcCcHHHHHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcCcccccc
Q 004165 432 IICQGVIWTNPENRDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVNFTTFLF 511 (770)
Q Consensus 432 ~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~~~~~~~ 511 (770)
.+.+.....+..+ ..|.||||+|+..|+.++|+.|++.+.+ ++.+|..|+||||+|+.+|+.+++++|++.| +++
T Consensus 232 ~Ll~~g~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g---ad~ 306 (351)
T 3utm_A 232 LLLRKGANVNEKN-KDFMTPLHVAAERAHNDVMEVLHKHGAK-MNALDSLGQTALHRAALAGHLQTCRLLLSYG---SDP 306 (351)
T ss_dssp HHHHTTCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT---CCT
T ss_pred HHHHcCCCcCCcC-CCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC---CCC
Confidence 2333222222221 2689999999999999999999998877 8899999999999999999999999999998 899
Q ss_pred cccccCCCchhhhhhc
Q 004165 512 SFRDFLGNNILHLAGR 527 (770)
Q Consensus 512 n~~D~~G~T~LHlAa~ 527 (770)
+.+|..|+||||+|..
T Consensus 307 ~~~~~~g~tal~~a~~ 322 (351)
T 3utm_A 307 SIISLQGFTAAQMGNE 322 (351)
T ss_dssp TCCCTTSCCHHHHSCH
T ss_pred CCcCCCCCChhhhhhH
Confidence 9999999999999943
No 5
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.4e-38 Score=332.28 Aligned_cols=268 Identities=18% Similarity=0.138 Sum_probs=231.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCCcccccc-cCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCc
Q 004165 133 RYWPLYKMTQKNDWRGVEDFVGEHPDALTDK-IDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRT 211 (770)
Q Consensus 133 g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~-d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T 211 (770)
|.||||.|+..|+.+++++|++ .+.+++.. +..|.||||+ |+. .|+ .+++++|++.| ++++.+|..|.|
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~g--~~~~~~~~~g~t 74 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLE-GGANVNFQEEEGGWTPLHN-AVQ-----MSR-EDIVELLLRHG--ADPVLRKKNGAT 74 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTTCCCHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCTTCCC
T ss_pred cchHHHHHHHcCCHHHHHHHHH-cCCCcccccCCCCCcHHHH-HHH-----cCC-HHHHHHHHHcC--CCCcccCCCCCC
Confidence 7799999999999999998885 46778877 6778999999 999 999 99999999999 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCccc----------CCCCchHH
Q 004165 212 ALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYS----------GNDGALVL 281 (770)
Q Consensus 212 ~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~----------~~~g~t~L 281 (770)
|||+|+..|+.+++++|+++|++ ++..|..|.||||+|+..|+.+++++|++.|++++. . +..|.|||
T Consensus 75 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~~~~~~~~~g~t~L 152 (285)
T 1wdy_A 75 PFLLAAIAGSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNL-RRKTKEDQERLRKGGATAL 152 (285)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC-CCCCCHHHHHTTCCCCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC-CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCccc-ccccHHHHHhhccCCCcHH
Confidence 99999999999999999999999 899999999999999999999999999999988874 3 78899999
Q ss_pred HHHHHhchHHHHHHHHhh-CCCCcccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCccc
Q 004165 282 ANLIHARLYDVALDLLKL-HPTIGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETV 360 (770)
Q Consensus 282 h~A~~~~~~~iv~~Ll~~-~~~~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 360 (770)
|+|+..|+.+++++|++. +.++. ..|..|.||||+|+..+....
T Consensus 153 ~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~~g~t~l~~a~~~~~~~~---------------------------------- 197 (285)
T 1wdy_A 153 MDAAEKGHVEVLKILLDEMGADVN-ACDNMGRNALIHALLSSDDSD---------------------------------- 197 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTSCCCTT-CCCTTSCCHHHHHHHCSCTTT----------------------------------
T ss_pred HHHHHcCCHHHHHHHHHhcCCCCC-ccCCCCCCHHHHHHHccccch----------------------------------
Confidence 999999999999999998 77776 889999999999998873100
Q ss_pred ccccccccccccccCCCCCCCCCCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccC
Q 004165 361 DRDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWT 440 (770)
Q Consensus 361 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~ 440 (770)
..++++.+.+.....
T Consensus 198 -----------------------------------------------------------------~~~i~~~Ll~~g~~~ 212 (285)
T 1wdy_A 198 -----------------------------------------------------------------VEAITHLLLDHGADV 212 (285)
T ss_dssp -----------------------------------------------------------------HHHHHHHHHHTTCCS
T ss_pred -----------------------------------------------------------------HHHHHHHHHHcCCCC
Confidence 112222233322222
Q ss_pred CccccCCcchHHHHHHHcCcHHHHHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcCccccccccccc
Q 004165 441 NPENRDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVNFTTFLFSFRDF 516 (770)
Q Consensus 441 ~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~~~~~~~n~~D~ 516 (770)
+..+ ..|.||||+|+..|+.++|+.|++.....++.+|..|+||||+|+++|+.+++++|++.| ++++.+|.
T Consensus 213 ~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~G---a~~~~~d~ 284 (285)
T 1wdy_A 213 NVRG-ERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG---ASTDCGDL 284 (285)
T ss_dssp SCCC-TTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS---SCSCCSSC
T ss_pred CCcC-CCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcC---CCCCcccc
Confidence 2211 268999999999999999999999555558899999999999999999999999999998 88888773
No 6
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=3.5e-38 Score=338.60 Aligned_cols=239 Identities=18% Similarity=0.138 Sum_probs=202.3
Q ss_pred ccCCCchhHHHHHhcCChHHHHHHHHhhHHHHhccCCCCCcccch-hHH-HHHHHHhcCHHHHHHHHHHHHhcccccccc
Q 004165 49 EYYGPYCLLYAMIESNDWQGVEDFVKQTKEAQSSKDAQGNEYYDL-SWT-LCRMIEINDRQGAEDLVKEVKEAKSSEDAQ 126 (770)
Q Consensus 49 d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~-~~t-L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~ 126 (770)
+..|.|+||.|+..++ .+.+++|+++|+|+|.++.. |+| ||+|+..|+.++++.|++++. ..+
T Consensus 22 ~~~~~t~L~~Av~~g~---------~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga----~~~-- 86 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNED---------VDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA----DPV-- 86 (337)
T ss_dssp HHHHHHHHHHHHHTTC---------HHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTT--
T ss_pred CCCCChHHHHHHHcCC---------HHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCC----chh--
Confidence 3457899999999999 99999999999999988764 777 999999999999999996543 111
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhcc--
Q 004165 127 RDEYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALAR-- 204 (770)
Q Consensus 127 ~~~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~-- 204 (770)
..+..+.++++.++..+..+.+..++ ..+.+++.+|..|.||||+ |+. .|+ .+++++|++.| ++++.
T Consensus 87 -~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~g~t~l~~-A~~-----~~~-~~~~~~ll~~g--a~~~~~~ 155 (337)
T 4g8k_A 87 -LRKKNGATPFILAAIAGSVKLLKLFL-SKGADVNECDFYGFTAFME-AAV-----YGK-VKALKFLYKRG--ANVNLRR 155 (337)
T ss_dssp -CCCTTCCCHHHHHHHHTCHHHHHHHH-TTTCCTTCBCTTCCBHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCC
T ss_pred -hhccCCCchhHHHHhcccchhhHHhh-hccchhhhhccCCCCHHHH-HHH-----cCc-HHHHHHHHHcC--CCcchhh
Confidence 12344899999999999999999555 6688999999999999999 999 999 99999999999 66554
Q ss_pred --------ccCCCCcHHHHHHHcCCHHHHHHHHh-cCCCCccCCCCCCCcHHHHHHHcCC----hhHHHHHHhhcCCCCc
Q 004165 205 --------QNRHGRTALHFCAAKGNLKAIKVLMK-YKPDLTNVRDNEGTLPVQLAALYGH----KDTFQYLLKETHGVDI 271 (770)
Q Consensus 205 --------~d~~g~T~Lh~A~~~g~~~iv~~Ll~-~~~~l~~~~d~~g~tpL~~A~~~g~----~~~v~~Ll~~~~~~~~ 271 (770)
.+..|.||||+|+..|+.++|++|++ .|++ ++.+|..|.||+|.++..++ .+++++|+++|++++
T Consensus 156 ~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad-~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n- 233 (337)
T 4g8k_A 156 KTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD-VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN- 233 (337)
T ss_dssp CCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCC-TTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTT-
T ss_pred ccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCC-cCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCC-
Confidence 34568999999999999999999996 4888 89999999999998887655 358899999999999
Q ss_pred ccCCCCchHHHHHHHhchHHHHHHHHhh-CCCCcccCCCCCCCHHH
Q 004165 272 YSGNDGALVLANLIHARLYDVALDLLKL-HPTIGRDNIDSRRIVLK 316 (770)
Q Consensus 272 ~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~-~~~~~~~~d~~g~tpL~ 316 (770)
.++.+|+||||+|+..|+.++++.|++. +.+++ .+|.+|+||||
T Consensus 234 ~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn-~~d~~G~TpL~ 278 (337)
T 4g8k_A 234 VRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN-DTDSDGKTALL 278 (337)
T ss_dssp CCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTT-CBCTTSCBHHH
T ss_pred CcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCccc-CcCCCCCCHHH
Confidence 5999999999999999999999999986 44544 55554444444
No 7
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.2e-38 Score=328.67 Aligned_cols=244 Identities=15% Similarity=0.087 Sum_probs=195.8
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHhhC----------CcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCCh
Q 004165 130 YYGRYWPLYKMTQKNDWRGVEDFVGEH----------PDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVP 199 (770)
Q Consensus 130 ~~~g~t~L~~A~~~g~~~~v~~LL~~~----------~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~ 199 (770)
...|.|+||+|+..|+.+.+..++... ...++..|..|+||||+ |+. .|+ .+++++|++.|
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~-Aa~-----~g~-~~~v~~Ll~~g-- 82 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHE-AAI-----HGH-QLSLRNLISQG-- 82 (285)
T ss_dssp ------------------------------CCSEECCCCTTCSSSCCSCCHHHH-HHH-----TTC-HHHHHHHHHTT--
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHH-HHH-----cCC-HHHHHHHHHCC--
Confidence 345899999999999987777665442 23467788899999999 999 999 99999999999
Q ss_pred hhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCch
Q 004165 200 EALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGAL 279 (770)
Q Consensus 200 ~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t 279 (770)
++++.+|..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|++.|++.+ .+.+|.|
T Consensus 83 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t 159 (285)
T 3d9h_A 83 WAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLAS 159 (285)
T ss_dssp CCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTSC
T ss_pred CCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC--CCCCCCC
Confidence 99999999999999999999999999999999999 89999999999999999999999999999998887 4566999
Q ss_pred HHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCcc
Q 004165 280 VLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDET 359 (770)
Q Consensus 280 ~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 359 (770)
|||+|+..|+.+++++|+++++++. .+|.+
T Consensus 160 ~L~~A~~~g~~~~v~~Ll~~g~~~~-~~d~~------------------------------------------------- 189 (285)
T 3d9h_A 160 PIHEAARRGHVECVNSLIAYGGNID-HKISH------------------------------------------------- 189 (285)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTT-CCBTT-------------------------------------------------
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCC-CcCCC-------------------------------------------------
Confidence 9999999999999999999998775 44444
Q ss_pred cccccccccccccccCCCCCCCCCCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhcccc
Q 004165 360 VDRDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIW 439 (770)
Q Consensus 360 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~ 439 (770)
T Consensus 190 -------------------------------------------------------------------------------- 189 (285)
T 3d9h_A 190 -------------------------------------------------------------------------------- 189 (285)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccCCcchHHHHHHHcCcHHHHHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcCcccccccccccCCC
Q 004165 440 TNPENRDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVNFTTFLFSFRDFLGN 519 (770)
Q Consensus 440 ~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~~~~~~~n~~D~~G~ 519 (770)
|.||||+|+..|+.++|+.|++.+.+ ++ .|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|+
T Consensus 190 --------g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---ad~~~~d~~g~ 256 (285)
T 3d9h_A 190 --------LGTPLYLACENQQRACVKKLLESGAD-VN-QGKGQDSPLHAVVRTASEELACLLMDFG---ADTQAKNAEGK 256 (285)
T ss_dssp --------TBCHHHHHHHTTCHHHHHHHHHTTCC-TT-CCBTTBCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSC
T ss_pred --------CCCHHHHHHHcCcHHHHHHHHHCCCC-CC-CCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCCCCcCCCCC
Confidence 44566667777889999999999877 44 4889999999999999999999999988 89999999999
Q ss_pred chhhhhhcc
Q 004165 520 NILHLAGRL 528 (770)
Q Consensus 520 T~LHlAa~~ 528 (770)
||||+|+..
T Consensus 257 t~l~~A~~~ 265 (285)
T 3d9h_A 257 RPVELVPPE 265 (285)
T ss_dssp CGGGGSCTT
T ss_pred CHHHHhcCc
Confidence 999999954
No 8
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.9e-37 Score=334.22 Aligned_cols=330 Identities=15% Similarity=0.025 Sum_probs=218.1
Q ss_pred ccccccCCCchhHHHHHhcCChHHHHHHHHhhHHHHhc-cCCCCCcccchhHH-HHHHHHhcCHHHHHHHHHHHHhcccc
Q 004165 45 AQKNEYYGPYCLLYAMIESNDWQGVEDFVKQTKEAQSS-KDAQGNEYYDLSWT-LCRMIEINDRQGAEDLVKEVKEAKSS 122 (770)
Q Consensus 45 ~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t-L~~A~~~g~~~~v~~Ll~~~~~~~~~ 122 (770)
....+.+|.|+||.|+..++ .+.++.++. .+++++..|..|.| ||+|+..|+.++++.|++.+. .
T Consensus 17 ~~~~~~~~~~~L~~A~~~g~---------~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~----~ 83 (351)
T 3utm_A 17 AVLTGEYKKDELLEAARSGN---------EEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGA----D 83 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHTC---------HHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTC----C
T ss_pred eeeeccccchhHHHHHHcCC---------HHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----C
Confidence 34456778999999999999 776665555 48999999999988 999999999999999996542 1
Q ss_pred ccccccccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhh
Q 004165 123 EDAQRDEYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEAL 202 (770)
Q Consensus 123 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~ 202 (770)
.+. .+..|.||||+|+..|+.+++++|+ +.+.+++..|..|.||||+ |+. .|+ .+++++|+++| +++
T Consensus 84 ~~~---~~~~g~t~L~~A~~~g~~~iv~~Ll-~~g~~~~~~~~~g~t~L~~-A~~-----~~~-~~~v~~Ll~~g--~~~ 150 (351)
T 3utm_A 84 VHA---KDKGGLVPLHNACSYGHYEVTELLL-KHGACVNAMDLWQFTPLHE-AAS-----KNR-VEVCSLLLSHG--ADP 150 (351)
T ss_dssp TTC---CCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHH-HHH-----TTC-HHHHHHHHHTT--CCT
T ss_pred CCc---cCCCCCcHHHHHHHCCCHHHHHHHH-HCCCCCCCCCCCCCCHHHH-HHH-----cCC-HHHHHHHHHcC--CCC
Confidence 111 2345999999999999999999777 4589999999999999999 999 999 99999999999 999
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHH
Q 004165 203 ARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLA 282 (770)
Q Consensus 203 ~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh 282 (770)
+..+..|.||+|.|+..+..+.+++... .++++.++..+..+.++.++....... ..+..|.||||
T Consensus 151 ~~~~~~g~~~l~~a~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~t~L~ 216 (351)
T 3utm_A 151 TLVNCHGKSAVDMAPTPELRERLTYEFK-------------GHSLLQAAREADLAKVKKTLALEIINF-KQPQSHETALH 216 (351)
T ss_dssp TCCCTTSCCHHHHCSSHHHHHHHHHHHH-------------HHHHHHHHHTTCHHHHHHHTTTCCTTC-CCTTTCCCHHH
T ss_pred ccccCCCCcchHHHhhhhhHHHHHhhhc-------------ccHHHHHHHhccHHHHHHHHHhhcccc-cCCCCCCCHHH
Confidence 9999999999988765555555444332 134444455555555555444432222 24444555555
Q ss_pred HHHHh---chHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCcc
Q 004165 283 NLIHA---RLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDET 359 (770)
Q Consensus 283 ~A~~~---~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 359 (770)
+|+.. +..+++++|++.+++++ .+|.+|.||||+|+..++. .
T Consensus 217 ~A~~~~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g~~-------~--------------------------- 261 (351)
T 3utm_A 217 CAVASLHPKRKQVAELLLRKGANVN-EKNKDFMTPLHVAAERAHN-------D--------------------------- 261 (351)
T ss_dssp HHHHCCSTTHHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCH-------H---------------------------
T ss_pred HHHHHhCccHHHHHHHHHHcCCCcC-CcCCCCCCHHHHHHHcCCH-------H---------------------------
Confidence 55554 33455555555555544 4455555555555544410 0
Q ss_pred cccccccccccccccCCCCCCCCCCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhcccc
Q 004165 360 VDRDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIW 439 (770)
Q Consensus 360 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~ 439 (770)
++++|. +....
T Consensus 262 ------------------------------------------------------------------~v~~Ll---~~ga~ 272 (351)
T 3utm_A 262 ------------------------------------------------------------------VMEVLH---KHGAK 272 (351)
T ss_dssp ------------------------------------------------------------------HHHHHH---HTTCC
T ss_pred ------------------------------------------------------------------HHHHHH---HCCCC
Confidence 111111 11111
Q ss_pred CCccccCCcchHHHHHHHcCcHHHHHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcCcccccccccccCCC
Q 004165 440 TNPENRDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVNFTTFLFSFRDFLGN 519 (770)
Q Consensus 440 ~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~~~~~~~n~~D~~G~ 519 (770)
.+..+ ..|.||||+|+..|+.++|++|++.+.+ ++.+|..|+||+|+| +.+++++|.+.. .....++.
T Consensus 273 ~n~~d-~~g~t~L~~A~~~~~~~~v~~Ll~~gad-~~~~~~~g~tal~~a----~~~~~~~l~~~~------~~~~~~~~ 340 (351)
T 3utm_A 273 MNALD-SLGQTALHRAALAGHLQTCRLLLSYGSD-PSIISLQGFTAAQMG----NEAVQQILSEST------PMRTSDVD 340 (351)
T ss_dssp TTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHS----CHHHHHHHHHC---------------
T ss_pred CCCcC-CCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCChhhhh----hHHHHHHHHhcc------ccccCcce
Confidence 11110 1567778888888999999999999887 789999999999998 567888888765 34567889
Q ss_pred chhhhhhccCC
Q 004165 520 NILHLAGRLVP 530 (770)
Q Consensus 520 T~LHlAa~~g~ 530 (770)
++|..|++.|+
T Consensus 341 ~~l~~A~~~gd 351 (351)
T 3utm_A 341 YRLLEASKAGD 351 (351)
T ss_dssp -----------
T ss_pred eehhhhhccCC
Confidence 99999999874
No 9
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=322.11 Aligned_cols=245 Identities=13% Similarity=0.099 Sum_probs=215.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCc
Q 004165 132 GRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRT 211 (770)
Q Consensus 132 ~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T 211 (770)
+|+||||+|+..|+.++++.|++ .+.+++.+|..|.||||+ |+. .|+ .+++++|++.| ++++.+|..|.|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~g--~~~~~~~~~g~t 71 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLIS-QGWAVNIITADHVSPLHE-ACL-----GGH-LSCVKILLKHG--AQVNGVTADWHT 71 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHH-TTCCSSCCCTTCCCHHHH-HHH-----HTC-HHHHHHHHHTT--CCTTCCCTTSCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHH-HHH-----cCC-HHHHHHHHHCC--CCCCCCCCCCCC
Confidence 48899999999999999998775 578999999999999999 999 999 99999999999 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHH
Q 004165 212 ALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYD 291 (770)
Q Consensus 212 ~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~ 291 (770)
|||+|+..|+.+++++|++.|++ ++. +.+|.||||+|+..|+.+++++|++.|++++ ..+.+|.||||+|+..|+.+
T Consensus 72 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~ 148 (261)
T 2xai_A 72 PLFNACVSGSWDCVNLLLQHGAS-VQP-ESDLASPIHEAARRGHVECVNSLIAYGGNID-HKISHLGTPLYLACENQQRA 148 (261)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC-SSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBTTTBCHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCC-CCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-cCCCCCCCHHHHHHHhCCHH
Confidence 99999999999999999999998 554 4569999999999999999999999999988 59999999999999999999
Q ss_pred HHHHHHhhCCCCcccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCcccccccccccccc
Q 004165 292 VALDLLKLHPTIGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDVENLTVTS 371 (770)
Q Consensus 292 iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (770)
++++|+++|++++ .|.
T Consensus 149 ~v~~Ll~~g~~~~--~~~-------------------------------------------------------------- 164 (261)
T 2xai_A 149 CVKKLLESGADVN--QGK-------------------------------------------------------------- 164 (261)
T ss_dssp HHHHHHHHTCCTT--CCB--------------------------------------------------------------
T ss_pred HHHHHHHcCCCCC--CCC--------------------------------------------------------------
Confidence 9999999988765 133
Q ss_pred cccCCCCCCCCCCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccccCCcchH
Q 004165 372 KIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPENRDRLLGA 451 (770)
Q Consensus 372 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~tp 451 (770)
.|.||
T Consensus 165 ---------------------------------------------------------------------------~g~t~ 169 (261)
T 2xai_A 165 ---------------------------------------------------------------------------GQDSP 169 (261)
T ss_dssp ---------------------------------------------------------------------------TTBCH
T ss_pred ---------------------------------------------------------------------------CCCCh
Confidence 35567
Q ss_pred HHHHHHcCcHHHHHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcCc-----ccccccccccCCCchhhhhh
Q 004165 452 MFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVNF-----TTFLFSFRDFLGNNILHLAG 526 (770)
Q Consensus 452 Lh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~~-----~~~~~n~~D~~G~T~LHlAa 526 (770)
||.|+..|+.++|+.|++.+.+ ++.+|.+|+||||+|+.++ +++++|++.+. ..+.++.+|..|+||||+|+
T Consensus 170 Lh~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~ 246 (261)
T 2xai_A 170 LHAVARTASEELACLLMDFGAD-TQAKNAEGKRPVELVPPES--PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKIT 246 (261)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGG
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCChhhhccccc--cHHHHHHhccCCccHHHHHHHHHHHHhchhccccCc
Confidence 7777788889999999999887 7899999999999999665 58999998761 12567899999999999999
Q ss_pred ccCCC
Q 004165 527 RLVPS 531 (770)
Q Consensus 527 ~~g~~ 531 (770)
+...+
T Consensus 247 ~~~~p 251 (261)
T 2xai_A 247 KLVLP 251 (261)
T ss_dssp GSSSC
T ss_pred ccCCc
Confidence 98765
No 10
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=4e-38 Score=342.77 Aligned_cols=308 Identities=12% Similarity=0.030 Sum_probs=219.6
Q ss_pred CCchhHHHHHhcCChHHHHHHHHhhHHHHhccCCCCCcccchhHHHHHHHHhcCHHHHHHHHHHHHhccccccccccccC
Q 004165 52 GPYCLLYAMIESNDWQGVEDFVKQTKEAQSSKDAQGNEYYDLSWTLCRMIEINDRQGAEDLVKEVKEAKSSEDAQRDEYY 131 (770)
Q Consensus 52 g~t~Lh~A~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~~~tL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 131 (770)
.+-+|+-++..++ .+.+..+.++...+..+ ...+.-+...|+.+.+..++.. ..+.
T Consensus 37 ~~~~l~~~~~~~~---------~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~------------~~~~ 92 (373)
T 2fo1_E 37 SQHSLLEASYDGY---------IKRQRNELQHYSLYPNP---QGYGNGNDFLGDFNHTNLQIPT------------EPEP 92 (373)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccCCcc---------ccchhhhhhhhccccCc---cccCCCCCcccccccccccccc------------CCCC
Confidence 4556777776666 55555555554444311 1114556667777777766521 1234
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCccccccc-CCCCCHHHHHHhccccccCCchHHHHHHHH--------HcCChhhh
Q 004165 132 GRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKI-DGHKTIFHLIAMLLVDVESDEGTCLVDNLA--------SIVVPEAL 202 (770)
Q Consensus 132 ~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d-~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll--------~~~~~~~~ 202 (770)
.|.||||.|+..|+ ++++.|+ ..+++.+| ..|+||||+ |+. .|+ .+++++|+ +.| +++
T Consensus 93 ~g~t~L~~Aa~~~~-~~~~~L~---~~~~n~~d~~~g~t~Lh~-Aa~-----~g~-~~~v~~Ll~~~~~~ll~~g--a~v 159 (373)
T 2fo1_E 93 ESPIKLHTEAAGSY-AITEPIT---RESVNIIDPRHNRTVLHW-IAS-----NSS-AEKSEDLIVHEAKECIAAG--ADV 159 (373)
T ss_dssp -CCCHHHHHHHSSS-CCCSCCS---TTTTTTCCCSSCCCHHHH-HHC-----TTC-CSCCTTHHHHHHHHHHHTC--CCT
T ss_pred CCccHHHHHhcCCc-hHHHHhc---cccccccCCcCCCCHHHH-HHH-----CCC-HHHHHHHHHHHHHHHHhcC--CCC
Confidence 58999999999665 7777554 25788888 688999999 999 999 88877776 788 999
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhc---CCCCcccCCCCch
Q 004165 203 ARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKET---HGVDIYSGNDGAL 279 (770)
Q Consensus 203 ~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~---~~~~~~~~~~g~t 279 (770)
+.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.+ .+++ ..+.+|.|
T Consensus 160 n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~d~~g~t 237 (373)
T 2fo1_E 160 NAMDCDENTPLMLAVLARRRRLVAYLMKAGAD-PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIE-ELDRNGMT 237 (373)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTS-CCCTTSCC
T ss_pred cCCCCCCCCHHHHHHHcChHHHHHHHHHCCCC-CcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChh-hcCCCCCC
Confidence 99999999999999999999999999999999 8999999999999999999999999999987 6777 58999999
Q ss_pred HHHHHHHhc---hHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCC
Q 004165 280 VLANLIHAR---LYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTND 356 (770)
Q Consensus 280 ~Lh~A~~~~---~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 356 (770)
|||+|+..+ +.+++++|+++++++.. .+.. ...
T Consensus 238 ~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~-~~~~---------~~~---------------------------------- 273 (373)
T 2fo1_E 238 ALMIVAHNEGRDQVASAKLLVEKGAKVDY-DGAA---------RKD---------------------------------- 273 (373)
T ss_dssp HHHHHHHSCSTTHHHHHHHHHHHTCCSSC-CSGG---------GTS----------------------------------
T ss_pred HHHHHHHhCCcchHHHHHHHHHCCCCccc-cccc---------ccC----------------------------------
Confidence 999999998 89999999999988762 1100 000
Q ss_pred CcccccccccccccccccCCCCCCCCCCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhc
Q 004165 357 DETVDRDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQG 436 (770)
Q Consensus 357 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~ 436 (770)
T Consensus 274 -------------------------------------------------------------------------------- 273 (373)
T 2fo1_E 274 -------------------------------------------------------------------------------- 273 (373)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCccccCCcchHHHHHHHcCcHHHHHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcCccccccccccc
Q 004165 437 VIWTNPENRDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVNFTTFLFSFRDF 516 (770)
Q Consensus 437 ~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~~~~~~~n~~D~ 516 (770)
.....|.||||+||..|+.++|++|++.++..++.+|..|+||||+|+.+|+.+++++|++.| +++|.+|.
T Consensus 274 ------~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g---ad~~~~d~ 344 (373)
T 2fo1_E 274 ------SEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQG---ASVEAVDA 344 (373)
T ss_dssp ------SSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT---CCSSCCCS
T ss_pred ------cccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCccCCCC
Confidence 000157889999999999999999999886668899999999999999999999999999988 88999999
Q ss_pred CCCchhhhhhccCCC
Q 004165 517 LGNNILHLAGRLVPS 531 (770)
Q Consensus 517 ~G~T~LHlAa~~g~~ 531 (770)
.|+||||+|+..|+.
T Consensus 345 ~g~t~l~~A~~~g~~ 359 (373)
T 2fo1_E 345 TDHTARQLAQANNHH 359 (373)
T ss_dssp SSCCHHHHHHHTTCH
T ss_pred CCCCHHHHHHHcCCH
Confidence 999999999999984
No 11
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=4.7e-37 Score=317.18 Aligned_cols=242 Identities=16% Similarity=0.129 Sum_probs=207.0
Q ss_pred CCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCc
Q 004165 166 GHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTL 245 (770)
Q Consensus 166 ~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~t 245 (770)
+|+||||+ |+. .|+ .+++++|++.| ++++.+|..|.||||+|+..|+.+++++|++.|++ ++.+|..|.|
T Consensus 2 ~g~t~L~~-A~~-----~g~-~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t 71 (261)
T 2xai_A 2 SDWSPMHE-AAI-----HGH-QLSLRNLISQG--WAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHT 71 (261)
T ss_dssp --CCHHHH-HHH-----HTC-HHHHHHHHHTT--CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred CCCCHHHH-HHH-----cCC-HHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCC
Confidence 57899999 999 999 99999999999 89999999999999999999999999999999999 8999999999
Q ss_pred HHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCCCcc
Q 004165 246 PVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKPYAF 325 (770)
Q Consensus 246 pL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~~~~ 325 (770)
|||+|+..|+.+++++|+++|++.+ .+.+|.||||+|+..|+.+++++|++++++++ .+|.+
T Consensus 72 ~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~--------------- 133 (261)
T 2xai_A 72 PLFNACVSGSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGHVECVNSLIAYGGNID-HKISH--------------- 133 (261)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBTT---------------
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-cCCCC---------------
Confidence 9999999999999999999998887 46679999999999999999999999998776 34443
Q ss_pred cCCCcchhhhHHHhhccccccccCCCCCCCCCcccccccccccccccccCCCCCCCCCCcccccccchhhhHhHHHHHHH
Q 004165 326 ASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNV 405 (770)
Q Consensus 326 ~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (770)
T Consensus 134 -------------------------------------------------------------------------------- 133 (261)
T 2xai_A 134 -------------------------------------------------------------------------------- 133 (261)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccccCCcchHHHHHHHcCcHHHHHHHHHhCCccccccccCCchH
Q 004165 406 LMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPENRDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRI 485 (770)
Q Consensus 406 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~ 485 (770)
|.||||.|+..|+.++|+.|++.+++ ++ .|..|+||
T Consensus 134 ------------------------------------------g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~-~~~~g~t~ 169 (261)
T 2xai_A 134 ------------------------------------------LGTPLYLACENQQRACVKKLLESGAD-VN-QGKGQDSP 169 (261)
T ss_dssp ------------------------------------------TBCHHHHHHHTTCHHHHHHHHHHTCC-TT-CCBTTBCH
T ss_pred ------------------------------------------CCCHHHHHHHhCCHHHHHHHHHcCCC-CC-CCCCCCCh
Confidence 44566677777889999999999888 44 48899999
Q ss_pred HHHHHhcChhHHHHHHhhcCcccccccccccCCCchhhhhhccCCCCCccchHHhhHHHHHHHHHhhhcCCC-----Cch
Q 004165 486 FDLAVLHRREKVFNLIHGVNFTTFLFSFRDFLGNNILHLAGRLVPSSEVAGAALQMQRELQWFKMVENLVHP-----SDR 560 (770)
Q Consensus 486 LH~Av~~g~~~iv~~Ll~~~~~~~~~n~~D~~G~T~LHlAa~~g~~~~v~~~~lq~~~~l~w~~~v~~l~~~-----~~~ 560 (770)
||+|+..|+.+++++|++.| ++++.+|.+|+||||+|+..++. .++ + ++..-++ ...
T Consensus 170 Lh~A~~~~~~~~v~~Ll~~g---ad~~~~d~~g~tpl~~A~~~~~~-------~~~---l-----l~~~~~~~l~~~~~~ 231 (261)
T 2xai_A 170 LHAVARTASEELACLLMDFG---ADTQAKNAEGKRPVELVPPESPL-------AQL---F-----LEREGPPSLMQLCRL 231 (261)
T ss_dssp HHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCGGGGSCTTCTH-------HHH---H-----HHC-CCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcC---CCCCCcCCCCCChhhhccccccH-------HHH---H-----HhccCCccHHHHHHH
Confidence 99999999999999999998 89999999999999999976642 100 0 0111111 236
Q ss_pred hhhhccCCChhHHhhHH
Q 004165 561 EAENKLRQTPREVFTQE 577 (770)
Q Consensus 561 ~~~N~~G~Tp~dl~~~~ 577 (770)
.++|..|+||++++.+.
T Consensus 232 ~~r~~~g~t~l~~~~~~ 248 (261)
T 2xai_A 232 RIRKCFGIQQHHKITKL 248 (261)
T ss_dssp HHHTTSCTTCGGGGGGS
T ss_pred HHHHHhchhccccCccc
Confidence 78899999999987653
No 12
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.9e-36 Score=313.65 Aligned_cols=241 Identities=18% Similarity=0.132 Sum_probs=211.8
Q ss_pred cCCCchhHHHHHhcCChHHHHHHHHhhHHHHhccCCCCCcc-cchhHH-HHHHHHhcCHHHHHHHHHHHHhccccccccc
Q 004165 50 YYGPYCLLYAMIESNDWQGVEDFVKQTKEAQSSKDAQGNEY-YDLSWT-LCRMIEINDRQGAEDLVKEVKEAKSSEDAQR 127 (770)
Q Consensus 50 ~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~-~~~~~t-L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 127 (770)
..|.||||+|+..++ .+.+++|+++|++++.. +..|+| ||+|+..|+.++++.|++.+. ..+
T Consensus 3 ~~g~~~L~~A~~~g~---------~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~----~~~--- 66 (285)
T 1wdy_A 3 VEDNHLLIKAVQNED---------VDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA----DPV--- 66 (285)
T ss_dssp HHHHHHHHHHHHTTC---------HHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTT---
T ss_pred cccchHHHHHHHcCC---------HHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC----CCc---
Confidence 358899999999999 99999999999999988 667777 999999999999999996542 111
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccc--
Q 004165 128 DEYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQ-- 205 (770)
Q Consensus 128 ~~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~-- 205 (770)
..+..|.||||+|+..|+.++++.|+ +.+.+++.+|..|.||||+ |+. .|+ .+++++|++.| ++++..
T Consensus 67 ~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~-A~~-----~~~-~~~~~~Ll~~g--~~~~~~~~ 136 (285)
T 1wdy_A 67 LRKKNGATPFLLAAIAGSVKLLKLFL-SKGADVNECDFYGFTAFME-AAV-----YGK-VKALKFLYKRG--ANVNLRRK 136 (285)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCTTCBCTTCCBHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCcccCCHHHH-HHH-----hCC-HHHHHHHHHhC--CCcccccc
Confidence 12345999999999999999999777 4688999999999999999 999 999 99999999999 777776
Q ss_pred --------cCCCCcHHHHHHHcCCHHHHHHHHhc-CCCCccCCCCCCCcHHHHHHHcCC----hhHHHHHHhhcCCCCcc
Q 004165 206 --------NRHGRTALHFCAAKGNLKAIKVLMKY-KPDLTNVRDNEGTLPVQLAALYGH----KDTFQYLLKETHGVDIY 272 (770)
Q Consensus 206 --------d~~g~T~Lh~A~~~g~~~iv~~Ll~~-~~~l~~~~d~~g~tpL~~A~~~g~----~~~v~~Ll~~~~~~~~~ 272 (770)
+..|.||||.|+..|+.+++++|++. +.+ ++..|..|.||||+|+..++ .+++++|++.|++++ .
T Consensus 137 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~-~ 214 (285)
T 1wdy_A 137 TKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD-VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN-V 214 (285)
T ss_dssp CCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCC-TTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSS-C
T ss_pred cHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCC-CCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCC-C
Confidence 78899999999999999999999998 888 89999999999999999999 899999999999998 5
Q ss_pred cCCCCchHHHHHHHhchHHHHHHHHh-hCCCCcccCCCCCCCHHHHHH
Q 004165 273 SGNDGALVLANLIHARLYDVALDLLK-LHPTIGRDNIDSRRIVLKTLA 319 (770)
Q Consensus 273 ~~~~g~t~Lh~A~~~~~~~iv~~Ll~-~~~~~~~~~d~~g~tpL~~Aa 319 (770)
.+..|.||||+|+..|+.+++++|++ .+.+++ .+|.+|.||||+|+
T Consensus 215 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~-~~~~~g~t~l~~A~ 261 (285)
T 1wdy_A 215 RGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN-DTDSDGKTALLLAV 261 (285)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTT-CCCTTSCCHHHHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhccCCCcc-ccCCCCCcHHHHHH
Confidence 99999999999999999999999999 666665 55555555555443
No 13
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2.1e-37 Score=337.04 Aligned_cols=280 Identities=15% Similarity=0.060 Sum_probs=220.7
Q ss_pred chhHHHHHhcCChHHHHHHHHhhHHHHhccCCCCCcccchhHH-HHHHHHhcCHHHHHHHHHHHHhccccccccccccCC
Q 004165 54 YCLLYAMIESNDWQGVEDFVKQTKEAQSSKDAQGNEYYDLSWT-LCRMIEINDRQGAEDLVKEVKEAKSSEDAQRDEYYG 132 (770)
Q Consensus 54 t~Lh~A~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~~~t-L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 132 (770)
+++.-+...++ .+.+++++.. ..+..|+| ||+|+..+. ++++.|+ ..+.+..+...
T Consensus 68 ~~~~~~~~~g~---------~~~~~~~~~~-----~~~~~g~t~L~~Aa~~~~-~~~~~L~--------~~~~n~~d~~~ 124 (373)
T 2fo1_E 68 GYGNGNDFLGD---------FNHTNLQIPT-----EPEPESPIKLHTEAAGSY-AITEPIT--------RESVNIIDPRH 124 (373)
T ss_dssp ----------------------------------------CCCHHHHHHHSSS-CCCSCCS--------TTTTTTCCCSS
T ss_pred ccCCCCCcccc---------cccccccccc-----CCCCCCccHHHHHhcCCc-hHHHHhc--------cccccccCCcC
Confidence 44455555566 5555555433 34555666 999999554 5555554 23334344456
Q ss_pred CCcHHHHHHHcCCHHHHHHHHh-------hCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccc
Q 004165 133 RYWPLYKMTQKNDWRGVEDFVG-------EHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQ 205 (770)
Q Consensus 133 g~t~L~~A~~~g~~~~v~~LL~-------~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~ 205 (770)
|+||||+||..|+.++++.|+. +.+.+++.+|..|.||||+ |+. .|+ .++|++|++.| ++++.+
T Consensus 125 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~-A~~-----~g~-~~iv~~Ll~~g--a~~~~~ 195 (373)
T 2fo1_E 125 NRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLML-AVL-----ARR-RRLVAYLMKAG--ADPTIY 195 (373)
T ss_dssp CCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHH-HHH-----HTC-HHHHHHHHHTT--CCSCCC
T ss_pred CCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHH-HHH-----cCh-HHHHHHHHHCC--CCCccc
Confidence 9999999999999999887764 6899999999999999999 999 999 99999999999 999999
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHhcC---CCCccCCCCCCCcHHHHHHHcC---ChhHHHHHHhhcCCCCc-------c
Q 004165 206 NRHGRTALHFCAAKGNLKAIKVLMKYK---PDLTNVRDNEGTLPVQLAALYG---HKDTFQYLLKETHGVDI-------Y 272 (770)
Q Consensus 206 d~~g~T~Lh~A~~~g~~~iv~~Ll~~~---~~l~~~~d~~g~tpL~~A~~~g---~~~~v~~Ll~~~~~~~~-------~ 272 (770)
|..|.||||+|+..|+.+++++|++.+ .+ ++..|..|.||||+|+..| +.+++++|++.|++++. .
T Consensus 196 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~ 274 (373)
T 2fo1_E 196 NKSERSALHQAAANRDFGMMVYMLNSTKLKGD-IEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDS 274 (373)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHT-TSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSS
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHhcCccccC-hhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCc
Confidence 999999999999999999999999998 67 8999999999999999998 89999999999998873 2
Q ss_pred cCCCCchHHHHHHHhchHHHHHHHHhhC-CCCcccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCC
Q 004165 273 SGNDGALVLANLIHARLYDVALDLLKLH-PTIGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPS 351 (770)
Q Consensus 273 ~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~-~~~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~ 351 (770)
.+..|.||||+|+..|+.+++++|++++ .+++ .+|.+|
T Consensus 275 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n-~~d~~g---------------------------------------- 313 (373)
T 2fo1_E 275 EKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKD-KQDEDG---------------------------------------- 313 (373)
T ss_dssp SSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTT-CCCTTC----------------------------------------
T ss_pred ccccCCCHHHHHHHhCCHHHHHHHHHhcCCCcc-CcCCCC----------------------------------------
Confidence 5678999999999999999999999987 5544 455444
Q ss_pred CCCCCCcccccccccccccccccCCCCCCCCCCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHH
Q 004165 352 IQTNDDETVDRDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVR 431 (770)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~ 431 (770)
T Consensus 314 -------------------------------------------------------------------------------- 313 (373)
T 2fo1_E 314 -------------------------------------------------------------------------------- 313 (373)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhccccCCccccCCcchHHHHHHHcCcHHHHHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcC
Q 004165 432 IICQGVIWTNPENRDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVN 505 (770)
Q Consensus 432 ~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~ 505 (770)
.||||+|+..|+.++|++|++.+.+ ++.+|..|+||||+|+.+|+.+++++|++.+
T Consensus 314 -----------------~TpL~~A~~~g~~~iv~~Ll~~gad-~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~ 369 (373)
T 2fo1_E 314 -----------------KTPIMLAAQEGRIEVVMYLIQQGAS-VEAVDATDHTARQLAQANNHHNIVDIFDRCR 369 (373)
T ss_dssp -----------------CCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC
T ss_pred -----------------CCHHHHHHHcCCHHHHHHHHHcCCC-ccCCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 4556666777889999999999877 7889999999999999999999999999977
No 14
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.9e-36 Score=314.42 Aligned_cols=258 Identities=11% Similarity=0.051 Sum_probs=202.0
Q ss_pred hhHH-HHHHHHhcCHHHHHHHHHHHHhccc----cccccccccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCC
Q 004165 93 LSWT-LCRMIEINDRQGAEDLVKEVKEAKS----SEDAQRDEYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGH 167 (770)
Q Consensus 93 ~~~t-L~~A~~~g~~~~v~~Ll~~~~~~~~----~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g 167 (770)
.+.| ||+|+..|+.+.+..++........ ........+..|+||||+||..|+.++++.|+. .+.+++.+|..|
T Consensus 14 ~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~-~g~~~~~~~~~g 92 (285)
T 3d9h_A 14 LVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLIS-QGWAVNIITADH 92 (285)
T ss_dssp ----------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHH-TTCCSCEECTTC
T ss_pred HHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCC
Confidence 3445 9999999998888887654322110 011122345569999999999999999998775 578999999999
Q ss_pred CCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHH
Q 004165 168 KTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPV 247 (770)
Q Consensus 168 ~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL 247 (770)
.||||+ |+. .|+ .+++++|++.| ++++.+|..|.||||+|+..|+.+++++|++.+++ ++.. ..|.|||
T Consensus 93 ~t~L~~-A~~-----~g~-~~~v~~Ll~~g--a~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~-~~g~t~L 161 (285)
T 3d9h_A 93 VSPLHE-ACL-----GGH-LSCVKILLKHG--AQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGAS-VQPE-SDLASPI 161 (285)
T ss_dssp CCHHHH-HHH-----TTC-HHHHHHHHHTT--CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SSCS-CTTSCHH
T ss_pred CCHHHH-HHH-----CCc-HHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCC-CCCC-CCCCCHH
Confidence 999999 999 999 99999999999 99999999999999999999999999999999998 5654 4599999
Q ss_pred HHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCCCcccC
Q 004165 248 QLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKPYAFAS 327 (770)
Q Consensus 248 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~~~~~s 327 (770)
|+|+..|+.+++++|++.|++++ ..+.+|.||||+|+..|+.+++++|++.+++++ .|.
T Consensus 162 ~~A~~~g~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~--~~~------------------ 220 (285)
T 3d9h_A 162 HEAARRGHVECVNSLIAYGGNID-HKISHLGTPLYLACENQQRACVKKLLESGADVN--QGK------------------ 220 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTT-CCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT--CCB------------------
T ss_pred HHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC--CCC------------------
Confidence 99999999999999999999988 599999999999999999999999999988765 233
Q ss_pred CCcchhhhHHHhhccccccccCCCCCCCCCcccccccccccccccccCCCCCCCCCCcccccccchhhhHhHHHHHHHHh
Q 004165 328 GSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLM 407 (770)
Q Consensus 328 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (770)
T Consensus 221 -------------------------------------------------------------------------------- 220 (285)
T 3d9h_A 221 -------------------------------------------------------------------------------- 220 (285)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccccCCcchHHHHHHHcCcHHHHHHHHHhCCccccccccCCchHHH
Q 004165 408 RLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPENRDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFD 487 (770)
Q Consensus 408 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH 487 (770)
.|.||||+|+..|+.++|++|++.+.+ ++.+|.+|+||||
T Consensus 221 ---------------------------------------~g~t~L~~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~t~l~ 260 (285)
T 3d9h_A 221 ---------------------------------------GQDSPLHAVVRTASEELACLLMDFGAD-TQAKNAEGKRPVE 260 (285)
T ss_dssp ---------------------------------------TTBCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCGGG
T ss_pred ---------------------------------------CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHH
Confidence 345666677777889999999998877 8899999999999
Q ss_pred HHHhcChhHHHHHHhhcC
Q 004165 488 LAVLHRREKVFNLIHGVN 505 (770)
Q Consensus 488 ~Av~~g~~~iv~~Ll~~~ 505 (770)
+|+ ++.+++++|++..
T Consensus 261 ~A~--~~~~~~~~Ll~~~ 276 (285)
T 3d9h_A 261 LVP--PESPLAQLFLERE 276 (285)
T ss_dssp GSC--TTSHHHHHHHHHC
T ss_pred Hhc--CccHHHHHHHHhh
Confidence 999 4568999999874
No 15
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=9.4e-36 Score=302.50 Aligned_cols=220 Identities=19% Similarity=0.155 Sum_probs=199.1
Q ss_pred ccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccC
Q 004165 159 ALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNV 238 (770)
Q Consensus 159 ~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~ 238 (770)
+++.+|..|.||||+ |+. .|+ .+++++|++.| ++++..|..|.||||+|+..|+.+++++|++.|++ ++.
T Consensus 3 ~~~~~~~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~ 72 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHA-AAE-----AGH-VDICHMLVQAG--ANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL-VDP 72 (237)
T ss_dssp CCCCSSCCSCCHHHH-HHH-----HTC-HHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-CCC
T ss_pred CcccccCCCCCHHHH-HHH-----cCc-HHHHHHHHHcC--CCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC-CCC
Confidence 567788889999999 999 999 99999999999 89999999999999999999999999999999999 899
Q ss_pred CCCCCCcHHHHHHHcCChhHHHHHHhhc-CCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHH
Q 004165 239 RDNEGTLPVQLAALYGHKDTFQYLLKET-HGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKT 317 (770)
Q Consensus 239 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~ 317 (770)
+|..|.||||+|+..|+.+++++|++.+ .+.+ ..+..|.||||+|+..|+.+++++|+++++++. .+|.+
T Consensus 73 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~------- 143 (237)
T 3b7b_A 73 KDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVN-CQDDGGWTPMIWATEYKHVDLVKLLLSKGSDIN-IRDNE------- 143 (237)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTT-------
T ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcc-cCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-ccCCC-------
Confidence 9999999999999999999999999998 5666 588999999999999999999999999988765 34433
Q ss_pred HHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCcccccccccccccccccCCCCCCCCCCcccccccchhhhH
Q 004165 318 LAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHK 397 (770)
Q Consensus 318 Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 397 (770)
T Consensus 144 -------------------------------------------------------------------------------- 143 (237)
T 3b7b_A 144 -------------------------------------------------------------------------------- 143 (237)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccccCCcchHHHHHHHcCcHHHHHHHHHhCCccccc
Q 004165 398 LHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPENRDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHL 477 (770)
Q Consensus 398 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~ 477 (770)
|.||||.|+..|+.++++.|++.+.+ ++.
T Consensus 144 --------------------------------------------------g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~ 172 (237)
T 3b7b_A 144 --------------------------------------------------ENICLHWAAFSGCVDIAEILLAAKCD-LHA 172 (237)
T ss_dssp --------------------------------------------------SCCHHHHHHHHCCHHHHHHHHTTTCC-TTC
T ss_pred --------------------------------------------------CCCHHHHHHHCCCHHHHHHHHHcCCC-CCC
Confidence 45566677777889999999999877 788
Q ss_pred cccCCchHHHHHHhcChhHHHHHHhhcCcccccccccccCCCchhhhhhccCCC
Q 004165 478 FAQDEHRIFDLAVLHRREKVFNLIHGVNFTTFLFSFRDFLGNNILHLAGRLVPS 531 (770)
Q Consensus 478 ~d~~G~T~LH~Av~~g~~~iv~~Ll~~~~~~~~~n~~D~~G~T~LHlAa~~g~~ 531 (770)
+|..|+||||+|+++|+.+++++|++.+ .+++.+|.+|+||||+|+..|+.
T Consensus 173 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---ad~~~~d~~g~t~l~~A~~~~~~ 223 (237)
T 3b7b_A 173 VNIHGDSPLHIAARENRYDCVVLFLSRD---SDVTLKNKEGETPLQCASLNSQV 223 (237)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHTTT---CCTTCCCTTSCCHHHHSCTTCHH
T ss_pred cCCCCCCHHHHHHHhCCHhHHHHHHHcC---CCCCccCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999988 89999999999999999999874
No 16
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=8.1e-36 Score=306.40 Aligned_cols=225 Identities=19% Similarity=0.184 Sum_probs=176.9
Q ss_pred CCCcHHHHHHHcC-------------CHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCC
Q 004165 132 GRYWPLYKMTQKN-------------DWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVV 198 (770)
Q Consensus 132 ~g~t~L~~A~~~g-------------~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~ 198 (770)
.|+||||+|+..| +.++++.|+.......+..|..|.||||+ |+. .|+ .+++++|++.|
T Consensus 9 ~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~g- 80 (253)
T 1yyh_A 9 DGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHL-AAR-----YSR-SDAAKRLLEAS- 80 (253)
T ss_dssp -------------------------------------------CCCTTSCCHHHH-HHH-----TTC-HHHHHHHHHTT-
T ss_pred CCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHH-HHH-----cCC-HHHHHHHHHcC-
Confidence 3666666666655 89999988866444445568899999999 999 999 99999999999
Q ss_pred hhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCc
Q 004165 199 PEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGA 278 (770)
Q Consensus 199 ~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 278 (770)
++++.+|..|.||||+|+..|+.+++++|++.++..++.+|..|.||||+|+..|+.+++++|++.|++++ ..+..|.
T Consensus 81 -~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~ 158 (253)
T 1yyh_A 81 -ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN-AVDDLGK 158 (253)
T ss_dssp -CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTT-CBCTTSC
T ss_pred -CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCC-CcCCCCC
Confidence 99999999999999999999999999999999984489999999999999999999999999999999998 5999999
Q ss_pred hHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCc
Q 004165 279 LVLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDE 358 (770)
Q Consensus 279 t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 358 (770)
||||+|+..|+.+++++|+++|+++. .+|.+|
T Consensus 159 t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g----------------------------------------------- 190 (253)
T 1yyh_A 159 SALHWAAAVNNVDAAVVLLKNGANKD-MQNNRE----------------------------------------------- 190 (253)
T ss_dssp BHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTS-----------------------------------------------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCC-----------------------------------------------
Confidence 99999999999999999999998876 444444
Q ss_pred ccccccccccccccccCCCCCCCCCCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccc
Q 004165 359 TVDRDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVI 438 (770)
Q Consensus 359 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~ 438 (770)
T Consensus 191 -------------------------------------------------------------------------------- 190 (253)
T 1yyh_A 191 -------------------------------------------------------------------------------- 190 (253)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCccccCCcchHHHHHHHcCcHHHHHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcC
Q 004165 439 WTNPENRDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVN 505 (770)
Q Consensus 439 ~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~ 505 (770)
.||||+|+..|+.++|+.|++.+.+ ++.+|..|+||||+|+++|+.+|+++|....
T Consensus 191 ----------~tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 191 ----------ETPLFLAAREGSYETAKVLLDHFAN-RDITDHMDRLPRDIAQERMHHDIVRLLDLEH 246 (253)
T ss_dssp ----------CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHC--
T ss_pred ----------CCHHHHHHHCCCHHHHHHHHHcCCC-ccccccCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 4556666677889999999999887 7889999999999999999999999998765
No 17
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.1e-36 Score=328.31 Aligned_cols=249 Identities=11% Similarity=-0.017 Sum_probs=214.7
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCC
Q 004165 131 YGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGR 210 (770)
Q Consensus 131 ~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~ 210 (770)
..|.||||+||..|+.++|++|++ .+.+++.+|..|.||||+ |+. .|+ .++|++|++.| +++ .+..|.
T Consensus 18 ~~g~t~L~~Aa~~g~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~g--~~~--~~~~g~ 85 (364)
T 3ljn_A 18 DENMEKIHVAARKGQTDEVRRLIE-TGVSPTIQNRFGCTALHL-ACK-----FGC-VDTAKYLASVG--EVH--SLWHGQ 85 (364)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHH-HHH-----HCC-HHHHHHHHHHC--CCC--CCBTTB
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCcHHHH-HHH-----cCC-HHHHHHHHHCC--CCc--cccCCC
Confidence 348899999999999999998775 578999999999999999 999 999 99999999999 643 345799
Q ss_pred cHHHHHHHcCCHHHHHHHHhc----CCCCccC-----------------CCCCCCcHHHHHHHcC--ChhHHHHHHhhcC
Q 004165 211 TALHFCAAKGNLKAIKVLMKY----KPDLTNV-----------------RDNEGTLPVQLAALYG--HKDTFQYLLKETH 267 (770)
Q Consensus 211 T~Lh~A~~~g~~~iv~~Ll~~----~~~l~~~-----------------~d~~g~tpL~~A~~~g--~~~~v~~Ll~~~~ 267 (770)
||||+|+..|+.+++++|++. +.+ ++. .|..|.||||+|+..| +.+++++|++.|+
T Consensus 86 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga 164 (364)
T 3ljn_A 86 KPIHLAVMANKTDLVVALVEGAKERGQM-PESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGA 164 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHHTCC-HHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTC
T ss_pred CHHHHHHHcCCHHHHHHHHHhccccCCC-HHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCC
Confidence 999999999999999999998 776 565 8889999999999999 9999999999999
Q ss_pred CCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCc----ccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccc
Q 004165 268 GVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIG----RDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIP 343 (770)
Q Consensus 268 ~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~----~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~ 343 (770)
+++ ..+..|.||||+|+..|+.+++++|++++++.. +..|.
T Consensus 165 ~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~---------------------------------- 209 (364)
T 3ljn_A 165 SPT-AKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANK---------------------------------- 209 (364)
T ss_dssp CTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCT----------------------------------
T ss_pred CCc-ccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCC----------------------------------
Confidence 988 589999999999999999999999999988731 02222
Q ss_pred cccccCCCCCCCCCcccccccccccccccccCCCCCCCCCCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhh
Q 004165 344 ARKELVPSIQTNDDETVDRDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTH 423 (770)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 423 (770)
T Consensus 210 -------------------------------------------------------------------------------- 209 (364)
T 3ljn_A 210 -------------------------------------------------------------------------------- 209 (364)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhhccccCCccccCCcchHHHHHHHcCcHHHHHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhh
Q 004165 424 MRTVEIVRIICQGVIWTNPENRDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHG 503 (770)
Q Consensus 424 ~~~~~~l~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~ 503 (770)
.|.||||+||..|+.++|+.|++.+.+ ++.+|..|+||||+|+.+|+.+++++|++
T Consensus 210 -----------------------~g~t~L~~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 265 (364)
T 3ljn_A 210 -----------------------QGNSHLHWAILINWEDVAMRFVEMGID-VNMEDNEHTVPLYLSVRAAMVLLTKELLQ 265 (364)
T ss_dssp -----------------------TCCCTTHHHHTTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTCCHHHHHHHHH
T ss_pred -----------------------CCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHhChHHHHHHHHH
Confidence 466777788888899999999999887 78999999999999999999999999999
Q ss_pred cCcc---------cccccccccCCCchhhhhhccCCC
Q 004165 504 VNFT---------TFLFSFRDFLGNNILHLAGRLVPS 531 (770)
Q Consensus 504 ~~~~---------~~~~n~~D~~G~T~LHlAa~~g~~ 531 (770)
.+.. .......|..|+|||+.|+..|+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~ 302 (364)
T 3ljn_A 266 KTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSK 302 (364)
T ss_dssp HSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHH
T ss_pred cCCchhhhcCcccCcccccccccccccchhhhhccCH
Confidence 8711 112233788999999999999874
No 18
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=5.3e-37 Score=333.10 Aligned_cols=235 Identities=13% Similarity=0.055 Sum_probs=209.1
Q ss_pred hhhccccccCCCchhHHHHHhcCChHHHHHHHHhhHHHHhccCCCCCcccchhHH-HHHHHHhcCHHHHHHHHHHHHhcc
Q 004165 42 SKDAQKNEYYGPYCLLYAMIESNDWQGVEDFVKQTKEAQSSKDAQGNEYYDLSWT-LCRMIEINDRQGAEDLVKEVKEAK 120 (770)
Q Consensus 42 ~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~~~t-L~~A~~~g~~~~v~~Ll~~~~~~~ 120 (770)
..+.+..|..|.||||+|+..++ .+.+++|+++|++++..|..|.| ||+|+..|+.++++.|++.+.
T Consensus 10 ~~~~~~~d~~g~t~L~~Aa~~g~---------~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~--- 77 (364)
T 3ljn_A 10 KLNRIKSDDENMEKIHVAARKGQ---------TDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGE--- 77 (364)
T ss_dssp ------CCHHHHHHHHHHHHHTC---------HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCC---
T ss_pred CCCccccCCCCCCHHHHHHHcCC---------HHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCC---
Confidence 45566778899999999999999 99999999999999999999988 999999999999999996653
Q ss_pred ccccccccccCCCCcHHHHHHHcCCHHHHHHHHhhC---Cccccc-----------------ccCCCCCHHHHHHhcccc
Q 004165 121 SSEDAQRDEYYGRYWPLYKMTQKNDWRGVEDFVGEH---PDALTD-----------------KIDGHKTIFHLIAMLLVD 180 (770)
Q Consensus 121 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~LL~~~---~~~~~~-----------------~d~~g~t~Lh~~A~~~~~ 180 (770)
.. ....|.||||+|+..|+.++++.|++.. +.+++. .|..|.||||+ |+.
T Consensus 78 -----~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~-A~~--- 147 (364)
T 3ljn_A 78 -----VH-SLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHW-CVG--- 147 (364)
T ss_dssp -----CC-CCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHH-HHH---
T ss_pred -----Cc-cccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHH-HHH---
Confidence 11 1235899999999999999999888651 555555 88889999999 999
Q ss_pred ccCC--chHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCC----ccCCCCCCCcHHHHHHHcC
Q 004165 181 VESD--EGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDL----TNVRDNEGTLPVQLAALYG 254 (770)
Q Consensus 181 ~~~g--~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l----~~~~d~~g~tpL~~A~~~g 254 (770)
.| + .++|++|++.| ++++.+|..|.||||+|+..|+.+++++|++.+++. ++..|..|.||||+|+..|
T Consensus 148 --~g~~~-~~~v~~Ll~~g--a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g 222 (364)
T 3ljn_A 148 --LGPEY-LEMIKILVQLG--ASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILIN 222 (364)
T ss_dssp --SCGGG-HHHHHHHHHHT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTT
T ss_pred --cCCch-HHHHHHHHHcC--CCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcC
Confidence 99 9 99999999999 999999999999999999999999999999998873 6889999999999999999
Q ss_pred ChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCc
Q 004165 255 HKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIG 304 (770)
Q Consensus 255 ~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~ 304 (770)
+.+++++|+++|++++ ..|.+|.||||+|+..|+.+++++|++++++..
T Consensus 223 ~~~~v~~Ll~~gad~~-~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~ 271 (364)
T 3ljn_A 223 WEDVAMRFVEMGIDVN-MEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFL 271 (364)
T ss_dssp CHHHHHHHHTTTCCTT-CCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHH
T ss_pred CHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHhChHHHHHHHHHcCCchh
Confidence 9999999999999999 599999999999999999999999999987653
No 19
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.9e-35 Score=300.79 Aligned_cols=163 Identities=19% Similarity=0.241 Sum_probs=130.3
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHh---hCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccC
Q 004165 131 YGRYWPLYKMTQKNDWRGVEDFVG---EHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNR 207 (770)
Q Consensus 131 ~~g~t~L~~A~~~g~~~~v~~LL~---~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~ 207 (770)
..|+||||+||..|+.+++++|++ +.+.+++.+|..|.||||+ |+. .|+ .+++++|++.| ++++.+|.
T Consensus 7 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~-A~~-----~~~-~~~v~~Ll~~g--~~~~~~~~ 77 (241)
T 1k1a_A 7 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHL-AVI-----TTL-PSVVRLLVTAG--ASPMALDR 77 (241)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCT
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHH-HHH-----cCC-HHHHHHHHHcC--CCccccCC
Confidence 447888888888888888887776 3677788888888888888 888 888 88888888888 77788888
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCC----CCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccC-CCCchHHH
Q 004165 208 HGRTALHFCAAKGNLKAIKVLMKYKP----DLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSG-NDGALVLA 282 (770)
Q Consensus 208 ~g~T~Lh~A~~~g~~~iv~~Ll~~~~----~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~t~Lh 282 (770)
.|.||||+|+..|+.+++++|++.++ + ++..|..|.||||+|+..|+.+++++|++.|++++. .+ ..|.||||
T Consensus 78 ~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~g~t~L~ 155 (241)
T 1k1a_A 78 HGQTAAHLACEHRSPTCLRALLDSAAPGTLD-LEARNYDGLTALHVAVNTECQETVQLLLERGADIDA-VDIKSGRSPLI 155 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHSCTTSCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTTCCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-ccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCccc-ccccCCCcHHH
Confidence 88888888888888888888888876 5 677778888888888888888888888888777773 55 67888888
Q ss_pred HHHHhchHHHHHHHHhhCCCCc
Q 004165 283 NLIHARLYDVALDLLKLHPTIG 304 (770)
Q Consensus 283 ~A~~~~~~~iv~~Ll~~~~~~~ 304 (770)
+|+..|+.+++++|+++|++++
T Consensus 156 ~A~~~~~~~~v~~Ll~~g~~~~ 177 (241)
T 1k1a_A 156 HAVENNSLSMVQLLLQHGANVN 177 (241)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHcCCHHHHHHHHHcCCCCC
Confidence 8888888888888888877665
No 20
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.2e-35 Score=305.16 Aligned_cols=241 Identities=17% Similarity=0.115 Sum_probs=137.5
Q ss_pred hccccccCCCchhHHHHHhcCChHH----HHHHHHhhHHHHhccCCCCCcc-cchhHH-HHHHHHhcCHHHHHHHHHHHH
Q 004165 44 DAQKNEYYGPYCLLYAMIESNDWQG----VEDFVKQTKEAQSSKDAQGNEY-YDLSWT-LCRMIEINDRQGAEDLVKEVK 117 (770)
Q Consensus 44 ~~~~~d~~g~t~Lh~A~~~~~~~~~----~~~~~~~~~~~Ll~~g~~~~~~-~~~~~t-L~~A~~~g~~~~v~~Ll~~~~ 117 (770)
|++..|.+|.||||+|+..++..+. .+.--.+.++.|++.|++++.. |..|+| ||+|+..|+.++++.|++.+.
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 81 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA 81 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 5678899999999999998731000 0000156667777777776543 566666 777777777777777775432
Q ss_pred hccccccccccccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcC
Q 004165 118 EAKSSEDAQRDEYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIV 197 (770)
Q Consensus 118 ~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~ 197 (770)
..+. .+..|+||||+|+..|+.++++.|+...+.+++.++..|.||||+ |+. .|+ .+++++|++.|
T Consensus 82 ----~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~-A~~-----~~~-~~~v~~Ll~~g 147 (253)
T 1yyh_A 82 ----DANI---QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLIL-AAR-----LAV-EGMLEDLINSH 147 (253)
T ss_dssp ----CTTC---CCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHH-HHH-----HTC-SSHHHHHHHTT
T ss_pred ----CCCC---CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHH-HHH-----cCh-HHHHHHHHHcC
Confidence 1111 123477777777777777777776665555777777777777777 777 777 77777777777
Q ss_pred ChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCC
Q 004165 198 VPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDG 277 (770)
Q Consensus 198 ~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g 277 (770)
++++.+|..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..|..|
T Consensus 148 --~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g 223 (253)
T 1yyh_A 148 --ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLDHFANRD-ITDHMD 223 (253)
T ss_dssp --CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTC
T ss_pred --CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcc-ccccCC
Confidence 77777777777777777777777777777777777 67777777777777777777777777777777777 377777
Q ss_pred chHHHHHHHhchHHHHHHHHhhCCC
Q 004165 278 ALVLANLIHARLYDVALDLLKLHPT 302 (770)
Q Consensus 278 ~t~Lh~A~~~~~~~iv~~Ll~~~~~ 302 (770)
.||||+|+..|+.+++++|.+..+.
T Consensus 224 ~tpl~~A~~~g~~~i~~~l~~~~~~ 248 (253)
T 1yyh_A 224 RLPRDIAQERMHHDIVRLLDLEHHH 248 (253)
T ss_dssp CCHHHHHHHTTCHHHHHHHHC----
T ss_pred CCHHHHHHHcCCHHHHHHHHHHhhh
Confidence 7777777777777777777766443
No 21
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2.8e-35 Score=307.14 Aligned_cols=253 Identities=13% Similarity=0.021 Sum_probs=181.4
Q ss_pred cccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhh---hccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCc
Q 004165 160 LTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEA---LARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLT 236 (770)
Q Consensus 160 ~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~---~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~ 236 (770)
++.+|..|+||||+ |+. .|+ .++|++|++.| ++ ++.+|..|.||||+|+..|+.+++++|+++|++ +
T Consensus 2 ~~~~d~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~g--~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~ 71 (282)
T 1oy3_D 2 FGYVTEDGDTALHL-AVI-----HQH-EPFLDFLLGFS--AGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG-V 71 (282)
T ss_dssp CCCCCTTCCCHHHH-HHH-----TTC-HHHHHHHHHHH--TTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-S
T ss_pred CCccCCCCCcHHHH-HHH-----cCC-HHHHHHHHhcC--CCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-C
Confidence 46788999999999 999 999 99999999998 65 889999999999999999999999999999999 8
Q ss_pred cCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCc------------ccCCCCchHHHHHHHhchHHHH-HHHHhhCCCC
Q 004165 237 NVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDI------------YSGNDGALVLANLIHARLYDVA-LDLLKLHPTI 303 (770)
Q Consensus 237 ~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~------------~~~~~g~t~Lh~A~~~~~~~iv-~~Ll~~~~~~ 303 (770)
+.+|..|.||||+|+..|+.+++++|++.+++... .....+.++++.++..+..... ..+...+.++
T Consensus 72 ~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (282)
T 1oy3_D 72 LVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQL 151 (282)
T ss_dssp SCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGT
T ss_pred CCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcC
Confidence 99999999999999999999999999999876432 2234566777777766554333 3333444444
Q ss_pred cccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCcccccccccccccccccCCCCCCCCC
Q 004165 304 GRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDVENLTVTSKIHSKKPTPFGS 383 (770)
Q Consensus 304 ~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 383 (770)
. .+|..|.||||+|+..++ ..
T Consensus 152 ~-~~~~~g~t~L~~A~~~g~-------~~--------------------------------------------------- 172 (282)
T 1oy3_D 152 E-AENYDGHTPLHVAVIHKD-------AE--------------------------------------------------- 172 (282)
T ss_dssp T-CCCTTSCCHHHHHHHTTC-------HH---------------------------------------------------
T ss_pred C-CcCCCCcCHHHHHHHcCC-------HH---------------------------------------------------
Confidence 4 788899999999998773 11
Q ss_pred CcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccccCCcchHHHHHHHcCcHHH
Q 004165 384 TQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPENRDRLLGAMFTAARLGIPEF 463 (770)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~ei 463 (770)
++++|.. .....+......|.||||+||..|+.++
T Consensus 173 ------------------------------------------~v~~Ll~---~g~~~~~~~~~~g~tpL~~A~~~~~~~~ 207 (282)
T 1oy3_D 173 ------------------------------------------MVRLLRD---AGADLNKPEPTCGRTPLHLAVEAQAASV 207 (282)
T ss_dssp ------------------------------------------HHHHHHH---HTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred ------------------------------------------HHHHHHH---cCCCCCCCCCCCCcCHHHHHHHcCCHHH
Confidence 2222222 2222222221258999999999999999
Q ss_pred HHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcCcccccccccccCCCchhhhhhccCC
Q 004165 464 VNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVNFTTFLFSFRDFLGNNILHLAGRLVP 530 (770)
Q Consensus 464 v~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~~~~~~~n~~D~~G~T~LHlAa~~g~ 530 (770)
|+.|++.+.+ ++.+|..|+||||+|+++|+.+++++|++.| ++++.+|.+|.|||++|....+
T Consensus 208 v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 208 LELLLKAGAD-PTARMYGGRTPLGSALLRPNPILARLLRAHG---APEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp HHHHHHTTCC-TTCCCTTSCCHHHHHHTSSCHHHHHHHHHTT---CCCCCCC---------------
T ss_pred HHHHHHcCCC-CcccccCCCCHHHHHHHcCCcHHHHHHHHcC---CCcCcCCCcccccccccCCccc
Confidence 9999999877 7899999999999999999999999999998 8999999999999999998765
No 22
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=6.9e-35 Score=294.87 Aligned_cols=224 Identities=14% Similarity=0.091 Sum_probs=205.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCc
Q 004165 132 GRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRT 211 (770)
Q Consensus 132 ~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T 211 (770)
.+.+|||.|+..|+.+.++.++...+..++.+|..|.||||+ |+. .|+ .+++++|++.| ++++.+|..|.|
T Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~g--~~~~~~~~~g~t 75 (231)
T 3aji_A 5 VSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHW-ACS-----AGH-TEIVEFLLQLG--VPVNDKDDAGWS 75 (231)
T ss_dssp CSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHH-HHH-----HTC-HHHHHHHHHTT--CCSCCCCTTSCC
T ss_pred cccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHH-HHH-----cCc-HHHHHHHHHhC--CCCCCcCCCCCC
Confidence 377999999999999999999999888889999999999999 999 999 99999999999 899999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHH
Q 004165 212 ALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYD 291 (770)
Q Consensus 212 ~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~ 291 (770)
|||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+
T Consensus 76 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~ 153 (231)
T 3aji_A 76 PLHIAASAGXDEIVKALLVKGAH-VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPD-AKDHYDATAMHRAAAKGNLK 153 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHH
T ss_pred HHHHHHHcCHHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHHcCCHH
Confidence 99999999999999999999999 89999999999999999999999999999999988 58999999999999999999
Q ss_pred HHHHHHhhCCCCcccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCcccccccccccccc
Q 004165 292 VALDLLKLHPTIGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDVENLTVTS 371 (770)
Q Consensus 292 iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (770)
++++|++++++++ .+|.+|
T Consensus 154 ~v~~Ll~~g~~~~-~~~~~g------------------------------------------------------------ 172 (231)
T 3aji_A 154 MVHILLFYKASTN-IQDTEG------------------------------------------------------------ 172 (231)
T ss_dssp HHHHHHHTTCCSC-CCCTTS------------------------------------------------------------
T ss_pred HHHHHHhcCCCcc-ccCCCC------------------------------------------------------------
Confidence 9999999988876 444444
Q ss_pred cccCCCCCCCCCCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccccCCcchH
Q 004165 372 KIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPENRDRLLGA 451 (770)
Q Consensus 372 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~tp 451 (770)
.||
T Consensus 173 -----------------------------------------------------------------------------~t~ 175 (231)
T 3aji_A 173 -----------------------------------------------------------------------------NTP 175 (231)
T ss_dssp -----------------------------------------------------------------------------CCH
T ss_pred -----------------------------------------------------------------------------CCH
Confidence 455
Q ss_pred HHHHHHcCcHHHHHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcC
Q 004165 452 MFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVN 505 (770)
Q Consensus 452 Lh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~ 505 (770)
||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..++.+++++|.+.+
T Consensus 176 L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~ 228 (231)
T 3aji_A 176 LHLACDEERVEEAKFLVTQGAS-IYIENKEEKTPLQVAKGGLGLILKRLAEGEE 228 (231)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHhhHHHHHHHHHcccc
Confidence 5566677788999999999877 7889999999999999999999999998865
No 23
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=6.5e-35 Score=296.91 Aligned_cols=219 Identities=14% Similarity=0.071 Sum_probs=195.1
Q ss_pred cccccCCCCCHHHHHHhccccccCCchHHHHHHHHH----cCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCC
Q 004165 160 LTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLAS----IVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDL 235 (770)
Q Consensus 160 ~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~----~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l 235 (770)
++.+|.+|+||||+ |+. .|+ .+++++|++ .+ .+++.+|..|.||||+|+..|+.+++++|++.|++
T Consensus 2 ~~~~d~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~~~~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~- 71 (241)
T 1k1a_A 2 ATRADEDGDTPLHI-AVV-----QGN-LPAVHRLVNLFQQGG--RELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS- 71 (241)
T ss_dssp -----CTTCCHHHH-HHH-----TTC-HHHHHHHHHHHHHTT--CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred ccccCCCCCcHHHH-HHH-----cCC-HHHHHHHHHHHHhcC--CCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCC-
Confidence 35678899999999 999 999 999999997 56 88999999999999999999999999999999999
Q ss_pred ccCCCCCCCcHHHHHHHcCChhHHHHHHhhcC----CCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCC-CC
Q 004165 236 TNVRDNEGTLPVQLAALYGHKDTFQYLLKETH----GVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNI-DS 310 (770)
Q Consensus 236 ~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~----~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d-~~ 310 (770)
++..|..|.||||+|+..|+.+++++|++.++ +.+ ..+..|.||||+|+..|+.+++++|+++++++. ..+ .
T Consensus 72 ~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~- 148 (241)
T 1k1a_A 72 PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLE-ARNYDGLTALHVAVNTECQETVQLLLERGADID-AVDIK- 148 (241)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTT-
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc-ccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcc-ccccc-
Confidence 89999999999999999999999999999987 555 588999999999999999999999999998876 222 2
Q ss_pred CCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCcccccccccccccccccCCCCCCCCCCcccccc
Q 004165 311 RRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDVENLTVTSKIHSKKPTPFGSTQQIPTT 390 (770)
Q Consensus 311 g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 390 (770)
T Consensus 149 -------------------------------------------------------------------------------- 148 (241)
T 1k1a_A 149 -------------------------------------------------------------------------------- 148 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccccCCcchHHHHHHHcCcHHHHHHHHHh
Q 004165 391 YGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPENRDRLLGAMFTAARLGIPEFVNEFIMA 470 (770)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~ 470 (770)
.|.||||.|+..|+.++++.|++.
T Consensus 149 --------------------------------------------------------~g~t~L~~A~~~~~~~~v~~Ll~~ 172 (241)
T 1k1a_A 149 --------------------------------------------------------SGRSPLIHAVENNSLSMVQLLLQH 172 (241)
T ss_dssp --------------------------------------------------------TCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred --------------------------------------------------------CCCcHHHHHHHcCCHHHHHHHHHc
Confidence 355677777778889999999999
Q ss_pred CCccccccccCCchHHHHHHhcChhHHHHHHhhcCcccccccccccCCCchhhhhhccCCC
Q 004165 471 YDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVNFTTFLFSFRDFLGNNILHLAGRLVPS 531 (770)
Q Consensus 471 ~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~~~~~~~n~~D~~G~T~LHlAa~~g~~ 531 (770)
+.+ ++..|..|+||||+|+..|+.+++++|++.| .+++.+|..|+||||+|+..|+.
T Consensus 173 g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---a~~~~~~~~g~tpl~~A~~~~~~ 229 (241)
T 1k1a_A 173 GAN-VNAQMYSGSSALHSASGRGLLPLVRTLVRSG---ADSSLKNCHNDTPLMVARSRRVI 229 (241)
T ss_dssp TCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT---CCTTCCCTTSCCTTTTCSSHHHH
T ss_pred CCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcC---CCCCCcCCCCCCHHHHHHhcCcH
Confidence 877 7889999999999999999999999999988 88999999999999999998874
No 24
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.9e-34 Score=303.81 Aligned_cols=264 Identities=17% Similarity=0.141 Sum_probs=212.5
Q ss_pred HHHHcCCHHHHHHHHhhCCcc--------cccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCC
Q 004165 139 KMTQKNDWRGVEDFVGEHPDA--------LTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGR 210 (770)
Q Consensus 139 ~A~~~g~~~~v~~LL~~~~~~--------~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~ 210 (770)
.++..++.+.++.++...... ....+..|.||||. |+. .|+ .++|++|++.| ++++.+|..|.
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~-A~~-----~g~-~~~v~~Ll~~g--~~~~~~~~~g~ 74 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLA-ACS-----SGD-TEEVLRLLERG--ADINYANVDGL 74 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHH-HHH-----HTC-HHHHHHHHHHC--CCTTCBCTTCC
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHH-HHH-----cCC-HHHHHHHHHcC--CCCcccCCCCC
Confidence 456677777777677543211 11123445799999 999 999 99999999999 99999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchH
Q 004165 211 TALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLY 290 (770)
Q Consensus 211 T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~ 290 (770)
||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..++.
T Consensus 75 t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~ 152 (299)
T 1s70_B 75 TALHQACIDDNVDMVKFLVENGAN-INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVG-AVNSEGDTPLDIAEEEAME 152 (299)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHCCSHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHhcchH
Confidence 999999999999999999999999 89999999999999999999999999999999988 5999999999999999999
Q ss_pred HHHHHHHhhCCCCcccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCccccccccccccc
Q 004165 291 DVALDLLKLHPTIGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDVENLTVT 370 (770)
Q Consensus 291 ~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (770)
++++.++..........+..+.++++..
T Consensus 153 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~---------------------------------------------------- 180 (299)
T 1s70_B 153 ELLQNEVNRQGVDIEAARKEEERIMLRD---------------------------------------------------- 180 (299)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHH----------------------------------------------------
T ss_pred HHHHHHHhhcCCCchhhhhhhhhHHHHH----------------------------------------------------
Confidence 9999988764322111111111111111
Q ss_pred ccccCCCCCCCCCCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccccCCcch
Q 004165 371 SKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPENRDRLLG 450 (770)
Q Consensus 371 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~t 450 (770)
...+..............|.|
T Consensus 181 -----------------------------------------------------------~~~~l~~~~~~~~~~~~~g~t 201 (299)
T 1s70_B 181 -----------------------------------------------------------ARQWLNSGHINDVRHAKSGGT 201 (299)
T ss_dssp -----------------------------------------------------------HHHHHHHTCCCCCCCTTTCCC
T ss_pred -----------------------------------------------------------HHHHHhccCcchhhhcCCCCC
Confidence 111111111111111136899
Q ss_pred HHHHHHHcCcHHHHHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcCcccccccccccCCCchhhhhhcc
Q 004165 451 AMFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVNFTTFLFSFRDFLGNNILHLAGRL 528 (770)
Q Consensus 451 pLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~~~~~~~n~~D~~G~T~LHlAa~~ 528 (770)
|||+||..|+.++|+.|++.+.+ ++.+|..|+||||+|+.+|+.+++++|++.| ++++.+|..|+||||+|++.
T Consensus 202 ~L~~A~~~g~~~~v~~Ll~~g~d-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g---ad~~~~d~~g~t~l~~A~~~ 275 (299)
T 1s70_B 202 ALHVAAAKGYTEVLKLLIQARYD-VNIKDYDGWTPLHAAAHWGKEEACRILVENL---CDMEAVNKVGQTAFDVADED 275 (299)
T ss_dssp HHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT---CCTTCCCTTSCCTTTSCCSG
T ss_pred HHHHHHHCCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHhcCCHHHHHHHHHcC---CCCCCcCCCCCCHHHHHHHH
Confidence 99999999999999999998877 7899999999999999999999999999998 89999999999999999764
No 25
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=3e-34 Score=291.39 Aligned_cols=227 Identities=18% Similarity=0.097 Sum_probs=184.3
Q ss_pred hccccccCCCchhHHHHHhcCChHHHHHHHHhhHHHHhccCCCCCcccchhHH-HHHHHHhcCHHHHHHHHHHHHhcccc
Q 004165 44 DAQKNEYYGPYCLLYAMIESNDWQGVEDFVKQTKEAQSSKDAQGNEYYDLSWT-LCRMIEINDRQGAEDLVKEVKEAKSS 122 (770)
Q Consensus 44 ~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~~~t-L~~A~~~g~~~~v~~Ll~~~~~~~~~ 122 (770)
+.+..|.+|.||||+|+..++ .+.+++|+++|++++..+..|.| ||+|+..|+.++++.|++.+
T Consensus 3 ~~~~~~~~g~t~L~~A~~~g~---------~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g------ 67 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHAAAEAGH---------VDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAG------ 67 (237)
T ss_dssp CCCCSSCCSCCHHHHHHHHTC---------HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT------
T ss_pred CcccccCCCCCHHHHHHHcCc---------HHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCC------
Confidence 456778899999999999999 88899999999999988887777 88888888888888888432
Q ss_pred cccccc-ccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhh
Q 004165 123 EDAQRD-EYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEA 201 (770)
Q Consensus 123 ~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~ 201 (770)
.... .+..|.||||+|+..|+.+++++|+...+.+++..+..|.||||+ |+. .|+ .+++++|++.| ++
T Consensus 68 --~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~-A~~-----~~~-~~~~~~Ll~~g--~~ 136 (237)
T 3b7b_A 68 --ALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIW-ATE-----YKH-VDLVKLLLSKG--SD 136 (237)
T ss_dssp --CCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHH-HHH-----TTC-HHHHHHHHHTT--CC
T ss_pred --CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHH-HHH-----cCC-HHHHHHHHHCC--CC
Confidence 2221 233478888888888888888877766667888888888888888 888 888 88888888888 78
Q ss_pred hccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHH
Q 004165 202 LARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVL 281 (770)
Q Consensus 202 ~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 281 (770)
++.+|..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..|.+|.|||
T Consensus 137 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~-~~d~~g~t~l 214 (237)
T 3b7b_A 137 INIRDNEENICLHWAAFSGCVDIAEILLAAKCD-LHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVT-LKNKEGETPL 214 (237)
T ss_dssp TTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT-CCCTTSCCHH
T ss_pred CCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCC-ccCCCCCCHH
Confidence 888888888888888888888888888888888 78888888888888888888888888888888877 4788888888
Q ss_pred HHHHHhchHHHHHHHHh
Q 004165 282 ANLIHARLYDVALDLLK 298 (770)
Q Consensus 282 h~A~~~~~~~iv~~Ll~ 298 (770)
|+|+..++.+.+..|++
T Consensus 215 ~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 215 QCASLNSQVWSALQMSK 231 (237)
T ss_dssp HHSCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88888888766666554
No 26
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-35 Score=304.29 Aligned_cols=176 Identities=15% Similarity=0.161 Sum_probs=128.3
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHhhCCc-------ccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhh
Q 004165 130 YYGRYWPLYKMTQKNDWRGVEDFVGEHPD-------ALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEAL 202 (770)
Q Consensus 130 ~~~g~t~L~~A~~~g~~~~v~~LL~~~~~-------~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~ 202 (770)
+.++.+||+.||..|+.++|+.||+.... .++..+..+.||||. |+. .++..++++.|++.| +++
T Consensus 8 d~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~-a~~-----~~~~~~~v~~Ll~~G--adv 79 (269)
T 4b93_B 8 DYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQ-CPK-----CAPAQKRLAKVPASG--LGV 79 (269)
T ss_dssp CCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------------CC--CCT
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHH-HHH-----hCCHHHHHHHHHHCC--CCC
Confidence 34477999999999999999988865332 256667788999999 988 776245899999999 999
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHH
Q 004165 203 ARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLA 282 (770)
Q Consensus 203 ~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh 282 (770)
|.+|.+|+||||+|+..|+.+++++|++.+++ ++.++..|.||+|+|+..++.+++++|++.|++++ ..|..|.||||
T Consensus 80 n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~-~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n-~~d~~g~TpL~ 157 (269)
T 4b93_B 80 NVTSQDGSSPLHVAALHGRADLIPLLLKHGAN-AGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPN-KKDLSGNTPLI 157 (269)
T ss_dssp TCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTCCCHHH
T ss_pred CCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCC-cCccCCCCCCccccccccChHHHHHHHHHCCCCCC-CCCCCCCCHHH
Confidence 99999999999999999999999999999999 89999999999999999999999999999999998 59999999999
Q ss_pred HHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHH
Q 004165 283 NLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLK 316 (770)
Q Consensus 283 ~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~ 316 (770)
+|+..|+.+++++|+++|++++ .+|.+|.||||
T Consensus 158 ~A~~~g~~~~v~~Ll~~gadvn-~~~~~g~t~Lh 190 (269)
T 4b93_B 158 YACSGGHHELVALLLQHGASIN-ASNNKGNTALH 190 (269)
T ss_dssp HHHHTTCGGGHHHHHHTTCCTT-CBCTTSCBHHH
T ss_pred HHHHCCCHHHHHHHHHCCCCCC-ccccCCCcHHH
Confidence 9999999999999999998876 44444444333
No 27
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=7.3e-34 Score=286.63 Aligned_cols=211 Identities=14% Similarity=0.142 Sum_probs=186.1
Q ss_pred CCCHHHHHHhccccccCCchHHHHHHHHHcCChhh-hccccCCCCcHHHHHHHcCCHHHHHHHHhcC--CCCccC-CCCC
Q 004165 167 HKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEA-LARQNRHGRTALHFCAAKGNLKAIKVLMKYK--PDLTNV-RDNE 242 (770)
Q Consensus 167 g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~-~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~--~~l~~~-~d~~ 242 (770)
|+||||+ |+. .|+ .++++.|++.+ .+ .+.+|..|.||||+|+..|+.+++++|++.+ ++ ++. .|..
T Consensus 2 g~t~L~~-A~~-----~g~-~~~v~~Ll~~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~~~~ 71 (228)
T 2dzn_A 2 SNYPLHQ-ACM-----ENE-FFKVQELLHSK--PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN-LDDYPDDS 71 (228)
T ss_dssp -CCHHHH-HHH-----TTC-HHHHHHHHHHC--GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCC-GGGCCCTT
T ss_pred CccHHHH-HHH-----hCC-HHHHHHHHhcC--ccccccCCCCCCCHHHHHHHcCCHHHHHHHHhcccccc-ccccCCCC
Confidence 6899999 999 999 99999999999 55 4458999999999999999999999999999 66 444 8899
Q ss_pred CCcHHHHHHHcCChhHHHHHHhhc--CCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHHHh
Q 004165 243 GTLPVQLAALYGHKDTFQYLLKET--HGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAK 320 (770)
Q Consensus 243 g~tpL~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~ 320 (770)
|.||||+|+..|+.+++++|++.| ++.+ ..+..|.||||+|+..|+.+++++|+++|+++. .+|.+|
T Consensus 72 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g--------- 140 (228)
T 2dzn_A 72 GWTPFHIACSVGNLEVVKSLYDRPLKPDLN-KITNQGVTCLHLAVGKKWFEVSQFLIENGASVR-IKDKFN--------- 140 (228)
T ss_dssp SCCHHHHHHHHCCHHHHHHHHSSSSCCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSC-CCCTTS---------
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCcccc-cCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCcc-ccCCCC---------
Confidence 999999999999999999999998 5555 588999999999999999999999999988876 444444
Q ss_pred CCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCcccccccccccccccccCCCCCCCCCCcccccccchhhhHhHH
Q 004165 321 KPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHR 400 (770)
Q Consensus 321 ~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (770)
T Consensus 141 -------------------------------------------------------------------------------- 140 (228)
T 2dzn_A 141 -------------------------------------------------------------------------------- 140 (228)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccccCCcchHHHHHHHcCcHHHHHHHHHhCCcccccccc
Q 004165 401 MLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPENRDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQ 480 (770)
Q Consensus 401 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~ 480 (770)
.||||+|+..|+.++++.|++.++..++.+|.
T Consensus 141 ------------------------------------------------~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~ 172 (228)
T 2dzn_A 141 ------------------------------------------------QIPLHRAASVGSLKLIELLCGLGKSAVNWQDK 172 (228)
T ss_dssp ------------------------------------------------CCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCT
T ss_pred ------------------------------------------------CCHHHHHHHcCCHHHHHHHHhcCcccccCcCC
Confidence 45566666778899999999998666899999
Q ss_pred CCchHHHHHHhcChhHHHHHHh-hcCcccccccccccCCCchhhhhhccC
Q 004165 481 DEHRIFDLAVLHRREKVFNLIH-GVNFTTFLFSFRDFLGNNILHLAGRLV 529 (770)
Q Consensus 481 ~G~T~LH~Av~~g~~~iv~~Ll-~~~~~~~~~n~~D~~G~T~LHlAa~~g 529 (770)
.|+||||+|+..|+.+++++|+ +.| ++++.+|.+|+||||+|++.+
T Consensus 173 ~g~t~L~~A~~~~~~~~v~~Ll~~~g---a~~~~~~~~g~t~l~~A~~~~ 219 (228)
T 2dzn_A 173 QGWTPLFHALAEGHGDAAVLLVEKYG---AEYDLVDNKGAKAEDVALNEQ 219 (228)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHHC---CCSCCBCTTSCBGGGGCSSTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcC---CCCCccCCCCCcHHHHHHHHH
Confidence 9999999999999999999999 767 899999999999999998764
No 28
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1e-33 Score=285.54 Aligned_cols=174 Identities=19% Similarity=0.206 Sum_probs=155.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhcc-ccCCCCc
Q 004165 133 RYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALAR-QNRHGRT 211 (770)
Q Consensus 133 g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~-~d~~g~T 211 (770)
|+||||.|+..|+.++++.|+...+...+.+|..|.||||+ |+. .|+ .+++++|++.|.+.+++. .|..|.|
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~-A~~-----~~~-~~~v~~Ll~~~~~~~~~~~~~~~g~t 74 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHW-SVS-----FQA-HEITSFLLSKMENVNLDDYPDDSGWT 74 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHH-HHH-----TTC-HHHHHHHHHTCTTCCGGGCCCTTSCC
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHH-HHH-----cCC-HHHHHHHHhccccccccccCCCCCCC
Confidence 78999999999999999999988777777789999999999 999 999 999999999995555666 8889999
Q ss_pred HHHHHHHcCCHHHHHHHHhcC--CCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhch
Q 004165 212 ALHFCAAKGNLKAIKVLMKYK--PDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARL 289 (770)
Q Consensus 212 ~Lh~A~~~g~~~iv~~Ll~~~--~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~ 289 (770)
|||+|+..|+.+++++|++.+ ++ ++..|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+
T Consensus 75 ~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~ 152 (228)
T 2dzn_A 75 PFHIACSVGNLEVVKSLYDRPLKPD-LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVR-IKDKFNQIPLHRAASVGS 152 (228)
T ss_dssp HHHHHHHHCCHHHHHHHHSSSSCCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCcc-cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCC
Confidence 999999999999999999998 77 89999999999999999999999999999999998 599999999999999999
Q ss_pred HHHHHHHHhhC-CCCcccCCCCCCCHHH
Q 004165 290 YDVALDLLKLH-PTIGRDNIDSRRIVLK 316 (770)
Q Consensus 290 ~~iv~~Ll~~~-~~~~~~~d~~g~tpL~ 316 (770)
.+++++|++.+ .+++ .+|.+|+||||
T Consensus 153 ~~~v~~Ll~~g~~~~~-~~d~~g~t~L~ 179 (228)
T 2dzn_A 153 LKLIELLCGLGKSAVN-WQDKQGWTPLF 179 (228)
T ss_dssp HHHHHHHHTTTCCCSC-CCCTTSCCHHH
T ss_pred HHHHHHHHhcCccccc-CcCCCCCCHHH
Confidence 99999999998 5544 45544444444
No 29
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2.5e-33 Score=292.27 Aligned_cols=221 Identities=14% Similarity=0.004 Sum_probs=183.6
Q ss_pred CCcccchhHH-HHHHHHhcCHHHHHHHHHHHHhccccccccccccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccC
Q 004165 87 GNEYYDLSWT-LCRMIEINDRQGAEDLVKEVKEAKSSEDAQRDEYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKID 165 (770)
Q Consensus 87 ~~~~~~~~~t-L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~ 165 (770)
++.+|..|+| ||+|+..|+.++++.|++.+.. .......+..|+||||+|+..|+.++++.|+ +.+++++.+|.
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~----~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~ 76 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAG----HEYLDLQNDLGQTALHLAAILGEASTVEKLY-AAGAGVLVAER 76 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTT----SGGGGCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCSSCCCT
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCC----cccccccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCC
Confidence 3567778888 9999999999999999977642 1111123345999999999999999999777 56899999999
Q ss_pred CCCCHHHHHHhccccccCCchHHHHHHHHHcCCh---------------------------------------------h
Q 004165 166 GHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVP---------------------------------------------E 200 (770)
Q Consensus 166 ~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~---------------------------------------------~ 200 (770)
.|.||||+ |+. .|+ .+++++|++.+.. .
T Consensus 77 ~g~tpL~~-A~~-----~~~-~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (282)
T 1oy3_D 77 GGHTALHL-ACR-----VRA-HTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRL 149 (282)
T ss_dssp TSCCHHHH-HTT-----TTC-HHHHHHHSSSCCSSCCCC-----------------------------------CCCGGG
T ss_pred CCCCHHHH-HHH-----cCC-cchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhh
Confidence 99999999 999 999 9999999997721 2
Q ss_pred hhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCC-CCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCch
Q 004165 201 ALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDN-EGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGAL 279 (770)
Q Consensus 201 ~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~-~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t 279 (770)
+++.+|..|.||||+|+..|+.+++++|+++|++ ++..+. .|.||||+|+..|+.+++++|+++|++++ .++..|.|
T Consensus 150 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~-~~d~~g~t 227 (282)
T 1oy3_D 150 QLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD-LNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPT-ARMYGGRT 227 (282)
T ss_dssp GTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCC
T ss_pred cCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc-ccccCCCC
Confidence 3778899999999999999999999999999999 788875 49999999999999999999999999999 59999999
Q ss_pred HHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCC
Q 004165 280 VLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKP 322 (770)
Q Consensus 280 ~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~ 322 (770)
|||+|+..|+.+++++|+++|+++. .+|.+|.|||++|....
T Consensus 228 pL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 228 PLGSALLRPNPILARLLRAHGAPEP-EDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HHHHHHTSSCHHHHHHHHHTTCCCC-CCC--------------
T ss_pred HHHHHHHcCCcHHHHHHHHcCCCcC-cCCCcccccccccCCcc
Confidence 9999999999999999999999988 89999999999998765
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.2e-34 Score=293.60 Aligned_cols=221 Identities=16% Similarity=0.154 Sum_probs=173.1
Q ss_pred cccchhHH-HHHHHHhcCHHHHHHHHHHHHhcccccccc-ccccCCCCcHHHHHHHcCCHH-HHHHHHhhCCcccccccC
Q 004165 89 EYYDLSWT-LCRMIEINDRQGAEDLVKEVKEAKSSEDAQ-RDEYYGRYWPLYKMTQKNDWR-GVEDFVGEHPDALTDKID 165 (770)
Q Consensus 89 ~~~~~~~t-L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~~~~~~g~t~L~~A~~~g~~~-~v~~LL~~~~~~~~~~d~ 165 (770)
.+|..+.+ |+.|+..|+.++++.|++.+.......... ...+..|.||||.|+..++.+ +++ +|...|+++|.+|.
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~-~Ll~~Gadvn~~d~ 84 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLA-KVPASGLGVNVTSQ 84 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC-----------------------------------------CCCCTTCCCT
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHH-HHHHCCCCCCCcCC
Confidence 34556666 999999999999999996543221111111 122345899999999988876 556 55577999999999
Q ss_pred CCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCc
Q 004165 166 GHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTL 245 (770)
Q Consensus 166 ~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~t 245 (770)
+|+||||+ |+. .|+ .++|++|++.| ++++.++..|.||+|.|+..++.+++++|++.|++ ++.+|..|.|
T Consensus 85 ~G~TpLh~-A~~-----~g~-~~~v~~Ll~~~--a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~-~n~~d~~g~T 154 (269)
T 4b93_B 85 DGSSPLHV-AAL-----HGR-ADLIPLLLKHG--ANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAK-PNKKDLSGNT 154 (269)
T ss_dssp TSCCHHHH-HHH-----TTC-TTHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTCCC
T ss_pred CCCCHHHH-HHH-----cCc-HHHHHHHHhcC--CCcCccCCCCCCccccccccChHHHHHHHHHCCCC-CCCCCCCCCC
Confidence 99999999 999 999 99999999999 99999999999999999999999999999999999 8999999999
Q ss_pred HHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCC
Q 004165 246 PVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKP 322 (770)
Q Consensus 246 pL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~ 322 (770)
|||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++++ .+|.+|+||||+|++++
T Consensus 155 pL~~A~~~g~~~~v~~Ll~~gadvn-~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~-~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 155 PLIYACSGGHHELVALLLQHGASIN-ASNNKGNTALHEAVIEKHVFVVELLLLHGASVQ-VLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp HHHHHHHTTCGGGHHHHHHTTCCTT-CBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSC-CCCTTSCCSGGGSCTTC
T ss_pred HHHHHHHCCCHHHHHHHHHCCCCCC-ccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHhCC
Confidence 9999999999999999999999999 599999999999999999999999999999987 89999999999998765
No 31
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=4.1e-33 Score=291.41 Aligned_cols=226 Identities=12% Similarity=0.074 Sum_probs=193.3
Q ss_pred HHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcC
Q 004165 141 TQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKG 220 (770)
Q Consensus 141 ~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g 220 (770)
+...+.+.+..+|... +++.+|..|.||||+ |+. .|+ .+++++|++.| ++++.+| |.||||+|+..|
T Consensus 7 i~~~~~~~v~~lL~~~--~~~~~d~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~g--~~~~~~~--g~t~L~~A~~~g 73 (285)
T 3kea_A 7 INTWKSKQLKSFLSSK--DTFKADVHGHSASYY-AIA-----DNN-VRLVCTLLNAG--ALKNLLE--NEFPLHQAATLE 73 (285)
T ss_dssp GGGCCHHHHHHHHHST--TTTCCCTTSCCHHHH-HHH-----TTC-HHHHHHHHHTT--GGGSCCT--TCCHHHHHTTSS
T ss_pred HHhcCHHHHHHHHHhC--CCCccCCCCCCHHHH-HHH-----cCC-HHHHHHHHhCC--CCCCCCC--CCCHHHHHHHcC
Confidence 3445555555577654 578899999999999 999 999 99999999999 8888774 899999999999
Q ss_pred CHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCC-chHHHHHHHhchHHHHHHHHhh
Q 004165 221 NLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDG-ALVLANLIHARLYDVALDLLKL 299 (770)
Q Consensus 221 ~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-~t~Lh~A~~~~~~~iv~~Ll~~ 299 (770)
+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..| .||||+|+..|+.+++++|+++
T Consensus 74 ~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~ 151 (285)
T 3kea_A 74 DTKIVKILLFSGLD-DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLM-FYGKTGWKTSFYHAVMLNDVSIVSYFLSE 151 (285)
T ss_dssp SCHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGG-GCSSSGGGSHHHHHHHTTCHHHHHHHHTT
T ss_pred CHHHHHHHHHCCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC-ccCCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 99999999999999 89999999999999999999999999999998888 588888 7999999999999999999999
Q ss_pred CCCCcccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCcccccccccccccccccCCCCC
Q 004165 300 HPTIGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDVENLTVTSKIHSKKPT 379 (770)
Q Consensus 300 ~~~~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 379 (770)
+++... .
T Consensus 152 g~~~~~---~---------------------------------------------------------------------- 158 (285)
T 3kea_A 152 IPSTFD---L---------------------------------------------------------------------- 158 (285)
T ss_dssp SCTTCC---C----------------------------------------------------------------------
T ss_pred CCcccc---c----------------------------------------------------------------------
Confidence 865421 0
Q ss_pred CCCCCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccccCCcchHHHHHHHcC
Q 004165 380 PFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPENRDRLLGAMFTAARLG 459 (770)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G 459 (770)
..|.||||.|+..|
T Consensus 159 ------------------------------------------------------------------~~g~t~L~~A~~~g 172 (285)
T 3kea_A 159 ------------------------------------------------------------------AILLSCIHITIKNG 172 (285)
T ss_dssp ------------------------------------------------------------------STHHHHHHHHHHTT
T ss_pred ------------------------------------------------------------------cCCccHHHHHHHcC
Confidence 03567888888889
Q ss_pred cHHHHHHHHHhCCccccccccCCchH-HHHHHhcChhHHHHHHhhcCcccccccccccCCCchhhhhhccCCC
Q 004165 460 IPEFVNEFIMAYDNSAHLFAQDEHRI-FDLAVLHRREKVFNLIHGVNFTTFLFSFRDFLGNNILHLAGRLVPS 531 (770)
Q Consensus 460 ~~eiv~~LL~~~~~~~~~~d~~G~T~-LH~Av~~g~~~iv~~Ll~~~~~~~~~n~~D~~G~T~LHlAa~~g~~ 531 (770)
+.++|++|++.+.+ ++.+|..|+|| ||+|+.+|+.+++++|++.| +++|.+| +.|+..|+.
T Consensus 173 ~~~~v~~Ll~~gad-~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~g---ad~~~~~-------~~a~~~~~~ 234 (285)
T 3kea_A 173 HVDMMILLLDYMTS-TNTNNSLLFIPDIKLAIDNKDIEMLQALFKYD---INIYSAN-------LENVLLDDA 234 (285)
T ss_dssp CHHHHHHHHHHHHH-TCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSC---BCSTTTT-------GGGGTTTCH
T ss_pred hHHHHHHHHHcCCC-CCcccCCCCChHHHHHHHcCCHHHHHHHHHcC---CCCCCCC-------hhhhhcCCH
Confidence 99999999998777 78889999997 99999999999999999988 8888887 456667664
No 32
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=5e-34 Score=304.52 Aligned_cols=286 Identities=12% Similarity=0.036 Sum_probs=205.7
Q ss_pred HhhHHHHhccCCCCCcccchhHH-HHHHHHhcCHHHHHHHHHHHHhccccccccccccCCCCcHHHHHHHcCCHHHHHHH
Q 004165 74 KQTKEAQSSKDAQGNEYYDLSWT-LCRMIEINDRQGAEDLVKEVKEAKSSEDAQRDEYYGRYWPLYKMTQKNDWRGVEDF 152 (770)
Q Consensus 74 ~~~~~~Ll~~g~~~~~~~~~~~t-L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 152 (770)
.+.+++|+++|++++..+..|.+ ++ |+.++++.|++++.. . +.++++.|+......
T Consensus 32 ~dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~------~-------~~~~~~~a~~~~~~~----- 88 (327)
T 1sw6_A 32 HDLTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLF------P-------EIQEMPTSLNNDSSN----- 88 (327)
T ss_dssp TTCCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC----------------------------------
T ss_pred CchHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccC------C-------ccccchHhhhccccc-----
Confidence 56688999999999999999988 44 899999999987752 1 225677776532100
Q ss_pred HhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhcc-ccCCCCcHHHHHHHcCCHHHHHHHHhc
Q 004165 153 VGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALAR-QNRHGRTALHFCAAKGNLKAIKVLMKY 231 (770)
Q Consensus 153 L~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~-~d~~g~T~Lh~A~~~g~~~iv~~Ll~~ 231 (770)
. -........+.+|. |+. .+. .++++.|++.| ++++. +|..|+||||+||..|+.++|++|+++
T Consensus 89 -----~-~~~~~~~~~~~~~~-a~~-----~~~-~~~~~~l~~~g--~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~ 153 (327)
T 1sw6_A 89 -----R-NSEGGSSNQQQQHV-SFD-----SLL-QEVNDAFPNTQ--LNLNIPVDEHGNTPLHWLTSIANLELVKHLVKH 153 (327)
T ss_dssp ----------------------CHH-----HHH-HHHHHHCTTSC--CCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred -----c-cccccCCccchhHH-HHH-----hhH-HHHHHHHHhcC--CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 0 00011112355688 888 888 99999999999 99999 899999999999999999999999999
Q ss_pred CCCCccCCCCCCCcHHHHHHHcCC---hhHHHHHHhhc-CCCCcccCCCCchHHHHHHH----hchHHHHHHHHhhCCCC
Q 004165 232 KPDLTNVRDNEGTLPVQLAALYGH---KDTFQYLLKET-HGVDIYSGNDGALVLANLIH----ARLYDVALDLLKLHPTI 303 (770)
Q Consensus 232 ~~~l~~~~d~~g~tpL~~A~~~g~---~~~v~~Ll~~~-~~~~~~~~~~g~t~Lh~A~~----~~~~~iv~~Ll~~~~~~ 303 (770)
|++ ++.+|..|.||||+|+..|+ .++++.|++.+ ++++ ..+..|+||||+|+. .|+.++++.|++.+..+
T Consensus 154 Gad-~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~-~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~ 231 (327)
T 1sw6_A 154 GSN-RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLI-LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGW 231 (327)
T ss_dssp TCC-TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGG-EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHH
T ss_pred CCC-CCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcccc-CCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHH
Confidence 999 89999999999999999998 78888888887 5566 589999999999999 89999999999986443
Q ss_pred cccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCcccccccccccccccccCCCCCCCCC
Q 004165 304 GRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDVENLTVTSKIHSKKPTPFGS 383 (770)
Q Consensus 304 ~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 383 (770)
... ..+....+.+...
T Consensus 232 ~~~--~~~~~i~~~~~~~-------------------------------------------------------------- 247 (327)
T 1sw6_A 232 IVK--KQNRPIQSGTNEK-------------------------------------------------------------- 247 (327)
T ss_dssp HHH--GGGCCEEEC------------------------------------------------------------------
T ss_pred Hhc--ccchHHHhhhhcc--------------------------------------------------------------
Confidence 210 0000000000000
Q ss_pred CcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccccCCcchHHHHHHHcCcHHH
Q 004165 384 TQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPENRDRLLGAMFTAARLGIPEF 463 (770)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~ei 463 (770)
....+.. ...|.||||.|+.
T Consensus 248 -----------------------------------------------------g~~~~~~-~~~g~t~L~~a~~------ 267 (327)
T 1sw6_A 248 -----------------------------------------------------ESKPNDK-NGERKDSILENLD------ 267 (327)
T ss_dssp ------------------------------------------------------------------CHHHHHCS------
T ss_pred -----------------------------------------------------cCCcccc-cccCCChhHHHHH------
Confidence 0000000 0168899999986
Q ss_pred HHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcCcccccccccccCCCchhhhhhccC
Q 004165 464 VNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVNFTTFLFSFRDFLGNNILHLAGRLV 529 (770)
Q Consensus 464 v~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~~~~~~~n~~D~~G~T~LHlAa~~g 529 (770)
+++|++.. ++.+|.+|+||||+|+++|+.+++++|++.| +++|.+|.+|+||||+|++.|
T Consensus 268 ~~~Ll~~~---~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~G---ad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 268 LKWIIANM---LNAQDSNGDTCLNIAARLGNISIVDALLDYG---ADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHHHHHT---TTCCCTTSCCHHHHHHHHCCHHHHHHHHHTT---CCTTCCCTTSCCGGGGTCC--
T ss_pred HHHHHHhC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC---CCCcccCCCCCCHHHHHHhcC
Confidence 88999883 7789999999999999999999999999998 999999999999999999875
No 33
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=8e-33 Score=279.67 Aligned_cols=225 Identities=16% Similarity=0.097 Sum_probs=164.1
Q ss_pred cCCCchhHHHHHhcCChHHHHHHHHhhHHHHhccCCC-CCcccchhHH-HHHHHHhcCHHHHHHHHHHHHhccccccccc
Q 004165 50 YYGPYCLLYAMIESNDWQGVEDFVKQTKEAQSSKDAQ-GNEYYDLSWT-LCRMIEINDRQGAEDLVKEVKEAKSSEDAQR 127 (770)
Q Consensus 50 ~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~Ll~~g~~-~~~~~~~~~t-L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 127 (770)
..+.||||.|+..++ .+.++.+++.+.+ ++..+..|.| ||+|+..|+.++++.|++.+. ..+
T Consensus 4 ~~~~~~l~~A~~~g~---------~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~----~~~--- 67 (231)
T 3aji_A 4 CVSNIMICNLAYSGK---------LDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGV----PVN--- 67 (231)
T ss_dssp CCSSSHHHHHHHHTC---------HHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC----CSC---
T ss_pred ccccchHHHHHHhCC---------HHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCC----CCC---
Confidence 456788888888888 6666666655443 5556666666 788888888877777774431 111
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccC
Q 004165 128 DEYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNR 207 (770)
Q Consensus 128 ~~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~ 207 (770)
..+..|+||||+|+..|+.+++++|+ +.+.+++.++..|.||||+ |+. .|+ .+++++|++.| ++++.+|.
T Consensus 68 ~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~-A~~-----~~~-~~~~~~Ll~~g--~~~~~~~~ 137 (231)
T 3aji_A 68 DKDDAGWSPLHIAASAGXDEIVKALL-VKGAHVNAVNQNGCTPLHY-AAS-----KNR-HEIAVMLLEGG--ANPDAKDH 137 (231)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCT
T ss_pred CcCCCCCCHHHHHHHcCHHHHHHHHH-HcCCCCCCCCCCCCCHHHH-HHH-----cCC-HHHHHHHHHcC--CCCCCcCC
Confidence 12234777888888888888877655 4467777777777888888 777 777 78888888777 77777777
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHh
Q 004165 208 HGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHA 287 (770)
Q Consensus 208 ~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~ 287 (770)
.|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..
T Consensus 138 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~ 215 (231)
T 3aji_A 138 YDATAMHRAAAKGNLKMVHILLFYKAS-TNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIY-IENKEEKTPLQVAKGG 215 (231)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC-CCCTTSCCHHHHSCHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCC-ccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHhh
Confidence 788888888888888888888887777 67777778888888888888888888888777777 4777788888888777
Q ss_pred chHHHHHHHHhhCCC
Q 004165 288 RLYDVALDLLKLHPT 302 (770)
Q Consensus 288 ~~~~iv~~Ll~~~~~ 302 (770)
++.+++++|++++++
T Consensus 216 ~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 216 LGLILKRLAEGEEAS 230 (231)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcccccc
Confidence 777777777777654
No 34
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.3e-32 Score=279.21 Aligned_cols=232 Identities=13% Similarity=0.051 Sum_probs=200.3
Q ss_pred cccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCC
Q 004165 160 LTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVR 239 (770)
Q Consensus 160 ~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~ 239 (770)
++..|..|.||||. |+. .|+ .+++++|++.| ++++.+|..|.||||+|+..|+.+++++|++.+++.....
T Consensus 2 ~~~~d~~~~~~l~~-A~~-----~g~-~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~ 72 (240)
T 3eu9_A 2 MTHIDDYSTWDIVK-ATQ-----YGI-YERCRELVEAG--YDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLG 72 (240)
T ss_dssp CCCCSCGGGCCHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB
T ss_pred ccccccccchHHHH-HHH-----cCC-hHHHHHHHHcC--CCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhc
Confidence 34567788999999 999 999 99999999999 9999999999999999999999999999999999955566
Q ss_pred CCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHHH
Q 004165 240 DNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLA 319 (770)
Q Consensus 240 d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa 319 (770)
+..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++++++. ..|.+|.||||+|+
T Consensus 73 ~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~-~~~~~g~t~l~~a~ 150 (240)
T 3eu9_A 73 GDLNSTPLHWATRQGHLSMVVQLMKYGADPS-LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD-MMDQNGMTPLMWAA 150 (240)
T ss_dssp TTTTBCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHH
T ss_pred CCcCCChhHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcc-ccCCCCCcHHHHHH
Confidence 6679999999999999999999999999988 589999999999999999999999999999987 88999999999999
Q ss_pred hCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCcccccccccccccccccCCCCCCCCCCcccccccchhhhHhH
Q 004165 320 KKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLH 399 (770)
Q Consensus 320 ~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (770)
..+.. ...++.++
T Consensus 151 ~~~~~------~~~~~~L~------------------------------------------------------------- 163 (240)
T 3eu9_A 151 YRTHS------VDPTRLLL------------------------------------------------------------- 163 (240)
T ss_dssp HHCCS------STTHHHHH-------------------------------------------------------------
T ss_pred HhCCh------HHHHHHHH-------------------------------------------------------------
Confidence 66531 11111111
Q ss_pred HHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccccCCcchHHHHHHHcCcHHHHHHHHHhCCccccccc
Q 004165 400 RMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPENRDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFA 479 (770)
Q Consensus 400 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d 479 (770)
. .....+......|.||||.|+..|+.++|+.|++.+.+ ++.+|
T Consensus 164 --------------------------------~---~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~ 207 (240)
T 3eu9_A 164 --------------------------------T---FNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGAN-VDAQN 207 (240)
T ss_dssp --------------------------------H---TTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCBC
T ss_pred --------------------------------h---cCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcC
Confidence 1 11112222112688999999999999999999999877 78999
Q ss_pred cCCchHHHHHHhcChhHHHHHHhhcC
Q 004165 480 QDEHRIFDLAVLHRREKVFNLIHGVN 505 (770)
Q Consensus 480 ~~G~T~LH~Av~~g~~~iv~~Ll~~~ 505 (770)
..|+||||+|++.|+.+++++|++.+
T Consensus 208 ~~g~t~l~~A~~~~~~~~v~~L~~~~ 233 (240)
T 3eu9_A 208 IKGESALDLAKQRKNVWMINHLQEAR 233 (240)
T ss_dssp TTSCBHHHHHHHTTCHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHhh
Confidence 99999999999999999999999987
No 35
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.2e-32 Score=276.41 Aligned_cols=231 Identities=14% Similarity=0.059 Sum_probs=207.5
Q ss_pred cccccCCCchhHHHHHhcCChHHHHHHHHhhHHHHhccCCCCCcccchhHH-HHHHHHhcCHHHHHHHHHHHHhcccccc
Q 004165 46 QKNEYYGPYCLLYAMIESNDWQGVEDFVKQTKEAQSSKDAQGNEYYDLSWT-LCRMIEINDRQGAEDLVKEVKEAKSSED 124 (770)
Q Consensus 46 ~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~~~t-L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 124 (770)
+..|.+|.||||+|+..++ .+.++.|++.|++++..+..|.| ||+|+..|+.++++.|++.+. +
T Consensus 3 ~~~d~~~~~~l~~A~~~g~---------~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~------~ 67 (240)
T 3eu9_A 3 THIDDYSTWDIVKATQYGI---------YERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGA------I 67 (240)
T ss_dssp CCCSCGGGCCHHHHHHTTC---------HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC------C
T ss_pred cccccccchHHHHHHHcCC---------hHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCC------c
Confidence 4557889999999999999 99999999999999999999988 999999999999999996542 1
Q ss_pred ccccccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhcc
Q 004165 125 AQRDEYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALAR 204 (770)
Q Consensus 125 ~~~~~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~ 204 (770)
........|.||||+|+..|+.+++++|+ +.+.+++.++..|.||||+ |+. .|+ .+++++|++.| ++++.
T Consensus 68 ~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~-A~~-----~~~-~~~~~~Ll~~~--~~~~~ 137 (240)
T 3eu9_A 68 VDQLGGDLNSTPLHWATRQGHLSMVVQLM-KYGADPSLIDGEGCSCIHL-AAQ-----FGH-TSIVAYLIAKG--QDVDM 137 (240)
T ss_dssp TTCCBTTTTBCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTC
T ss_pred chhhcCCcCCChhHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHH-HHH-----cCH-HHHHHHHHhcC--CCccc
Confidence 22222334899999999999999999777 5688999999999999999 999 999 99999999999 89999
Q ss_pred ccCCCCcHHHHHHHcCC-HHHHHHHHhcCCCCccCCCC-CCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHH
Q 004165 205 QNRHGRTALHFCAAKGN-LKAIKVLMKYKPDLTNVRDN-EGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLA 282 (770)
Q Consensus 205 ~d~~g~T~Lh~A~~~g~-~~iv~~Ll~~~~~l~~~~d~-~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh 282 (770)
+|..|.||||+|+..++ .+++++|++.+++ ++..+. .|.||||+|+..|+.+++++|+++|++++ ..+..|.||||
T Consensus 138 ~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~ 215 (240)
T 3eu9_A 138 MDQNGMTPLMWAAYRTHSVDPTRLLLTFNVS-VNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVD-AQNIKGESALD 215 (240)
T ss_dssp CCTTSCCHHHHHHHHCCSSTTHHHHHHTTCC-TTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT-CBCTTSCBHHH
T ss_pred cCCCCCcHHHHHHHhCChHHHHHHHHhcCCC-cchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHH
Confidence 99999999999997666 8999999999999 788886 99999999999999999999999999998 59999999999
Q ss_pred HHHHhchHHHHHHHHhhCCCC
Q 004165 283 NLIHARLYDVALDLLKLHPTI 303 (770)
Q Consensus 283 ~A~~~~~~~iv~~Ll~~~~~~ 303 (770)
+|+..|+.+++++|++.+++.
T Consensus 216 ~A~~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 216 LAKQRKNVWMINHLQEARQAK 236 (240)
T ss_dssp HHHHTTCHHHHHHHHHHC---
T ss_pred HHHHcCcHHHHHHHHHhhhcc
Confidence 999999999999999998764
No 36
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.6e-32 Score=275.89 Aligned_cols=212 Identities=20% Similarity=0.204 Sum_probs=179.5
Q ss_pred CCHHHHHHHHhhCCcccccc-cCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCH
Q 004165 144 NDWRGVEDFVGEHPDALTDK-IDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNL 222 (770)
Q Consensus 144 g~~~~v~~LL~~~~~~~~~~-d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~ 222 (770)
|+.+++++|+.. +.+++.. |..|.||||+ |+. .|+ .+++++|++.| ++++.+|..|.||||+|+..|+.
T Consensus 2 g~~~~i~~Ll~~-g~~~~~~~d~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~ 71 (223)
T 2f8y_A 2 DAPAVISDFIYQ-GASLHNQTDRTGETALHL-AAR-----YSR-SDAAKRLLEAS--ADANIQDNMGRTPLHAAVSADAQ 71 (223)
T ss_dssp ---CCEETTEET-TCCTTCCCTTTCCCHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CcHHHHHHHHHc-CCCcccccCCCCCchHHH-HHH-----cCC-HHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCH
Confidence 667778866644 5555554 7888999999 999 999 99999999999 88899999999999999999999
Q ss_pred HHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCC
Q 004165 223 KAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPT 302 (770)
Q Consensus 223 ~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~ 302 (770)
+++++|++.++..++..+..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|++++++
T Consensus 72 ~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 150 (223)
T 2f8y_A 72 GVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN-AVDDLGKSALHWAAAVNNVDAAVVLLKNGAN 150 (223)
T ss_dssp HHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCc-CcCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999885488899999999999999999999999999988888 5888999999999999999999999999887
Q ss_pred CcccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCcccccccccccccccccCCCCCCCC
Q 004165 303 IGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDVENLTVTSKIHSKKPTPFG 382 (770)
Q Consensus 303 ~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 382 (770)
+. .+|.+
T Consensus 151 ~~-~~~~~------------------------------------------------------------------------ 157 (223)
T 2f8y_A 151 KD-MQNNR------------------------------------------------------------------------ 157 (223)
T ss_dssp TT-CCCTT------------------------------------------------------------------------
T ss_pred CC-CcCCC------------------------------------------------------------------------
Confidence 65 44444
Q ss_pred CCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccccCCcchHHHHHHHcCcHH
Q 004165 383 STQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPENRDRLLGAMFTAARLGIPE 462 (770)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~e 462 (770)
|.||||+|+..|+.+
T Consensus 158 -----------------------------------------------------------------g~t~L~~A~~~~~~~ 172 (223)
T 2f8y_A 158 -----------------------------------------------------------------EETPLFLAAREGSYE 172 (223)
T ss_dssp -----------------------------------------------------------------CCCHHHHHHHHTCHH
T ss_pred -----------------------------------------------------------------CcCHHHHHHHcCCHH
Confidence 445566666778889
Q ss_pred HHHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcC
Q 004165 463 FVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVN 505 (770)
Q Consensus 463 iv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~ 505 (770)
+|+.|++.+.+ ++.+|..|+||||+|+++++.+++++|++.+
T Consensus 173 ~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g 214 (223)
T 2f8y_A 173 TAKVLLDHFAN-RDITDHMDRLPRDIAQERMHHDIVRLLDEYN 214 (223)
T ss_dssp HHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHcCCC-CccccccCCCHHHHHHHhcchHHHHHHHHcC
Confidence 99999998877 6788999999999999999999999999988
No 37
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=8.5e-33 Score=289.01 Aligned_cols=187 Identities=16% Similarity=0.078 Sum_probs=159.4
Q ss_pred hcCHHHHHHHHHHHHhccccccccccccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhcccccc
Q 004165 103 INDRQGAEDLVKEVKEAKSSEDAQRDEYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVE 182 (770)
Q Consensus 103 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~ 182 (770)
..+.+.+..++.. .+.+ ..+..|.||||+|+..|+.++++.|+. .+.+++.++ |+||||+ |+.
T Consensus 9 ~~~~~~v~~lL~~-------~~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~--g~t~L~~-A~~----- 71 (285)
T 3kea_A 9 TWKSKQLKSFLSS-------KDTF-KADVHGHSASYYAIADNNVRLVCTLLN-AGALKNLLE--NEFPLHQ-AAT----- 71 (285)
T ss_dssp GCCHHHHHHHHHS-------TTTT-CCCTTSCCHHHHHHHTTCHHHHHHHHH-TTGGGSCCT--TCCHHHH-HTT-----
T ss_pred hcCHHHHHHHHHh-------CCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHh-CCCCCCCCC--CCCHHHH-HHH-----
Confidence 4455555555532 1222 234569999999999999999997775 588888874 8999999 999
Q ss_pred CCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCC-CcHHHHHHHcCChhHHHH
Q 004165 183 SDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEG-TLPVQLAALYGHKDTFQY 261 (770)
Q Consensus 183 ~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g-~tpL~~A~~~g~~~~v~~ 261 (770)
.|+ .+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..| .||||+|+..|+.+++++
T Consensus 72 ~g~-~~~v~~Ll~~g--a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~~t~L~~A~~~~~~~~v~~ 147 (285)
T 3kea_A 72 LED-TKIVKILLFSG--LDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVMLNDVSIVSY 147 (285)
T ss_dssp SSS-CHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGG-GGGCSSSGGGSHHHHHHHTTCHHHHHH
T ss_pred cCC-HHHHHHHHHCC--CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC-CCccCCCCCCCHHHHHHHcCCHHHHHH
Confidence 999 99999999999 99999999999999999999999999999999999 89999999 899999999999999999
Q ss_pred HHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCC
Q 004165 262 LLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSRRI 313 (770)
Q Consensus 262 Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~t 313 (770)
|+++|++.. ....|.||||+|+..|+.+++++|+++|++++ .+|.+|.|
T Consensus 148 Ll~~g~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n-~~~~~g~t 196 (285)
T 3kea_A 148 FLSEIPSTF--DLAILLSCIHITIKNGHVDMMILLLDYMTSTN-TNNSLLFI 196 (285)
T ss_dssp HHTTSCTTC--CCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-TTCCCBCC
T ss_pred HHhCCCccc--cccCCccHHHHHHHcChHHHHHHHHHcCCCCC-cccCCCCC
Confidence 999987663 23389999999999999999999999988876 45544444
No 38
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-32 Score=289.82 Aligned_cols=279 Identities=13% Similarity=0.109 Sum_probs=204.5
Q ss_pred HHHHhcCHHHHHHHHHHHHhcccc--ccccccccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHh
Q 004165 99 RMIEINDRQGAEDLVKEVKEAKSS--EDAQRDEYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAM 176 (770)
Q Consensus 99 ~A~~~g~~~~v~~Ll~~~~~~~~~--~~~~~~~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~ 176 (770)
.++..+..+.+..++......... .......+..|.||||.||..|+.++|+.|+.. +.+++..|..|.||||+ |+
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~-A~ 81 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLER-GADINYANVDGLTALHQ-AC 81 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHH-CCCTTCBCTTCCBHHHH-HH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHH-HH
Confidence 456677777777777544321111 111122234578999999999999999988854 78899999999999999 99
Q ss_pred ccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCCh
Q 004165 177 LLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHK 256 (770)
Q Consensus 177 ~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~ 256 (770)
. .|+ .+++++|++.| ++++.+|..|.||||+|+..|+.+++++|+++|++ ++..|..|.||||+|+..|+.
T Consensus 82 ~-----~g~-~~~v~~Ll~~g--a~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~ 152 (299)
T 1s70_B 82 I-----DDN-VDMVKFLVENG--ANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAH-VGAVNSEGDTPLDIAEEEAME 152 (299)
T ss_dssp H-----TTC-HHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCCSHHHH
T ss_pred H-----cCC-HHHHHHHHHCC--CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHhcchH
Confidence 9 999 99999999999 99999999999999999999999999999999999 899999999999999999999
Q ss_pred hHHHHHHhhc-CCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCCCcccCCCcchhhh
Q 004165 257 DTFQYLLKET-HGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQ 335 (770)
Q Consensus 257 ~~v~~Ll~~~-~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~ 335 (770)
++++.++... .+.+ ..+..+.++++ ..+..++..+.......+..|.||||+|+..++ ...+
T Consensus 153 ~~~~~ll~~~~~~~~-~~~~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~-------~~~v- 215 (299)
T 1s70_B 153 ELLQNEVNRQGVDIE-AARKEEERIML--------RDARQWLNSGHINDVRHAKSGGTALHVAAAKGY-------TEVL- 215 (299)
T ss_dssp HHHHHHHHHHTCCHH-HHHHHHHHHHH--------HHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTC-------HHHH-
T ss_pred HHHHHHHhhcCCCch-hhhhhhhhHHH--------HHHHHHHhccCcchhhhcCCCCCHHHHHHHCCc-------HHHH-
Confidence 9999888653 2222 12222222222 334445555555554566677777777776652 1111
Q ss_pred HHHhhccccccccCCCCCCCCCcccccccccccccccccCCCCCCCCCCcccccccchhhhHhHHHHHHHHhhcCCchHH
Q 004165 336 RLIYNCIPARKELVPSIQTNDDETVDRDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKV 415 (770)
Q Consensus 336 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 415 (770)
T Consensus 216 -------------------------------------------------------------------------------- 215 (299)
T 1s70_B 216 -------------------------------------------------------------------------------- 215 (299)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhhhHHHHHHHHHHhhccccCCccccCCcchHHHHHHHcCcHHHHHHHHHhCCccccccccCCchHHHHHHhcChh
Q 004165 416 IHDQKLTHMRTVEIVRIICQGVIWTNPENRDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRRE 495 (770)
Q Consensus 416 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~ 495 (770)
+ .+++.....+..+ ..|.||||+|+..|+.++|+.|++.+.+ ++.+|..|+||||+|++...
T Consensus 216 ------------~---~Ll~~g~d~~~~d-~~g~tpL~~A~~~~~~~~v~~Ll~~gad-~~~~d~~g~t~l~~A~~~~~- 277 (299)
T 1s70_B 216 ------------K---LLIQARYDVNIKD-YDGWTPLHAAAHWGKEEACRILVENLCD-MEAVNKVGQTAFDVADEDIL- 277 (299)
T ss_dssp ------------H---HHHTTTCCTTCCC-TTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCTTTSCCSGGG-
T ss_pred ------------H---HHHHcCCCCCCcC-CCCCcHHHHHHhcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHHHH-
Confidence 1 1111111111111 2678889999999999999999999887 78999999999999987554
Q ss_pred HHHHHHhh
Q 004165 496 KVFNLIHG 503 (770)
Q Consensus 496 ~iv~~Ll~ 503 (770)
+.++.+++
T Consensus 278 ~~l~~l~~ 285 (299)
T 1s70_B 278 GYLEELQK 285 (299)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444443
No 39
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.98 E-value=1.3e-31 Score=269.28 Aligned_cols=213 Identities=17% Similarity=0.119 Sum_probs=193.9
Q ss_pred HhhHHHHhccCCCCCcc-cchhHH-HHHHHHhcCHHHHHHHHHHHHhccccccccccccCCCCcHHHHHHHcCCHHHHHH
Q 004165 74 KQTKEAQSSKDAQGNEY-YDLSWT-LCRMIEINDRQGAEDLVKEVKEAKSSEDAQRDEYYGRYWPLYKMTQKNDWRGVED 151 (770)
Q Consensus 74 ~~~~~~Ll~~g~~~~~~-~~~~~t-L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 151 (770)
.+.+++|+++|++++.. |..|.| ||+|+..|+.++++.|++.+. ..+ ..+..|.||||+|+..|+.+++++
T Consensus 4 ~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~----~~~---~~~~~g~t~L~~A~~~~~~~~v~~ 76 (223)
T 2f8y_A 4 PAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA----DAN---IQDNMGRTPLHAAVSADAQGVFQI 76 (223)
T ss_dssp -CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC----CTT---CCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCC----CCC---CcCCCCCCHHHHHHHcCCHHHHHH
Confidence 56778899999999876 778888 999999999999999996532 111 123459999999999999999999
Q ss_pred HHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhc
Q 004165 152 FVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKY 231 (770)
Q Consensus 152 LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~ 231 (770)
|+...+.+++.++..|.||||+ |+. .|+ .+++++|++.| ++++.+|..|.||||+|+..|+.+++++|++.
T Consensus 77 Ll~~~~~~~~~~~~~g~t~L~~-A~~-----~~~-~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 147 (223)
T 2f8y_A 77 LIRNRATDLDARMHDGTTPLIL-AAR-----LAV-EGMLEDLINSH--ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN 147 (223)
T ss_dssp HHHBTTSCTTCCCTTCCCHHHH-HHH-----HTC-HHHHHHHHHTT--CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHcCCCCcccCCCCCCcHHHH-HHH-----hCc-HHHHHHHHHcC--CCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 9988777999999999999999 999 999 99999999999 99999999999999999999999999999999
Q ss_pred CCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCc
Q 004165 232 KPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIG 304 (770)
Q Consensus 232 ~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~ 304 (770)
|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..++.+++++|+++|+...
T Consensus 148 g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 148 GAN-KDMQNNREETPLFLAAREGSYETAKVLLDHFANRD-ITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp TCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred CCC-CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc-cccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 999 89999999999999999999999999999999998 599999999999999999999999999987653
No 40
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=6.8e-31 Score=265.74 Aligned_cols=161 Identities=20% Similarity=0.214 Sum_probs=146.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhh-----ccccC
Q 004165 133 RYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEAL-----ARQNR 207 (770)
Q Consensus 133 g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~-----~~~d~ 207 (770)
|+||||+|+..|+.++++.|+...+.+++.+|..|+||||+ |+. .|+ .+++++|++.| +++ +.+|.
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~~--~~~~~~~~~~~~~ 73 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHI-AAL-----YDN-LEAAMVLMEAA--PELVFEPMTSELY 73 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHH-HHH-----TTC-HHHHHHHHHHC--GGGGGCCCCSTTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHH-HHH-----cCC-HHHHHHHHHcC--chhccccccccCC
Confidence 88999999999999999999987799999999999999999 999 999 99999999999 665 66788
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCC-------------CCCcHHHHHHHcCChhHHHHHHhhcCCCCcccC
Q 004165 208 HGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDN-------------EGTLPVQLAALYGHKDTFQYLLKETHGVDIYSG 274 (770)
Q Consensus 208 ~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~-------------~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 274 (770)
.|.||||+|+..|+.+++++|+++|++ ++..+. .|.||||+|+..|+.+++++|+++|++++ ..|
T Consensus 74 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d 151 (232)
T 2rfa_A 74 EGQTALHIAVINQNVNLVRALLARGAS-VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR-AQD 151 (232)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT-CCC
T ss_pred CCcCHHHHHHHcCCHHHHHHHHhCCCC-CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCC
Confidence 999999999999999999999999998 677765 79999999999999999999999998888 589
Q ss_pred CCCchHHHHHHHhchHHHH----HHHHhhCCCCc
Q 004165 275 NDGALVLANLIHARLYDVA----LDLLKLHPTIG 304 (770)
Q Consensus 275 ~~g~t~Lh~A~~~~~~~iv----~~Ll~~~~~~~ 304 (770)
.+|.||||+|+..|+.+++ ++|++.+++..
T Consensus 152 ~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 152 SLGNTVLHILILQPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp TTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCS
T ss_pred CCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchh
Confidence 9999999999999998887 88888887653
No 41
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=2.6e-32 Score=277.04 Aligned_cols=222 Identities=15% Similarity=0.155 Sum_probs=185.1
Q ss_pred ccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCCh--hhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccC
Q 004165 161 TDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVP--EALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNV 238 (770)
Q Consensus 161 ~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~--~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~ 238 (770)
+.+|.+|.||||+ |+. .|+ .+++++|++.+.. ++++.+|..|.||||+|+..|+.+++++|++.|++ ++.
T Consensus 2 ~~~d~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~ 73 (236)
T 1ikn_D 2 QQLTEDGDSFLHL-AII-----HEE-KALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD-PEL 73 (236)
T ss_dssp -----CCCCTTHH-HHH-----TTC-SSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC-SCC
T ss_pred CcCCCCCCchhHH-HHH-----cCC-hhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCC
Confidence 3567889999999 999 999 9999999998721 26899999999999999999999999999999999 899
Q ss_pred CCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCc-----ccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCC-CCC
Q 004165 239 RDNEGTLPVQLAALYGHKDTFQYLLKETHGVDI-----YSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNID-SRR 312 (770)
Q Consensus 239 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~-----~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~-~g~ 312 (770)
+|..|.||||+|+..|+.+++++|++.+++... ..+..|.||||+|+..|+.+++++|+++|++++ .++. +
T Consensus 74 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~~-- 150 (236)
T 1ikn_D 74 RDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN-AQEPCN-- 150 (236)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTT--
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCC--
Confidence 999999999999999999999999999876321 578889999999999999999999999998876 3332 3
Q ss_pred CHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCcccccccccccccccccCCCCCCCCCCcccccccc
Q 004165 313 IVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDVENLTVTSKIHSKKPTPFGSTQQIPTTYG 392 (770)
Q Consensus 313 tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 392 (770)
T Consensus 151 -------------------------------------------------------------------------------- 150 (236)
T 1ikn_D 151 -------------------------------------------------------------------------------- 150 (236)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccccCCcchHHHHHHHcCcHHHHHHHHHhCC
Q 004165 393 AMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPENRDRLLGAMFTAARLGIPEFVNEFIMAYD 472 (770)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~ 472 (770)
|.||||+|+..|+.++|++|++.+.
T Consensus 151 -------------------------------------------------------g~tpL~~A~~~~~~~~v~~Ll~~ga 175 (236)
T 1ikn_D 151 -------------------------------------------------------GRTALHLAVDLQNPDLVSLLLKCGA 175 (236)
T ss_dssp -------------------------------------------------------CCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred -------------------------------------------------------CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 4556666777788999999999987
Q ss_pred ccccccccCCchHHHHHHhcChhHHHHHHhhcCcccccccccccCCCchhhhhhccCC
Q 004165 473 NSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVNFTTFLFSFRDFLGNNILHLAGRLVP 530 (770)
Q Consensus 473 ~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~~~~~~~n~~D~~G~T~LHlAa~~g~ 530 (770)
+ ++.+|..|+||||+|+.+|+.+++++|++.| .......++.+|.||.+.+.....
T Consensus 176 ~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~~~ 231 (236)
T 1ikn_D 176 D-VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLT-LENLQMLPESEDEESYDTESEFTE 231 (236)
T ss_dssp C-SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTS-CGGGSSCCCCCTTTCCCCC-----
T ss_pred C-CCcccCCCCCHHHHHHccCchHHHHHHHHcc-hhhhhcCCccchHHHHhhhccccc
Confidence 7 7899999999999999999999999999998 122345899999999999877654
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=1.3e-30 Score=263.75 Aligned_cols=146 Identities=21% Similarity=0.217 Sum_probs=132.2
Q ss_pred CCCCHHHHHHhccccccCCchHHHHHHHHHc-CChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCc----cCCC
Q 004165 166 GHKTIFHLIAMLLVDVESDEGTCLVDNLASI-VVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLT----NVRD 240 (770)
Q Consensus 166 ~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~-~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~----~~~d 240 (770)
.|+||||+ |+. .|+ .++++.|++. | ++++.+|..|+||||+|+..|+.+++++|++.+++.. +..|
T Consensus 2 ~g~t~L~~-A~~-----~g~-~~~v~~Ll~~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~ 72 (232)
T 2rfa_A 2 IWESPLLL-AAK-----END-VQALSKLLKFEG--CEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSEL 72 (232)
T ss_dssp CTTCHHHH-HHH-----TTC-HHHHHHHHTTTC--SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTT
T ss_pred CCCCHHHH-HHH-----cCC-HHHHHHHHHhcC--CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccC
Confidence 47899999 999 999 9999999998 7 9999999999999999999999999999999998832 6678
Q ss_pred CCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCC-------------CCchHHHHHHHhchHHHHHHHHhhCCCCcccC
Q 004165 241 NEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGN-------------DGALVLANLIHARLYDVALDLLKLHPTIGRDN 307 (770)
Q Consensus 241 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-------------~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~ 307 (770)
..|.||||+|+..|+.+++++|+++|++++. .+. .|.||||+|+..|+.+++++|+++|++++ .+
T Consensus 73 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~ 150 (232)
T 2rfa_A 73 YEGQTALHIAVINQNVNLVRALLARGASVSA-RATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR-AQ 150 (232)
T ss_dssp TTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT-CC
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHhCCCCCCc-ccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CC
Confidence 8999999999999999999999999998874 443 79999999999999999999999999987 77
Q ss_pred CCCCCCHHHHHHhCC
Q 004165 308 IDSRRIVLKTLAKKP 322 (770)
Q Consensus 308 d~~g~tpL~~Aa~~~ 322 (770)
|.+|+||||+|+..+
T Consensus 151 d~~g~t~L~~A~~~~ 165 (232)
T 2rfa_A 151 DSLGNTVLHILILQP 165 (232)
T ss_dssp CTTSCCHHHHHHTCS
T ss_pred CCCCCCHHHHHHHcC
Confidence 888888777777654
No 43
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=3.4e-30 Score=246.21 Aligned_cols=158 Identities=24% Similarity=0.293 Sum_probs=147.6
Q ss_pred cHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHH
Q 004165 135 WPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALH 214 (770)
Q Consensus 135 t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh 214 (770)
++|+.||+.|+.++|+.|| +.|+++|.+|..|+||||+ |+. .++ .+++++|++.| ++++.+|..|+||||
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll-~~Gadvn~~d~~g~t~l~~-a~~-----~~~-~~~~~~ll~~g--ad~~~~d~~g~TpLh 75 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLI-ENGADVNASDSDGRTPLHH-AAE-----NGH-KEVVKLLISKG--ADVNAKDSDGRTPLH 75 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCTTSCCHHH
T ss_pred HHHHHHHHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHH-HHH-----cCC-HHHHHHHHhcc--cchhhhccCCCCHHH
Confidence 4799999999999999777 5689999999999999999 999 999 99999999999 999999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHH
Q 004165 215 FCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVAL 294 (770)
Q Consensus 215 ~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~ 294 (770)
+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.+++++|++.|++++ ..|.+|+||||+|+..|+.++++
T Consensus 76 ~A~~~g~~~~v~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~G~TpL~~A~~~g~~~iv~ 153 (169)
T 4gpm_A 76 HAAENGHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVN-TSDSDGRTPLDLAREHGNEEVVK 153 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHH
Confidence 99999999999999999999 89999999999999999999999999999999999 59999999999999999999999
Q ss_pred HHHhhCCCCc
Q 004165 295 DLLKLHPTIG 304 (770)
Q Consensus 295 ~Ll~~~~~~~ 304 (770)
+|+++|+++.
T Consensus 154 ~Ll~~GA~ie 163 (169)
T 4gpm_A 154 LLEKQGGWLE 163 (169)
T ss_dssp HHHTC-----
T ss_pred HHHHCCCCcC
Confidence 9999999875
No 44
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=3.8e-31 Score=282.16 Aligned_cols=240 Identities=12% Similarity=-0.036 Sum_probs=181.8
Q ss_pred hhhccccccCCCchhHHHHHhcCChHHHHHHHHhhHHHHhccCCCCCcccc--------------hhHH----HHHHHHh
Q 004165 42 SKDAQKNEYYGPYCLLYAMIESNDWQGVEDFVKQTKEAQSSKDAQGNEYYD--------------LSWT----LCRMIEI 103 (770)
Q Consensus 42 ~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~--------------~~~t----L~~A~~~ 103 (770)
..+++..|..|.|+++ ++ .+.++.|+++|++.+.... .+.+ +|.|+..
T Consensus 42 ga~i~~~~~~g~~~~~-----g~---------~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~ 107 (327)
T 1sw6_A 42 PLKIMKALPSPVVNDN-----EQ---------KMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDS 107 (327)
T ss_dssp SCCCEECBCCCCCCCH-----HH---------HHHHHHHHHHHHC-------------------------------CHHH
T ss_pred CcccccCCCCCCcccC-----ch---------hHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHh
Confidence 4567888899999988 77 8889999999988665210 1111 3555544
Q ss_pred cCHHHHHHHHHHHHhcccccccccc--ccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccc
Q 004165 104 NDRQGAEDLVKEVKEAKSSEDAQRD--EYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDV 181 (770)
Q Consensus 104 g~~~~v~~Ll~~~~~~~~~~~~~~~--~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~ 181 (770)
+..++++.|+ ..+.+.+ .+..|+||||+||..|+.++|+.|| +.|++++.+|..|+||||+ |+.
T Consensus 108 ~~~~~~~~l~--------~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll-~~Gad~n~~d~~g~TpLh~-A~~---- 173 (327)
T 1sw6_A 108 LLQEVNDAFP--------NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLV-KHGSNRLYGDNMGESCLVK-AVK---- 173 (327)
T ss_dssp HHHHHHHHCT--------TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTBCCTTCCCHHHH-HHH----
T ss_pred hHHHHHHHHH--------hcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHH-HHH----
Confidence 4444444444 3333333 3456999999999999999999777 5589999999999999999 999
Q ss_pred cCCch--HHHHHHHHHcCChhhhccccCCCCcHHHHHHH----cCCHHHHHHHHhc--------------------CCCC
Q 004165 182 ESDEG--TCLVDNLASIVVPEALARQNRHGRTALHFCAA----KGNLKAIKVLMKY--------------------KPDL 235 (770)
Q Consensus 182 ~~g~~--~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~----~g~~~iv~~Ll~~--------------------~~~l 235 (770)
.|+. .++++.|++.+ .++++.+|..|+||||+|+. .|+.+++++|++. +++
T Consensus 174 -~g~~~~~~~~~~ll~~~-~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~- 250 (327)
T 1sw6_A 174 -SVNNYDSGTFEALLDYL-YPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESK- 250 (327)
T ss_dssp -SSHHHHTTCHHHHHHHH-GGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC--------
T ss_pred -hcccccHHHHHHHHHhh-hccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCC-
Confidence 8761 37888999887 36799999999999999999 9999999999987 777
Q ss_pred ccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHH
Q 004165 236 TNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVL 315 (770)
Q Consensus 236 ~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL 315 (770)
++.+|..|.||||.|+. +++|+++ +++ .+|.+|+||||+|+..|+.+++++|+++|+++. .+|.+|+|||
T Consensus 251 ~~~~~~~g~t~L~~a~~------~~~Ll~~--~~n-~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~-~~d~~G~TpL 320 (327)
T 1sw6_A 251 PNDKNGERKDSILENLD------LKWIIAN--MLN-AQDSNGDTCLNIAARLGNISIVDALLDYGADPF-IANKSGLRPV 320 (327)
T ss_dssp ---------CHHHHHCS------HHHHHHH--TTT-CCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTT-CCCTTSCCGG
T ss_pred cccccccCCChhHHHHH------HHHHHHh--CCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHH
Confidence 89999999999999985 9999998 577 589999999999999999999999999999987 8999999999
Q ss_pred HHHHhCC
Q 004165 316 KTLAKKP 322 (770)
Q Consensus 316 ~~Aa~~~ 322 (770)
|+|++++
T Consensus 321 ~~A~~~g 327 (327)
T 1sw6_A 321 DFGAGLE 327 (327)
T ss_dssp GGTCC--
T ss_pred HHHHhcC
Confidence 9998754
No 45
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=7.7e-30 Score=251.78 Aligned_cols=197 Identities=15% Similarity=0.114 Sum_probs=175.7
Q ss_pred CCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCC
Q 004165 165 DGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGT 244 (770)
Q Consensus 165 ~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~ 244 (770)
..+.||||. |+. .|+ .+.++.|++.+ +.+++.+|..|.||||+|+..|+.+++++|++.|++ ++.+|..|.
T Consensus 3 ~~~~~~L~~-A~~-----~g~-~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~ 73 (201)
T 3hra_A 3 TYEVGALLE-AAN-----QRD-TKKVKEILQDT-TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD-INLQNSISD 73 (201)
T ss_dssp CCCTTHHHH-HHH-----TTC-HHHHHHHHTCT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSC
T ss_pred cccccHHHH-HHH-----hcc-HHHHHHHHHcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCC
Confidence 457899999 999 999 99999999998 358999999999999999999999999999999999 899999999
Q ss_pred cHHHHHHHcCChhHHHHHHhh-cCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhC-CCCcccCCCCCCCHHHHHHhCC
Q 004165 245 LPVQLAALYGHKDTFQYLLKE-THGVDIYSGNDGALVLANLIHARLYDVALDLLKLH-PTIGRDNIDSRRIVLKTLAKKP 322 (770)
Q Consensus 245 tpL~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~-~~~~~~~d~~g~tpL~~Aa~~~ 322 (770)
||||+|+..|+.+++++|++. +++.+ ..+..|.||||+|+..|+.+++++|++++ .++. .+|.+|.||||+|+..+
T Consensus 74 t~l~~A~~~~~~~~~~~Ll~~~~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~~g~t~L~~A~~~~ 151 (201)
T 3hra_A 74 SPYLYAGAQGRTEILAYMLKHATPDLN-KHNRYGGNALIPAAEKGHIDNVKLLLEDGREDID-FQNDFGYTALIEAVGLR 151 (201)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSCCCTT-CCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTT-CCCTTSCCHHHHHHHSS
T ss_pred CHHHHHHHcCCHHHHHHHHhccCcccc-cccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcC-CCCCCCCCHHHHHHHhc
Confidence 999999999999999999954 45666 58999999999999999999999999999 5554 78888888888888765
Q ss_pred CcccCCCcchhhhHHHhhccccccccCCCCCCCCCcccccccccccccccccCCCCCCCCCCcccccccchhhhHhHHHH
Q 004165 323 YAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRML 402 (770)
Q Consensus 323 ~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (770)
+.
T Consensus 152 ~~------------------------------------------------------------------------------ 153 (201)
T 3hra_A 152 EG------------------------------------------------------------------------------ 153 (201)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 21
Q ss_pred HHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccccCCcchHHHHHHHcCcHHHHHHHHHhCCccccccccCC
Q 004165 403 WNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPENRDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQDE 482 (770)
Q Consensus 403 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G 482 (770)
..++.++++.|++.+.+ ++.+|..|
T Consensus 154 ------------------------------------------------------~~~~~~~v~~Ll~~ga~-~~~~~~~g 178 (201)
T 3hra_A 154 ------------------------------------------------------NQLYQDIVKLLMENGAD-QSIKDNSG 178 (201)
T ss_dssp ------------------------------------------------------SHHHHHHHHHHHHTTCC-TTCCCTTS
T ss_pred ------------------------------------------------------hhhHHHHHHHHHHCCCC-CCccCCCC
Confidence 01347899999999877 78899999
Q ss_pred chHHHHHHhcChhHHHHHHhhcC
Q 004165 483 HRIFDLAVLHRREKVFNLIHGVN 505 (770)
Q Consensus 483 ~T~LH~Av~~g~~~iv~~Ll~~~ 505 (770)
+||||+|+++|+.+++++|++.|
T Consensus 179 ~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 179 RTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCHHHHHHHcCCHhHHHHHHhcC
Confidence 99999999999999999999865
No 46
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=1e-29 Score=250.95 Aligned_cols=180 Identities=16% Similarity=0.185 Sum_probs=154.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCc
Q 004165 132 GRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRT 211 (770)
Q Consensus 132 ~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T 211 (770)
.+.||||.|+..|+.+.++.|+...+.+++..|..|.||||+ |+. .|+ .+++++|++.| ++++.+|..|.|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-A~~-----~~~-~~~v~~Ll~~g--~~~~~~~~~g~t 74 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNI-AVH-----NND-IEIAKALIDRG--ADINLQNSISDS 74 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHH-HHH-----HTC-HHHHHHHHHTT--CCTTCCCTTSCC
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHH-HHH-----cCC-HHHHHHHHHcC--CCCCCCCCCCCC
Confidence 377899999999999999989888777899999999999999 999 999 99999999998 888999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhc-CCCCcccCCCCchHHHHHHHhch-
Q 004165 212 ALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKET-HGVDIYSGNDGALVLANLIHARL- 289 (770)
Q Consensus 212 ~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~g~t~Lh~A~~~~~- 289 (770)
|||+|+..|+.+++++|++.+...++..|..|.||||+|+..|+.+++++|++.| ++++ ..+..|.||||+|+..++
T Consensus 75 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~~g~t~L~~A~~~~~~ 153 (201)
T 3hra_A 75 PYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDID-FQNDFGYTALIEAVGLREG 153 (201)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTT-CCCTTSCCHHHHHHHSSCC
T ss_pred HHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcC-CCCCCCCCHHHHHHHhccc
Confidence 9999999999999999995544338889999999999999999999999999998 7777 588899999999998887
Q ss_pred ----HHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCC
Q 004165 290 ----YDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKP 322 (770)
Q Consensus 290 ----~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~ 322 (770)
.+++++|+++|+++. .+|.+|.||||+|+..+
T Consensus 154 ~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~ 189 (201)
T 3hra_A 154 NQLYQDIVKLLMENGADQS-IKDNSGRTAMDYANQKG 189 (201)
T ss_dssp SHHHHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHT
T ss_pred hhhHHHHHHHHHHCCCCCC-ccCCCCCCHHHHHHHcC
Confidence 899999999988876 66766666666665443
No 47
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=1e-30 Score=265.18 Aligned_cols=220 Identities=17% Similarity=0.056 Sum_probs=180.6
Q ss_pred ccccCCCchhHHHHHhcCChHHHHHHHHhhHHHHhccCCCCCcccchhHHHHHHHHhcCHHHHHHHHHHHHhcccccccc
Q 004165 47 KNEYYGPYCLLYAMIESNDWQGVEDFVKQTKEAQSSKDAQGNEYYDLSWTLCRMIEINDRQGAEDLVKEVKEAKSSEDAQ 126 (770)
Q Consensus 47 ~~d~~g~t~Lh~A~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~~~tL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~ 126 (770)
..|.+|.||||+|+..++ .+.++.|++.+..... ..+
T Consensus 3 ~~d~~g~t~L~~A~~~g~---------~~~v~~Ll~~~~~~~~--------------------------------~~~-- 39 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEE---------KALTMEVIRQVKGDLA--------------------------------FLN-- 39 (236)
T ss_dssp ----CCCCTTHHHHHTTC---------SSSSSCCCC-----CC--------------------------------CCC--
T ss_pred cCCCCCCchhHHHHHcCC---------hhHHHHHHHHhhccHH--------------------------------Hhh--
Confidence 457788999999999888 7777777665442100 011
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCCh----hhh
Q 004165 127 RDEYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVP----EAL 202 (770)
Q Consensus 127 ~~~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~----~~~ 202 (770)
..+..|.||||+|+..|+.+++++|+ +.+.+++.+|..|.||||+ |+. .|+ .+++++|++.|.+ ..+
T Consensus 40 -~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~-A~~-----~~~-~~~v~~Ll~~~~~~~~~~~~ 110 (236)
T 1ikn_D 40 -FQNNLQQTPLHLAVITNQPEIAEALL-GAGCDPELRDFRGNTPLHL-ACE-----QGC-LASVGVLTQSCTTPHLHSIL 110 (236)
T ss_dssp -CCCTTCCCHHHHHHHTTCHHHHHCCC-SCCCCSCCCCTTCCCHHHH-HHH-----HTC-HHHHHHHHHSTTTTSSSCGG
T ss_pred -ccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHH-HHH-----cCC-HHHHHHHHhcccchhHHHHh
Confidence 11234889999999999999999666 5789999999999999999 999 999 9999999999821 226
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCC-CCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHH
Q 004165 203 ARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDN-EGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVL 281 (770)
Q Consensus 203 ~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~-~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 281 (770)
+..|..|.||||+|+..|+.+++++|++.|++ ++.++. .|.||||+|+..|+.+++++|+++|++++ ..+..|.|||
T Consensus 111 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpl 188 (236)
T 1ikn_D 111 KATNYNGHTCLHLASIHGYLGIVELLVSLGAD-VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN-RVTYQGYSPY 188 (236)
T ss_dssp GCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSC-CCCTTCCCGG
T ss_pred hccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-cccCCCCCHH
Confidence 77888999999999999999999999999999 888887 99999999999999999999999999998 5999999999
Q ss_pred HHHHHhchHHHHHHHHhhCCCCc-ccCCCCCCCHHHHHHh
Q 004165 282 ANLIHARLYDVALDLLKLHPTIG-RDNIDSRRIVLKTLAK 320 (770)
Q Consensus 282 h~A~~~~~~~iv~~Ll~~~~~~~-~~~d~~g~tpL~~Aa~ 320 (770)
|+|+..|+.+++++|+++|++.. ...+..|.||.+.+..
T Consensus 189 ~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 189 QLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp GGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC--
T ss_pred HHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhcc
Confidence 99999999999999999998654 4677888888775543
No 48
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=2.4e-30 Score=268.73 Aligned_cols=222 Identities=14% Similarity=0.078 Sum_probs=175.1
Q ss_pred cCCCCCcccchhHH-HHHHHHhcCHHHHHHHHHHHHhcccccc-ccccccCCCCcHHHHHHHc---CCHHHHHHHHhhCC
Q 004165 83 KDAQGNEYYDLSWT-LCRMIEINDRQGAEDLVKEVKEAKSSED-AQRDEYYGRYWPLYKMTQK---NDWRGVEDFVGEHP 157 (770)
Q Consensus 83 ~g~~~~~~~~~~~t-L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~~~~~~~g~t~L~~A~~~---g~~~~v~~LL~~~~ 157 (770)
.++..+..|..|.| ||+|+..|+.+.++.|++.+...+.... .....+..|+||||+|+.. |+.++++.|+.. +
T Consensus 2 ~~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~-g 80 (273)
T 2pnn_A 2 VSAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDV-A 80 (273)
T ss_dssp ---------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHH-H
T ss_pred CcccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHh-h
Confidence 45667778888888 9999999999999999998865443322 1112345699999999987 999999988865 3
Q ss_pred cc-------cc----cccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccC--------------CCCcH
Q 004165 158 DA-------LT----DKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNR--------------HGRTA 212 (770)
Q Consensus 158 ~~-------~~----~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~--------------~g~T~ 212 (770)
++ ++ ..|..|.||||+ |+. .|+ .++|++|+++| ++++.++. .|.||
T Consensus 81 a~~~~~~~~i~~~~~~~d~~g~tpL~~-A~~-----~g~-~~~v~~Ll~~g--a~~~~~~~~~~~~~~~~~~~~~~g~tp 151 (273)
T 2pnn_A 81 RKTDSLKQFVNASYTDSYYKGQTALHI-AIE-----RRN-MTLVTLLVENG--ADVQAAANGDFFKKTKGRPGFYFGELP 151 (273)
T ss_dssp HHTTCHHHHHTCCCCSTTTTTCCHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCBCSGGGSSCSSSCCCCSCBSH
T ss_pred ccccchhHHhhcccccccCCCCCHHHH-HHH-----cCC-HHHHHHHHHCC--CCcCccccccccccccccccccCCCCH
Confidence 22 22 256789999999 999 999 99999999999 99999887 79999
Q ss_pred HHHHHHcCCHHHHHHHHh---cCCCCccCCCCCCCcHHHHHHHcCC---------hhHHHHHHhhcCCCCc------ccC
Q 004165 213 LHFCAAKGNLKAIKVLMK---YKPDLTNVRDNEGTLPVQLAALYGH---------KDTFQYLLKETHGVDI------YSG 274 (770)
Q Consensus 213 Lh~A~~~g~~~iv~~Ll~---~~~~l~~~~d~~g~tpL~~A~~~g~---------~~~v~~Ll~~~~~~~~------~~~ 274 (770)
||+|+..|+.+++++|++ .|++ ++.+|..|.||||+|+..|+ .+++++|+++|++++. ..|
T Consensus 152 L~~A~~~g~~~~v~~Ll~~~~~gad-~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d 230 (273)
T 2pnn_A 152 LSLAACTNQLAIVKFLLQNSWQPAD-ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITN 230 (273)
T ss_dssp HHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCC
T ss_pred HHHHHHcCCHHHHHHHHhcccCCCC-ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccC
Confidence 999999999999999999 8999 89999999999999999998 7999999999988752 389
Q ss_pred CCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHH
Q 004165 275 NDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVL 315 (770)
Q Consensus 275 ~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL 315 (770)
..|.||||+|+..|+.+++++|+++|+.........+.+|-
T Consensus 231 ~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 231 RKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHH 271 (273)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHHTC-------------
T ss_pred CCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhcc
Confidence 99999999999999999999999999854435555555553
No 49
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=9.2e-30 Score=264.33 Aligned_cols=164 Identities=20% Similarity=0.284 Sum_probs=129.2
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHh---hCCcccc----cccCCCCCHHHHHHhccccccC---CchHHHHHHHHHcCCh
Q 004165 130 YYGRYWPLYKMTQKNDWRGVEDFVG---EHPDALT----DKIDGHKTIFHLIAMLLVDVES---DEGTCLVDNLASIVVP 199 (770)
Q Consensus 130 ~~~g~t~L~~A~~~g~~~~v~~LL~---~~~~~~~----~~d~~g~t~Lh~~A~~~~~~~~---g~~~~iv~~Ll~~~~~ 199 (770)
+..|.||||.||..|+.++|+.|++ ..+.+++ ..|..|+||||+ |+. . |+ .++|++|++.|
T Consensus 10 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~-A~~-----~~~~g~-~~~v~~Ll~~g-- 80 (273)
T 2pnn_A 10 RLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLK-AML-----NLHNGQ-NDTIALLLDVA-- 80 (273)
T ss_dssp -CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHH-HHH-----SCBTTB-CHHHHHHHHHH--
T ss_pred CcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHH-HHH-----HHhcCC-hHHHHHHHHhh--
Confidence 3459999999999999999998886 3566655 457889999999 997 6 99 99999999998
Q ss_pred hh-------hcc----ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCC--------------CCCcHHHHHHHcC
Q 004165 200 EA-------LAR----QNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDN--------------EGTLPVQLAALYG 254 (770)
Q Consensus 200 ~~-------~~~----~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~--------------~g~tpL~~A~~~g 254 (770)
++ ++. +|..|.||||+|+..|+.+++++|+++|++ ++.++. .|.||||+|+..|
T Consensus 81 a~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g 159 (273)
T 2pnn_A 81 RKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD-VQAAANGDFFKKTKGRPGFYFGELPLSLAACTN 159 (273)
T ss_dssp HHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTT
T ss_pred ccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cCccccccccccccccccccCCCCHHHHHHHcC
Confidence 54 333 566899999999999999999999999988 788876 6777777777777
Q ss_pred ChhHHHHHHh---hcCCCCcccCCCCchHHHHHHHhch---------HHHHHHHHhhCCCCc
Q 004165 255 HKDTFQYLLK---ETHGVDIYSGNDGALVLANLIHARL---------YDVALDLLKLHPTIG 304 (770)
Q Consensus 255 ~~~~v~~Ll~---~~~~~~~~~~~~g~t~Lh~A~~~~~---------~~iv~~Ll~~~~~~~ 304 (770)
+.+++++|++ .|++++ ..|.+|+||||+|+..|+ .+++++|+++|++++
T Consensus 160 ~~~~v~~Ll~~~~~gad~~-~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n 220 (273)
T 2pnn_A 160 QLAIVKFLLQNSWQPADIS-ARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLH 220 (273)
T ss_dssp CHHHHHHHHHCSSCCCCTT-CCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHhcccCCCCce-eeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcc
Confidence 7777777777 666666 477777777777777666 567777777665543
No 50
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=4.8e-30 Score=263.76 Aligned_cols=160 Identities=23% Similarity=0.288 Sum_probs=142.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHh---hCCccccc----ccCCCCCHHHHHHhccccccC---CchHHHHHHHHHcCChhhh
Q 004165 133 RYWPLYKMTQKNDWRGVEDFVG---EHPDALTD----KIDGHKTIFHLIAMLLVDVES---DEGTCLVDNLASIVVPEAL 202 (770)
Q Consensus 133 g~t~L~~A~~~g~~~~v~~LL~---~~~~~~~~----~d~~g~t~Lh~~A~~~~~~~~---g~~~~iv~~Ll~~~~~~~~ 202 (770)
|+||||.||..|+.+.|+.+++ ..+.+++. +|..|+||||+ |+. . |+ .+++++|++.| +++
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~-A~~-----~~~~g~-~~~v~~Ll~~g--~~~ 72 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMK-AVL-----NLQDGV-NACIMPLLQID--KDS 72 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHH-HHH-----TCBTTB-CTTHHHHHHHH--HHT
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHH-HHH-----ccccch-HHHHHHHHhcC--Ccc
Confidence 7899999999999985543333 56889998 89999999999 999 8 99 99999999999 766
Q ss_pred cc-----------ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCC-------------CCcHHHHHHHcCChhH
Q 004165 203 AR-----------QNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNE-------------GTLPVQLAALYGHKDT 258 (770)
Q Consensus 203 ~~-----------~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~-------------g~tpL~~A~~~g~~~~ 258 (770)
+. +|..|.||||+|+..|+.+++++|+++|++ ++.+|.. |.||||+|+..|+.++
T Consensus 73 ~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~ 151 (256)
T 2etb_A 73 GNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD-VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDV 151 (256)
T ss_dssp TCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHH
T ss_pred cchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcccccccccccccccccCCCCHHHHHHHcCCHHH
Confidence 53 346799999999999999999999999999 8888886 9999999999999999
Q ss_pred HHHHHh---hcCCCCcccCCCCchHHHHHHH--hchHH-------HHHHHHhhCCCC
Q 004165 259 FQYLLK---ETHGVDIYSGNDGALVLANLIH--ARLYD-------VALDLLKLHPTI 303 (770)
Q Consensus 259 v~~Ll~---~~~~~~~~~~~~g~t~Lh~A~~--~~~~~-------iv~~Ll~~~~~~ 303 (770)
+++|++ .|++++ ..|.+|+||||+|+. .++.+ ++++|+++|+++
T Consensus 152 v~~Ll~~~~~ga~~n-~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 152 VTYLLENPHQPASLE-ATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp HHHHHHCSSCCCCTT-CCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccccCCCcC-ccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 999999 888888 599999999999998 77888 999999998876
No 51
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=2.1e-29 Score=258.87 Aligned_cols=199 Identities=11% Similarity=0.051 Sum_probs=172.1
Q ss_pred hHH-HHHHHHhcCHHHHHHHHHHHHhcccccccc-ccccCCCCcHHHHHHHc---CCHHHHHHHHhhCCccccc------
Q 004165 94 SWT-LCRMIEINDRQGAEDLVKEVKEAKSSEDAQ-RDEYYGRYWPLYKMTQK---NDWRGVEDFVGEHPDALTD------ 162 (770)
Q Consensus 94 ~~t-L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~~~~~~g~t~L~~A~~~---g~~~~v~~LL~~~~~~~~~------ 162 (770)
|.| ||.|+..|+.+.++.+++.+...+...+.. ...+..|+||||+|+.. |+.++++.|++. +.+++.
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~-g~~~~~~~~~~~ 80 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQI-DKDSGNPKPLVN 80 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHH-HHHTTCSSCGGG
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhc-CCcccchhhhcc
Confidence 556 999999999998888887776444333320 01345699999999999 999999988854 444442
Q ss_pred -----ccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCC-------------CCcHHHHHHHcCCHHH
Q 004165 163 -----KIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRH-------------GRTALHFCAAKGNLKA 224 (770)
Q Consensus 163 -----~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~-------------g~T~Lh~A~~~g~~~i 224 (770)
+|..|.||||+ |+. .|+ .+++++|+++| ++++.+|.. |.||||+|+..|+.++
T Consensus 81 ~~~~~~d~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~g--a~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~ 151 (256)
T 2etb_A 81 AQCTDEFYQGHSALHI-AIE-----KRS-LQCVKLLVENG--ADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDV 151 (256)
T ss_dssp CCCCSTTTTTCCHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHH
T ss_pred cccccccccCCCHHHH-HHH-----cCC-HHHHHHHHHcC--CCCCcccccccccccccccccCCCCHHHHHHHcCCHHH
Confidence 34678999999 999 999 99999999999 999998886 9999999999999999
Q ss_pred HHHHHh---cCCCCccCCCCCCCcHHHHHHH--cCChh-------HHHHHHhhcCCC-------CcccCCCCchHHHHHH
Q 004165 225 IKVLMK---YKPDLTNVRDNEGTLPVQLAAL--YGHKD-------TFQYLLKETHGV-------DIYSGNDGALVLANLI 285 (770)
Q Consensus 225 v~~Ll~---~~~~l~~~~d~~g~tpL~~A~~--~g~~~-------~v~~Ll~~~~~~-------~~~~~~~g~t~Lh~A~ 285 (770)
+++|++ .|++ ++.+|..|.||||+|+. .++.+ ++++|+++|+++ + ..|..|.||||+|+
T Consensus 152 v~~Ll~~~~~ga~-~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~-~~d~~g~tpL~~A~ 229 (256)
T 2etb_A 152 VTYLLENPHQPAS-LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEE-ISNHQGLTPLKLAA 229 (256)
T ss_dssp HHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGG-CCCTTSCCHHHHHH
T ss_pred HHHHHhccccCCC-cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCccccccccc-ccCCCCCCHHHHHH
Confidence 999999 8999 89999999999999999 78888 999999999998 6 58999999999999
Q ss_pred HhchHHHHHHHHhhCCCCc
Q 004165 286 HARLYDVALDLLKLHPTIG 304 (770)
Q Consensus 286 ~~~~~~iv~~Ll~~~~~~~ 304 (770)
..|+.+++++|++++++..
T Consensus 230 ~~g~~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 230 KEGKIEIFRHILQREFSGA 248 (256)
T ss_dssp HTTCHHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHhCCCCCC
Confidence 9999999999999986543
No 52
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=5e-29 Score=256.71 Aligned_cols=201 Identities=14% Similarity=0.117 Sum_probs=173.6
Q ss_pred hhHH-HHHHHHhcCHHHHHHHHHHHHhccccccccc-cccCCCCcHHHHHH---HcCCHHHHHHHHhhCC----------
Q 004165 93 LSWT-LCRMIEINDRQGAEDLVKEVKEAKSSEDAQR-DEYYGRYWPLYKMT---QKNDWRGVEDFVGEHP---------- 157 (770)
Q Consensus 93 ~~~t-L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~-~~~~~g~t~L~~A~---~~g~~~~v~~LL~~~~---------- 157 (770)
.+.+ ||.|++.|+.+.++.|++.+...+...+... ..+..|+||||+|+ ..|+.++++.|+....
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 83 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFIN 83 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHT
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhc
Confidence 4556 9999999999999999987765444443322 12345999999999 7799999998886521
Q ss_pred cccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhcccc--------------CCCCcHHHHHHHcCCHH
Q 004165 158 DALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQN--------------RHGRTALHFCAAKGNLK 223 (770)
Q Consensus 158 ~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d--------------~~g~T~Lh~A~~~g~~~ 223 (770)
...+..|..|.||||+ |+. .|+ .++|++|++.| ++++.+| ..|.||||+|+..|+.+
T Consensus 84 ~~~~~~d~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~g--a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~ 154 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHI-AIE-----RRC-KHYVELLVEKG--ADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPH 154 (260)
T ss_dssp CCBCCSSEESBCHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHH
T ss_pred ccccccccCCCCHHHH-HHH-----cCC-HHHHHHHHhCC--CCcCccccccccCcccccccccCCCCHHHHHHHcCCHH
Confidence 3345556688999999 999 999 99999999999 9999988 68999999999999999
Q ss_pred HHHHHHh---cCCCCccCCCCCCCcHHHHHHHcCC---------hhHHHHHHhhcCCC-------CcccCCCCchHHHHH
Q 004165 224 AIKVLMK---YKPDLTNVRDNEGTLPVQLAALYGH---------KDTFQYLLKETHGV-------DIYSGNDGALVLANL 284 (770)
Q Consensus 224 iv~~Ll~---~~~~l~~~~d~~g~tpL~~A~~~g~---------~~~v~~Ll~~~~~~-------~~~~~~~g~t~Lh~A 284 (770)
++++|++ .|++ ++.+|..|.||||+|+..|+ .+++++|+++|+++ + ..+.+|.||||+|
T Consensus 155 ~v~~Ll~~~~~ga~-~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~-~~d~~g~tpL~~A 232 (260)
T 3jxi_A 155 IVHYLTENGHKQAD-LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEA-LLNNDGLSPLMMA 232 (260)
T ss_dssp HHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGG-CCCTTSCCHHHHH
T ss_pred HHHHHHhccccCCC-CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhh-cccCCCCCHHHHH
Confidence 9999999 8999 89999999999999999888 69999999999887 4 4899999999999
Q ss_pred HHhchHHHHHHHHhhCCCCc
Q 004165 285 IHARLYDVALDLLKLHPTIG 304 (770)
Q Consensus 285 ~~~~~~~iv~~Ll~~~~~~~ 304 (770)
+..|+.+++++|++++++..
T Consensus 233 ~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 233 AKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp HHTTCHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHhCCCcc
Confidence 99999999999999987654
No 53
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=1.8e-28 Score=235.72 Aligned_cols=170 Identities=12% Similarity=0.056 Sum_probs=155.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcH
Q 004165 133 RYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTA 212 (770)
Q Consensus 133 g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~ 212 (770)
+.||||.|+..|+.+.++.|+...+..++.+|..|.||||+ |+. .|+ .+++++|++.| ++++.+|..|.||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-A~~-----~~~-~~~v~~Ll~~g--~~~~~~~~~g~t~ 72 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIW-ASA-----FGE-IETVRFLLEWG--ADPHILAKERESA 72 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHH-HHH-----TTC-HHHHHHHHHHT--CCTTCCCTTCCCH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHH-HHH-----cCC-HHHHHHHHHcC--CCchhhcccCCCH
Confidence 45899999999999999999988777799999999999999 999 999 99999999999 9999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHH
Q 004165 213 LHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDV 292 (770)
Q Consensus 213 Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~i 292 (770)
||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.++
T Consensus 73 L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~~~ 150 (172)
T 3v30_A 73 LSLASTGGYTDIVGLLLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLARGADLT-TEADSGYTPMDLAVALGYRKV 150 (172)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHhCcHHH
Confidence 9999999999999999999999 89999999999999999999999999999999998 599999999999999999999
Q ss_pred HHHHHhhCCCCcccCCCCCCCH
Q 004165 293 ALDLLKLHPTIGRDNIDSRRIV 314 (770)
Q Consensus 293 v~~Ll~~~~~~~~~~d~~g~tp 314 (770)
+++|+++++++. .++..|.||
T Consensus 151 ~~~L~~~~~~~~-~~~~~~~~p 171 (172)
T 3v30_A 151 QQVIENHILKLF-QSNLVPADP 171 (172)
T ss_dssp HHHHHHHHHHHS-CC-------
T ss_pred HHHHHHHHHHHh-cccCCCCCC
Confidence 999999999887 678888877
No 54
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=4.3e-28 Score=231.56 Aligned_cols=161 Identities=22% Similarity=0.285 Sum_probs=142.8
Q ss_pred chhHHHHHHHHhcCHHHHHHHHHHHHhccccccccccccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHH
Q 004165 92 DLSWTLCRMIEINDRQGAEDLVKEVKEAKSSEDAQRDEYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIF 171 (770)
Q Consensus 92 ~~~~tL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~L 171 (770)
+.|..|+.|++.|+.++|+.|++.+. +.+. .+..|+||||+|+..|+.++++.|+ +.+.+++.+|..|+|||
T Consensus 3 dlg~~L~~Aa~~G~~~~v~~Ll~~Ga----dvn~---~d~~g~t~l~~a~~~~~~~~~~~ll-~~gad~~~~d~~g~TpL 74 (169)
T 4gpm_A 3 ELGKRLIEAAENGNKDRVKDLIENGA----DVNA---SDSDGRTPLHHAAENGHKEVVKLLI-SKGADVNAKDSDGRTPL 74 (169)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTC----CTTC---CCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHCCC----CCCC---cCCCCCCHHHHHHHcCCHHHHHHHH-hcccchhhhccCCCCHH
Confidence 34666999999999999999996542 2221 2345999999999999999999777 56899999999999999
Q ss_pred HHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHH
Q 004165 172 HLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAA 251 (770)
Q Consensus 172 h~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~ 251 (770)
|+ |+. .|+ .++|++|++.| +++|.+|..|+||||+|+..|+.+++++|++.|++ ++.+|.+|.||||+|+
T Consensus 75 h~-A~~-----~g~-~~~v~~Ll~~g--advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~ 144 (169)
T 4gpm_A 75 HH-AAE-----NGH-KEVVKLLISKG--ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNTSDSDGRTPLDLAR 144 (169)
T ss_dssp HH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHH
T ss_pred HH-HHH-----cCC-HHHHHHHHHCc--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHH
Confidence 99 999 999 99999999999 99999999999999999999999999999999999 8999999999999999
Q ss_pred HcCChhHHHHHHhhcCCCC
Q 004165 252 LYGHKDTFQYLLKETHGVD 270 (770)
Q Consensus 252 ~~g~~~~v~~Ll~~~~~~~ 270 (770)
..|+.+++++|+++|++++
T Consensus 145 ~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 145 EHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp HTTCHHHHHHHHTC-----
T ss_pred HcCCHHHHHHHHHCCCCcC
Confidence 9999999999999999876
No 55
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=6.5e-29 Score=255.88 Aligned_cols=162 Identities=21% Similarity=0.232 Sum_probs=141.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHh---hCCccccccc----CCCCCHHHHHHh---ccccccCCchHHHHHHHHHcCChhh
Q 004165 132 GRYWPLYKMTQKNDWRGVEDFVG---EHPDALTDKI----DGHKTIFHLIAM---LLVDVESDEGTCLVDNLASIVVPEA 201 (770)
Q Consensus 132 ~g~t~L~~A~~~g~~~~v~~LL~---~~~~~~~~~d----~~g~t~Lh~~A~---~~~~~~~g~~~~iv~~Ll~~~~~~~ 201 (770)
.|.|+||.||+.|+.+.++.|+. ..+.+++..+ ..|+||||+ |+ + .|+ .+++++|++.| ++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~-A~~~~~-----~g~-~~~v~~Ll~~g--~~ 74 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPK-ALLNLS-----AGR-NDTIPILLDIA--EK 74 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHH-HHTSCB-----TTB-CTHHHHHHHHH--HH
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHH-HHHHhh-----cCC-HHHHHHHHHhc--cc
Confidence 47899999999999997766665 4677888766 668999999 98 7 899 99999999998 44
Q ss_pred -----------hccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCC--------------CCCCcHHHHHHHcCCh
Q 004165 202 -----------LARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRD--------------NEGTLPVQLAALYGHK 256 (770)
Q Consensus 202 -----------~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d--------------~~g~tpL~~A~~~g~~ 256 (770)
++..|..|.||||+|+..|+.+++++|++.|++ ++.+| ..|.||||+|+..|+.
T Consensus 75 ~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~ 153 (260)
T 3jxi_A 75 TGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD-VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQP 153 (260)
T ss_dssp TTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCH
T ss_pred ccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC-cCccccccccCcccccccccCCCCHHHHHHHcCCH
Confidence 344555899999999999999999999999999 88888 6899999999999999
Q ss_pred hHHHHHHh---hcCCCCcccCCCCchHHHHHHHhch---------HHHHHHHHhhCCCCc
Q 004165 257 DTFQYLLK---ETHGVDIYSGNDGALVLANLIHARL---------YDVALDLLKLHPTIG 304 (770)
Q Consensus 257 ~~v~~Ll~---~~~~~~~~~~~~g~t~Lh~A~~~~~---------~~iv~~Ll~~~~~~~ 304 (770)
+++++|++ .|++++ ..|.+|+||||+|+..++ .+++++|+++|+++.
T Consensus 154 ~~v~~Ll~~~~~ga~~~-~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~ 212 (260)
T 3jxi_A 154 HIVHYLTENGHKQADLR-RQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLF 212 (260)
T ss_dssp HHHHHHHHCSSCCCCTT-CCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhccccCCCCc-ccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccc
Confidence 99999999 888888 599999999999998777 689999999987764
No 56
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=3.5e-27 Score=225.42 Aligned_cols=161 Identities=13% Similarity=0.101 Sum_probs=153.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCc
Q 004165 132 GRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRT 211 (770)
Q Consensus 132 ~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T 211 (770)
.|.||||.|+..|+.++++.|++. +.+++.+|..|.||||+ |+. .|+ .+++++|++.| ++++.+|..|.|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~L~~-A~~-----~~~-~~~v~~Ll~~g--~~~~~~~~~g~t 71 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQ-ENVINHTDEEGFTPLMW-AAA-----HGQ-IAVVEFLLQNG--ADPQLLGKGRES 71 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHH-SSCTTCCCTTSCCHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCTTCCC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHc-CCCcCCCCCCCCCHHHH-HHH-----CCC-HHHHHHHHHcC--CCCCCcCCCCCc
Confidence 378999999999999999988866 68899999999999999 999 999 99999999999 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHH
Q 004165 212 ALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYD 291 (770)
Q Consensus 212 ~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~ 291 (770)
|||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+
T Consensus 72 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~ 149 (167)
T 3v31_A 72 ALSLACSKGYTDIVKMLLDCGVD-VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPT-IETDSGYNSMDLAVALGYRS 149 (167)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCcHH
Confidence 99999999999999999999999 89999999999999999999999999999999998 59999999999999999999
Q ss_pred HHHHHHhhCCCCc
Q 004165 292 VALDLLKLHPTIG 304 (770)
Q Consensus 292 iv~~Ll~~~~~~~ 304 (770)
++++|+++++++.
T Consensus 150 ~~~~L~~~~~~~~ 162 (167)
T 3v31_A 150 VQQVIESHLLKLL 162 (167)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987654
No 57
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=3.1e-27 Score=245.47 Aligned_cols=194 Identities=16% Similarity=0.166 Sum_probs=172.2
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhccccccccccccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHh
Q 004165 97 LCRMIEINDRQGAEDLVKEVKEAKSSEDAQRDEYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAM 176 (770)
Q Consensus 97 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~ 176 (770)
+|.|+..++.+.++.+++.+.... .+ ..+..|+||||+|+..|+.++++.|++....+++..+..|.||||+ |+
T Consensus 80 l~~a~~~~~~~~~~~l~~~~~~~~----~n-~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~-a~ 153 (276)
T 4hbd_A 80 AHPELVRRHLVTFRAMSARLLDYV----VN-IADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIML-TA 153 (276)
T ss_dssp CCHHHHHHHHHHHHHHCHHHHHHH----HT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHH-GG
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhc----Cc-CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHH-HH
Confidence 788999999999999987765211 11 1234599999999999999999988877656999999999999999 99
Q ss_pred ccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCCh
Q 004165 177 LLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHK 256 (770)
Q Consensus 177 ~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~ 256 (770)
.......++ .++++.|++.| .+.+..|..|+||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.
T Consensus 154 ~~~~~~~~~-~~~v~~Ll~~g--~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad-~n~~d~~G~TpLh~A~~~g~~ 229 (276)
T 4hbd_A 154 LATLKTQDD-IETVLQLFRLG--NINAKASQAGQTALMLAVSHGRVDVVKALLACEAD-VNVQDDDGSTALMCACEHGHK 229 (276)
T ss_dssp GCCCCSHHH-HHHHHHHHHHS--CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCH
T ss_pred HHHhhhhhh-HHHHHHHHHcC--CCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCH
Confidence 422222788 99999999999 88888999999999999999999999999999999 899999999999999999999
Q ss_pred hHHHHHHh-hcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCC
Q 004165 257 DTFQYLLK-ETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHP 301 (770)
Q Consensus 257 ~~v~~Ll~-~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~ 301 (770)
+++++|++ .|++++ ..|.+|.||||+|+..|+.+++++|+++..
T Consensus 230 ~iv~~Ll~~~gad~~-~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 230 EIAGLLLAVPSCDIS-LTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp HHHHHHHTSTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred HHHHHHHhcCCCCCc-CcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 99999999 899998 599999999999999999999999999853
No 58
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=6.7e-27 Score=226.28 Aligned_cols=161 Identities=17% Similarity=0.228 Sum_probs=155.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcH
Q 004165 133 RYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTA 212 (770)
Q Consensus 133 g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~ 212 (770)
+.++||.||..|+.++++.|+...+.+++.+|..|.||||+ |+. .|+ .+++++|++.| ++++.+|..|.||
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-A~~-----~~~-~~~v~~Ll~~g--~~~~~~~~~g~t~ 75 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHW-ACR-----EGR-SAVVEMLIMRG--ARINVMNRGDDTP 75 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCTTCCCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHH-HHH-----cCc-HHHHHHHHHcC--CCCCCcCCCCCCH
Confidence 67899999999999999999998899999999999999999 999 999 99999999999 9999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHH
Q 004165 213 LHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDV 292 (770)
Q Consensus 213 Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~i 292 (770)
||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..++.++
T Consensus 76 L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpl~~A~~~~~~~~ 153 (179)
T 3f6q_A 76 LHLAASHGHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVS-ICNKYGEMPVDKAKAPLRELL 153 (179)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSS-BCCTTSCCGGGGSCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc-hhccCCCCcHHHHHHHHHHHH
Confidence 9999999999999999999999 89999999999999999999999999999999998 599999999999999999999
Q ss_pred HHHHHhhCCCCc
Q 004165 293 ALDLLKLHPTIG 304 (770)
Q Consensus 293 v~~Ll~~~~~~~ 304 (770)
+++|++.+++++
T Consensus 154 ~~~L~~~g~~~~ 165 (179)
T 3f6q_A 154 RERAEKMGQNLN 165 (179)
T ss_dssp HHHHHHTTCCCS
T ss_pred HHHHHHhhcCcc
Confidence 999999999987
No 59
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=5.6e-27 Score=229.60 Aligned_cols=158 Identities=18% Similarity=0.156 Sum_probs=150.7
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCC
Q 004165 131 YGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGR 210 (770)
Q Consensus 131 ~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~ 210 (770)
..|+||||+|+..|+.++++.|++. +.+++.++..|.||||+ |+. .|+ .+++++|++.| ++++.+|..|.
T Consensus 33 ~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~-A~~-----~~~-~~~v~~Ll~~g--~~~~~~~~~g~ 102 (192)
T 2rfm_A 33 SYNRTPLMVACMLGMENAIDKLVEN-FDKLEDKDIEGSTALIW-AVK-----NNR-LGIAEKLLSKG--SNVNTKDFSGK 102 (192)
T ss_dssp TTCCCHHHHHHHHTCGGGHHHHHHH-HCCTTCCCTTSCCHHHH-HHH-----TTC-HHHHHHHHHHT--CCTTCCCTTSC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHh-ccccccccccCccHHHH-HHH-----cCC-HHHHHHHHHCC--CCCCCCCCCCC
Confidence 4599999999999999999988865 77899999999999999 999 999 99999999999 99999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchH
Q 004165 211 TALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLY 290 (770)
Q Consensus 211 T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~ 290 (770)
||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.
T Consensus 103 t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~ 180 (192)
T 2rfm_A 103 TPLMWSIIFGYSEMSYFLLEHGAN-VNDRNLEGETPLIVASKYGRSEIVKKLLELGADIS-ARDLTGLTAEASARIFGRQ 180 (192)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CBCTTSCBHHHHHHHTTCH
T ss_pred cHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHhCcH
Confidence 999999999999999999999999 89999999999999999999999999999999998 5999999999999999999
Q ss_pred HHHHHHHhhC
Q 004165 291 DVALDLLKLH 300 (770)
Q Consensus 291 ~iv~~Ll~~~ 300 (770)
+++++|++++
T Consensus 181 ~~v~~Ll~~~ 190 (192)
T 2rfm_A 181 EVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhcc
Confidence 9999999875
No 60
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=2.6e-27 Score=246.08 Aligned_cols=193 Identities=15% Similarity=0.173 Sum_probs=169.9
Q ss_pred CCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcH
Q 004165 167 HKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLP 246 (770)
Q Consensus 167 g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tp 246 (770)
+.+++|. |+. .|+ .+.++.+++.+.+..+|.+|..|+||||+|+..|+.+++++|++.|+..++..|..|.||
T Consensus 76 ~~~~l~~-a~~-----~~~-~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tp 148 (276)
T 4hbd_A 76 CRSDAHP-ELV-----RRH-LVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSP 148 (276)
T ss_dssp HSTTCCH-HHH-----HHH-HHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCH
T ss_pred hccCCCH-HHH-----HHH-HHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCH
Confidence 3588999 999 999 999999999883345999999999999999999999999999999994489999999999
Q ss_pred HHHHH-----HcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhC
Q 004165 247 VQLAA-----LYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKK 321 (770)
Q Consensus 247 L~~A~-----~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~ 321 (770)
||+|+ ..++.+++++|++.|...+ ..+..|.||||+|+..|+.+++++|+++|++++ .+|.+|+
T Consensus 149 L~~a~~~~~~~~~~~~~v~~Ll~~g~~~~-~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n-~~d~~G~--------- 217 (276)
T 4hbd_A 149 IMLTALATLKTQDDIETVLQLFRLGNINA-KASQAGQTALMLAVSHGRVDVVKALLACEADVN-VQDDDGS--------- 217 (276)
T ss_dssp HHHGGGCCCCSHHHHHHHHHHHHHSCTTC-CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSC---------
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-CCCCCCC---------
Confidence 99999 6788999999999998777 588999999999999999999999999999876 5555554
Q ss_pred CCcccCCCcchhhhHHHhhccccccccCCCCCCCCCcccccccccccccccccCCCCCCCCCCcccccccchhhhHhHHH
Q 004165 322 PYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRM 401 (770)
Q Consensus 322 ~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (770)
T Consensus 218 -------------------------------------------------------------------------------- 217 (276)
T 4hbd_A 218 -------------------------------------------------------------------------------- 217 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccccCCcchHHHHHHHcCcHHHHHHHHHhCCccccccccC
Q 004165 402 LWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPENRDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQD 481 (770)
Q Consensus 402 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~ 481 (770)
||||+||..|+.++|+.|++.....++.+|.+
T Consensus 218 ------------------------------------------------TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~ 249 (276)
T 4hbd_A 218 ------------------------------------------------TALMCACEHGHKEIAGLLLAVPSCDISLTDRD 249 (276)
T ss_dssp ------------------------------------------------CHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTT
T ss_pred ------------------------------------------------CHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCC
Confidence 45556667788999999999433348899999
Q ss_pred CchHHHHHHhcChhHHHHHHhhcC
Q 004165 482 EHRIFDLAVLHRREKVFNLIHGVN 505 (770)
Q Consensus 482 G~T~LH~Av~~g~~~iv~~Ll~~~ 505 (770)
|+||||+|+.+|+.+++++|++..
T Consensus 250 g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 250 GSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcc
Confidence 999999999999999999999865
No 61
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=1.2e-26 Score=222.17 Aligned_cols=157 Identities=25% Similarity=0.274 Sum_probs=149.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCc
Q 004165 132 GRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRT 211 (770)
Q Consensus 132 ~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T 211 (770)
.+.++|+.||..|+.+++++|++ .+.+++.+|..|.||||+ |+. .|+ .+++++|++.| ++++.+|..|.|
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~-A~~-----~~~-~~~v~~Ll~~g--~~~~~~~~~g~t 82 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRILMA-NGADVNAEDASGWTPLHL-AAF-----NGH-LEIVEVLLKNG--ADVNAVDHAGMT 82 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCTTSCC
T ss_pred cccchHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHH-HHH-----cCC-HHHHHHHHHcC--CCCCccCCCCCC
Confidence 46799999999999999997775 588999999999999999 999 999 99999999999 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHH
Q 004165 212 ALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYD 291 (770)
Q Consensus 212 ~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~ 291 (770)
|||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+
T Consensus 83 ~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~ 160 (169)
T 2y1l_E 83 PLRLAALFGHLEIVEVLLKNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN-AQDKFGKTAFDISIDNGNED 160 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHhCCHH
Confidence 99999999999999999999999 89999999999999999999999999999999988 59999999999999999999
Q ss_pred HHHHHHhhC
Q 004165 292 VALDLLKLH 300 (770)
Q Consensus 292 iv~~Ll~~~ 300 (770)
++++|++.|
T Consensus 161 ~~~~L~~~G 169 (169)
T 2y1l_E 161 LAEILQKLN 169 (169)
T ss_dssp HHHHHHTC-
T ss_pred HHHHHHHcC
Confidence 999999875
No 62
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=1.4e-28 Score=247.88 Aligned_cols=202 Identities=11% Similarity=0.032 Sum_probs=162.8
Q ss_pred HHHHHHcCChhhhcc---ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhc
Q 004165 190 VDNLASIVVPEALAR---QNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKET 266 (770)
Q Consensus 190 v~~Ll~~~~~~~~~~---~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~ 266 (770)
++.|++.| ++++. .+..|.||||.|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|++.|
T Consensus 1 v~~ll~~~--~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 77 (229)
T 2vge_A 1 MRSVLRKA--GSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMND-PSQPNEEGITALHNAICGANYSIVDFLITAG 77 (229)
T ss_dssp -----------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CeehhccC--CCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 46788888 65544 445677899999999999999999999999 8999999999999999999999999999999
Q ss_pred CCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhcccccc
Q 004165 267 HGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARK 346 (770)
Q Consensus 267 ~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~ 346 (770)
++++ ..|..|.||||+|+..|+.+++++|++.|+++....+.+|.||||+|+.
T Consensus 78 a~~n-~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a-------------------------- 130 (229)
T 2vge_A 78 ANVN-SPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDP-------------------------- 130 (229)
T ss_dssp CCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCT--------------------------
T ss_pred CCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHH--------------------------
Confidence 9998 5999999999999999999999999999999873333566666665410
Q ss_pred ccCCCCCCCCCcccccccccccccccccCCCCCCCCCCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHH
Q 004165 347 ELVPSIQTNDDETVDRDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRT 426 (770)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 426 (770)
T Consensus 131 -------------------------------------------------------------------------------- 130 (229)
T 2vge_A 131 -------------------------------------------------------------------------------- 130 (229)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhccccCCccccCCcchHHHHHHHcCcHHHHHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcCc
Q 004165 427 VEIVRIICQGVIWTNPENRDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVNF 506 (770)
Q Consensus 427 ~~~l~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~~ 506 (770)
+..|+.+++++|++.+++ ++..|..|.||+|.++..+.. ++|++.+
T Consensus 131 -----------------------------~~~~~~~~v~~Ll~~ga~-~~~~~~~~~~~l~~~~~~~~~---~~ll~~g- 176 (229)
T 2vge_A 131 -----------------------------YREGYADCATYLADVEQS-MGLMNSGAVYALWDYSAEFGD---ELSFREG- 176 (229)
T ss_dssp -----------------------------TSTTHHHHHHHHHHHHHH-TTTSGGGEEEESSCBCCSSTT---BCCBCTT-
T ss_pred -----------------------------HhcChHHHHHHHHHcCCC-cccccCCchHHHHHHhhcccc---ccCcccc-
Confidence 455778999999999887 778899999999976665543 5677766
Q ss_pred ccccccccccCCCchhhhhhccCCCCCcc
Q 004165 507 TTFLFSFRDFLGNNILHLAGRLVPSSEVA 535 (770)
Q Consensus 507 ~~~~~n~~D~~G~T~LHlAa~~g~~~~v~ 535 (770)
...+++.+|.+|+||||+|++.|+.+.|.
T Consensus 177 a~~~~~~~d~~G~TpL~~A~~~g~~~~v~ 205 (229)
T 2vge_A 177 ESVTVLRRDGPEETDWWWAALHGQEGYVP 205 (229)
T ss_dssp CEEEEEESSCTTCSSEEEEEETTEEEEEE
T ss_pred ccccccccCCCcccHHHHHHHcCCcceee
Confidence 23448899999999999999999975553
No 63
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=1.6e-26 Score=219.53 Aligned_cols=157 Identities=19% Similarity=0.226 Sum_probs=146.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcH
Q 004165 133 RYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTA 212 (770)
Q Consensus 133 g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~ 212 (770)
..||||.|+..|+.++++.|+ +.+.+++.+|..|+||||+ |+. |+ .+++++|++.| ++++.+|..|.||
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll-~~~~~~~~~~~~g~t~L~~-A~~------~~-~~~v~~Ll~~g--~~~~~~~~~g~t~ 73 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLL-QNNVNVNAQNGFGRTALQV-MKL------GN-PEIARRLLLRG--ANPDLKDRTGFAV 73 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHT-TSCCCTTCCCTTSCCHHHH-CCS------SC-HHHHHHHHHTT--CCTTCCCTTSCCH
T ss_pred HhhHHHHHHHcCCHHHHHHHH-hCCCCccccCccCccHHHH-HHc------Cc-HHHHHHHHHcC--CCCCCCCCCCCCH
Confidence 569999999999999999877 5688999999999999999 875 78 99999999999 9999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCC-CcccCCCCchHHHHHHHhchHH
Q 004165 213 LHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGV-DIYSGNDGALVLANLIHARLYD 291 (770)
Q Consensus 213 Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~g~t~Lh~A~~~~~~~ 291 (770)
||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++. + ..+..|.||||+|+..|+.+
T Consensus 74 L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~~g~t~l~~A~~~~~~~ 151 (162)
T 1ihb_A 74 IHDAARAGFLDTLQTLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVG-HRNHKGDTACDLARLYGRNE 151 (162)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTT-CCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCC-CcCCCCCcHHHHHHHcCCHH
Confidence 9999999999999999999999 8999999999999999999999999999999874 6 58999999999999999999
Q ss_pred HHHHHHhhCCC
Q 004165 292 VALDLLKLHPT 302 (770)
Q Consensus 292 iv~~Ll~~~~~ 302 (770)
++++|+++|++
T Consensus 152 ~~~~Ll~~GAd 162 (162)
T 1ihb_A 152 VVSLMQANGAG 162 (162)
T ss_dssp HHHHHHHTC--
T ss_pred HHHHHHHhCCC
Confidence 99999999874
No 64
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=4.8e-27 Score=223.99 Aligned_cols=158 Identities=18% Similarity=0.140 Sum_probs=149.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCc
Q 004165 132 GRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRT 211 (770)
Q Consensus 132 ~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T 211 (770)
.|.||||.|+..|+.++++.|+...+.+++..+..|.||||+ |+. .|+ .+++++|++.| ++++.+|..|.|
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-A~~-----~~~-~~~v~~Ll~~g--~~~~~~~~~g~t 77 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHF-AAG-----YNR-VSVVEYLLQHG--ADVHAKDKGGLV 77 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCTTSCC
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHH-HHH-----cCh-HHHHHHHHhcC--CCCCccCCCCCC
Confidence 378999999999999999999988888888898999999999 999 999 99999999999 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHH
Q 004165 212 ALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYD 291 (770)
Q Consensus 212 ~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~ 291 (770)
|||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..+.+|.||||+|+. ++.+
T Consensus 78 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~a~~-~~~~ 154 (165)
T 3twr_A 78 PLHNACSYGHYEVAELLVKHGAV-VNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPT-KKNRDGNTPLDLVKD-GDTD 154 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCTGGGSCT-TCHH
T ss_pred HHHHHHHcCcHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCChhHhHhc-CChH
Confidence 99999999999999999999999 89999999999999999999999999999999998 599999999999877 8899
Q ss_pred HHHHHHhhCC
Q 004165 292 VALDLLKLHP 301 (770)
Q Consensus 292 iv~~Ll~~~~ 301 (770)
++++|+++|+
T Consensus 155 i~~~L~~~gA 164 (165)
T 3twr_A 155 IQDLLRGDAA 164 (165)
T ss_dssp HHHHHHTC--
T ss_pred HHHHHhhccc
Confidence 9999999875
No 65
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=3.4e-29 Score=269.87 Aligned_cols=282 Identities=12% Similarity=0.035 Sum_probs=192.8
Q ss_pred HHHHHH-hcCHHHHHHHHHHHHhccccccccccccCCCCcHHHHHHHcCCHHHHHHHHhhCCc--ccccccCCCCCHHHH
Q 004165 97 LCRMIE-INDRQGAEDLVKEVKEAKSSEDAQRDEYYGRYWPLYKMTQKNDWRGVEDFVGEHPD--ALTDKIDGHKTIFHL 173 (770)
Q Consensus 97 L~~A~~-~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~--~~~~~d~~g~t~Lh~ 173 (770)
+++|.. .++.+.++.+++.. . .+.||||+||..|+.++|++|+..... ..+..+..|.||||+
T Consensus 69 ~~~a~~~~~~~~~~~~l~~~g--------~------~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~ 134 (376)
T 2aja_A 69 LYYAHYNRNAKQLWSDAHKKG--------I------KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRL 134 (376)
T ss_dssp HHHHHTTTTCTTHHHHHHHHT--------C------CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHH
T ss_pred HHHHHhcCCCHHHHHHHHHcC--------C------CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHH
Confidence 666665 57788888887442 2 145999999999999999988755321 112334456899999
Q ss_pred HHhccccccCCchHHHHHHHHHcCChhh---hccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccC--CCCCCCcHHH
Q 004165 174 IAMLLVDVESDEGTCLVDNLASIVVPEA---LARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNV--RDNEGTLPVQ 248 (770)
Q Consensus 174 ~A~~~~~~~~g~~~~iv~~Ll~~~~~~~---~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~--~d~~g~tpL~ 248 (770)
|+. .|+ .++|++|+++| ++ .+..+.+ .||||+||..|+.++|++|+++|++ ++. .|..|.||||
T Consensus 135 -Aa~-----~G~-~eiv~~Ll~~g--ad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~-~~~~~~d~~g~TpL~ 203 (376)
T 2aja_A 135 -AAE-----NGH-LHVLNRLCELA--PTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPT-EATAMIQAENYYAFR 203 (376)
T ss_dssp -HHH-----TTC-HHHHHHHHHSC--TTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGG-GHHHHHHHHHHHHHH
T ss_pred -HHH-----cCC-HHHHHHHHhCC--CCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCc-cchhccCCCCCCHHH
Confidence 999 999 99999999999 53 2222333 9999999999999999999999998 676 8889999999
Q ss_pred HHH-HcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCCCcccC
Q 004165 249 LAA-LYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKPYAFAS 327 (770)
Q Consensus 249 ~A~-~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~~~~~s 327 (770)
+|+ ..|+.++|++|++.|+ .|.||||+|+..|+.+++++|+++++++. ..| ++++.|+..+..
T Consensus 204 ~Aa~~~G~~eiv~~Ll~~ga--------~~~taL~~Aa~~g~~evv~lL~~~ga~~~-~~~----~~l~~A~~~g~~--- 267 (376)
T 2aja_A 204 WAAVGRGHHNVINFLLDCPV--------MLAYAEIHEFEYGEKYVNPFIARHVNRLK-EMH----DAFKLSNPDGVF--- 267 (376)
T ss_dssp HHHSTTCCHHHHHHHTTSHH--------HHHHHHHCTTTTTTTTHHHHHHHHHHHHH-HHH----TTTTTTSSSSCC---
T ss_pred HHHHHCCCHHHHHHHHhCCC--------ccchHHHHHHHCCCHHHHHHHHhcCcccc-ccc----HHHHHHHHCCCh---
Confidence 999 9999999999998753 38999999999999999999999987764 222 366666665521
Q ss_pred CCcchhhhHHHhhccccccccCCCCCCCCCcccccccccccccccccCCCCCCCCCCcccccccchhhhHhHHHHHHHHh
Q 004165 328 GSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDVENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLM 407 (770)
Q Consensus 328 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (770)
..+..
T Consensus 268 ----~vv~~----------------------------------------------------------------------- 272 (376)
T 2aja_A 268 ----DLVTK----------------------------------------------------------------------- 272 (376)
T ss_dssp ----CCSSH-----------------------------------------------------------------------
T ss_pred ----hhhcH-----------------------------------------------------------------------
Confidence 00000
Q ss_pred hcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccccCCcchHHHHHHHcCcHHHHHHHHHhCCcc----ccccccCCc
Q 004165 408 RLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPENRDRLLGAMFTAARLGIPEFVNEFIMAYDNS----AHLFAQDEH 483 (770)
Q Consensus 408 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~----~~~~d~~G~ 483 (770)
........+++.+... ...+..+.+++|++..... .....+.+.
T Consensus 273 -------------~~~~~~~~~~~~li~~-------------------~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~ 320 (376)
T 2aja_A 273 -------------SECLQGFYMLRNLIRR-------------------NDEVLLDDIRFLLSIPGIKALAPTATIPGDAN 320 (376)
T ss_dssp -------------HHHHHHHHHHHHHHHH-------------------CCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCC
T ss_pred -------------HhhhhhHHHHHHHHHc-------------------chhhHHHHHHHHHhChhhhhhhccCCCCCCcc
Confidence 0000001111111111 1224577888888642210 112345678
Q ss_pred hHHHHHHhcChhHHHHHHhhcCcccccccccccCCCchhhhhhccCCCC
Q 004165 484 RIFDLAVLHRREKVFNLIHGVNFTTFLFSFRDFLGNNILHLAGRLVPSS 532 (770)
Q Consensus 484 T~LH~Av~~g~~~iv~~Ll~~~~~~~~~n~~D~~G~T~LHlAa~~g~~~ 532 (770)
||||+|++.|+.+++++|++.+ ..+|..|+|++.+|.+.|+.+
T Consensus 321 ~~L~~A~~~g~~e~v~lLl~~~------~v~~~~~~~~~~~~~~~~~~~ 363 (376)
T 2aja_A 321 ELLRLALRLGNQGACALLLSIP------SVLALTKANNYYINETGGRLD 363 (376)
T ss_dssp HHHHHHHHHTCTTHHHHHTTSH------HHHHSCC--------------
T ss_pred HHHHHHHHcCcHHHHHHHHcCh------HHHHHHHHhcccccccccccc
Confidence 9999999999999999999865 778999999999999998853
No 66
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.94 E-value=2.3e-26 Score=220.86 Aligned_cols=170 Identities=19% Similarity=0.146 Sum_probs=146.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhc
Q 004165 209 GRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHAR 288 (770)
Q Consensus 209 g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~ 288 (770)
+.||||.|+..|+.++++.|++.+++.++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH-ILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCch-hhcccCCCHHHHHHHCC
Confidence 57999999999999999999999998789999999999999999999999999999999998 58999999999999999
Q ss_pred hHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCccccccccccc
Q 004165 289 LYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDVENLT 368 (770)
Q Consensus 289 ~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (770)
+.+++++|+++++++. .+|.+
T Consensus 81 ~~~~v~~Ll~~g~~~~-~~~~~---------------------------------------------------------- 101 (172)
T 3v30_A 81 YTDIVGLLLERDVDIN-IYDWN---------------------------------------------------------- 101 (172)
T ss_dssp CHHHHHHHHTTTCCTT-CCCTT----------------------------------------------------------
T ss_pred CHHHHHHHHHcCCCCC-CCCCC----------------------------------------------------------
Confidence 9999999999988876 44444
Q ss_pred ccccccCCCCCCCCCCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccccCCc
Q 004165 369 VTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPENRDRL 448 (770)
Q Consensus 369 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~g 448 (770)
|
T Consensus 102 -------------------------------------------------------------------------------g 102 (172)
T 3v30_A 102 -------------------------------------------------------------------------------G 102 (172)
T ss_dssp -------------------------------------------------------------------------------S
T ss_pred -------------------------------------------------------------------------------C
Confidence 4
Q ss_pred chHHHHHHHcCcHHHHHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcCcccccccccccCCCch
Q 004165 449 LGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVNFTTFLFSFRDFLGNNI 521 (770)
Q Consensus 449 ~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~~~~~~~n~~D~~G~T~ 521 (770)
.||||+|+..|+.++|+.|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.+ ..+..++..|.||
T Consensus 103 ~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~---~~~~~~~~~~~~p 171 (172)
T 3v30_A 103 GTPLLYAVRGNHVKCVEALLARGAD-LTTEADSGYTPMDLAVALGYRKVQQVIENHI---LKLFQSNLVPADP 171 (172)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHH---HHHSCC-------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHhCcHHHHHHHHHHH---HHHhcccCCCCCC
Confidence 4566666777889999999998877 7889999999999999999999999999988 7778888888887
No 67
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=4.8e-26 Score=214.81 Aligned_cols=154 Identities=21% Similarity=0.204 Sum_probs=144.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcH
Q 004165 133 RYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTA 212 (770)
Q Consensus 133 g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~ 212 (770)
+.||||.|+..|+.++++.|+...+.+++..|..|.||||+ | . .|+ .+++++|++.| ++++.+|..|.||
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~-~-----~~~-~~~v~~Ll~~g--~~~~~~~~~g~t~ 71 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-M-M-----FGS-TAIALELLKQG--ASPNVQDTSGTSP 71 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-S-C-----TTC-HHHHHHHHHTT--CCTTCCCTTSCCH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-H-H-----cCC-HHHHHHHHHCC--CCCCCcCCCCCCH
Confidence 46899999999999999999988667999999999999999 4 4 588 99999999999 9999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHH
Q 004165 213 LHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDV 292 (770)
Q Consensus 213 Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~i 292 (770)
||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|++. ++++ ..+.+|.||||+|+..|+.++
T Consensus 72 L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~-~~~~~g~t~l~~A~~~~~~~~ 148 (156)
T 1bd8_A 72 VHDAARTGFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLH-RRDARGLTPLELALQRGAQDL 148 (156)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTT-CCCTTSCCHHHHHHHSCCHHH
T ss_pred HHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCC-CcCCCCCCHHHHHHHcCcHHH
Confidence 9999999999999999999999 899999999999999999999999999999 8888 599999999999999999999
Q ss_pred HHHHHhh
Q 004165 293 ALDLLKL 299 (770)
Q Consensus 293 v~~Ll~~ 299 (770)
+++|+++
T Consensus 149 v~~Ll~~ 155 (156)
T 1bd8_A 149 VDILQGH 155 (156)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 9999975
No 68
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=4.3e-26 Score=223.29 Aligned_cols=152 Identities=16% Similarity=0.176 Sum_probs=141.2
Q ss_pred ccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccC
Q 004165 159 ALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNV 238 (770)
Q Consensus 159 ~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~ 238 (770)
.++.+|..|+||||+ |+. .|+ .+++++|++.| ++++.+|..|.||||+|+..|+.+++++|++.|++ ++.
T Consensus 27 ~~n~~d~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~ 96 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMV-ACM-----LGM-ENAIDKLVENF--DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-VNT 96 (192)
T ss_dssp HHTCCCTTCCCHHHH-HHH-----HTC-GGGHHHHHHHH--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTC
T ss_pred HHhCcCCCCCCHHHH-HHH-----cCC-HHHHHHHHHhc--cccccccccCccHHHHHHHcCCHHHHHHHHHCCCC-CCC
Confidence 467788999999999 999 999 99999999999 89999999999999999999999999999999999 899
Q ss_pred CCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHH
Q 004165 239 RDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTL 318 (770)
Q Consensus 239 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A 318 (770)
+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|+++. .+|.+|.||||+|
T Consensus 97 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A 174 (192)
T 2rfm_A 97 KDFSGKTPLMWSIIFGYSEMSYFLLEHGANVN-DRNLEGETPLIVASKYGRSEIVKKLLELGADIS-ARDLTGLTAEASA 174 (192)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CBCTTSCBHHHHH
T ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHHHH
Confidence 99999999999999999999999999999998 599999999999999999999999999999887 6777777777766
Q ss_pred HhCC
Q 004165 319 AKKP 322 (770)
Q Consensus 319 a~~~ 322 (770)
+..+
T Consensus 175 ~~~~ 178 (192)
T 2rfm_A 175 RIFG 178 (192)
T ss_dssp HHTT
T ss_pred HHhC
Confidence 6554
No 69
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=1.4e-25 Score=210.94 Aligned_cols=150 Identities=19% Similarity=0.132 Sum_probs=136.7
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHH
Q 004165 134 YWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTAL 213 (770)
Q Consensus 134 ~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~L 213 (770)
.++||.|+..|+.+++++|++. +.+++ .+..|.||||+ |+. .|+ .+++++|++.| ++++.+|..|.|||
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~-g~~~~-~~~~g~t~L~~-A~~-----~~~-~~~v~~Ll~~g--~~~~~~~~~g~t~L 71 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMAN-GAPFT-TDWLGTSPLHL-AAQ-----YGH-FSTTEVLLRAG--VSRDARTKVDRTPL 71 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH-TCCCC-CCTTCCCHHHH-HHH-----HTC-HHHHHHHHTTT--CCTTCCCTTCCCHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHc-CCCCC-cCCCCCCHHHH-HHH-----cCC-HHHHHHHHHcC--CCCCCCCCCCCCHH
Confidence 4899999999999999988866 44554 57788999999 999 999 99999999999 88999999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHH
Q 004165 214 HFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVA 293 (770)
Q Consensus 214 h~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv 293 (770)
|+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++
T Consensus 72 ~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~~i~ 149 (153)
T 1awc_B 72 HMAASEGHANIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH-TQSKFCKTAFDISIDNGNEDLA 149 (153)
T ss_dssp HHHHHHTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHcChHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcCCHHHH
Confidence 999999999999999999999 89999999999999999999999999999999888 5899999999999999999999
Q ss_pred HHH
Q 004165 294 LDL 296 (770)
Q Consensus 294 ~~L 296 (770)
++|
T Consensus 150 ~~L 152 (153)
T 1awc_B 150 EIL 152 (153)
T ss_dssp HHH
T ss_pred HHh
Confidence 886
No 70
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.93 E-value=1.7e-25 Score=213.63 Aligned_cols=145 Identities=17% Similarity=0.151 Sum_probs=134.3
Q ss_pred CCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCc
Q 004165 166 GHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTL 245 (770)
Q Consensus 166 ~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~t 245 (770)
.|.||||. |+. .|+ .+++++|++.+ ++++.+|..|.||||+|+..|+.+++++|++.|++ ++..|..|.|
T Consensus 2 ~~~t~L~~-A~~-----~g~-~~~v~~ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t 71 (167)
T 3v31_A 2 ANSLSVHQ-LAA-----QGE-MLYLATRIEQE--NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-PQLLGKGRES 71 (167)
T ss_dssp TTCCCHHH-HHH-----TTC-HHHHHHHHHHS--SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCC
T ss_pred CCcchHHH-HHH-----CCC-HHHHHHHHHcC--CCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCCc
Confidence 46899999 999 999 99999999999 89999999999999999999999999999999999 8999999999
Q ss_pred HHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCC
Q 004165 246 PVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKP 322 (770)
Q Consensus 246 pL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~ 322 (770)
|||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|+++. .+|.+|.||||+|+..+
T Consensus 72 ~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~ 146 (167)
T 3v31_A 72 ALSLACSKGYTDIVKMLLDCGVDVN-EYDWNGGTPLLYAVHGNHVKCVKMLLESGADPT-IETDSGYNSMDLAVALG 146 (167)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcC
Confidence 9999999999999999999999998 599999999999999999999999999999886 66777777666666544
No 71
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=3.9e-28 Score=244.71 Aligned_cols=181 Identities=13% Similarity=0.046 Sum_probs=162.2
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccC
Q 004165 128 DEYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNR 207 (770)
Q Consensus 128 ~~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~ 207 (770)
.....|.||||.|+..|+.++++.|+. .+.+++.+|..|+||||+ |+. .|+ .+++++|++.| ++++.+|.
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~d~~g~tpLh~-A~~-----~g~-~~~v~~Ll~~g--a~~n~~d~ 85 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAVK-EMNDPSQPNEEGITALHN-AIC-----GAN-YSIVDFLITAG--ANVNSPDS 85 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHHH-HSSCTTCCCTTSCCHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCT
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHHh-cCCCCCCCCCCCCCHHHH-HHH-----cCC-HHHHHHHHHCC--CCCCCCCC
Confidence 444558899999999999999998885 578999999999999999 999 999 99999999999 99999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCC-CCCCcHHHHH--HHcCChhHHHHHHhhcCCCCcccCCCCchHHHHH
Q 004165 208 HGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRD-NEGTLPVQLA--ALYGHKDTFQYLLKETHGVDIYSGNDGALVLANL 284 (770)
Q Consensus 208 ~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d-~~g~tpL~~A--~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A 284 (770)
.|+||||+|+..|+.+++++|++.|++ ++.++ ..|.||||+| +..|+.+++++|++.|++++ ..+..|.||+|.+
T Consensus 86 ~g~tpLh~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~-~~~~~~~~~l~~~ 163 (229)
T 2vge_A 86 HGWTPLHCAASCNDTVICMALVQHGAA-IFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMG-LMNSGAVYALWDY 163 (229)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTT-TSGGGEEEESSCB
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC-cccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcc-cccCCchHHHHHH
Confidence 999999999999999999999999999 78876 6999999999 99999999999999999998 5899999999976
Q ss_pred HHhchHHHHHHHHhhCCCC-cccCCCCCCCHHHHHHhCCC
Q 004165 285 IHARLYDVALDLLKLHPTI-GRDNIDSRRIVLKTLAKKPY 323 (770)
Q Consensus 285 ~~~~~~~iv~~Ll~~~~~~-~~~~d~~g~tpL~~Aa~~~~ 323 (770)
+..+. .+.|++.|++. .+.+|.+|+||||+|+..++
T Consensus 164 ~~~~~---~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~ 200 (229)
T 2vge_A 164 SAEFG---DELSFREGESVTVLRRDGPEETDWWWAALHGQ 200 (229)
T ss_dssp CCSST---TBCCBCTTCEEEEEESSCTTCSSEEEEEETTE
T ss_pred hhccc---cccCccccccccccccCCCcccHHHHHHHcCC
Confidence 65543 35778888873 23789999999999999884
No 72
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.93 E-value=1.1e-25 Score=213.57 Aligned_cols=157 Identities=20% Similarity=0.236 Sum_probs=142.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHh
Q 004165 208 HGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHA 287 (770)
Q Consensus 208 ~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~ 287 (770)
...||||.|+..|+.+++++|++.+++ ++.+|..|.||||+|+. |+.+++++|++.|++++ ..+..|.||||+|+..
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVN-VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPD-LKDRTGFAVIHDAARA 80 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCC-TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCC-ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHc
Confidence 467999999999999999999999999 89999999999999999 99999999999999988 5999999999999999
Q ss_pred chHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCcccccccccc
Q 004165 288 RLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDVENL 367 (770)
Q Consensus 288 ~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (770)
|+.+++++|++++++++ .+|.+|
T Consensus 81 ~~~~~v~~Ll~~g~~~~-~~~~~g-------------------------------------------------------- 103 (162)
T 1ihb_A 81 GFLDTLQTLLEFQADVN-IEDNEG-------------------------------------------------------- 103 (162)
T ss_dssp TCHHHHHHHHHTTCCTT-CCCTTS--------------------------------------------------------
T ss_pred CCHHHHHHHHHcCCCCC-CcCCCC--------------------------------------------------------
Confidence 99999999999998876 445444
Q ss_pred cccccccCCCCCCCCCCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccccCC
Q 004165 368 TVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPENRDR 447 (770)
Q Consensus 368 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 447 (770)
T Consensus 104 -------------------------------------------------------------------------------- 103 (162)
T 1ihb_A 104 -------------------------------------------------------------------------------- 103 (162)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchHHHHHHHcCcHHHHHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcC
Q 004165 448 LLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVN 505 (770)
Q Consensus 448 g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~ 505 (770)
.||||+|+..|+.+++++|++.+++.++..|..|+||||+|+.+|+.+++++|++.|
T Consensus 104 -~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 104 -NLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred -CCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhC
Confidence 455556667788999999999999888899999999999999999999999999987
No 73
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.93 E-value=4.5e-25 Score=211.27 Aligned_cols=160 Identities=21% Similarity=0.235 Sum_probs=141.8
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHH
Q 004165 205 QNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANL 284 (770)
Q Consensus 205 ~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A 284 (770)
....+.||||.|++.|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A 87 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGAD-VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVN-AVDHAGMTPLRLA 87 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHH
Confidence 455678999999999999999999999999 89999999999999999999999999999999988 5999999999999
Q ss_pred HHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCccccccc
Q 004165 285 IHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDV 364 (770)
Q Consensus 285 ~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (770)
+..|+.+++++|+++++++. .+|.+
T Consensus 88 ~~~~~~~~~~~Ll~~g~~~~-~~~~~------------------------------------------------------ 112 (169)
T 2y1l_E 88 ALFGHLEIVEVLLKNGADVN-ANDME------------------------------------------------------ 112 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTT-CCCTT------------------------------------------------------
T ss_pred HHcCCHHHHHHHHHcCCCCC-CCCCC------------------------------------------------------
Confidence 99999999999999988875 44444
Q ss_pred ccccccccccCCCCCCCCCCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccc
Q 004165 365 ENLTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPEN 444 (770)
Q Consensus 365 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 444 (770)
T Consensus 113 -------------------------------------------------------------------------------- 112 (169)
T 2y1l_E 113 -------------------------------------------------------------------------------- 112 (169)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCcchHHHHHHHcCcHHHHHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcC
Q 004165 445 RDRLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVN 505 (770)
Q Consensus 445 ~~~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~ 505 (770)
|.||||+|+..|+.++|++|++.+.+ ++.+|..|+||||+|+++|+.+++++|++.|
T Consensus 113 ---g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 113 ---GHTPLHLAAMFGHLEIVEVLLKNGAD-VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp ---SCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred ---CCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 44566667777889999999999877 7789999999999999999999999999864
No 74
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=6.2e-28 Score=260.09 Aligned_cols=197 Identities=12% Similarity=0.122 Sum_probs=154.1
Q ss_pred CCchhHHHHHh-cCChHHHHHHHHhhHHHHhccCCCCCcccchhHHHHHHHHhcCHHHHHHHHHHHHhcccccccccccc
Q 004165 52 GPYCLLYAMIE-SNDWQGVEDFVKQTKEAQSSKDAQGNEYYDLSWTLCRMIEINDRQGAEDLVKEVKEAKSSEDAQRDEY 130 (770)
Q Consensus 52 g~t~Lh~A~~~-~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~~~tL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~ 130 (770)
+.+++++|+.. ++ .+..++++++|.+.+ .+||+|++.|+.++++.|++.+.. .......+
T Consensus 65 ~ll~~~~a~~~~~~---------~~~~~~l~~~g~~~~------T~Lh~Aa~~G~~e~v~~Ll~~ga~----~~~~~~~~ 125 (376)
T 2aja_A 65 QLLCLYYAHYNRNA---------KQLWSDAHKKGIKSE------VICFVAAITGCSSALDTLCLLLTS----DEIVKVIQ 125 (376)
T ss_dssp HHHHHHHHHTTTTC---------TTHHHHHHHHTCCHH------HHHHHHHHHCCHHHHHHHTTC--C----CSSCC--C
T ss_pred HHHHHHHHHhcCCC---------HHHHHHHHHcCCCcC------CHHHHHHHcCCHHHHHHHHHcCCc----HHHHHHhc
Confidence 45788888874 45 556677777777653 239999999999999999955421 00001122
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhhCC----cccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhcc--
Q 004165 131 YGRYWPLYKMTQKNDWRGVEDFVGEHP----DALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALAR-- 204 (770)
Q Consensus 131 ~~g~t~L~~A~~~g~~~~v~~LL~~~~----~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~-- 204 (770)
..|.||||+||..|+.++|++|+.... .+++..+ .||||+ |+. .|+ .++|++|+++| ++++.
T Consensus 126 ~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~---~TpLh~-Aa~-----~G~-~eiv~~Ll~~g--a~~~~~~ 193 (376)
T 2aja_A 126 AENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN---YHAFRL-AAE-----NGH-LHVLNRLCELA--PTEATAM 193 (376)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH---HHHHHH-HHH-----TTC-HHHHHHHHHSC--GGGHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC---CCHHHH-HHH-----CCC-HHHHHHHHHcC--Cccchhc
Confidence 347899999999999999998886542 2343333 899999 999 999 99999999999 88777
Q ss_pred ccCCCCcHHHHHH-HcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHH
Q 004165 205 QNRHGRTALHFCA-AKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLAN 283 (770)
Q Consensus 205 ~d~~g~T~Lh~A~-~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~ 283 (770)
.|..|.||||+|+ ..|+.++|++|++.|++ |.||||+|+..|+.+++++|+++|++.+. . .++++.
T Consensus 194 ~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~--------~~taL~~Aa~~g~~evv~lL~~~ga~~~~-~----~~~l~~ 260 (376)
T 2aja_A 194 IQAENYYAFRWAAVGRGHHNVINFLLDCPVM--------LAYAEIHEFEYGEKYVNPFIARHVNRLKE-M----HDAFKL 260 (376)
T ss_dssp HHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH--------HHHHHHCTTTTTTTTHHHHHHHHHHHHHH-H----HTTTTT
T ss_pred cCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc--------cchHHHHHHHCCCHHHHHHHHhcCccccc-c----cHHHHH
Confidence 8899999999999 99999999999997643 89999999999999999999999876652 2 246777
Q ss_pred HHHhchHHH
Q 004165 284 LIHARLYDV 292 (770)
Q Consensus 284 A~~~~~~~i 292 (770)
|+..|+.++
T Consensus 261 A~~~g~~~v 269 (376)
T 2aja_A 261 SNPDGVFDL 269 (376)
T ss_dssp TSSSSCCCC
T ss_pred HHHCCChhh
Confidence 777777653
No 75
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=1.3e-26 Score=235.54 Aligned_cols=141 Identities=12% Similarity=0.039 Sum_probs=100.2
Q ss_pred CCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCC
Q 004165 165 DGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGT 244 (770)
Q Consensus 165 ~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~ 244 (770)
..|.||||. |++ .++ .++++.|+++| ++++. +..|.||||.|+..|+.+++++|++.|++ ++.+|..|.
T Consensus 3 ~~g~t~L~~-a~~-----~~~-~~~~~~ll~~g--~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~ 71 (239)
T 1ycs_B 3 ITGQVSLPP-GKR-----TNL-RKTGSERIAHG--MRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDD-PSLPNDEGI 71 (239)
T ss_dssp --------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-CCCCCTTSC
T ss_pred ccccccCch-hhh-----hhh-HHHHHHHhccC--CCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCC
Confidence 468999999 999 999 99999999999 88875 47799999999999999999999999998 899999999
Q ss_pred cHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCC-CHHHHH
Q 004165 245 LPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSRR-IVLKTL 318 (770)
Q Consensus 245 tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~-tpL~~A 318 (770)
||||+|+..|+.+++++|+++|++++ ..|.+|.||||+|+..|+.+++++|+++|++++ .+|..|. ||||+|
T Consensus 72 t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 72 TALHNAVCAGHTEIVKFLVQFGVNVN-AADSDGWTPLHCAASCNNVQVCKFLVESGAAVF-AMTYSDMQTAADKC 144 (239)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCSSSCCCHHHHC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-eecCCCCcchHHHH
Confidence 99999999999999999999999999 599999999999999999999999999999988 5665554 888866
No 76
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.92 E-value=1e-24 Score=210.85 Aligned_cols=169 Identities=12% Similarity=0.088 Sum_probs=147.6
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHH
Q 004165 207 RHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIH 286 (770)
Q Consensus 207 ~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~ 286 (770)
..+.+|||.||..|+.+++++|++.++..++..|..|.||||+|+..|+.+++++|++.|++++ ..+..|.||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARIN-VMNRGDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHH
Confidence 4578999999999999999999999665589999999999999999999999999999999998 599999999999999
Q ss_pred hchHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCCCcccCCCcchhhhHHHhhccccccccCCCCCCCCCccccccccc
Q 004165 287 ARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKPYAFASGSRLGRLQRLIYNCIPARKELVPSIQTNDDETVDRDVEN 366 (770)
Q Consensus 287 ~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~~~~~s~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (770)
.|+.+++++|++++++++ .+|.+|.
T Consensus 82 ~~~~~~v~~Ll~~g~~~~-~~d~~g~------------------------------------------------------ 106 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKADIN-AVNEHGN------------------------------------------------------ 106 (179)
T ss_dssp TTCHHHHHHHHHTTCCTT-CCCTTSC------------------------------------------------------
T ss_pred cCCHHHHHHHHHcCCCCC-ccCCCCC------------------------------------------------------
Confidence 999999999999998876 4554444
Q ss_pred ccccccccCCCCCCCCCCcccccccchhhhHhHHHHHHHHhhcCCchHHHHHhhhhhHHHHHHHHHHhhccccCCccccC
Q 004165 367 LTVTSKIHSKKPTPFGSTQQIPTTYGAMLHKLHRMLWNVLMRLGPSIKVIHDQKLTHMRTVEIVRIICQGVIWTNPENRD 446 (770)
Q Consensus 367 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~ 446 (770)
T Consensus 107 -------------------------------------------------------------------------------- 106 (179)
T 3f6q_A 107 -------------------------------------------------------------------------------- 106 (179)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcchHHHHHHHcCcHHHHHHHHHhCCccccccccCCchHHHHHHhcChhHHHHHHhhcCcccccccccccCC
Q 004165 447 RLLGAMFTAARLGIPEFVNEFIMAYDNSAHLFAQDEHRIFDLAVLHRREKVFNLIHGVNFTTFLFSFRDFLG 518 (770)
Q Consensus 447 ~g~tpLh~Aa~~G~~eiv~~LL~~~~~~~~~~d~~G~T~LH~Av~~g~~~iv~~Ll~~~~~~~~~n~~D~~G 518 (770)
||||+|+..|+.++|+.|++.+.+ ++.+|..|+||||+|+..++.+++++|++.+ .+++..+.++
T Consensus 107 ---t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g---~~~~~~~~~~ 171 (179)
T 3f6q_A 107 ---VPLHYACFWGQDQVAEDLVANGAL-VSICNKYGEMPVDKAKAPLRELLRERAEKMG---QNLNRIPYKD 171 (179)
T ss_dssp ---CHHHHHHHTTCHHHHHHHHHTTCC-SSBCCTTSCCGGGGSCHHHHHHHHHHHHHTT---CCCSCBCCCC
T ss_pred ---CHHHHHHHcCCHHHHHHHHHCCCC-cchhccCCCCcHHHHHHHHHHHHHHHHHHhh---cCcccCCccc
Confidence 555566667788999999999877 7889999999999999999999999999998 7777766554
No 77
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.92 E-value=2.2e-24 Score=202.70 Aligned_cols=150 Identities=15% Similarity=0.155 Sum_probs=138.0
Q ss_pred hHHHHHHHHhcCHHHHHHHHHHHHhccccccccccccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHH
Q 004165 94 SWTLCRMIEINDRQGAEDLVKEVKEAKSSEDAQRDEYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHL 173 (770)
Q Consensus 94 ~~tL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~ 173 (770)
+..||.|+..|+.+.++.|++.+. ....+..|.||||+|+..|+.+++++|+ +.+.+++.++..|.||||+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~--------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~ 73 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGA--------PFTTDWLGTSPLHLAAQYGHFSTTEVLL-RAGVSRDARTKVDRTPLHM 73 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTC--------CCCCCTTCCCHHHHHHHHTCHHHHHHHH-TTTCCTTCCCTTCCCHHHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCC--------CCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHH
Confidence 344999999999999999997642 2234556999999999999999999777 5688999999999999999
Q ss_pred HHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHc
Q 004165 174 IAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALY 253 (770)
Q Consensus 174 ~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~ 253 (770)
|+. .|+ .+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..
T Consensus 74 -A~~-----~~~-~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~ 143 (153)
T 1awc_B 74 -AAS-----EGH-ANIVEVLLKHG--ADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD-VHTQSKFCKTAFDISIDN 143 (153)
T ss_dssp -HHH-----HTC-HHHHHHHHTTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHT
T ss_pred -HHH-----cCh-HHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHc
Confidence 999 999 99999999999 99999999999999999999999999999999999 899999999999999999
Q ss_pred CChhHHHHH
Q 004165 254 GHKDTFQYL 262 (770)
Q Consensus 254 g~~~~v~~L 262 (770)
|+.+++++|
T Consensus 144 ~~~~i~~~L 152 (153)
T 1awc_B 144 GNEDLAEIL 152 (153)
T ss_dssp TCHHHHHHH
T ss_pred CCHHHHHHh
Confidence 999999987
No 78
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=5.3e-26 Score=230.98 Aligned_cols=179 Identities=16% Similarity=0.091 Sum_probs=133.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCc
Q 004165 132 GRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRT 211 (770)
Q Consensus 132 ~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T 211 (770)
.|.||||.|+..|+.+.++.|+ ++|.+++.. ..|.||||. |+. .|+ .+++++|++.| ++++.+|..|.|
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll-~~g~~~~~~-~~~~t~L~~-A~~-----~g~-~~~v~~Ll~~g--~~~~~~d~~g~t 72 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERI-AHGMRVKFN-PLPLALLLD-SSL-----EGE-FDLVQRIIYEV--DDPSLPNDEGIT 72 (239)
T ss_dssp -----------------------------------CHHHHHH-HHH-----HTC-HHHHHHHTSTT--SSCCCCCTTSCC
T ss_pred cccccCchhhhhhhHHHHHHHh-ccCCCcccC-chhhHHHHH-HHH-----cCC-HHHHHHHHHcC--CCCCCcCCCCCC
Confidence 4899999999999999999776 568888764 677999999 999 999 99999999999 899999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCc-hHHHHH--HHhc
Q 004165 212 ALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGA-LVLANL--IHAR 288 (770)
Q Consensus 212 ~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~-t~Lh~A--~~~~ 288 (770)
|||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++++. .+..|. ||||+| +..|
T Consensus 73 ~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~~~~t~l~~a~~~~~g 150 (239)
T 1ycs_B 73 ALHNAVCAGHTEIVKFLVQFGVN-VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFA-MTYSDMQTAADKCEEMEEG 150 (239)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCSSSCCCHHHHCCSSSTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcce-ecCCCCcchHHHHHHhhhc
Confidence 99999999999999999999999 899999999999999999999999999999999984 777666 999999 8889
Q ss_pred hHHHHHHHHhhCCCCcc--------cCCCCCCCHHHHHHhCCC
Q 004165 289 LYDVALDLLKLHPTIGR--------DNIDSRRIVLKTLAKKPY 323 (770)
Q Consensus 289 ~~~iv~~Ll~~~~~~~~--------~~d~~g~tpL~~Aa~~~~ 323 (770)
+.+++++|++++++... ..+..+.+|++++...+.
T Consensus 151 ~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 151 YTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp CCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred cHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 99999999999887652 126678888888777663
No 79
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.91 E-value=5.6e-24 Score=202.61 Aligned_cols=159 Identities=20% Similarity=0.161 Sum_probs=139.4
Q ss_pred cchhHH-HHHHHHhcCHHHHHHHHHHHHhccccccccccccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCC
Q 004165 91 YDLSWT-LCRMIEINDRQGAEDLVKEVKEAKSSEDAQRDEYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKT 169 (770)
Q Consensus 91 ~~~~~t-L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t 169 (770)
|..+.+ ||.|+..|+.+.++.|++... .+. ...+..|.||||+|+..|+.+++++|++ .+.+++.+|..|.|
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~-----~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t 77 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQS-----VNC-RDIEGRQSTPLHFAAGYNRVSVVEYLLQ-HGADVHAKDKGGLV 77 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTT-----TTC-CCTTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCC
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCC-----CCc-cccccCCCCHHHHHHHcChHHHHHHHHh-cCCCCCccCCCCCC
Confidence 455666 999999999999999994321 111 1223448899999999999999997774 58899999999999
Q ss_pred HHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHH
Q 004165 170 IFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQL 249 (770)
Q Consensus 170 ~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~ 249 (770)
|||+ |+. .|+ .+++++|++.| ++++.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+
T Consensus 78 ~L~~-A~~-----~~~-~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~ 147 (165)
T 3twr_A 78 PLHN-ACS-----YGH-YEVAELLVKHG--AVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD-PTKKNRDGNTPLDL 147 (165)
T ss_dssp HHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCTGGG
T ss_pred HHHH-HHH-----cCc-HHHHHHHHhCC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCChhHh
Confidence 9999 999 999 99999999999 99999999999999999999999999999999999 89999999999999
Q ss_pred HHHcCChhHHHHHHhhcC
Q 004165 250 AALYGHKDTFQYLLKETH 267 (770)
Q Consensus 250 A~~~g~~~~v~~Ll~~~~ 267 (770)
|+. |+.+++++|+++|+
T Consensus 148 a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 148 VKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp SCT-TCHHHHHHHHTC--
T ss_pred Hhc-CChHHHHHHhhccc
Confidence 877 99999999999875
No 80
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=2.7e-24 Score=197.82 Aligned_cols=134 Identities=19% Similarity=0.121 Sum_probs=128.8
Q ss_pred CcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCc
Q 004165 157 PDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLT 236 (770)
Q Consensus 157 ~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~ 236 (770)
+.+++.++..|.||||+ |+. .|+ .+++++|++.| ++++.+|..|.||||+|+. |+.+++++|+++|++ +
T Consensus 2 ~~~~~~~~~~g~t~L~~-A~~-----~~~-~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~ 70 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLAT-AAA-----RGQ-VETVRQLLEAG--ADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE-P 70 (136)
T ss_dssp CCCCSCCCCCCSCHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-S
T ss_pred CCCccCCCCCCccHHHH-HHH-----cCC-HHHHHHHHHcC--CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-C
Confidence 56788999999999999 999 999 99999999999 9999999999999999999 999999999999999 8
Q ss_pred cCCCCC-CCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCC
Q 004165 237 NVRDNE-GTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPT 302 (770)
Q Consensus 237 ~~~d~~-g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~ 302 (770)
+.+|.. |.||||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..++.+++++|+++|++
T Consensus 71 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 71 NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLD-VCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp SCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCC-CCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999 9999999999999999999999999998 5999999999999999999999999999874
No 81
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.90 E-value=2.9e-23 Score=195.61 Aligned_cols=152 Identities=14% Similarity=0.074 Sum_probs=136.6
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhccccccccccccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHH
Q 004165 95 WTLCRMIEINDRQGAEDLVKEVKEAKSSEDAQRDEYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLI 174 (770)
Q Consensus 95 ~tL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~ 174 (770)
.+||.|+..|+.+.++.|++. . ..+.+ ..+..|.||||+ +..|+.++++.|+ +.+.+++.+|..|.||||+
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~-~----~~~~~-~~~~~g~t~L~~-~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~- 74 (156)
T 1bd8_A 4 DRLSGAAARGDVQEVRRLLHR-E----LVHPD-ALNRFGKTALQV-MMFGSTAIALELL-KQGASPNVQDTSGTSPVHD- 74 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHT-T----CCCTT-CCCTTSCCHHHH-SCTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHH-
T ss_pred hHHHHHHHhCCHHHHHHHHHh-h----CcCcc-ccCCCCCcHHHH-HHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHH-
Confidence 349999999999999999965 1 11221 123459999999 9999999999777 5589999999999999999
Q ss_pred HhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcC
Q 004165 175 AMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYG 254 (770)
Q Consensus 175 A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g 254 (770)
|+. .|+ .+++++|++.| ++++.+|..|.||||+|+..|+.+++++|++. ++ ++.+|..|.||||+|+..|
T Consensus 75 A~~-----~~~-~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~-~~~~~~~g~t~l~~A~~~~ 144 (156)
T 1bd8_A 75 AAR-----TGF-LDTLKVLVEHG--ADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD-LHRRDARGLTPLELALQRG 144 (156)
T ss_dssp HHH-----TTC-HHHHHHHHHTT--CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC-TTCCCTTSCCHHHHHHHSC
T ss_pred HHH-----cCc-HHHHHHHHHcC--CCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC-CCCcCCCCCCHHHHHHHcC
Confidence 999 999 99999999999 99999999999999999999999999999999 87 8999999999999999999
Q ss_pred ChhHHHHHHhh
Q 004165 255 HKDTFQYLLKE 265 (770)
Q Consensus 255 ~~~~v~~Ll~~ 265 (770)
+.+++++|+++
T Consensus 145 ~~~~v~~Ll~~ 155 (156)
T 1bd8_A 145 AQDLVDILQGH 155 (156)
T ss_dssp CHHHHHHHHTT
T ss_pred cHHHHHHHHhh
Confidence 99999999975
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=1.3e-24 Score=210.89 Aligned_cols=156 Identities=8% Similarity=0.006 Sum_probs=137.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCCccccccc-CCCCCHHHHHHhccccccCCchH----HHHHHHHHcCChhhhccccC
Q 004165 133 RYWPLYKMTQKNDWRGVEDFVGEHPDALTDKI-DGHKTIFHLIAMLLVDVESDEGT----CLVDNLASIVVPEALARQNR 207 (770)
Q Consensus 133 g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d-~~g~t~Lh~~A~~~~~~~~g~~~----~iv~~Ll~~~~~~~~~~~d~ 207 (770)
++++|+.|++.|+.+.++.++... ++.++ ..|+||||+ |+. .|+ . +++++|++.| +++|.+|.
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~---~~~~~~~~g~T~Lh~-A~~-----~~~-~~~~~~iv~~Ll~~G--advn~~d~ 73 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKG---YEDKESVLKSNILYD-VLR-----NNN-DEARYKISMFLINKG--ADIKSRTK 73 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHS---SSCHHHHHTTTHHHH-HTT-----CSC-HHHHHHHHHHHHHTT--CCSSCCCT
T ss_pred cccHHHHHHHcCCHHHHHHHHhcC---cccccccCCCCHHHH-HHH-----cCC-cchHHHHHHHHHHCC--CCCCCCCC
Confidence 568899999999999999888653 34555 678999999 999 886 5 5999999999 99999999
Q ss_pred CCCcHHHHHHHcCC------HHHHHHHHhcCCCCccCCCCCCC-cHHHHHHHcCC-----hhHHHHHHh-hcCCCCcccC
Q 004165 208 HGRTALHFCAAKGN------LKAIKVLMKYKPDLTNVRDNEGT-LPVQLAALYGH-----KDTFQYLLK-ETHGVDIYSG 274 (770)
Q Consensus 208 ~g~T~Lh~A~~~g~------~~iv~~Ll~~~~~l~~~~d~~g~-tpL~~A~~~g~-----~~~v~~Ll~-~~~~~~~~~~ 274 (770)
.|+||||+|+..|+ .+++++|+++|++ ++.+|..|. ||||+|+..+. .+++++|++ .|++++ .+|
T Consensus 74 ~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~-~~d 151 (186)
T 3t8k_A 74 EGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD-ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLL-IKD 151 (186)
T ss_dssp TCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCC-SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTT-CCC
T ss_pred CCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCC-CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCc-ccC
Confidence 99999999999887 6889999999999 899999999 99999999554 469999999 999999 599
Q ss_pred CCCchHHHHHHHhchHHHHHHHHhhCCC
Q 004165 275 NDGALVLANLIHARLYDVALDLLKLHPT 302 (770)
Q Consensus 275 ~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~ 302 (770)
..|.||||+|+..|+.+++++|++....
T Consensus 152 ~~G~TpL~~A~~~~~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 152 KWGLTALEFVKRCQKPIALKMMEDYIKK 179 (186)
T ss_dssp TTSCCHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999999987543
No 83
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.90 E-value=4e-24 Score=201.70 Aligned_cols=146 Identities=18% Similarity=0.097 Sum_probs=120.2
Q ss_pred ccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCC
Q 004165 161 TDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRD 240 (770)
Q Consensus 161 ~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d 240 (770)
+..+..|.||||+ |+. .|+ .+++++|++.| ++++.+|..|+||||+|+ .|+.+++++|++.|++ ++.+|
T Consensus 6 ~~~~~~~~t~L~~-A~~-----~g~-~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~-~~~~d 74 (156)
T 1bi7_B 6 GSSMEPSADWLAT-AAA-----RGR-VEEVRALLEAG--ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCAD 74 (156)
T ss_dssp ----CCSTTHHHH-HHH-----HTC-HHHHHHHHTTT--CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCC
T ss_pred cCCCccchHHHHH-HHH-----cCC-HHHHHHHHHcC--CCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-CCCcC
Confidence 4456778999999 999 999 99999999999 999999999999999985 9999999999999999 89999
Q ss_pred CCCCc-HHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHHH
Q 004165 241 NEGTL-PVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLA 319 (770)
Q Consensus 241 ~~g~t-pL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa 319 (770)
..|.| |||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|+++. .+|..|.||.+-+.
T Consensus 75 ~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~~~~~~ 152 (156)
T 1bi7_B 75 PATLTRPVHDAAREGFLDTLVVLHRAGARLD-VRDAWGRLPVDLAEELGHRDVARYLRAAAGGTR-GSNHARIDAAEGPS 152 (156)
T ss_dssp TTTCCCHHHHHHHHTCHHHHHHHHHHTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHSSCC-------------------
T ss_pred CCCCcHHHHHHHHCCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCC-ccCcCcCcccccCC
Confidence 99999 9999999999999999999999999 599999999999999999999999999999988 88999999988544
No 84
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=2.8e-23 Score=195.85 Aligned_cols=141 Identities=18% Similarity=0.131 Sum_probs=118.2
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCC
Q 004165 131 YGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGR 210 (770)
Q Consensus 131 ~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~ 210 (770)
..|.||||+|+..|+.+++++|+. .+.+++.+|..|+||||+ | . .|+ .+++++|++.| ++++.+|..|.
T Consensus 10 ~~~~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~-A-~-----~~~-~~~v~~Ll~~g--~~~~~~d~~g~ 78 (156)
T 1bi7_B 10 EPSADWLATAAARGRVEEVRALLE-AGANPNAPNSYGRRPIQV-M-M-----MGS-ARVAELLLLHG--AEPNCADPATL 78 (156)
T ss_dssp CCSTTHHHHHHHHTCHHHHHHHHT-TTCCTTCCCSSSCCTTTS-S-C-----TTC-HHHHHHHHTTT--CCCCCCCTTTC
T ss_pred ccchHHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHH-H-H-----cCC-HHHHHHHHHcC--CCCCCcCCCCC
Confidence 448999999999999999998875 588999999999999999 8 5 689 99999999999 99999999999
Q ss_pred c-HHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHH
Q 004165 211 T-ALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANL 284 (770)
Q Consensus 211 T-~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A 284 (770)
| |||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||.+.+
T Consensus 79 ttpL~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 79 TRPVHDAAREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTR-GSNHARIDAAEGP 151 (156)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------------------
T ss_pred cHHHHHHHHCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCC-ccCcCcCcccccC
Confidence 9 99999999999999999999999 89999999999999999999999999999999998 5999999998743
No 85
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.88 E-value=4e-22 Score=180.08 Aligned_cols=126 Identities=27% Similarity=0.389 Sum_probs=121.5
Q ss_pred CCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCc
Q 004165 166 GHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTL 245 (770)
Q Consensus 166 ~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~t 245 (770)
+|+||||+ |+. .|+ .+++++|++.| ++++.+|..|.||||+|+..|+.+++++|++.+++ ++.+|..|.|
T Consensus 1 ~g~t~L~~-A~~-----~~~-~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t 70 (126)
T 1n0r_A 1 NGRTPLHL-AAR-----NGH-LEVVKLLLEAG--ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRT 70 (126)
T ss_dssp CCCCHHHH-HHH-----HTC-HHHHHHHHHHT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred CCccHHHH-HHH-----cCc-HHHHHHHHHcC--CCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCc
Confidence 47899999 999 999 99999999999 89999999999999999999999999999999999 8999999999
Q ss_pred HHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCC
Q 004165 246 PVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPT 302 (770)
Q Consensus 246 pL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~ 302 (770)
|||+|+..|+.+++++|+++|++++ ..+..|.||||+|+..|+.+++++|+++|++
T Consensus 71 ~l~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 71 PLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHcChHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999999999988 5999999999999999999999999999875
No 86
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.87 E-value=4.1e-22 Score=183.16 Aligned_cols=126 Identities=19% Similarity=0.149 Sum_probs=119.0
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCC-C
Q 004165 131 YGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRH-G 209 (770)
Q Consensus 131 ~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~-g 209 (770)
..|.||||+|+..|+.+++++|++ .+.+++.+|..|+||||+ |+. |+ .+++++|+++| ++++.+|.. |
T Consensus 10 ~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~-A~~------~~-~~~v~~Ll~~g--~~~~~~~~~~g 78 (136)
T 1d9s_A 10 GSSDAGLATAAARGQVETVRQLLE-AGADPNALNRFGRRPIQV-MMM------GS-AQVAELLLLHG--AEPNCADPATL 78 (136)
T ss_dssp CCCSCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCTTTTT-STT------SC-HHHHHHHHHHT--CCSSCCBTTTT
T ss_pred CCCccHHHHHHHcCCHHHHHHHHH-cCCCcCCcCCCCCCHHHH-HHc------CC-HHHHHHHHHCC--CCCCCcCCCCC
Confidence 459999999999999999998875 588999999999999999 876 77 99999999999 999999999 9
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCC
Q 004165 210 RTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHG 268 (770)
Q Consensus 210 ~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 268 (770)
.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 79 TRPVHDAAREGFLDTLVVLHRAGAR-LDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTCCC-CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999 899999999999999999999999999999875
No 87
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=4.4e-22 Score=182.94 Aligned_cols=123 Identities=21% Similarity=0.172 Sum_probs=87.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcH
Q 004165 133 RYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTA 212 (770)
Q Consensus 133 g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~ 212 (770)
+.||||+|+..|+.++++.|++ .+.+++.+|..|.||||+ |+. .|+ .+++++|++.| ++++.+|..|.||
T Consensus 14 ~~t~l~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~-A~~-----~~~-~~~v~~Ll~~g--~~~~~~d~~g~t~ 83 (136)
T 2jab_A 14 LGKKLLEAARAGQDDEVRILMA-NGADVNAKDEYGLTPLYL-ATA-----HGH-LEIVEVLLKNG--ADVNAVDAIGFTP 83 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHH-HHH-----HTC-HHHHHHHHHTT--CCTTCCCTTCCCH
T ss_pred ccHHHHHHHHhCCHHHHHHHHH-cCCCCCCcCCCCCCHHHH-HHH-----cCC-HHHHHHHHHcC--CCCCcCCCCCCCH
Confidence 5677777777777777775554 366677777777777777 777 777 77777777777 6777777777777
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhc
Q 004165 213 LHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKET 266 (770)
Q Consensus 213 Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~ 266 (770)
||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.|
T Consensus 84 L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 84 LHLAAFIGHLEIAEVLLKHGAD-VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 7777777777777777777777 6777777777777777777777777776653
No 88
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.87 E-value=1e-21 Score=177.34 Aligned_cols=126 Identities=25% Similarity=0.362 Sum_probs=120.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCc
Q 004165 132 GRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRT 211 (770)
Q Consensus 132 ~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T 211 (770)
+|+||||.|+..|+.+++++|+.. +.+++..+..|.||||+ |+. .|+ .+++++|++.| ++++.+|..|.|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~-A~~-----~~~-~~~~~~Ll~~g--~~~~~~~~~g~t 70 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHL-AAR-----NGH-LEVVKLLLEAG--ADVNAKDKNGRT 70 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTSCCHHHH-HHH-----HTC-HHHHHHHHHTT--CCTTCCCTTSCC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCcHHHH-HHH-----cCc-HHHHHHHHHcC--CCCcccCCCCCc
Confidence 388999999999999999988865 78899999999999999 999 999 99999999999 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCC
Q 004165 212 ALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHG 268 (770)
Q Consensus 212 ~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 268 (770)
|||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 71 ~l~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 71 PLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHcChHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999 899999999999999999999999999999874
No 89
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.87 E-value=1.1e-22 Score=197.39 Aligned_cols=156 Identities=8% Similarity=0.029 Sum_probs=134.3
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhccccccccccccCCCCcHHHHHHHcCCH----HHHHHHHhhCCcccccccCCCCCHHH
Q 004165 97 LCRMIEINDRQGAEDLVKEVKEAKSSEDAQRDEYYGRYWPLYKMTQKNDW----RGVEDFVGEHPDALTDKIDGHKTIFH 172 (770)
Q Consensus 97 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~----~~v~~LL~~~~~~~~~~d~~g~t~Lh 172 (770)
|+.|++.|+.+.+..+++. +.+...+..|+||||+|+..|+. ++++.|| +.|+++|.+|..|+||||
T Consensus 10 l~~Aa~~g~~~~~~~l~~~--------~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll-~~Gadvn~~d~~g~TpLh 80 (186)
T 3t8k_A 10 VSAAAMLGTYEDFLELFEK--------GYEDKESVLKSNILYDVLRNNNDEARYKISMFLI-NKGADIKSRTKEGTTLFF 80 (186)
T ss_dssp HHHHHHHSCHHHHHHHHHH--------SSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHH-HTTCCSSCCCTTCCCTHH
T ss_pred HHHHHHcCCHHHHHHHHhc--------CcccccccCCCCHHHHHHHcCCcchHHHHHHHHH-HCCCCCCCCCCCCCcHHH
Confidence 9999999999999888843 22222334599999999999986 4888666 679999999999999999
Q ss_pred HHHhccccccCCc-----hHHHHHHHHHcCChhhhccccCCCC-cHHHHHHHcC-----CHHHHHHHHh-cCCCCccCCC
Q 004165 173 LIAMLLVDVESDE-----GTCLVDNLASIVVPEALARQNRHGR-TALHFCAAKG-----NLKAIKVLMK-YKPDLTNVRD 240 (770)
Q Consensus 173 ~~A~~~~~~~~g~-----~~~iv~~Ll~~~~~~~~~~~d~~g~-T~Lh~A~~~g-----~~~iv~~Ll~-~~~~l~~~~d 240 (770)
+ |+. .++ ..+++++|+++| +++|.+|..|+ ||||+|+..| +.+++++|++ +|++ ++.+|
T Consensus 81 ~-a~~-----~~~~~~~~~~~iv~~Ll~~G--adin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad-~~~~d 151 (186)
T 3t8k_A 81 P-LFQ-----GGGNDITGTTELCKIFLEKG--ADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ-LLIKD 151 (186)
T ss_dssp H-HHH-----HCTTCHHHHHHHHHHHHHTT--CCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC-TTCCC
T ss_pred H-HHH-----cCCcchhhHHHHHHHHHHCC--CCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC-CcccC
Confidence 9 998 664 157899999999 99999999999 9999999954 4679999999 9999 89999
Q ss_pred CCCCcHHHHHHHcCChhHHHHHHhhcCCCC
Q 004165 241 NEGTLPVQLAALYGHKDTFQYLLKETHGVD 270 (770)
Q Consensus 241 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~ 270 (770)
..|.||||+|+..|+.+++++|.+.....+
T Consensus 152 ~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~ 181 (186)
T 3t8k_A 152 KWGLTALEFVKRCQKPIALKMMEDYIKKYN 181 (186)
T ss_dssp TTSCCHHHHHHTTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999998754333
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=5.6e-22 Score=182.25 Aligned_cols=125 Identities=26% Similarity=0.259 Sum_probs=119.2
Q ss_pred CCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCC
Q 004165 165 DGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGT 244 (770)
Q Consensus 165 ~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~ 244 (770)
..+.||||+ |+. .|+ .+++++|++.| ++++.+|..|.||||+|+..|+.+++++|++.|++ ++.+|..|.
T Consensus 12 ~~~~t~l~~-A~~-----~g~-~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~ 81 (136)
T 2jab_A 12 SDLGKKLLE-AAR-----AGQ-DDEVRILMANG--ADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-VNAVDAIGF 81 (136)
T ss_dssp CHHHHHHHH-HHH-----HTC-HHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCC
T ss_pred ccccHHHHH-HHH-----hCC-HHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCC
Confidence 445899999 999 999 99999999999 99999999999999999999999999999999999 899999999
Q ss_pred cHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhC
Q 004165 245 LPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLH 300 (770)
Q Consensus 245 tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~ 300 (770)
||||+|+..|+.+++++|+++|++++ ..|.+|.||||+|+..|+.+++++|++.|
T Consensus 82 t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 82 TPLHLAAFIGHLEIAEVLLKHGADVN-AQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCc-CcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999988 59999999999999999999999999875
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=2.3e-22 Score=185.03 Aligned_cols=132 Identities=20% Similarity=0.154 Sum_probs=118.9
Q ss_pred cccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcc
Q 004165 158 DALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTN 237 (770)
Q Consensus 158 ~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~ 237 (770)
.++ .+|..|+||||+ |+. .|+ .+++++|++.| ++++.+|..|.||||+|+..|+.+++++|++.+++ ++
T Consensus 2 ~d~-~~~~~g~t~L~~-A~~-----~~~-~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~ 70 (137)
T 3c5r_A 2 IDP-FTNHRGETLLHI-ASI-----KGD-IPSVEYLLQNG--SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL-VN 70 (137)
T ss_dssp --C-CCCTTCCCHHHH-HHH-----HTC-HHHHHHHHHTT--CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TT
T ss_pred CCC-CcCCCCCCHHHH-HHH-----cCC-HHHHHHHHHcC--CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-cc
Confidence 455 678889999999 999 999 99999999999 89999999999999999999999999999999999 89
Q ss_pred CCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCC
Q 004165 238 VRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHP 301 (770)
Q Consensus 238 ~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~ 301 (770)
.+|..|.||||+|+..|+.+++++|+++|++++ ..|..|.||||+|+..+..+++++|.+..+
T Consensus 71 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 71 TTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRN-AVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp CCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 999999999999999999999999999999998 599999999999999999999988877654
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=6.1e-23 Score=199.17 Aligned_cols=114 Identities=17% Similarity=0.128 Sum_probs=106.9
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccC-CCCchHHHH
Q 004165 205 QNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSG-NDGALVLAN 283 (770)
Q Consensus 205 ~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~t~Lh~ 283 (770)
.+..|.||||.|+..|+.++++.|++ +++ ++.+|..|.||||+|+..|+.+++++|+++|++++. .+ .+|+||||+
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~~g~tpL~~ 116 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH-RDMRGGLTALHM 116 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCSSSSCCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCCHHHH
Confidence 35679999999999999999999999 888 899999999999999999999999999999999984 66 899999999
Q ss_pred HHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhCC
Q 004165 284 LIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKKP 322 (770)
Q Consensus 284 A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~~ 322 (770)
|+..|+.+++++|+++|+++. .+|.+|.||||+|++.+
T Consensus 117 A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 117 AAGYVRPEVVEALVELGADIE-VEDERGLTALELAREIL 154 (183)
T ss_dssp HHHTTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHcCCCCc-CCCCCCCCHHHHHHHhc
Confidence 999999999999999999988 89999999999998654
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.86 E-value=6.8e-23 Score=208.57 Aligned_cols=139 Identities=14% Similarity=0.086 Sum_probs=119.5
Q ss_pred CCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcH
Q 004165 167 HKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLP 246 (770)
Q Consensus 167 g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tp 246 (770)
+.+++.+ ++. .|+ .+.+..+...+ .+ .+..|.||||+|++.|+.++++.|++ +++ ++.+|..|.||
T Consensus 15 ~~~~~l~-~~~-----~g~-~~~~~~~~~~~--~~---~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~ 80 (244)
T 3ui2_A 15 GAMEYLI-EWK-----DGH-SPSWVPSSYIA--AD---VVSEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTA 80 (244)
T ss_dssp TEEEEEE-EES-----SCC-CCEEEEGGGSC--HH---HHHHHHHHHHHHHTTTCHHHHHHTTT-TCC-TTCBCTTSCBH
T ss_pred CccHHHH-HHH-----cCC-Ccccccccccc--cc---cccCCCCHHHHHHHcCCHHHHHHHHc-CCC-CCCcCCCCCCH
Confidence 4566666 666 676 55554444444 33 34578999999999999999999999 888 89999999999
Q ss_pred HHHHHHcCChhHHHHHHhhcCCCCcccC-CCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHHHhC
Q 004165 247 VQLAALYGHKDTFQYLLKETHGVDIYSG-NDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTLAKK 321 (770)
Q Consensus 247 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~Aa~~ 321 (770)
||+|+..|+.+++++|+++|++++. .+ ..|.||||+|+..|+.+++++|+++|+++. .+|.+|.||||+|+..
T Consensus 81 L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~t~l~~A~~~ 154 (244)
T 3ui2_A 81 LLFVAGLGSDKCVRLLAEAGADLDH-RDMRGGLTALHMAAGYVRPEVVEALVELGADIE-VEDERGLTALELAREI 154 (244)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTC-CCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCCc-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHHH
Confidence 9999999999999999999999984 66 889999999999999999999999999988 8999999999999854
No 94
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.85 E-value=2.5e-21 Score=187.72 Aligned_cols=138 Identities=18% Similarity=0.127 Sum_probs=128.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhcccc-CCCC
Q 004165 132 GRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQN-RHGR 210 (770)
Q Consensus 132 ~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d-~~g~ 210 (770)
.|.||||+|+..|+.++++.|+. +.+++.+|..|+||||+ |+. .|+ .+++++|+++| ++++.+| ..|+
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~-A~~-----~~~-~~~v~~Ll~~g--a~~~~~~~~~g~ 111 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLF-VAG-----LGS-DKCVRLLAEAG--ADLDHRDMRGGL 111 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHH-HHH-----HTC-HHHHHHHHHTT--CCTTCCCSSSSC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHH-HHH-----cCC-HHHHHHHHHcC--CCCCcCCCCCCC
Confidence 48899999999999999998886 88999999999999999 999 999 99999999999 9999988 8899
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchH
Q 004165 211 TALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLY 290 (770)
Q Consensus 211 T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~ 290 (770)
||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++ ...+.+||++|+..|+.
T Consensus 112 tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~------------------~~~~~~~l~~a~~~~~~ 172 (183)
T 3deo_A 112 TALHMAAGYVRPEVVEALVELGAD-IEVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIGLE 172 (183)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHHH------------------TCCCCSHHHHHHHHHHH
T ss_pred CHHHHHHhcCcHHHHHHHHHcCCC-CcCCCCCCCCHHHHHHHhcc------------------CcccccHHHHHHHcCHH
Confidence 999999999999999999999999 89999999999999987432 23567999999999999
Q ss_pred HHHHHHHhh
Q 004165 291 DVALDLLKL 299 (770)
Q Consensus 291 ~iv~~Ll~~ 299 (770)
+++++|.++
T Consensus 173 ~i~~~L~~~ 181 (183)
T 3deo_A 173 KVINVLEGQ 181 (183)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 999999875
No 95
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=2.2e-21 Score=197.44 Aligned_cols=141 Identities=18% Similarity=0.110 Sum_probs=130.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhcccc-CCCC
Q 004165 132 GRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQN-RHGR 210 (770)
Q Consensus 132 ~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d-~~g~ 210 (770)
.|.||||+|+..|+.++++.|+. +.+++.+|..|.||||+ |+. .|+ .++|++|+++| ++++.+| ..|.
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~g--a~~~~~~~~~g~ 112 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLF-VAG-----LGS-DKCVRLLAEAG--ADLDHRDMRGGL 112 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHH-HHH-----HTC-HHHHHHHHHTT--CCTTCCCSSSCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHH-HHH-----CCC-HHHHHHHHHcC--CCCCcCCCCCCC
Confidence 48899999999999999998886 88999999999999999 999 999 99999999999 9999998 7899
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchH
Q 004165 211 TALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLY 290 (770)
Q Consensus 211 T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~ 290 (770)
||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..+ ....+.||||+|+..|+.
T Consensus 113 t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~~~------------------~~~~~~~~l~~a~~~g~~ 173 (244)
T 3ui2_A 113 TALHMAAGYVRPEVVEALVELGAD-IEVEDERGLTALELAREIL------------------KTTPKGNPMQFGRRIGLE 173 (244)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHH------------------TTCCCSSHHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHHH------------------hccCCCCHHHHHHHcChH
Confidence 999999999999999999999999 8999999999999998632 335689999999999999
Q ss_pred HHHHHHHhhCCC
Q 004165 291 DVALDLLKLHPT 302 (770)
Q Consensus 291 ~iv~~Ll~~~~~ 302 (770)
+++++|++...+
T Consensus 174 ~iv~~L~~~~~~ 185 (244)
T 3ui2_A 174 KVINVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHHHEE
T ss_pred HHHHHHHHhccc
Confidence 999999997544
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.85 E-value=3.9e-21 Score=201.55 Aligned_cols=140 Identities=19% Similarity=0.178 Sum_probs=122.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCCccccc------ccCCCCCHHHHHHhccccccC---CchHHHHHHHHHcCChhhhc
Q 004165 133 RYWPLYKMTQKNDWRGVEDFVGEHPDALTD------KIDGHKTIFHLIAMLLVDVES---DEGTCLVDNLASIVVPEALA 203 (770)
Q Consensus 133 g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~------~d~~g~t~Lh~~A~~~~~~~~---g~~~~iv~~Ll~~~~~~~~~ 203 (770)
+.++|+.|+..|+.+.++.|+ ..+.+++. .+..|.||||+ |+. . |+ .+++++|+++| ++++
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll-~~g~d~~~~~~~~~~~~~g~t~Lh~-A~~-----~~~~~~-~~iv~~Ll~~g--advn 220 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAF-ANGQDFGQPLPGPDAQAPEELVLHL-AVK-----VANQAS-LPLVDFIIQNG--GHLD 220 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHH-HTTCCTTSCEECSSSCSCEECHHHH-HHH-----TCCTTT-HHHHHHHHHHS--SCTT
T ss_pred hHHHHhhhhhccCHHHHHHHH-hcCCcccccCCCcccCCCCccHHHH-HHH-----hcccCc-HHHHHHHHhcC--CCCC
Confidence 457899999999999999887 56788887 68889999999 998 7 88 99999999999 9999
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHH
Q 004165 204 RQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLAN 283 (770)
Q Consensus 204 ~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~ 283 (770)
.+|..|+||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++ .|.||||+
T Consensus 221 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~ 292 (301)
T 2b0o_E 221 AKAADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHV 292 (301)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC-
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHH
Confidence 9999999999999999999999999999999 899999999999999999999999999999753 57899999
Q ss_pred HHHhchH
Q 004165 284 LIHARLY 290 (770)
Q Consensus 284 A~~~~~~ 290 (770)
|+..|+.
T Consensus 293 A~~~g~~ 299 (301)
T 2b0o_E 293 DYSWVIS 299 (301)
T ss_dssp -------
T ss_pred HHhcCCc
Confidence 9998864
No 97
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.84 E-value=1.5e-21 Score=179.61 Aligned_cols=128 Identities=19% Similarity=0.108 Sum_probs=116.4
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCC
Q 004165 129 EYYGRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRH 208 (770)
Q Consensus 129 ~~~~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~ 208 (770)
.+..|+||||+|+..|+.+++++|+. .+.+++.+|..|.||||+ |+. .|+ .+++++|++.| ++++.+|..
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~-A~~-----~~~-~~~~~~Ll~~g--~~~~~~~~~ 75 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQ-NGSDPNVKDHAGWTPLHE-ACN-----HGH-LKVVELLLQHK--ALVNTTGYQ 75 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCCTTSCCHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCGG
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCcCCCCCCCHHHH-HHH-----cCC-HHHHHHHHHcC--CcccCcCCC
Confidence 44569999999999999999997775 588999999999999999 999 999 99999999999 999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcC
Q 004165 209 GRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETH 267 (770)
Q Consensus 209 g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 267 (770)
|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..+..+++++|.+.++
T Consensus 76 g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 76 NDSPLHDAAKNGHVDIVKLLLSYGAS-RNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 99999999999999999999999999 89999999999999999999999988876643
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.84 E-value=5.5e-21 Score=172.20 Aligned_cols=119 Identities=21% Similarity=0.255 Sum_probs=97.4
Q ss_pred cCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCC
Q 004165 164 IDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEG 243 (770)
Q Consensus 164 d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g 243 (770)
+..|.||||+ |+. .|+ .+++++|++.| ++++.+|..|+||||+|+..|+.+++++|++.|++ ++.+|..|
T Consensus 4 ~~~~~~~l~~-A~~-----~~~-~~~v~~ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g 73 (123)
T 3aaa_C 4 GSMCDKEFMW-ALK-----NGD-LDEVKDYVAKG--EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHH 73 (123)
T ss_dssp ---CHHHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTS
T ss_pred ccccchHHHH-HHH-----cCC-HHHHHHHHHcC--CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCC
Confidence 3456788888 888 888 88888888888 78888888888888888888888888888888888 78888888
Q ss_pred CcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHH
Q 004165 244 TLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVA 293 (770)
Q Consensus 244 ~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv 293 (770)
.||||+|+..|+.+++++|+++|++++ ..+.+|.||||+|...+..+++
T Consensus 74 ~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~~ll 122 (123)
T 3aaa_C 74 ITPLLSAVYEGHVSCVKLLLSKGADKT-VKGPDGLTAFEATDNQAIKALL 122 (123)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHCCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHhCCHHHHHHh
Confidence 888888888888888888888888887 4888888888888655554443
No 99
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.83 E-value=2.9e-21 Score=193.54 Aligned_cols=137 Identities=15% Similarity=0.125 Sum_probs=116.4
Q ss_pred ccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhc-CCCCccCCCC
Q 004165 163 KIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKY-KPDLTNVRDN 241 (770)
Q Consensus 163 ~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~-~~~l~~~~d~ 241 (770)
.+..|.||||+ |+. .|+ .+++++|++.| ++++.+|..|+||||+||..|+.+++++|++. +++ ++.+|.
T Consensus 69 ~~~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~d~ 138 (222)
T 3ehr_A 69 QAESIDNPLHE-AAK-----RGN-LSWLRECLDNR--VGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-LNQQNK 138 (222)
T ss_dssp HEEEESCHHHH-HHH-----HTC-HHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-CCCCCT
T ss_pred ccccccccccc-ccc-----cCc-HHHHHHHHhCC--CCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-ccccCC
Confidence 35667999999 999 999 99999999999 99999999999999999999999999999999 888 899999
Q ss_pred CCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCC
Q 004165 242 EGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSR 311 (770)
Q Consensus 242 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g 311 (770)
.|.||||+|+..|+.+++++|+++|++++ ..+.+|.||||+|+..++.++++.|++.++... ..|.+|
T Consensus 139 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~-~~~~~~ 206 (222)
T 3ehr_A 139 LGDTALHAAAWKGYADIVQLLLAKGARTD-LRNIEKKLAFDMATNAACASLLKKKQGTDAVRT-LSNAED 206 (222)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHHTCCSC-CCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCc-cccCCCCCHHHHhcchhHHHHHHHHhccchhhh-ccchhh
Confidence 99999999999999999999999999999 599999999999999999999999999988765 444433
No 100
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.83 E-value=7.8e-21 Score=199.25 Aligned_cols=139 Identities=14% Similarity=0.117 Sum_probs=124.5
Q ss_pred CCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhcc------ccCCCCcHHHHHHHc---CCHHHHHHHHhcCCCCcc
Q 004165 167 HKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALAR------QNRHGRTALHFCAAK---GNLKAIKVLMKYKPDLTN 237 (770)
Q Consensus 167 g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~------~d~~g~T~Lh~A~~~---g~~~iv~~Ll~~~~~l~~ 237 (770)
..++||. |+. .|+ .+.++.|++.| ++++. .|..|.||||+|+.. |+.+++++|+++|++ ++
T Consensus 151 ~~~~L~~-A~~-----~g~-~~~v~~ll~~g--~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-vn 220 (301)
T 2b0o_E 151 EPQRLWT-AIC-----NRD-LLSVLEAFANG--QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LD 220 (301)
T ss_dssp CHHHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-TT
T ss_pred hHHHHhh-hhh-----ccC-HHHHHHHHhcC--CcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-CC
Confidence 3578999 999 999 99999999999 88887 688999999999997 899999999999999 89
Q ss_pred CCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHH
Q 004165 238 VRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKT 317 (770)
Q Consensus 238 ~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~ 317 (770)
.+|..|.||||+|+..|+.+++++|+++|++++ ..|.+|.||||+|+..|+.+++++|++++++ .|.||||+
T Consensus 221 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~ 292 (301)
T 2b0o_E 221 AKAADGNTALHYAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHV 292 (301)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCS-CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC-
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHH
Confidence 999999999999999999999999999999999 5999999999999999999999999998764 58999999
Q ss_pred HHhCCC
Q 004165 318 LAKKPY 323 (770)
Q Consensus 318 Aa~~~~ 323 (770)
|+..+.
T Consensus 293 A~~~g~ 298 (301)
T 2b0o_E 293 DYSWVI 298 (301)
T ss_dssp ------
T ss_pred HHhcCC
Confidence 998873
No 101
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.82 E-value=1.7e-20 Score=168.95 Aligned_cols=112 Identities=15% Similarity=0.215 Sum_probs=104.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCc
Q 004165 132 GRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRT 211 (770)
Q Consensus 132 ~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T 211 (770)
.|.||||+|+..|+.++++.|+. .+.+++.+|..|+||||+ |+. .|+ .+++++|++.| ++++.+|..|+|
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~-~~~~~~~~~~~g~t~L~~-A~~-----~~~-~~~v~~Ll~~g--~~~~~~d~~g~t 75 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVA-KGEDVNRTLEGGRKPLHY-AAD-----CGQ-LEILEFLLLKG--ADINAPDKHHIT 75 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHH-TTCCTTSCCTTSSCHHHH-HHH-----TTC-HHHHHHHHTTT--CCTTCCCTTSCC
T ss_pred ccchHHHHHHHcCCHHHHHHHHH-cCCCcCccCCCCCcHHHH-HHH-----cCC-HHHHHHHHHcC--CCCCcCCCCCCC
Confidence 37899999999999999998775 578999999999999999 999 999 99999999999 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcC
Q 004165 212 ALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYG 254 (770)
Q Consensus 212 ~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g 254 (770)
|||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..+
T Consensus 76 pL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 76 PLLSAVYEGHVSCVKLLLSKGAD-KTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHhCCHH
Confidence 99999999999999999999999 8999999999999994433
No 102
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.81 E-value=3.4e-19 Score=184.59 Aligned_cols=126 Identities=24% Similarity=0.376 Sum_probs=115.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhhCCcc------cccccCCCCCHHHHHHhccccccC---CchHHHHHHHHHcCChhhhc
Q 004165 133 RYWPLYKMTQKNDWRGVEDFVGEHPDA------LTDKIDGHKTIFHLIAMLLVDVES---DEGTCLVDNLASIVVPEALA 203 (770)
Q Consensus 133 g~t~L~~A~~~g~~~~v~~LL~~~~~~------~~~~d~~g~t~Lh~~A~~~~~~~~---g~~~~iv~~Ll~~~~~~~~~ 203 (770)
..++|+.|+..|+.+.++.++.. +.+ ++..|..|.||||+ |+. . |+ .+++++|+++| ++++
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~-g~~~~~~~~l~~~~~~g~t~Lh~-A~~-----~~~~~~-~~~v~~Ll~~g--a~in 199 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYAD-GVDLTEKIPLANGHEPDETALHL-AVR-----SVDRTS-LHIVDFLVQNS--GNLD 199 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHT-TCCTTSBCCCSSCSSTTCBHHHH-HHH-----HCCTTT-HHHHHHHHHHC--SCTT
T ss_pred hhhhhhhHhhhcccHHHHHHHHh-hcchhhhccccccccCCCCcchH-HHH-----hcccch-HHHHHHHHHCC--CCcc
Confidence 45789999999999999987755 555 45557889999999 999 8 89 99999999999 9999
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCC
Q 004165 204 RQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGV 269 (770)
Q Consensus 204 ~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 269 (770)
.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus 200 ~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 200 KQTGKGSTALHYCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999 8999999999999999999999999999998754
No 103
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.81 E-value=1.8e-20 Score=187.73 Aligned_cols=129 Identities=18% Similarity=0.165 Sum_probs=113.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhhCCcccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHc-CChhhhccccCCCC
Q 004165 132 GRYWPLYKMTQKNDWRGVEDFVGEHPDALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASI-VVPEALARQNRHGR 210 (770)
Q Consensus 132 ~g~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~-~~~~~~~~~d~~g~ 210 (770)
.|.||||+||..|+.++++.|+. .+.+++.+|..|+||||+ |+. .|+ .++|++|++. | ++++.+|..|+
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~-A~~-----~~~-~~~v~~Ll~~~g--~~~~~~d~~g~ 141 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLD-NRVGVNGLDKAGSTALYW-ACH-----GGH-KDIVEMLFTQPN--IELNQQNKLGD 141 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHH-HHH-----TTC-HHHHHHHTTSTT--CCCCCCCTTSC
T ss_pred ccccccccccccCcHHHHHHHHh-CCCCccccCCCCCCHHHH-HHH-----cCC-HHHHHHHHcCCC--CCccccCCCCC
Confidence 38899999999999999998775 688999999999999999 999 999 9999999999 7 99999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCc
Q 004165 211 TALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDI 271 (770)
Q Consensus 211 T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~ 271 (770)
||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.++++.|++.++...+
T Consensus 142 tpL~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~ 201 (222)
T 3ehr_A 142 TALHAAAWKGYADIVQLLLAKGAR-TDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTL 201 (222)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCC-SCCCCTTSCCHHHHCCSHHHHHHHC-----------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCC-CccccCCCCCHHHHhcchhHHHHHHHHhccchhhhc
Confidence 999999999999999999999999 899999999999999999999999999999887764
No 104
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.79 E-value=8e-19 Score=197.68 Aligned_cols=136 Identities=19% Similarity=0.175 Sum_probs=116.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHhhCCcccccc------cCCCCCHHHHHH---hccccccCCchHHHHHHHHHcCChhhhcc
Q 004165 134 YWPLYKMTQKNDWRGVEDFVGEHPDALTDK------IDGHKTIFHLIA---MLLVDVESDEGTCLVDNLASIVVPEALAR 204 (770)
Q Consensus 134 ~t~L~~A~~~g~~~~v~~LL~~~~~~~~~~------d~~g~t~Lh~~A---~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~ 204 (770)
.+.||.|+..|+.+.++.||. .+.+++.. |..|.||||+ | +. .|+ .++|++|+++| +++|.
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~-~g~~~n~~~~~~~~~~~g~t~Lh~-A~~~a~-----~g~-~~~v~~Ll~~g--a~vn~ 202 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFA-NGQDFGQPLPGPDAQAPEELVLHL-AVKVAN-----QAS-LPLVDFIIQNG--GHLDA 202 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHH-TTCCSSSCBCCSSSCCSCBCHHHH-HHHTCC-----TTT-HHHHHHHHHHS--CCTTC
T ss_pred HHHHHHHHhccCHHHHHHHHh-hcccccCCCCCcccccccchHHHH-HHHhcc-----ccc-HHHHHHHHHcC--CCCCc
Confidence 478999999999999998775 57888877 8889999999 9 66 899 99999999999 99999
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHH
Q 004165 205 QNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANL 284 (770)
Q Consensus 205 ~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A 284 (770)
+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++.+. +|+|.+
T Consensus 203 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~-------~~~h~~ 274 (497)
T 3lvq_E 203 KAADGNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA-------FPLHVD 274 (497)
T ss_dssp CCSSSCCHHHHHTTTTCHHHHHHHHHTCCC-CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------------
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC-------Ccceee
Confidence 999999999999999999999999999999 899999999999999999999999999999988763 688877
Q ss_pred HHh
Q 004165 285 IHA 287 (770)
Q Consensus 285 ~~~ 287 (770)
...
T Consensus 275 ~~~ 277 (497)
T 3lvq_E 275 YSW 277 (497)
T ss_dssp ---
T ss_pred ccc
Confidence 653
No 105
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.78 E-value=5.2e-19 Score=183.19 Aligned_cols=124 Identities=13% Similarity=0.137 Sum_probs=116.9
Q ss_pred CCHHHHHHhccccccCCchHHHHHHHHHcCChhh------hccccCCCCcHHHHHHHc---CCHHHHHHHHhcCCCCccC
Q 004165 168 KTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEA------LARQNRHGRTALHFCAAK---GNLKAIKVLMKYKPDLTNV 238 (770)
Q Consensus 168 ~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~------~~~~d~~g~T~Lh~A~~~---g~~~iv~~Ll~~~~~l~~~ 238 (770)
.++|+. |+. .|+ .+.++.+++.| .+ ++..|..|.||||+|+.. |+.+++++|+++|++ ++.
T Consensus 131 l~~l~~-a~~-----~~d-~~~~~~ll~~g--~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~ 200 (278)
T 1dcq_A 131 LHSLCE-AVK-----TRD-IFGLLQAYADG--VDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDK 200 (278)
T ss_dssp HHHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTC
T ss_pred hhhhhh-Hhh-----hcc-cHHHHHHHHhh--cchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccc
Confidence 579999 999 999 99999999999 66 455588899999999999 899999999999999 899
Q ss_pred CCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCC
Q 004165 239 RDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPT 302 (770)
Q Consensus 239 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~ 302 (770)
+|..|.||||+|+..|+.+++++|+++|++++ ..|.+|.||||+|+..|+.+++++|++++++
T Consensus 201 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 201 QTGKGSTALHYCCLTDNAECLKLLLRGKASIE-IANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999 5999999999999999999999999999875
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.78 E-value=4.4e-19 Score=190.23 Aligned_cols=146 Identities=15% Similarity=0.110 Sum_probs=119.1
Q ss_pred CCCCHHHHHHhccccccC-CchHHHHHHHHHcCChhhhcccc--CCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCC
Q 004165 166 GHKTIFHLIAMLLVDVES-DEGTCLVDNLASIVVPEALARQN--RHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNE 242 (770)
Q Consensus 166 ~g~t~Lh~~A~~~~~~~~-g~~~~iv~~Ll~~~~~~~~~~~d--~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~ 242 (770)
.+.|+||. |+. . |+ .++++.|++.| ++++..+ ..|.||||+|+..|+.+++++|+++|++ ++.+|..
T Consensus 198 ~~~t~L~~-Aa~-----~~g~-~~~v~~LL~~G--advn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-vn~~d~~ 267 (368)
T 3jue_A 198 HPGALLFR-ASG-----HPPS-LPTMADALAHG--ADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN-VNQADSA 267 (368)
T ss_dssp CHHHHHHH-HTS-----SSCC-HHHHHHHHHTT--CCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred CCCcHHHH-HHH-----ccCC-HHHHHHHHHcC--CCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCC
Confidence 34689999 999 9 99 99999999999 8999888 8899999999999999999999999999 8999999
Q ss_pred CCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcc--cCCCCCCCHHHHHHh
Q 004165 243 GTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGR--DNIDSRRIVLKTLAK 320 (770)
Q Consensus 243 g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~--~~d~~g~tpL~~Aa~ 320 (770)
|.||||+|+..|+.+++++|+++|++++ ..|.+|.||||+|+..++.+++++|++.+..... ..+..+.|+++++..
T Consensus 268 G~TpLh~A~~~g~~~~v~~LL~~Gad~~-~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~ 346 (368)
T 3jue_A 268 GRGPLHHATILGHTGLACLFLKRGADLG-ARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRD 346 (368)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------------------
T ss_pred CCCHHHHHHHcCcHHHHHHHHHCcCCCC-CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHH
Confidence 9999999999999999999999999999 5999999999999999999999999987643321 455678888887765
Q ss_pred CC
Q 004165 321 KP 322 (770)
Q Consensus 321 ~~ 322 (770)
..
T Consensus 347 ~~ 348 (368)
T 3jue_A 347 FS 348 (368)
T ss_dssp --
T ss_pred HH
Confidence 43
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.78 E-value=6.7e-19 Score=188.78 Aligned_cols=145 Identities=15% Similarity=0.113 Sum_probs=118.0
Q ss_pred CCcHHHHHHHc-CCHHHHHHHHhhCCccccccc--CCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCC
Q 004165 133 RYWPLYKMTQK-NDWRGVEDFVGEHPDALTDKI--DGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHG 209 (770)
Q Consensus 133 g~t~L~~A~~~-g~~~~v~~LL~~~~~~~~~~d--~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g 209 (770)
+.|+||.|+.. |+.++++.|+ ..+.+++..+ ..|.||||+ |+. .|+ .++|++|+++| ++++.+|..|
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL-~~Gadvn~~~~~~~g~TpLh~-Aa~-----~g~-~~iv~~LL~~G--advn~~d~~G 268 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADAL-AHGADVNWVNGGQDNATPLIQ-ATA-----ANS-LLACEFLLQNG--ANVNQADSAG 268 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHH-HTTCCTTCCCTTTTCCCHHHH-HHH-----TTC-HHHHHHHHHTT--CCTTCCCTTS
T ss_pred CCcHHHHHHHccCCHHHHHHHH-HcCCCCCccccccCCCCHHHH-HHH-----CCC-HHHHHHHHHcC--CCCCCCCCCC
Confidence 56899999999 9999999777 5689999998 788999999 999 999 99999999999 9999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCc--ccCCCCchHHHHHHHh
Q 004165 210 RTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDI--YSGNDGALVLANLIHA 287 (770)
Q Consensus 210 ~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~--~~~~~g~t~Lh~A~~~ 287 (770)
+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+..+..... ..+..+.|+++.+...
T Consensus 269 ~TpLh~A~~~g~~~~v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 269 RGPLHHATILGHTGLACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred CCHHHHHHHcCcHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 9999999999999999999999999 899999999999999999999999999988743322 4567788888876654
Q ss_pred c
Q 004165 288 R 288 (770)
Q Consensus 288 ~ 288 (770)
.
T Consensus 348 ~ 348 (368)
T 3jue_A 348 S 348 (368)
T ss_dssp -
T ss_pred H
Confidence 3
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.78 E-value=8.1e-19 Score=149.34 Aligned_cols=91 Identities=31% Similarity=0.498 Sum_probs=56.3
Q ss_pred CCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcH
Q 004165 167 HKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLP 246 (770)
Q Consensus 167 g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tp 246 (770)
|+||||+ |+. .|+ .+++++|++.| ++++.+|..|+||||+|+..|+.+++++|++.|++ ++.+|..|.||
T Consensus 2 g~t~L~~-A~~-----~~~-~~~v~~Ll~~g--~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~ 71 (93)
T 1n0q_A 2 GRTPLHL-AAR-----NGH-LEVVKLLLEAG--ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTP 71 (93)
T ss_dssp -CCHHHH-HHH-----HTC-HHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred CCcHHHH-HHH-----cCC-HHHHHHHHHcC--CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCH
Confidence 4566666 666 666 66666666666 56666666666666666666666666666666666 56666666666
Q ss_pred HHHHHHcCChhHHHHHHhhcC
Q 004165 247 VQLAALYGHKDTFQYLLKETH 267 (770)
Q Consensus 247 L~~A~~~g~~~~v~~Ll~~~~ 267 (770)
||+|+..|+.+++++|+++|+
T Consensus 72 l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 72 LHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp HHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHcCC
Confidence 666666666666666666554
No 109
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.78 E-value=1e-18 Score=148.67 Aligned_cols=93 Identities=30% Similarity=0.458 Sum_probs=88.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHh
Q 004165 208 HGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHA 287 (770)
Q Consensus 208 ~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~ 287 (770)
+|+||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..|.+|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHc
Confidence 489999999999999999999999999 89999999999999999999999999999999998 5999999999999999
Q ss_pred chHHHHHHHHhhCCC
Q 004165 288 RLYDVALDLLKLHPT 302 (770)
Q Consensus 288 ~~~~iv~~Ll~~~~~ 302 (770)
|+.+++++|+++|++
T Consensus 79 ~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 79 GHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 999999999999864
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.77 E-value=7.7e-19 Score=197.80 Aligned_cols=136 Identities=14% Similarity=0.122 Sum_probs=118.1
Q ss_pred CCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccc------cCCCCcHHHHHHH---cCCHHHHHHHHhcCCCCccC
Q 004165 168 KTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQ------NRHGRTALHFCAA---KGNLKAIKVLMKYKPDLTNV 238 (770)
Q Consensus 168 ~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~------d~~g~T~Lh~A~~---~g~~~iv~~Ll~~~~~l~~~ 238 (770)
.+.||. |+. .|+ .++|+.|++.| ++++.. |..|.||||+||. .|+.+++++|+++|++ ++.
T Consensus 133 ~~~L~~-A~~-----~g~-~~~v~~ll~~g--~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-vn~ 202 (497)
T 3lvq_E 133 PQRLWT-AIC-----NRD-LLSVLEAFANG--QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDA 202 (497)
T ss_dssp HHHHHH-HHH-----HTC-HHHHHHHHHTT--CCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-TTC
T ss_pred HHHHHH-HHh-----ccC-HHHHHHHHhhc--ccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-CCc
Confidence 468999 999 999 99999999999 888877 8899999999976 9999999999999999 899
Q ss_pred CCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHHHHHhchHHHHHHHHhhCCCCcccCCCCCCCHHHHH
Q 004165 239 RDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLANLIHARLYDVALDLLKLHPTIGRDNIDSRRIVLKTL 318 (770)
Q Consensus 239 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL~~A 318 (770)
+|..|.||||+|+..|+.+++++|+++|++++ ..|.+|.||||+|+..|+.+++++|+++|++... +|+|.+
T Consensus 203 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~-------~~~h~~ 274 (497)
T 3lvq_E 203 KAADGNTALHYAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIARKKHHKECEELLEQAQAGTFA-------FPLHVD 274 (497)
T ss_dssp CCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCS-CCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------------
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC-------Ccceee
Confidence 99999999999999999999999999999999 5999999999999999999999999999998762 688877
Q ss_pred HhC
Q 004165 319 AKK 321 (770)
Q Consensus 319 a~~ 321 (770)
...
T Consensus 275 ~~~ 277 (497)
T 3lvq_E 275 YSW 277 (497)
T ss_dssp ---
T ss_pred ccc
Confidence 643
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.74 E-value=1.7e-18 Score=153.72 Aligned_cols=109 Identities=22% Similarity=0.258 Sum_probs=101.7
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHHHH
Q 004165 204 RQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVLAN 283 (770)
Q Consensus 204 ~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~ 283 (770)
.+|..|+||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN-ARSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT-CCCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc-ccCCCCCCHHHH
Confidence 5788999999999999999999999999999 89999999999999999999999999999999988 599999999999
Q ss_pred HHHhchHHHHHHHHhhCCCCcccCCCCCCCHH
Q 004165 284 LIHARLYDVALDLLKLHPTIGRDNIDSRRIVL 315 (770)
Q Consensus 284 A~~~~~~~iv~~Ll~~~~~~~~~~d~~g~tpL 315 (770)
|+..++.+++++|+++|++++ .++..|.||-
T Consensus 82 A~~~~~~~~~~~Ll~~ga~~n-~~~~~~~~~~ 112 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGADVN-ARSWGSSHHH 112 (115)
T ss_dssp HHTTTCHHHHHHHHTTSSSHH-HHSCCCC---
T ss_pred HHHCCCHHHHHHHHHcCCCCC-cCCccccccc
Confidence 999999999999999999988 7888898874
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.73 E-value=2.4e-18 Score=152.72 Aligned_cols=109 Identities=23% Similarity=0.279 Sum_probs=101.4
Q ss_pred cccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCC
Q 004165 162 DKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDN 241 (770)
Q Consensus 162 ~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~ 241 (770)
.+|..|+||||+ |+. .|+ .+++++|++.| ++++.+|..|.||||+|+..|+.+++++|++.|++ ++.+|.
T Consensus 4 ~~d~~g~t~L~~-A~~-----~~~-~~~~~~Ll~~g--~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~ 73 (115)
T 2l6b_A 4 WGSKDGNTPLHN-AAK-----NGH-AEEVKKLLSKG--ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSK 73 (115)
T ss_dssp CCSCSSCCHHHH-HHH-----HTC-HHHHHHHTTTT--CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCT
T ss_pred ccCCCCCCHHHH-HHH-----cCC-HHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCC
Confidence 467889999999 999 999 99999999999 89999999999999999999999999999999999 899999
Q ss_pred CCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCchHH
Q 004165 242 EGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGALVL 281 (770)
Q Consensus 242 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 281 (770)
.|.||||+|+..|+.+++++|+++|++++ ..+..|.+|-
T Consensus 74 ~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n-~~~~~~~~~~ 112 (115)
T 2l6b_A 74 DGNTPEHLAKKNGHHEIVKLLDAKGADVN-ARSWGSSHHH 112 (115)
T ss_dssp TCCCTTHHHHTTTCHHHHHHHHTTSSSHH-HHSCCCC---
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCC-cCCccccccc
Confidence 99999999999999999999999999998 5888888873
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.63 E-value=6e-16 Score=136.02 Aligned_cols=95 Identities=23% Similarity=0.250 Sum_probs=85.1
Q ss_pred hhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccCCCCCCCcHHHHHHHcCChhHHHHHHhhcCCCCcccCCCCch
Q 004165 200 EALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNVRDNEGTLPVQLAALYGHKDTFQYLLKETHGVDIYSGNDGAL 279 (770)
Q Consensus 200 ~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t 279 (770)
......|.+|.||||+|+..|+.+++++|++.+++ ++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.|
T Consensus 15 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~t 92 (110)
T 2zgd_A 15 PRGSHMGSDLGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVX-AQDKFGKT 92 (110)
T ss_dssp -------CCHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCC
T ss_pred CcccccCCccchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccccCCCc
Confidence 34556788999999999999999999999999999 89999999999999999999999999999999988 59999999
Q ss_pred HHHHHHHhchHHHHHHH
Q 004165 280 VLANLIHARLYDVALDL 296 (770)
Q Consensus 280 ~Lh~A~~~~~~~iv~~L 296 (770)
|||+|+..|+.+++++|
T Consensus 93 pl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 93 AFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHh
Confidence 99999999999999976
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.63 E-value=4.3e-16 Score=136.93 Aligned_cols=94 Identities=20% Similarity=0.241 Sum_probs=85.7
Q ss_pred ccccccCCCCCHHHHHHhccccccCCchHHHHHHHHHcCChhhhccccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccC
Q 004165 159 ALTDKIDGHKTIFHLIAMLLVDVESDEGTCLVDNLASIVVPEALARQNRHGRTALHFCAAKGNLKAIKVLMKYKPDLTNV 238 (770)
Q Consensus 159 ~~~~~d~~g~t~Lh~~A~~~~~~~~g~~~~iv~~Ll~~~~~~~~~~~d~~g~T~Lh~A~~~g~~~iv~~Ll~~~~~l~~~ 238 (770)
.....|.+|.||||+ |+. .|+ .+++++|++.| ++++.+|..|+||||+|+..|+.+++++|+++|++ ++.
T Consensus 16 ~~~~~~~~g~t~L~~-A~~-----~g~-~~~v~~Ll~~g--~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-~~~ 85 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLE-AAR-----AGQ-DDEVRILMANG--ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD-VXA 85 (110)
T ss_dssp ------CCHHHHHHH-HHH-----HTC-HHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTC
T ss_pred cccccCCccchHHHH-HHH-----cCC-HHHHHHHHHcC--CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccc
Confidence 345567888999999 999 999 99999999999 99999999999999999999999999999999999 899
Q ss_pred CCCCCCcHHHHHHHcCChhHHHHH
Q 004165 239 RDNEGTLPVQLAALYGHKDTFQYL 262 (770)
Q Consensus 239 ~d~~g~tpL~~A~~~g~~~~v~~L 262 (770)
+|..|.||||+|+..|+.+++++|
T Consensus 86 ~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 86 QDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred cccCCCcHHHHHHHcCCHHHHHHh
Confidence 999999999999999999999987
No 115
>4dve_A Biotin transporter BIOY; ECF-transport, ligand-binding domain, biotin binding, membra transport protein; HET: BTN BNG; 2.09A {Lactococcus lactis subsp}
Probab=47.29 E-value=1.2e+02 Score=28.28 Aligned_cols=22 Identities=18% Similarity=0.203 Sum_probs=14.0
Q ss_pred hHHHHHHHHHHHHHhhhcCCCC
Q 004165 596 CSVVAALIITVVFAAAFTVPGG 617 (770)
Q Consensus 596 ~~vva~Liatv~faa~~t~Pgg 617 (770)
+.+.++|++-.++-+.+.+|.+
T Consensus 23 ~alfaAliavla~i~~Ipip~~ 44 (198)
T 4dve_A 23 SAFMTAFIIILGFLPGIPIGFI 44 (198)
T ss_dssp HHHHHHHHHHHTTSCCBCCSSS
T ss_pred HHHHHHHHHHHHHhccCCCCCC
Confidence 3556677666666666777743
No 116
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=46.77 E-value=19 Score=37.05 Aligned_cols=22 Identities=0% Similarity=-0.171 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHhHhhhc
Q 004165 679 VTLFFSIASMMVAFGATVHISL 700 (770)
Q Consensus 679 ~~l~~s~~~m~~af~~~~~~v~ 700 (770)
.+..+|+++|..+|++|+|=+-
T Consensus 281 ~LTiit~IflP~T~IaGiyGMN 302 (339)
T 4ev6_A 281 ILTMVTTIFAVPMWITGIYGMN 302 (339)
T ss_dssp HHHHHHHHSSHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHhhccCc
Confidence 3455788888999999999763
No 117
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=43.03 E-value=18 Score=37.64 Aligned_cols=21 Identities=19% Similarity=0.047 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHhHhhh
Q 004165 679 VTLFFSIASMMVAFGATVHIS 699 (770)
Q Consensus 679 ~~l~~s~~~m~~af~~~~~~v 699 (770)
.+..+|+++|..+|++|+|=+
T Consensus 305 ~LTiit~IflP~T~IaGiyGM 325 (363)
T 2iub_A 305 VLTIIATIFMPLTFIAGIYGM 325 (363)
T ss_dssp HHHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHHHHHHHHHhhhcc
Confidence 445688889999999999865
No 118
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=24.31 E-value=3.2e+02 Score=24.77 Aligned_cols=48 Identities=10% Similarity=0.007 Sum_probs=25.5
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhccccccccccccCCCCcHHHHHHHcCCHHHHHHHHhh
Q 004165 97 LCRMIEINDRQGAEDLVKEVKEAKSSEDAQRDEYYGRYWPLYKMTQKNDWRGVEDFVGE 155 (770)
Q Consensus 97 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~LL~~ 155 (770)
+-.|+..|+.+....+.+.+. ... .-...=..|...|+.++++..+.+
T Consensus 12 F~LAL~lg~l~~A~e~a~~l~-----~~~------~Wk~Lg~~AL~~gn~~lAe~cy~~ 59 (177)
T 3mkq_B 12 FDLALEYGNLDAALDEAKKLN-----DSI------TWERLIQEALAQGNASLAEMIYQT 59 (177)
T ss_dssp HHHHHHTTCHHHHHHHHHHHC-----CHH------HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHHHhC-----CHH------HHHHHHHHHHHcCChHHHHHHHHH
Confidence 566677777777666664431 000 011222345566777777766654
No 119
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=24.19 E-value=1.2e+02 Score=31.04 Aligned_cols=55 Identities=7% Similarity=-0.046 Sum_probs=31.4
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhccccccccccccCCCCcHHHHHHHcCCHHHHHHHHhh
Q 004165 97 LCRMIEINDRQGAEDLVKEVKEAKSSEDAQRDEYYGRYWPLYKMTQKNDWRGVEDFVGE 155 (770)
Q Consensus 97 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~LL~~ 155 (770)
|......++.+....+++++.. .-...-.+..|+..+......|+.+....++..
T Consensus 41 lQ~~l~~~~~~~~~~i~~ei~~----~~~~L~~d~~gn~vvQklle~~~~~~~~~i~~~ 95 (351)
T 3gvo_A 41 IQQKLERATPAERQIVFNEILQ----AAYQLMTDVFGNYVIQKFFEFGSLDQKLALATR 95 (351)
T ss_dssp HHHHHHHCCHHHHHHHHHHHGG----GHHHHHTSTTHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHhhCCHHHHHHHHHHHHH----hHHHHHhChhhhHHHHHHHhhCCHHHHHHHHHH
Confidence 5555566666666666655531 111222334466777777777777776656543
No 120
>3rhw_A Avermectin-sensitive glutamate-gated chloride CHA alpha; membrane protein, transport protein, Cys-loop receptor, LIGA ION channel, neurotransmitter receptor; HET: NAG IVM LMT UND; 3.26A {Caenorhabditis elegans} PDB: 3ri5_A* 3ria_A* 3rif_A*
Probab=22.07 E-value=3.8e+02 Score=27.06 Aligned_cols=44 Identities=20% Similarity=0.224 Sum_probs=27.1
Q ss_pred HHHHHhHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004165 690 VAFGATVHISLSHKWNLVFIPIALVGFVPVTLFALLQFPLLLDM 733 (770)
Q Consensus 690 ~af~~~~~~v~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 733 (770)
..|...+--.+|+.+.--++-++.++|+.+++..++.+.+...+
T Consensus 257 tv~~~~~~~~lP~~S~v~~id~~~~~~~~~v~~slle~~~v~~l 300 (347)
T 3rhw_A 257 TAQSAGINSQLPPVSYIKAIDVWIGACMTFIFCALLEFALVNHI 300 (347)
T ss_dssp HHHHHHHHHTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCccceeHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777788876644455566666666666556655554444
No 121
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=22.06 E-value=55 Score=21.26 Aligned_cols=19 Identities=26% Similarity=0.085 Sum_probs=15.5
Q ss_pred HHHHHHHcCcHHHHHHHHH
Q 004165 451 AMFTAARLGIPEFVNEFIM 469 (770)
Q Consensus 451 pLh~Aa~~G~~eiv~~LL~ 469 (770)
-+..||..|+.+.++.|=.
T Consensus 16 qiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHH
Confidence 3668999999999988744
No 122
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=20.55 E-value=2e+02 Score=29.35 Aligned_cols=61 Identities=7% Similarity=-0.069 Sum_probs=36.5
Q ss_pred ccchhHH-HHHHHHhcCHHHHHHHHHHHHhccccccccccccCCCCcHHHHHHHcCCHHHHHHHHh
Q 004165 90 YYDLSWT-LCRMIEINDRQGAEDLVKEVKEAKSSEDAQRDEYYGRYWPLYKMTQKNDWRGVEDFVG 154 (770)
Q Consensus 90 ~~~~~~t-L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~LL~ 154 (770)
.|.+|+. +......++.+....+++.+.. .-.....+..|...+..+......+-...++.
T Consensus 69 ~d~~gn~vvQklle~~~~~~~~~i~~~i~g----~~~~l~~~~~G~rvvQk~le~~~~~~~~~i~~ 130 (351)
T 3gvo_A 69 TDVFGNYVIQKFFEFGSLDQKLALATRIRG----HVLPLALQMYGCRVIQKALESISSDQQSEMVK 130 (351)
T ss_dssp TSTTHHHHHHHHHHHCCHHHHHHHHHHHTT----CHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHG
T ss_pred hChhhhHHHHHHHhhCCHHHHHHHHHHHHh----hHHHHhhCHHhHHHHHHHHHhCCHHHHHHHHH
Confidence 4556666 6666677888887777766531 11122223446677777777777665555554
Done!