Query 004166
Match_columns 770
No_of_seqs 418 out of 2137
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 16:23:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004166.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004166hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fuu_A Leucine aminopeptidase; 100.0 4.1E-39 1.4E-43 347.5 23.6 252 48-325 19-306 (309)
2 4f9u_A CG32412; alpha/beta hyd 100.0 2E-35 7E-40 319.0 24.4 253 52-329 9-299 (312)
3 4fai_A CG5976, isoform B; alph 100.0 7.6E-35 2.6E-39 317.0 20.5 255 50-326 30-321 (330)
4 3tc8_A Leucine aminopeptidase; 100.0 2.4E-34 8.4E-39 310.1 24.1 253 46-326 17-308 (309)
5 3gux_A Putative Zn-dependent e 100.0 1.1E-33 3.8E-38 305.3 24.0 251 49-326 22-312 (314)
6 3kas_A Transferrin receptor pr 100.0 4.9E-34 1.7E-38 333.2 14.5 273 127-406 265-567 (640)
7 3pb6_X Glutaminyl-peptide cycl 100.0 1.1E-32 3.9E-37 299.0 20.3 254 48-326 33-326 (330)
8 1tkj_A Aminopeptidase, SGAP; d 100.0 2.9E-31 1E-35 282.8 25.7 255 49-334 2-282 (284)
9 2afw_A Glutaminyl-peptide cycl 100.0 3.4E-31 1.2E-35 288.1 21.7 252 48-326 25-325 (329)
10 3fed_A Glutamate carboxypeptid 100.0 7.1E-33 2.4E-37 326.2 7.2 274 126-405 310-633 (707)
11 1rtq_A Bacterial leucyl aminop 100.0 6.6E-30 2.3E-34 274.2 23.8 264 48-335 14-294 (299)
12 3iib_A Peptidase M28; YP_92679 99.9 5.5E-27 1.9E-31 264.8 20.7 200 126-333 233-436 (444)
13 2ek8_A Aminopeptidase; metallo 99.9 6.4E-26 2.2E-30 254.5 22.7 205 127-339 202-412 (421)
14 3k9t_A Putative peptidase; str 99.9 3.1E-20 1.1E-24 202.9 22.4 199 98-331 153-357 (435)
15 4h2k_A Succinyl-diaminopimelat 99.7 4.9E-16 1.7E-20 163.8 20.6 232 54-329 6-268 (269)
16 3t68_A Succinyl-diaminopimelat 99.7 5.9E-16 2E-20 163.0 17.8 232 54-329 6-268 (268)
17 1q7l_A Aminoacylase-1; catalys 99.6 9E-15 3.1E-19 147.2 16.4 146 50-223 6-174 (198)
18 1vhe_A Aminopeptidase/glucanas 99.5 1.2E-13 4E-18 152.4 17.6 227 54-329 7-354 (373)
19 1y0y_A FRV operon protein FRVX 99.5 1.3E-13 4.5E-18 150.7 15.0 152 162-329 180-350 (353)
20 2wyr_A Cobalt-activated peptid 99.5 1.8E-13 6.3E-18 148.2 15.2 147 162-326 171-331 (332)
21 2gre_A Deblocking aminopeptida 99.5 2.7E-13 9.3E-18 148.1 16.2 221 52-325 4-343 (349)
22 3n5f_A L-carbamoylase, N-carba 99.4 1.4E-12 4.9E-17 145.0 16.5 129 52-212 3-143 (408)
23 1cg2_A Carboxypeptidase G2; me 99.4 1.7E-12 5.7E-17 143.7 16.4 146 53-228 18-181 (393)
24 2zog_A Cytosolic non-specific 99.4 6.7E-12 2.3E-16 142.3 19.1 156 53-227 19-201 (479)
25 2fvg_A Endoglucanase; TM1049, 99.4 1.2E-12 4E-17 142.5 11.1 149 162-329 165-335 (340)
26 2pok_A Peptidase, M20/M25/M40 99.3 6.4E-12 2.2E-16 142.8 15.9 144 55-227 45-211 (481)
27 3ct9_A Acetylornithine deacety 99.3 1.8E-11 6E-16 133.9 16.8 135 53-227 10-164 (356)
28 3pfo_A Putative acetylornithin 99.3 2.2E-11 7.7E-16 136.2 16.6 157 54-228 26-205 (433)
29 3ife_A Peptidase T; metallopep 99.3 9.6E-12 3.3E-16 139.6 13.4 139 54-227 27-225 (434)
30 3dlj_A Beta-Ala-His dipeptidas 99.3 5.8E-11 2E-15 135.2 18.8 152 53-227 24-208 (485)
31 3gb0_A Peptidase T; NP_980509. 99.3 2.9E-11 1E-15 132.5 14.7 150 50-229 2-169 (373)
32 2v8h_A Beta-alanine synthase; 99.2 3.4E-11 1.2E-15 136.7 13.9 128 50-210 28-175 (474)
33 2rb7_A Peptidase, M20/M25/M40 99.2 2.5E-11 8.6E-16 133.1 12.1 139 52-226 4-164 (364)
34 1z2l_A Allantoate amidohydrola 99.2 3.3E-11 1.1E-15 134.5 12.1 127 52-210 7-145 (423)
35 1vgy_A Succinyl-diaminopimelat 99.2 1.2E-10 4.1E-15 128.8 15.8 141 53-227 5-168 (393)
36 3tx8_A Succinyl-diaminopimelat 99.2 8.8E-11 3E-15 128.6 14.5 139 54-227 13-167 (369)
37 3rza_A Tripeptidase; phosphory 99.2 9.6E-11 3.3E-15 129.7 14.0 156 45-228 15-189 (396)
38 3isz_A Succinyl-diaminopimelat 99.2 4E-10 1.4E-14 123.1 16.6 140 54-227 3-165 (377)
39 1fno_A Peptidase T; metallo pe 99.1 1.2E-10 4E-15 129.8 12.3 137 55-227 3-198 (417)
40 1lfw_A PEPV; hydrolase, dipept 99.1 5.9E-10 2E-14 126.0 16.9 126 53-213 13-168 (470)
41 3mru_A Aminoacyl-histidine dip 99.1 1.4E-10 4.7E-15 132.4 11.7 141 48-227 8-175 (490)
42 3khx_A Putative dipeptidase sa 99.1 4.2E-10 1.4E-14 128.4 15.7 135 53-226 33-197 (492)
43 3pfe_A Succinyl-diaminopimelat 99.1 5.8E-10 2E-14 126.5 15.5 146 54-227 18-193 (472)
44 2f7v_A Aectylcitrulline deacet 99.1 6.1E-10 2.1E-14 122.1 13.1 130 53-227 8-160 (369)
45 1vho_A Endoglucanase; structur 99.1 1.5E-09 5.1E-14 118.0 15.8 221 55-329 6-336 (346)
46 1ylo_A Hypothetical protein SF 99.0 2.5E-09 8.6E-14 116.2 16.9 150 162-328 167-337 (348)
47 3kl9_A PEPA, glutamyl aminopep 99.0 2.8E-09 9.6E-14 116.7 16.5 222 55-328 4-345 (355)
48 2qyv_A XAA-His dipeptidase; YP 99.0 8.7E-10 3E-14 125.5 12.9 140 50-228 7-173 (487)
49 1xmb_A IAA-amino acid hydrolas 99.0 3.6E-09 1.2E-13 118.1 17.0 135 54-225 28-176 (418)
50 3cpx_A Aminopeptidase, M42 fam 99.0 1.8E-09 6.1E-14 116.6 12.3 221 56-326 19-320 (321)
51 1ysj_A Protein YXEP; M20 famil 99.0 3.9E-09 1.3E-13 117.2 15.2 137 53-224 31-181 (404)
52 3ram_A HMRA protein; two-domai 98.9 8.2E-09 2.8E-13 114.4 11.9 140 54-227 16-158 (394)
53 2vpu_A TET3, 354AA long hypoth 98.8 6.7E-08 2.3E-12 105.7 17.5 219 56-329 11-349 (354)
54 3io1_A Aminobenzoyl-glutamate 98.7 9.5E-08 3.3E-12 107.5 14.1 158 54-226 14-210 (445)
55 3isx_A Endoglucanase; TM1050, 98.4 1.4E-06 4.8E-11 94.7 14.3 212 56-324 13-341 (343)
56 2wzn_A TET3, 354AA long hypoth 98.2 4.1E-05 1.4E-09 80.2 18.9 58 268-330 293-350 (354)
57 3iib_A Peptidase M28; YP_92679 95.1 0.018 6.1E-07 64.6 5.5 44 50-93 17-60 (444)
58 2ek8_A Aminopeptidase; metallo 92.9 0.12 4.1E-06 57.3 6.5 44 48-93 10-53 (421)
59 2ijz_A Probable M18-family ami 84.3 0.95 3.3E-05 50.3 5.5 142 160-311 231-412 (428)
60 3fed_A Glutamate carboxypeptid 84.2 0.87 3E-05 53.8 5.4 43 49-93 20-62 (707)
61 3kas_A Transferrin receptor pr 84.2 0.26 9E-06 57.6 1.0 45 50-94 14-59 (640)
62 2glj_A Probable M18-family ami 70.5 1.5 5E-05 49.3 1.8 43 161-207 258-300 (461)
63 2glf_A Probable M18-family ami 69.1 2 6.9E-05 48.0 2.5 41 161-206 246-286 (450)
64 1y7e_A Probable M18-family ami 68.2 0.84 2.9E-05 51.2 -0.8 45 161-208 252-296 (458)
65 2ijz_A Probable M18-family ami 57.7 5.4 0.00018 44.2 3.2 73 73-157 14-86 (428)
66 3vat_A Dnpep, aspartyl aminope 45.7 5.9 0.0002 44.7 1.1 47 160-207 281-331 (496)
67 2glf_A Probable M18-family ami 43.2 19 0.00066 40.0 4.7 65 77-157 33-97 (450)
68 1q7l_B Aminoacylase-1; catalys 33.2 81 0.0028 26.1 6.1 59 267-330 22-81 (88)
69 1y7e_A Probable M18-family ami 21.0 37 0.0013 37.8 2.1 64 78-157 36-100 (458)
70 3vat_A Dnpep, aspartyl aminope 20.9 69 0.0024 36.0 4.2 71 74-156 49-119 (496)
71 2lx0_A Membrane fusion protein 20.5 57 0.0019 21.7 2.0 18 594-611 8-25 (32)
No 1
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.1e-39 Score=347.53 Aligned_cols=252 Identities=18% Similarity=0.173 Sum_probs=192.0
Q ss_pred cCcccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccc
Q 004166 48 LDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRN 127 (770)
Q Consensus 48 ~~~Fs~era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~ 127 (770)
.++||++||++++++|+ ++|||+.||++++++++||+++|+++| ++++.|.....+. ...+.+
T Consensus 19 ~p~f~~~~a~~~l~~l~-~fgpR~~gS~~~~~a~~~i~~~l~~~g------~~v~~q~~~~~~~----------~~~~~~ 81 (309)
T 4fuu_A 19 VPQFDADSAYLYVKNQV-DFGPRVPNTKEHVACGNYLAGKLEAFG------AKVTNQYADLIAY----------DGTLLK 81 (309)
T ss_dssp CCCCCHHHHHHHHHHHH-TTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEECT----------TSCEEE
T ss_pred CCccCHHHHHHHHHHHh-CcCCcCCCCHHHHHHHHHHHHHHHHcC------CeeEEEeEEeccC----------CCCcce
Confidence 34899999999999999 899999999999999999999999998 4566654433211 112345
Q ss_pred cceEEEEEeCCCCCCCCCeEEEeecCCCCCCC-------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEE
Q 004166 128 HTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS-------------PGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLF 194 (770)
Q Consensus 128 ~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~s-------------~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf 194 (770)
..|||++++|+. ++.|+|+|||||++.+ +||+||++|||+|||++|.|++. +++++|+|+|
T Consensus 82 ~~Nii~~~~g~~----~~~i~l~aH~Ds~~~~~~~~~~~~~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~~~~ 155 (309)
T 4fuu_A 82 ARNIIGSYKPES----KKRIALFAHWDTRPWADNDADEKNHHTPILGANDGASGVGALLEIARLVNQQ--QPELGIDIIF 155 (309)
T ss_dssp EEEEEEEESTTC----SSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEEEE
T ss_pred eEEEEEEECCCC----CceEEEEeecCCCCCCCCccccccccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceEEEe
Confidence 689999999863 4689999999998753 69999999999999999999875 6899999999
Q ss_pred eCcccCCc--------------cChHHHHhhcc-ccCceeEEEEeccCCCCCCceEEeeCCCCc---hhhHhhhhccCc-
Q 004166 195 NGAEELFM--------------LGAHGFMKAHK-WRDSVGAVINVEASGTGGLDLVCQSGPSSW---PSSVYAQSAIYP- 255 (770)
Q Consensus 195 ~~~EE~gl--------------~GS~~fi~~~~-~~~~i~a~INlD~~G~gg~~~lfq~gp~~~---~~~~y~~~~~~p- 255 (770)
|++||.|+ .||+.|+++++ +.++++++||+|++|.+++.+..+.....+ +.+...+.....
T Consensus 156 ~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~~~~i~~~inlDmvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (309)
T 4fuu_A 156 LDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQGYNARFGILLDMVGGENSVFLKEGYSEEFAPDINKKVWKAAKKAG 235 (309)
T ss_dssp ECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSSTTCCCSEEEEECSCCBTTCCEEECHHHHHHCHHHHHHHHHHHHHTT
T ss_pred ecccccCccccccchhhhhhhhcchhHHHhcccccCcceEEEEeeeccCCCCCceEeecCchhhhHHHHHHHHHHHHhcC
Confidence 99999995 89999998763 468899999999999888766554432111 111111111100
Q ss_pred cccccccccCCCCCCCCchHHHhccCCCCcEEEEEEecC----CccCcCcCcccCCCCHHHHHHHHHHHHHHHH
Q 004166 256 MAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIG----GYYYHTSHDTVDRLLPGSVQARGDNLFNVLK 325 (770)
Q Consensus 256 ~~~~l~~e~f~~ips~tD~~~F~~~~~gIPgld~a~~~~----~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~ 325 (770)
....... . ......+||.+|.+ .+|||++++..... ..+|||+.||+|+||+++||++|+++++++.
T Consensus 236 ~~~~~~~-~-~~~~~~sDh~~F~~-~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~id~~~L~~vg~~vl~~ly 306 (309)
T 4fuu_A 236 YGKTFID-E-RGDTITDDHLFINR-LARIKTIDIIPNDPETGFPPTWHTIHDNMDHIDKNTLKAVGQTVLEVIY 306 (309)
T ss_dssp CTTTEEE-E-ECCCCCCHHHHHHH-HTCCCEEEECBC----CCCTTTTSTTCSGGGBCHHHHHHHHHHHHHHHH
T ss_pred Ccccccc-c-CCCCCCCChHHHHh-cCCCCEEEEeccCCCCCCCCCCCCcccchhhCCHHHHHHHHHHHHHHHh
Confidence 0000000 0 11224689999985 47999999976432 2379999999999999999999999999885
No 2
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=100.00 E-value=2e-35 Score=318.95 Aligned_cols=253 Identities=16% Similarity=0.177 Sum_probs=185.6
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceE
Q 004166 52 SEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNI 131 (770)
Q Consensus 52 s~era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NV 131 (770)
++....+.|+.+ ++||.+||++++++++||+++|+++| +++++|....+... ....+.+||
T Consensus 9 ~~~~~~~~l~~i---l~PR~~gs~~~~~~~~~i~~~l~~~g------~~v~~~~f~~~~~~----------~~~~~~~Ni 69 (312)
T 4f9u_A 9 DEVHFNRTLDSI---LVPRVVGSRGHQQVREYLVQSLNGLG------FQTEVDEFKQRVPV----------FGELTFANV 69 (312)
T ss_dssp CHHHHHHHHHHH---CSCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEETT----------TEEEEEEEE
T ss_pred HHHHHHHHHHHh---cCCCCCCCHHHHHHHHHHHHHHHHCC------CeEEEEeEEEecCC----------CCceeEEEE
Confidence 444555555554 57999999999999999999999998 56777765443210 112456899
Q ss_pred EEEEeCCCCCCCCCeEEEeecCCCCC-----CCCCCCCChhHHHHHHHHHHHHHh-----cCCCCCCCEEEEEeCcccCC
Q 004166 132 VMRISSTDSQDTDPSVLMNGHFDGPL-----SSPGAGDCGSCVASMLELARLTID-----SGWIPPRPIIFLFNGAEELF 201 (770)
Q Consensus 132 i~~i~g~~~~~~~~~Vll~aH~Dsv~-----~s~GA~D~~sgva~~LE~ar~l~~-----~~~~~~~~I~flf~~~EE~g 201 (770)
|++++|+ +++.|+++|||||++ .++||+||+||||+|||++|.|++ .+.+|+|+|+|+||++||.|
T Consensus 70 i~~~~~~----~~~~vvl~aHyDs~~~~~~~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G 145 (312)
T 4f9u_A 70 VGTINPQ----AQNFLALACHYDSKYFPNDPGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAF 145 (312)
T ss_dssp EEEESTT----SSEEEEEEEECCCCCCTTCTTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCS
T ss_pred EEEECCC----CCceEEEEEEEecCCCCCCCCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCcccc
Confidence 9999985 357899999999985 368999999999999999999965 24689999999999999988
Q ss_pred --------ccChHHHHhhcccc-------------CceeEEEEeccCCCCCCceEEeeCCCCch----hhHhh---hhcc
Q 004166 202 --------MLGAHGFMKAHKWR-------------DSVGAVINVEASGTGGLDLVCQSGPSSWP----SSVYA---QSAI 253 (770)
Q Consensus 202 --------l~GS~~fi~~~~~~-------------~~i~a~INlD~~G~gg~~~lfq~gp~~~~----~~~y~---~~~~ 253 (770)
+.||++|++++++. +++.++||+|+.|..++..........+. .++.+ +...
T Consensus 146 ~~~~~~~~L~GS~~~a~~~~~~~~~~~~~~~~~~~~~i~~~inlDmvg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 225 (312)
T 4f9u_A 146 KEWTDADSVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSSLVQIEKSLRTAGQ 225 (312)
T ss_dssp SSCSSSSSCHHHHHHHHHHHHCBC-------CBGGGGEEEEEEEESCCSSSCCEEECCGGGHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCccccccChHHHHHHHHhhccccccccccccccceeeeeeeeccccCCCCceEEEeccchhhhHHHHHHHHHHHhcc
Confidence 99999999987432 47899999999998776543221111111 11111 1101
Q ss_pred CccccccccccCCCCCCCCchHHHhccCCCCcEEEEEEecCCccCcCcCcccCCCCHHHHHHHHHHHHHHHHHHhc
Q 004166 254 YPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSN 329 (770)
Q Consensus 254 ~p~~~~l~~e~f~~ips~tD~~~F~~~~~gIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (770)
.+...............+|||.+|.+ .|||++++.....+.+|||+.||+|+||+++++++++.+.+++.++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~SDH~pF~~--~GIP~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~e~l~ 299 (312)
T 4f9u_A 226 LEGNNNMFLSRVSGGLVDDDHRPFLD--ENVPVLHLVATPFPDVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYLK 299 (312)
T ss_dssp SSSSCCCEEEEECSSCCCCTTHHHHT--TTCCEEEEECSSCCTTTTSTTCSGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCCCCCCCchHHHHH--CCCCEEEEECCCCCCCCCCCccChhhCCHHHHHHHHHHHHHHHHHHHh
Confidence 01000000000111224689999986 799999998777777899999999999999999999999999876654
No 3
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=100.00 E-value=7.6e-35 Score=316.97 Aligned_cols=255 Identities=17% Similarity=0.171 Sum_probs=185.3
Q ss_pred cccHHHHHHHHHHHHH-hcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceecccccccccccc
Q 004166 50 RFSEARAIQHVRVLAD-EIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNH 128 (770)
Q Consensus 50 ~Fs~era~~~l~~L~~-~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~ 128 (770)
+|+..+...|++++.+ .++||++||++++++++||.++|+++| ++++.|........ ....+.
T Consensus 30 ~~~~~~~~~~~~~~l~~il~pR~~Gs~~~~~~~~~i~~~l~~~g------~~v~~q~f~~~~~~----------~~~~~~ 93 (330)
T 4fai_A 30 EYSNLSDKLHLREAIDKILIPRVVGTTNHSIVREYIVQSLRDLD------WDVEVNSFHDHAPI----------KGKLHF 93 (330)
T ss_dssp HHHTCCCHHHHHHHHHHHCSCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEETT----------TEEEEE
T ss_pred hcccccHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHCC------CEEEEeeeeeecCC----------CCceeE
Confidence 3444445566665443 368999999999999999999999998 67777765432210 122456
Q ss_pred ceEEEEEeCCCCCCCCCeEEEeecCCCCCC----CCCCCCChhHHHHHHHHHHHHHh---cCCCCCCCEEEEEeCcccCC
Q 004166 129 TNIVMRISSTDSQDTDPSVLMNGHFDGPLS----SPGAGDCGSCVASMLELARLTID---SGWIPPRPIIFLFNGAEELF 201 (770)
Q Consensus 129 ~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~----s~GA~D~~sgva~~LE~ar~l~~---~~~~~~~~I~flf~~~EE~g 201 (770)
.|||++++|+ .++.|+++|||||++. .+||+||++|||+|||++|.|++ .+++|+++|+|+||+|||.|
T Consensus 94 ~Nii~~~~~~----~~~~i~l~aHyDs~~~~~~~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~G 169 (330)
T 4fai_A 94 HNIIATLNPN----AERYLVLSCHYDSKYMPGVEFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAF 169 (330)
T ss_dssp EEEEEESCTT----CSEEEEEEEECCCCCCTTSCCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCS
T ss_pred EEEEEEECCC----CCcEEEEEEeecccccccCCCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEecccccc
Confidence 8999999885 3578999999999863 47999999999999999999965 35789999999999999998
Q ss_pred c--------cChHHHHhhc---cccCceeEEEEeccCCCCCCceEEeeCCCCchhhHh----hhhc------cCc---cc
Q 004166 202 M--------LGAHGFMKAH---KWRDSVGAVINVEASGTGGLDLVCQSGPSSWPSSVY----AQSA------IYP---MA 257 (770)
Q Consensus 202 l--------~GS~~fi~~~---~~~~~i~a~INlD~~G~gg~~~lfq~gp~~~~~~~y----~~~~------~~p---~~ 257 (770)
+ .||+.|+++. ...+++.++||+|++|.+++.......+..+..... .+.. ..+ ..
T Consensus 170 l~~~~~~~llGS~~~a~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (330)
T 4fai_A 170 EEWGPKDSIYGARHLAKKWHHEGKLDRIDMLVLLDLLGAPDPAFYSFFENTESWYMRIQSVETRLAKLQLLERYASSGVA 249 (330)
T ss_dssp SSCBTTBSCHHHHHHHHHHHHTTCSTTEEEEEEECSCSSSSCCEEECCGGGHHHHHHHHHHHHHHHHTTC----------
T ss_pred ccccccchhhhhHHHHhcchhccchhceeEEEEeccCccCCCCceeeccCcchHHHHHHHHHHHhhhhhhhhhhhccccc
Confidence 5 7999999864 235789999999999988876544332221111110 0000 000 00
Q ss_pred cccccccC-----CCCCCCCchHHHhccCCCCcEEEEEEecCCccCcCcCcccCCCCHHHHHHHHHHHHHHHHH
Q 004166 258 HSAAQDVF-----PVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKA 326 (770)
Q Consensus 258 ~~l~~e~f-----~~ips~tD~~~F~~~~~gIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~ 326 (770)
.......| ......|||.+|.+ .|||++++.....+.+|||+.||+|+||+++++++++.+.+++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~SDH~pF~~--~GIP~l~~i~~~~~~~yHT~~Dt~d~iD~~tl~~~~~ii~~Fv~E 321 (330)
T 4fai_A 250 QRDPTRYFQSQAMRSSFIEDDHIPFLR--RNVPILHLIPVPFPSVWHTPDDNASVIDYATTDNLALIIRLFALE 321 (330)
T ss_dssp -----CCEEEEEETTCCCCSTTHHHHT--TTCCEEEECCSSCCTTTTSTTSSGGGCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccCCCCCCCCCchHHHHH--CCCCEEEEECCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHH
Confidence 00000011 11123689999986 799999997666667899999999999999999999998887754
No 4
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=100.00 E-value=2.4e-34 Score=310.11 Aligned_cols=253 Identities=20% Similarity=0.219 Sum_probs=193.5
Q ss_pred CCcCcccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccc
Q 004166 46 APLDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGY 125 (770)
Q Consensus 46 ~~~~~Fs~era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y 125 (770)
....+|+++|+++++++|+ ++++|..||++++++++||.++|+++| +++++|.....+. ...+
T Consensus 17 ~~~~~~~~~~~~~~l~~l~-~~~~R~~~s~~~~~~~~~l~~~l~~~G------~~v~~~~~~~~~~----------~g~~ 79 (309)
T 3tc8_A 17 SAVPDFNADSAYAYVANQV-AFGPRVPNTAAHKACGDYLASELKRFG------AKVYQQEAILTAY----------DGTK 79 (309)
T ss_dssp CCSCCCCHHHHHHHHHHHH-HTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEECT----------TSCE
T ss_pred hcccccCHHHHHHHHHHHH-ccCCCCCCCHHHHHHHHHHHHHHHHCC------CeEEEEEeecccc----------CCCc
Confidence 3456899999999999998 899999999999999999999999998 4566654332110 0123
Q ss_pred cccceEEEEEeCCCCCCCCCeEEEeecCCCCCCC-------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEE
Q 004166 126 RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS-------------PGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (770)
Q Consensus 126 ~~~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~s-------------~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~f 192 (770)
.+..|||++++|+ +++.|+++||+|||+.+ +||.||++|||+|||++|.|++. +++++|+|
T Consensus 80 ~~~~Nvia~~~g~----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~Ga~D~~sGva~~Le~ar~l~~~--~~~~~i~f 153 (309)
T 3tc8_A 80 LEARNIIGSFDPE----NSKRVLLFAHWDSRPYSDHDPDPSKHRTPLDGADDGGSGVGALLEIARQIGQK--APGIGIDI 153 (309)
T ss_dssp EEEEEEEEEESTT----CSSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEE
T ss_pred ccceEEEEEECCC----CCceEEEEecccCCCCCCCCccccCCCccccCcccchHhHHHHHHHHHHHHhC--CCCCcEEE
Confidence 4568999999985 24789999999999876 79999999999999999999987 48999999
Q ss_pred EEeCcccCCc-------------cChHHHHhhccc-cCceeEEEEeccCCCCCCceEEeeCCC-Cc---hhhHhhhhccC
Q 004166 193 LFNGAEELFM-------------LGAHGFMKAHKW-RDSVGAVINVEASGTGGLDLVCQSGPS-SW---PSSVYAQSAIY 254 (770)
Q Consensus 193 lf~~~EE~gl-------------~GS~~fi~~~~~-~~~i~a~INlD~~G~gg~~~lfq~gp~-~~---~~~~y~~~~~~ 254 (770)
+++++||.|+ .||+.|+++++. .++++++||+|++|.++..+... +.. .| +.+.+.+.+.
T Consensus 154 ~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlD~~G~~~~~~~~~-~~~~~~~~~l~~~~~~~a~- 231 (309)
T 3tc8_A 154 IFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVPNYTAEYGILLDMVGGKNATFFKE-QQSLRAAAPIVEMVWSAAR- 231 (309)
T ss_dssp EEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCCEEEC-HHHHHHHHHHHHHHHHHHH-
T ss_pred EEECccccccccccccccccccchhHHHHHhCCCccccceEEEEEecccCCCCCceeec-ccccchHHHHHHHHHHHHH-
Confidence 9999999999 999999985543 37899999999999988754322 111 12 2222222111
Q ss_pred cccc-c-cccccCCCCCCCCchHHHhccCCCCcEEEEEEe------cCCccCcCcCcccCCCCHHHHHHHHHHHHHHHHH
Q 004166 255 PMAH-S-AAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFL------IGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKA 326 (770)
Q Consensus 255 p~~~-~-l~~e~f~~ips~tD~~~F~~~~~gIPgld~a~~------~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~ 326 (770)
..+. . ...+..+ ...|||.+|.+ +.|||++++... ....+|||+.||+|+||+++++++++++++++.+
T Consensus 232 ~~g~~~~f~~~~~g--~~~sDh~~f~~-~~GiP~~~li~~~~~~~~~~~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~vy~ 308 (309)
T 3tc8_A 232 DLGYGKYFINAAGG--AITDDHQYVIS-GRNIPSIDIINYDPESKTGFASYWHTQKDNMENIDRETLKAAGQTVLEVIYN 308 (309)
T ss_dssp HHTCTTTEEEEECC--CCCCHHHHHHH-HHCCCEEEEEBCCTTSSSSSCTTTTSTTCSGGGBCHHHHHHHHHHHHHHHHH
T ss_pred HcCCcceeccCCCC--CCCCccHHHHh-cCCCCEEEEecccCcccCCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHhc
Confidence 1110 0 0000011 13689999986 359999999765 2346899999999999999999999999999864
No 5
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=1.1e-33 Score=305.34 Aligned_cols=251 Identities=20% Similarity=0.231 Sum_probs=174.4
Q ss_pred CcccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceecccccccccccc
Q 004166 49 DRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNH 128 (770)
Q Consensus 49 ~~Fs~era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~ 128 (770)
++|+++|++++|++|+ ++++|..||++++++++||.++|+++| +++++|.....+ + ...+.+.
T Consensus 22 ~~~~~~~~~~~l~~L~-~~~~R~~gs~~~~~~~~~l~~~l~~~G------~~v~~~~~~~~~-~---------~g~~~~~ 84 (314)
T 3gux_A 22 PEFDADSAYQYIQVQA-DFGPRVPNTQAHKECGEYLAGQLEKFG------AKVYNQYADLIA-Y---------DGTILKS 84 (314)
T ss_dssp CCCCHHHHHHHHHHHH-TTCCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEEEEEEEC-T---------TSCEEEE
T ss_pred CCCCHHHHHHHHHHHH-ccCCcCCCCHHHHHHHHHHHHHHHHCC------CEEEEEEeeccc-c---------CCCcccc
Confidence 5899999999999999 899999999999999999999999998 556665433211 0 0112356
Q ss_pred ceEEEEEeCCCCCCCCCeEEEeecCCCCCCC-------------CCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEe
Q 004166 129 TNIVMRISSTDSQDTDPSVLMNGHFDGPLSS-------------PGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFN 195 (770)
Q Consensus 129 ~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~s-------------~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~ 195 (770)
.|||++++|+ +++.|+++||+|||+.+ +||.||++|||+|||++|.|++. +++++|+|+++
T Consensus 85 ~Nvia~~~g~----~~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~GA~D~~sGva~~Le~ar~l~~~--~~~~~i~fv~~ 158 (314)
T 3gux_A 85 RNIIGAYKPE----SKKRILLCAHWDSRPYADNDPDPKNHHTPILGVNDGASGVGVLLEIARQIQKE--QPALGIDIVFF 158 (314)
T ss_dssp EEEEEEESTT----CSSEEEEEEECCCCC--------------------CHHHHHHHHHHHHHHHHS--CCSSEEEEEEE
T ss_pred eEEEEEECCC----CCceEEEEccccCCCcCCCCcccccCCcccCCCcccHHHHHHHHHHHHHHHhC--CCCCcEEEEEE
Confidence 8999999985 24789999999999865 79999999999999999999986 48999999999
Q ss_pred CcccCCc--------------cChHHHHhhccc-cCceeEEEEeccCCCCCCceEEeeCCC-C---chhhHhhhhccCcc
Q 004166 196 GAEELFM--------------LGAHGFMKAHKW-RDSVGAVINVEASGTGGLDLVCQSGPS-S---WPSSVYAQSAIYPM 256 (770)
Q Consensus 196 ~~EE~gl--------------~GS~~fi~~~~~-~~~i~a~INlD~~G~gg~~~lfq~gp~-~---~~~~~y~~~~~~p~ 256 (770)
++||.|+ .||+.|+++++. .++++++||+|++|..+..+ ++.++. . ++.+.+.+.+. ..
T Consensus 159 ~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~~~~~~~~~inlDm~G~~~~~~-~~~g~~~~~~~~l~~~~~~~~~-~~ 236 (314)
T 3gux_A 159 DSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQNYNARYGILLDMVGGKDATF-YYEGYSARTARSEMKKIWKKAH-EL 236 (314)
T ss_dssp CSCCC-----------CTTSCHHHHHHHHSCSSTTCCCSEEEEEESCCBTTCCE-EECTTHHHHCHHHHHHHHHHHH-HH
T ss_pred CCccccccccccccccccccchhHHHHHhCCcccccceeEEEEEeccCCCCCce-eeeccccccHHHHHHHHHHHHH-Hc
Confidence 9999999 999999985543 37899999999999988764 444432 1 22222222111 11
Q ss_pred cc-ccccccCCCCCCCCchHHHhccCCCCcEEEEEEec-----C--CccCcCcCcccCCCCHHHHHHHHHHHHHHHHH
Q 004166 257 AH-SAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLI-----G--GYYYHTSHDTVDRLLPGSVQARGDNLFNVLKA 326 (770)
Q Consensus 257 ~~-~l~~e~f~~ips~tD~~~F~~~~~gIPgld~a~~~-----~--~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~ 326 (770)
+. ....+..+ ....|||.+|.+ ..|||++++.... + ..+|||+.||+|+||++++++++++++.++.+
T Consensus 237 g~~~~f~~~~~-~~~~sDh~pF~~-~~GiP~l~~i~~~~~~~~~~f~~~~Ht~~Dt~d~id~~~l~~~~~~~~~~~y~ 312 (314)
T 3gux_A 237 GYGKYFVKEDG-GETVDDHIYVNK-LARIPCVDIINYDAGNPQSSFGSFWHTVNDTMENIDRNTLKAVGQTVMDVIYN 312 (314)
T ss_dssp TCTTTEEEEEC-CCCCCHHHHHHH-HSCCCEEEEEBCC--------------------CBCHHHHHHHHHHHHHHHHT
T ss_pred CCccccccccC-CCCCCccHHHHh-cCCCceEEEecccccccccCCCCCCCCCcCcchhCCHHHHHHHHHHHHHHHhh
Confidence 10 00000001 123689999986 3599999997653 1 35899999999999999999999999999864
No 6
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=100.00 E-value=4.9e-34 Score=333.18 Aligned_cols=273 Identities=20% Similarity=0.186 Sum_probs=215.6
Q ss_pred ccceEEEEEeCCCCCCCCCeEEEeecCCCCCCCCCCCCChhHHHHHHHHHHHHHh----cCCCCCCCEEEEEeCcccCCc
Q 004166 127 NHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTID----SGWIPPRPIIFLFNGAEELFM 202 (770)
Q Consensus 127 ~~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~s~GA~D~~sgva~~LE~ar~l~~----~~~~~~~~I~flf~~~EE~gl 202 (770)
.+.|||++++|++ .++++|+++||+|||. +||.||++|+|+|||++|.|++ .+++|+|+|+|++|++||.|+
T Consensus 265 ~~~NVi~~i~G~~--~~~~~vvvgaH~Ds~~--~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~EE~gl 340 (640)
T 3kas_A 265 KILNIFGVIKGFV--EPDHYVVVGAQRDAWG--PGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDFGS 340 (640)
T ss_dssp EEEEEEEEECCSS--EEEEEEEEEEECCCSS--CCTTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEEEEEESSGGGTS
T ss_pred eEEEEEEEEeCCc--CCCCceeeecccCCCC--CCCCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEECCcccCc
Confidence 5679999999973 2468999999999995 9999999999999999999985 378999999999999999999
Q ss_pred cChHHHHhhcc--ccCceeEEEEeccCCCCCCceEEeeCCC-CchhhHhhhhccCccc-cccccc-c----CCCCCCCCc
Q 004166 203 LGAHGFMKAHK--WRDSVGAVINVEASGTGGLDLVCQSGPS-SWPSSVYAQSAIYPMA-HSAAQD-V----FPVIPGDTD 273 (770)
Q Consensus 203 ~GS~~fi~~~~--~~~~i~a~INlD~~G~gg~~~lfq~gp~-~~~~~~y~~~~~~p~~-~~l~~e-~----f~~ips~tD 273 (770)
.||++|+++|. +.++++++||+|++|.|++.+.++++|. .++++.+.+.+++|.. .++.++ . .+.++++||
T Consensus 341 ~GS~~~~~~~~~~l~~~~~a~iNlD~~~~G~~~l~~~~~p~l~~l~~~~~~~v~~P~~~~tl~~~~~w~~~~~~~~~~sD 420 (640)
T 3kas_A 341 VGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVTGQFLYQDSNWASKVEKLTLDNA 420 (640)
T ss_dssp HHHHHHHHHTTTTGGGTEEEEEECTTCBSCSSEEEEEECGGGHHHHHHHHTTCBCTTTCSBSCCCTTGGGGCCCCCTTST
T ss_pred hhHHHHHHhhhhhhhhCEEEEEecccCccCCCceEEEeCHHHHHHHHHHHHhCCCCCCCCceecccccccccCCCCCCcc
Confidence 99999999883 3589999999999999888888988875 3344555667788875 344432 2 256789999
Q ss_pred hHHHhccCCCCcEEEEEEecC-Cc-cCcCcCcccCCCCH------HHHHHHHHHHHHHHHHHhcCcCcc-ccchhh----
Q 004166 274 YRIFSQDYGDIPGLDIIFLIG-GY-YYHTSHDTVDRLLP------GSVQARGDNLFNVLKAFSNSSKLQ-NAHDRA---- 340 (770)
Q Consensus 274 ~~~F~~~~~gIPgld~a~~~~-~~-~YHT~~Dt~d~id~------~~lq~~g~~~l~l~~~la~a~~l~-~~~~~~---- 340 (770)
|.+|.+ +.|||++|+++..+ .| +|||.+||+++++. ...+.+++.+..++.+|++++.+| |..++.
T Consensus 421 ~~~F~~-~~GIP~~~~~~~~~~~y~~yHT~~Dt~~~i~~~~~~~~~~h~~~a~~~g~l~l~La~~~~lP~~~~~y~~~l~ 499 (640)
T 3kas_A 421 AFPFLA-YSGIPAVSFCFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDVELNLDYERYNSQLL 499 (640)
T ss_dssp HHHHHH-HHCCCEEEEEEECSSCCTTTTSTTCCHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHSSSCCCCTTHHHHHHH
T ss_pred hHHHHH-hCCCCeeeccccCCCCCCCcCCccccHHHHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 999975 68999999999866 45 59999999998753 357778899999999999998887 554432
Q ss_pred ----hhhhccCCCCCCCeeEccchhHhhhhccHHHHHHHhhhhHHHhhccceEEEEecccchhhHHhHHH
Q 004166 341 ----SFEATGIKNTDERAIFFDYLTWFMIYYSRSRATVLHGIPIVIFITVPFFLRLLNSGLHSWFATYSD 406 (770)
Q Consensus 341 ----~~~~~~~~~~~~~~V~fd~lg~~~v~y~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (770)
++++ .....+...+.|+.|..++..|... |..++..+......++..+|++|+|+|.+||.|++
T Consensus 500 ~~~~~l~~-~~~~~~~~~~~~~~l~~a~~~f~~a-a~~~~~~~~~~~~~~~~~~r~~N~~l~~~er~fl~ 567 (640)
T 3kas_A 500 SFVRDLNQ-YRADIKEMGLSLQWLYSARGDFFRA-TSRLTTDFGNAEKTDRFVMKKLNDRVMRVEYHFLS 567 (640)
T ss_dssp HHHHHHGG-GTTTTTTTTCCCHHHHHHHHHHHHH-HHHHHHHHHHSCTTCHHHHHHHHHHHHHHGGGGBC
T ss_pred HHHHHHHH-HHHhhhccCCChHHHHHHHHHHHHH-HHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhhcC
Confidence 2222 2233344579999999999999985 55666544433334455678899999999997643
No 7
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=100.00 E-value=1.1e-32 Score=299.01 Aligned_cols=254 Identities=19% Similarity=0.199 Sum_probs=188.4
Q ss_pred cCcccHHHHHH-HHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceecccccccccc
Q 004166 48 LDRFSEARAIQ-HVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYR 126 (770)
Q Consensus 48 ~~~Fs~era~~-~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~ 126 (770)
+++|+.+|+++ +|+.+ +++|..||++++++++||.+++++++. .+++++|....+.. ..+.
T Consensus 33 ~~~~~~~~~~~~~L~~~---~~~R~~gS~~~~~a~~~l~~~l~~~~~----g~~v~~d~f~~~~~-----------~g~~ 94 (330)
T 3pb6_X 33 VGQLDPQRLWSTYLRPL---LVVRTPGSPGNLQVRKFLEATLRSLTA----GWHVELDPFTASTP-----------LGPV 94 (330)
T ss_dssp HHTCCHHHHHHHTTGGG---CSCCCTTSHHHHHHHHHHHHHHHHSTT----CCEEEEEEEEEEET-----------TEEE
T ss_pred cccCCHHHHHHHHHHHH---hCCCCCCCHHHHHHHHHHHHHHHHhCC----CCeEEEEeeecccc-----------cCCc
Confidence 35799999987 67766 789999999999999999999999852 15666665432210 0134
Q ss_pred ccceEEEEEeCCCCCCCCCeEEEeecCCCCCC------CCCCCCChhHHHHHHHHHHHHHhc-----CCCCCCCEEEEEe
Q 004166 127 NHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS------SPGAGDCGSCVASMLELARLTIDS-----GWIPPRPIIFLFN 195 (770)
Q Consensus 127 ~~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~------s~GA~D~~sgva~~LE~ar~l~~~-----~~~~~~~I~flf~ 195 (770)
+..|||++++|+. ++.|+++|||||++. .+||+||++|||++||++|.|++. +.+++++|.|+++
T Consensus 95 ~~~Nvia~~~g~~----~~~ivl~aH~Dsv~~~~g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~ 170 (330)
T 3pb6_X 95 DFGNVVATLDPRA----ARHLTLACHYDSKLFPPGSTPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFL 170 (330)
T ss_dssp EEEEEEEESCTTS----SEEEEEEEECCCCCCCTTSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEE
T ss_pred cceEEEEEECCCC----CceEEEEeccCCCCCCCCCcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEE
Confidence 5689999999863 478999999999863 389999999999999999999863 3579999999999
Q ss_pred CcccC--------CccChHHHHhhcc---------ccCceeEEEEeccCCCCCCceEEeeCCC-CchhhHhh---hhc--
Q 004166 196 GAEEL--------FMLGAHGFMKAHK---------WRDSVGAVINVEASGTGGLDLVCQSGPS-SWPSSVYA---QSA-- 252 (770)
Q Consensus 196 ~~EE~--------gl~GS~~fi~~~~---------~~~~i~a~INlD~~G~gg~~~lfq~gp~-~~~~~~y~---~~~-- 252 (770)
++||. |+.||+.|++++. ..++|+++||+|++|..++.+. ...+. .+..+... +..
T Consensus 171 ~~EE~f~~w~~~~gl~GS~~~a~~~~~~~~~~~~~~~~~i~~~inlDmiG~~~~~~~-~~~~~t~~~~~~l~~i~~~~~~ 249 (330)
T 3pb6_X 171 DGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLDLLGAPNPTFY-SHFPRTVRWFHRLRSIEKRLHR 249 (330)
T ss_dssp SCCSCSSCCSTTSSCHHHHHHHHHHHHSBCSSCSBTTTTEEEEEEEESCSSSSCCBC-CCCGGGHHHHHHHHHHHHHHHH
T ss_pred cCcccccccCCCCCCccHHHHHHHHHhcCCccccchhhCeEEEEeccCCCCCCCCce-eecCcchHHHHHHHHHHHHHHH
Confidence 99999 9999999998532 3579999999999999877642 11121 11111111 110
Q ss_pred -----cCccccccccccCCCCCCCCchHHHhccCCCCcEEEEEEecCCccCcCcCcccCCCCHHHHHHHHHHHHHHHHH
Q 004166 253 -----IYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKA 326 (770)
Q Consensus 253 -----~~p~~~~l~~e~f~~ips~tD~~~F~~~~~gIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~ 326 (770)
.+|................|||.+|.+ .|||++++........|||+.||+|+||+++++++++.+..++.+
T Consensus 250 ~g~~~~~p~~~~~f~~~~~~~~~~SDH~pF~~--~GIP~~~~~~~~f~~~yHt~~Dt~d~id~~~l~~~~~i~~~fv~E 326 (330)
T 3pb6_X 250 LNLLQSHPQEVMYFQPGEPFGSVEDDHIPFLR--RGVPVLHLISTPFPAVWHTPADTEVNLHPPTVHNLCRILAVFLAE 326 (330)
T ss_dssp TTCCSSCCSSCSSBCSSCSSCCCSCTTHHHHT--TTCCEEEEECSSCCTTTTSTTCSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cCccccCCcccccccccccCCCCCCchHhHHH--CCCCEEEEEcCCCCCCCCCCcCchhhCCHHHHHHHHHHHHHHHHH
Confidence 011100000000001124799999986 899999997655556899999999999999999999999998765
No 8
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.98 E-value=2.9e-31 Score=282.79 Aligned_cols=255 Identities=19% Similarity=0.303 Sum_probs=194.3
Q ss_pred CcccHHHHHHHHHHHHHhc-----CCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccc
Q 004166 49 DRFSEARAIQHVRVLADEI-----GDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISL 123 (770)
Q Consensus 49 ~~Fs~era~~~l~~L~~~i-----g~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~ 123 (770)
.+++.+++.++|++|+ ++ ++|..++++++++++||.++++++| ++++++.....+
T Consensus 2 ~~i~~~~~~~~l~~L~-~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g------~~v~~~~~~~~~------------- 61 (284)
T 1tkj_A 2 PDIPLANVKAHLTQLS-TIAANNGGNRAHGRPGYKASVDYVKAKLDAAG------YTTTLQQFTSGG------------- 61 (284)
T ss_dssp CCCCHHHHHHHHHHHH-HHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHT------CEEEEEEEEETT-------------
T ss_pred CcCCHHHHHHHHHHHH-cccccCCCCCCCCCHHHHHHHHHHHHHHHHcC------CeEEEEEeccCC-------------
Confidence 3678999999999998 33 3677888888899999999999998 455554422111
Q ss_pred cccccceEEEEEeCCCCCCCCCeEEEeecCCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCcc
Q 004166 124 GYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFML 203 (770)
Q Consensus 124 ~y~~~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE~gl~ 203 (770)
.+..||+++++|++ +++.|++++|+|+|+.++||.||++|+|++||++|.|++.+++++++|+|+|+++||.|+.
T Consensus 62 --~~~~nvi~~~~g~~---~~~~i~l~aH~D~v~~g~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~ 136 (284)
T 1tkj_A 62 --ATGYNLIANWPGGD---PNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGLI 136 (284)
T ss_dssp --EEEEEEEEECSCSE---EEEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSH
T ss_pred --CCceeEEEEEeCCC---CCCEEEEEeecCCCCCCCCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCCc
Confidence 23469999998853 3478999999999999999999999999999999999998888999999999999999999
Q ss_pred ChHHHHhhccc--cCceeEEEEeccCCCCCCceEEeeCCCCchhhHhhhhccCccccccccccCCCCCCCCchHHHhccC
Q 004166 204 GAHGFMKAHKW--RDSVGAVINVEASGTGGLDLVCQSGPSSWPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYRIFSQDY 281 (770)
Q Consensus 204 GS~~fi~~~~~--~~~i~a~INlD~~G~gg~~~lfq~gp~~~~~~~y~~~~~~p~~~~l~~e~f~~ips~tD~~~F~~~~ 281 (770)
||+.|+++++. .++++++||+|+.|.++.......+ ++.+.+.+.+.+.. .+ +..+.......+|||.+|.+
T Consensus 137 Gs~~~~~~~~~~~~~~~~~~i~~D~~g~~~~~~~~~~~-~~~l~~~~~~~~~~-~g--i~~~~~~~~~~~sD~~~f~~-- 210 (284)
T 1tkj_A 137 GSKFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVYDD-DPVIEKTFKNYFAG-LN--VPTEIETEGDGRSDHAPFKN-- 210 (284)
T ss_dssp HHHHHHHHSCHHHHTTEEEEEEECCCCCSSCCCEECCS-SHHHHHHHHHHHHH-HT--CCCEECCSSTTCSTHHHHHH--
T ss_pred CHHHHHhhCccchhhcEEEEEEecCCCCCCCCeEEecC-CHHHHHHHHHHHHH-cC--CCcccCCCCCCCCchHHHHH--
Confidence 99999998753 4789999999999887654444322 23333333221111 00 00011111235799999986
Q ss_pred CCCcEEEEEEec-------------------CCccCcCcCcccCCCCHHHHHHHHHHHHHHHHHHhcCcCcc
Q 004166 282 GDIPGLDIIFLI-------------------GGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNSSKLQ 334 (770)
Q Consensus 282 ~gIPgld~a~~~-------------------~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~a~~l~ 334 (770)
.|||++.+.... ...+|||+.||++++|++.+++.++.+..+++.+++++.+|
T Consensus 211 ~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~~id~~~l~~~~~~~~~~~~~la~~~~~P 282 (284)
T 1tkj_A 211 VGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTLSSGTGEP 282 (284)
T ss_dssp TTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCCHHHHHHHHHHHHHHHHHHHC-----
T ss_pred CCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 799999987641 13479999999999999999999999999999999987765
No 9
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.97 E-value=3.4e-31 Score=288.13 Aligned_cols=252 Identities=19% Similarity=0.232 Sum_probs=185.9
Q ss_pred cCcccHHHH-HHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHh--cccccCCceeEEEEEeeecCcccceecccccccc
Q 004166 48 LDRFSEARA-IQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEG--IKERAGPKFRIEIEENVVNGSFNMIFLGHSISLG 124 (770)
Q Consensus 48 ~~~Fs~era-~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~--ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~ 124 (770)
+.+++++|+ .+++++| +++|..+|++++++++||.+++++ .| ++++++....... ..
T Consensus 25 ~~~~~~~~~~~~~l~~L---~~~r~~~s~~~~~~~~~l~~~l~~~~~G------~~v~~~~~~~~~~-----------~g 84 (329)
T 2afw_A 25 AEGTSISEMWQNDLQPL---LIERYPGSPGSYAARQHIMQRIQRLQAD------WVLEIDTFLSQTP-----------YG 84 (329)
T ss_dssp HHHCCHHHHHHHTTGGG---CSCCCTTSHHHHHHHHHHHHHHHTSSSC------CEEEEEEEEECCT-----------TS
T ss_pred hhhcCHHHHHHHHHHHH---cCCCCCCCHHHHHHHHHHHHHHHhhCCC------CEEEEEEEEecCC-----------CC
Confidence 457999999 8999988 689999999999999999999999 55 5666665433210 11
Q ss_pred ccccceEEEEEeCCCCCCCCCeEEEeecCCCCCCC-------CCCCCChhHHHHHHHHHHHHHhc--------CCCCCCC
Q 004166 125 YRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS-------PGAGDCGSCVASMLELARLTIDS--------GWIPPRP 189 (770)
Q Consensus 125 y~~~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~s-------~GA~D~~sgva~~LE~ar~l~~~--------~~~~~~~ 189 (770)
+.+..|||++++|+ +++.|+++||+|||+.+ +||.||++|||+|||++|.|++. +++++++
T Consensus 85 ~~~~~Nvi~~~~g~----~~~~i~l~aH~Dsv~~~~~~~~~~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~ 160 (329)
T 2afw_A 85 YRSFSNIISTLNPT----AKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLS 160 (329)
T ss_dssp SEEEEEEEEESSTT----SSEEEEEEEECCCCCCCCBTTBCCCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEE
T ss_pred CceEeEEEEEECCC----CCcEEEEEEeccCCCcCcccCcCCCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCcc
Confidence 24568999999885 35789999999999865 89999999999999999999875 4678999
Q ss_pred EEEEEeCcccC--------CccChHHHHhhcc------------ccCceeEEEEeccCCCCCCceE--EeeCCCCchh--
Q 004166 190 IIFLFNGAEEL--------FMLGAHGFMKAHK------------WRDSVGAVINVEASGTGGLDLV--CQSGPSSWPS-- 245 (770)
Q Consensus 190 I~flf~~~EE~--------gl~GS~~fi~~~~------------~~~~i~a~INlD~~G~gg~~~l--fq~gp~~~~~-- 245 (770)
|+|+++++||. |+.||+.|++++. ..++++++||+|++|.++..+. +..+. ++..
T Consensus 161 i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~~~~~~~~p~~~~~~~~~~~i~~~inlD~iG~~~~~~~~~~~~~~-~~~~~l 239 (329)
T 2afw_A 161 LQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSA-RWFERL 239 (329)
T ss_dssp EEEEEESCCSCSSSCCSSSSCHHHHHHHHHHHTSBSSTTCSSCBTTTTEEEEEEECSCCSSSCCBCCCCGGGH-HHHHHH
T ss_pred EEEEEecCcccccccCCCccchhHHHHHHHHHhCCCcccccccccccceEEEEEeccCCCCCCceeeeccCcc-hHHHHH
Confidence 99999999998 9999999998752 1467999999999998776432 11111 1110
Q ss_pred hHhhhhccCc-c--ccccccccCCC----CCCCCchHHHhccCCCCcEEEEEEecCCccCcCcCcccCCCCHHHHHHHHH
Q 004166 246 SVYAQSAIYP-M--AHSAAQDVFPV----IPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGD 318 (770)
Q Consensus 246 ~~y~~~~~~p-~--~~~l~~e~f~~----ips~tD~~~F~~~~~gIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~ 318 (770)
....+..... . ........|.. ....|||.+|.+ .|||++++......+.|||.+||++++|+++++++++
T Consensus 240 ~~~~~~~~~~g~~~~~~~~~~~f~~~~~~g~~~sDh~~F~~--~GiP~~~~~~~~~~~~yHt~~Dt~~~ld~~~l~~~~~ 317 (329)
T 2afw_A 240 QAIEHELHELGLLKDHSLEGRYFQNYSYGGVIQDDHIPFLR--RGVPVLHLIPSPFPEVWHTMDDNEENLDESTIDNLNK 317 (329)
T ss_dssp HHHHHHHHHTTCSSSCCSTTCSBCSCCCCSCCCSTTHHHHT--TTCCEEEECCSSCCTTTTSTTCSSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCccCCCcccccccccccCCCCCCCCHhHHH--CCCCEEEEEcCCCCCCCCCCCCchhhCCHHHHHHHHH
Confidence 0001111000 0 00000111211 123699999986 6999999987666679999999999999999999999
Q ss_pred HHHHHHHH
Q 004166 319 NLFNVLKA 326 (770)
Q Consensus 319 ~~l~l~~~ 326 (770)
.+..++.+
T Consensus 318 ~~~~~v~e 325 (329)
T 2afw_A 318 ILQVFVLE 325 (329)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877654
No 10
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=99.97 E-value=7.1e-33 Score=326.23 Aligned_cols=274 Identities=23% Similarity=0.239 Sum_probs=210.1
Q ss_pred cccceEEEEEeCCCCCCCCCeEEEeecCCCCCCCCCCCCChhHHHHHHHHHHHHHh---cCCCCCCCEEEEEeCcccCCc
Q 004166 126 RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTID---SGWIPPRPIIFLFNGAEELFM 202 (770)
Q Consensus 126 ~~~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~s~GA~D~~sgva~~LE~ar~l~~---~~~~~~~~I~flf~~~EE~gl 202 (770)
..+.|||++++|++ ++++.|+++||+|||+ +||.||++|+|++||++|.|.+ .+++|+|+|+|++|++||.|+
T Consensus 310 ~~~~NVi~~i~G~~--~~~~~vllgaH~Ds~~--~Ga~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f~~~~~EE~Gl 385 (707)
T 3fed_A 310 TRIYNVVGTIRGSV--EPDRYVILGGHRDSWV--FGAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEFGL 385 (707)
T ss_dssp EEEEEEEEEECCSS--EEEEEEEEEEECCCSS--SCTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTS
T ss_pred EEEEEEEEEEeCCC--CCCceEEEeccccCCC--CCCccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEEEEeCCccccc
Confidence 35789999999974 3568999999999998 7999999999999999999975 578999999999999999999
Q ss_pred cChHHHHhhcc--ccCceeEEEEeccCCCCCCceEEeeCCC-CchhhHhhhhccCccc----ccccccc-----------
Q 004166 203 LGAHGFMKAHK--WRDSVGAVINVEASGTGGLDLVCQSGPS-SWPSSVYAQSAIYPMA----HSAAQDV----------- 264 (770)
Q Consensus 203 ~GS~~fi~~~~--~~~~i~a~INlD~~G~gg~~~lfq~gp~-~~~~~~y~~~~~~p~~----~~l~~e~----------- 264 (770)
.||++|+++|+ +.++++++||+|++|.|+..+.++++|. .+++..+.+.+++|.+ .++.+..
T Consensus 386 ~GS~~~~~~~~~~~~~~~~a~iNlD~~~~g~~~~~~~~sp~l~~~i~~~~~~v~~P~~~~~~~tly~~w~~~~~~~~~~~ 465 (707)
T 3fed_A 386 LGSTEWAEENVKILQERSIAYINSDSSIEGNYTLRVDCTPLLYQLVYKLTKEIPSPDDGFESKSLYESWLEKDPSPENKN 465 (707)
T ss_dssp HHHHHHHHHHHHHHHHHEEEEEECSCSBSCSSEEEEEECGGGHHHHHHHHTTSBCCSTTCTTSBHHHHHHHHSEETTEEE
T ss_pred hhHHHHHHhcchhhhhCEEEEEEecccccCCceEEEecCHHHHHHHHHHHhcCCCCccccccccHHHHHHhhcccccccC
Confidence 99999999885 5789999999999999988889998875 3445555677888875 2332211
Q ss_pred ---CCCCCCCCchHHHhccCCCCcEEEEEEecC-------Cc-cCcCcCcccCCC----CHH--HHHHHHHHHHHHHHHH
Q 004166 265 ---FPVIPGDTDYRIFSQDYGDIPGLDIIFLIG-------GY-YYHTSHDTVDRL----LPG--SVQARGDNLFNVLKAF 327 (770)
Q Consensus 265 ---f~~ips~tD~~~F~~~~~gIPgld~a~~~~-------~~-~YHT~~Dt~d~i----d~~--~lq~~g~~~l~l~~~l 327 (770)
.+...++|||.+|.+ +.|||++++++..+ .| .|||.+||++++ ||+ ..+.+++.+..++.+|
T Consensus 466 ~p~i~~lgsgSD~~~F~~-~~GIPs~~~~f~~~~~~~~~~~y~~YHT~~Dt~~~~~~~~Dp~f~~h~~~a~~~g~l~l~L 544 (707)
T 3fed_A 466 LPRINKLGSGSDFEAYFQ-RLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVEKFYDPTFKKQLSVAQLRGALVYEL 544 (707)
T ss_dssp EECEECCCSSSTTHHHHH-TTCCCEEEEEEECCTTTCCSSSCTTTTSTTCCHHHHHHHTCTTCHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCCCCChHHHHH-hCCcceeccccccCccccccCCCCCcCCCcccHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 123458999999985 79999999999855 45 799999999976 444 5555788888899999
Q ss_pred hcCcCcc-ccchhhh--------h---hhccCCCCCCCeeEccchhHhhhhccHHHHHHHhhhhHHHhhccceEEEEecc
Q 004166 328 SNSSKLQ-NAHDRAS--------F---EATGIKNTDERAIFFDYLTWFMIYYSRSRATVLHGIPIVIFITVPFFLRLLNS 395 (770)
Q Consensus 328 a~a~~l~-~~~~~~~--------~---~~~~~~~~~~~~V~fd~lg~~~v~y~~~~a~~l~~~~~~~~~~~~~~~~~~~~ 395 (770)
++++.+| |..++.. + +...+...+...+.|+.|..++..|.. .|..++.....+....+..+|++|+
T Consensus 545 a~~~vlP~~~~~ya~~l~~~~~~l~~~~~~~~~~l~~~~~~~~~L~~a~~~~~~-~a~~~~~~~~~~~~~~~~~~r~~N~ 623 (707)
T 3fed_A 545 VDSKIIPFNIQDYAEALKNYAASIYNLSKKHDQQLTDHGVSFDSLFSAVKNFSE-AASDFHKRLIQVDLNNPIAVRMMND 623 (707)
T ss_dssp HHCSSCCCCHHHHHHHHHHHHHHHHHHHGGGHHHHHHHTCCCHHHHHHHHHHHH-HHHHHHHHHTTCCTTCHHHHHHHHH
T ss_pred hCCccCCCCHHHHHHHHHHHHHHHHHHHHhhcchhhhcCcCHHHHHHHHHHHHH-HHHHHHHHHHhhhcCCHHHHHHHHH
Confidence 9998887 5433311 1 111111112345788889999999977 4566655433332334556778899
Q ss_pred cchhhHHhHH
Q 004166 396 GLHSWFATYS 405 (770)
Q Consensus 396 ~~~~~~~~~~ 405 (770)
++|.+||.|+
T Consensus 624 ~l~~~Er~fl 633 (707)
T 3fed_A 624 QLMLLERAFI 633 (707)
T ss_dssp HHHHHHHHTB
T ss_pred HHHHHHHHhc
Confidence 9999998654
No 11
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.97 E-value=6.6e-30 Score=274.23 Aligned_cols=264 Identities=17% Similarity=0.198 Sum_probs=193.4
Q ss_pred cCcccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccc
Q 004166 48 LDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRN 127 (770)
Q Consensus 48 ~~~Fs~era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~ 127 (770)
..+++.+++.++|++|+ ++++|..+|+++.++++||.+++++++.... +++++.....+ .+
T Consensus 14 ~~~~~~~~~~~~l~~L~-~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~---~~~~~~~~~~~---------------~~ 74 (299)
T 1rtq_A 14 LPQVDASQITGTISSLE-SFTNRFYTTTSGAQASDWIASEWQALSASLP---NASVKQVSHSG---------------YN 74 (299)
T ss_dssp GGGCCHHHHHHHHHHHH-TSSCCCTTSHHHHHHHHHHHHHHHHHHTTST---TEEEEEEEETT---------------EE
T ss_pred HHhcCHHHHHHHHHHHh-CcCCCCCCCchHHHHHHHHHHHHHHhcCCcc---cceeeeeccCC---------------CC
Confidence 35789999999999999 7899999999888999999999999874221 24444321111 23
Q ss_pred cceEEEEEeCCCCCCCCCeEEEeecCCCCCC--------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCccc
Q 004166 128 HTNIVMRISSTDSQDTDPSVLMNGHFDGPLS--------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEE 199 (770)
Q Consensus 128 ~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~--------s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE 199 (770)
..||+++++|++ .+++.|+++||+|+|+. ++||.||++|+|++||++|.|++.+++++++|+|+++++||
T Consensus 75 ~~nvi~~~~g~~--~~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE 152 (299)
T 1rtq_A 75 QKSVVMTITGSE--APDEWIVIGGHLDSTIGSHTNEQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAEE 152 (299)
T ss_dssp EEEEEEEECCSS--EEEEEEEEEEECCCCSSTTCCTTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGG
T ss_pred CceEEEEEECCC--CCCCEEEEEeccccCCCcCcCCCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCcc
Confidence 479999999863 13478999999999973 79999999999999999999999888899999999999999
Q ss_pred CCccChHHHHhhccc-cCceeEEEEeccCCCCC--CceEEeeCCC-CchhhHhhhhccCccccccccccCCCCCCCCchH
Q 004166 200 LFMLGAHGFMKAHKW-RDSVGAVINVEASGTGG--LDLVCQSGPS-SWPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYR 275 (770)
Q Consensus 200 ~gl~GS~~fi~~~~~-~~~i~a~INlD~~G~gg--~~~lfq~gp~-~~~~~~y~~~~~~p~~~~l~~e~f~~ips~tD~~ 275 (770)
.|+.||+.|+++++. .++++++||+|+.|..| +.+.+...+. +.+.+...+.+. .+...+..........+|||.
T Consensus 153 ~g~~Gs~~~~~~~~~~~~~~~~~i~~D~~g~~g~~~~i~~~~~~~~~~l~~~l~~~a~-~~~~~i~~~~~~~~~~~sD~~ 231 (299)
T 1rtq_A 153 VGLRGSQDLANQYKSEGKNVVSALQLDMTNYKGSAQDVVFITDYTDSNFTQYLTQLMD-EYLPSLTYGFDTCGYACSDHA 231 (299)
T ss_dssp GTSHHHHHHHHHHHHTTCEEEEEEECSCCSCCCSSSSEEEECTTSCHHHHHHHHHHHH-HHCTTCCEEEECCSSCCSTHH
T ss_pred CCchhHHHHHHhhhhccccEEEEEEecCCCCCCCCcceEEEeCCCCchHHHHHHHHHH-HhCccCCcccCCCCCCCCcHH
Confidence 999999999997753 47899999999998643 2344433221 212111111000 000001101001112579999
Q ss_pred HHhccCCCCcEEEEEE---ecCCccCcCcCcccCCCCH--HHHHHHHHHHHHHHHHHhcCcCccc
Q 004166 276 IFSQDYGDIPGLDIIF---LIGGYYYHTSHDTVDRLLP--GSVQARGDNLFNVLKAFSNSSKLQN 335 (770)
Q Consensus 276 ~F~~~~~gIPgld~a~---~~~~~~YHT~~Dt~d~id~--~~lq~~g~~~l~l~~~la~a~~l~~ 335 (770)
+|.+ .|||++.+.. .....+|||+.||++++|+ ..++++++.+.+++.+|++++.+.+
T Consensus 232 ~f~~--~GiP~~~~~~~~~~~~~~~yHt~~Dt~~~~d~~~~~~~~~~~l~~~~~~~La~~~~~~~ 294 (299)
T 1rtq_A 232 SWHN--AGYPAAMPFESKFNDYNPRIHTTQDTLANSDPTGSHAKKFTQLGLAYAIEMGSATGDTP 294 (299)
T ss_dssp HHHH--TTCCEECEESSCGGGSCTTTTSTTCCGGGSCTTCHHHHHHHHHHHHHHHHHHHCCC---
T ss_pred HHHH--CCCCEEEecccccccCCCCCCCccccccccCccHHHHHHHHHHHHHHHHHHhCCCcCCC
Confidence 9986 7999986542 1223589999999999998 5889999999999999999876653
No 12
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.95 E-value=5.5e-27 Score=264.83 Aligned_cols=200 Identities=21% Similarity=0.215 Sum_probs=156.7
Q ss_pred cccceEEEEEeCCCCCCCCCeEEEeecCCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccCh
Q 004166 126 RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGA 205 (770)
Q Consensus 126 ~~~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE~gl~GS 205 (770)
....||+++++|++ .+++.|+++||+|||+.++||.||++|+|++||++|.|++.+++|+|+|+|++|++||.|+.||
T Consensus 233 ~~~~Nvi~~~~g~~--~~~~~i~~~aH~Ds~~~g~Ga~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~Gs 310 (444)
T 3iib_A 233 TTSYNVIAEVKGST--KADEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLGG 310 (444)
T ss_dssp EEEEEEEEEECCST--EEEEEEEEEEECCCCSSSCCTTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHHH
T ss_pred ceeEEEEEEEeCCC--CCCCEEEEEeecccCCCCCCCccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcCH
Confidence 35689999999974 2467899999999999999999999999999999999999888999999999999999999999
Q ss_pred HHHHhhccc-cCceeEEEEeccCCCCCCceEEeeCCC-CchhhHhhhhccCccccccccccCCCCCCCCchHHHhccCCC
Q 004166 206 HGFMKAHKW-RDSVGAVINVEASGTGGLDLVCQSGPS-SWPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYRIFSQDYGD 283 (770)
Q Consensus 206 ~~fi~~~~~-~~~i~a~INlD~~G~gg~~~lfq~gp~-~~~~~~y~~~~~~p~~~~l~~e~f~~ips~tD~~~F~~~~~g 283 (770)
+.|++++.. .+++.+++|+|+.|.....+.++.++. ..+.+.+.+.. .+.+... + +....++|||.+|.+ .|
T Consensus 311 ~~~~~~~~~~~~~~~~~~n~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~--~-~~~~~~~SD~~~f~~--~G 384 (444)
T 3iib_A 311 KTYAKEHEAELEKHYIAAESDFGAGPIYQIDWRVADTAHSPVINAMKVA-EPLGVAA--G-NNKASGGPDVSMLPA--LG 384 (444)
T ss_dssp HHHHHHTGGGGGGEEEEEECCSTTCCEEEEEEECCHHHHHHHHHHGGGG-GGGTCEE--C-CSCCCCCGGGTTSGG--GT
T ss_pred HHHHHhhHhhhhceeEEEECcCCCCcceEEEeecChhhHHHHHHHHHHH-hhcCCcc--c-cCCCCCCCccHHHHH--CC
Confidence 999998843 368999999998654333333333222 22233333221 1221111 0 223456899999986 79
Q ss_pred CcEEEEEEecCC--ccCcCcCcccCCCCHHHHHHHHHHHHHHHHHHhcCcCc
Q 004166 284 IPGLDIIFLIGG--YYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNSSKL 333 (770)
Q Consensus 284 IPgld~a~~~~~--~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~a~~l 333 (770)
||++++...... .+|||+.||+|++|++.+++.++.+..++..++++++.
T Consensus 385 iP~~~l~~~~~~~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~lA~~~~~ 436 (444)
T 3iib_A 385 VPVASLRQDGSDYFDYHHTPNDTLDKINPEALAQNVAVYAQFAWVMANSKVE 436 (444)
T ss_dssp CCEEEEEECCTTGGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred CCEEEeecCCCcCCCCCCCCccccccCCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999998765433 37999999999999999999999999999999997653
No 13
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.94 E-value=6.4e-26 Score=254.53 Aligned_cols=205 Identities=20% Similarity=0.227 Sum_probs=156.3
Q ss_pred ccceEEEEEeCCCC-CCCCCeEEEeecCCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccCh
Q 004166 127 NHTNIVMRISSTDS-QDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGA 205 (770)
Q Consensus 127 ~~~NVi~~i~g~~~-~~~~~~Vll~aH~Dsv~~s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE~gl~GS 205 (770)
...||+++++|+++ ..+++.|++++|+|||+.++||.||++|+|++||++|.|++. +++++|+|++|++||.|+.||
T Consensus 202 ~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g~Ga~D~~~G~a~~le~~~~l~~~--~~~~~i~~~~~~~EE~g~~Gs 279 (421)
T 2ek8_A 202 TSHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAPGANDDASGVAVTLELARVMSKL--KTDTELRFITFGAEENGLIGS 279 (421)
T ss_dssp EEEEEEEEECCCSSTTCCCCEEEEEEECCCCTTCCCTTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEESSSTTTSHHH
T ss_pred cccceEEEecCcccCCCCCCEEEEecccccCCCCCCCCCCcHhHHHHHHHHHHHhcc--CCCceEEEEEECCccccchhH
Confidence 46899999999643 235689999999999999999999999999999999999874 678999999999999999999
Q ss_pred HHHHhhcc--ccCceeEEEEeccCCCCCC-ceEEeeCCC-CchhhHhhhhccCccccccccccCCCCCCCCchHHHhccC
Q 004166 206 HGFMKAHK--WRDSVGAVINVEASGTGGL-DLVCQSGPS-SWPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYRIFSQDY 281 (770)
Q Consensus 206 ~~fi~~~~--~~~~i~a~INlD~~G~gg~-~~lfq~gp~-~~~~~~y~~~~~~p~~~~l~~e~f~~ips~tD~~~F~~~~ 281 (770)
+.|+++++ +.+++.++||+|++|.++. ......+.+ +.+...+.+....+.+.. . .....++|||.+|.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~in~D~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~--~~~~~~~SD~~~F~~-- 353 (421)
T 2ek8_A 280 KKYAASLSEDEIKRTIGMFQLDMVGSKDAGDLIMYTIDGKKNRVTDLGAAASSRLSGV--L--PYGQEGRSDHESFHA-- 353 (421)
T ss_dssp HHHHTTCCHHHHHHEEEEEEECSCCBTTSCEEEEEETTSCCCHHHHHHHHHHHHHTSC--C--CEEECCSSTHHHHHT--
T ss_pred HHHHHhCccchhhcEEEEEEecccCCCCCcceEEecCCCccccchhhHHHHHHhcCCC--C--CCCCCCCCccHHHHH--
Confidence 99999874 3578999999999998765 333333322 112111111110111100 0 011235799999985
Q ss_pred CCCcEEEEEEecCCccCcCcCcccCCCCHHHHHHHHHHHHHHHHHHhcCcCcc-ccchh
Q 004166 282 GDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNSSKLQ-NAHDR 339 (770)
Q Consensus 282 ~gIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~a~~l~-~~~~~ 339 (770)
.|||++.+.......+|||++||++++|++.+++.++.+..++..+++.+.++ ++.++
T Consensus 354 ~GIP~~~~~~~~~~~~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~~la~~~~~p~~~~~y 412 (421)
T 2ek8_A 354 LGIPAALFIHAPVEPWYHTPNDTLDKISKEKLDNVADIVGSAVYQAARPGELVIEPIDY 412 (421)
T ss_dssp TTCCEEEEEEESCCTTTTSTTCCGGGBCHHHHHHHHHHHHHHHHHHHSSSCCCCCCCCC
T ss_pred CCCCEEEEECCcCCCCCCCcccchhhCCHHHHHHHHHHHHHHHHHHhCCCccCCChhhh
Confidence 89999977644444579999999999999999999999999999999988776 44433
No 14
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=99.85 E-value=3.1e-20 Score=202.93 Aligned_cols=199 Identities=15% Similarity=0.131 Sum_probs=144.9
Q ss_pred ceeEEEEEeeecCcccceeccccccccccccceEEEEEeCCCCCCCCCeEEEeecCCCCCCCCCCCCChhHHHHHHHHHH
Q 004166 98 KFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELAR 177 (770)
Q Consensus 98 ~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~s~GA~D~~sgva~~LE~ar 177 (770)
++++.++.....|... ..+++ ++|+ .++.|+++||+|| | .+|+||+||+|+++|++|
T Consensus 153 ~y~V~IdS~l~~G~l~--------------y~e~~--ipG~----t~~~IllsaH~cH-P--~~ANDNaSG~a~lleLar 209 (435)
T 3k9t_A 153 DYEVVIDSSLEDGSLT--------------YGEYY--IRGE----LEEEILLTTYTCH-P--SMCNDNLSGVALITFIAK 209 (435)
T ss_dssp EEEEEEEEEEESCEEE--------------EEEEE--ECCS----SSCEEEEEEECCC-C--SCTTTTHHHHHHHHHHHH
T ss_pred cEEEEEeeeecCCceE--------------EEEEE--ecCC----CCCEEEEEEEcCC-C--CCCCccchHHHHHHHHHH
Confidence 3788887766555311 12222 5885 3478999999998 3 269999999999999999
Q ss_pred HHHhcCCCCCCCEEEEEeCcccCCccChHHHHhhccc-cCceeEEEEeccCCCCCCceEEeeCCC-CchhhH-hhhhccC
Q 004166 178 LTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKW-RDSVGAVINVEASGTGGLDLVCQSGPS-SWPSSV-YAQSAIY 254 (770)
Q Consensus 178 ~l~~~~~~~~~~I~flf~~~EE~gl~GS~~fi~~~~~-~~~i~a~INlD~~G~gg~~~lfq~gp~-~~~~~~-y~~~~~~ 254 (770)
.|++. +++++++|+|++ |..||..|+++|+. .+++++.+|+||+|.++.. .+..++. +...+. .+....+
T Consensus 210 ~l~~~--~~~~t~rFvf~p----g~iGS~~yl~~~~~~l~~i~a~lnLDmVGd~~~~-~y~~sr~g~~~~d~~~~~vl~~ 282 (435)
T 3k9t_A 210 ALSKL--KTKYSYRFLFAP----ETIGSITWLSRNEDKLKNIKMGLVATCVGDAGIK-NYKRTKFGDAEIDKIVEKVLMH 282 (435)
T ss_dssp HHTTS--CCSSEEEEEEEC----TTHHHHHHHHHCGGGGGGEEEEEECCSCCSSSCE-EEECCTTSSSHHHHHHHHHHHH
T ss_pred HHhcC--CCCceEEEEEcC----ccHHHHHHHHhChHhhhceEEEEEEEEecCCCCc-eeecCCCCChHHHHHHHHHHhh
Confidence 99864 589999999998 68999999998853 4699999999999987643 3343332 333221 1111111
Q ss_pred ccccccccccCCCCCCCCchHHHhccCCC--CcEEEEEEecCC-ccCcCcCcccCCCCHHHHHHHHHHHHHHHHHHhcCc
Q 004166 255 PMAHSAAQDVFPVIPGDTDYRIFSQDYGD--IPGLDIIFLIGG-YYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNSS 331 (770)
Q Consensus 255 p~~~~l~~e~f~~ips~tD~~~F~~~~~g--IPgld~a~~~~~-~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~a~ 331 (770)
. . .....+...|.+|||++|.. .| ||...+.....+ ..|||+.||+|+|+++.|+...+.+.+.++.|.+..
T Consensus 283 ~-~--~~~~~~~f~~~GSDh~qF~s--pG~dIPv~~~~r~~~~~peYHTs~Dtld~ISpe~L~~s~~iv~~~i~~Le~n~ 357 (435)
T 3k9t_A 283 C-G--SEYYVADFFPWGSDERQFSS--PGINLSVGSLMRSCYGFDGYHTSADNLCYMNKDGLADSYKTYLEVIYTIENNR 357 (435)
T ss_dssp S-S--SCEEEECCCSCSSTHHHHTS--TTTCCCEEEEESSCTTCTTTTBTTSSGGGCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred c-C--CCCceecCCCCCCcchhHhh--CCCCCCEEEEecCCCCCcccCCCcCChhhCCHHHHHHHHHHHHHHHHHhhccc
Confidence 0 0 00011123457899999986 68 999987754333 379999999999999999999999999999997643
No 15
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.70 E-value=4.9e-16 Score=163.84 Aligned_cols=232 Identities=16% Similarity=0.142 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceEEE
Q 004166 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (770)
Q Consensus 54 era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi~ 133 (770)
+++.+.+++|. ++ +..|.+++.+++||.++|+++| ++++.+. . .+..|+++
T Consensus 6 ~~~~~~l~~lv-~i---ps~s~~e~~~~~~l~~~l~~~G------~~~~~~~--~-----------------~~~~nv~a 56 (269)
T 4h2k_A 6 EKVVSLAQDLI-RR---PSISPNDEGCQQIIAERLEKLG------FQIEWMP--F-----------------NDTLNLWA 56 (269)
T ss_dssp HHHHHHHHHHH-TS---CCBTTCCTTHHHHHHHHHHTTT------CEEEECC--B-----------------TTBCEEEE
T ss_pred HHHHHHHHHHh-CC---CCCCCCcHHHHHHHHHHHHHcC------CeEEEEE--c-----------------CCceEEEE
Confidence 45667777777 33 4455556678999999999998 4444321 1 12469999
Q ss_pred EEeCCCCCCCCCeEEEeecCCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEE
Q 004166 134 RISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (770)
Q Consensus 134 ~i~g~~~~~~~~~Vll~aH~Dsv~~---------------------s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~f 192 (770)
++ |+ +.+.|++.+|+|+||. ++|+.||++|++++|++++.|++.+.+++++|+|
T Consensus 57 ~~-g~----~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~ 131 (269)
T 4h2k_A 57 KH-GT----SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIAL 131 (269)
T ss_dssp EE-CS----SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEE
T ss_pred Ee-CC----CCCEEEEEeeecccCCCCcccccCCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccEEE
Confidence 98 53 2468999999999985 3699999999999999999998877778899999
Q ss_pred EEeCcccCCcc-ChHHHHhhcc-ccCceeEEEEeccCCCC--CCceE-EeeCCC-----CchhhHhhhhccCcccccccc
Q 004166 193 LFNGAEELFML-GAHGFMKAHK-WRDSVGAVINVEASGTG--GLDLV-CQSGPS-----SWPSSVYAQSAIYPMAHSAAQ 262 (770)
Q Consensus 193 lf~~~EE~gl~-GS~~fi~~~~-~~~~i~a~INlD~~G~g--g~~~l-fq~gp~-----~~~~~~y~~~~~~p~~~~l~~ 262 (770)
+|+.+||.|.. ||+.++++.. ...+.+++|+.|..+.. +..+. -+.|.+ ..+.+...+.+..-.+ +..
T Consensus 132 ~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~Ept~~~~~~~~i~~g~~G~G~~~~~~~l~~~l~~aa~~~~g--i~~ 209 (269)
T 4h2k_A 132 LITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGGGFLTKPGKLLDSITSAIEETIG--ITP 209 (269)
T ss_dssp EEESCSSSCCTTSHHHHHHHHHHTTCCCCEEEECCCCBSSSTTSEEECSCTTCC------HHHHHHHHHHHHHHS--CCC
T ss_pred EEEeccccCcccCHHHHHHHHHhcCCCCCEEEEECCCCCCcCCceeEEecccccccCCCcHHHHHHHHHHHHHhC--CCC
Confidence 99999999985 9999987542 23678899999977432 11111 011111 1122222111110000 000
Q ss_pred ccCCCCCCCCchHHHhccCCCCcEEEEEEecCCccCcCcCcccCCCCHHHHHHHHHHHHHHHHHHhc
Q 004166 263 DVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSN 329 (770)
Q Consensus 263 e~f~~ips~tD~~~F~~~~~gIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (770)
.. .....+||.+.+.+ .|+|.+.+.... + ++||+.+ +++.+.+++..+.+.++++.+.+
T Consensus 210 ~~-~~~gggtDa~~~~~--~g~p~~~~~~~~-~-~~Hs~~E---~v~~~d~~~~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 210 KA-ETGGGTSDGRFIAL--MGAEVVEFGPLN-S-TIHKVNE---CVSVEDLGKCGEIYHKMLVNLLD 268 (269)
T ss_dssp EE-ECC--CHHHHHHHT--TTCEEEECCSBC-T-TTTSTTC---EEEHHHHHHHHHHHHHHHHHHC-
T ss_pred EE-ecCCCCchHHHHHh--hCCCEEEEEeCC-C-CCcCCcc---cccHHHHHHHHHHHHHHHHHHhh
Confidence 00 11235899999864 799998865433 3 4699985 67899999999999999987753
No 16
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.68 E-value=5.9e-16 Score=163.02 Aligned_cols=232 Identities=17% Similarity=0.103 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceEEE
Q 004166 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (770)
Q Consensus 54 era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi~ 133 (770)
+++.+.+++|. ++ +..|.+++.+++||.++++++|. +++... . .+..|+++
T Consensus 6 ~~~~~~l~~lv-~i---ps~s~~e~~~~~~l~~~l~~~G~------~~~~~~--~-----------------~~~~nv~a 56 (268)
T 3t68_A 6 SPVLALAKELI-SR---QSVTPADAGCQDLMIERLKALGF------EIESMV--F-----------------EDTTNFWA 56 (268)
T ss_dssp CHHHHHHHHHH-TS---CCBTTCCTTHHHHHHHHHHHTTC------EECCCE--E-----------------TTEEC-CE
T ss_pred HHHHHHHHHHh-CC---CCCCCCchHHHHHHHHHHHHCCC------eEEEEe--c-----------------CCccEEEE
Confidence 46788888888 43 33455556789999999999983 333211 1 12369999
Q ss_pred EEeCCCCCCCCCeEEEeecCCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEE
Q 004166 134 RISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (770)
Q Consensus 134 ~i~g~~~~~~~~~Vll~aH~Dsv~~---------------------s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~f 192 (770)
++ |+ +.+.|++.+|+|+||. ++|+.||++|++++|++++.|++.+.+++++|+|
T Consensus 57 ~~-g~----~~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~ 131 (268)
T 3t68_A 57 RR-GT----QSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGF 131 (268)
T ss_dssp EE-CS----SSCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEE
T ss_pred Ee-CC----CCCeEEEEccccccCCCCcccCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcEEE
Confidence 98 53 2468999999999985 3699999999999999999998877778899999
Q ss_pred EEeCcccCCc-cChHHHHhhcc-ccCceeEEEEeccCCCC--CCce-EEeeC-----CCCchhhHhhhhccCcccccccc
Q 004166 193 LFNGAEELFM-LGAHGFMKAHK-WRDSVGAVINVEASGTG--GLDL-VCQSG-----PSSWPSSVYAQSAIYPMAHSAAQ 262 (770)
Q Consensus 193 lf~~~EE~gl-~GS~~fi~~~~-~~~~i~a~INlD~~G~g--g~~~-lfq~g-----p~~~~~~~y~~~~~~p~~~~l~~ 262 (770)
+|+.+||.|. .||+.++++.. ...+.+++|++|..+.. +..+ ..+.| +++.+.+...+.+..-.+-.. +
T Consensus 132 ~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~~ept~~~~~~~~i~~g~~G~p~~~~~~~l~~~l~~a~~~~~gi~~-~ 210 (268)
T 3t68_A 132 LITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRRGGGFLTDTGELLAAVVAAVEEVNHQAP-A 210 (268)
T ss_dssp EEESCTTSSSCCHHHHHHHHHHHTTCCCCEEEECSCCBSSSTTSEEEECCGGGGTSCCCCHHHHHHHHHHHHHHSSCC-E
T ss_pred EEEeCCccCcccCHHHHHHHHHhcCCCCCEEEEeCCCCCccCCceeEEecCCCcccCCchHHHHHHHHHHHHHhCCCc-E
Confidence 9999999988 59999987542 24678899999987532 1111 11111 111122222211110000000 0
Q ss_pred ccCCCCCCCCchHHHhccCCCCcEEEEEEecCCccCcCcCcccCCCCHHHHHHHHHHHHHHHHHHhc
Q 004166 263 DVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSN 329 (770)
Q Consensus 263 e~f~~ips~tD~~~F~~~~~gIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (770)
......+||+..|.+ .|+|++.+.... ..+||+.+ +++...+++..+.+.++++.+.+
T Consensus 211 --~~~sgggtD~~~~~~--~g~p~~~~~~~~--~~~Hs~~E---~v~~~d~~~~~~vl~~~l~~l~~ 268 (268)
T 3t68_A 211 --LLTTGGTSDGRFIAQ--MGAQVVELGPVN--ATIHKVNE---CVRIADLEKLTDMYQKTLNHLLG 268 (268)
T ss_dssp --EESSCCCHHHHHHHH--HTCEEEECCSBC--TTTTSTTC---EEEHHHHHHHHHHHHHHHHHHHC
T ss_pred --EecCccccHHHHHHh--cCCCEEEEeeCC--CCCCCccc---cccHHHHHHHHHHHHHHHHHHhC
Confidence 011235899999975 699988764322 34699985 66789999999999999988753
No 17
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.61 E-value=9e-15 Score=147.24 Aligned_cols=146 Identities=21% Similarity=0.211 Sum_probs=113.2
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccc
Q 004166 50 RFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHT 129 (770)
Q Consensus 50 ~Fs~era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~ 129 (770)
.++.+++.+.+++|. ++.. +.++++++++++|+.+++++++ ++++.+... . +..
T Consensus 6 ~~~~~~~~~~l~~lv-~i~s-~s~~~~e~~~~~~l~~~l~~~g------~~~~~~~~~-~-----------------g~~ 59 (198)
T 1q7l_A 6 PEEEHPSVTLFRQYL-RIRT-VQPKPDYGAAVAFFEETARQLG------LGCQKVEVA-P-----------------GYV 59 (198)
T ss_dssp -CCCCHHHHHHHHHH-TSCC-BTTSCCHHHHHHHHHHHHHHHT------CEEEEEEEE-T-----------------TEE
T ss_pred chhHHHHHHHHHHHh-cCCC-CCCCcCHHHHHHHHHHHHHHCC------CeEEEEEcC-C-----------------CCe
Confidence 456678999999999 5543 4444466789999999999998 445443211 1 236
Q ss_pred eEEEEEeCCCCCCCCCeEEEeecCCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCC
Q 004166 130 NIVMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPR 188 (770)
Q Consensus 130 NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~---------------------s~GA~D~~sgva~~LE~ar~l~~~~~~~~~ 188 (770)
|++++++|+++ +.+.|++.+|+|+|+. ++|+.||++|++++|++++.|++.+.++++
T Consensus 60 ~~i~~~~g~~~--~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~~~ 137 (198)
T 1q7l_A 60 VTVLTWPGTNP--TLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPR 137 (198)
T ss_dssp EEEEEECCSST--TSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred EEEEEEccCCC--CCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCCCC
Confidence 99999988642 2468999999999874 478899999999999999999998888899
Q ss_pred CEEEEEeCcccCC-ccChHHHHhhccc-cCceeEEEE
Q 004166 189 PIIFLFNGAEELF-MLGAHGFMKAHKW-RDSVGAVIN 223 (770)
Q Consensus 189 ~I~flf~~~EE~g-l~GS~~fi~~~~~-~~~i~a~IN 223 (770)
+|+|+|+.+||.| +.|++.+++++.. ..+..+++|
T Consensus 138 ~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~~~~id 174 (198)
T 1q7l_A 138 TIHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALD 174 (198)
T ss_dssp CEEEEEESCGGGTSTTTHHHHTTSHHHHTTCEEEEEE
T ss_pred CEEEEEEcccccCccccHHHHHHhHHhccCCcCEEEe
Confidence 9999999999997 7999999875432 234566664
No 18
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.53 E-value=1.2e-13 Score=152.43 Aligned_cols=227 Identities=16% Similarity=0.205 Sum_probs=150.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceEEE
Q 004166 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (770)
Q Consensus 54 era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi~ 133 (770)
+++.+.+++|+ ++.. ++| .++++++||.+++++++ .+++++ +..|+++
T Consensus 7 ~~~~~~l~~L~-~~~s-~sg--~e~~~~~~l~~~l~~~g------~~~~~d----------------------~~gnlia 54 (373)
T 1vhe_A 7 DETLTMLKDLT-DAKG-IPG--NEREVRQVMKSYIEPFA------DEVTTD----------------------RLGSLIA 54 (373)
T ss_dssp CHHHHHHHHHH-HSCC-CTT--CCHHHHHHHHHHHGGGC------SEEEEC----------------------TTCCEEE
T ss_pred HHHHHHHHHHH-cCCC-CCC--chHHHHHHHHHHHHhhC------CEEEEc----------------------CCCcEEE
Confidence 35788899999 4433 333 34588999999999998 344432 1258999
Q ss_pred EEeCCCCCCCCCeEEEeecCCCCC--------------------------------------------------------
Q 004166 134 RISSTDSQDTDPSVLMNGHFDGPL-------------------------------------------------------- 157 (770)
Q Consensus 134 ~i~g~~~~~~~~~Vll~aH~Dsv~-------------------------------------------------------- 157 (770)
+++|++ ..+.|++++|+|+|+
T Consensus 55 ~~~g~~---~~~~vll~aH~D~v~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~ 131 (373)
T 1vhe_A 55 KKTGAE---NGPKIMIAGHLDEVGFMVTQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEAR 131 (373)
T ss_dssp EEESST---TSCEEEEEEECCCCEEEEEEECTTSCEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTTTT
T ss_pred EecCCC---CCceEEEEecCCcCCEEEEEECCCCeEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchhhc
Confidence 998852 246799999999997
Q ss_pred -------------------------CCCC---------------------CCCChhHHHHHHHHHHHHHhcCCCCCCCEE
Q 004166 158 -------------------------SSPG---------------------AGDCGSCVASMLELARLTIDSGWIPPRPII 191 (770)
Q Consensus 158 -------------------------~s~G---------------------A~D~~sgva~~LE~ar~l~~~~~~~~~~I~ 191 (770)
..+| +.||++|+|++|+++|.+++.+ ++++|+
T Consensus 132 ~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~--~~~~v~ 209 (373)
T 1vhe_A 132 KKSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTD--HPNIVY 209 (373)
T ss_dssp TSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTSC--CSSEEE
T ss_pred cCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCCeEEeccCccHHHHHHHHHHHHHHhhcC--CCceEE
Confidence 0112 7999999999999999998763 668999
Q ss_pred EEEeCcccCCccChHHHHhhccccCceeEEEEeccCCCCCC----------------ceEE-eeC--CCCchhhHhhhhc
Q 004166 192 FLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGGL----------------DLVC-QSG--PSSWPSSVYAQSA 252 (770)
Q Consensus 192 flf~~~EE~gl~GS~~fi~~~~~~~~i~a~INlD~~G~gg~----------------~~lf-q~g--p~~~~~~~y~~~~ 252 (770)
|+|+++||.|..|++.+.... +.+.+|++|+.+.++. .+.. ..+ .++.+.+...+.+
T Consensus 210 ~~~~~~EE~G~~G~~~~~~~~----~~d~~i~~d~~~~~~~~g~~~~~~~~~lg~G~~i~~~~~~~~~~~~l~~~l~~~a 285 (373)
T 1vhe_A 210 GVGTVQEEVGLRGAKTAAHTI----QPDIAFGVDVGIAGDTPGISEKEAQSKMGKGPQIIVYDASMVSHKGLRDAVVATA 285 (373)
T ss_dssp EEEESCCTTTSHHHHHHHHHH----CCSEEEEEEEEECCCSTTCCTTTCCCCTTSCCEEEEEETTEECCHHHHHHHHHHH
T ss_pred EEEECCcccChhhHHHHhccc----CCCEEEEEeccccCCCCCCcccccccccCCCceEEEeCCCCCCCHHHHHHHHHHH
Confidence 999999999999999886422 3467899998754321 1100 000 0111122111111
Q ss_pred cCccccccccccCCCCCCCCchHHHhccCCCCcEEEEEEecCCccCcCcCcccCCCCHHHHHHHHHHHHHHHHHHhc
Q 004166 253 IYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSN 329 (770)
Q Consensus 253 ~~p~~~~l~~e~f~~ips~tD~~~F~~~~~gIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (770)
.. .+-....+. ..+.+||...|.....|+|.+++.... ..+||+. |+++.+.+++..+.+.++++.+..
T Consensus 286 ~~-~gi~~~~~~--~~~ggtDa~~~~~~~~GiPtv~lg~~~--~~~Hs~~---E~v~~~dl~~~~~ll~~~l~~l~~ 354 (373)
T 1vhe_A 286 EE-AGIPYQFDA--IAGGGTDSGAIHLTANGVPALSITIAT--RYIHTHA---AMLHRDDYENAVKLITEVIKKLDR 354 (373)
T ss_dssp HH-HTCCCEEEE--ETTCCCTHHHHTTSTTCCCEEEEEEEE--BSTTSSC---EEEEHHHHHHHHHHHHHHHHHCCH
T ss_pred HH-cCCCeEEec--CCCCCccHHHHHHhCCCCcEEEEcccc--ccCCChh---heecHHHHHHHHHHHHHHHHHhcH
Confidence 00 000000001 124689999993212699999875432 2479985 667899999999999999988754
No 19
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.50 E-value=1.3e-13 Score=150.74 Aligned_cols=152 Identities=15% Similarity=0.088 Sum_probs=98.9
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccChHHHHhhccccCceeEEEEeccCCCCCC-c-------
Q 004166 162 AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGGL-D------- 233 (770)
Q Consensus 162 A~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE~gl~GS~~fi~~~~~~~~i~a~INlD~~G~gg~-~------- 233 (770)
|.||++|+|++|++++.+++ ++++++|+|+++||.|..|++.+... .+...+|++|+.+.++. .
T Consensus 180 a~D~k~g~a~~l~a~~~l~~----~~~~i~~~~~~~EE~g~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~~g~ 251 (353)
T 1y0y_A 180 AFDDRIAVYTILEVAKQLKD----AKADVYFVATVQEEVGLRGARTSAFG----IEPDYGFAIDVTIAADIPGTPEHKQV 251 (353)
T ss_dssp THHHHHHHHHHHHHHHHCCS----CSSEEEEEEESCCTTTSHHHHHHHHH----HCCSEEEEEEEEECCCSTTCCGGGCC
T ss_pred cCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccchhHHHHHhhc----cCCCEEEEEecccccCCCCCccccCc
Confidence 69999999999999999864 67899999999999999999988642 24568899998754321 0
Q ss_pred --------eEE-eeC--CCCchhhHhhhhccCccccccccccCCCCCCCCchHHHhccCCCCcEEEEEEecCCccCcCcC
Q 004166 234 --------LVC-QSG--PSSWPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSH 302 (770)
Q Consensus 234 --------~lf-q~g--p~~~~~~~y~~~~~~p~~~~l~~e~f~~ips~tD~~~F~~~~~gIPgld~a~~~~~~~YHT~~ 302 (770)
+.. ..+ .++.+.+...+.+.. .+-.. + .....+.+||...|.....|+|.+++... . ..+||+.
T Consensus 252 ~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a~~-~gi~~-~-~~~~~~ggsDa~~~~~~~~GiPtv~lg~~-~-~~~Hs~~ 326 (353)
T 1y0y_A 252 THLGKGTAIKIMDRSVICHPTIVRWLEELAKK-HEIPY-Q-LEILLGGGTDAGAIHLTKAGVPTGALSVP-A-RYIHSNT 326 (353)
T ss_dssp CCTTSCEEEEEEETTEECCHHHHHHHHHHHHH-TTCCE-E-EEECSSCCCTHHHHTTSTTCCCEEEEEEE-E-BSCSSSC
T ss_pred cccCCCcEEEEeCCCCCCCHHHHHHHHHHHHH-cCCCE-E-EeecCCCCchHHHHHHhCCCCcEEEEccc-c-cccCCHH
Confidence 100 000 011112211111100 00000 0 00113468999999321269999987643 2 3589975
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHHHhc
Q 004166 303 DTVDRLLPGSVQARGDNLFNVLKAFSN 329 (770)
Q Consensus 303 Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (770)
|+++.+.+++..+.+.++++.+..
T Consensus 327 ---E~v~~~dl~~~~~ll~~~l~~l~~ 350 (353)
T 1y0y_A 327 ---EVVDERDVDATVELMTKALENIHE 350 (353)
T ss_dssp ---EEEEHHHHHHHHHHHHHHHHHGGG
T ss_pred ---HhcCHHHHHHHHHHHHHHHHhhhh
Confidence 666788999999999999988754
No 20
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.49 E-value=1.8e-13 Score=148.21 Aligned_cols=147 Identities=15% Similarity=0.040 Sum_probs=97.6
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccChHHHHhhccccCceeEEEEeccCCCCC----------
Q 004166 162 AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGG---------- 231 (770)
Q Consensus 162 A~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE~gl~GS~~fi~~~~~~~~i~a~INlD~~G~gg---------- 231 (770)
+.||++|+|++|+++|.+++.+ ++++|.|+|+++||.|..|++.++.. .+.+.+|++|+.+...
T Consensus 171 a~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~~G~~~~~~~----~~~~~~i~~d~~~~~~~p~~~~~lg~ 244 (332)
T 2wyr_A 171 GLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGLKGAKFLANH----YYPQYAFAIDSFACCSPLTGDVKLGK 244 (332)
T ss_dssp THHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTSHHHHHHTTT----CCCSEEEEECCEECCSGGGTTCCTTS
T ss_pred cCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCcchHHHHhcc----cCCCEEEEEecccccCCCCCceeeCC
Confidence 6999999999999999998764 66899999999999999999988742 3457899999876431
Q ss_pred -CceEE-eeC-C-CCchhhHhhhhccCccccccccccCCCCCCCCchHHHhccCCCCcEEEEEEecCCccCcCcCcccCC
Q 004166 232 -LDLVC-QSG-P-SSWPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDR 307 (770)
Q Consensus 232 -~~~lf-q~g-p-~~~~~~~y~~~~~~p~~~~l~~e~f~~ips~tD~~~F~~~~~gIPgld~a~~~~~~~YHT~~Dt~d~ 307 (770)
..+.. ..+ + ++.+.+...+.+.. .+..... ...+.+||...|.+ |+|.+++... ...+||+. |+
T Consensus 245 G~~i~~~d~~~~~~~~l~~~l~~~~~~-~gi~~~~---~~~~ggtDa~~~~~---GiPtv~lg~~--~~~~Hs~~---E~ 312 (332)
T 2wyr_A 245 GPVIRAVDNSAIYSRDLARKVWSIAEK-NGIEIQI---GVTGGGTDASAFQD---RSKTLALSVP--IKYLHSEV---ET 312 (332)
T ss_dssp CCEEEEECSSCBCCHHHHHHHHHHHHH-TTCCCEE---EECSSCCGGGGGTT---TSEEEEEECE--EBSCSSTT---CE
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHH-cCCCeEE---ecCCCCchHHHHHc---CCCEEEEcCC--cCCCCChh---hc
Confidence 11111 001 1 11122222211110 0000000 12347899999963 9999987533 23589975 66
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 004166 308 LLPGSVQARGDNLFNVLKA 326 (770)
Q Consensus 308 id~~~lq~~g~~~l~l~~~ 326 (770)
++.+.+++..+.+.++++.
T Consensus 313 v~~~dl~~~~~ll~~~~~~ 331 (332)
T 2wyr_A 313 LHLNDLEKLVKLIEALAFE 331 (332)
T ss_dssp EEHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHh
Confidence 7788999999988888765
No 21
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.49 E-value=2.7e-13 Score=148.09 Aligned_cols=221 Identities=15% Similarity=0.131 Sum_probs=139.6
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceE
Q 004166 52 SEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNI 131 (770)
Q Consensus 52 s~era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NV 131 (770)
+.+++.+.+++|. ++.+ + |..++.+++|+.++++++| ++++++ +..|+
T Consensus 4 ~~~~~~~~l~~lv-~i~s-~--s~~e~~~~~~l~~~l~~~g------~~~~~d----------------------~~gnl 51 (349)
T 2gre_A 4 HTKETMELIKELV-SIPS-P--SGNTAKIINFIENYVSEWN------VETKRN----------------------NKGAL 51 (349)
T ss_dssp HHHHHHHHHHHHH-TSCC-B--TTCCHHHHHHHHHHTTTSS------SEEEEC----------------------SSSCE
T ss_pred cHHHHHHHHHHHH-hCCC-C--CccHHHHHHHHHHHHHHhC------CEEEEe----------------------cCCcE
Confidence 4578899999999 5543 3 3344578999999999988 344432 12489
Q ss_pred EEEEeCCCCCCCCCeEEEeecCCCCC----------------C-------------------C-----------------
Q 004166 132 VMRISSTDSQDTDPSVLMNGHFDGPL----------------S-------------------S----------------- 159 (770)
Q Consensus 132 i~~i~g~~~~~~~~~Vll~aH~Dsv~----------------~-------------------s----------------- 159 (770)
+++++|++ +.+.|++++|+|+|+ . +
T Consensus 52 ~a~~~g~~---~~~~ill~~H~Dtv~~~v~~i~~~G~l~~~~~Gg~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h~~ 128 (349)
T 2gre_A 52 ILTVKGKN---DAQHRLLTAHVDTLGAMVKEIKPDGRLSLSMIGGFRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVY 128 (349)
T ss_dssp EEEECCSE---EEEEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGTTTCEEEEECTTSCEEEEEEECC-------
T ss_pred EEEecCCC---CCceEEEEecccccceeEEEECCCCeEEEEecCCCccccccCcEEEEEcCCCCEEEEEEeCCCCCcccc
Confidence 99998742 236799999999982 0 0
Q ss_pred ------------------------------------------------CC-----CCCChhHHHHHHHHHHHHHhcCCCC
Q 004166 160 ------------------------------------------------PG-----AGDCGSCVASMLELARLTIDSGWIP 186 (770)
Q Consensus 160 ------------------------------------------------~G-----A~D~~sgva~~LE~ar~l~~~~~~~ 186 (770)
.| +.||++|++++|++++.+++.+.++
T Consensus 129 ~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~~gd~v~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~~~~ 208 (349)
T 2gre_A 129 KDAGEAKRDEKNIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENVTL 208 (349)
T ss_dssp ------------CEEEESSCCCSHHHHHHTTCCTTCEEEECCCCEECTTSEEEESCCTTHHHHHHHHHHHHHHHHHTCCC
T ss_pred chhccCCCCHHHceEEeccCCCCHHHHHHcCCCCCCEEEEccccEEccCCeEEEeeccchHHHHHHHHHHHHHHhccCCC
Confidence 01 6999999999999999999877778
Q ss_pred CCCEEEEEeCcccCCccChHHHHhhccccCceeEEEEeccCCCCC-C-----ce--EEe--eCCC-CchhhHhhhhc---
Q 004166 187 PRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGG-L-----DL--VCQ--SGPS-SWPSSVYAQSA--- 252 (770)
Q Consensus 187 ~~~I~flf~~~EE~gl~GS~~fi~~~~~~~~i~a~INlD~~G~gg-~-----~~--lfq--~gp~-~~~~~~y~~~~--- 252 (770)
+++|+|+|+++||.|+.|++.+ ..+...+|++|+.+.++ + .. ... .++. +.+.+...+.+
T Consensus 209 ~~~i~~~~~~~EE~G~~g~~~~------~~~~~~~i~~D~~~~~~~p~~~~~g~~i~~~~~~~~~~~~l~~~l~~~a~~~ 282 (349)
T 2gre_A 209 PYTTHFLISNNEEIGYGGNSNI------PEETVEYLAVDMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTN 282 (349)
T ss_dssp SEEEEEEEESCC----CCCCCC------CTTEEEEEEECCCCCSCC--CCTTSEEEEEEETTEECCHHHHHHHHHHHHHH
T ss_pred CceEEEEEECcccCCchhhccc------ccCCCEEEEEecccccCCCCCCCCceEEEEccCCCCCCHHHHHHHHHHHHHc
Confidence 8999999999999999999865 34678999999987653 1 11 111 1111 22222222211
Q ss_pred cCccccccccccCCCCCCCCchHHHhccCCCCcEEEEEEecCCccCcCcCcccCCCCHHHHHHHHHHHHHHHH
Q 004166 253 IYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLK 325 (770)
Q Consensus 253 ~~p~~~~l~~e~f~~ips~tD~~~F~~~~~gIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~ 325 (770)
..|+-. +.. ...+||+.+|.....|+|.+++.. .. ...|| .|+++.+.+....+.+.+++.
T Consensus 283 gi~~q~----~~~--~ggGsDa~~~~~~~~GiPt~~lg~-~~-~~~Hs----~E~~~~~dl~~~~~ll~~~l~ 343 (349)
T 2gre_A 283 HIEYKV----DIY--PYYGSDASAAIRAGFDVKHALIGA-GI-DSSHA----FERTHESSIAHTEALVYAYVM 343 (349)
T ss_dssp TCCEEE----EEC--SCC--------CCSSSCEEEEEEE-CC-BSTTS----SEEEEHHHHHHHHHHHHHHHH
T ss_pred CCCcEE----ecc--CCCCccHHHHHHhCCCCcEEEecc-Cc-ccccc----ceeccHHHHHHHHHHHHHHHh
Confidence 122111 111 246799988842236999997753 32 34887 577778899888888777764
No 22
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=99.42 E-value=1.4e-12 Score=145.00 Aligned_cols=129 Identities=20% Similarity=0.212 Sum_probs=107.6
Q ss_pred cHHHHHHHHHHHHHhcCC-------CCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceecccccccc
Q 004166 52 SEARAIQHVRVLADEIGD-------RQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLG 124 (770)
Q Consensus 52 s~era~~~l~~L~~~ig~-------R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~ 124 (770)
+.+|+++.+++|+ +++. |...|.++.++++||.++++++| ++++.+
T Consensus 3 ~~~~~~~~l~~l~-~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g------~~~~~d-------------------- 55 (408)
T 3n5f_A 3 QGERLWQRLMELG-EVGKQPSGGVTRLSFTAEERRAKDLVASYMREAG------LFVYED-------------------- 55 (408)
T ss_dssp CHHHHHHHHHHHH-TTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHT------CEEEEC--------------------
T ss_pred CHHHHHHHHHHHH-ccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCC------CEEEEc--------------------
Confidence 5789999999999 6665 44457788899999999999998 344331
Q ss_pred ccccceEEEEEeCCCCCCCCCeEEEeecCCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccC----
Q 004166 125 YRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEEL---- 200 (770)
Q Consensus 125 y~~~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE~---- 200 (770)
...||+++++|+++ +.+.|++++|+|+|+. .|+.|+++|++++|++++.|++.+.+++++|.|+|+.+||.
T Consensus 56 --~~gnv~a~~~g~~~--~~~~i~l~aH~D~v~~-~g~~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~ 130 (408)
T 3n5f_A 56 --AAGNLIGRKEGTNP--DATVVLVGSHLDSVYN-GGCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFR 130 (408)
T ss_dssp --TTCCEEEEECCSST--TSCEEEEEEESCCCTT-BCSSTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTT
T ss_pred --CCCCEEEEecCCCC--CCCEEEEEecCCCCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccC
Confidence 12499999998642 2578999999999995 57889999999999999999988878999999999999995
Q ss_pred -CccChHHHHhhc
Q 004166 201 -FMLGAHGFMKAH 212 (770)
Q Consensus 201 -gl~GS~~fi~~~ 212 (770)
|+.||+.++.+.
T Consensus 131 ~g~~Gs~~~~~~~ 143 (408)
T 3n5f_A 131 FGMIGSRAMAGTL 143 (408)
T ss_dssp CCCHHHHHHHTCC
T ss_pred CCCcCHHHHHcCC
Confidence 788999998643
No 23
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.42 E-value=1.7e-12 Score=143.68 Aligned_cols=146 Identities=21% Similarity=0.310 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCh-hHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceE
Q 004166 53 EARAIQHVRVLADEIGDRQEGRP-GLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNI 131 (770)
Q Consensus 53 ~era~~~l~~L~~~ig~R~~gS~-~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NV 131 (770)
.+++.+.+++|. +|.+ +++.+ +++++++||.++++++| ++++.+..... ....|+
T Consensus 18 ~~~~~~~l~~lv-~i~s-~s~~~~~~~~~~~~l~~~l~~~G------~~~~~~~~~~~----------------~~~~~v 73 (393)
T 1cg2_A 18 QPAVIKTLEKLV-NIET-GTGDAEGIAAAGNFLEAELKNLG------FTVTRSKSAGL----------------VVGDNI 73 (393)
T ss_dssp HHHHHHHHHHHH-TSCC-BTTCHHHHHHHHHHHHHHHHHTT------CEEEEEECSTT----------------CCSEEE
T ss_pred HHHHHHHHHHHh-cCCC-CCCCHHHHHHHHHHHHHHHHHcC------CeEEEEecCcC----------------CCCCeE
Confidence 467888899998 5544 44544 34589999999999998 45544321100 012599
Q ss_pred EEEEeCCCCCCCCCeEEEeecCCCCCC-----------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEE
Q 004166 132 VMRISSTDSQDTDPSVLMNGHFDGPLS-----------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLF 194 (770)
Q Consensus 132 i~~i~g~~~~~~~~~Vll~aH~Dsv~~-----------------s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf 194 (770)
+++++|++ ++.|++.+|+|+||. ++|+.|+++|++++|++++.|++.+.+++++|+|+|
T Consensus 74 ~a~~~g~~----~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~ 149 (393)
T 1cg2_A 74 VGKIKGRG----GKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLF 149 (393)
T ss_dssp EEEEECSS----CCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEE
T ss_pred EEEECCCC----CceEEEEEecCcCCCCCccccCCeeeeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEE
Confidence 99998743 267999999999974 479999999999999999999988777777999999
Q ss_pred eCcccCCccChHHHHhhccccCceeEEEEeccCC
Q 004166 195 NGAEELFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (770)
Q Consensus 195 ~~~EE~gl~GS~~fi~~~~~~~~i~a~INlD~~G 228 (770)
+.+||.|..|++.++++.. .++++++++|..+
T Consensus 150 ~~~EE~g~~G~~~~~~~~~--~~~d~~i~~e~~~ 181 (393)
T 1cg2_A 150 NTDEEKGSFGSRDLIQEEA--KLADYVLSFEPTS 181 (393)
T ss_dssp ESCGGGTTTTTHHHHHHHH--HHCSEEEECCCEE
T ss_pred EcccccCCccHHHHHHHHh--hcCCEEEEeCCCC
Confidence 9999999999999998643 3577889998654
No 24
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.39 E-value=6.7e-12 Score=142.32 Aligned_cols=156 Identities=16% Similarity=0.158 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCh----hHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceecccccccccccc
Q 004166 53 EARAIQHVRVLADEIGDRQEGRP----GLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNH 128 (770)
Q Consensus 53 ~era~~~l~~L~~~ig~R~~gS~----~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~ 128 (770)
.+++.+.+++|. ++. .+.+.+ ++.++++||.++++++| ++++++.... ... .... .....
T Consensus 19 ~~~~~~~l~~l~-~~p-s~s~~e~~~~~~~~~~~~l~~~l~~~G------~~~~~~~~~~---~~~---~~~~--~~~~~ 82 (479)
T 2zog_A 19 QDRYVKKLAEWV-AIQ-SVSAWPEKRGEIRRMMEVAAADVQRLG------GSVELVDIGK---QKL---PDGS--EIPLP 82 (479)
T ss_dssp HHHHHHHHHHHH-HSC-CBTTCGGGHHHHHHHHHHHHHHHHHTT------CEEEEECCCE---EEC---TTSC--EEECC
T ss_pred HHHHHHHHHHHh-cCC-CccCCcccchHHHHHHHHHHHHHHHcC------CeEEEeeccc---ccc---CCCc--ccCCC
Confidence 467888999998 543 344433 33589999999999998 4455432100 000 0000 00012
Q ss_pred ceEEEEEeCCCCCCCCCeEEEeecCCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCC
Q 004166 129 TNIVMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPP 187 (770)
Q Consensus 129 ~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~---------------------s~GA~D~~sgva~~LE~ar~l~~~~~~~~ 187 (770)
.||+++++|.. +.+.|++.+|+|+||. ++|+.||++|+|++|++++.|++.+.+++
T Consensus 83 ~~v~a~~~~~~---~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~ 159 (479)
T 2zog_A 83 PILLGKLGSDP---QKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIP 159 (479)
T ss_dssp CEEEEEECCCT---TSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCS
T ss_pred CEEEEEecCCC---CCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCCCC
Confidence 69999997632 3478999999999974 57889999999999999999998887888
Q ss_pred CCEEEEEeCcccCCccChHHHHhhcc--ccCceeEEEEeccC
Q 004166 188 RPIIFLFNGAEELFMLGAHGFMKAHK--WRDSVGAVINVEAS 227 (770)
Q Consensus 188 ~~I~flf~~~EE~gl~GS~~fi~~~~--~~~~i~a~INlD~~ 227 (770)
++|+|+|+.+||.|..|++.+++++. +.+++++++++|..
T Consensus 160 ~~v~~~~~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~~ 201 (479)
T 2zog_A 160 VNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNY 201 (479)
T ss_dssp SEEEEEEESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCCB
T ss_pred CcEEEEEecccccCCccHHHHHHhhhhhhcccCCEEEEeCCC
Confidence 99999999999999999999998763 33467889999864
No 25
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.37 E-value=1.2e-12 Score=142.51 Aligned_cols=149 Identities=16% Similarity=0.129 Sum_probs=83.5
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccChHHHHhhccccCceeEEEEeccCCCC---CCce----
Q 004166 162 AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTG---GLDL---- 234 (770)
Q Consensus 162 A~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE~gl~GS~~fi~~~~~~~~i~a~INlD~~G~g---g~~~---- 234 (770)
+.||++|++++|+++|.++ +++++|+|+|+++||.|..|++.+++.. +...+|++|+.+.+ |+..
T Consensus 165 a~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~~G~~~~~~~~----~~~~~i~~d~~~~~~~~G~~~h~~~ 236 (340)
T 2fvg_A 165 AFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGLRGSAVVVEQL----KPTCAIVVETTTAGDNPELEERKWA 236 (340)
T ss_dssp CHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC-----CHHHHHHH----CCSEEEEEEEEEECSCSTTCCSSSS
T ss_pred cCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccchhhhHHHhhcc----CCCEEEEEecccCCCCCCCccccCC
Confidence 6899999999999999886 4778999999999999999999988732 34678999976432 2110
Q ss_pred -------EEe---eCC--CCchhhHhhhhc---cCccccccccccCCCCCCCCchHHHhccCCCCcEEEEEEecCCccCc
Q 004166 235 -------VCQ---SGP--SSWPSSVYAQSA---IYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYH 299 (770)
Q Consensus 235 -------lfq---~gp--~~~~~~~y~~~~---~~p~~~~l~~e~f~~ips~tD~~~F~~~~~gIPgld~a~~~~~~~YH 299 (770)
+.. .+. ++.+.+...+.+ ..|+ + .....+.+||...|.....|+|.+.+.-.. . .+|
T Consensus 237 ~~~G~g~~i~~~~~~~~~~~~l~~~l~~~a~~~gi~~-----~-~~~~~~ggtDa~~~~~~~~GiP~v~~g~~~-~-~~H 308 (340)
T 2fvg_A 237 THLGDGPAITFYHRGYVIPKEIFQTIVDTAKNNDIPF-----Q-MKRRTAGGTDAGRYARTAYGVPAGVISTPA-R-YIH 308 (340)
T ss_dssp CCTTSCCEECSCCSSSCCCHHHHHHHHHHHHHTTCCC-----E-ECCCC-------------CCSCEEEEEEEE-E-ESS
T ss_pred cccCCCcEEEEeCCCCCCCHHHHHHHHHHHHHcCCCe-----E-EEecCCCCccHHHHHhhCCCCcEEEecccc-c-ccC
Confidence 000 000 000111111110 0110 0 000234689999986312699999775432 3 399
Q ss_pred CcCcccCCCCHHHHHHHHHHHHHHHHHHhc
Q 004166 300 TSHDTVDRLLPGSVQARGDNLFNVLKAFSN 329 (770)
Q Consensus 300 T~~Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (770)
|+. |+++.+.+++..+.+.++++.+..
T Consensus 309 s~~---E~v~~~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 309 SPN---SIIDLNDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp TTC---EEEEHHHHHHHHHHHHHHHHHCHH
T ss_pred Chh---hcccHHHHHHHHHHHHHHHHhccc
Confidence 986 457789999999999999888754
No 26
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.35 E-value=6.4e-12 Score=142.82 Aligned_cols=144 Identities=17% Similarity=0.239 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHhcCCCCCCC-hhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceEEE
Q 004166 55 RAIQHVRVLADEIGDRQEGR-PGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (770)
Q Consensus 55 ra~~~l~~L~~~ig~R~~gS-~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi~ 133 (770)
++.+.+++|. ++.. +.+. +++.++++||.++++++| ++++++. . ....||++
T Consensus 45 ~~~~~l~~l~-~ips-~s~~e~~~~~~~~~l~~~l~~~G------~~~~~~~--~-----------------~~~~~v~a 97 (481)
T 2pok_A 45 HYFEVLRTLI-SKKS-VFAQQVGLKEVANYLGEIFKRVG------AEVEIDE--S-----------------YTAPFVMA 97 (481)
T ss_dssp HHHHHHHHHH-HSCC-CGGGCTTHHHHHHHHHHHHHHTT------CEEEEEC--S-----------------SSSCEEEE
T ss_pred HHHHHHHHHH-cCCC-cCCCCHHHHHHHHHHHHHHHHcC------CEEEEec--C-----------------CCCcEEEE
Confidence 7788888888 5543 3332 344689999999999998 4454432 1 12369999
Q ss_pred EEeCCCCCCCCCeEEEeecCCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEE
Q 004166 134 RISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (770)
Q Consensus 134 ~i~g~~~~~~~~~Vll~aH~Dsv~~---------------------s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~f 192 (770)
+++|++ ++.+.|++.+|+|+||. ++|+.||++|+|++|++++.|++.+.+++++|+|
T Consensus 98 ~~~g~~--~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~ 175 (481)
T 2pok_A 98 HFKSSR--PDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISF 175 (481)
T ss_dssp EECCSS--TTCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCSSEEEE
T ss_pred EecCCC--CCCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCCCCEEE
Confidence 998752 23578999999999873 5789999999999999999999875578899999
Q ss_pred EEeCcccCCccChHHHHhhccc-cCceeEEEEeccC
Q 004166 193 LFNGAEELFMLGAHGFMKAHKW-RDSVGAVINVEAS 227 (770)
Q Consensus 193 lf~~~EE~gl~GS~~fi~~~~~-~~~i~a~INlD~~ 227 (770)
+|+.+||.|..|++.+++++.. .++++++++.|..
T Consensus 176 ~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~i~~~~~ 211 (481)
T 2pok_A 176 IMEGAEESASTDLDKYLEKHADKLRGADLLVWEQGT 211 (481)
T ss_dssp EEESCGGGTTTTHHHHHHHHHHHHTTCSEEECSCCB
T ss_pred EEecccccCchhHHHHHHHhHhhccCCCEEEECCCC
Confidence 9999999999999999886531 1237788888764
No 27
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.32 E-value=1.8e-11 Score=133.87 Aligned_cols=135 Identities=21% Similarity=0.245 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceEE
Q 004166 53 EARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIV 132 (770)
Q Consensus 53 ~era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi 132 (770)
.++..+.+++|. ++.. -|.++.++++||.++++++| ++++.+ ..|++
T Consensus 10 ~~~~~~~~~~l~-~~ps---~s~~e~~~~~~l~~~l~~~g------~~~~~~-----------------------~~nv~ 56 (356)
T 3ct9_A 10 TAEAVSLLKSLI-SIPS---ISREETQAADFLQNYIEAEG------MQTGRK-----------------------GNNVW 56 (356)
T ss_dssp HHHHHHHHHHHH-TSCC---BTTCCHHHHHHHHHHHHHTT------CCEEEE-----------------------TTEEE
T ss_pred HHHHHHHHHHHh-cCCC---CCCChHHHHHHHHHHHHHCC------CeEEEE-----------------------eeeEE
Confidence 356778888887 4332 33445688999999999998 344332 25999
Q ss_pred EEEeCCCCCCCCCeEEEeecCCCCCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEE
Q 004166 133 MRISSTDSQDTDPSVLMNGHFDGPLS-------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFL 193 (770)
Q Consensus 133 ~~i~g~~~~~~~~~Vll~aH~Dsv~~-------------------s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~fl 193 (770)
++++|++ .+.+.|++.+|+|+||. ++|+.|+++|++++|++++.|++.+ ++++|+|+
T Consensus 57 a~~~g~~--~~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~ 132 (356)
T 3ct9_A 57 CLSPMFD--LKKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLIYL 132 (356)
T ss_dssp EECSSCC--TTSCEEEEEEECCBCCCC-------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEEEE
T ss_pred EEEecCC--CCCCeEEEEccccccCCCCCCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEEEE
Confidence 9998732 23478999999999974 5688899999999999999999876 78999999
Q ss_pred EeCcccC-CccChHHHHhhccccCceeEEEEeccC
Q 004166 194 FNGAEEL-FMLGAHGFMKAHKWRDSVGAVINVEAS 227 (770)
Q Consensus 194 f~~~EE~-gl~GS~~fi~~~~~~~~i~a~INlD~~ 227 (770)
|+.+||. |..|++.++++.+ ++++.+++|..
T Consensus 133 ~~~~EE~~g~~G~~~~~~~~~---~~d~~i~~ep~ 164 (356)
T 3ct9_A 133 ASCEEEVSGKEGIESVLPGLP---PVSFAIVGEPT 164 (356)
T ss_dssp EECCGGGTCTTTHHHHGGGSC---CCSEEEECCSB
T ss_pred EEeCcccCCccCHHHHHhhCC---CCCEEEEcCCC
Confidence 9999999 8999999998652 46688888865
No 28
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=99.30 E-value=2.2e-11 Score=136.16 Aligned_cols=157 Identities=14% Similarity=0.124 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccc-cccc-cccccceE
Q 004166 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGH-SISL-GYRNHTNI 131 (770)
Q Consensus 54 era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~-~~~~-~y~~~~NV 131 (770)
+++.+.+++|. ++ +..|.++.++++||.++|+++| ++++....... ....+-+. +... ......||
T Consensus 26 ~~~~~~l~~l~-~~---ps~s~~e~~~~~~l~~~l~~~G------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v 93 (433)
T 3pfo_A 26 NDQVAFLQRMV-QF---RSVRGEEAPQQEWLAQQFADRG------YKVDTFSLADV--DIASHPKAAPMDTIDPAGSMQV 93 (433)
T ss_dssp HHHHHHHHHHH-TS---CCBTTCCHHHHHHHHHHHHHTT------CEEEEEETGGG--TGGGSTTCCCCTTCCGGGCEEE
T ss_pred HHHHHHHHHHh-cC---CCCCCCHHHHHHHHHHHHHHCC------CceEEEecchh--hhhccccccccccccCCCCcEE
Confidence 55677777777 43 2345556689999999999998 44443321000 00000000 0000 12346899
Q ss_pred EEEEeCCCCCCCCCeEEEeecCCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCE
Q 004166 132 VMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPI 190 (770)
Q Consensus 132 i~~i~g~~~~~~~~~Vll~aH~Dsv~~---------------------s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I 190 (770)
+++++|.+ +.+.|++.+|+|+||. ++|+.|+++|+|++|++++.|++.+.+++++|
T Consensus 94 ia~~~g~~---~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~~v 170 (433)
T 3pfo_A 94 VATADSDG---KGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDARV 170 (433)
T ss_dssp EEEECCCC---CSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESSCE
T ss_pred EEEEecCC---CCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCccE
Confidence 99998742 3467999999999984 35999999999999999999998877788999
Q ss_pred EEEEeCcccCCccChHHHHhhccccCceeEEEEeccCC
Q 004166 191 IFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (770)
Q Consensus 191 ~flf~~~EE~gl~GS~~fi~~~~~~~~i~a~INlD~~G 228 (770)
.|+|..+||.|..|++.++++. .+++++|+.|..+
T Consensus 171 ~~~~~~~EE~g~~G~~~~~~~~---~~~d~~i~~ep~~ 205 (433)
T 3pfo_A 171 HVQTVTEEESTGNGALSTLMRG---YRADACLIPEPTG 205 (433)
T ss_dssp EEEEESCTTTTCHHHHHHHHTT---CCCSEEEECCCCS
T ss_pred EEEEEecCccCChhHHHHHhcC---CCCCEEEEeCCCC
Confidence 9999999999889999988743 2578888888553
No 29
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.30 E-value=9.6e-12 Score=139.60 Aligned_cols=139 Identities=14% Similarity=0.223 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHhcCCCCCC--------ChhHHHHHHHHHHHHHhcccccCCcee-EEEEEeeecCcccceecccccccc
Q 004166 54 ARAIQHVRVLADEIGDRQEG--------RPGLREAAVYIKTQLEGIKERAGPKFR-IEIEENVVNGSFNMIFLGHSISLG 124 (770)
Q Consensus 54 era~~~l~~L~~~ig~R~~g--------S~~~e~a~~yl~~~l~~ig~~~~~~~~-vev~~~~~~g~~~~~~~~~~~~~~ 124 (770)
+|+.+.+++|. +|.+ +.+ ++++.++++||.++++++| ++ ++++
T Consensus 27 ~~~~~~l~~lv-~i~s-~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G------~~~~~~d-------------------- 78 (434)
T 3ife_A 27 EELIERFTRYV-KIDT-QSNEDSHTVPTTPGQIEFGKLLVEELKEVG------LTEVTMD-------------------- 78 (434)
T ss_dssp HHHHHHHHHHH-TSCC-BCCTTCCSSSSSHHHHHHHHHHHHHHHHHT------CEEEEEC--------------------
T ss_pred HHHHHHHHhhE-Eeec-cCCCccCCCCCCHHHHHHHHHHHHHHHHcC------CceEEEC--------------------
Confidence 57888889898 5654 333 3466689999999999998 32 4432
Q ss_pred ccccceEEEEEeCCCCCCCCCeEEEeecCCCCCCC---------------------------------------------
Q 004166 125 YRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS--------------------------------------------- 159 (770)
Q Consensus 125 y~~~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~s--------------------------------------------- 159 (770)
+..||+++++|+++ ++.+.|++++|+|+||..
T Consensus 79 --~~~nv~a~~~g~~~-~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i 155 (434)
T 3ife_A 79 --DNGYVMATLPANTD-KDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTII 155 (434)
T ss_dssp --TTSCEEEEECCBSS-SCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEE
T ss_pred --CCcEEEEEeCCCCC-CCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEE
Confidence 13599999998642 234789999999999741
Q ss_pred --CC----CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccChHHHHhhccccCceeEEEEeccC
Q 004166 160 --PG----AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEAS 227 (770)
Q Consensus 160 --~G----A~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE~gl~GS~~fi~~~~~~~~i~a~INlD~~ 227 (770)
+| +.||++|+|++|++++.|++.+..++++|+|+|+.+||.| .|++.+..+. . ++++++++|..
T Consensus 156 ~grG~t~~~~D~K~gva~~l~a~~~L~~~~~~~~~~i~~if~~~EE~g-~Ga~~~~~~~-~--~~d~~~~~d~~ 225 (434)
T 3ife_A 156 TTDGTTLLGADDKAGLTEIMVAMNYLIHNPQIKHGKIRVAFTPDEEIG-RGPAHFDVEA-F--GASFAYMMDGG 225 (434)
T ss_dssp ECCSSSCCCHHHHHHHHHHHHHHHHHHTCTTSCBCCEEEEEESCGGGT-CTGGGCCHHH-H--CCSEEEECCCC
T ss_pred ECCCccchhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEECCcccC-hHHHHhhhhh-c--CCCEEEEecCC
Confidence 12 4899999999999999999887788999999999999999 8988764321 1 57888888853
No 30
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.28 E-value=5.8e-11 Score=135.18 Aligned_cols=152 Identities=17% Similarity=0.160 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHHhcCCCC--CCCh----hHHHHHHHHHHHHHhcccccCCceeEEEEEeee----cCcccceecccccc
Q 004166 53 EARAIQHVRVLADEIGDRQ--EGRP----GLREAAVYIKTQLEGIKERAGPKFRIEIEENVV----NGSFNMIFLGHSIS 122 (770)
Q Consensus 53 ~era~~~l~~L~~~ig~R~--~gS~----~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~----~g~~~~~~~~~~~~ 122 (770)
.++..+.+++|. ++.. + .+.+ ++.++++||.++|+++| ++++.+.... +|.
T Consensus 24 ~~~~i~~l~~lv-~ips-~~~s~~~~~~~~~~~~~~~l~~~l~~~G------~~~~~~~~~~~~~~~g~----------- 84 (485)
T 3dlj_A 24 QDEFVQTLKEWV-AIES-DSVQPVPRFRQELFRMMAVAADTLQRLG------ARVASVDMGPQQLPDGQ----------- 84 (485)
T ss_dssp HHHHHHHHHHHH-TSCC-BSSSCCHHHHHHHHHHHHHHHHHHHHTT------CEEEEECCCEEEC--CC-----------
T ss_pred HHHHHHHHHHHh-cCCC-ccCCCCccccHHHHHHHHHHHHHHHHcC------CeEEEEecCcccccCCC-----------
Confidence 356777888887 4432 3 3332 24589999999999998 4444432100 110
Q ss_pred ccccccceEEEEEeCCCCCCCCCeEEEeecCCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHh
Q 004166 123 LGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTID 181 (770)
Q Consensus 123 ~~y~~~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~---------------------s~GA~D~~sgva~~LE~ar~l~~ 181 (770)
.+....||++++++.. +.+.|++.+|+|+||. ++|+.||++|++++|++++.|++
T Consensus 85 -~~~~~~~v~a~~~~~~---~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~ 160 (485)
T 3dlj_A 85 -SLPIPPVILAELGSDP---TKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRA 160 (485)
T ss_dssp -EEECCCEEEEEECCCT---TSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHH
T ss_pred -ccCCCcEEEEEECCCC---CCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHH
Confidence 0001358999996532 3578999999999974 58999999999999999999999
Q ss_pred cCCCCCCCEEEEEeCcccCCccChHHHHhhccc--cCceeEEEEeccC
Q 004166 182 SGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKW--RDSVGAVINVEAS 227 (770)
Q Consensus 182 ~~~~~~~~I~flf~~~EE~gl~GS~~fi~~~~~--~~~i~a~INlD~~ 227 (770)
.+.+++.+|+|+|..+||.|..|++.+++++.. .+++++++++|..
T Consensus 161 ~~~~~~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~ 208 (485)
T 3dlj_A 161 LEQDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNL 208 (485)
T ss_dssp TTCCCSSEEEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCB
T ss_pred hCCCCCccEEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCC
Confidence 887889999999999999999999999987642 3578999999964
No 31
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=99.27 E-value=2.9e-11 Score=132.53 Aligned_cols=150 Identities=15% Similarity=0.232 Sum_probs=112.2
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccc
Q 004166 50 RFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHT 129 (770)
Q Consensus 50 ~Fs~era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~ 129 (770)
..+.++..+.+++|. ++.. .|.++.++++||.++++++| ++++.+.. +. .......
T Consensus 2 ~~~~~~~~~~l~~l~-~~ps---~s~~e~~~~~~l~~~l~~~G------~~v~~~~~---~~-----------~~~~~~~ 57 (373)
T 3gb0_A 2 MINQERLVNEFMELV-QVDS---ETKFEAEICKVLTKKFTDLG------VEVFEDDT---MA-----------VTGHGAG 57 (373)
T ss_dssp CSCHHHHHHHHHHHH-TSCC---BTTCCHHHHHHHHHHHHHTT------CEEEECSC---HH-----------HHCCSSC
T ss_pred CCCHHHHHHHHHHHh-cccC---CCccHHHHHHHHHHHHHHCC------CEEEEecc---cc-----------ccCCCce
Confidence 357899999999999 5433 45566799999999999998 44443211 00 0011246
Q ss_pred eEEEEEeCCCCCCCCCeEEEeecCCCCCC--------------CCCC----CCChhHHHHHHHHHHHHHhcCCCCCCCEE
Q 004166 130 NIVMRISSTDSQDTDPSVLMNGHFDGPLS--------------SPGA----GDCGSCVASMLELARLTIDSGWIPPRPII 191 (770)
Q Consensus 130 NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~--------------s~GA----~D~~sgva~~LE~ar~l~~~~~~~~~~I~ 191 (770)
|++++++|+++ +.+.|++.+|+|+||. ++|+ .||+.|++++|++++.|++.+. ++++|.
T Consensus 58 nv~a~~~g~~~--~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~ 134 (373)
T 3gb0_A 58 NLICTLPATKD--GVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIE 134 (373)
T ss_dssp CEEEEECCSST--TCCCEEEEEECCBCSSCSSCCCEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCCEE
T ss_pred eEEEEecCCCC--CCCEEEEEEECcccCCCCCcCcEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEE
Confidence 99999988631 3467999999999973 4566 5999999999999999998764 679999
Q ss_pred EEEeCcccCCccChHHHHhhccccCceeEEEEeccCCC
Q 004166 192 FLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGT 229 (770)
Q Consensus 192 flf~~~EE~gl~GS~~fi~~~~~~~~i~a~INlD~~G~ 229 (770)
|+|+.+||.|..|++.+..+. .+....+++|..+.
T Consensus 135 ~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~~~~~~ 169 (373)
T 3gb0_A 135 FIITVGEESGLVGAKALDRER---ITAKYGYALDSDGK 169 (373)
T ss_dssp EEEESCGGGTSHHHHHSCGGG---CCCSEEEEEEECSC
T ss_pred EEEEeccccCchhhhhhCHHh---cCCCEEEEEcCCCC
Confidence 999999999999999885432 24567777776543
No 32
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=99.24 E-value=3.4e-11 Score=136.74 Aligned_cols=128 Identities=14% Similarity=0.151 Sum_probs=104.3
Q ss_pred cccHHHHHHHHHHH-HHhcCCC--------------CCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccc
Q 004166 50 RFSEARAIQHVRVL-ADEIGDR--------------QEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNM 114 (770)
Q Consensus 50 ~Fs~era~~~l~~L-~~~ig~R--------------~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~ 114 (770)
+.+.+++.+.+++| . +|+.. ...|.++.++++||.++++++| ++++++
T Consensus 28 ~~~~~~~~~~l~~L~v-~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G------~~v~~d---------- 90 (474)
T 2v8h_A 28 SIASGRLNQTILETGS-QFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLG------CKVKVD---------- 90 (474)
T ss_dssp CCCTTHHHHHHHHHHH-HTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTT------CEEEEB----------
T ss_pred cCCHHHHHHHHHHHhh-hcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcC------CEEEEe----------
Confidence 46778999999999 8 56532 2336667799999999999998 444431
Q ss_pred eeccccccccccccceEEEEEeCCCCCCCCCeEEEeecCCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEE
Q 004166 115 IFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLF 194 (770)
Q Consensus 115 ~~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf 194 (770)
+..||+++++|+++ .+.|++.+|+|+||.+ |..|++.|++++|++++.|++.+.+++++|+|+|
T Consensus 91 ------------~~gnvia~~~g~~~---~~~i~l~~H~DtVp~~-g~~D~k~gvaa~L~a~~~L~~~~~~~~~~v~lif 154 (474)
T 2v8h_A 91 ------------KIGNMFAVYPGKNG---GKPTATGSHLDTQPEA-GKYDGILGVLAGLEVLRTFKDNNYVPNYDVCVVV 154 (474)
T ss_dssp ------------TTCCEEEEECCSSC---CSCEEEEECCCCCSSB-CSSTTHHHHHHHHHHHHHHHHHTCCCSSCEEEEE
T ss_pred ------------cCceEEEEECCCCC---CCeEEEEEecccCCCC-CCcCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEE
Confidence 12489999987542 3479999999999963 6789999999999999999988888899999999
Q ss_pred eCcccC-----CccChHHHHh
Q 004166 195 NGAEEL-----FMLGAHGFMK 210 (770)
Q Consensus 195 ~~~EE~-----gl~GS~~fi~ 210 (770)
+.+||. |+.||+.+..
T Consensus 155 ~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 155 WFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp CTTCSCSSSSCTTHHHHHHTT
T ss_pred ECCccCCCCCCCcccHHHHHh
Confidence 999998 7889999875
No 33
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.24 E-value=2.5e-11 Score=133.05 Aligned_cols=139 Identities=18% Similarity=0.133 Sum_probs=104.9
Q ss_pred cHHHHHHHHHHHHHhcCCCCCCChhHH-HHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccce
Q 004166 52 SEARAIQHVRVLADEIGDRQEGRPGLR-EAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTN 130 (770)
Q Consensus 52 s~era~~~l~~L~~~ig~R~~gS~~~e-~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~N 130 (770)
+.+++.+.+++|. ++.. +...+++| ++++||.++++++|. +++.+ ..|
T Consensus 4 ~~~~~~~~l~~l~-~ips-~s~~~~~e~~~~~~l~~~l~~~G~------~~~~~-----------------------~~~ 52 (364)
T 2rb7_A 4 SMQHIVELTSDLI-RFPS-MHSRPEQISRCAGFIMDWCAQNGI------HAERM-----------------------DHD 52 (364)
T ss_dssp HHHHHHHHHHHHH-TSCC-CTTCHHHHHHHHHHHHHHHHHTTC------CCEEE-----------------------EET
T ss_pred cHHHHHHHHHHHH-cCCC-CCCCcchHHHHHHHHHHHHHHcCC------eEEEe-----------------------cCC
Confidence 4567888899998 4432 23233444 899999999999983 33322 136
Q ss_pred EEEEEeCCCCCCCCCeEEEeecCCCCCC---------------CCCCCCChhHHHHHHHHHHHHHhcCCCC---CCC--E
Q 004166 131 IVMRISSTDSQDTDPSVLMNGHFDGPLS---------------SPGAGDCGSCVASMLELARLTIDSGWIP---PRP--I 190 (770)
Q Consensus 131 Vi~~i~g~~~~~~~~~Vll~aH~Dsv~~---------------s~GA~D~~sgva~~LE~ar~l~~~~~~~---~~~--I 190 (770)
++++++|+.+ ++.+.|++.+|+|+||. ++|+.|+++|++++|++++.|++.+.++ +++ |
T Consensus 53 ~~~~~~~~~~-~~~~~i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v 131 (364)
T 2rb7_A 53 GIPSVMVLPE-KGRAGLLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMAL 131 (364)
T ss_dssp TEEEEEECSB-TTEEEEEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCE
T ss_pred CceEEEEEcC-CCCCeEEEECccCcCCCCCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccE
Confidence 7788875311 23468999999999974 5789999999999999999998765445 457 9
Q ss_pred EEEEeCcccC-CccChHHHHhhccccCceeEEEEecc
Q 004166 191 IFLFNGAEEL-FMLGAHGFMKAHKWRDSVGAVINVEA 226 (770)
Q Consensus 191 ~flf~~~EE~-gl~GS~~fi~~~~~~~~i~a~INlD~ 226 (770)
+|+|+.+||. |+.|++.++++. +.++.+++|.
T Consensus 132 ~~~~~~~EE~~g~~G~~~~~~~~----~~d~~i~~d~ 164 (364)
T 2rb7_A 132 GLLITGDEEIGGMNGAAKALPLI----RADYVVALDG 164 (364)
T ss_dssp EEEEESCGGGTSTTTHHHHGGGC----EEEEEEECSS
T ss_pred EEEEEeccccCchhhHHHHHhcC----CCCEEEEccC
Confidence 9999999996 679999998754 5778888885
No 34
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=99.22 E-value=3.3e-11 Score=134.50 Aligned_cols=127 Identities=15% Similarity=0.120 Sum_probs=101.3
Q ss_pred cHHHHHHHHHHHHHhcCCCC-------CCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceecccccccc
Q 004166 52 SEARAIQHVRVLADEIGDRQ-------EGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLG 124 (770)
Q Consensus 52 s~era~~~l~~L~~~ig~R~-------~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~ 124 (770)
..+++.+.+++|+ +|+... ..|.++.++++||.++++++| ++++.+
T Consensus 7 ~~~~~~~~l~~lv-~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G------~~v~~~-------------------- 59 (423)
T 1z2l_A 7 FRQAIEETLPWLS-SFGADPAGGMTRLLYSPEWLETQQQFKKRMAASG------LETRFD-------------------- 59 (423)
T ss_dssp HHHHHHHHHHHHH-HTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEC--------------------
T ss_pred cHHHHHHHHHHHH-hcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcC------CEEEEe--------------------
Confidence 3578899999999 565432 123556689999999999998 444331
Q ss_pred ccccceEEEEEeCCCCCCCCCeEEEeecCCCCCCCCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccC----
Q 004166 125 YRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSSPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEEL---- 200 (770)
Q Consensus 125 y~~~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE~---- 200 (770)
...|++++++|+++ ..+.|++.+|+|+||. .|..|++.|++++|++++.|++.+.+++++|+|+|+.+||.
T Consensus 60 --~~gnv~a~~~g~~~--~~~~i~l~~H~D~Vp~-~g~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~~ 134 (423)
T 1z2l_A 60 --EVGNLYGRLNGTEY--PQEVVLSGSHIDTVVN-GGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFP 134 (423)
T ss_dssp --TTSCEEEEECCSSE--EEEEEEEEEECCCCTT-BCSSTTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSSS
T ss_pred --cCCcEEEEEcCCCC--CCCEEEEEEecCCCCC-CCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccC
Confidence 12499999987531 2367999999999995 37889999999999999999988778899999999999997
Q ss_pred -CccChHHHHh
Q 004166 201 -FMLGAHGFMK 210 (770)
Q Consensus 201 -gl~GS~~fi~ 210 (770)
|+.||+.+..
T Consensus 135 ~g~~Gs~~~~~ 145 (423)
T 1z2l_A 135 YVFWGSKNIFG 145 (423)
T ss_dssp CSCHHHHHHTT
T ss_pred CCcccHHHHHc
Confidence 5679998876
No 35
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=99.21 E-value=1.2e-10 Score=128.76 Aligned_cols=141 Identities=21% Similarity=0.232 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceEE
Q 004166 53 EARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIV 132 (770)
Q Consensus 53 ~era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi 132 (770)
.++..+.+++|. ++ +.-|.+++++++||.++++++| ++++... . .+..|++
T Consensus 5 ~~~~~~~l~~lv-~~---ps~s~~e~~~~~~l~~~l~~~G------~~~~~~~--~-----------------~~~~nv~ 55 (393)
T 1vgy_A 5 ETQSLELAKELI-SR---PSVTPDDRDCQKLMAERLHKIG------FAAEEMH--F-----------------GNTKNIW 55 (393)
T ss_dssp CSHHHHHHHHHH-TS---CCBTTCCTTHHHHHHHHHHTTT------CEEEECC--B-----------------TTBCEEE
T ss_pred hHHHHHHHHHHh-cC---CCCCCCcHHHHHHHHHHHHHcC------CcEEEEe--c-----------------CCCcEEE
Confidence 456788888888 43 3344455578999999999998 4443311 1 1246999
Q ss_pred EEEeCCCCCCCCCeEEEeecCCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEE
Q 004166 133 MRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPII 191 (770)
Q Consensus 133 ~~i~g~~~~~~~~~Vll~aH~Dsv~~---------------------s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~ 191 (770)
+++ |+ +.+.|++.+|+|+||. ++|+.|+++|++++|++++.+.+.+.+++++|+
T Consensus 56 a~~-g~----~~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~ 130 (393)
T 1vgy_A 56 LRR-GT----KAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIA 130 (393)
T ss_dssp EEE-CS----SSSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEE
T ss_pred EEE-CC----CCCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 998 64 2468999999999984 468889999999999999999887777899999
Q ss_pred EEEeCcccC-CccChHHHHhhccc-cCceeEEEEeccC
Q 004166 192 FLFNGAEEL-FMLGAHGFMKAHKW-RDSVGAVINVEAS 227 (770)
Q Consensus 192 flf~~~EE~-gl~GS~~fi~~~~~-~~~i~a~INlD~~ 227 (770)
|+|+.+||. ++.|++.+++.... ..++++++..|..
T Consensus 131 ~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~~e~~ 168 (393)
T 1vgy_A 131 LLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPT 168 (393)
T ss_dssp EEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred EEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEEeCCC
Confidence 999999997 47899988764322 2356777776654
No 36
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.21 E-value=8.8e-11 Score=128.55 Aligned_cols=139 Identities=17% Similarity=0.117 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceEEE
Q 004166 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (770)
Q Consensus 54 era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi~ 133 (770)
+++.+.+++|. ++. .-|.++.++++||.++|+++|.+ .++++. ...|+++
T Consensus 13 ~~~~~~~~~l~-~~p---s~s~~e~~~~~~l~~~l~~~G~~-----~~~~~~---------------------~~~~~~a 62 (369)
T 3tx8_A 13 GDPIVLTQRLV-DIP---SPSGQEKQIADEIEDALRNLNLP-----GVEVFR---------------------FNNNVLA 62 (369)
T ss_dssp SCHHHHHHHHH-SSC---CBTTCTHHHHHHHHHHHHTTTCT-----TCEEEE---------------------ETTEEEE
T ss_pred HHHHHHHHHHh-cCC---CCCccHHHHHHHHHHHHHhcCCC-----CcEEec---------------------cCCcEEE
Confidence 34678888888 432 23455678999999999998732 133322 0248999
Q ss_pred EEeCCCCCCCCCeEEEeecCCCCCC--------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCccc
Q 004166 134 RISSTDSQDTDPSVLMNGHFDGPLS--------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEE 199 (770)
Q Consensus 134 ~i~g~~~~~~~~~Vll~aH~Dsv~~--------------s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE 199 (770)
+++|+ +.+.|++.+|+|+||. ++|+.|+++|+|++|++++.|++. .+++++|+|+|..+||
T Consensus 63 ~~~~~----~~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~EE 137 (369)
T 3tx8_A 63 RTNRG----LASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYECEE 137 (369)
T ss_dssp ECCCC----CSCEEEEEEECCBSCCCSCCSCEECSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECCCS
T ss_pred EecCC----CCCeEEEEcccCccCCCCCCCCeEECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEeccc
Confidence 99874 2468999999999985 489999999999999999999864 4678999999999999
Q ss_pred CCc--cChHHHHhhccccCceeEEEEeccC
Q 004166 200 LFM--LGAHGFMKAHKWRDSVGAVINVEAS 227 (770)
Q Consensus 200 ~gl--~GS~~fi~~~~~~~~i~a~INlD~~ 227 (770)
.|. .|++.++++++...+..++|+.|..
T Consensus 138 ~g~~~~G~~~~~~~~~~~~~~~~~i~~ep~ 167 (369)
T 3tx8_A 138 VADHLNGLGHIRDEHPEWLAADLALLGEPT 167 (369)
T ss_dssp SCTTSCHHHHHHHHCGGGGCCSEEEECCCC
T ss_pred cCcccccHHHHHHhcccccCCCEEEEeCCC
Confidence 987 7999999877433456788888864
No 37
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.19 E-value=9.6e-11 Score=129.72 Aligned_cols=156 Identities=19% Similarity=0.215 Sum_probs=111.2
Q ss_pred CCCcCcccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceecccccccc
Q 004166 45 DAPLDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLG 124 (770)
Q Consensus 45 ~~~~~~Fs~era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~ 124 (770)
+.+.-+.+.++..+.+++|. ++.. .|.++.++++||.++|+++| ++++.+.. +. ..
T Consensus 15 ~~~~~~~~~~~~~~~l~~L~-~ips---~s~~E~~~~~~l~~~l~~~G------~~v~~~~~---~~-----------~~ 70 (396)
T 3rza_A 15 LYFQGMINEQRLLNTFLELV-QIDS---ETGNESTIQPILKEKFIALG------LDVKEDEA---AK-----------HP 70 (396)
T ss_dssp ----CCSCHHHHHHHHHHHH-TSCC---BTTCTTTHHHHHHHHHHHTT------CEEEECSG---GG-----------ST
T ss_pred eeEEEeecHHHHHHHHHHHe-ecCC---CCcCHHHHHHHHHHHHHHCC------CEEEEecc---cc-----------cc
Confidence 33445667899999999999 5433 34555689999999999998 44444220 00 00
Q ss_pred ccccceEEEEEeCCCCCCCCCeEEEeecCCCCCC---------------CCCC----CCChhHHHHHHHHHHHHHhcCCC
Q 004166 125 YRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS---------------SPGA----GDCGSCVASMLELARLTIDSGWI 185 (770)
Q Consensus 125 y~~~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~---------------s~GA----~D~~sgva~~LE~ar~l~~~~~~ 185 (770)
.....||+++++|+.+..+.+.|++.+|+|+||. ++|+ .||++|++++|++++.|++.+.
T Consensus 71 ~~~~~nvia~~~g~~~~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~- 149 (396)
T 3rza_A 71 KLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI- 149 (396)
T ss_dssp TCSSCCEEEEECCCCC---CCCEEEEEECCBCSSCSSCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CCCCceEEEEECCcCCCCCCCeEEEEEECCccCCCCCcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-
Confidence 1124699999988511123577999999999962 4566 4999999999999999988764
Q ss_pred CCCCEEEEEeCcccCCccChHHHHhhccccCceeEEEEeccCC
Q 004166 186 PPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (770)
Q Consensus 186 ~~~~I~flf~~~EE~gl~GS~~fi~~~~~~~~i~a~INlD~~G 228 (770)
++++|.|+|+.+||.|..|++.+..+. -+....+++|..+
T Consensus 150 ~~~~v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~~~~~ 189 (396)
T 3rza_A 150 PHGQIQFVITVGEESGLIGAKELNSEL---LDADFGYAIDASA 189 (396)
T ss_dssp CCCCEEEEEESCGGGTSHHHHHCCGGG---CCCSEEEEEEESS
T ss_pred CCCCEEEEEEcccccccHhHhhhchhh---cccceEEEEecCC
Confidence 678999999999999999999876532 2345667777654
No 38
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.15 E-value=4e-10 Score=123.13 Aligned_cols=140 Identities=19% Similarity=0.217 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceEEE
Q 004166 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (770)
Q Consensus 54 era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi~ 133 (770)
++..+.+++|. ++ +.-|..++++++||.++++++| ++++.. . ..+..|+++
T Consensus 3 ~~~~~~~~~L~-~~---ps~s~~e~~~~~~l~~~l~~~g------~~~~~~--~-----------------~~~~~n~~a 53 (377)
T 3isz_A 3 EKVVSLAQDLI-RR---PSISPNDEGCQQIIAERLEKLG------FQIEWM--P-----------------FNDTLNLWA 53 (377)
T ss_dssp HHHHHHHHHHH-TS---CCBTTCCTTHHHHHHHHHHHTT------CEEEEC--C-----------------BTTBCEEEE
T ss_pred hHHHHHHHHHh-cC---CCCCCChhhHHHHHHHHHHHCC------CceEEe--e-----------------cCCCceEEE
Confidence 56778888888 43 3344455679999999999998 334321 0 123469999
Q ss_pred EEeCCCCCCCCCeEEEeecCCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEE
Q 004166 134 RISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (770)
Q Consensus 134 ~i~g~~~~~~~~~Vll~aH~Dsv~~---------------------s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~f 192 (770)
++ |+ +.+.|++.+|+|+||. ++|+.|++.|++++|++++.+.+.+.+++++|+|
T Consensus 54 ~~-g~----~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~ 128 (377)
T 3isz_A 54 KH-GT----SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIAL 128 (377)
T ss_dssp EE-ES----SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEE
T ss_pred Ee-CC----CCCEEEEeccccccCCCCcccCCCCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceEEE
Confidence 88 53 2468999999999984 3577899999999999999998877778899999
Q ss_pred EEeCcccCCc-cChHHHHhhccc-cCceeEEEEeccC
Q 004166 193 LFNGAEELFM-LGAHGFMKAHKW-RDSVGAVINVEAS 227 (770)
Q Consensus 193 lf~~~EE~gl-~GS~~fi~~~~~-~~~i~a~INlD~~ 227 (770)
+|..+||.+. .|++.+++.... ..++++++..|..
T Consensus 129 ~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~~~e~~ 165 (377)
T 3isz_A 129 LITSDEEATAKDGTIHVVETLMARDEKITYCMVGEPS 165 (377)
T ss_dssp EEESCSSSCCSSSHHHHHHHHHHTTCCCCEEEECCCC
T ss_pred EEEcccccCccccHHHHHHHHHhcCCCCCEEEEcCCC
Confidence 9999999876 699988764321 2346677766643
No 39
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.15 E-value=1.2e-10 Score=129.81 Aligned_cols=137 Identities=18% Similarity=0.221 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHhcCCCCCC--------ChhHHHHHHHHHHHHHhcccccCCcee-EEEEEeeecCcccceeccccccccc
Q 004166 55 RAIQHVRVLADEIGDRQEG--------RPGLREAAVYIKTQLEGIKERAGPKFR-IEIEENVVNGSFNMIFLGHSISLGY 125 (770)
Q Consensus 55 ra~~~l~~L~~~ig~R~~g--------S~~~e~a~~yl~~~l~~ig~~~~~~~~-vev~~~~~~g~~~~~~~~~~~~~~y 125 (770)
++.+.+++|. ++.+ +.+ +++++++++||.++++++| ++ ++++
T Consensus 3 ~~~~~l~~Lv-~i~s-~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G------~~~~~~~--------------------- 53 (417)
T 1fno_A 3 KLLERFLHYV-SLDT-QSKSGVRQVPSTEGQWKLLRLLKQQLEEMG------LVNITLS--------------------- 53 (417)
T ss_dssp SHHHHHHHHH-TSCC-BCCSSCSSSSSSHHHHHHHHHHHHHHHHHT------CEEEEEC---------------------
T ss_pred HHHHHHHHhE-EecC-CCCcccCCCCCCccHHHHHHHHHHHHHHcC------CCeEEEC---------------------
Confidence 4678899998 5543 233 2356689999999999998 33 3321
Q ss_pred cccceEEEEEeCCCCCCCCCeEEEeecCCCCCCC----------------------------------------------
Q 004166 126 RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS---------------------------------------------- 159 (770)
Q Consensus 126 ~~~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~s---------------------------------------------- 159 (770)
+..||+++++|+++ .+.+.|++.+|+|+||..
T Consensus 54 -~~~nvia~~~g~~~-~~~~~i~l~aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~g 131 (417)
T 1fno_A 54 -EKGTLMATLPANVE-GDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITT 131 (417)
T ss_dssp -TTCCEEEEECCSSC-SCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEEC
T ss_pred -CCceEEEEECCCCC-CCCCceEEEEeccccCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEc
Confidence 12599999987531 124679999999999642
Q ss_pred CCC----CCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccChHHHHhhccccCceeEEEEeccC
Q 004166 160 PGA----GDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEAS 227 (770)
Q Consensus 160 ~GA----~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE~gl~GS~~fi~~~~~~~~i~a~INlD~~ 227 (770)
.|+ .||++|+|++|++++.|++.+ .++++|+|+|+.+||.| .|++.+..+. + +.++.+++|..
T Consensus 132 rGat~l~~D~K~g~a~~l~a~~~l~~~~-~~~~~v~~~~~~~EE~g-~Ga~~~~~~~-~--~~d~~i~~d~~ 198 (417)
T 1fno_A 132 DGKTLLGADDKAGVAEIMTALAVLKGNP-IPHGDIKVAFTPDEEVG-KGAKHFDVEA-F--GAQWAYTVDGG 198 (417)
T ss_dssp CSSSCCCHHHHHHHHHHHHHHHHHHSSS-CCCCCEEEEEESCGGGT-CTTTTCCHHH-H--CCSEEEECCCC
T ss_pred CCccccccccHHhHHHHHHHHHHHHhCC-CCCCcEEEEEEeccccC-CChhhhchhh-c--CCCEEEEeCCC
Confidence 132 888999999999999999887 78899999999999998 8998776422 2 45678888864
No 40
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.13 E-value=5.9e-10 Score=125.99 Aligned_cols=126 Identities=17% Similarity=0.183 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCh----------hHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceecccccc
Q 004166 53 EARAIQHVRVLADEIGDRQEGRP----------GLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSIS 122 (770)
Q Consensus 53 ~era~~~l~~L~~~ig~R~~gS~----------~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~ 122 (770)
.+++.+.+++|. ++. .+.+.+ +..++++||.++++++| ++++. . +
T Consensus 13 ~~~~~~~l~~l~-~ip-s~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G------~~~~~----~-~------------ 67 (470)
T 1lfw_A 13 KDAILKDLEELI-AID-SSEDLENATEEYPVGKGPVDAMTKFLSFAKRDG------FDTEN----F-A------------ 67 (470)
T ss_dssp HHHHHHHHHHHH-TSC-CBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTT------CEEEE----E-T------------
T ss_pred HHHHHHHHHHHc-CCC-CcCCCccccccCCCcHHHHHHHHHHHHHHHHcC------CeEEE----e-c------------
Confidence 467888999998 443 333322 34589999999999998 44332 1 1
Q ss_pred ccccccceEEEEEeCCCCCCCCCeEEEeecCCCCCC--------------------CCCCCCChhHHHHHHHHHHHHHhc
Q 004166 123 LGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS--------------------SPGAGDCGSCVASMLELARLTIDS 182 (770)
Q Consensus 123 ~~y~~~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~--------------------s~GA~D~~sgva~~LE~ar~l~~~ 182 (770)
..++++++ |++ .+.|++.+|+|+||. ++|+.||+.|++++|++++.|++.
T Consensus 68 -----~~~~~~~~-g~~----~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~ 137 (470)
T 1lfw_A 68 -----NYAGRVNF-GAG----DKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEA 137 (470)
T ss_dssp -----TTEEEEEE-CCC----SSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHH
T ss_pred -----CeEEEEEe-CCC----CCeEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHc
Confidence 13667777 532 468999999999873 467799999999999999999988
Q ss_pred CCCCCCCEEEEEeCcccCCccChHHHHhhcc
Q 004166 183 GWIPPRPIIFLFNGAEELFMLGAHGFMKAHK 213 (770)
Q Consensus 183 ~~~~~~~I~flf~~~EE~gl~GS~~fi~~~~ 213 (770)
+.+++++|+|+|+.+||.|..|++.+++++.
T Consensus 138 ~~~~~~~i~~i~~~~EE~g~~G~~~~~~~~~ 168 (470)
T 1lfw_A 138 GFKPKKKIDFVLGTNEETNWVGIDYYLKHEP 168 (470)
T ss_dssp TCCCSSEEEEEEESCTTTTCHHHHHHHHHSC
T ss_pred CCCCCCCEEEEEecCcccCCccHHHHHHhCc
Confidence 8888999999999999999999999998654
No 41
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.13 E-value=1.4e-10 Score=132.39 Aligned_cols=141 Identities=23% Similarity=0.247 Sum_probs=108.3
Q ss_pred cCcccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccc
Q 004166 48 LDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRN 127 (770)
Q Consensus 48 ~~~Fs~era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~ 127 (770)
..+++.++..+.+++|. ++ |++ |.+++++++||.++++++| ++++.+ .
T Consensus 8 ~~~~~~~~~~~~~~~L~-~i-ps~--s~~e~~~~~~l~~~l~~~G------~~v~~~----------------------~ 55 (490)
T 3mru_A 8 ISTLSPAPLWQFFDKIC-SI-PHP--SKHEEALAQYIVTWATEQG------FDVRRD----------------------P 55 (490)
T ss_dssp GGGSSSHHHHHHHHHHH-HS-CCB--TTCCTTHHHHHHHHHHHTT------CEEEEC----------------------T
T ss_pred HhccCHHHHHHHHHHHh-CC-CCC--CCCHHHHHHHHHHHHHHcC------CEEEEc----------------------C
Confidence 35678899999999999 44 444 4445689999999999998 444331 1
Q ss_pred cceEEEEEeCCCCCCCCCeEEEeecCCCCCCC------------------------CCCC---CChhHHHHHHHHHHHHH
Q 004166 128 HTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS------------------------PGAG---DCGSCVASMLELARLTI 180 (770)
Q Consensus 128 ~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~s------------------------~GA~---D~~sgva~~LE~ar~l~ 180 (770)
..||+++++|+.+.++.+.|++.+|+|+||.. +|+. ||++|+|++|++++
T Consensus 56 ~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l~--- 132 (490)
T 3mru_A 56 TGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVLA--- 132 (490)
T ss_dssp TCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHHH---
T ss_pred CCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHHH---
Confidence 24999999875322345789999999999752 4775 99999999999763
Q ss_pred hcCCCCCCCEEEEEeCcccCCccChHHHHhhccccCceeEEEEeccC
Q 004166 181 DSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEAS 227 (770)
Q Consensus 181 ~~~~~~~~~I~flf~~~EE~gl~GS~~fi~~~~~~~~i~a~INlD~~ 227 (770)
....++.+|.|+|+.+||.|+.|++.++++. -+.+.++|+|+.
T Consensus 133 -~~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~---~~~~~~~~~d~~ 175 (490)
T 3mru_A 133 -SKEIKHGPIEVLLTIDEEAGMTGAFGLEAGW---LKGDILLNTDSE 175 (490)
T ss_dssp -CSSCCCCSEEEEEESCSSSTTGGGGTCCSSS---CCSSEEEECCCC
T ss_pred -hCCCCCCCEEEEEEcccccccHhHHHhhhcc---cCCCEEEEcCCC
Confidence 2335678999999999999999999887632 256789999965
No 42
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.13 E-value=4.2e-10 Score=128.42 Aligned_cols=135 Identities=17% Similarity=0.105 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCC----------hhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceecccccc
Q 004166 53 EARAIQHVRVLADEIGDRQEGR----------PGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSIS 122 (770)
Q Consensus 53 ~era~~~l~~L~~~ig~R~~gS----------~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~ 122 (770)
.+++.+.+++|. ++.. +.+. ++..++++|+.++++++| ++++..
T Consensus 33 ~~~~~~~l~~lv-~ips-~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G------~~~~~~------------------ 86 (492)
T 3khx_A 33 EDQIINDLKGLL-AIES-VRDDAKASEDAPVGPGPRKALDYMYEIAHRDG------FTTHDV------------------ 86 (492)
T ss_dssp HHHHHHHHHHHH-TSCC-CCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTT------CEEEEE------------------
T ss_pred HHHHHHHHHHHh-cCCC-CCCCcccccccccchHHHHHHHHHHHHHHHcC------CcceEe------------------
Confidence 467788888888 4433 2222 234589999999999998 333321
Q ss_pred ccccccceEEEEEe-CCCCCCCCCeEEEeecCCCCCC-------------------CCCCCCChhHHHHHHHHHHHHHhc
Q 004166 123 LGYRNHTNIVMRIS-STDSQDTDPSVLMNGHFDGPLS-------------------SPGAGDCGSCVASMLELARLTIDS 182 (770)
Q Consensus 123 ~~y~~~~NVi~~i~-g~~~~~~~~~Vll~aH~Dsv~~-------------------s~GA~D~~sgva~~LE~ar~l~~~ 182 (770)
.|+++.++ |+ .++.|++.+|+|+||. ++|+.||++|++++|++++.|++.
T Consensus 87 ------~~~~~~~~~g~----~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~ 156 (492)
T 3khx_A 87 ------DHIAGRIEAGK----GNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDM 156 (492)
T ss_dssp ------TTTEEEEEEEC----SSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHHT
T ss_pred ------CCEEEEEEeCC----CCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHHc
Confidence 14455554 32 2468999999999985 469999999999999999999998
Q ss_pred CCCCCCCEEEEEeCcccCCccChHHHHhhccccCceeEEEEecc
Q 004166 183 GWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEA 226 (770)
Q Consensus 183 ~~~~~~~I~flf~~~EE~gl~GS~~fi~~~~~~~~i~a~INlD~ 226 (770)
+.+++++|+|+|+.+||.|..|++.++++++ .....+..|.
T Consensus 157 ~~~~~~~i~~~~~~~EE~g~~g~~~~~~~~~---~~~~~~~~d~ 197 (492)
T 3khx_A 157 NVDWKKRIHMIIGTDEESDWKCTDRYFKTEE---MPTLGFAPDA 197 (492)
T ss_dssp TCCCSSEEEEEEECCTTCCCCTTSHHHHHSC---CCSEEECSSC
T ss_pred CCCCCCCEEEEEECCccCCCcCHHHHHHhCc---CCCEEEecCC
Confidence 8888999999999999999999999999875 2455556664
No 43
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.10 E-value=5.8e-10 Score=126.53 Aligned_cols=146 Identities=18% Similarity=0.237 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCC-------hh-HHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccc
Q 004166 54 ARAIQHVRVLADEIGDRQEGR-------PG-LREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGY 125 (770)
Q Consensus 54 era~~~l~~L~~~ig~R~~gS-------~~-~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y 125 (770)
+++.+.+++|. ++.. +.+. .+ ++++.+|+.++|+++|.+. .++++.. ..
T Consensus 18 ~~~~~~l~~lv-~ips-~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~---~~~~~~~--~~---------------- 74 (472)
T 3pfe_A 18 EEILPSLCDYI-KIPN-KSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKG---MTLEIVR--LK---------------- 74 (472)
T ss_dssp HTHHHHHHHHH-TCCC-BCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTT---CEEEEEC--CT----------------
T ss_pred HHHHHHHHHHh-CCCC-cCCCccccccccchHHHHHHHHHHHHHHcCCCC---cceEEEe--cC----------------
Confidence 44677788887 4433 2211 12 4589999999999998421 2233321 11
Q ss_pred cccceEEEEEeCCCCCCCCCeEEEeecCCCCCC---------------------CCCCCCChhHHHHHHHHHHHHHhcCC
Q 004166 126 RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLS---------------------SPGAGDCGSCVASMLELARLTIDSGW 184 (770)
Q Consensus 126 ~~~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~---------------------s~GA~D~~sgva~~LE~ar~l~~~~~ 184 (770)
....||+++++|+ +.+.|++.+|+|+||. ++|+.||++|+|++|++++.|++.+.
T Consensus 75 ~~~~~v~a~~~g~----~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~ 150 (472)
T 3pfe_A 75 NRTPLLFMEIPGQ----IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGL 150 (472)
T ss_dssp TSCCEEEEEECCS----EEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTC
T ss_pred CCCcEEEEEEcCC----CCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCC
Confidence 1136999999873 2468999999998762 47899999999999999999998876
Q ss_pred CCCCCEEEEEeCcccCCccChHHHHhhcc-ccCceeEEEEeccC
Q 004166 185 IPPRPIIFLFNGAEELFMLGAHGFMKAHK-WRDSVGAVINVEAS 227 (770)
Q Consensus 185 ~~~~~I~flf~~~EE~gl~GS~~fi~~~~-~~~~i~a~INlD~~ 227 (770)
+++ +|+|+|..+||.|..|++.++++++ ..+++++++.+|..
T Consensus 151 ~~~-~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~~ 193 (472)
T 3pfe_A 151 PYP-RCILIIEACEESGSYDLPFYIELLKERIGKPSLVICLDSG 193 (472)
T ss_dssp CCE-EEEEEEESCGGGTSTTHHHHHHHHHHHHCCCSEEEEECCB
T ss_pred CCC-cEEEEEEeCCCCCChhHHHHHHHhHhhccCCCEEEEeCCC
Confidence 666 9999999999999999999998763 22478899999954
No 44
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.07 E-value=6.1e-10 Score=122.12 Aligned_cols=130 Identities=21% Similarity=0.289 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCh---hHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccc
Q 004166 53 EARAIQHVRVLADEIGDRQEGRP---GLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHT 129 (770)
Q Consensus 53 ~era~~~l~~L~~~ig~R~~gS~---~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~ 129 (770)
.+++.+.+++|. ++.. ..... ++.++++||.++++ | ++++.+.. . ....
T Consensus 8 ~~~~~~~l~~l~-~ips-~s~~~~~~~e~~~~~~l~~~l~--G------~~~~~~~~--~----------------~~~~ 59 (369)
T 2f7v_A 8 LASTLEHLETLV-SFDT-RNPPRAIAAEGGIFDYLRAQLP--G------FQVEVIDH--G----------------DGAV 59 (369)
T ss_dssp HHHHHHHHHHHH-HSCC-BTTTTCCCSSSHHHHHHHTTCT--T------CEEEEEEC--S----------------TTCE
T ss_pred hHHHHHHHHHHh-CCCC-cCCCCCCccHHHHHHHHHHHhC--C------CceEEEEc--C----------------CCce
Confidence 467889999998 5543 22112 45589999999998 6 44544321 0 1236
Q ss_pred eEEEEEeCCCCCCCCCeEEEeecCCCCCC-------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCE
Q 004166 130 NIVMRISSTDSQDTDPSVLMNGHFDGPLS-------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPI 190 (770)
Q Consensus 130 NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~-------------------s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I 190 (770)
|+++ ++|+ +.|++.+|+|+||. ++|+.||+.|++++|++++. ++++|
T Consensus 60 ~~~a-~~g~------~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~~v 125 (369)
T 2f7v_A 60 SLYA-VRGT------PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDGDA 125 (369)
T ss_dssp EEEE-EESC------CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CCCCE
T ss_pred EEEE-EcCC------CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CCCCE
Confidence 9999 9864 45999999999974 46899999999999999985 67899
Q ss_pred EEEEeCcccC-CccChHHHHhhccccCceeEEEEeccC
Q 004166 191 IFLFNGAEEL-FMLGAHGFMKAHKWRDSVGAVINVEAS 227 (770)
Q Consensus 191 ~flf~~~EE~-gl~GS~~fi~~~~~~~~i~a~INlD~~ 227 (770)
+|+|+.+||. |+.|++.++++.. +.++++++|..
T Consensus 126 ~~~~~~~EE~~g~~G~~~~~~~~~---~~d~~i~~e~~ 160 (369)
T 2f7v_A 126 AFLFSSDEEANDPRCIAAFLARGL---PYDAVLVAEPT 160 (369)
T ss_dssp EEEEESCTTSSSCCHHHHHHTTCC---CCSEEEECCCS
T ss_pred EEEEEeCcccCCCcCHHHHHhcCC---CCCEEEECCCC
Confidence 9999999999 8999999998653 56778888764
No 45
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.06 E-value=1.5e-09 Score=118.03 Aligned_cols=221 Identities=15% Similarity=0.080 Sum_probs=139.0
Q ss_pred HHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceEEEE
Q 004166 55 RAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMR 134 (770)
Q Consensus 55 ra~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi~~ 134 (770)
+..+.+++|. ++.+ ++ ..++.+++||.+++++++ .+++++ +..|++++
T Consensus 6 ~~~~~l~~Lv-~~~s-~s--g~e~~~~~~l~~~l~~~g------~~~~~d----------------------~~gnlia~ 53 (346)
T 1vho_A 6 ETGKLLMELS-NLDG-PS--GYETNVVSYIKSVIEPFV------DEAKTT----------------------RHGSLIGY 53 (346)
T ss_dssp CHHHHHHHHH-HSCC-BT--TCCHHHHHHHHHHHGGGC------SEEEEC----------------------TTSCEEEE
T ss_pred HHHHHHHHHH-cCCC-CC--cchHHHHHHHHHHHHhhC------CEEEEe----------------------cCCcEEEE
Confidence 3567899999 4432 33 344579999999999988 344432 13599999
Q ss_pred EeCCCCCCCCCeEEEeecCCCCCC---------------------------------C----------------------
Q 004166 135 ISSTDSQDTDPSVLMNGHFDGPLS---------------------------------S---------------------- 159 (770)
Q Consensus 135 i~g~~~~~~~~~Vll~aH~Dsv~~---------------------------------s---------------------- 159 (770)
++|++ .+.|++++|+|+|+. .
T Consensus 54 ~~g~~----~~~i~l~aH~DtV~~~v~~i~~G~l~~~~~Gg~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~ 129 (346)
T 1vho_A 54 KKGKG----IGKLAFFAHVDEIGFVVSKVEGQFARLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESRKK 129 (346)
T ss_dssp ECCSS----SCEEEEEEECCBCCEEEEEEETTEEEEEEC--------CCCEEEEEETTEEEEEETTCCCSCCCCHHHHHT
T ss_pred EcCCC----CceEEEEecCcccceEeEEecCCeEEEEEeCCccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhccc
Confidence 98752 367999999999941 0
Q ss_pred -------------------CC-------------------CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCC
Q 004166 160 -------------------PG-------------------AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELF 201 (770)
Q Consensus 160 -------------------~G-------------------A~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE~g 201 (770)
.| +.||..|+++++++++.+++.+ ++.++.++|+..||.|
T Consensus 130 ~~~~~~l~id~g~~~eei~~G~~~~~~~~~~~~g~~i~g~~~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG 207 (346)
T 1vho_A 130 VPTYDEIFVDLSLCERGVRVGDIAVIDQTAFETNGKVVGKALDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEETG 207 (346)
T ss_dssp SCCTTCCEEEGGGSSSCCCTTCEEEECCCCEEETTEEEETTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTSSS
T ss_pred CCChhHeEEEeccchhcCCCCCEEEEccchhhhcCeEEeccCccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcccc
Confidence 01 4799999999999999997653 5579999999999999
Q ss_pred ccChHHHHhhccccCceeEEEEeccCCCCCCce----EEeeCC--------CCchhhHhhhhc---cCccccccccccCC
Q 004166 202 MLGAHGFMKAHKWRDSVGAVINVEASGTGGLDL----VCQSGP--------SSWPSSVYAQSA---IYPMAHSAAQDVFP 266 (770)
Q Consensus 202 l~GS~~fi~~~~~~~~i~a~INlD~~G~gg~~~----lfq~gp--------~~~~~~~y~~~~---~~p~~~~l~~e~f~ 266 (770)
..|++.... . -+....|.+|....++..- ....|| ++.+.+...+.+ ..|+ +. .
T Consensus 208 ~~Ga~~~~~--~--i~~~~~i~~D~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~l~~~~~~~a~~~gi~~-----~~--~ 276 (346)
T 1vho_A 208 CLGALTGAY--E--INPDAAIVMDVTFASEPPFSDHIELGKGPVIGLGPVVDRNLVQKIIEIAKKHNVSL-----QE--E 276 (346)
T ss_dssp HHHHHHTTC--C--CCCSEEEEEEEECCCCTTSCCCCCTTSCCEEECSTTSCHHHHHHHHHHHHHTTCCC-----EE--E
T ss_pred hhhHHHHhc--c--cCCCEEEEeecccccCCCCCcccccCCCceEEeCCcCCHHHHHHHHHHHHHCCCCE-----EE--E
Confidence 999886432 1 1234567778765442110 000111 111111111111 1111 00 1
Q ss_pred CC-C-CCCchHHHhccCCCCcEEEEEEecCCccCcCcCcccCCCCHHHHHHHHHHHHHHHHHHhc
Q 004166 267 VI-P-GDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSN 329 (770)
Q Consensus 267 ~i-p-s~tD~~~F~~~~~gIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (770)
.. . ++||...+.....|+|.+++.-- .. ..||+. |+++.+.++...+.+.++++.+..
T Consensus 277 ~~~g~ggsDa~~~~~~~~gipt~~lg~~-~~-~~Hs~~---E~~~~~dl~~~~~ll~~~~~~~~~ 336 (346)
T 1vho_A 277 AVGGRSGTETDFVQLVRNGVRTSLISIP-LK-YMHTPV---EMVDPRDVEELARLLSLVAVELEV 336 (346)
T ss_dssp SSCCC----CTTHHHHHTTCEEEEEEEE-CB-STTSTT---EEECHHHHHHHHHHHHHHHHHCC-
T ss_pred eCCCCCCchHHHHHHhCCCCcEEEEehh-hc-ccccHH---HhcCHHHHHHHHHHHHHHHHHhhh
Confidence 12 2 67998888421269999986543 33 489874 566789999999999999987755
No 46
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.05 E-value=2.5e-09 Score=116.18 Aligned_cols=150 Identities=14% Similarity=0.001 Sum_probs=94.2
Q ss_pred CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccChHHHHhhccccCceeEEEEeccCCCCCCce-------
Q 004166 162 AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGGLDL------- 234 (770)
Q Consensus 162 A~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE~gl~GS~~fi~~~~~~~~i~a~INlD~~G~gg~~~------- 234 (770)
+.||..|+++++++++.+++.+ ++.++.++++.+||.|..|++...... ...+.|++|+...++..-
T Consensus 167 ~~D~k~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~~i----~~~~~i~~D~~~~~~~~~~~~~~~~ 240 (348)
T 1ylo_A 167 AFDDRLSCYLLVTLLRELHDAE--LPAEVWLVASSSEEVGLRGGQTATRAV----SPDVAIVLDTACWAKNFDYGAANHR 240 (348)
T ss_dssp THHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEESCCTTSSHHHHHHHHHH----CCSEEEEECCCCCSSTTCCSTTCCC
T ss_pred CcccHHHHHHHHHHHHHhhhcC--CCceEEEEEEcccccchhHHHHhhccc----CCCEEEEEeccccCCCCCCCccccc
Confidence 4799999999999999987643 568999999999999999988654422 234678888876543211
Q ss_pred --------EEeeCCC---CchhhHhhhh---ccCccccccccccCCCCCCCCchHHHhccCCCCcEEEEEEecCCccCcC
Q 004166 235 --------VCQSGPS---SWPSSVYAQS---AIYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHT 300 (770)
Q Consensus 235 --------lfq~gp~---~~~~~~y~~~---~~~p~~~~l~~e~f~~ips~tD~~~F~~~~~gIPgld~a~~~~~~~YHT 300 (770)
.....+. +.+.+...+. ...|+-. +...+++||...+.....|+|.+++.- ... ..||
T Consensus 241 ~~~~G~~i~~~~~~~~~~~~l~~~~~~~a~~~gi~~~~------~~~~~ggsDa~~~~~~~~gipt~~lg~-~~~-~~Hs 312 (348)
T 1ylo_A 241 QIGNGPMLVLSDKSLIAPPKLTAWIETVAAEIGVPLQA------DMFSNGGTDGGAVHLTGTGVPTLVMGP-ATR-HGHC 312 (348)
T ss_dssp CTTSCCEEEEECSSCBCCHHHHHHHHHHHHHHTCCCEE------EECSSCCCHHHHHHTSTTCCCEEEEEC-CCB-SCSS
T ss_pred cCCCCcEEEEeCCCCCCCHHHHHHHHHHHHHcCCCeEE------eecCCCcchHHHHHHhcCCCCEEEECc-ccC-cCCC
Confidence 0000000 0111111110 0111100 011357899998853226999997643 333 4898
Q ss_pred cCcccCCCCHHHHHHHHHHHHHHHHHHh
Q 004166 301 SHDTVDRLLPGSVQARGDNLFNVLKAFS 328 (770)
Q Consensus 301 ~~Dt~d~id~~~lq~~g~~~l~l~~~la 328 (770)
+. |+++.+.+....+.+.++++.++
T Consensus 313 ~~---E~~~~~d~~~~~~ll~~~~~~l~ 337 (348)
T 1ylo_A 313 AA---SIADCRDILQMEQLLSALIQRLT 337 (348)
T ss_dssp SC---EEEEHHHHHHHHHHHHHHHHTCC
T ss_pred cc---eEeeHHHHHHHHHHHHHHHHHhh
Confidence 74 56678899999998888887664
No 47
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.03 E-value=2.8e-09 Score=116.68 Aligned_cols=222 Identities=17% Similarity=0.092 Sum_probs=147.9
Q ss_pred HHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceEEEE
Q 004166 55 RAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMR 134 (770)
Q Consensus 55 ra~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi~~ 134 (770)
+..+.+++|++. |.++| .++++++|+++++++++ .++++| +..|++++
T Consensus 4 ~~~~~l~~L~~i--ps~SG--~E~~v~~~l~~~l~~~g------~~~~~D----------------------~~GNli~~ 51 (355)
T 3kl9_A 4 TLFSKIKEVTEL--AAVSG--HEAPVRAYLREKLTPHV------DEVVTD----------------------GLGGIFGI 51 (355)
T ss_dssp HHHHHHHHHHTS--CCBTT--CCHHHHHHHHHHHGGGS------SEEEEC----------------------TTSCEEEE
T ss_pred HHHHHHHHHHhC--CCCCC--CHHHHHHHHHHHHHHhC------CEEEEC----------------------CCCeEEEE
Confidence 467889999843 33444 45689999999999988 334432 23599999
Q ss_pred EeCCCCCCCCCeEEEeecCCCCCC--------------------------------------------------------
Q 004166 135 ISSTDSQDTDPSVLMNGHFDGPLS-------------------------------------------------------- 158 (770)
Q Consensus 135 i~g~~~~~~~~~Vll~aH~Dsv~~-------------------------------------------------------- 158 (770)
++|++ ++.+.|++.||+|+++-
T Consensus 52 ~~g~~--~~~~~v~l~aHmD~Vg~mV~~I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~~~ 129 (355)
T 3kl9_A 52 KHSEA--VDAPRVLVASHMDEVGFMVSEIKPDGTFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKGG 129 (355)
T ss_dssp ECCCS--TTCCEEEEEEECCBCEEEEEEECTTSCEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC------------
T ss_pred ECCcC--CCCCeEEEEeccccccceEEEECCCCEEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccChhhc
Confidence 98863 13468999999999862
Q ss_pred -----------------------------------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEE
Q 004166 159 -----------------------------------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPII 191 (770)
Q Consensus 159 -----------------------------------------------s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~ 191 (770)
...+-||.+||++++|+++.+++. +++++++
T Consensus 130 ~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~~--~~~~~v~ 207 (355)
T 3kl9_A 130 PTMPAIADIVFDGGFADKAEAESFGIRPGDTIVPDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQ--KLGNELY 207 (355)
T ss_dssp ---CCGGGSCEECCCSSHHHHHHTTCCTTCEEEECCCCEECTTSSEEEESCHHHHHHHHHHHHHHHHHSSC--CCSSEEE
T ss_pred cCCCChhhEEEEeccCCHHHHHHcCCCCCCEEEeccceEEecCCCEEEeeccccHHHHHHHHHHHHHhhhc--CCCceEE
Confidence 124779999999999999999754 5789999
Q ss_pred EEEeCcccCCccChHHHHhhccccCceeEEEEeccCCCCC-----------CceEEee-CC--CCchhhHhhh---hccC
Q 004166 192 FLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGG-----------LDLVCQS-GP--SSWPSSVYAQ---SAIY 254 (770)
Q Consensus 192 flf~~~EE~gl~GS~~fi~~~~~~~~i~a~INlD~~G~gg-----------~~~lfq~-gp--~~~~~~~y~~---~~~~ 254 (770)
++|+..||.|+.|++....... ...+|.+|++..+. ..+.... +. ++.+.+...+ ...-
T Consensus 208 ~~ft~qEEvG~~Ga~~a~~~~~----pd~~i~~D~~~a~d~p~~~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a~~~gI 283 (355)
T 3kl9_A 208 LGSNVQEEVGLRGAHTSTTKFD----PEVFLAVDCSPAGDVYGGQGKIGDGTLIRFYDPGHLLLPGMKDFLLTTAEEAGI 283 (355)
T ss_dssp EEEESCCTTTSHHHHHHHHHHC----CSEEEEEEEEECCGGGTSSCCTTSCEEEEEEETTEECCHHHHHHHHHHHHHTTC
T ss_pred EEEECccccCcchhHHHHhccC----CCEEEEecCccCCCCCCcccccCCCcEEEEecCCCCCCHHHHHHHHHHHHHcCC
Confidence 9999999999999987665331 23478888753332 1122211 11 1122222211 1122
Q ss_pred ccccccccccCCCCCCCCchHHHhccCCCCcEEEEEEecCCccCcCcCcccCCCCHHHHHHHHHHHHHHHHHHh
Q 004166 255 PMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFS 328 (770)
Q Consensus 255 p~~~~l~~e~f~~ips~tD~~~F~~~~~gIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la 328 (770)
|+-. . . ..++||-..+.....|+|..++..- .. ..||+. |.++.+.+++..+.+.++++.+.
T Consensus 284 p~q~-~----~--~ggGtDa~~i~~a~~Gipt~~igvp-~~-~~Hs~~---E~~~~~Di~~~~~ll~~~l~~l~ 345 (355)
T 3kl9_A 284 KYQY-Y----C--GKGGTDAGAAHLKNGGVPSTTIGVC-AR-YIHSHQ---TLYAMDDFLEAQAFLQALVKKLD 345 (355)
T ss_dssp CEEE-E----E--CSSCCTHHHHTTSTTCCCEEEEEEE-EB-SCSSSC---EEEEHHHHHHHHHHHHHHHHTCC
T ss_pred CEEE-E----C--CCcchHHHHHHHhCCCCCEEEEccC-cC-CCCCcc---eEeeHHHHHHHHHHHHHHHHHhC
Confidence 3221 1 1 1268998887532368999987542 22 388876 56678889998898888887663
No 48
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.03 E-value=8.7e-10 Score=125.49 Aligned_cols=140 Identities=20% Similarity=0.201 Sum_probs=105.4
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccc
Q 004166 50 RFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHT 129 (770)
Q Consensus 50 ~Fs~era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~ 129 (770)
+.+.+++.+.+++|. ++ |.+ |.++.++++||.++++++| ++++.+ ...
T Consensus 7 ~~~~~~~~~~~~~l~-~i-ps~--s~~e~~~~~~l~~~l~~~G------~~~~~~----------------------~~~ 54 (487)
T 2qyv_A 7 SLQPKLLWQWFDQIC-AI-PHP--SYKEEQLAQFIINWAKTKG------FFAERD----------------------EVG 54 (487)
T ss_dssp CSSSHHHHHHHHHHH-HS-CCB--TTCCHHHHHHHHHHHHHTT------CEEEEC----------------------TTC
T ss_pred ccCHHHHHHHHHHHH-cC-CCC--CCcHHHHHHHHHHHHHHcC------CEEEEc----------------------CCC
Confidence 456788999999999 54 333 3455689999999999998 344331 125
Q ss_pred eEEEEEeCCCCCCCCCeEEEeecCCCCCCC------------------------CCCC---CChhHHHHHHHHHHHHHhc
Q 004166 130 NIVMRISSTDSQDTDPSVLMNGHFDGPLSS------------------------PGAG---DCGSCVASMLELARLTIDS 182 (770)
Q Consensus 130 NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~s------------------------~GA~---D~~sgva~~LE~ar~l~~~ 182 (770)
|++++++|+...++.+.|++.+|+|+||.. +|+. ||+.|+|++|++++. .
T Consensus 55 nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~~---~ 131 (487)
T 2qyv_A 55 NVLIRKPATVGMENRKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLES---N 131 (487)
T ss_dssp CEEEEECCCTTCTTBCCEEEEEESCBCCC----------CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHHC---S
T ss_pred cEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHHh---C
Confidence 999999874210134679999999999853 2665 999999999999973 2
Q ss_pred CCCCCCCEEEEEeCcccCCccChHHHHhhccccCceeEEEEeccCC
Q 004166 183 GWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASG 228 (770)
Q Consensus 183 ~~~~~~~I~flf~~~EE~gl~GS~~fi~~~~~~~~i~a~INlD~~G 228 (770)
+ .++++|+|+|+.+||.|..|++.++++. . +.++++++|..+
T Consensus 132 ~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~--~~d~~~~~d~~~ 173 (487)
T 2qyv_A 132 D-IAHPELEVLLTMTEERGMEGAIGLRPNW-L--RSEILINTDTEE 173 (487)
T ss_dssp S-SCCSSEEEEEESCTTTTCHHHHTCCSSC-C--CCSEEEECCCCC
T ss_pred C-CCCCCEEEEEEeccccCCHHHHHHHHhc-c--CCCEEEEEccCC
Confidence 3 3678999999999999999999887643 2 367788988764
No 49
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=99.02 E-value=3.6e-09 Score=118.06 Aligned_cols=135 Identities=18% Similarity=0.200 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceEEE
Q 004166 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (770)
Q Consensus 54 era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi~ 133 (770)
++..+.+++|. ++ |. -|.+++++++||.++++++| ++++.+. ...|+++
T Consensus 28 ~~~i~~~~~l~-~i-ps--~s~~e~~~~~~l~~~l~~~G------~~v~~~~---------------------~~~~l~a 76 (418)
T 1xmb_A 28 DWMVKIRRKIH-EN-PE--LGYEELETSKLIRSELELIG------IKYRYPV---------------------AITGVIG 76 (418)
T ss_dssp HHHHHHHHHHH-HS-CC--CTTCCHHHHHHHHHHHHHHT------CCEEEEE---------------------TTTEEEE
T ss_pred HHHHHHHHHHH-hC-CC--CCCChHHHHHHHHHHHHHcC------CeeEecc---------------------CCcEEEE
Confidence 66788888888 43 32 33456689999999999998 4444321 1259999
Q ss_pred EEeCCCCCCCCCeEEEeecCCCCCCCC-----------CC---CCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCccc
Q 004166 134 RISSTDSQDTDPSVLMNGHFDGPLSSP-----------GA---GDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEE 199 (770)
Q Consensus 134 ~i~g~~~~~~~~~Vll~aH~Dsv~~s~-----------GA---~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE 199 (770)
+++|++ + +.|++.+|+|+||.+. |. .+...|++++|++++.|++.+.+++++|+|+|+.+||
T Consensus 77 ~~~~~~---~-~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE 152 (418)
T 1xmb_A 77 YIGTGE---P-PFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEE 152 (418)
T ss_dssp EEESSS---S-CEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTT
T ss_pred EEcCCC---C-CEEEEEecccccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEecccc
Confidence 998752 3 6899999999998421 21 1113899999999999998777788999999999999
Q ss_pred CCccChHHHHhhccccCceeEEEEec
Q 004166 200 LFMLGAHGFMKAHKWRDSVGAVINVE 225 (770)
Q Consensus 200 ~gl~GS~~fi~~~~~~~~i~a~INlD 225 (770)
|..|++.++++.. .++++++++++
T Consensus 153 -g~~G~~~~~~~g~-~~~~d~~i~~~ 176 (418)
T 1xmb_A 153 -GLSGAKKMREEGA-LKNVEAIFGIH 176 (418)
T ss_dssp -TTCHHHHHHHTTT-TTTEEEEEEEE
T ss_pred -ccccHHHHHHcCC-cCCCCEEEEEe
Confidence 9999999998553 23467777754
No 50
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=98.98 E-value=1.8e-09 Score=116.60 Aligned_cols=221 Identities=12% Similarity=-0.038 Sum_probs=136.6
Q ss_pred HHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceEEEEE
Q 004166 56 AIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRI 135 (770)
Q Consensus 56 a~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi~~i 135 (770)
..+.+++|+ ++.+ .|..++..++||.+++++++.+. ++|.....+ .+..|+++++
T Consensus 19 ~~~~l~~Lv-~i~s---~sg~e~~v~~~l~~~l~~~g~~v------~~d~~~~~~---------------~~~gnlia~~ 73 (321)
T 3cpx_A 19 GMQLLKELC-SIHA---PSGNEEPLKDFILEYIRSNAGSW------SYQPVIYAD---------------NDLQDCIVLV 73 (321)
T ss_dssp HHHHHHHHH-HSCC---BTTCCHHHHHHHHHHHHHHGGGS------SSCCEEECS---------------GGGTTCEEEE
T ss_pred HHHHHHHHH-cCCC---CCCCHHHHHHHHHHHHHhhCCeE------EEccccccc---------------cCCccEEEEe
Confidence 678899999 4432 33445578999999999998532 222111111 1246999998
Q ss_pred eCCCCCCCCCeEEEeecCCCCC----------------------------C----------------------CCC----
Q 004166 136 SSTDSQDTDPSVLMNGHFDGPL----------------------------S----------------------SPG---- 161 (770)
Q Consensus 136 ~g~~~~~~~~~Vll~aH~Dsv~----------------------------~----------------------s~G---- 161 (770)
+| + +.|++.+|+|+|+ . .+|
T Consensus 74 ~g-~-----~~ill~aH~DtV~~~v~~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~ 147 (321)
T 3cpx_A 74 FG-N-----PRTAVFAHMDSIGFTVSYNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVT 147 (321)
T ss_dssp ES-S-----CSEEEEEECCBCEEEECSTTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEE
T ss_pred cC-C-----ceEEEEecCCcCCeEecccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEE
Confidence 76 1 3599999999983 0 022
Q ss_pred ---------------CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccChHHHH---hhccccCceeEEEE
Q 004166 162 ---------------AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFM---KAHKWRDSVGAVIN 223 (770)
Q Consensus 162 ---------------A~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE~gl~GS~~fi---~~~~~~~~i~a~IN 223 (770)
+.||++|+++++|+++.++ + +.++|++.||.|+.|++... .+ .-+..++|+
T Consensus 148 ~~~~~~~~~g~i~~~~~D~k~G~aa~l~al~~l~-------~-i~~~~t~~EEvG~~Ga~~a~~~~~~---~~~~~~~i~ 216 (321)
T 3cpx_A 148 FKPDFREEGDFILTPYLDDRLGVWTALELAKTLE-------H-GIIAFTCWEEHGGGSVAYLARWIYE---TFHVKQSLI 216 (321)
T ss_dssp ECCCCEEETTEEECTTHHHHHHHHHHHHHTTTCC-------S-EEEEEESSTTTTCCSHHHHHHHHHH---HHCCCEEEE
T ss_pred eccCcEEEcCEEEEcCCcCHHHHHHHHHHHHHhc-------C-cEEEEECCccCchhcchhhhhcccc---ccCCCEEEE
Confidence 5899999999999998653 2 99999999999999998632 21 123467899
Q ss_pred eccCCCCC-------CceEEeeCCC--CchhhHhhhhccCccccccccccCCCCCCCCchHHHhccCCCCcEEEEEEecC
Q 004166 224 VEASGTGG-------LDLVCQSGPS--SWPSSVYAQSAIYPMAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIG 294 (770)
Q Consensus 224 lD~~G~gg-------~~~lfq~gp~--~~~~~~y~~~~~~p~~~~l~~e~f~~ips~tD~~~F~~~~~gIPgld~a~~~~ 294 (770)
+|....+. ..+....++. +.+.+...+.+.. .+-.. + .+...+++||-..+.....|+|.+++.-..
T Consensus 217 ~D~~~~~~~~~~~~G~~i~~~~~~~~~~~l~~~~~~~a~~-~gi~~-q-~~~~~~GGsD~~~~~~s~~Gipt~~lG~~~- 292 (321)
T 3cpx_A 217 CDITWVTEGVEAGKGVAISMRDRMIPRKKYVNRIIELARQ-TDIPF-Q-LEVEGAGASDGRELQLSPYPWDWCFIGAPE- 292 (321)
T ss_dssp CCCEECCSSSCTTSCEEEEEESSSCCCHHHHHHHHHHHTT-SSCCE-E-EEECSSCCCHHHHHHHSSSCCBCCBEECEE-
T ss_pred EeCccccCCcccCCCcEEEECCCCCCCHHHHHHHHHHHHH-cCCCE-E-EEeCCCCCccHHHHHHhCCCCCEEEEchhh-
Confidence 99875432 1111111111 1112211111110 00000 1 011246789988874323799999776443
Q ss_pred CccCcCcCcccCCCCHHHHHHHHHHHHHHHHH
Q 004166 295 GYYYHTSHDTVDRLLPGSVQARGDNLFNVLKA 326 (770)
Q Consensus 295 ~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~ 326 (770)
...||+.. +++.+.++...+.+.++++.
T Consensus 293 -~~~Hs~~E---~~~~~dl~~~~~ll~~~~~~ 320 (321)
T 3cpx_A 293 -KDAHTPNE---CVHKKDIESMVGLYKYLMEK 320 (321)
T ss_dssp -BSTTSTTC---EEEHHHHHHHHHHHHHHHHH
T ss_pred -cccchhhh---heeHHHHHHHHHHHHHHHHh
Confidence 34798664 55688888888888887764
No 51
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=98.98 E-value=3.9e-09 Score=117.24 Aligned_cols=137 Identities=22% Similarity=0.201 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceEE
Q 004166 53 EARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIV 132 (770)
Q Consensus 53 ~era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi 132 (770)
.+++.+.+++|. ++ |. -|.+++++++||.++++++| ++++.+. ....|++
T Consensus 31 ~~~~i~~~~~l~-~i-ps--~s~~e~~~~~~l~~~l~~~G------~~v~~~~--------------------~~~~nv~ 80 (404)
T 1ysj_A 31 HTRLINMRRDLH-EH-PE--LSFQEVETTKKIRRWLEEEQ------IEILDVP--------------------QLKTGVI 80 (404)
T ss_dssp HHHHHHHHHHHH-HS-CC--CTTCCHHHHHHHHHHHHHTT------CEECCCT--------------------TCSSCEE
T ss_pred HHHHHHHHHHHH-hc-CC--CCCChHHHHHHHHHHHHHcC------CceEEec--------------------cCCceEE
Confidence 466788888888 43 32 34456689999999999998 3332210 0135999
Q ss_pred EEEeCCCCCCCCCeEEEeecCCCCCCCC-----------C---CCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcc
Q 004166 133 MRISSTDSQDTDPSVLMNGHFDGPLSSP-----------G---AGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAE 198 (770)
Q Consensus 133 ~~i~g~~~~~~~~~Vll~aH~Dsv~~s~-----------G---A~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~E 198 (770)
++++|++ +.+.|++.+|+|+||.+. | +.+.+.|+|++|++++.|++.+.+++++|+|+|+.+|
T Consensus 81 a~~~g~~---~~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~E 157 (404)
T 1ysj_A 81 AEIKGRE---DGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAE 157 (404)
T ss_dssp EEEECSS---CCCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCT
T ss_pred EEEeCCC---CCCEEEEEEecccccCCCCCCCCcccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEeccc
Confidence 9998753 247899999999998531 2 1233589999999999999876678899999999999
Q ss_pred cCCccChHHHHhhccccCceeEEEEe
Q 004166 199 ELFMLGAHGFMKAHKWRDSVGAVINV 224 (770)
Q Consensus 199 E~gl~GS~~fi~~~~~~~~i~a~INl 224 (770)
|. ..|++.++++. +.+++++++.+
T Consensus 158 E~-~~G~~~~~~~g-~~~~~d~~i~~ 181 (404)
T 1ysj_A 158 EI-AAGARKVLEAG-VLNGVSAIFGM 181 (404)
T ss_dssp TT-TCHHHHHHHTT-TTTTEEEEEEE
T ss_pred cc-chhHHHHHhcC-CCcCCCEEEEE
Confidence 99 78999999853 23456666665
No 52
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=98.85 E-value=8.2e-09 Score=114.40 Aligned_cols=140 Identities=18% Similarity=0.050 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceEEE
Q 004166 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVM 133 (770)
Q Consensus 54 era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi~ 133 (770)
+++.+..++|. + .+.-|.++.++++||.++|+++| ++++.+. .| ...|+++
T Consensus 16 ~~~~~~~~~l~-~---~pe~s~~E~~~~~~i~~~l~~~G------~~v~~~~---~g----------------~~~~via 66 (394)
T 3ram_A 16 YSYIEISHRIH-E---RPELGNEEIFASRTLIDRLKEHD------FEIETEI---AG----------------HATGFIA 66 (394)
T ss_dssp HHHHHHHHHHH-H---SCCCTTCCHHHHHHHHHHHHHTT------CEEEEEE---TT----------------EEEEEEE
T ss_pred HHHHHHHHHHH-h---CCCCCcchHHHHHHHHHHHHHcC------CeEEeCC---CC----------------CceEEEE
Confidence 45666777776 3 23456667799999999999998 4444431 11 1369999
Q ss_pred EEeCCCCCCCCCeEEEeecCCCCCC-CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCC-ccChH-HHHh
Q 004166 134 RISSTDSQDTDPSVLMNGHFDGPLS-SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELF-MLGAH-GFMK 210 (770)
Q Consensus 134 ~i~g~~~~~~~~~Vll~aH~Dsv~~-s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE~g-l~GS~-~fi~ 210 (770)
+++|.+ +.|.|++.+|+|+||. ..+.+.|. -.+++|.+++.|++.+.+++++|.|+|+.+||.| ..|++ .+++
T Consensus 67 ~~~g~~---~g~~i~l~ah~D~vpg~~ha~G~d~-~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~~~ 142 (394)
T 3ram_A 67 TYDSGL---DGPAIGFLAEYDALPGLGHACGHNI-IGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVK 142 (394)
T ss_dssp EEECSS---SSCEEEEEECCCCCTTTSSTTCHHH-HHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHHHH
T ss_pred EEeCCC---CCCEEEEEEecccCCCcceECCccH-HHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHHHH
Confidence 998853 3478999999999983 22233333 3467888999998765568899999999999998 58999 7776
Q ss_pred hccccCceeEEEEeccC
Q 004166 211 AHKWRDSVGAVINVEAS 227 (770)
Q Consensus 211 ~~~~~~~i~a~INlD~~ 227 (770)
+. ..+++++++.+|..
T Consensus 143 ~g-~~~~~d~~~~~h~~ 158 (394)
T 3ram_A 143 AG-VIDQIDIALMIHPG 158 (394)
T ss_dssp HT-GGGGCSEEECCEEE
T ss_pred cC-CcccCCEEEEECCc
Confidence 43 33568888888754
No 53
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=98.82 E-value=6.7e-08 Score=105.71 Aligned_cols=219 Identities=15% Similarity=0.127 Sum_probs=141.8
Q ss_pred HHHHHHHHHHhcCCCCCCChhHH-HHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceEEEE
Q 004166 56 AIQHVRVLADEIGDRQEGRPGLR-EAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMR 134 (770)
Q Consensus 56 a~~~l~~L~~~ig~R~~gS~~~e-~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi~~ 134 (770)
..+.+++|++. |.++| .++ ++++|+++++++++ .++++| +..|++++
T Consensus 11 ~~~~l~~L~~i--pspSG--~E~~~v~~~l~~~l~~~g------~~~~~D----------------------~~GNvi~~ 58 (354)
T 2vpu_A 11 DWKLMQEIIEA--PGVSG--YEHLGIRDIVVDVLKEVA------DEVKVD----------------------KLGNVIAH 58 (354)
T ss_dssp CHHHHHHHHHS--CCBTT--CGGGTHHHHHHHHHHTTC------SEEEEC----------------------TTCCEEEE
T ss_pred HHHHHHHHHhC--CCCCc--ccHHHHHHHHHHHHHHhC------CEEEEc----------------------CCCeEEEE
Confidence 46889999943 44454 445 78999999999987 344442 23599999
Q ss_pred EeCCCCCCCCCeEEEeecCCCCCC--------------------------------------------------------
Q 004166 135 ISSTDSQDTDPSVLMNGHFDGPLS-------------------------------------------------------- 158 (770)
Q Consensus 135 i~g~~~~~~~~~Vll~aH~Dsv~~-------------------------------------------------------- 158 (770)
++|++ +.|++.+|+|+++-
T Consensus 59 ~~g~~-----~~v~l~aHmDtVg~mV~~I~~~G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~Gvi~~~~~H~~~~~~~~ 133 (354)
T 2vpu_A 59 FKGSS-----PRIMVAAHMDKIGVMVNHIDKDGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQEDK 133 (354)
T ss_dssp ECCSS-----SEEEEECCCCBCEEEEEEECTTSCEEEEEESSCCGGGGTTCEEEEEETTEEEEEEECCCCSTTC------
T ss_pred EcCCC-----CEEEEEecccccceeEEEECCCCEEEEEccCCcccccccCCEEEEEcCCCcEEEEEcCCCccccCccccc
Confidence 98742 57999999999862
Q ss_pred ----------------------------------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEE
Q 004166 159 ----------------------------------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIF 192 (770)
Q Consensus 159 ----------------------------------------------s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~f 192 (770)
...+-||..||++++|+++.+++ ++.++.+
T Consensus 134 ~~~~~~~~l~iD~g~~s~ee~~~~GI~~Gd~v~~d~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~----~~~~v~~ 209 (354)
T 2vpu_A 134 GSKIDWDQIVVDVGASSKEEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYLDDRICLYAMIEAARQLGD----HEADIYI 209 (354)
T ss_dssp ---CCGGGCCEECSCSSHHHHHHTTCCTTCEEEECCCCEECSSSEEECTTHHHHHHHHHHHHHHHHCCC----CSSEEEE
T ss_pred ccCCCcceEEEEecCCCHHHHHhcCCCCCCEEEEeeEEEEeCCceEEEecCccHHHHHHHHHHHHHhhc----CCCeEEE
Confidence 23678999999999999998753 6789999
Q ss_pred EEeCcccCCccChHHHHhhccccCceeEEEEeccCCCCCCce------------EEeeCCC--CchhhHhhh---hccCc
Q 004166 193 LFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEASGTGGLDL------------VCQSGPS--SWPSSVYAQ---SAIYP 255 (770)
Q Consensus 193 lf~~~EE~gl~GS~~fi~~~~~~~~i~a~INlD~~G~gg~~~------------lfq~gp~--~~~~~~y~~---~~~~p 255 (770)
+|++.||.|+.|++.-.... .. ..+|.+|++-.+.+.. +...+.. +.+.+...+ ....|
T Consensus 210 ~ft~qEEVG~~ga~~aa~~i--~p--d~~i~~Dv~~a~dp~~~~~~~~~lg~Gpv~d~~~~~~~~l~~~l~~~a~~~gIp 285 (354)
T 2vpu_A 210 VGSVQEEVGLRGARVASYAI--NP--EVGIAMDVTFAKQPHDKGKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIP 285 (354)
T ss_dssp EECSCCTTTSHHHHHHHHHH--CC--SEEEEEEEEECCCTTSTTCCCCCTTSCCEEEESTTSCHHHHHHHHHHHHHTTCC
T ss_pred EEECCcccCccchhhhhccc--CC--CEEEEecccccCCCCcccccCceECCcceEcCCCCCCHHHHHHHHHHHHHcCCC
Confidence 99999999999988654422 12 2466777642222111 1221111 111121111 11112
Q ss_pred cccccccccCCCCCCCCchHHHhccCCCCcEEEEEEecCCccCcCcCcccCCCCHHHHHHHHHHHHHHHHHHhc
Q 004166 256 MAHSAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSN 329 (770)
Q Consensus 256 ~~~~l~~e~f~~ips~tD~~~F~~~~~gIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~ 329 (770)
+-.. . ...+++||-..+.....|+|..++..-. . ..||+. |.++.+.+++..+.+.++++.+..
T Consensus 286 ~q~~----~-~~g~gGtDa~~i~~a~~Gipt~~Igvp~-~-~~Hs~~---E~~~~~D~~~~~~ll~~~l~~l~~ 349 (354)
T 2vpu_A 286 LQVE----P-SPRPTGTDANVMQINKEGVATAVLSIPI-R-YMHSQV---ELADARDVDNTIKLAKALLEELKP 349 (354)
T ss_dssp CEEE----E-CCSCCSSTHHHHHTSTTCCEEEEEEEEE-B-STTSTT---CEEEHHHHHHHHHHHHHHHHHCCC
T ss_pred cEEE----e-CCCCCccHHHHHHHhcCCCCEEEECccc-c-cCcCcc---eEeeHHHHHHHHHHHHHHHHhccH
Confidence 2110 0 0112589988875323689999876432 2 378875 456688899999998888887744
No 54
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=98.69 E-value=9.5e-08 Score=107.51 Aligned_cols=158 Identities=18% Similarity=0.166 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeec-Cc-ccce-----------ec--c
Q 004166 54 ARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVN-GS-FNMI-----------FL--G 118 (770)
Q Consensus 54 era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~-g~-~~~~-----------~~--~ 118 (770)
++..+..++|- ..+.-+.++.++.+||.++|+++| ++++......+ +. ..++ .+ |
T Consensus 14 ~~~~~~~~~lh----~~Pe~~~~E~~t~~~i~~~L~~~G------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 83 (445)
T 3io1_A 14 PSMTQWRRDFH----LHAESGWLEFRTASKVADILDGLG------YQLALGRDVIDADSRMGLPDEETLARAFERAREQG 83 (445)
T ss_dssp HHHHHHHHHHH----HTCCCTTCCHHHHHHHHHHHHHTT------CEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHH----hCCCCCCcHHHHHHHHHHHHHHCC------CeEEecccccccccccccccchhhhhhhhhhcccc
Confidence 34555555555 234445666789999999999998 44433110000 00 0000 00 0
Q ss_pred -cccccc-c-cccceEEEEEeCCCCCCCCCeEEEeecCCCCCCC------------------CCC---CCChhHHHHHHH
Q 004166 119 -HSISLG-Y-RNHTNIVMRISSTDSQDTDPSVLMNGHFDGPLSS------------------PGA---GDCGSCVASMLE 174 (770)
Q Consensus 119 -~~~~~~-y-~~~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv~~s------------------~GA---~D~~sgva~~LE 174 (770)
.+.... . ....||+++++|.+ +.+.|++.+|+|++|.. +|. .+...++|++|+
T Consensus 84 ~~~~~~~~~~~~~~~vva~~~~~~---~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~ 160 (445)
T 3io1_A 84 APERWLPAFEGGFAGVVATLDTGR---PGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLG 160 (445)
T ss_dssp CCTTTGGGGTTTCCCEEEEEECSS---CCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHH
T ss_pred ccccccccccCCCCEEEEEEeCCC---CCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHH
Confidence 000000 0 13579999998753 34789999999999841 121 111246999999
Q ss_pred HHHHHHhcCCCCCCCEEEEEeCcccCCccChHHHHhhccccCceeEEEEecc
Q 004166 175 LARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAHKWRDSVGAVINVEA 226 (770)
Q Consensus 175 ~ar~l~~~~~~~~~~I~flf~~~EE~gl~GS~~fi~~~~~~~~i~a~INlD~ 226 (770)
+++.|++.+.+++.+|+|+|..+|| +..|++.++++. ..+++++++.++.
T Consensus 161 aa~~L~~~~~~~~g~v~l~f~p~EE-~~~Ga~~~i~~g-~~~~~d~~~~~h~ 210 (445)
T 3io1_A 161 LAHVLKQYAAQLNGVIKLIFQPAEE-GTRGARAMVAAG-VVDDVDYFTAIHI 210 (445)
T ss_dssp HHHHHHHTGGGCCSEEEEEEESCTT-TTCHHHHHHHTT-TTTTCSEEEEEEE
T ss_pred HHHHHHhCcCcCCceEEEEEecccc-ccchHHHHHHcC-CccccceeEEEec
Confidence 9999998777789999999999999 568999999853 3356788887764
No 55
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=98.45 E-value=1.4e-06 Score=94.74 Aligned_cols=212 Identities=18% Similarity=0.191 Sum_probs=131.9
Q ss_pred HHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceEEEEE
Q 004166 56 AIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRI 135 (770)
Q Consensus 56 a~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi~~i 135 (770)
+.+.+++|++. |.++| .++++++|+++++++++ .++++| +..||++++
T Consensus 13 ~~~~l~~L~~~--pspSG--~E~~v~~~i~~~l~~~~------~e~~~D----------------------~~Gnvi~~~ 60 (343)
T 3isx_A 13 MKELIRKLTEA--FGPSG--REEEVRSIILEELEGHI------DGHRID----------------------GLGNLIVWK 60 (343)
T ss_dssp CHHHHHHHHHS--CCBTT--CCHHHHHHHHHHHTTTC------SEEEEC----------------------TTCCEEEEE
T ss_pred HHHHHHHHHhC--CCCCC--chHHHHHHHHHHHHHhC------CEEEEC----------------------CCCCEEEEE
Confidence 46778999854 44444 45688999999999987 334432 346999988
Q ss_pred eCCCCCCCCCeEEEeecCCCCCC---------------------------------------------------------
Q 004166 136 SSTDSQDTDPSVLMNGHFDGPLS--------------------------------------------------------- 158 (770)
Q Consensus 136 ~g~~~~~~~~~Vll~aH~Dsv~~--------------------------------------------------------- 158 (770)
|. +.+.|++.||+|++.-
T Consensus 61 -g~----~~~~v~l~aHmDevG~mV~~I~~~G~l~~~~vGG~~~~~~~~~~v~i~t~~~Gvig~~~~H~~~~~~~~~~~~ 135 (343)
T 3isx_A 61 -GS----GEKKVILDAHIDEIGVVVTNVDDKGFLTIEPVGGVSPYMLLGKRIRFENGTIGVVGMEGETTEERQENVRKLS 135 (343)
T ss_dssp -CC----CSSEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCHHHHTTCEEEETTSCEEEEEECCCSHHHHHHHHHTCC
T ss_pred -CC----CCCEEEEEecccccceEEEEECCCCeEEEEecCCcCccccCCcEEEEeccEEEEEecccccccChhhcccCCC
Confidence 42 2467999999999752
Q ss_pred ---------------------------------------CCCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCccc
Q 004166 159 ---------------------------------------SPGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEE 199 (770)
Q Consensus 159 ---------------------------------------s~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE 199 (770)
...+-||..||++++|+++.++. ++++.++|+.-||
T Consensus 136 ~~~l~iD~g~~s~ee~~~~I~vGd~v~~~~~~~~~~~~i~s~~lDdR~g~~~~l~~l~~l~~-----~~~~~~~ft~qEE 210 (343)
T 3isx_A 136 FDKLFIDIGANSREEAQKMCPIGSFGVYDSGFVEVSGKYVSKAMDDRIGCAVIVEVFKRIKP-----AVTLYGVFSVQEE 210 (343)
T ss_dssp GGGEEEECSCSSHHHHHHHSCTTCEEEESCCCEEETTEEEESCHHHHHHHHHHHHHHHHCCC-----SSEEEEEEECCCC
T ss_pred cceEEEEeCCCCHHHHHhcCCCCCEEEecCceEEeccEEEeccCccHHHHHHHHHHHHhccC-----CCeEEEEEECCcc
Confidence 13578999999999999997742 6899999999999
Q ss_pred CCccChHHHHhhccccCceeEEEEeccCCCCC-CceE------EeeCCC-----------CchhhHhhh---hccCcccc
Q 004166 200 LFMLGAHGFMKAHKWRDSVGAVINVEASGTGG-LDLV------CQSGPS-----------SWPSSVYAQ---SAIYPMAH 258 (770)
Q Consensus 200 ~gl~GS~~fi~~~~~~~~i~a~INlD~~G~gg-~~~l------fq~gp~-----------~~~~~~y~~---~~~~p~~~ 258 (770)
.|+.|++.-.... .. ..+|.+|++-.+. +..- ...||- +.+.+...+ ...-|+-.
T Consensus 211 VG~~Ga~~aa~~i--~p--d~~i~vDv~~a~d~p~~~~~~~~~lg~GpvI~~~d~~~~~d~~l~~~l~~~A~~~gIp~Q~ 286 (343)
T 3isx_A 211 VGLVGASVAGYGV--PA--DEAIAIDVTDSADTPKAIKRHAMRLSGGPALKVKDRASISSKRILENLIEIAEKFDIKYQM 286 (343)
T ss_dssp TTSCCSTTTGGGC--CC--SEEEEEEEEECCCSTTCCCTTCCCTTSCCEEECBTTCCHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred cCchhHHHHhhcC--CC--CEEEEEeCcCCCCCCCcccccccccCCCcEEEEcCCCCCCCHHHHHHHHHHHHHCCCCeEE
Confidence 9999997544322 22 3467777653322 1100 000110 000111100 01111100
Q ss_pred ccccccCCCCCCCCchHHHhccCCCCcEEEEEEecCCccCcCcCcccCCCCHHHHHHHHHHHHHHH
Q 004166 259 SAAQDVFPVIPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVL 324 (770)
Q Consensus 259 ~l~~e~f~~ips~tD~~~F~~~~~gIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~ 324 (770)
+. ...++||-..+.....|+|..++..-. . ..||++. .++.+.+++..+.+.+++
T Consensus 287 ----~v--~~ggGTDa~~i~~a~~Gipt~~Igvp~-r-~~Hs~~E---~~~~~Di~~~~~ll~~~l 341 (343)
T 3isx_A 287 ----EV--LTFGGTNAMGYQRTREGIPSATVSIPT-R-YVHSPSE---MIAPDDVEATVDLLIRYL 341 (343)
T ss_dssp ----CC--CBCCCSSHHHHHHHTSSCCEEEEEEEE-B-STTSTTE---EECHHHHHHHHHHHHHHH
T ss_pred ----ec--CCCCchHHHHHHHhcCCCCEEEEcccc-c-cccchhh---EecHHHHHHHHHHHHHHH
Confidence 01 112689987764323699999886432 2 3788755 456777877777766655
No 56
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=98.23 E-value=4.1e-05 Score=80.15 Aligned_cols=58 Identities=12% Similarity=0.068 Sum_probs=43.6
Q ss_pred CCCCCchHHHhccCCCCcEEEEEEecCCccCcCcCcccCCCCHHHHHHHHHHHHHHHHHHhcC
Q 004166 268 IPGDTDYRIFSQDYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNS 330 (770)
Q Consensus 268 ips~tD~~~F~~~~~gIPgld~a~~~~~~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~a 330 (770)
.+++||-..|.....|+|.+.+.-- .. ..||+. |+++.+.+++..+.+.+++++|...
T Consensus 293 ~~ggTDa~~~~~~~~Giptv~~G~g-~~-~~Ht~~---E~v~i~dl~~~~~ll~~~i~~L~~~ 350 (354)
T 2wzn_A 293 RPTGTDANVMQINKEGVATAVLSIP-IR-YMHSQV---ELADARDVDNTIKLAKALLEELKPM 350 (354)
T ss_dssp SCCSSHHHHHHTSTTCCEEEEEEEE-EB-STTSTT---CEEEHHHHHHHHHHHHHHHHHCCCC
T ss_pred cccccHHHHHHHhcCCCCEEEECcc-cC-CCCccc---EEEEHHHHHHHHHHHHHHHHhCccc
Confidence 3568998876422269999987754 23 369976 6677899999999999999988653
No 57
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.07 E-value=0.018 Score=64.56 Aligned_cols=44 Identities=20% Similarity=0.194 Sum_probs=40.3
Q ss_pred cccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhccc
Q 004166 50 RFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKE 93 (770)
Q Consensus 50 ~Fs~era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~ 93 (770)
.++.+++++++++|++.+|+|..||++++++++|+.++|++.|.
T Consensus 17 ~~~~~~~~~~l~~l~~~~G~R~~GS~g~~~a~~~i~~~l~~~G~ 60 (444)
T 3iib_A 17 AQSSSLGYDIVESLTVEVGPRLAGSEQDKVAVDWAIAKLQSLGF 60 (444)
T ss_dssp HHHCCHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred HhcccHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHcCC
Confidence 34567899999999988999999999999999999999999984
No 58
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=92.88 E-value=0.12 Score=57.31 Aligned_cols=44 Identities=20% Similarity=0.300 Sum_probs=40.2
Q ss_pred cCcccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhccc
Q 004166 48 LDRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKE 93 (770)
Q Consensus 48 ~~~Fs~era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~ 93 (770)
...+++++++++++.|++. +|..||++++++++|+.++|+++|.
T Consensus 10 ~~~i~~~~~~~~l~~Ls~~--~R~~Gs~g~~~a~~yi~~~~~~~Gl 53 (421)
T 2ek8_A 10 TKRTDAENMYNTIQFLSQA--PRVAGSPEELKAVRYIEQQFKSYGY 53 (421)
T ss_dssp HTTCCHHHHHHHHHHHTTS--CCCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred HhhCCHHHHHHHHHHHhCC--CCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 3578999999999999944 9999999999999999999999984
No 59
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=84.27 E-value=0.95 Score=50.30 Aligned_cols=142 Identities=11% Similarity=0.004 Sum_probs=80.2
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccChHHHHhhc-cc-cCce-------------eEEEEe
Q 004166 160 PGAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGFMKAH-KW-RDSV-------------GAVINV 224 (770)
Q Consensus 160 ~GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE~gl~GS~~fi~~~-~~-~~~i-------------~a~INl 224 (770)
..+-||..||+++||+++.++ +.+.++.++| +-||.|..|++.-.... +. .+++ ..+|.+
T Consensus 231 s~~lDdr~~~~~~l~al~~~~----~~~~~v~~~f-d~EEVGs~ga~gA~s~~~~~~l~ri~~~~~~~~~~~~~s~~is~ 305 (428)
T 2ijz_A 231 GARLDNLLSCHAGLEALLNAE----GDENCILVCT-DHEEVGSCSHCGADGPFLEQVLRRLLPEGDAFSRAIQRSLLVSA 305 (428)
T ss_dssp CCCSSCSSTTTTTTTHHHHTT----SCSSSCEEEE-CBSCTTTTCHHHHSSCCTTTSCCSSSSSSSSSTTTTTSCCEEEE
T ss_pred eecCccHHHHHHHHHHHHhcc----cCCceEEEEE-eccccCccchhhhhccccHHHHHHhhhhhhHHHhhhhcCEEEEE
Confidence 467899999999999998764 3567888888 99999999998754322 10 1111 678888
Q ss_pred ccCCCCCCceE--E--------eeCCCCchhhHhhh--hccCcccc----ccccc------cCCC---CCCCCchHHHhc
Q 004166 225 EASGTGGLDLV--C--------QSGPSSWPSSVYAQ--SAIYPMAH----SAAQD------VFPV---IPGDTDYRIFSQ 279 (770)
Q Consensus 225 D~~G~gg~~~l--f--------q~gp~~~~~~~y~~--~~~~p~~~----~l~~e------~f~~---ips~tD~~~F~~ 279 (770)
|++-+..+..- . ..|| . ++.+.+ .+.++... .++++ .+-. .+++||-.++..
T Consensus 306 Dv~ha~~Pn~~~~~~~~~~~~lg~G~--v-Ik~~~~~~~~~~~~~~~~l~~~a~~~~Ip~Q~~~~~~d~~gGsd~g~i~~ 382 (428)
T 2ijz_A 306 DNAHGVHPNYADRHDANHGPALNGGP--V-IKINSNQRYATNSETAGFFRHLCQDSEVPVQSFVTRSDMGCGSTIGPITA 382 (428)
T ss_dssp CCCCCCCSSCGGGCCSSCCCSSSCCC--B-CCCCSSSCCSCCHHHHTTTTHHHHHTCCCCCBCCCCSSCCCCCCCSTTTG
T ss_pred ecccccCCCCcccccccCCcccCCCc--E-EEEECCCCCCCCHHHHHHHHHHHHHcCCCeEEEEEeCCCCccchHHHHHH
Confidence 87644322210 1 0111 1 111110 00111000 01110 1111 457788777643
Q ss_pred cCCCCcEEEEEEecCCccCcCcCcccCCCCHH
Q 004166 280 DYGDIPGLDIIFLIGGYYYHTSHDTVDRLLPG 311 (770)
Q Consensus 280 ~~~gIPgld~a~~~~~~~YHT~~Dt~d~id~~ 311 (770)
...|||.+|+..- -..-||+..+...-|..
T Consensus 383 ~~~Gi~tvdiGip--~~~mHS~~E~~~~~D~~ 412 (428)
T 2ijz_A 383 SQVGVRTVDIGLP--TFAMHSIRELAGSHDLA 412 (428)
T ss_dssp GGGSCCEEEECCC--CCSCSSSSCCCCSSHHH
T ss_pred hCCCCCEEEEchh--hcccchHHHHhhHHHHH
Confidence 2379999997532 12469988877766543
No 60
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=84.20 E-value=0.87 Score=53.82 Aligned_cols=43 Identities=14% Similarity=0.027 Sum_probs=39.2
Q ss_pred CcccHHHHHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHHhccc
Q 004166 49 DRFSEARAIQHVRVLADEIGDRQEGRPGLREAAVYIKTQLEGIKE 93 (770)
Q Consensus 49 ~~Fs~era~~~l~~L~~~ig~R~~gS~~~e~a~~yl~~~l~~ig~ 93 (770)
..+++++++++|++|++ .||..||+++.++++|+.+++++.|.
T Consensus 20 ~~~~~~~i~~~l~~lt~--~ph~aGt~~~~~~a~yi~~~~~~~Gl 62 (707)
T 3fed_A 20 SEMKAENIKSFLRSFTK--LPHLAGTEQNFLLAKKIQTQWKKFGL 62 (707)
T ss_dssp HHCCHHHHHHHHHHHSS--SCCCTTSHHHHHHHHHHHHHHHHHTC
T ss_pred HhCCHHHHHHHHHHHhc--CCCcCCCHhHHHHHHHHHHHHHHcCC
Confidence 46889999999999994 39999999999999999999999984
No 61
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=84.18 E-value=0.26 Score=57.60 Aligned_cols=45 Identities=16% Similarity=0.313 Sum_probs=39.7
Q ss_pred cccHHHHHHHHHHHHH-hcCCCCCCChhHHHHHHHHHHHHHhcccc
Q 004166 50 RFSEARAIQHVRVLAD-EIGDRQEGRPGLREAAVYIKTQLEGIKER 94 (770)
Q Consensus 50 ~Fs~era~~~l~~L~~-~ig~R~~gS~~~e~a~~yl~~~l~~ig~~ 94 (770)
.++++++++||+.|++ .+++|..||++++++++||.+++++.|.+
T Consensus 14 ~i~~~~i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~ 59 (640)
T 3kas_A 14 KLDSTDFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLS 59 (640)
T ss_dssp HHHTCCHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCS
T ss_pred hCCHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCc
Confidence 4567789999999994 26899999999999999999999999854
No 62
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=70.47 E-value=1.5 Score=49.27 Aligned_cols=43 Identities=21% Similarity=0.179 Sum_probs=37.0
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccChHH
Q 004166 161 GAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHG 207 (770)
Q Consensus 161 GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE~gl~GS~~ 207 (770)
++-||..||+++||+++.++ .+++++++++++-||.|..|++.
T Consensus 258 ~~lDdr~~~~~~l~al~~~~----~~~~~~~~~~~d~EEVGs~ga~g 300 (461)
T 2glj_A 258 YGQDDRICAYTSFEAMLEMK----NAKKTCITILVDKEEVGSIGATG 300 (461)
T ss_dssp TTHHHHHHHHHHHHHHHTCC----SCSSCEEEEEECCGGGTCCTTTT
T ss_pred ecchhHHHHHHHHHHHHhhc----cCCCeEEEEEEccCCCCCccccc
Confidence 57799999999999988653 46789999999999999988764
No 63
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=69.14 E-value=2 Score=47.98 Aligned_cols=41 Identities=22% Similarity=0.177 Sum_probs=35.8
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccChH
Q 004166 161 GAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAH 206 (770)
Q Consensus 161 GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE~gl~GS~ 206 (770)
++-||-.||.+++|+++.+ .++.++++++++-||.|..|++
T Consensus 246 ~~lDnr~~~~~~l~al~~~-----~~~~~~~~~~~d~EEVGs~ga~ 286 (450)
T 2glf_A 246 YGQDDRICAYTALRALLSA-----NPEKSIGVIFFDKEEIGSDGNT 286 (450)
T ss_dssp TTHHHHHHHHHHHHHHHHC-----CCSSCEEEEEESCGGGTSCSSS
T ss_pred ecchhhHHHHHHHHHHHhc-----CCCceEEEEEEcccccCCcchh
Confidence 5779999999999998865 3578999999999999988776
No 64
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=68.16 E-value=0.84 Score=51.20 Aligned_cols=45 Identities=24% Similarity=0.253 Sum_probs=32.0
Q ss_pred CCCCChhHHHHHHHHHHHHHhcCCCCCCCEEEEEeCcccCCccChHHH
Q 004166 161 GAGDCGSCVASMLELARLTIDSGWIPPRPIIFLFNGAEELFMLGAHGF 208 (770)
Q Consensus 161 GA~D~~sgva~~LE~ar~l~~~~~~~~~~I~flf~~~EE~gl~GS~~f 208 (770)
++-||..||+++||+++.+++ .+++++++++++-||.|..|++.-
T Consensus 252 ~~lDdr~~~~~~l~al~~~~~---~~~~~~~~~~~d~EEVGs~ga~ga 296 (458)
T 1y7e_A 252 YGQDDKICVFTSLESIFDLEE---TPNKTAICFLVDKEEIGSTGSTGL 296 (458)
T ss_dssp SSHHHHHHHHHHHHHHSSSSC---CCSSCEECCCBCSTTC--------
T ss_pred ecCccHHHHHHHHHHHHhhhc---cCCceEEEEEEcccccCcccchhh
Confidence 577999999999999886542 477899999999999999888743
No 65
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=57.74 E-value=5.4 Score=44.25 Aligned_cols=73 Identities=18% Similarity=0.174 Sum_probs=41.7
Q ss_pred CChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceEEEEEeCCCCCCCCCeEEEeec
Q 004166 73 GRPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNGH 152 (770)
Q Consensus 73 gS~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~Vll~aH 152 (770)
.|+..-.+++++.+++++.|.+.-++ .+...-.+.+.|.. .+...|+++...|++-...++.++++||
T Consensus 14 ~~~t~~h~v~~~~~~l~~~Gf~~l~e--~~~w~l~~g~k~~~----------~~~~g~lia~~~G~~~~~~~~~~ii~AH 81 (428)
T 2ijz_A 14 ASPTPFHATASLARRLEAAGYRRLDE--RDAWHTETGGRYYV----------TRNDSSLIAIRLGRRSPLESGFRLVGAH 81 (428)
T ss_dssp TTHHHHHHHCCSHHHHHHHHHHHSCC----------CCCCEE----------CTTTTCCEEEECC--CCSTTCCEEEECB
T ss_pred cCCCHHHHHHHHHHHHHHcCCeEccc--ccccccCCCCEEEE----------ECCCCEEEEEEECCcCCCCCCcEEEEEc
Confidence 45666689999999999988643221 11111112222211 1233799999888641112468999999
Q ss_pred CCCCC
Q 004166 153 FDGPL 157 (770)
Q Consensus 153 ~Dsv~ 157 (770)
.|+..
T Consensus 82 ~Dspg 86 (428)
T 2ijz_A 82 TDSPC 86 (428)
T ss_dssp CCCSE
T ss_pred CCcCC
Confidence 99964
No 66
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=45.71 E-value=5.9 Score=44.68 Aligned_cols=47 Identities=15% Similarity=-0.026 Sum_probs=34.6
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcC----CCCCCCEEEEEeCcccCCccChHH
Q 004166 160 PGAGDCGSCVASMLELARLTIDSG----WIPPRPIIFLFNGAEELFMLGAHG 207 (770)
Q Consensus 160 ~GA~D~~sgva~~LE~ar~l~~~~----~~~~~~I~flf~~~EE~gl~GS~~ 207 (770)
.++-||-.||.+++|+++.+.+.. ..+ ...++++++-||.|..|++.
T Consensus 281 s~~lDnr~~~~~~leaL~~~~~~~~~~~~~~-~~~v~v~~dqEEVGs~ga~g 331 (496)
T 3vat_A 281 APRLDNLHSCFCALQALIDSCSAPASLAADP-HVRMIALYDNEEVGSESAQG 331 (496)
T ss_dssp ETTHHHHHHHHHHHHHHHHHTTSHHHHHHCC-SEEEEEEESCGGGTSCSSSS
T ss_pred eeccccHHHHHHHHHHHHhhhccccccccCC-CcEEEEEEccCCcCCCcchh
Confidence 367799999999999998775310 012 34449999999999877664
No 67
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=43.16 E-value=19 Score=40.01 Aligned_cols=65 Identities=18% Similarity=0.074 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceEEEEEeCCCCCCCCCeEEEeecCCCC
Q 004166 77 LREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHFDGP 156 (770)
Q Consensus 77 ~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~Vll~aH~Dsv 156 (770)
.-.+++++.+++++-|.+.-++. +.-.+.+.|.. .++..|+++...|+.. .++.++++||.|++
T Consensus 33 ~~h~v~~~~~~l~~~Gf~~l~e~----~~l~~g~k~~~----------~r~~~~lia~~~g~~~--~~g~~ii~AH~Dsp 96 (450)
T 2glf_A 33 ERMTVKEIKRILDESGFVPLEDF----AGDPMNMTVYA----------VNRGKAIAAFRVVDDL--KRGLNLVVAHIDSP 96 (450)
T ss_dssp HHHHHHHHHHHHHTTTCEETTSC----CSCTTSBCEEE----------ESSSSCEEEEEBCSCG--GGCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHCcCEEcccc----cCCCCCCEEEE----------EcCCCEEEEEEeCCCC--CCCeEEEEEecccC
Confidence 35789999999999886432211 11111222211 1223699999887521 23679999999995
Q ss_pred C
Q 004166 157 L 157 (770)
Q Consensus 157 ~ 157 (770)
.
T Consensus 97 ~ 97 (450)
T 2glf_A 97 R 97 (450)
T ss_dssp E
T ss_pred C
Confidence 3
No 68
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=33.17 E-value=81 Score=26.05 Aligned_cols=59 Identities=19% Similarity=0.247 Sum_probs=44.3
Q ss_pred CCCCCCchHHHhccCCCCcEEEEEEecCC-ccCcCcCcccCCCCHHHHHHHHHHHHHHHHHHhcC
Q 004166 267 VIPGDTDYRIFSQDYGDIPGLDIIFLIGG-YYYHTSHDTVDRLLPGSVQARGDNLFNVLKAFSNS 330 (770)
Q Consensus 267 ~ips~tD~~~F~~~~~gIPgld~a~~~~~-~~YHT~~Dt~d~id~~~lq~~g~~~l~l~~~la~a 330 (770)
..++.||-+.|.+ .|+|.+.+.-.... ..-|+.. |+++.+.+.+..+....+++.+.+.
T Consensus 22 ~~~g~TDar~~~~--~gip~v~fGPg~~~~~~~H~~d---E~v~i~~l~~~~~iy~~~i~~~~~~ 81 (88)
T 1q7l_B 22 IMPAAGDNRYIRA--VGVPALGFSPMNRTPVLLHDHD---ERLHEAVFLRGVDIYTRLLPALASV 81 (88)
T ss_dssp ECCSCSHHHHHHH--TTCCEEEECCCCSCCCCTTSTT---CEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred eeceeCcHHHHHH--cCCCEEEECCCCCCcccccCCC---CeeEHHHHHHHHHHHHHHHHHHHcC
Confidence 3568899999975 69998876543321 2456664 5677899999999999999999875
No 69
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=21.00 E-value=37 Score=37.83 Aligned_cols=64 Identities=14% Similarity=0.153 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceEEEEEe-CCCCCCCCCeEEEeecCCCC
Q 004166 78 REAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRIS-STDSQDTDPSVLMNGHFDGP 156 (770)
Q Consensus 78 e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi~~i~-g~~~~~~~~~Vll~aH~Dsv 156 (770)
-.+++++.+++++.|.+.-++.+ .-.+.+.|. ..+..|.++.+. |+++.+ +..-+++||.|+.
T Consensus 36 ~hav~~~~~~l~~~Gf~~l~e~~----~l~~g~~~~-----------~~r~g~~i~a~~~G~~~~~-~g~~ii~AH~Dsp 99 (458)
T 1y7e_A 36 REVTAYALDKAKKLGFINAEEKK----NLMPGDKIF-----------YTCREKSVAFAIIGKNPIE-DGMNFIVSHTDSP 99 (458)
T ss_dssp HHHHHHHHHHHHTTTCEESTTCC----CCCTTCEEE-----------CBCSSSCBCCEECCSSCGG-GCCEECCCBCCCC
T ss_pred HHHHHHHHHHHHHcCCccccccc----ccCCCCeEE-----------EECCCCEEEEEEeCCCCCC-CCcEEEEEccCcC
Confidence 48999999999999854322110 011112111 122346666655 653211 2245999999995
Q ss_pred C
Q 004166 157 L 157 (770)
Q Consensus 157 ~ 157 (770)
.
T Consensus 100 g 100 (458)
T 1y7e_A 100 R 100 (458)
T ss_dssp B
T ss_pred C
Confidence 3
No 70
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=20.89 E-value=69 Score=36.03 Aligned_cols=71 Identities=15% Similarity=0.071 Sum_probs=38.8
Q ss_pred ChhHHHHHHHHHHHHHhcccccCCceeEEEEEeeecCcccceeccccccccccccceEEEEEeCCCCCCCCCeEEEeecC
Q 004166 74 RPGLREAAVYIKTQLEGIKERAGPKFRIEIEENVVNGSFNMIFLGHSISLGYRNHTNIVMRISSTDSQDTDPSVLMNGHF 153 (770)
Q Consensus 74 S~~~e~a~~yl~~~l~~ig~~~~~~~~vev~~~~~~g~~~~~~~~~~~~~~y~~~~NVi~~i~g~~~~~~~~~Vll~aH~ 153 (770)
|+..-.+++++.+++++-|.+.-++- +-+.-.+.|.|. ..++...+|+-.-|.+....+..-+++||.
T Consensus 49 spT~~hav~~~~~~L~~aGF~~L~e~--~~w~l~~ggkyy----------v~rn~ssliAf~vg~~~~~~~G~~ivgaHt 116 (496)
T 3vat_A 49 SPSPFHAVAECRSRLLQAGFHELKET--ESWDIKPESKYF----------LTRNSSTIIAFAVGGQYVPGNGFSLIGAHT 116 (496)
T ss_dssp CSSHHHHHHHHHHHHHHTTCEECCTT--SCCCCCTTCEEE----------EEETTTEEEEEEECTTCCTTCCEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHCcCeEcccc--CCcccCCCCEEE----------EECCCcEEEEEEeCCCCCCCCCeEEEEEec
Confidence 34445889999999999885321100 000011222221 114455777654443322235688999999
Q ss_pred CCC
Q 004166 154 DGP 156 (770)
Q Consensus 154 Dsv 156 (770)
||.
T Consensus 117 DSP 119 (496)
T 3vat_A 117 DSP 119 (496)
T ss_dssp CCC
T ss_pred cCC
Confidence 994
No 71
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=20.50 E-value=57 Score=21.68 Aligned_cols=18 Identities=33% Similarity=0.298 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHhhhhchH
Q 004166 594 VVAAAVGAVTGWCVGPLL 611 (770)
Q Consensus 594 iia~~~~~~~~~~~~~l~ 611 (770)
+||.++++.+++.+||-+
T Consensus 8 viaglvalltflafgfwl 25 (32)
T 2lx0_A 8 VIAGLVALLTFLAFGFWL 25 (32)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 577888999988888753
Done!