Query 004173
Match_columns 770
No_of_seqs 335 out of 1346
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 16:36:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004173.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004173hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hhm_A Phosphatidylinositol-4, 100.0 5E-134 2E-138 1209.3 49.2 657 10-768 349-1088(1091)
2 2y3a_A Phosphatidylinositol-4, 100.0 1E-131 4E-136 1197.4 51.6 648 9-769 346-1090(1092)
3 2wxf_A Phosphatidylinositol-4, 100.0 9E-131 3E-135 1180.5 57.4 641 9-769 210-938 (940)
4 1e7u_A Phosphatidylinositol 3- 100.0 7E-128 2E-132 1156.1 62.7 643 11-768 213-953 (961)
5 3ls8_A Phosphatidylinositol 3- 100.0 7E-124 2E-128 1072.3 44.4 498 264-763 3-614 (614)
6 2x6h_A GH13170P, VPS34, phosph 100.0 1E-121 4E-126 1068.8 47.6 519 250-770 2-695 (696)
7 3b7y_A E3 ubiquitin-protein li 96.6 0.014 4.7E-07 55.0 11.7 105 7-129 9-113 (153)
8 1rsy_A Synaptotagmin I; calciu 96.6 0.012 4E-07 55.7 10.5 74 52-129 62-135 (152)
9 3rdl_A Protein kinase C alpha 96.6 0.019 6.6E-07 52.7 11.8 76 52-130 36-111 (137)
10 3n5a_A Synaptotagmin-7; calciu 96.5 0.014 4.9E-07 53.5 10.8 76 52-129 36-111 (138)
11 1w15_A Synaptotagmin IV; metal 96.5 0.013 4.3E-07 55.3 10.4 76 52-129 50-125 (153)
12 2b3r_A Phosphatidylinositol-4- 96.5 0.016 5.4E-07 53.7 10.5 76 52-129 39-115 (134)
13 1tjx_A Similar to synaptotagmi 96.5 0.021 7E-07 54.3 11.6 76 52-129 45-120 (159)
14 1a25_A CALB, protein kinase C 96.4 0.025 8.4E-07 53.1 11.7 75 52-129 51-125 (149)
15 3f04_A Synaptotagmin-1; C2A, c 96.3 0.018 6.2E-07 53.5 10.3 74 52-129 54-127 (143)
16 1ugk_A Synaptotagmin IV, KIAA1 96.2 0.042 1.4E-06 50.7 12.1 86 52-145 43-129 (138)
17 1wfm_A Synaptotagmin XIII; C2 96.2 0.014 4.8E-07 54.3 8.4 76 52-130 43-118 (138)
18 2cm5_A Rabphilin-3A; protein t 96.1 0.033 1.1E-06 53.3 11.2 76 52-129 57-132 (166)
19 3fbk_A RGS3, RGP3, regulator o 96.1 0.036 1.2E-06 52.3 11.2 75 52-129 46-121 (153)
20 2chd_A Rabphilin-3A, exophilin 96.1 0.024 8.4E-07 52.6 9.8 76 52-129 49-125 (142)
21 2dmh_A Myoferlin; beta-sandwic 96.0 0.031 1E-06 51.7 10.1 72 52-129 26-97 (140)
22 3l4c_A Dedicator of cytokinesi 96.0 0.033 1.1E-06 56.5 10.9 66 80-146 87-157 (220)
23 3fdw_A Synaptotagmin-like prot 96.0 0.035 1.2E-06 52.0 10.5 77 52-130 44-120 (148)
24 2bwq_A Regulating synaptic mem 96.0 0.043 1.5E-06 49.8 10.8 76 52-129 38-116 (129)
25 2d8k_A Synaptotagmin VII; exoc 95.9 0.04 1.4E-06 51.1 10.4 74 52-129 46-120 (141)
26 2enp_A B/K protein; C2 type 1, 95.9 0.023 7.7E-07 53.2 8.7 75 52-130 53-127 (147)
27 2z0u_A WW domain-containing pr 95.9 0.018 6.1E-07 55.1 7.9 78 51-130 62-140 (155)
28 3m7f_B E3 ubiquitin-protein li 95.8 0.052 1.8E-06 52.5 10.8 75 52-130 28-102 (176)
29 2r83_A Synaptotagmin-1; C2A-C2 95.6 0.063 2.2E-06 55.6 11.2 76 52-129 170-245 (284)
30 1gmi_A Protein kinase C, epsil 95.5 0.041 1.4E-06 50.8 8.6 81 52-145 37-117 (136)
31 2dmg_A KIAA1228 protein; beta- 95.5 0.059 2E-06 49.9 9.6 75 53-129 44-120 (142)
32 2ep6_A MCTP2 protein; beta san 95.5 0.056 1.9E-06 49.6 9.3 69 52-130 33-101 (133)
33 2q3x_A Regulating synaptic mem 95.4 0.039 1.3E-06 53.3 8.3 74 52-130 51-125 (171)
34 1rh8_A Piccolo protein; beta-s 95.3 0.024 8.1E-07 52.6 6.4 77 52-129 38-123 (142)
35 1v27_A Regulating synaptic mem 95.3 0.055 1.9E-06 49.8 8.8 76 52-129 41-119 (141)
36 3kwu_A MUNC13-1; calcium bindi 95.0 0.17 5.8E-06 47.1 11.2 69 52-130 37-116 (148)
37 2fk9_A Protein kinase C, ETA t 95.0 0.057 1.9E-06 52.0 8.0 68 52-129 59-126 (157)
38 1djx_A PLC-D1, phosphoinositid 94.7 0.17 5.9E-06 59.0 12.7 85 51-143 518-603 (624)
39 2nq3_A Itchy homolog E3 ubiqui 94.7 0.15 5.2E-06 49.5 10.3 66 53-129 57-122 (173)
40 1rlw_A Phospholipase A2, CALB 94.7 0.12 4E-06 46.6 9.0 78 52-140 26-103 (126)
41 1dqv_A Synaptotagmin III; beta 94.5 0.039 1.3E-06 58.0 6.1 76 52-129 172-247 (296)
42 2r83_A Synaptotagmin-1; C2A-C2 94.5 0.2 6.9E-06 51.8 11.5 74 52-129 39-112 (284)
43 1wfj_A Putative elicitor-respo 94.5 0.067 2.3E-06 49.0 7.0 68 52-129 30-98 (136)
44 2cjt_A UNC-13 homolog A, MUNC1 94.3 0.09 3.1E-06 48.6 7.4 65 52-129 22-87 (131)
45 3pyc_A E3 ubiquitin-protein li 93.7 0.36 1.2E-05 44.0 10.1 84 52-144 25-111 (132)
46 1dqv_A Synaptotagmin III; beta 93.4 0.38 1.3E-05 50.3 11.1 74 52-129 40-114 (296)
47 2cjs_A UNC-13 homolog A, MUNC1 93.3 0.17 5.7E-06 49.0 7.5 66 52-130 31-97 (167)
48 2qzq_A Axin interactor, dorsal 92.1 0.64 2.2E-05 44.4 9.4 107 16-145 14-124 (152)
49 3qr0_A Phospholipase C-beta (P 91.3 0.79 2.7E-05 55.1 11.4 81 53-144 667-751 (816)
50 3ohm_B 1-phosphatidylinositol- 90.9 0.95 3.3E-05 54.8 11.5 82 52-144 741-825 (885)
51 2zkm_X 1-phosphatidylinositol- 90.5 1.2 4.1E-05 53.5 12.0 81 52-144 694-779 (799)
52 3jzy_A Intersectin 2; C2 domai 89.7 1.4 4.7E-05 49.4 11.1 69 52-129 407-475 (510)
53 3nsj_A Perforin-1; pore formin 89.2 1.3 4.4E-05 50.8 10.3 84 52-143 413-500 (540)
54 3l9b_A Otoferlin; C2-domain, b 88.9 1.9 6.5E-05 40.8 9.5 70 53-129 37-107 (144)
55 3pfq_A PKC-B, PKC-beta, protei 78.0 3.9 0.00013 47.9 8.1 74 52-128 192-265 (674)
56 1cjy_A CPLA2, protein (cytosol 73.1 3.6 0.00012 48.9 6.0 71 52-129 41-111 (749)
57 3bxj_A RAS GTPase-activating p 52.4 3.5 0.00012 46.4 0.6 67 54-129 28-101 (483)
58 3ltj_A Alpharep-4; protein eng 44.2 34 0.0012 32.2 6.2 75 322-401 74-149 (201)
59 3ltm_A Alpha-REP4; protein eng 34.5 41 0.0014 32.0 5.0 73 323-400 49-122 (211)
60 3ltm_A Alpha-REP4; protein eng 31.0 74 0.0025 30.1 6.2 74 322-400 79-153 (211)
61 3ltj_A Alpharep-4; protein eng 30.2 52 0.0018 30.9 4.9 75 323-402 44-119 (201)
62 2do9_A NALP10, nacht-, LRR- an 25.0 27 0.00091 31.6 1.6 76 289-391 17-92 (115)
No 1
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=100.00 E-value=5.2e-134 Score=1209.26 Aligned_cols=657 Identities=26% Similarity=0.426 Sum_probs=550.7
Q ss_pred eeCCCCCCeEEEEEeecCCCCCCCCCCCcCCCCCCCCCCcCCCCceEEEEEEEeCCcccccceeeccccCCCCccccccE
Q 004173 10 LSCDINLPVKFRVDRLEGTLPSIKSPNSVNDRSGISSTTEERRPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPI 89 (770)
Q Consensus 10 ~s~dl~~~~~~ki~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl 89 (770)
..-|++.+++|+|.+..+-.. +....+++||+|+|||||++||.|++|+++++++.. |||||
T Consensus 349 slw~~~~~f~v~i~~~~~~n~-----------------~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~~~~~~-Wne~l 410 (1091)
T 3hhm_A 349 SLWVINSALRIKILCATYVNV-----------------NIRDIDKIYVRTGIYHGGEPLCDNVNTQRVPCSNPR-WNEWL 410 (1091)
T ss_dssp EGGGCCSEEEEEEEEESCCCC-----------------CCSSCCCCCEEEEEESSSCSSCCEECCCCCCTTSCE-EEEEE
T ss_pred chhhCCCCEEEEEEEecCCCC-----------------CccccceEEEEEEEEECCEEccCceeccccCCCCCC-CCeeE
Confidence 346889999999999877421 112357899999999999999999999999987666 99999
Q ss_pred EecccccCcCccCceEEEEEeecCC----CCceeEeEEEEeeecccccccccceeEEeecCCCCCCCCCCCCCCCCCCCc
Q 004173 90 TLSTKYRDLTAHSQLALTVWDVSCG----KDERLVGGTTILLFNSKMQLKTGKQKLRLWPGKEADGSLPTSTPGKVPKNE 165 (770)
Q Consensus 90 ~fpi~~~dLP~~a~L~~ti~~~~~~----~~~~~vG~~~~~LFd~~~~Lr~G~~~L~lwp~~~~d~~~~~~~p~~~~~~~ 165 (770)
+|||+|+||||+|+||||||++..+ ++..++||+|++|||++|.|++|.+.|++||. +|+...
T Consensus 411 ~f~i~i~dLPr~arL~~tl~~~~~~~~~~~~~~~lg~~n~~lfd~~~~L~~G~~~L~lW~~--~~~~~~----------- 477 (1091)
T 3hhm_A 411 NYDIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLWPV--PHGLED----------- 477 (1091)
T ss_dssp EEEEEGGGCCTTCEEEEEECCCCCCC-------CCEEEEEESBCTTCBBCCEEEEEECEEC--CTTCCC-----------
T ss_pred EecCccccCChhcEEEEEEEEecCccCcccccceeEEeeeeeEccCCeEEcCCeEEEeecC--Ccchhh-----------
Confidence 9999999999999999999998764 24579999999999999999999999999983 222110
Q ss_pred hhhHHHHHHHHhhhhcccccccchhhhhhHHHHHHHHhhhhccCCCCceEEEEEeCCCCceeEeecCCCCCCCCCCccCC
Q 004173 166 RGELERLEKLINKYEREQIQRVDWLDRLTFKALEKIKEQENFRNGNSYLYLVVDFGRLEHRVVFQDSGANFLLPAPITST 245 (770)
Q Consensus 166 ~~~~~rle~l~~~~~~G~~~~~~wlD~l~~~~i~~~~~~~~~~~~~~~~~L~iefp~f~~~vv~~~~~~~~~~~~~~~~~ 245 (770)
++ ++.|...+++ .. +.+.+.|+|+.|++||+|++.+. ...
T Consensus 478 ---------~~--~p~g~~~~np--------------------~~-~~~~~~l~~~~~~~~v~fp~~~~-------~~~- 517 (1091)
T 3hhm_A 478 ---------LL--NPIGVTGSNP--------------------NK-ETPCLELEFDWFSSVVKFPDMSV-------IEE- 517 (1091)
T ss_dssp ---------SC--CTTSCCSCCS--------------------CS-SSCEEEEEECCCSSCEECCCHHH-------HHH-
T ss_pred ---------hc--CcccccCCCC--------------------CC-CCccEEEEEEcCCCCeEeCCcch-------hhh-
Confidence 11 1234444322 11 12355666666777999987420 000
Q ss_pred CcceeecCCCCCCCCcchHHHHHHHhhhccCCcccCCCCChHHHHHHHHHHcCCCCCCCCHHHHHHHHHhHHHhhhchhh
Q 004173 246 NELVIVWDPEVGKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRA 325 (770)
Q Consensus 246 ~~~~~~~d~e~~~~n~~e~k~~~l~rs~~~~~~d~~lkp~~~~~~~L~~i~~~~p~~~Lt~~ek~llW~~R~~l~~~~~a 325 (770)
......|+|.+..++ ++++ ++..++++||+.+++++|+.|+++||++.||++||++||+||+|+.++|+|
T Consensus 518 -~~~~~~~~e~~~~~~----~~~l-----~~~~~~~~k~~~~~~~~L~~i~~~~p~~~Lt~~ek~llW~~R~~l~~~p~a 587 (1091)
T 3hhm_A 518 -HANWSVSREAGFSYS----HAGL-----SNRLARDNELRENDKEQLKAISTRDPLSEITEQEKDFLWSHRHYCVTIPEI 587 (1091)
T ss_dssp -HHHHHHHHHTTSCSC----CSSS-----CCC-------CCCGGGGGGTTSSSCTTSCCCHHHHHHHHHTHHHHTTSGGG
T ss_pred -hhhhccccccccccc----cccc-----ccccccccccChHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHhccChhH
Confidence 000011223222222 0000 256678999999999999999999999999999999999999999999999
Q ss_pred HhhhhccccCCCHHHHHHHHHHhcccCCCCHhhhhhccCCCCCCHHHHHHHHHHH-hcCChhHHHHhHHHHHHHhhccCC
Q 004173 326 LTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCIL-ERADDDELQCYLLQLVQALRFERS 404 (770)
Q Consensus 326 L~k~L~sv~W~~~~e~~~a~~LL~~W~~i~~~dALeLL~~~f~~~~VR~yAV~~L-~~~~d~eL~~yLlQLVQaLkyE~~ 404 (770)
|||||+||+|+++.|++||++||..|++++|+|||||||+.|+|+.||+|||++| ++++||+|++||||||||||||++
T Consensus 588 L~k~L~sV~W~~~~e~~e~~~LL~~W~~i~~~~ALeLL~~~f~d~~VR~yAV~~L~~~~~ddeLl~YLlQLVQALKyE~~ 667 (1091)
T 3hhm_A 588 LPKLLLSVKWNSRDEVAQMYCLVKDWPPIKPEQAMELLDCNYPDPMVRGFAVRCLEKYLTDDKLSQYLIQLVQVLKYEQY 667 (1091)
T ss_dssp HHHHHTTSCTTCHHHHHHHHHHHHTCCCCCHHHHHHTTSTTCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHGGGGCSS
T ss_pred HHHHheeCCCCCHHHHHHHHHHHhcCCCCCHHHHHHhCcccCCCHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred CchHHHHHHHHHhhhchhhHHHHHHHHHHHccCchhhhhhHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHHHH
Q 004173 405 DKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTPGVDGEDGYKLWQSLVRQTELTAQL 484 (770)
Q Consensus 405 ~~s~La~fLi~rA~~n~~i~~~l~W~L~~e~~d~~~~~r~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~Q~~~~~~L 484 (770)
++|+||+|||+||++|++|||+|||||++|++++....|| ..+++++++. + + ..++.+.+|++|+++|
T Consensus 668 ~ds~La~FLl~RAl~n~~igh~lfW~L~~E~~~~~~~~r~----~~lLe~~~~~---~-~----~~~~~l~rQ~~~~~~L 735 (1091)
T 3hhm_A 668 LDNLLVRFLLKKALTNQRIGHFFFWHLKSEMHNKTVSQRF----GLLLESYCRA---C-G----MYLKHLNRQVEAMEKL 735 (1091)
T ss_dssp SSCHHHHHHHHHHTTCHHHHHHHHHHHHTTTTCTTTHHHH----HHHHHHHHHH---S-C----THHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHhhCHHHHHHHHHHeeecccCchHHHHH----HHHHHHHHhh---C-H----HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998866554 6677777752 2 2 3567899999999999
Q ss_pred HHHHHHhccC-CC-ChhHHHHHHHHHHHhhhhhcccCCCCcccCCCCcEEEEEEecCcceecccCcceeEEEEEeCC--C
Q 004173 485 CSIMRDVGNV-RG-NTQKKIEKLRQLLSGLLSELTYFEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTAS--G 560 (770)
Q Consensus 485 ~~i~~~vk~~-~~-~~~~k~e~L~~~L~~~~~~l~~~~~~~~lPldP~~~i~~i~~~~~~v~~S~~~P~~l~f~~~d--g 560 (770)
.+|++.||.. ++ ++++|++.|++.|++... ... .+++++|+||++.|.+|.+++|+||+|+++|++|+|++.| |
T Consensus 736 ~~is~~ik~~~~~~~~~~k~~~L~~~L~~~~~-~~~-~~~~~lPl~P~~~I~~i~~~~~~V~~S~~~P~~L~f~g~D~~G 813 (1091)
T 3hhm_A 736 INLTDILKQEKKDETQKVQMKFLVEQMRRPDF-MDA-LQGFLSPLNPAHQLGNLRLEECRIMSSAKRPLWLNWENPDIMS 813 (1091)
T ss_dssp HHHHHHTTSTTCCSCHHHHHHHHHHHHHSHHH-HHH-SSSEEETTEEEEEECSBCGGGCEECCSSSCCEEEEECCCSTTS
T ss_pred HHHHHHHhhhccccchHHHHHHHHHHHhccch-hhc-ccCCCCCCCcceEEEEEeeceEEEeecccCcEEEEEecCCCCC
Confidence 9999999976 33 555668899999976421 111 2589999999999999999999999999999999999998 7
Q ss_pred CeE----EEEEeeCcchhHHHHHHHHHHHHHHHHHhcCCCceeeeeEEEEecCCCCccceec-cccHHHHHhcc------
Q 004173 561 GTC----KMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-SRSLAQILSEH------ 629 (770)
Q Consensus 561 ~~~----~~IfK~GDDLRQD~lvlQli~lmd~i~~~~~ldl~l~~Y~Vl~t~~~~GlIE~V~-s~tl~~I~~~~------ 629 (770)
+.| .+|||+|||||||++++|+|++||+||+++++|++++||+|+|||+++|+||||+ +.|+++|+++.
T Consensus 814 ~~y~~~~~~i~K~gDDLRQD~~v~Qli~lmn~il~~~~~dL~l~~Y~Vip~s~~~GlIE~V~ns~Tl~~I~~~~~~~~~~ 893 (1091)
T 3hhm_A 814 ELLFQNNEIIFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDCVGLIEVVRNSHTIMQIQCKGGLKGAL 893 (1091)
T ss_dssp TTTSCCEEEEEEESSCCHHHHHHHHHHHHHHHHHHTTTCCCCCCCCCEEEEETTEEEEECCSSEEEHHHHHHSCTTTCTT
T ss_pred ccccccceEEEEcCcchhHHHHHHHHHHHHHHHHHhCCCCceEeeeeEEEccCCCcceeecCCchhHHHHHHhhCccccc
Confidence 788 9999999999999999999999999999999999999999999999999999999 89999999874
Q ss_pred ----CcHHHHHHhhCCCCCCCCcccHHHHhhhhccchhhhhhhheecccC------------------------------
Q 004173 630 ----RSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGD------------------------------ 675 (770)
Q Consensus 630 ----~~l~~~l~~~~~~~~~~~~~~~~a~~nFi~S~AgysV~tYiLGIGD------------------------------ 675 (770)
+.|.+||++++++ .++ .+|++||++|||||||+||||||||
T Consensus 894 ~f~~~~L~~~f~~~~~~--~~~---~~ar~nF~~S~A~ysvv~YiLgigDRH~~NILid~tG~v~HIDFG~~f~~~~~~~ 968 (1091)
T 3hhm_A 894 QFNSHTLHQWLKDKNKG--EIY---DAAIDLFTRSCAGYCVATFILGIGDRHNSNIMVKDDGQLFHIDFGHFLDHKKKKF 968 (1091)
T ss_dssp CCCTTHHHHHHHTTSCT--TSH---HHHHHHHHHHHHHHHHHHHHHTCCCCCTTTEEEETTSCEEECCCCCCSCC-----
T ss_pred ccCchHHHHHHHhcCCh--HHH---HHHHHHHHHHhhhhhheEEEEeecCCCCcceEEeCCCCEEEEeehhhhccCCccC
Confidence 3689999999833 344 5899999999999999999999999
Q ss_pred ----------------------------chhhhhhHHHHHHHHHHHHcChhhHHHHHHHhccCCCCCCCCCchhHHHHHH
Q 004173 676 ----------------------------SQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQ 727 (770)
Q Consensus 676 ----------------------------s~~~~~F~~~c~~af~~LRk~~~lil~L~~lm~~s~ip~~~~~~d~~i~~l~ 727 (770)
|+.|+.|+.+|+.||++||+|+++|++||++|+++||||++..+ ++.+++
T Consensus 969 ~~~~E~vPFrLT~~mv~vmg~G~~~~e~s~~fg~Fr~~c~~a~~~LR~~~~~il~LlelM~~s~lp~~~~~~--~i~~lr 1046 (1091)
T 3hhm_A 969 GYKRERVPFVLTQDFLIVISKGAQECTKTREFERFQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQSFD--DIAYIR 1046 (1091)
T ss_dssp -------CCCCCHHHHHHSSCSSSCCSSSHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHGGGSCCTTCSSHH--HHHHHH
T ss_pred CCCcCCCCceeHHHHHHHHhcCCCCcccchhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCccCchH--HHHHHH
Confidence 12478999999999999999999999999999999999999754 688999
Q ss_pred HHcCCCCCHHHHHHHHHHHHHHHh-hChhhHHHHHHHHHHhh
Q 004173 728 EKFRLDLDDEACVHFFQDLINESV-SALFPQMVETIHRWAQY 768 (770)
Q Consensus 728 ~rl~l~lse~eA~~~f~~lI~~S~-~s~~t~~~d~~H~~aq~ 768 (770)
+||++++||+||.+||+++|++|+ ++|.|++++++|++||+
T Consensus 1047 ~rf~l~lseeeA~~~f~~~i~~s~~~~~~t~~n~~~H~~a~~ 1088 (1091)
T 3hhm_A 1047 KTLALDKTEQEALEYFMKQMNDARHGGWTTKMDWIFHTIKQH 1088 (1091)
T ss_dssp HHSCCSSCHHHHHHHHHHHHHHCCCCCCCSSSCSSSCCC---
T ss_pred HHhCCCCCHHHHHHHHHHHHHHHHhcCceeehhHHHHHhhcc
Confidence 999999999999999999999999 57999999999999985
No 2
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=100.00 E-value=1e-131 Score=1197.37 Aligned_cols=648 Identities=26% Similarity=0.415 Sum_probs=559.2
Q ss_pred EeeCCCCCCeEEEEEeecCCCCCCCCCCCcCCCCCCCCCCcCCCCceEEEEEEEeCCcccccceeeccccCCCCcccccc
Q 004173 9 FLSCDINLPVKFRVDRLEGTLPSIKSPNSVNDRSGISSTTEERRPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEP 88 (770)
Q Consensus 9 ~~s~dl~~~~~~ki~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnew 88 (770)
..+-|++.+++|+|.++.+- |.+..+++||+|+|||||++||.|++|++++|.+.+.||||
T Consensus 346 ~s~~~~~~~f~i~i~~~~~~-------------------~~~~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnew 406 (1092)
T 2y3a_A 346 SHIWDNNNPFQITLVKGNKL-------------------NTEETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQ 406 (1092)
T ss_dssp --CCCCCSEEEEEECCCCCC-------------------CCCSSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEE
T ss_pred eehhhcCCCEEEEEEEeccC-------------------CCCCCceEEEEEEEEECCEEccCceecccccCCCCCcccee
Confidence 45678999999999987663 22346889999999999999999999999999999999999
Q ss_pred EEecccccCcCccCceEEEEEeec----CC------------------CCceeEeEEEEeeecccccccccceeEEeecC
Q 004173 89 ITLSTKYRDLTAHSQLALTVWDVS----CG------------------KDERLVGGTTILLFNSKMQLKTGKQKLRLWPG 146 (770)
Q Consensus 89 l~fpi~~~dLP~~a~L~~ti~~~~----~~------------------~~~~~vG~~~~~LFd~~~~Lr~G~~~L~lwp~ 146 (770)
|+|||+|+||||+|+||||||++. ++ +...++||+|++|||++|.|++|.+.|++||.
T Consensus 407 l~f~i~~~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~lw~~ 486 (1092)
T 2y3a_A 407 LEFDINICDLPRMARLCFAVYAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFKGQLRSGDVILHSWSS 486 (1092)
T ss_dssp EEEEEESSSCCTTCEEEEECCCC------------------------------CCEEEEESBCTTCBBCCEEEECCCCTT
T ss_pred EEeCCccccCChhcEEEEEEEEecCccccccccccccccccccccccccccceeEEEeeeeECCcCcccCCCeEEEEeeC
Confidence 999999999999999999999984 21 12459999999999999999999999999997
Q ss_pred CCCCCCCCCCCCCCCCCCchhhHHHHHHHHhhhhcccccccchhhhhhHHHHHHHHhhhhccCCCCceEEEEEeCCCCc-
Q 004173 147 KEADGSLPTSTPGKVPKNERGELERLEKLINKYEREQIQRVDWLDRLTFKALEKIKEQENFRNGNSYLYLVVDFGRLEH- 225 (770)
Q Consensus 147 ~~~d~~~~~~~p~~~~~~~~~~~~rle~l~~~~~~G~~~~~~wlD~l~~~~i~~~~~~~~~~~~~~~~~L~iefp~f~~- 225 (770)
.++ +.....+|+ |.... ++..+++++|.||||.|++
T Consensus 487 ~~~-~~~~~~~p~----------------------g~~~~--------------------~~~~~~~~~L~ief~~~~~~ 523 (1092)
T 2y3a_A 487 FPD-ELEEMLNPM----------------------GTVQT--------------------NPYAENATALHITFPENKKQ 523 (1092)
T ss_dssp CCC-SCCSSSCCS----------------------SCSSC--------------------CSCCTTSCCCEEEECCCSSS
T ss_pred Ccc-cccccCCCC----------------------cccCC--------------------CCCCCCceEEEEEecccCCC
Confidence 665 555555554 11111 1112346899999999999
Q ss_pred eeEeecCCCCCCCCCCccCCCcceeecCCCCCCCCcchHHHHHHHhhhccCCcccCCCCChHHHHHHHHHHcCCCCCCCC
Q 004173 226 RVVFQDSGANFLLPAPITSTNELVIVWDPEVGKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLS 305 (770)
Q Consensus 226 ~vv~~~~~~~~~~~~~~~~~~~~~~~~d~e~~~~n~~e~k~~~l~rs~~~~~~d~~lkp~~~~~~~L~~i~~~~p~~~Lt 305 (770)
||+|++. +++|+|++++.|+ +..|+++||+++++++|+.|+++||++.||
T Consensus 524 ~V~~~~~---------------------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~L~~i~~~~p~~~L~ 573 (1092)
T 2y3a_A 524 PCYYPPF---------------------------DKIIEKAAELASG---DSANVSSRGGKKFLAVLKEILDRDPLSQLC 573 (1092)
T ss_dssp CCBCCCT---------------------------THHHHHHHHHC--------------CTTHHHHHHTTTTSCTTSCCC
T ss_pred eEEecCc---------------------------chhhhhHHHhccC---CccccccCCCHHHHHHHHHHHhcCCCCCCC
Confidence 6999874 3578999988754 778899999999999999999999999999
Q ss_pred HHHHHHHHHhHHHhhhc-hhhHhhhhccccCCCHHHHHHHHHHhcccCCCCHhhhhhccCCCCCCHHHHHHHHHHHhcCC
Q 004173 306 GDEKQLLWKFRFSLMSE-KRALTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCILERAD 384 (770)
Q Consensus 306 ~~ek~llW~~R~~l~~~-~~aL~k~L~sv~W~~~~e~~~a~~LL~~W~~i~~~dALeLL~~~f~~~~VR~yAV~~L~~~~ 384 (770)
++||++||+||+||.++ |+||||||+||+|+++.+++||++||..|++++|++||||||+.|+|+.||+|||++|++++
T Consensus 574 ~~ek~llW~~R~~~~~~~p~aL~k~l~sv~w~~~~e~~e~~~lL~~W~~i~p~~ALeLL~~~f~d~~VR~yAV~~L~~~~ 653 (1092)
T 2y3a_A 574 ENEMDLIWTLRQDCRENFPQSLPKLLLSIKWNKLEDVAQLQALLQIWPKLPPREALELLDFNYPDQYVREYAVGCLRQMS 653 (1092)
T ss_dssp HHHHHHHHHTHHHHHHHCGGGHHHHHHHSCTTCHHHHHHHHHHHHTSCCCCHHHHGGGGSTTCCCTTHHHHHHHHHHSSC
T ss_pred HHHHHHHHHhHHHHHhcCcHHHHHHHhhcCCCCHHHHHHHHHHHccCCCCCHHHHHHhcCccCCCHHHHHHHHHHHHcCC
Confidence 99999999999999985 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHhHHHHHHHhhccCCCchHHHHHHHHHhhhchhhHHHHHHHHHHHccCchhhhhhHHHHHHHHHHHHhhCCCCCC
Q 004173 385 DDELQCYLLQLVQALRFERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTPGVDG 464 (770)
Q Consensus 385 d~eL~~yLlQLVQaLkyE~~~~s~La~fLi~rA~~n~~i~~~l~W~L~~e~~d~~~~~r~~~~~~~l~~~~~~~l~~~~~ 464 (770)
||+|++||||||||||||++++|+|++|||+||++|++|||+|||+|++|++++....| |..+++++.+.. +
T Consensus 654 d~~l~~yLpQLVQaLkyE~~~~s~L~~fLl~ra~~n~~i~h~l~W~L~~e~~~~~~~~r----~~~lle~~~~~~----~ 725 (1092)
T 2y3a_A 654 DEELSQYLLQLVQVLKYEPFLDCALSRFLLERALDNRRIGQFLFWHLRSEVHTPAVSVQ----FGVILEAYCRGS----V 725 (1092)
T ss_dssp HHHHHHHHHHHHHHHHHCSSSSCHHHHHHHHHHTSCSSHHHHHHHHHHHHHTSHHHHHH----HHHHHHHHHHHT----T
T ss_pred HHHHHHHHHHHHHHHhcccccccHHHHHHHHHHhhChHHHHHHHHHeeecccCchHHHH----HHHHHHHHHhhc----H
Confidence 99999999999999999999999999999999999999999999999999999876555 456777777532 1
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhccC--CCChhHHHHHHHHHHHhhhhhcccCCCCcccCCCCcEEEEEEecCcce
Q 004173 465 EDGYKLWQSLVRQTELTAQLCSIMRDVGNV--RGNTQKKIEKLRQLLSGLLSELTYFEEPIRSPLAPNILITGIVPSESS 542 (770)
Q Consensus 465 ~~~~~~~~~l~~Q~~~~~~L~~i~~~vk~~--~~~~~~k~e~L~~~L~~~~~~l~~~~~~~~lPldP~~~i~~i~~~~~~ 542 (770)
..++.+.+|.+|+++|.+|++.||.. +++++++.+.|++.|++... ...+ +++++|++|++.|.+|.+++|+
T Consensus 726 ----~~~~~l~~Q~~~~~~L~~is~~ik~~~~~~~r~k~~e~L~~~l~~~~~-~~~~-~~~~lP~~P~v~I~~~~~~~~~ 799 (1092)
T 2y3a_A 726 ----GHMKVLSKQVEALNKLKTLNSLIKLNAVKLSRAKGKEAMHTCLKQSAY-REAL-SDLQSPLNPCVILSELYVEKCK 799 (1092)
T ss_dssp ----TTHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHSTTH-HHHT-SSSCCSSCSSBCCCCCCGGGCE
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHhhccch-hhcC-CCCCCCCCCceEEEEEecCceE
Confidence 24568999999999999999999953 34566778889988875321 1122 5899999999999999999999
Q ss_pred ecccCcceeEEEEEeCC--CCeEEEEEeeCcchhHHHHHHHHHHHHHHHHHhcCCCceeeeeEEEEecCCCCccceec-c
Q 004173 543 IFKSALHPLRLTFRTAS--GGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-S 619 (770)
Q Consensus 543 v~~S~~~P~~l~f~~~d--g~~~~~IfK~GDDLRQD~lvlQli~lmd~i~~~~~ldl~l~~Y~Vl~t~~~~GlIE~V~-s 619 (770)
||+|+++|++|+|+++| |+.|.+|||+|||||||++++|+|++||.+|+++++|++++||+|+|||+++|+||||+ +
T Consensus 800 V~~S~~~P~rL~~~gsD~~G~~y~~L~K~gDDLRQD~rv~Ql~~lmn~ll~~~~~~L~i~~Y~Vipls~~~GLIE~V~ns 879 (1092)
T 2y3a_A 800 YMDSKMKPLWLVYSSRAFGEDSVGVIFKNGDDLRQDMLTLQMLRLMDLLWKEAGLDLRMLPYGCLATGDRSGLIEVVSTS 879 (1092)
T ss_dssp ECSSTTCCEEEEEECTTTSSSEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCEECCSSSCCEEECCTTC
T ss_pred EeccccCceEEEEEecCCCCceeeEEEecCcccchhHHHHHHHHHHHHHHHhCCCCeEEecceEEEecCCCCeEeeCCCC
Confidence 99999999999999999 99999999999999999999999999999999999999999999999999999999999 9
Q ss_pred ccHHHHHhcc-----------CcHHHHHHhhCCCCCCCCcccHHHHhhhhccchhhhhhhheecccC-------------
Q 004173 620 RSLAQILSEH-----------RSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGD------------- 675 (770)
Q Consensus 620 ~tl~~I~~~~-----------~~l~~~l~~~~~~~~~~~~~~~~a~~nFi~S~AgysV~tYiLGIGD------------- 675 (770)
.|+++|+++. +.+.+||++++++ .++ .++++||++|||||||+||||||||
T Consensus 880 ~TL~~I~~~~~~~~~~~~f~~~~L~~~~~~~~~~--~~~---~~ar~nF~~SlA~ySvv~YILGlGDRH~~NILid~tG~ 954 (1092)
T 2y3a_A 880 ETIADIQLNSSNVAATAAFNKDALLNWLKEYNSG--DDL---DRAIEEFTLSCAGYCVASYVLGIGDRHSDNIMVKKTGQ 954 (1092)
T ss_dssp CBHHHHHSSSCTTTTTSCSSTTHHHHHHHHHCCT--HHH---HHHHHHHHHHHHHHHHHHHHTTCCCCCTTTEEECTTSC
T ss_pred ccHHHHHHhhccchhhhccCchHHHHHHHHhCCH--HHH---HHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEecCCC
Confidence 9999999753 3589999999854 344 5789999999999999999999999
Q ss_pred -------------------------------------------chhhhhhHHHHHHHHHHHHcChhhHHHHHHHhccCCC
Q 004173 676 -------------------------------------------SQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSNI 712 (770)
Q Consensus 676 -------------------------------------------s~~~~~F~~~c~~af~~LRk~~~lil~L~~lm~~s~i 712 (770)
++.|+.|+.+|+.||.+||+|++.|++++++|+++|+
T Consensus 955 v~HIDFG~~f~~~~~~l~~~pE~VPFRLT~~mv~~mg~g~~~~s~~fg~Fr~~c~~a~~~LR~~~~~Il~ll~lml~~~L 1034 (1092)
T 2y3a_A 955 LFHIDFGHILGNFKSKFGIKRERVPFILTYDFIHVIQQGKTGNTEKFGRFRQCCEDAYLILRRHGNLFITLFALMLTAGL 1034 (1092)
T ss_dssp EEECCCSCCSSCCCCGGGCCCCCCCCCCCHHHHHHHHTTCSSCSSSTTHHHHHHHHHHHHHHHTHHHHHHHHHHTSTTCC
T ss_pred EEEEeehhhhhcCCccCCCCCCCCCccCCHHHHHHHccCCCCCCcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCC
Confidence 2346899999999999999999999999999999999
Q ss_pred CCCCCCchhHHHHHHHHcCCCCCHHHHHHHHHHHHHHHh-hChhhHHHHHHHHHHhhc
Q 004173 713 PDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESV-SALFPQMVETIHRWAQYW 769 (770)
Q Consensus 713 p~~~~~~d~~i~~l~~rl~l~lse~eA~~~f~~lI~~S~-~s~~t~~~d~~H~~aq~~ 769 (770)
|||+..+ ++.++++||++++||+||.++|+++|++|+ ++|.|++++++|++||+=
T Consensus 1035 p~~~~~~--~i~~lr~rf~l~~seeeA~~~~~~~I~~s~~~~~~t~~n~~~H~~~~~~ 1090 (1092)
T 2y3a_A 1035 PELTSVK--DIQYLKDSLALGKSEEEALKQFKQKFDEALRESWTTKVNWMAHTVRKDY 1090 (1092)
T ss_dssp SSCSSHH--HHHHHHHHTTCSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHSCC-----
T ss_pred ccccchh--HHHHHHHhhCCCCCHHHHHHHHHHHHHHHHhcCceeehhHHHHHhcccC
Confidence 9999754 578999999999999999999999999999 679999999999999974
No 3
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=100.00 E-value=9.3e-131 Score=1180.49 Aligned_cols=641 Identities=27% Similarity=0.447 Sum_probs=530.1
Q ss_pred EeeCCCCCCeEEEEEeecCCCCCCCCCCCcCCCCCCCCCCcCCCCceEEEEEEEeCCcccccceeeccccCCCCcccccc
Q 004173 9 FLSCDINLPVKFRVDRLEGTLPSIKSPNSVNDRSGISSTTEERRPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEP 88 (770)
Q Consensus 9 ~~s~dl~~~~~~ki~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnew 88 (770)
..+.|++.+++|+|.++.+-. .+..+++||+|+|||||++||.|++|++++|.+.+.||||
T Consensus 210 ~s~~~~~~~f~i~i~~~~~~~-------------------~~~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~ 270 (940)
T 2wxf_A 210 VSLWSLEQPFSIELIEGRKVN-------------------ADERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQR 270 (940)
T ss_dssp --CTTCCSEEEEEEEEEECCC-------------------C---CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEE
T ss_pred eehhhcCCceEEEEEEecccC-------------------CCCCceEEEEEEEEECCEEccCceecccccCCCCcccceE
Confidence 456799999999999998742 2245899999999999999999999999999999999999
Q ss_pred EEecccccCcCccCceEEEEEeecCC--C----------CceeEeEEEEeeecccccccccceeEEeecCCCCCCCCCCC
Q 004173 89 ITLSTKYRDLTAHSQLALTVWDVSCG--K----------DERLVGGTTILLFNSKMQLKTGKQKLRLWPGKEADGSLPTS 156 (770)
Q Consensus 89 l~fpi~~~dLP~~a~L~~ti~~~~~~--~----------~~~~vG~~~~~LFd~~~~Lr~G~~~L~lwp~~~~d~~~~~~ 156 (770)
|+|||+|+||||+|+||||||++.++ + +..++||+|++|||++|.|++|.+.|++||..++ +.....
T Consensus 271 l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~lw~~~~~-~~~~~~ 349 (940)
T 2wxf_A 271 LEFDISVCDLPRMARLCFALYAVVEKAKKARSTKKKSKKADCPIAWANLMLFDYKDQLKTGERCLYMWPSVPD-EKGELL 349 (940)
T ss_dssp EEEEEEGGGCCTTCEEEEEEEEEC----------------CEEEEEEEEESBCTTSBBCCEEEEEECEECC-------CC
T ss_pred EEcccccccCCcccEEEEEEEEecCCccCccccccccccccceEEEEeeeEECCcCccccCCEEEEEeeCCcc-cccccC
Confidence 99999999999999999999998543 1 3579999999999999999999999999997665 444445
Q ss_pred CCCCCCCCchhhHHHHHHHHhhhhcccccccchhhhhhHHHHHHHHhhhhccCCCCceEEEEEeCCCCc-eeEeecCCCC
Q 004173 157 TPGKVPKNERGELERLEKLINKYEREQIQRVDWLDRLTFKALEKIKEQENFRNGNSYLYLVVDFGRLEH-RVVFQDSGAN 235 (770)
Q Consensus 157 ~p~~~~~~~~~~~~rle~l~~~~~~G~~~~~~wlD~l~~~~i~~~~~~~~~~~~~~~~~L~iefp~f~~-~vv~~~~~~~ 235 (770)
+|+ |.... ++..++++.|.||||.|++ ||+|++.+
T Consensus 350 ~p~----------------------g~~~~--------------------~~~~~~~~~L~ief~~~~~~pV~~~~~~-- 385 (940)
T 2wxf_A 350 NPA----------------------GTVRG--------------------NPNTESAAALVIYLPEVAPHPVYFPALE-- 385 (940)
T ss_dssp CTT----------------------SCSSC--------------------CSCTTTSCEEEEEECCCCC--CBCCCHH--
T ss_pred CCC----------------------cccCC--------------------CCCCCCceEEEEEecccCCCcEEcCCcc--
Confidence 554 11111 1112346899999999999 79998641
Q ss_pred CCCCCCccCCCcceeecCCCCCCCCcchHHHHHHHhhhccCCcccCCCCChHHHHHHHHHHcCCCCCCCCHHHHHHHHHh
Q 004173 236 FLLPAPITSTNELVIVWDPEVGKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLWKF 315 (770)
Q Consensus 236 ~~~~~~~~~~~~~~~~~d~e~~~~n~~e~k~~~l~rs~~~~~~d~~lkp~~~~~~~L~~i~~~~p~~~Lt~~ek~llW~~ 315 (770)
...+++.|.|++++. ++++++|+.|+++||++.||++||++||+|
T Consensus 386 --------------------~~~~~~~~~~~~~l~---------------~~~~~~l~~i~~~~p~~~L~~~ek~llW~~ 430 (940)
T 2wxf_A 386 --------------------KILELGRHGERGRIT---------------EEEQLQLREILERRGSGELYEHEKDLVWKM 430 (940)
T ss_dssp --------------------HHHHC-------------------------------CHHHHCC----CCCHHHHHHHHHT
T ss_pred --------------------hhhhcccccccccCC---------------HHHHHHHHHHHccCCcccCCHHHHHHHHHH
Confidence 011355566766553 468899999999999999999999999999
Q ss_pred HHHhhhc-hhhHhhhhccccCCCHHHHHHHHHHhcccCCCCHhhhhhccCCCCCCHHHHHHHHHHHhcCChhHHHHhHHH
Q 004173 316 RFSLMSE-KRALTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQ 394 (770)
Q Consensus 316 R~~l~~~-~~aL~k~L~sv~W~~~~e~~~a~~LL~~W~~i~~~dALeLL~~~f~~~~VR~yAV~~L~~~~d~eL~~yLlQ 394 (770)
|+||.++ |+||||||+||+|+++.+++||++||..|++++|++||||||++|+|+.||+|||++|++++||+|++||||
T Consensus 431 R~~~~~~~p~aL~~~l~sv~w~~~~~~~~~~~ll~~W~~~~~~~ALeLL~~~f~d~~Vr~yAv~~L~~~~d~~l~~yL~Q 510 (940)
T 2wxf_A 431 RHEVQEHFPEALARLLLVTKWNKHEDVAQMLYLLCSWPELPVLSALELLDFSFPDCYVGSFAIKSLRKLTDDELFQYLLQ 510 (940)
T ss_dssp HHHHHHHCGGGHHHHHTTSCTTCHHHHHHHHHHHHTCCCCCHHHHHHHTSTTCCCHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHhcCchHHHHHHhccCCCCHHHHHHHHHHHccCCCCCHHHHHHhcCCcCCCHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999885 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCchHHHHHHHHHhhhchhhHHHHHHHHHHHccCchhhhhhHHHHHHHHHHHHhhCCCCCCCcchHHHHHH
Q 004173 395 LVQALRFERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTPGVDGEDGYKLWQSL 474 (770)
Q Consensus 395 LVQaLkyE~~~~s~La~fLi~rA~~n~~i~~~l~W~L~~e~~d~~~~~r~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l 474 (770)
||||||||++++|+|++|||+||+.|++|||+|||+|++|++++....| |..++++++... + ..++.+
T Consensus 511 LVQaLkyE~~~~s~L~~fLl~ra~~n~~i~h~l~W~l~~e~~~~~~~~r----~~~ile~~~~~~----~----~~~~~l 578 (940)
T 2wxf_A 511 LVQVLKYESYLDCELTKFLLGRALANRKIGHFLFWHLRSEMHVPSVALR----FGLIMEAYCRGS----T----HHMKVL 578 (940)
T ss_dssp HHHHGGGCSSSSCHHHHHHHHHHHHCHHHHHHHHHHHHTTTTCHHHHHH----HHHHHHHHHHHC----H----HHHHHH
T ss_pred HHHHHhhccccccHHHHHHHHHHHhChHHHHHHHHHheecccCchHHHH----HHHHHHHHHhhc----H----HHHHHH
Confidence 9999999999999999999999999999999999999999999876555 466777777521 1 456789
Q ss_pred HHHHHHHHHHHHHHHHhccC--CCChhHHHHHHHHHHHhhhhhcccCCCCcccCCCCcEEEEEEecCcceecccCcceeE
Q 004173 475 VRQTELTAQLCSIMRDVGNV--RGNTQKKIEKLRQLLSGLLSELTYFEEPIRSPLAPNILITGIVPSESSIFKSALHPLR 552 (770)
Q Consensus 475 ~~Q~~~~~~L~~i~~~vk~~--~~~~~~k~e~L~~~L~~~~~~l~~~~~~~~lPldP~~~i~~i~~~~~~v~~S~~~P~~ 552 (770)
.+|.+|+++|.+|+..||.. +++++++.+.|++.|++... ...+ +++++|++|++.|.+|.+++|+||+|+++|++
T Consensus 579 ~~q~~~~~~L~~i~~~ik~~~~~~~r~k~~~~L~~~l~~~~~-~~~~-~~~~lP~~P~~~I~~~~~~~~~V~~S~~~P~~ 656 (940)
T 2wxf_A 579 MKQGEALSKLKALNDFVKVSSQKTTKPQTKEMMHMCMRQETY-MEAL-SHLQSPLDPSTLLEEVCVEQCTFMDSKMKPLW 656 (940)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHTSHHH-HHHH-SSEEETTEEEEEECEECGGGCEECSSTTCCEE
T ss_pred HHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHHHhccch-hhcc-CCCCCCCCCceeEEEeccCceEEcccccCCeE
Confidence 99999999999999999953 45567778889988865321 1112 48999999999999999999999999999999
Q ss_pred EEEEeCC---CCeEEEEEeeCcchhHHHHHHHHHHHHHHHHHhcCCCceeeeeEEEEecCCCCccceec-cccHHHHHhc
Q 004173 553 LTFRTAS---GGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-SRSLAQILSE 628 (770)
Q Consensus 553 l~f~~~d---g~~~~~IfK~GDDLRQD~lvlQli~lmd~i~~~~~ldl~l~~Y~Vl~t~~~~GlIE~V~-s~tl~~I~~~ 628 (770)
|+|+++| |+.|.+|||+|||||||++++|+|++||.||+++++|++++||+|+|||+++||||||+ +.|+++|+++
T Consensus 657 l~~~gsD~~~G~~~~~i~K~gDDLRqD~rv~Ql~~lmn~il~~~~~~L~i~~Y~Vipls~~~GlIE~V~ns~tl~~I~~~ 736 (940)
T 2wxf_A 657 IMYSSEEAGSAGNVGIIFKNGDDLRQDMLTLQMIQLMDVLWKQEGLDLRMTPYGCLPTGDRTGLIEVVLHSDTIANIQLN 736 (940)
T ss_dssp EEEECTTTGGGGCEEEEEEESSCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCEEEEETTEEEEECCSSEEEHHHHHTC
T ss_pred EEEEecCcCCCcceeEEEecCcccchhHHHHHHHHHHHHHHHhCCCCeEEEeeeEEEecCCCCeEeECCCCccHHHHHHh
Confidence 9999999 99999999999999999999999999999999999999999999999999999999999 9999999985
Q ss_pred c-----------CcHHHHHHhhCCCCCCCCcccHHHHhhhhccchhhhhhhheecccC----------------------
Q 004173 629 H-----------RSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGD---------------------- 675 (770)
Q Consensus 629 ~-----------~~l~~~l~~~~~~~~~~~~~~~~a~~nFi~S~AgysV~tYiLGIGD---------------------- 675 (770)
. +.+.+||++++++ .++ .++++||++|||||||+||||||||
T Consensus 737 ~~~~~~~~~f~~~~l~~~~~~~~~~--~~~---~~a~~~F~~S~A~~Svv~YILGlgDRH~~NILid~tG~v~HIDFG~~ 811 (940)
T 2wxf_A 737 KSNMAATAAFNKDALLNWLKSKNPG--EAL---DRAIEEFTLSCAGYCVATYVLGIGDRHSDNIMIRESGQLFHIDFGHF 811 (940)
T ss_dssp CSSSTTCCSSGGGHHHHHHHHHSCT--THH---HHHHHHHHHHHHHHHHHHHHHTCCCCCGGGEEEETTSCEEECCCCCC
T ss_pred hccchhhhccCchhHHHHHHHhCCH--HHH---HHHHHHHHHHHHHHHHHHHHhccCCCCcccEEEecCCCEEEEeehhh
Confidence 3 2589999999954 344 5789999999999999999999999
Q ss_pred ----------------------------------chhhhhhHHHHHHHHHHHHcChhhHHHHHHHhccCCCCCCCCCchh
Q 004173 676 ----------------------------------SQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEK 721 (770)
Q Consensus 676 ----------------------------------s~~~~~F~~~c~~af~~LRk~~~lil~L~~lm~~s~ip~~~~~~d~ 721 (770)
++.|+.|+.+|+.||.+||+|++.|++++++|+++|+|||+..+
T Consensus 812 f~~~~~~l~~~pE~VPFRLT~~mv~~mg~g~~~~s~~~g~Fr~~c~~~~~~LR~~~~~ll~ll~lml~~~lp~~~~~~-- 889 (940)
T 2wxf_A 812 LGNFKTKFGINRERVPFILTYDFVHVIQQGKTNNSEKFERFRGYCERAYTILRRHGLLFLHLFALMRAAGLPELSCSK-- 889 (940)
T ss_dssp TTCC---------CCCCCCCHHHHHHHTTTCSCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHGGGCCTTSCSHH--
T ss_pred hcccccccCCCCCCCCccCCHHHHHHHcCCCCCCCcchhhHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCCcccCchH--
Confidence 12468999999999999999999999999999999999999754
Q ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHHHHh-hChhhHHHHHHHHHHhhc
Q 004173 722 GILKLQEKFRLDLDDEACVHFFQDLINESV-SALFPQMVETIHRWAQYW 769 (770)
Q Consensus 722 ~i~~l~~rl~l~lse~eA~~~f~~lI~~S~-~s~~t~~~d~~H~~aq~~ 769 (770)
++.++++||++++||+||.++|+++|++|+ ++|.|++++++|++||+=
T Consensus 890 ~i~~l~~r~~l~~se~ea~~~~~~~i~~s~~~~~~t~~n~~~H~~~~~~ 938 (940)
T 2wxf_A 890 DIQYLKDSLALGKTEEEALKHFRVKFNEALRESWKTKVNWLAHNVSKDN 938 (940)
T ss_dssp HHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHCC---------------
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcCceeehhHHHHHhcccc
Confidence 578999999999999999999999999999 689999999999999974
No 4
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=100.00 E-value=6.8e-128 Score=1156.13 Aligned_cols=643 Identities=26% Similarity=0.465 Sum_probs=551.7
Q ss_pred eCCCCCCeEEEEEeecCCCCCCCCCCCcCCCCCCCCCCcCCCCceEEEEEEEeCCcccccceeeccccCCCCccccccEE
Q 004173 11 SCDINLPVKFRVDRLEGTLPSIKSPNSVNDRSGISSTTEERRPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPIT 90 (770)
Q Consensus 11 s~dl~~~~~~ki~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~ 90 (770)
+-|++.+++|+|.+++. +.+ +....+++||+|+|||||++||.+ .|++++|.+.+.|||||+
T Consensus 213 lw~~~~~f~i~i~~~~~--~~~---------------~~~~~~~~~V~~~l~~G~~~l~~~-~t~~~~~~~~~~Wne~l~ 274 (961)
T 1e7u_A 213 LWDCDRKFRVKIRGIDI--PVL---------------PRTADLTVFVEANIQYGQQVLCQR-RTSPKPFTEEVLWNVWLE 274 (961)
T ss_dssp CSCCCSEEEEEEEEEEC--SSC---------------CTTSCEEEEEEEEEEETTEEEEEE-ECCCEECCSEEEEEEEEE
T ss_pred eeeccCceEEEEeeccc--ccc---------------cCCCCceEEEEEEEEECCEEcccc-eeeccccCCCcccceeEE
Confidence 55889999999998753 110 111357999999999999999995 699999999999999999
Q ss_pred ecccccCcCccCceEEEEEeecCCC----------------CceeEeEEEEeeecccccccccceeEEeecCCCCCCCCC
Q 004173 91 LSTKYRDLTAHSQLALTVWDVSCGK----------------DERLVGGTTILLFNSKMQLKTGKQKLRLWPGKEADGSLP 154 (770)
Q Consensus 91 fpi~~~dLP~~a~L~~ti~~~~~~~----------------~~~~vG~~~~~LFd~~~~Lr~G~~~L~lwp~~~~d~~~~ 154 (770)
|||+|+||||+|+||||||++.+++ +..++||+|++|||++|.|++|.+.|++||..++++...
T Consensus 275 f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~~l~~G~~~L~lw~~~~~~~~~~ 354 (961)
T 1e7u_A 275 FSIKIKDLPKGALLNLQIYCGAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRFLLRHGEYVLHMWQLSGKGEDQG 354 (961)
T ss_dssp EEEEGGGCCTTCEEEEEEEEEEC--------------------CEEEEEEEESBCTTSBBCCEEEEEECEECCSCC----
T ss_pred eccccccCCcccEEEEEEEecccCccccccccccccccccccceeEEEEeeeeecCCCccccCCEEEEEeeCcccccccc
Confidence 9999999999999999999986432 356999999999999999999999999999876532211
Q ss_pred CCCCCCCCCCchhhHHHHHHHHhhhhcccccccchhhhhhHHHHHHHHhhhhccCCCCceEEEEEeCCCCceeEeecCCC
Q 004173 155 TSTPGKVPKNERGELERLEKLINKYEREQIQRVDWLDRLTFKALEKIKEQENFRNGNSYLYLVVDFGRLEHRVVFQDSGA 234 (770)
Q Consensus 155 ~~~p~~~~~~~~~~~~rle~l~~~~~~G~~~~~~wlD~l~~~~i~~~~~~~~~~~~~~~~~L~iefp~f~~~vv~~~~~~ 234 (770)
+-.|. .|... ..+..++++.|.||||+|.+||+|++.+
T Consensus 355 ~~~~~---------------------~~~~~--------------------~~p~~~~~~~l~ie~~~~~~~v~~p~~~- 392 (961)
T 1e7u_A 355 SFNAD---------------------KLTSA--------------------TNPDKENSMSISILLDNYCHPIALPKHR- 392 (961)
T ss_dssp -CCGG---------------------GGCCC--------------------CCSCTTTSCEEEEEECCSSCBBCCCCCC-
T ss_pred ccccc---------------------cCcCc--------------------CCCCCCCCeEEEEEecCCCCceeecCcc-
Confidence 10000 00000 0122234689999999999999999853
Q ss_pred CCCCCCCccCCCcceeecCCCCCCCCcchHHHHHHHhhhccCCcccCCCCChHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004173 235 NFLLPAPITSTNELVIVWDPEVGKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLWK 314 (770)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~d~e~~~~n~~e~k~~~l~rs~~~~~~d~~lkp~~~~~~~L~~i~~~~p~~~Lt~~ek~llW~ 314 (770)
..+||+..+ .+++|++++|++|+.|+++||++.||++||++||+
T Consensus 393 ---------------~~~~~~~~~---------------------~~~~~~~~~~~~l~~i~~~~p~~~L~~~ek~llW~ 436 (961)
T 1e7u_A 393 ---------------PTPDPEGDR---------------------VRAEMPNQLRKQLEAIIATDPLNPLTAEDKELLWH 436 (961)
T ss_dssp ---------------CC-----CC---------------------CCCCCCHHHHHHHHHHHTSCTTSCCCHHHHHHHHH
T ss_pred ---------------ccccccccc---------------------cccCCCHHHHHHHHHHHhcCccCCCCHHHHHHHHH
Confidence 112333211 24677889999999999999999999999999999
Q ss_pred hHHHhhhchhhHhhhhccccCCCHHHHHHHHHHhcc---c--CCCCHhhhhhccCCCCCCHHHHHHHHHHHhcCChhHHH
Q 004173 315 FRFSLMSEKRALTKFLRSVEWSDVQEAKQALELMGR---W--EMIDVCDALELLSPVFESEEVRAYAVCILERADDDELQ 389 (770)
Q Consensus 315 ~R~~l~~~~~aL~k~L~sv~W~~~~e~~~a~~LL~~---W--~~i~~~dALeLL~~~f~~~~VR~yAV~~L~~~~d~eL~ 389 (770)
||+||.++|+||||||+||+|+++++++||++||.. | ++++|+|||||||++|+|+.||+|||++|++++||+|+
T Consensus 437 ~R~~~~~~p~aL~k~l~sv~w~~~~~v~e~~~lL~~~~~W~~~~~~~~~ALeLL~~~f~d~~VR~yAV~~L~~~~d~~l~ 516 (961)
T 1e7u_A 437 FRYESLKDPKAYPKLFSSVKWGQQEIVAKTYQLLAKREVWDQSALDVGLTMQLLDCNFSDENVRAIAVQKLESLEDDDVL 516 (961)
T ss_dssp THHHHTTCGGGHHHHHTSSCTTCHHHHHHHHHHHHCCHHHHHSCCCHHHHHHTTSTTCCCHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHhhCcHHHHHHheecCCCCHHHHHHHHHHHhccCCCCCCCCCHHHHHHhcCCcCCCHHHHHHHHHHHHhCCHHHHH
Confidence 999999999999999999999999999999999999 9 57999999999999999999999999999999999999
Q ss_pred HhHHHHHHHhhccCCCchHHHHHHHHHhhhchhhHHHHHHHHHHHcc-CchhhhhhHHHHHHHHHHHHhhCCCCCCCcch
Q 004173 390 CYLLQLVQALRFERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFH-DPVHAKRFYSTHEILEESMMKLTPGVDGEDGY 468 (770)
Q Consensus 390 ~yLlQLVQaLkyE~~~~s~La~fLi~rA~~n~~i~~~l~W~L~~e~~-d~~~~~r~~~~~~~l~~~~~~~l~~~~~~~~~ 468 (770)
+||||||||||||++++|+|++|||+||+.|++|||+|||+|++|++ ++.+..| |..++++++. ++ +.
T Consensus 517 ~YL~QLVQaLkyE~~~~s~L~~fLl~ra~~n~~i~h~l~W~l~~e~~~~~~~~~r----~~~ll~~~l~---~~----~~ 585 (961)
T 1e7u_A 517 HYLLQLVQAVKFEPYHDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQSRHYQQR----FAVILEAYLR---GC----GT 585 (961)
T ss_dssp HHHHHHHHHGGGCSSSSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCTTTHHH----HHHHHHHHHT---TS----CH
T ss_pred HHHHHHHHHHhhccccCChHHHHHHHHHhcChHHHHHHHHHhhhhccCChhHHHH----HHHHHHHHHh---hc----cH
Confidence 99999999999999999999999999999999999999999999994 5555555 4667777774 22 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCC----hhHHHHHHHHHHHhhhhhcccCCCCcccCCCCcEEEEEEecCcceec
Q 004173 469 KLWQSLVRQTELTAQLCSIMRDVGNVRGN----TQKKIEKLRQLLSGLLSELTYFEEPIRSPLAPNILITGIVPSESSIF 544 (770)
Q Consensus 469 ~~~~~l~~Q~~~~~~L~~i~~~vk~~~~~----~~~k~e~L~~~L~~~~~~l~~~~~~~~lPldP~~~i~~i~~~~~~v~ 544 (770)
.+++.+.+|.+++++|.+++..||..++. .+++.+.+++.|++. .++ .+|.++.+|+||++.|.+|.+++|+||
T Consensus 586 ~~~~~~~~q~~~~~~L~~i~~~ik~~~~~~~~~~~~~~~~l~~~L~~l-~~i-~vP~~~~lP~dP~v~i~~i~~~~~~V~ 663 (961)
T 1e7u_A 586 AMLHDFTQQVQVIDMLQKVTIDIKSLSAEKYDVSSQVISQLKQKLENL-QNL-NLPQSFRVPYDPGLKAGALVIEKCKVM 663 (961)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSGGGGCCSSCCCHHHHHHHHHHHHHH-HHT-TSCSCEEETTEEEEEEEEECGGGCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhh-hcC-cCCCCccCCCCCceEEEEeecceEEEe
Confidence 66789999999999999999999976542 235567888877653 232 245679999999999999999999999
Q ss_pred ccCcceeEEEEEeCCCC-----eEEEEEeeCcchhHHHHHHHHHHHHHHHHHhcCCCceeeeeEEEEecCCCCccceec-
Q 004173 545 KSALHPLRLTFRTASGG-----TCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP- 618 (770)
Q Consensus 545 ~S~~~P~~l~f~~~dg~-----~~~~IfK~GDDLRQD~lvlQli~lmd~i~~~~~ldl~l~~Y~Vl~t~~~~GlIE~V~- 618 (770)
+|+++|++|+|++.||. .|.+|||+|||||||++++|+|++||.||+++++|++++||+|+|||+++|+||||+
T Consensus 664 ~S~~~P~~l~~~g~Dg~~~~~~~~~~i~K~gDDLRQD~~v~Ql~~lmn~il~~~~~~L~i~~Y~Vipls~~~GlIE~V~n 743 (961)
T 1e7u_A 664 ASKKKPLWLEFKCADPTALSNETIGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVKD 743 (961)
T ss_dssp SSTTCCEEEEEEESCTTCSCCCCEEEEEEESSCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCEEEEETTEEEEECCSS
T ss_pred cccCCceEEEEEccCCCcccCCceeEEEecCcccccchhHHHHHHHHHHHHhhcCCCeEEEeeeEEECCCCCCeEEecCC
Confidence 99999999999999985 799999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHhccC---------cHHHHHHhhCCCCCCCCcccHHHHhhhhccchhhhhhhheecccC--------------
Q 004173 619 SRSLAQILSEHR---------SIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGD-------------- 675 (770)
Q Consensus 619 s~tl~~I~~~~~---------~l~~~l~~~~~~~~~~~~~~~~a~~nFi~S~AgysV~tYiLGIGD-------------- 675 (770)
+.|+++|++..+ .+.+||.++++++..| .++++||++|||||||+||||||||
T Consensus 744 s~tl~~I~~~~~g~~~~f~~~~L~~w~~~~~~~~~~~----~~ar~~F~~S~A~ySvv~YILGigDRH~~NILid~tG~v 819 (961)
T 1e7u_A 744 ATTIAKIQQSTVGNTGAFKDEVLSHWLKEKCPIEEKF----QAAVERFVYSCAGYCVATFVLGIGDRHNDNIMISETGNL 819 (961)
T ss_dssp EEEHHHHHHHHSCSSSCCCSSHHHHHHHHHCCSHHHH----HHHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEETTCCE
T ss_pred CccHHHHHHhccCcccccchhHHHHHHHHhCCChHHH----HHHHHHHHHHHHHHHHHHHHccccCCCCcceEEecCCCE
Confidence 899999998643 4899999999876544 4799999999999999999999999
Q ss_pred ------------------------------------------chhhhhhHHHHHHHHHHHHcChhhHHHHHHHhccCCCC
Q 004173 676 ------------------------------------------SQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSNIP 713 (770)
Q Consensus 676 ------------------------------------------s~~~~~F~~~c~~af~~LRk~~~lil~L~~lm~~s~ip 713 (770)
|+.|+.|+.+|+.||.+||+|++.|++++++|+++|||
T Consensus 820 ~HIDFG~~f~~~~~~l~~~pE~vPFRLT~~mv~~mG~~g~e~s~~fg~F~~~c~~~~~~LR~~~~~l~~ll~lm~~~~lp 899 (961)
T 1e7u_A 820 FHIDFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSLHFQKFQDVCVKAYLALRHHTNLLIILFSMMLMTGMP 899 (961)
T ss_dssp EECCCCCC----------CCCCCSSCCCHHHHHHTTCCSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSCS
T ss_pred EEEeehhhhccCccccCCCCCCCCcccCHHHHHHhcccCCccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCC
Confidence 34589999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhh-ChhhHHHHHHHHHHhh
Q 004173 714 DIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVS-ALFPQMVETIHRWAQY 768 (770)
Q Consensus 714 ~~~~~~d~~i~~l~~rl~l~lse~eA~~~f~~lI~~S~~-s~~t~~~d~~H~~aq~ 768 (770)
||+..+ ++.++++||++++||+||.++|.++|++|++ +|.+++++++|.+++.
T Consensus 900 ~~~~~~--~i~~lr~rf~l~~se~eA~~~~~~lI~~s~~~~~t~~~n~~~h~~~gi 953 (961)
T 1e7u_A 900 QLTSKE--DIEYIRDALTVGKSEEDAKKYFLDQIEVCRDKGWTVQFNWFLHLVLGI 953 (961)
T ss_dssp SCCCHH--HHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHTTCC
T ss_pred ccCchH--HHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcCCeEEehhHHHHHHhh
Confidence 999754 5789999999999999999999999999997 4667888888888763
No 5
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=100.00 E-value=6.9e-124 Score=1072.34 Aligned_cols=498 Identities=48% Similarity=0.783 Sum_probs=447.3
Q ss_pred HHHHHHHhhhccCCcccCCCCChHHHHHHHHHHcCCCCCCCCHHHHHHHHHhHHHhhhchhhHhhhhccccCCCHHHHHH
Q 004173 264 HKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQ 343 (770)
Q Consensus 264 ~k~~~l~rs~~~~~~d~~lkp~~~~~~~L~~i~~~~p~~~Lt~~ek~llW~~R~~l~~~~~aL~k~L~sv~W~~~~e~~~ 343 (770)
.|||||+||+|+|.+|+|+|||+++|++|+.|+++||++.||++||++||+|||||.++|+||||||+||+|++++|++|
T Consensus 3 ~k~~~l~rs~~~~~~d~~lkP~~~~r~~L~~I~~~~p~~~Lt~~ek~llWk~R~~l~~~~~aL~kfL~sV~W~~~~e~~~ 82 (614)
T 3ls8_A 3 SKHHKLARSLRSGPSDHDLKPNAATRDQLNIIVSYPPTKQLTYEEQDLVWKFRYYLTNQEKALTKFLKCVNWDLPQEAKQ 82 (614)
T ss_dssp --------------CGGGCCCCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHTHHHHTTCGGGHHHHHTTCCTTSHHHHHH
T ss_pred HHHHHHHHhccCCCCCCCCCcCHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhhChhHHHHHhccCCCCCHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCHhhhhhccCCCCCCHHHHHHHHHHHhcCChhHHHHhHHHHHHHhhccCCCc-----------------
Q 004173 344 ALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALRFERSDK----------------- 406 (770)
Q Consensus 344 a~~LL~~W~~i~~~dALeLL~~~f~~~~VR~yAV~~L~~~~d~eL~~yLlQLVQaLkyE~~~~----------------- 406 (770)
|++||+.|+|++|+|||||||++|+|+.||+|||+||++++||||++||||||||||||++++
T Consensus 83 a~~LL~~W~~i~~~dALELL~~~f~d~~VR~yAV~~L~~~~D~eL~lYLlQLVQALKyE~~~~~~~~~~~~~~~~~~~~~ 162 (614)
T 3ls8_A 83 ALELLGKWKPMDVEDSLELLSSHYTNPTVRRYAVARLRQADDEDLLMYLLQLVQALKYENFDDIKNGLEPTKKDSQSSVS 162 (614)
T ss_dssp HHHHHHHSCCCCHHHHGGGGSTTCCCHHHHHHHHHHHTTSCHHHHHHTHHHHHHHGGGSCHHHHHHTC------------
T ss_pred HHHHHhhCCCCCHHHHHHhCcccCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999998876
Q ss_pred ---------------------------------------------hHHHHHHHHHhhhchhhHHHHHHHHHHHccCchhh
Q 004173 407 ---------------------------------------------SRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHA 441 (770)
Q Consensus 407 ---------------------------------------------s~La~fLi~rA~~n~~i~~~l~W~L~~e~~d~~~~ 441 (770)
|+||+|||+||++|++|||+|||||++|++|+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~La~FLi~RAl~n~~ig~~lyW~L~~E~~~~~~~ 242 (614)
T 3ls8_A 163 ENVSNSGINSAEIDSSQIITSPLPSVSSPPPASKTKEVPDGENLEQDLCTFLISRACKNSTLANYLYWYVIVECEDQDTQ 242 (614)
T ss_dssp ------------CCGGGSTTCCCCC-------------------CCCHHHHHHHHHHTCHHHHHHHHHHHHHHHHCHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccCChHHHHHHHHHhcCHHHHHHHHhheeeeccCcccc
Confidence 88999999999999999999999999999996532
Q ss_pred ---hhhHHHHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHHHHhhh-hhcc
Q 004173 442 ---KRFYSTHEILEESMMKLTPGVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKLRQLLSGLL-SELT 517 (770)
Q Consensus 442 ---~r~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~Q~~~~~~L~~i~~~vk~~~~~~~~k~e~L~~~L~~~~-~~l~ 517 (770)
..+.++|..+++.|+..+..+++. ...+++.|.+|++|+++|.++++.|+..++++.+|+|+|+++|++.. .++.
T Consensus 243 ~~~~~~~~~Y~~vl~~~l~~l~~g~~~-~~~~r~~L~~Q~~~~~~L~~l~~~v~~~~~~~~kk~e~L~~~L~~~~~~~l~ 321 (614)
T 3ls8_A 243 QRDPKTHEMYLNVMRRFSQALLKGDKS-VRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLS 321 (614)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHSCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHCHHHHCCS
T ss_pred ccchHHHHHHHHHHHHHHHHHHccCch-hHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHhchhhcccc
Confidence 345566777877777655443321 12467899999999999999999999988888899999999997643 3455
Q ss_pred cCCCCcccCCCCcEEEEEEecCcceecccCcceeEEEEEeCCCCeEEEEEeeCcchhHHHHHHHHHHHHHHHHHhcCCCc
Q 004173 518 YFEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTASGGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDL 597 (770)
Q Consensus 518 ~~~~~~~lPldP~~~i~~i~~~~~~v~~S~~~P~~l~f~~~dg~~~~~IfK~GDDLRQD~lvlQli~lmd~i~~~~~ldl 597 (770)
.+ +++++|+||++.|.+|.+++|+||+|+++|++|+|+++||+.|.+|||+|||||||++++|+|++||+||+++++|+
T Consensus 322 ~~-~~~~lPl~P~v~I~~i~p~~~~V~~Sk~~P~~l~~~gsDG~~y~~i~K~gDDLRQD~~~~Ql~~l~n~il~~~~ldL 400 (614)
T 3ls8_A 322 DV-ELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDL 400 (614)
T ss_dssp SC-SSEEETTEEEEEEEEECGGGCEECSSTTCCEEEEEEETTSCEEEEEEEESSCCHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cC-CCCCCCCCCceEEEEEecCeeEEeecccCeEEEEEEccCCCEEEEEEecCCcchHHHHHHHHHHHHHHHHHhcCCCc
Confidence 55 68999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeEEEEecCCCCccceeccccHHHHHhccCcHHHHHHhhCCCCCCCCcccHHHHhhhhccchhhhhhhheecccC--
Q 004173 598 HLTPYNVLATGQDEGLLEFIPSRSLAQILSEHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGD-- 675 (770)
Q Consensus 598 ~l~~Y~Vl~t~~~~GlIE~V~s~tl~~I~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~nFi~S~AgysV~tYiLGIGD-- 675 (770)
+++||+|+|||+++|+||||++.|+++|+++.|+|.+||++++|++.+++++..++++||++|||||||+||||||||
T Consensus 401 ~i~~Y~Vipls~~~GlIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGigDRH 480 (614)
T 3ls8_A 401 KLTPYKVLATSTKHGFMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGVGDRH 480 (614)
T ss_dssp CCCCCCEEESSSSEEEEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred eeeccEEEEecCCCceEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeeccCCC
Confidence 999999999999999999999889999999999999999999999888888878899999999999999999999999
Q ss_pred ----------------------------------------------chhhhhhHHHHHHHHHHHHcChhhHHHHHHHhcc
Q 004173 676 ----------------------------------------------SQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAG 709 (770)
Q Consensus 676 ----------------------------------------------s~~~~~F~~~c~~af~~LRk~~~lil~L~~lm~~ 709 (770)
++.|+.|+.+|+.||.+||+|+++|++||++|++
T Consensus 481 ~~NILld~tG~v~HIDFG~~f~~~p~pe~vPFRLT~~mv~~mG~~~~e~f~~Fr~~c~~~~~~LR~~~~~il~l~~lM~~ 560 (614)
T 3ls8_A 481 LDNLLLTKTGKLFHIDFGYILGRDPKPLPPPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMVD 560 (614)
T ss_dssp TTSEEECTTSCEEECCCSSCTTCCSSSSCCSSCCCHHHHHHTTCTTSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTTT
T ss_pred CcceeEcCCCCEeeeehHHhhccCCCCCCCCeecCHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhc
Confidence 5678999999999999999999999999999999
Q ss_pred CCCCCCCCCchhHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhhChhhHHHHHHH
Q 004173 710 SNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIH 763 (770)
Q Consensus 710 s~ip~~~~~~d~~i~~l~~rl~l~lse~eA~~~f~~lI~~S~~s~~t~~~d~~H 763 (770)
+||||++..++.+|.++++||++++||+||.+||+++|++|++|++|+++|.+|
T Consensus 561 s~lp~~~~~~~~~i~~l~~rf~l~lse~ea~~~~~~lI~~S~~s~~~~~~d~~h 614 (614)
T 3ls8_A 561 ANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYMQSLIDESVHALFAAVVEQIH 614 (614)
T ss_dssp SCCHHHHTSGGGHHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHC--------
T ss_pred CCCCccccChHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHhhC
Confidence 999999998888999999999999999999999999999999999999999999
No 6
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=100.00 E-value=1.3e-121 Score=1068.83 Aligned_cols=519 Identities=44% Similarity=0.757 Sum_probs=449.4
Q ss_pred eecCCCCCCCCcchHHHHHHHhhhccCCcccCCCCChHHHHHHHHHHc-CCCCCCCCHHHHHHHHHhHHHhhhchhhHhh
Q 004173 250 IVWDPEVGKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILK-YPPTRTLSGDEKQLLWKFRFSLMSEKRALTK 328 (770)
Q Consensus 250 ~~~d~e~~~~n~~e~k~~~l~rs~~~~~~d~~lkp~~~~~~~L~~i~~-~~p~~~Lt~~ek~llW~~R~~l~~~~~aL~k 328 (770)
.+||||++++||+|.||++|+||+++|..|+|+|||+++|++|+.|++ +||++.||++||++||+||+||+++|+||||
T Consensus 2 ~~~d~~~~~~n~~e~k~~~l~r~~~~~~~d~~lkP~~~~r~~L~~i~~r~~p~~~Lt~eek~llWk~R~~l~~~~~aL~k 81 (696)
T 2x6h_A 2 SHMDSEIQMENLVERKHHRLARSERSGISDRDAKPTASIRDQLHTIVYRYPPTYVLSSEEQDLVWKFRFYLSSHKKALTK 81 (696)
T ss_dssp ------------------------------------CTTHHHHHHHHHHSCSSCCCCSSHHHHHHHHHTTCCCCHHHHHH
T ss_pred CCCCccccCCChHHHHHHHHhhhhccCCCCccCCCCHHHHHHHHHHHhcCCCCCcCCHHHHHHHHHhHHHHhhChhHHHH
Confidence 479999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred hhccccCCCHHHHHHHHHHhcccCCCCHhhhhhccCCCCCCHHHHHHHHHHHhcCChhHHHHhHHHHHHHhhccC-----
Q 004173 329 FLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALRFER----- 403 (770)
Q Consensus 329 ~L~sv~W~~~~e~~~a~~LL~~W~~i~~~dALeLL~~~f~~~~VR~yAV~~L~~~~d~eL~~yLlQLVQaLkyE~----- 403 (770)
||+||+|+++.|++||++||..|+|++|+||||||+++|+|+.||+|||++|++++||+|++||||||||||||.
T Consensus 82 fL~sv~W~~~~e~~~a~~lL~~W~~~~~~dALeLL~~~f~~~~VR~yAV~~L~~~~de~L~~YLlQLVQALKyE~~~~~~ 161 (696)
T 2x6h_A 82 FLKCINWKLEDEVTQALWMLANWAPMDVEDALELLSPTFTHPQVRKYAVSRLAQAPDEDLLLYLLQLVQALKYEDPRHIV 161 (696)
T ss_dssp HGGGTTTSCHHHHHHHHHHHHHSCCCCHHHHHHHHSTTCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHGGGSCHHHHH
T ss_pred HHhhCCCCCHHHHHHHHHHHhcCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhcchhhhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999992
Q ss_pred --------------------------------------------------------------------------------
Q 004173 404 -------------------------------------------------------------------------------- 403 (770)
Q Consensus 404 -------------------------------------------------------------------------------- 403 (770)
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (696)
T 2x6h_A 162 HLHGCIFPERDVVRSILDDNGSLLDQSSLSDLSATSSGLHASVIPANQRAASVLAAIKSDKSVSPGSAGGSGSGGQGSVA 241 (696)
T ss_dssp HHHHHHC-------------------------------------------------------------------------
T ss_pred ccccccccchhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence
Q ss_pred --------------------------CC-------chHHHHHHHHHhhhchhhHHHHHHHHHHHccC-chhh---hhhHH
Q 004173 404 --------------------------SD-------KSRLSQFLVQRSSHNIELASFLRWYVSVEFHD-PVHA---KRFYS 446 (770)
Q Consensus 404 --------------------------~~-------~s~La~fLi~rA~~n~~i~~~l~W~L~~e~~d-~~~~---~r~~~ 446 (770)
++ +++|++|||+||++|++|||+|||+|++|+++ +... ..+..
T Consensus 242 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~La~FLl~rA~~n~~i~h~l~W~L~~e~~~~~~~~~~~~~~~~ 321 (696)
T 2x6h_A 242 LPNPSAPATPGSSSLPCDSNSNALMLAEGISFGSVPANLCTFLIQRACTNATLANYFYWYLSIEVEEVESVRKQDERAHD 321 (696)
T ss_dssp -------------------------------------CHHHHHHHHHTTCHHHHHHHHHHHHHHHCC-----CCHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccCCHHHHHHHHHHhhChhhHHHHHHHhHhhccCccccccccchHHH
Confidence 12 78999999999999999999999999999998 3322 23455
Q ss_pred HHHHHHHHHHhhCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhccCCCChhHHHHHHHHHHHhh---hhhcccCCCCc
Q 004173 447 THEILEESMMKLTPGVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKLRQLLSGL---LSELTYFEEPI 523 (770)
Q Consensus 447 ~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~Q~~~~~~L~~i~~~vk~~~~~~~~k~e~L~~~L~~~---~~~l~~~~~~~ 523 (770)
+|..+++.|+..+.+++. .+.++++.+.+|.+|+++|.+|++.|+..++++.+|+++|+++|++. +.++..++ ++
T Consensus 322 ~~~~il~~~l~~l~~g~~-~~~~~~~~l~~Q~~~~~~L~~i~~~ik~~~~~~~~k~e~L~~~L~~~~~~~~~l~~~~-~~ 399 (696)
T 2x6h_A 322 MYAMVLKMFLKVLENGNF-NLRGIFYNLRKQRRFIDELVKLVKLVAKEPGNRNKKTEKFQKLLAEQDMFKVNFTNFE-PI 399 (696)
T ss_dssp HHHHHHHHHHHHHHHSCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHSTTSSSSCTTSCC-CE
T ss_pred HHHHHHHHHHHHhhccCc-ccHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHhcchhhcccccccCC-Cc
Confidence 677788888766543221 23368899999999999999999999999888888999999999875 45566664 79
Q ss_pred ccCCCCcEEEEEEecCcceecccCcceeEEEEEeCC-CCeEEEEEeeCcchhHHHHHHHHHHHHHHHHHhcCCCceeeee
Q 004173 524 RSPLAPNILITGIVPSESSIFKSALHPLRLTFRTAS-GGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPY 602 (770)
Q Consensus 524 ~lPldP~~~i~~i~~~~~~v~~S~~~P~~l~f~~~d-g~~~~~IfK~GDDLRQD~lvlQli~lmd~i~~~~~ldl~l~~Y 602 (770)
++|++|++.|.+|.+++|+||+|+++|++|+|++.| |+.|.+|||+|||||||++++|+|++||.||++++++++++||
T Consensus 400 ~lP~~p~v~I~~~~~~~~~V~~S~~~P~~l~~~gsD~G~~y~~i~K~gDDLRQD~rv~Ql~~lmn~il~~~~~~L~i~~Y 479 (696)
T 2x6h_A 400 PFPLDPEIYITKIVPMRTSLFKSALMPAKLTFVTSIAHHEYAAIFKHGDDLRQDQLILQMITLMDKLLRRENLDLKLTPY 479 (696)
T ss_dssp ECSSCTTSEEEEECGGGCEECSSSSCCEEEEEEETTTTCEEEEEEECSSCTHHHHHHHHHHHHHHHHHHHTTCCCCCCCC
T ss_pred cCCCCCCeEEEEEecCeEEEcccccCCeEEEEEecCCCCceeEEEecCcccchhHHHHHHHHHHHHHHHhCCCCcEEecc
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCccceeccccHHHHHhccCcHHHHHHhhCCCCCCCCcccHHHHhhhhccchhhhhhhheecccC-------
Q 004173 603 NVLATGQDEGLLEFIPSRSLAQILSEHRSIISYLQKFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGD------- 675 (770)
Q Consensus 603 ~Vl~t~~~~GlIE~V~s~tl~~I~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~nFi~S~AgysV~tYiLGIGD------- 675 (770)
+|+|||+++||||||++.|+++|++++++|.+||.+++|++..||++..++++||++|||||||+||||||||
T Consensus 480 ~Vipls~~~GLIE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YILGlGDRH~~NIL 559 (696)
T 2x6h_A 480 KVLATSSKHGFLQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLGVGDRHLDNLL 559 (696)
T ss_dssp CEEESSTTCEEEECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHHTCCCCCTTTEE
T ss_pred EEEeccCCCCeeeeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHccCCCCCCcceE
Confidence 9999999999999999889999999999999999999999988898878899999999999999999999999
Q ss_pred -----------------------------------------chhhhhhHHHHHHHHHHHHcChhhHHHHHHHhccCCCCC
Q 004173 676 -----------------------------------------SQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPD 714 (770)
Q Consensus 676 -----------------------------------------s~~~~~F~~~c~~af~~LRk~~~lil~L~~lm~~s~ip~ 714 (770)
++.|+.|+..|+.||.+||+|++.|++++++|++++|||
T Consensus 560 id~tG~v~HIDFG~~f~~~p~pe~VPFRLT~~mv~~mG~~g~eg~~~Fr~~c~~~~~~LR~~~~~il~ll~lml~~~lp~ 639 (696)
T 2x6h_A 560 LTTNGKLFHIDFGYILGRDPKPMPPPMKLSKEMVEAMGGISSEHHHEFRKQCYTAYLHLRRHANVMLNLFSLMVDATVPD 639 (696)
T ss_dssp ECTTSCEEECCCCSCTTCCSSSCCCSSCCCHHHHHHTTSSSSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTTCCCTT
T ss_pred EeCCCCEEEEeehhhhccCCCCcCCCeecCHHHHHHhCCCCcccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHcCCCCc
Confidence 456789999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhhChhhHHHHHHHHHHhhcC
Q 004173 715 IASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIHRWAQYWR 770 (770)
Q Consensus 715 ~~~~~d~~i~~l~~rl~l~lse~eA~~~f~~lI~~S~~s~~t~~~d~~H~~aq~~r 770 (770)
|+.+++.+|.++++||++++||+||.++|+++|++|+++++|++||.+|+||||||
T Consensus 640 ~~~~~~~~i~~l~~rf~l~lseeea~~~~~~lI~~S~~s~~t~~~d~~h~~aq~~r 695 (696)
T 2x6h_A 640 IALEPDKAVKKVEENLQLGLTDEEAVQHLQSLLDVSITAVMPALVEQIHRFTQYWR 695 (696)
T ss_dssp TTSSGGGHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC
T ss_pred cccCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhh
Confidence 99999989999999999999999999999999999999999999999999999998
No 7
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=96.64 E-value=0.014 Score=54.98 Aligned_cols=105 Identities=19% Similarity=0.168 Sum_probs=70.3
Q ss_pred EEEeeCCCCCCeEEEEEeecCCCCCCCCCCCcCCCCCCCCCCcCCCCceEEEEEEEeCCcccccceeeccccCCCCcccc
Q 004173 7 RFFLSCDINLPVKFRVDRLEGTLPSIKSPNSVNDRSGISSTTEERRPELYVECALYIDGAPFGLPMRTRLESMGPMYCWN 86 (770)
Q Consensus 7 ~~~~s~dl~~~~~~ki~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wn 86 (770)
.|....+-...-+++|.-++|..-.. ......+|-||.+.+..++..-....+|..+.-+.++.||
T Consensus 9 ~~g~~~~~~~~~~L~V~v~~a~~L~~--------------~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wn 74 (153)
T 3b7y_A 9 VFGLLEDEENSRIVRVRVIAGIGLAK--------------KDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWN 74 (153)
T ss_dssp EEESSSCCTTCEEEEEEEEEEESCC---------------------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCC
T ss_pred ccCcccCCCCccEEEEEEEEeeCCCC--------------CCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCC
Confidence 56777777777777777777752210 0111346789999988543221223355554445568899
Q ss_pred ccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 87 EPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 87 ewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
|.+.|++.- .+..|.|+|||...-++...+|.+.++|-+
T Consensus 75 e~f~f~v~~----~~~~l~~~V~d~d~~~~d~~iG~~~i~l~~ 113 (153)
T 3b7y_A 75 EEILFRVHP----QQHRLLFEVFDENRLTRDDFLGQVDVPLYP 113 (153)
T ss_dssp EEEEEEECT----TTCEEEEEEEECCSSSCCEEEEEEEEECCS
T ss_pred CEEEEEecC----CCCEEEEEEEECCCCcCCCeeEEEEEEHHH
Confidence 999999762 467899999998765567899999999965
No 8
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=96.56 E-value=0.012 Score=55.66 Aligned_cols=74 Identities=19% Similarity=0.288 Sum_probs=56.4
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
.+|-||.+.+..+++ ...+|+.+.-+.++.|||.+.|++...+|. +..|.|+|||...-.+...+|.+.++|-+
T Consensus 62 ~~dpyv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~-~~~L~i~V~d~d~~~~~~~iG~~~i~l~~ 135 (152)
T 1rsy_A 62 TSDPYVKVFLLPDKK---KKFETKVHRKTLNPVFNEQFTFKVPYSELG-GKTLVMAVYDFDRFSKHDIIGEFKVPMNT 135 (152)
T ss_dssp CCCEEEEEEEETTCC---SCEECCCCTTCSSCEEEEEEEECCCHHHHT-TCEEEEEEEECCSSSCCEEEEEEEEEGGG
T ss_pred CcCeEEEEEEEcCCC---ceEeccccCCCCCCcCcccEEEeecHHHcC-CCEEEEEEEECCCCCCCcEEEEEEEEchh
Confidence 467899999875443 234565554455689999999998776663 57899999998765567899999999865
No 9
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=96.56 E-value=0.019 Score=52.69 Aligned_cols=76 Identities=20% Similarity=0.242 Sum_probs=56.4
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeecc
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (770)
.+|-||.+.+..+++.. ...+|..+.-...+.|||.+.|++...++ +..|.|+|||....++...+|.+.++|-+-
T Consensus 36 ~~dpyv~v~~~~~~~~~-~~~kT~~~~~t~nP~wne~f~f~~~~~~~--~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l 111 (137)
T 3rdl_A 36 LSDPYVKLKLIPDPKNE-SKQKTKTIRSTLNPQWNESFTFKLKPSDK--DRRLSVEIWDWDRTTRNDFMGSLSFGVSEL 111 (137)
T ss_dssp CCCEEEEEEEECCTTCC-CCEECCCCCSCSSCEEEEEEEEECCGGGG--GCEEEEEEEECCSSSCCEEEEEEEEEHHHH
T ss_pred CCCeeEEEEEEcCCCCC-eeecCceEcCCCCCCcccEEEEEcCchhc--CCEEEEEEEECCCCCCCceEEEEEEeHHHh
Confidence 47789999986543222 23456655545668899999999876665 457999999987666677999999999653
No 10
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=96.54 E-value=0.014 Score=53.55 Aligned_cols=76 Identities=14% Similarity=0.139 Sum_probs=57.1
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
.+|-||.+.+..+++.. ...+|..+.-+.++.|||.+.|++.-.+|. +..|.|+|||....++...+|.+.++|=+
T Consensus 36 ~~dpyv~v~~~~~~~~~-~~~kT~~~~~t~nP~wne~f~f~v~~~~l~-~~~l~~~V~d~~~~~~~~~lG~~~i~l~~ 111 (138)
T 3n5a_A 36 TSDPYVKVWLMYKDKRV-EKKKTVTKKRNLNPIFNESFAFDIPTEKLR-ETTIIITVMDKDKLSRNDVIGKIYLSWKS 111 (138)
T ss_dssp BCCEEEEEEEEETTEEE-EEEECCCCSSCSSCEEEEEEEEECCGGGGG-GEEEEEEEEECCSSSCCEEEEEEEESSSS
T ss_pred CcCeEEEEEEEeCCCcc-ceEeCccccCCCCCcCcceEEEECChhhcC-ceEEEEEEEECCCCCCCcEEEEEEEcccc
Confidence 46789999988665432 233565555456689999999998876663 56799999998766667799999999853
No 11
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=96.51 E-value=0.013 Score=55.33 Aligned_cols=76 Identities=17% Similarity=0.253 Sum_probs=57.8
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
.+|-||.+.+..+++.. ...+|..+.-+.++.|||.+.|+|...+|. ++.|.|+|||.....+...+|.+.++|-.
T Consensus 50 ~~dpyv~v~~~~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~~l~-~~~l~v~V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 50 LSDPYVKVNLYHAKKRI-SKKKTHVKKCTPNAVFNELFVFDIPCESLE-EISVEFLVLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp CCCEEEEEEEEETTEEE-EEEECCCCCSCSSEEEEEEEEEECCSSSST-TEEEEEEEEECCTTSCCEEEEEEEESTTC
T ss_pred CCCeEEEEEEEeCCeEe-ceEecCcccCCCCCeecceEEEECCHHHhC-ceEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 46889999998776543 223555554455688999999998877764 57899999998765567799999999844
No 12
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=96.46 E-value=0.016 Score=53.73 Aligned_cols=76 Identities=22% Similarity=0.283 Sum_probs=56.9
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEec-ccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLS-TKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fp-i~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
.+|-||.+.+..++... ...+|+.+.-+.++.|||.+.|+ +...+| .+..|.|+|||...-++...+|.+.++|=+
T Consensus 39 ~~DPyv~v~l~~~~~~~-~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l-~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~ 115 (134)
T 2b3r_A 39 DPNPYVKTYLLPDTHKT-SKRKTKISRKTRNPTFNEMLVYSGYSKETL-RQRELQLSVLSAESLRENFFLGGITLPLKD 115 (134)
T ss_dssp CCCEEEEEEEESCSSSC-CCEECCCCCSCSSCEEEEEEEEESCCHHHH-TTCEEEEEEEECCSSSCCEEEEEEEEEGGG
T ss_pred CCCeEEEEEEEcCCCCC-ceecCCcCcCCCCCCCccEEEECCcCHHHh-CcCEEEEEEEECCCCCCCcEEEEEEEEhhh
Confidence 46789999987544321 23456655545568899999999 877766 457899999998765566799999999865
No 13
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=96.45 E-value=0.021 Score=54.29 Aligned_cols=76 Identities=16% Similarity=0.217 Sum_probs=57.6
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
.+|-||.+.+..+++.. ...+|..+.-+.++.|||.+.|+|...++. +..|.|+|||....++...+|.+.++|-.
T Consensus 45 ~~dpyv~v~l~~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~~l~-~~~l~i~V~d~d~~~~~~~iG~~~i~l~~ 120 (159)
T 1tjx_A 45 LSDPYVKIHLMQNGKRL-KKKKTTIKKNTLNPYYNESFSFEVPFEQIQ-KVQVVVTVLDYDKIGKNDAIGKVFVGYNS 120 (159)
T ss_dssp CCCEEEEEEEEETTEEE-EEEECCCCCSCSSCEEEEEEEEECCGGGGG-GCEEEEEEEECCSSSCCEEEEEEEEETTC
T ss_pred CCCeEEEEEEEeCCcee-ceeeCceecCCCCCcccceEEEEcCHHHhC-CcEEEEEEEECCCCCCCceEEEEEECCCC
Confidence 47889999998766533 233565554455689999999998777664 46799999998765667899999999864
No 14
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=96.40 E-value=0.025 Score=53.13 Aligned_cols=75 Identities=19% Similarity=0.278 Sum_probs=55.8
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
.+|-||.+.+-.+++. ....+|....-...+.|||.+.|++.-.++ +..|.|+|||...-.+...+|.+.++|-+
T Consensus 51 ~~dpyv~v~~~~~~~~-~~~~kT~v~~~t~nP~wne~f~f~v~~~~~--~~~L~i~V~d~d~~~~~~~iG~~~i~l~~ 125 (149)
T 1a25_A 51 LSDPYVKLKLIPDPKS-ESKQKTKTIKCSLNPEWNETFRFQLKESDK--DRRLSVEIWDWDLTSRNDFMGSLSFGISE 125 (149)
T ss_dssp CCCEEEEEEEESCTTC-SSCEECCCCSSCSSCEEEEEEEEECCSGGG--GCEEEEEEEECCSSSCCEEEEEEEEEHHH
T ss_pred CcCeEEEEEEECCCCC-cceEecceeCCCCCCcCCcEEEEEeccccC--CCEEEEEEEECCCCCCCCEEEEEEEEHHH
Confidence 4788999998754432 233456555445568999999999876554 46799999998765567799999999865
No 15
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=96.34 E-value=0.018 Score=53.54 Aligned_cols=74 Identities=19% Similarity=0.295 Sum_probs=56.1
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
.+|-||.+.+..+++. ..+|..+.-+.++.|||.+.|++...++. +..|.|+|||...-.+...+|.+.++|=+
T Consensus 54 ~~dpyv~v~l~~~~~~---~~kT~v~~~t~nP~wne~f~f~v~~~~l~-~~~L~i~V~d~d~~~~~~~iG~~~i~l~~ 127 (143)
T 3f04_A 54 TSDPYVKVFLLPDKKK---KFETKVHRKTLNPVFNEQFTFKVPYSELG-GKTLVMAVYDFDRFSKHDIIGEFKVPMNT 127 (143)
T ss_dssp CCCEEEEEEEESCCSC---CEECCCCCSCSSCEEEEEEEECCCHHHHT-TCEEEEEEEECCSSSCCEEEEEEEEEGGG
T ss_pred CcCcEEEEEEECCCCc---cEECccCcCCCCCcCcCeEEEeecHhhcC-CCEEEEEEEeCCCCCCCceEEEEEEEHHH
Confidence 4778999988755432 34555554455688999999998776664 37899999998766667899999999864
No 16
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=96.23 E-value=0.042 Score=50.72 Aligned_cols=86 Identities=14% Similarity=0.225 Sum_probs=60.8
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEec-ccccCcCccCceEEEEEeecCCCCceeEeEEEEeeecc
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLS-TKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fp-i~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (770)
.+|-||.+.+-.+++ ...+|..+.-...+.|||.+.|+ +...++. +..|.|+|||...-.+...+|.+.++|=+
T Consensus 43 ~~dpyv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~-~~~l~i~V~d~d~~~~~~~lG~~~i~l~~- 117 (138)
T 1ugk_A 43 TSDPYIKMTILPEKK---HKVKTRVLRKTLDPAFDETFTFYGIPYTQIQ-ELALHFTILSFDRFSRDDIIGEVLIPLSG- 117 (138)
T ss_dssp BCEEEEEEEEETTTC---SEEECCCCSSCSSCEEEEEEEEECCCSTTGG-GCEEEEEEEEECSSCCCCCCEEEEEECTT-
T ss_pred CCCCEEEEEEecCCC---ceEecCcCcCCCCCcEeeEEEEcCcCHHHhc-cCEEEEEEEECCCCCCCcEEEEEEEehhH-
Confidence 477899998875443 23456655545568899999995 7777664 57899999998765566789999999964
Q ss_pred cccccccceeEEeec
Q 004173 131 KMQLKTGKQKLRLWP 145 (770)
Q Consensus 131 ~~~Lr~G~~~L~lwp 145 (770)
+..|.....+|.
T Consensus 118 ---l~~~~~~~~~~~ 129 (138)
T 1ugk_A 118 ---IELSEGKMLMNR 129 (138)
T ss_dssp ---CCCTTCCEEEEE
T ss_pred ---ccCCCCcchhhh
Confidence 333333335564
No 17
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=96.16 E-value=0.014 Score=54.30 Aligned_cols=76 Identities=17% Similarity=0.196 Sum_probs=56.5
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeecc
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (770)
.+|-||.+.+..++.. ...+|..+.-..++.|||.+.|+|...+|+ +..|.|+|||...-.+...+|.+.++|=+-
T Consensus 43 ~sDPyv~v~l~~~~~~--~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~-~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l 118 (138)
T 1wfm_A 43 GCDCYVQGSVANRTGS--VEAQTALKKRQLHTTWEEGLVLPLAEEELP-TATLTLTLRTCDRFSRHSVAGELRLGLDGT 118 (138)
T ss_dssp CCCEEEEEEEEETTEE--EEEECCCCCCCSSEECSSCEEEECCTTSST-TCEEEEEEEECCSSCTTSCSEEEEEESSSS
T ss_pred CcceEEEEEEEcCCCc--ccEecccCcCCCCCcCCceEEEEecHHHcC-CCEEEEEEEECCCCCCCcEEEEEEEEcccc
Confidence 4677999988653221 123565554455688999999999887774 478999999987655667899999998654
No 18
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=96.14 E-value=0.033 Score=53.28 Aligned_cols=76 Identities=22% Similarity=0.313 Sum_probs=55.7
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
.+|-||.+.+..++.. ....+|..+.-+.++.|||.+.|++...+|. +..|.|+|||...-++...+|.+.++|-+
T Consensus 57 ~~DPyv~v~l~~~~~~-~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~-~~~L~i~V~d~d~~~~~~~iG~~~i~l~~ 132 (166)
T 2cm5_A 57 YSDPFVKLWLKPDMGK-KAKHKTQIKKKTLNPEFNEEFFYDIKHSDLA-KKSLDISVWDYDIGKSNDYIGGCQLGISA 132 (166)
T ss_dssp CCCEEEEEEEETC----CCEEECCCCCSCSSCEEEEEEEEECCGGGGG-GCEEEEEEEECCSSSCCEEEEEEEEETTC
T ss_pred CCCcEEEEEEECCCCc-cceEeCCcccCCCCCcccceEEEEcchHhcC-CCEEEEEEEECCCCCCCcEEEeEEEeccc
Confidence 4778999988644322 1234566555555689999999998776664 67899999998765567799999999854
No 19
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=96.11 E-value=0.036 Score=52.35 Aligned_cols=75 Identities=16% Similarity=0.204 Sum_probs=56.4
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCC-ceeEeEEEEeeec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKD-ERLVGGTTILLFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~-~~~vG~~~~~LFd 129 (770)
.+|-||.+.+..++... ...+|..+.-+..+.|||.+.|++...++.. .|.|+|||.....+ ...+|.+.++|-+
T Consensus 46 ~~Dpyv~v~l~~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~--~L~i~V~d~d~~~~~d~~lG~~~i~l~~ 121 (153)
T 3fbk_A 46 TCDPYVKISLIPEDSRL-RHQKTQTVPDCRDPAFHEHFFFPVQEEDDQK--RLLVTVWNRASQSRQSGLIGCMSFGVKS 121 (153)
T ss_dssp CCCEEEEEEEESCSCCT-TCEECCCCTTCSSCEEEEEEEEECCGGGTTS--EEEEEEEECCSSGGGCEEEEEEEEEHHH
T ss_pred CCCEEEEEEEEcCCCCc-cEEeccccCCCCCCccccEEEEecccHHhCC--EEEEEEEeCCCCCCCCcEEEEEEEEHHH
Confidence 47789999988544322 3345666555566899999999988777764 49999999876444 6799999999965
No 20
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=96.11 E-value=0.024 Score=52.56 Aligned_cols=76 Identities=20% Similarity=0.234 Sum_probs=55.4
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEec-ccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLS-TKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fp-i~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
.+|-||.+.+..++... ...+|..+.-+..+.|||.+.|+ +...++. ...|.|+|||...-++...+|.+.++|=+
T Consensus 49 ~~dpyv~v~~~~~~~~~-~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~-~~~l~i~V~d~d~~~~d~~iG~~~i~l~~ 125 (142)
T 2chd_A 49 LADPYVKLHLLPGASKS-NKLRTKTLRNTRNPVWNETLQYHGITEEDMQ-RKTLRISVCDEDKFGHNEFIGETRFSLKK 125 (142)
T ss_dssp CCCEEEEEEEESCCSGG-GEEECCCCCSCSSCEEEEEEEEESCCHHHHH-HCEEEEEEEEECTTSCEEEEEEEEEEGGG
T ss_pred CCCCEEEEEEEcCCCCc-ceeeCCcCCCCCCCcCcCEEEEcccCHHHcc-CCEEEEEEEECCCCCCCcEEEEEEEEHHH
Confidence 47789999988544322 23456655545568999999998 5554432 46899999998766667799999999865
No 21
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.03 E-value=0.031 Score=51.67 Aligned_cols=72 Identities=21% Similarity=0.268 Sum_probs=55.4
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
.+|-||.+.+- ++ ..+|..+.-..++.|||.++|++.-.++...+.|.|+|||....++...+|.+.++|-+
T Consensus 26 ~~dpyv~v~~~--~~----~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~ 97 (140)
T 2dmh_A 26 KPDPIVSVIFK--DE----KKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIGQNKLIGTATVALKD 97 (140)
T ss_dssp CCCEEEEEECS--SC----EEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSSSCCCCEEEEEEGGG
T ss_pred CCCeEEEEEEC--CE----eEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCCCCceEEEEEEEHHH
Confidence 46778887654 32 24565554445688999999999887788889999999998765566789999999865
No 22
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=96.03 E-value=0.033 Score=56.48 Aligned_cols=66 Identities=20% Similarity=0.297 Sum_probs=55.1
Q ss_pred CCCccccccEEecccccCcCccCceEEEEEeecCC----CCceeEeEEEEeeeccccc-ccccceeEEeecC
Q 004173 80 GPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCG----KDERLVGGTTILLFNSKMQ-LKTGKQKLRLWPG 146 (770)
Q Consensus 80 ~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~----~~~~~vG~~~~~LFd~~~~-Lr~G~~~L~lwp~ 146 (770)
.+.+.|+|.|.+.|...+. ..+-|.||++-++.. +.+.|||-+-+||++.+|+ |+.|.+.|.++..
T Consensus 87 nk~P~w~EtIKi~LP~~~~-~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~~dG~~L~DG~H~L~vyk~ 157 (220)
T 3l4c_A 87 VKQPRWFETVKVAIPIEDV-NRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMRYDGTTLRDGEHDLIVYKA 157 (220)
T ss_dssp CSSCCCCEEEEEEECTTSS-TTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBCTTSCBCCSEEEEEEEEEC
T ss_pred CCCCCceEeEEEeeChhhc-CCeEEEEEEEEecccccccccCCeeEEEEEEcccCCCcEEccCCEEEEEEEc
Confidence 4668899999999888766 568999999987643 2346999999999999875 9999999999863
No 23
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=96.02 E-value=0.035 Score=52.05 Aligned_cols=77 Identities=17% Similarity=0.174 Sum_probs=57.2
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeecc
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (770)
.+|-||.+.+..++... ...+|..+.-+..+.|||.+.|++...++. +..|.|+|||....++...+|.+.++|-+-
T Consensus 44 ~~dpyv~v~l~~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~~~~-~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l 120 (148)
T 3fdw_A 44 RSNPYVKTYLLPDKSRQ-GKRKTSIKRDTVNPLYDETLRYEIPESLLA-QRTLQFSVWHHGRFGRNTFLGEAEIQMDSW 120 (148)
T ss_dssp BCCEEEEEEEETCCSGG-GEEECCCCSSCSSCEEEEEEEEECCSTTGG-GCEEEEEEEEECGGGCEEEEEEEEEEHHHH
T ss_pred CCCeEEEEEEEcCCccc-CccccccCCCCCCCcEeeEEEEEeChhHhC-ceEEEEEEEECCCCcCCcEEEEEEEEcccc
Confidence 46789999987544322 234566555455688999999998877763 567999999987655677999999999653
No 24
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=96.01 E-value=0.043 Score=49.82 Aligned_cols=76 Identities=21% Similarity=0.291 Sum_probs=51.3
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecc-cccCcCccCceEEEEEeecCCCC--ceeEeEEEEeee
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLST-KYRDLTAHSQLALTVWDVSCGKD--ERLVGGTTILLF 128 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi-~~~dLP~~a~L~~ti~~~~~~~~--~~~vG~~~~~LF 128 (770)
.+|-||.+.+..++.. ....+|..+.-+..+.|||.+.|++ ...++ .+..|.|+|||....++ ...+|.+.++|=
T Consensus 38 ~~dpyv~v~~~~~~~~-~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~-~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~ 115 (129)
T 2bwq_A 38 PRNPYVKIYFLPDRSD-KNKRRTKTVKKTLEPKWNQTFIYSPVHRREF-RERMLEITLWDQARVREEESEFLGEILIELE 115 (129)
T ss_dssp CBCEEEEEEEESSCSG-GGEEECCCCSSBSSCEEEEEEEECSCCGGGG-GGCEEEEEEEEC-------CEEEEEEEEEGG
T ss_pred CCCCEEEEEEecCCCC-CcceecccccCCCCCccccEEEEccCCHHHh-cCCeEEEEEEECCcCcCcCCceeEEEEEEcc
Confidence 4677999998754422 1234565554455688999999994 44443 46799999999876544 678999999985
Q ss_pred c
Q 004173 129 N 129 (770)
Q Consensus 129 d 129 (770)
+
T Consensus 116 ~ 116 (129)
T 2bwq_A 116 T 116 (129)
T ss_dssp G
T ss_pred c
Confidence 4
No 25
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.93 E-value=0.04 Score=51.08 Aligned_cols=74 Identities=20% Similarity=0.271 Sum_probs=53.8
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecc-cccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLST-KYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi-~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
.+|-||.+.+-.+++. ..+|+.+.-+.++.|||.+.|++ ...++ ....|.|+|||...-.+...+|.+.++|-+
T Consensus 46 ~~dpyv~v~~~~~~~~---~~kT~v~~~t~nP~wne~f~f~~~~~~~~-~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~ 120 (141)
T 2d8k_A 46 TSDPFVKIYLLPDKKH---KLETKVKRKNLNPHWNETFLFEGFPYEKV-VQRILYLQVLDYDRFSRNDPIGEVSIPLNK 120 (141)
T ss_dssp CCCEEEEEEEESCCSS---EEECCCCTTCSSCCCCEEEEECSCCHHHH-TTSEEEEEEEECCSSSSCEEEEEEEEETTT
T ss_pred CCCcEEEEEEECCCCc---cEeCceEcCCCCCccccEEEECccCHHHc-ccCEEEEEEEECCCCCCCcEEEEEEEEhhh
Confidence 4778999988754432 34565544455688999999984 33344 357899999998765567799999999865
No 26
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.91 E-value=0.023 Score=53.19 Aligned_cols=75 Identities=19% Similarity=0.219 Sum_probs=55.5
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeecc
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (770)
.+|-||.+.+..+++. ..+|..+.-...+.|||.+.|++...+++ +..|.|+|||...-.+...+|.+.++|=+-
T Consensus 53 ~~dpyv~v~l~~~~~~---~~kT~v~~~t~nP~wne~f~f~v~~~~l~-~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l 127 (147)
T 2enp_A 53 HSNPYVKICLLPDQKN---SKQTGVKRKTQKPVFEERYTFEIPFLEAQ-RRTLLLTVVDFDKFSRHCVIGKVSVPLCEV 127 (147)
T ss_dssp CCCCEEEEEEETCCSS---CEECCCCCSCSSCCCCBCCEECCCHHHHH-HSEEEEEEECCSTTCCSCCCEEEEEETTTS
T ss_pred CCCcEEEEEEEeCCCc---ceEeecccCCCCCeEeeeEEEEeChHHhc-cCEEEEEEEECCCCcCCcEEEEEEEechhc
Confidence 4677999998754432 34566555455688999999998766653 458999999987655567899999998543
No 27
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=95.89 E-value=0.018 Score=55.14 Aligned_cols=78 Identities=21% Similarity=0.226 Sum_probs=57.4
Q ss_pred CCCceEEEEEEEeC-CcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 51 RRPELYVECALYID-GAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 51 ~~~~l~V~~~l~~~-~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
..+|-||.+.+... +... ...+|..+.-+.++.|||.+.|+|...+|. +..|.|+|||...-++...+|.+.++|=+
T Consensus 62 g~sDPyVkv~l~~~~~~~~-~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~-~~~L~~~V~d~d~~~~~d~iG~~~i~l~~ 139 (155)
T 2z0u_A 62 QDQKVNIRVAVLPCSESTT-CLFRTRPLDASDTLVFNEVFWVSMSYPALH-QKTLRVDVCTTDRSHLEECLGGAQISLAE 139 (155)
T ss_dssp CCSEEEEEEEEESCSCHHH-HEEECCCEECCSSEEEEEEEEEECCHHHHH-HCEEEEEEEEECTTSCEEEEEEEEEECTT
T ss_pred CCCCEEEEEEEecCCCCCc-cceeCCcCCCCCCCccccEEEEEcCHHHhC-cCEEEEEEEECCCCCCCcEEEEEEEEHHH
Confidence 34788999998742 1111 124566555455688999999998877763 67899999998776677899999999855
Q ss_pred c
Q 004173 130 S 130 (770)
Q Consensus 130 ~ 130 (770)
-
T Consensus 140 l 140 (155)
T 2z0u_A 140 V 140 (155)
T ss_dssp S
T ss_pred c
Confidence 3
No 28
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=95.76 E-value=0.052 Score=52.47 Aligned_cols=75 Identities=17% Similarity=0.250 Sum_probs=51.8
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeecc
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (770)
.+|-||.+.+......-....+|..+.-...+.|||.+.|++. +....|.|+|||...-++...+|.+.++|-+-
T Consensus 28 ~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~----~~~~~L~~~V~d~d~~~~d~~lG~~~i~l~~l 102 (176)
T 3m7f_B 28 ASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVL----PQRHRILFEVFDENRLTRDDFLGQVDVPLYPL 102 (176)
T ss_dssp CCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEEC----TTTCEEEEEEEECC----CEEEEEEEEESCSC
T ss_pred CcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEc----CCCCEEEEEEEECCCCCCCcEEEEEEEEHHHc
Confidence 4677999998853221112335655554556889999999976 45578999999987655667999999998653
No 29
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=95.55 E-value=0.063 Score=55.61 Aligned_cols=76 Identities=16% Similarity=0.221 Sum_probs=58.5
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
.+|-||.+.+..+|+... ..+|..+.-+..+.|||.+.|++...+|. +..|.|+|||...-++...+|.+.+++-+
T Consensus 170 ~~dpyv~v~~~~~~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~l~-~~~l~i~V~d~d~~~~~~~iG~~~i~l~~ 245 (284)
T 2r83_A 170 LSDPYVKIHLMQNGKRLK-KKKTTIKKNTLNPYYNESFSFEVPFEQIQ-KVQVVVTVLDYDKIGKNDAIGKVFVGYNS 245 (284)
T ss_dssp CCCEEEEEEEEETTEEEE-EEECCCCCSCSSCEEEEEEEEECCTTTGG-GEEEEEEEEECCSSSCCCEEEEEEEETTC
T ss_pred CcCeEEEEEEEeCCcEee-eeccceecCCCCCEEceeEEEeCCHHHhC-ceEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 478899999987765432 23555554455689999999999887774 45799999998766667899999999964
No 30
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=95.50 E-value=0.041 Score=50.85 Aligned_cols=81 Identities=15% Similarity=0.235 Sum_probs=55.1
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeeccc
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNSK 131 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~~ 131 (770)
.+|-||.+.+ ++... -+|..+.-+.++.|||.++|++. ....|.|+|||...-++...+|.+.++|=+
T Consensus 37 ~~DPyv~v~l--~~~~~---~~T~~~~~t~nP~WnE~f~f~v~-----~~~~L~~~V~d~d~~~~dd~iG~~~i~l~~-- 104 (136)
T 1gmi_A 37 LLDPYIALNV--DDSRI---GQTATKQKTNSPAWHDEFVTDVC-----NGRKIELAVFHDAPIGYDDFVANCTIQFEE-- 104 (136)
T ss_dssp CCCEEEEEEE--TTEEE---EECCCCSSCSSCEEEEEEEEEEE-----EECEEEEEEEECCSSSSCEEEEEEEEEHHH--
T ss_pred CcCcEEEEEE--CCeEe---eeeeEECCCcCCccCCEEEEEec-----CCCEEEEEEEeCCCCCCCCEEEEEEEEHHH--
Confidence 3788999987 55432 24555444557899999999964 338999999997755566799999999843
Q ss_pred ccccccceeEEeec
Q 004173 132 MQLKTGKQKLRLWP 145 (770)
Q Consensus 132 ~~Lr~G~~~L~lwp 145 (770)
.+..|......|.
T Consensus 105 -l~~~~~~~~~~w~ 117 (136)
T 1gmi_A 105 -LLQNGSRHFEDWI 117 (136)
T ss_dssp -HTSTTCSEEEEEE
T ss_pred -hcccCCCCccEEE
Confidence 2222333345674
No 31
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.46 E-value=0.059 Score=49.89 Aligned_cols=75 Identities=16% Similarity=0.161 Sum_probs=54.7
Q ss_pred CceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCC--CceeEeEEEEeeec
Q 004173 53 PELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGK--DERLVGGTTILLFN 129 (770)
Q Consensus 53 ~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~--~~~~vG~~~~~LFd 129 (770)
+|-||.+.+..+++.. ...+|..+.-+.++.|||.+.|++...++. +..|.|+|||...-. ....+|.+.++|=+
T Consensus 44 ~dpyv~v~l~~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~~l~-~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~ 120 (142)
T 2dmg_A 44 SDPYVRMYLLPDKRRS-GRRKTHVSKKTLNPVFDQSFDFSVSLPEVQ-RRTLDVAVKNSGGFLSKDKGLLGKVLVALAS 120 (142)
T ss_dssp CCEEEEEEEESCCCSS-SCEECCCCCSCSSCEEEEEEEECCCHHHHH-HCEEEEEEEECCCSSCCSCCCCEEEEEECCC
T ss_pred CCeeEEEEEEcCCCCC-CcccCCccCCCCCCCcCceEEEEecHHHhC-cCEEEEEEEECCCccccCCcEEEEEEEeccc
Confidence 7779999998655422 234566555455689999999998766653 468999999987533 23589999999854
No 32
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=95.45 E-value=0.056 Score=49.58 Aligned_cols=69 Identities=23% Similarity=0.331 Sum_probs=51.1
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeecc
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (770)
.+|-||.+.+ +++ ..+|+...-...+.|||.+.|++. + ..+.|.|+|||....++...+|.+.++|-+-
T Consensus 33 ~~dpyv~v~~--~~~----~~kT~~~~~t~nP~wne~f~f~~~--~--~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l 101 (133)
T 2ep6_A 33 KSDPFCLLEL--GND----RLQTHTVYKNLNPEWNKVFTFPIK--D--IHDVLEVTVFDEDGDKPPDFLGKVAIPLLSI 101 (133)
T ss_dssp CCCEEEEEEE--TTE----EEECCCCSSCSSCCCCEEEEEEES--C--TTCEEEEEEEEEETTEEEEECCBCEEEGGGC
T ss_pred CcCeEEEEEE--CCE----EEEeeeecCCCCCccccEEEEEec--C--CCCEEEEEEEECCCCCCCCeeEEEEEEHHHc
Confidence 4677888876 443 335655444556889999999975 2 3578999999987655677999999998653
No 33
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=95.38 E-value=0.039 Score=53.30 Aligned_cols=74 Identities=22% Similarity=0.289 Sum_probs=55.6
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEE-eecCCCCceeEeEEEEeeecc
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVW-DVSCGKDERLVGGTTILLFNS 130 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~-~~~~~~~~~~vG~~~~~LFd~ 130 (770)
.+|-||.+.+..+++.. ...+|..+.-..++.|||.++|++.. .+..|.|+|| |...-++...+|.+.++|=+-
T Consensus 51 ~~DPyv~v~l~~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~----~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l 125 (171)
T 2q3x_A 51 TPAPYVKVYLLENGACI-AKKKTRIARKTLDPLYQQSLVFDESP----QGKVLQVIVWGDYGRMDHKCFMGVAQILLEEL 125 (171)
T ss_dssp CCEEEEEEEEEETTEEE-EEEECCCCCSCSSCEEEEEEECSSCC----TTEEEEEEEEEECSTTCSSEEEEEEEECGGGS
T ss_pred CCCceEEEEEECCCccc-cceeCccCCCCCCCCCCcEEEEEecC----CCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHc
Confidence 47889999998766533 23356555445568899999999853 4689999999 877655677999999998653
No 34
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=95.34 E-value=0.024 Score=52.59 Aligned_cols=77 Identities=19% Similarity=0.270 Sum_probs=53.3
Q ss_pred CCceEEEEEEEeCCccc--------ccceeeccccCCCCccccccEEec-ccccCcCccCceEEEEEeecCCCCceeEeE
Q 004173 52 RPELYVECALYIDGAPF--------GLPMRTRLESMGPMYCWNEPITLS-TKYRDLTAHSQLALTVWDVSCGKDERLVGG 122 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l--------~~p~~T~~~~~~~~~~Wnewl~fp-i~~~dLP~~a~L~~ti~~~~~~~~~~~vG~ 122 (770)
.+|-||.+.+-.++... ....+|+.+.-+.++.|||.+.|+ +...++ ....|.|+|||...-++...+|.
T Consensus 38 ~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l-~~~~l~i~V~d~d~~~~~~~lG~ 116 (142)
T 1rh8_A 38 YSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQL-MKKTLEVTVWDYDRFSSNDFLGE 116 (142)
T ss_dssp CSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHH-TTCEEEEEEEEECSSSCEEEEEE
T ss_pred CCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHc-cCCEEEEEEEECCCCCCCceEEE
Confidence 46779998876443221 011234433323458899999998 777666 35689999999876656779999
Q ss_pred EEEeeec
Q 004173 123 TTILLFN 129 (770)
Q Consensus 123 ~~~~LFd 129 (770)
+.++|=+
T Consensus 117 ~~i~l~~ 123 (142)
T 1rh8_A 117 VLIDLSS 123 (142)
T ss_dssp EEEETTS
T ss_pred EEEeccc
Confidence 9999854
No 35
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=95.32 E-value=0.055 Score=49.81 Aligned_cols=76 Identities=21% Similarity=0.291 Sum_probs=53.5
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEec-ccccCcCccCceEEEEEeecCCCC--ceeEeEEEEeee
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLS-TKYRDLTAHSQLALTVWDVSCGKD--ERLVGGTTILLF 128 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fp-i~~~dLP~~a~L~~ti~~~~~~~~--~~~vG~~~~~LF 128 (770)
.+|-||.+.+..++.. ....+|..+.-+..+.|||.+.|+ +...++ .+..|.|+|||.....+ ...+|.+.++|=
T Consensus 41 ~~dpyv~v~~~~~~~~-~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~-~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~ 118 (141)
T 1v27_A 41 PRNPYVKIYFLPDRSD-KNKRRTKTVKKTLEPKWNQTFIYSPVHRREF-RERMLEITLWDQARVREEESEFLGEILIELE 118 (141)
T ss_dssp CCCEEEECCCSSCCSS-SSCCBCCCCSSCSSCCCCCCCEECSCCTTGG-GTCEEEEEEEEBCSSSSCCBCCCEEEEEEGG
T ss_pred CCCCEEEEEEecCCCC-CcceeCccccCCCCCccccEEEEccCCHHHh-cCCEEEEEEEECCCCcCCCCceEEEEEEEcc
Confidence 4677999987643321 123355555445568899999999 444444 45789999999876554 678999999986
Q ss_pred c
Q 004173 129 N 129 (770)
Q Consensus 129 d 129 (770)
+
T Consensus 119 ~ 119 (141)
T 1v27_A 119 T 119 (141)
T ss_dssp G
T ss_pred c
Confidence 5
No 36
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=95.00 E-value=0.17 Score=47.08 Aligned_cols=69 Identities=16% Similarity=0.229 Sum_probs=50.9
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCC-----------CCceeE
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCG-----------KDERLV 120 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~-----------~~~~~v 120 (770)
.+|-||.+.+ +++ ..+|....-+.++.|||.+.|++.- .+..|.|+|||.... ++...+
T Consensus 37 ~~dpyv~v~~--~~~----~~kT~~~~~t~nP~Wne~f~f~v~~----~~~~l~~~v~d~d~~~~~~~~~~~~~~~~~~l 106 (148)
T 3kwu_A 37 SSDPYVTVQV--GKT----KKRTKTIYGNLNPVWEENFHFECHN----SSDRIKVRVLDEDDDIKSRVKQRFKRESDDFL 106 (148)
T ss_dssp CCCEEEEEEE--TTE----EEECCCCCSCSSCEEEEEEEEEECS----TTCEEEEEEEECCCSHHHHHHTTTSSCSSEEE
T ss_pred CcCeEEEEEE--CCE----EEECCccCCCCCCCcccEEEEEecC----CCCEEEEEEEECCCCccccccccccCCCCccE
Confidence 4677988887 442 3356555545568999999998753 247899999998753 467899
Q ss_pred eEEEEeeecc
Q 004173 121 GGTTILLFNS 130 (770)
Q Consensus 121 G~~~~~LFd~ 130 (770)
|.+.++|=+-
T Consensus 107 G~~~i~l~~l 116 (148)
T 3kwu_A 107 GQTIIEVRTL 116 (148)
T ss_dssp EEEEEEGGGC
T ss_pred EEEEEEHHHC
Confidence 9999998654
No 37
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=94.98 E-value=0.057 Score=52.00 Aligned_cols=68 Identities=15% Similarity=0.158 Sum_probs=49.7
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
.+|-||.+.| ++... .+|..+.-+.++.|||.++|++. ....|.|+|||-..-++...+|.++++|=+
T Consensus 59 ~sDPYv~v~l--~~~~~---~kT~v~~ktlnP~WNE~F~f~v~-----~~~~L~~~V~D~d~~~~dd~iG~~~i~l~~ 126 (157)
T 2fk9_A 59 LLDPYLTVSV--DQVRV---GQTSTKQKTNKPTYNEEFCANVT-----DGGHLELAVFHETPLGYDHFVANCTLQFQE 126 (157)
T ss_dssp CCCEEEEEEE--TTEEE---EECCCCSSCSSCEEEEEEEEEEE-----EECEEEEEEEECCSSSSCEEEEEEEEEHHH
T ss_pred CCCeEEEEEE--CCEee---EEeeecCCCCCCccCcEEEEEcC-----CCCEEEEEEEECCCCCCCCEEEEEEEEHHH
Confidence 4788999887 45432 24554444556899999999864 356899999997655556799999999843
No 38
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=94.72 E-value=0.17 Score=59.04 Aligned_cols=85 Identities=18% Similarity=0.163 Sum_probs=60.2
Q ss_pred CCCceEEEEEEEeCCcccccceeeccccCC-CCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 51 RRPELYVECALYIDGAPFGLPMRTRLESMG-PMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 51 ~~~~l~V~~~l~~~~~~l~~p~~T~~~~~~-~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
..+|-||++.+...... +...+|+.+.-. .++.|||.++|++...++ +.|.|+|||....++...+|.++++|=
T Consensus 518 ~~~DPYV~V~l~g~~~d-~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el---~~L~~~V~D~D~~~~dd~iG~~~ipl~- 592 (624)
T 1djx_A 518 SIVDPKVIVEIHGVGRD-TGSRQTAVITNNGFNPRWDMEFEFEVTVPDL---ALVRFMVEDYDSSSKNDFIGQSTIPWN- 592 (624)
T ss_dssp SCCCEEEEEEEESSGGG-CEEEECCCCTTCSSSCEEEEEEEEEESCGGG---CEEEEEEEECCSSSCCEEEEEEEEEGG-
T ss_pred CCCCcEEEEEEecCCCC-cceeecccccCCCCCCccCceEEEEEecCCC---CEEEEEEEEcCCCCCCceeEEEEEEHH-
Confidence 35788999998742111 112356554433 468899999999875444 899999999876556779999999984
Q ss_pred ccccccccceeEEe
Q 004173 130 SKMQLKTGKQKLRL 143 (770)
Q Consensus 130 ~~~~Lr~G~~~L~l 143 (770)
.|++|...+.+
T Consensus 593 ---~L~~G~r~v~L 603 (624)
T 1djx_A 593 ---SLKQGYRHVHL 603 (624)
T ss_dssp ---GBCCEEEEEEE
T ss_pred ---HcCCCcEEEeC
Confidence 57788765554
No 39
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=94.68 E-value=0.15 Score=49.50 Aligned_cols=66 Identities=26% Similarity=0.475 Sum_probs=50.1
Q ss_pred CceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 53 PELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 53 ~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
+|-||.+.+ ++ ...+|..+.-+..+.|||.+.|++. ....|.|+|||...-++...+|.+.++|=+
T Consensus 57 sDPYv~v~~--~~----~~~kT~v~~~tlnP~Wne~f~f~v~-----~~~~L~~~V~D~d~~~~dd~lG~~~i~l~~ 122 (173)
T 2nq3_A 57 PSPYVEVTV--DG----QSKKTEKCNNTNSPKWKQPLTVIVT-----PVSKLHFRVWSHQTLKSDVLLGTAALDIYE 122 (173)
T ss_dssp CCEEEEEEE--TT----EEEECCCCSSCSSCEEEEEEEEEEC-----TTCEEEEEEEECCSSSCCEEEEEEEEEHHH
T ss_pred CCeEEEEEE--CC----EEeEccccCCCCCCeECCEEEEEeC-----CCCEEEEEEEECCCCCCCceEEEEEEEHHH
Confidence 677988876 44 2345655554556899999999873 388999999998765567799999999854
No 40
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=94.68 E-value=0.12 Score=46.65 Aligned_cols=78 Identities=23% Similarity=0.293 Sum_probs=54.1
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeeccc
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNSK 131 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~~ 131 (770)
.+|-||.+.+-.+++ ...+|+.+.-+.++.|||.+.|++.. +..+.|.|+|||.... +...+|.+.++|=+
T Consensus 26 ~~dpyv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~---~~~~~l~i~V~d~d~~-~~~~iG~~~i~l~~-- 96 (126)
T 1rlw_A 26 TPDPYVELFISTTPD---SRKRTRHFNNDINPVWNETFEFILDP---NQENVLEITLMDANYV-MDETLGTATFTVSS-- 96 (126)
T ss_dssp CCCEEEEEECTTSTT---CCEECCCCTTCSSCEEEEEEEEEECT---TSCCEEEEEEEECCSS-CCEEEEEEEEEGGG--
T ss_pred CCCCEEEEEEccCCC---ceEEccccCCCCCCcccceEEEEecC---CCCCEEEEEEEECCCC-CCceeEEEEEEHHH--
Confidence 467798887643221 33456555545568999999999744 3478999999997654 36699999999943
Q ss_pred cccccccee
Q 004173 132 MQLKTGKQK 140 (770)
Q Consensus 132 ~~Lr~G~~~ 140 (770)
|..|...
T Consensus 97 --l~~~~~~ 103 (126)
T 1rlw_A 97 --MKVGEKK 103 (126)
T ss_dssp --SCTTCEE
T ss_pred --ccCCCcE
Confidence 4455543
No 41
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=94.54 E-value=0.039 Score=58.01 Aligned_cols=76 Identities=16% Similarity=0.232 Sum_probs=58.4
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
.+|-||.+.+..+|+.. ...+|..+.-..++.|||.+.|++...+| .+..|.|+|||...-++...+|.+.+++-+
T Consensus 172 ~~Dpyv~v~l~~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~~l-~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~ 247 (296)
T 1dqv_A 172 FSDPYVKASLISEGRRL-KKRKTSIKKNTLNPTYNEALVFDVAPESV-ENVGLSIAVVDYDCIGHNEVIGVCRVGPEA 247 (296)
T ss_dssp CCCEEEEECCCTTCCTT-SCEECCCCCSCSSCEEEECCCCCCCSGGG-GSCCCCCEEEECCSSSCCEEEEECCCSSCT
T ss_pred CCCcEEEEEEEeCCcCc-cceecceecCCCCCeECceEEEEcCHHHc-cCcEEEEEEEeCCCCCCCceEEEEEECCcc
Confidence 46889999988666543 23356655545568999999999887776 456899999998766677899999998864
No 42
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=94.53 E-value=0.2 Score=51.78 Aligned_cols=74 Identities=19% Similarity=0.302 Sum_probs=54.5
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
.+|-||.+.+-.+++. ..+|..+.-+.++.|||.+.|++...++. ...|.|+|||...-++...+|.+.++|=+
T Consensus 39 ~~dpyv~v~~~~~~~~---~~~T~~~~~~~nP~wne~f~f~v~~~~~~-~~~l~~~V~d~d~~~~~~~lG~~~i~l~~ 112 (284)
T 2r83_A 39 TSDPYVKVFLLPDKKK---KFETKVHRKTLNPVFNEQFTFKVPYSELA-GKTLVMAVYDFDRFSKHDIIGEFKVPMNT 112 (284)
T ss_dssp SCCEEEEEEEETCTTS---CEECCCCCSCSSCEEEEEEEECCCGGGCT-TCEEEEEEEECCSSSCCCEEEEEEEEGGG
T ss_pred CCCeEEEEEEEcCCCc---eEeCCcccCCCCCeeCceEEEEechHHhC-cCEEEEEEEECCCCCCCceeEEEEEcchh
Confidence 4777999988644322 23454444345688999999998777663 56899999998765566799999999865
No 43
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=94.50 E-value=0.067 Score=49.05 Aligned_cols=68 Identities=22% Similarity=0.416 Sum_probs=49.3
Q ss_pred CCceEEEEEEEeCCcccccceeecccc-CCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLES-MGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~-~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
.+|-||.+.+ +++ ..+|+... -...+.|||.+.|++. + ....|.|+|||...-.+...+|.+.++|-+
T Consensus 30 ~~dpyv~v~~--~~~----~~kT~~~~~~~~nP~Wne~f~f~v~--~--~~~~l~~~V~d~~~~~~d~~lG~~~i~l~~ 98 (136)
T 1wfj_A 30 NMDPYVQLTC--RTQ----DQKSNVAEGMGTTPEWNETFIFTVS--E--GTTELKAKIFDKDVGTEDDAVGEATIPLEP 98 (136)
T ss_dssp SSCCCEEEES--SSC----EEECCCCTTCCSSCEEEEEEEEEEE--S--SCCEEEEEECCSSSCTTTCCSEEEEEESHH
T ss_pred CcCceEEEEE--CCc----cceeEeccCCCCCCccCcEEEEEEC--C--CCCEEEEEEEECCCCCCCceEEEEEEEHHH
Confidence 3566877765 332 24555443 3456889999999976 2 678999999998765567789999999864
No 44
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=94.30 E-value=0.09 Score=48.64 Aligned_cols=65 Identities=17% Similarity=0.254 Sum_probs=46.2
Q ss_pred CCceEEEEEEEeCCcccccceeecc-ccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRL-ESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~-~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
.+|-||.++ +. ...|+. +.-..++.|||.+.|++. +.+..|.|+|||.. ..+...+|.+.++|=+
T Consensus 22 ~~DPYv~v~---~~-----~~kt~~~~~~t~nP~WnE~f~f~v~----~~~~~L~~~V~D~d-~~~dd~iG~~~i~l~~ 87 (131)
T 2cjt_A 22 KFNTYVTLK---VQ-----NVKSTTIAVRGSQPSWEQDFMFEIN----RLDLGLTVEVWNKG-LIWDTMVGTVWIPLRT 87 (131)
T ss_dssp GCEEEEEEE---ET-----TEEEECCCEESSSCEEEEEEEEEEC----CCSSEEEEEEEECC-SSCEEEEEEEEEEGGG
T ss_pred CcCeEEEEE---ec-----CEEEeEecCCCCCceECCEEEEEEe----CCCCeEEEEEEECC-CCCCCeEEEEEEEHHH
Confidence 467799988 11 222222 112346889999999986 24567999999987 5567799999999965
No 45
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=93.66 E-value=0.36 Score=43.98 Aligned_cols=84 Identities=18% Similarity=0.196 Sum_probs=54.5
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCC---ceeEeEEEEeee
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKD---ERLVGGTTILLF 128 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~---~~~vG~~~~~LF 128 (770)
.+|-||.+.+-.++ ...+|..+.-+.++.|||.+.|++.-. ..|.|+|||...-.+ ...+|.+.+++=
T Consensus 25 ~sDpyv~v~~~~~~----~~~kT~v~~~t~nP~wne~f~f~v~~~-----~~l~~~v~d~d~~~~~~~d~~lG~~~i~l~ 95 (132)
T 3pyc_A 25 LPDPFAKIVVDGSG----QCHSTDTVKNTLDPKWNQHYDLYVGKT-----DSITISVWNHKKIHKKQGAGFLGCVRLLSN 95 (132)
T ss_dssp CCCEEEEEEETTTC----CEEECCCCSSCSSCEEEEEEEEEEETT-----CCEEEEEEEGGGTTSSTTTTEEEEEEECHH
T ss_pred CcCeEEEEEECCCC----ceEECCccCCCCCCCccCEEEEEeCCC-----CEEEEEEEECCCCCCCCCCCceEEEEEeHH
Confidence 46779988773222 234566655555689999999987432 349999999865433 468999999865
Q ss_pred cccccccccceeEEee
Q 004173 129 NSKMQLKTGKQKLRLW 144 (770)
Q Consensus 129 d~~~~Lr~G~~~L~lw 144 (770)
+-...-..|.+.+.+-
T Consensus 96 ~l~~~~~~~~~~~~L~ 111 (132)
T 3pyc_A 96 AISRLKDTGYQRLDLC 111 (132)
T ss_dssp HHHHHTTSCCEEEECB
T ss_pred HhhcccccCcEEEeee
Confidence 4322223455555543
No 46
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=93.38 E-value=0.38 Score=50.29 Aligned_cols=74 Identities=20% Similarity=0.279 Sum_probs=54.4
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEe-eec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTIL-LFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~-LFd 129 (770)
.+|-||.+.+..+++ ...+|..+.-..++.|||.+.|++...+|.. ..|.|+|||...-++...+|.+.++ +++
T Consensus 40 ~~dPyv~v~l~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~-~~L~~~V~d~d~~~~~~~iG~~~i~~l~~ 114 (296)
T 1dqv_A 40 FSDPYVKIYLLPDRK---KKFQTKVHRKTLNPIFNETFQFSVPLAELAQ-RKLHFSVYDFDRFSRHDLIGQVVLDNLLE 114 (296)
T ss_dssp CCCEEEEEECTTSTT---SCEECCCCCSCSSCEEEEEEEEECCGGGGSS-CCCEEEEEECCSSSCCCEEEEEECCCTTG
T ss_pred CcCeEEEEEEEcCCC---eeEeCCccCCCCCCcEeeEEEEEecHHHhcC-CEEEEEEEEcCCCCCCceEEEEEeccccc
Confidence 467799987764443 2335655444456899999999988777753 6899999998765567799999985 443
No 47
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=93.33 E-value=0.17 Score=49.05 Aligned_cols=66 Identities=17% Similarity=0.216 Sum_probs=46.8
Q ss_pred CCceEEEEEEEeCCcccccceeeccc-cCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeecc
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLE-SMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~-~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd~ 130 (770)
.+|-||.++ +. ...|+.. .-..++.|||.+.|++. ..+..|.|+|||.. ..+...+|.+.++|=+-
T Consensus 31 ~~DPYV~v~---~~-----~~kt~~~~~~t~nP~WnE~f~f~v~----~~~~~L~~~V~D~d-~~~dd~iG~~~i~L~~l 97 (167)
T 2cjs_A 31 KFNTYVTLK---VQ-----NVESTTIAVRGSQPSWEQDFMFEIN----RLDLGLTVEVWNKG-LIWDTMVGTVWIPLRTI 97 (167)
T ss_dssp GCEEEEEEE---ET-----TEEEECCCEESSSCEEEEEEEEECC----CTTSEEEEEEEECC-SSCCEEEEEEEEEGGGS
T ss_pred CCCeEEEEE---ec-----ceEEEEecCCCCCCCCCCEEEEEee----CCCCEEEEEEEECC-CCCCceEEEEEEEHHHh
Confidence 467799988 11 1233221 12346889999999987 24567999999987 55677999999999653
No 48
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=92.08 E-value=0.64 Score=44.36 Aligned_cols=107 Identities=8% Similarity=0.132 Sum_probs=77.1
Q ss_pred CCeEEEEEeecCCCCCCCCCCCcCCCCCCCCCCcCCCCceEEEEEEEe-CCcccccceeeccccC--CCCccccccEEec
Q 004173 16 LPVKFRVDRLEGTLPSIKSPNSVNDRSGISSTTEERRPELYVECALYI-DGAPFGLPMRTRLESM--GPMYCWNEPITLS 92 (770)
Q Consensus 16 ~~~~~ki~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~l~~-~~~~l~~p~~T~~~~~--~~~~~Wnewl~fp 92 (770)
..++|+|..+ |-+. + ....+-++++.|.+ .|+.++.+-.|+-.+- .+...||..+.+.
T Consensus 14 t~l~v~Ie~i-glkd----a--------------~~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lq 74 (152)
T 2qzq_A 14 TLLTLTIEKI-GLKD----A--------------GQCIDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVDVEIQ 74 (152)
T ss_dssp CEEEEEEEEE-ECTT----G--------------GGCEEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEEEECS
T ss_pred eEEEEEEEEE-EeCC----H--------------HHccCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeEEEee
Confidence 3578888888 5322 1 11245699999996 7888887766765422 2346689999999
Q ss_pred ccccCcCccCceEEEEEeecCCCCce-eEeEEEEeeecccccccccceeEEeec
Q 004173 93 TKYRDLTAHSQLALTVWDVSCGKDER-LVGGTTILLFNSKMQLKTGKQKLRLWP 145 (770)
Q Consensus 93 i~~~dLP~~a~L~~ti~~~~~~~~~~-~vG~~~~~LFd~~~~Lr~G~~~L~lwp 145 (770)
..+..||.+|.+.|.+-.....++.. ..+|+-+. .| .++.|...+.+..
T Consensus 75 tple~lp~G~aivfElkH~k~kkkk~S~kCw~f~~-~d---~i~~g~~~lElY~ 124 (152)
T 2qzq_A 75 RHLEKLPKGAAIFFEFKHYKPKKRFTSTKCFAFME-MD---EIKPGPIVIELYK 124 (152)
T ss_dssp SCGGGSCTTCEEEEEEEEEETTTTEEEEEEEEEEE-GG---GCCSEEEEECCEE
T ss_pred CcHHHCCCCcEEEEEEEEecccceeeeeeeEEEEE-hh---hcccCceeeehhc
Confidence 99999999999999998876654433 56777666 33 7788998888873
No 49
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=91.31 E-value=0.79 Score=55.08 Aligned_cols=81 Identities=19% Similarity=0.255 Sum_probs=56.1
Q ss_pred CceEEEEEEEeCCccc-ccceeeccccC-CCCcccccc-EEec-ccccCcCccCceEEEEEeecCCCCceeEeEEEEeee
Q 004173 53 PELYVECALYIDGAPF-GLPMRTRLESM-GPMYCWNEP-ITLS-TKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLF 128 (770)
Q Consensus 53 ~~l~V~~~l~~~~~~l-~~p~~T~~~~~-~~~~~Wnew-l~fp-i~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LF 128 (770)
+|-||++.|+.....- ....+|..+.- +-++.|||- ++|+ |.+.+| |.|.|+|||.. ...+|+++++|
T Consensus 667 ~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pel---a~Lrf~V~D~d----ddfiG~~~ipL- 738 (816)
T 3qr0_A 667 ISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDL---AVVRIIVSEEN----GKFIGHRVMPL- 738 (816)
T ss_dssp CCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGG---CEEEEEEEETT----SCEEEEEEEES-
T ss_pred CCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCc---cEEEEEEEecC----CCeeeEEEEEH-
Confidence 6779999998321100 01224554332 234789997 9999 865554 79999999953 45899999998
Q ss_pred cccccccccceeEEee
Q 004173 129 NSKMQLKTGKQKLRLW 144 (770)
Q Consensus 129 d~~~~Lr~G~~~L~lw 144 (770)
..|++|...+.+.
T Consensus 739 ---~~L~~GyR~vpL~ 751 (816)
T 3qr0_A 739 ---DGIKPGYRHVPLR 751 (816)
T ss_dssp ---TTCCCEEEEEEEE
T ss_pred ---HHcCCcceEEEEe
Confidence 5789998877764
No 50
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=90.86 E-value=0.95 Score=54.80 Aligned_cols=82 Identities=17% Similarity=0.299 Sum_probs=55.2
Q ss_pred CCceEEEEEEEeCCcccccceeeccccC-CCCccccc-cEEec-ccccCcCccCceEEEEEeecCCCCceeEeEEEEeee
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESM-GPMYCWNE-PITLS-TKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLF 128 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~-~~~~~Wne-wl~fp-i~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LF 128 (770)
.+|-||++.|+.....-....+|..+.- +.++.||| .++|+ |.+ |-.|.|.|+|||.. ...+|.++++|
T Consensus 741 ~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~---pela~Lrf~V~D~d----ddfiG~~~lpL- 812 (885)
T 3ohm_B 741 KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVL---PTLASLRIAAFEEG----GKFVGHRILPV- 812 (885)
T ss_dssp CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESC---GGGCEEEEEEEETT----TEEEEEEEEET-
T ss_pred CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEc---CCcCEEEEEEEcCC----ccEEeeEEEEH-
Confidence 3678999999731100001134544332 23478999 79999 754 44568999999953 46899999998
Q ss_pred cccccccccceeEEee
Q 004173 129 NSKMQLKTGKQKLRLW 144 (770)
Q Consensus 129 d~~~~Lr~G~~~L~lw 144 (770)
..|++|...+.|.
T Consensus 813 ---~~L~~GyR~vpL~ 825 (885)
T 3ohm_B 813 ---SAIRSGYHYVCLR 825 (885)
T ss_dssp ---TTCCCEEEEEEEE
T ss_pred ---HHcCCCceEEEec
Confidence 4688898877663
No 51
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=90.55 E-value=1.2 Score=53.50 Aligned_cols=81 Identities=25% Similarity=0.370 Sum_probs=55.5
Q ss_pred CCceEEEEEEEeC-Ccccccceeec-cccC-CCCccccc-cEEe-cccccCcCccCceEEEEEeecCCCCceeEeEEEEe
Q 004173 52 RPELYVECALYID-GAPFGLPMRTR-LESM-GPMYCWNE-PITL-STKYRDLTAHSQLALTVWDVSCGKDERLVGGTTIL 126 (770)
Q Consensus 52 ~~~l~V~~~l~~~-~~~l~~p~~T~-~~~~-~~~~~Wne-wl~f-pi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~ 126 (770)
.+|-||++.|+.. +... ...+|. .+.- +-++.||| .++| +|...+ -|.|.|+|||.. ...+|++.++
T Consensus 694 ~~DPYV~V~l~g~p~d~~-~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~e---l~~Lr~~V~D~d----~d~iG~~~ip 765 (799)
T 2zkm_X 694 SVRTYVEVELFGLPGDPK-RRYRTKLSPSTNSINPVWKEEPFVFEKILMPE---LASLRVAVMEEG----NKFLGHRIIP 765 (799)
T ss_dssp CCCEEEEEEEECCTTSCC-CCEECCCCSSSCCSSCBCCCCCEEEEEESSGG---GCEEEEEEEETT----TEEEEEEEEE
T ss_pred CCCcEEEEEEEecCCCcc-cceeecccccCCCCCCeeecceEEEEEEccCC---ccEEEEEEEEeC----CCccceEeee
Confidence 3677999999831 1110 123455 3321 23578999 7999 786544 468999999963 4689999999
Q ss_pred eecccccccccceeEEee
Q 004173 127 LFNSKMQLKTGKQKLRLW 144 (770)
Q Consensus 127 LFd~~~~Lr~G~~~L~lw 144 (770)
| ..|++|...+.+-
T Consensus 766 l----~~L~~G~r~v~L~ 779 (799)
T 2zkm_X 766 I----NALNSGYHHLCLH 779 (799)
T ss_dssp G----GGBCCEEEEEEEE
T ss_pred h----hhcCCCcEEEecc
Confidence 8 5688998777663
No 52
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=89.70 E-value=1.4 Score=49.41 Aligned_cols=69 Identities=20% Similarity=0.192 Sum_probs=50.4
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
.+|-||.+.+ +++ ...|..+.-+.++.|||.+.|++. -+....|.|+|||....++...+|.++++|=+
T Consensus 407 ~sdpyv~v~~--~~~----~~~T~~~~~t~nP~w~e~f~f~~~---~~~~~~l~~~v~d~d~~~~~d~lG~~~~~l~~ 475 (510)
T 3jzy_A 407 KSNPYCEISM--GSQ----SYTTRTIQDTLNPKWNFNCQFFIK---DLYQDVLCLTLFDRDQFSPDDFLGRTEIPVAK 475 (510)
T ss_dssp CCCEEEEEEE--TTE----EEECCCCSSCSSCEEEEEEEEEES---CTTTCEEEEEEEECCSSSSCCEEEEEEEEHHH
T ss_pred CCCeEEEEEE--CCe----eccCCccCCCCCCccCceEEEEec---CCCCCEEEEEEEeCCCCCCCCceEEEEEEHHH
Confidence 4677888876 442 235555444556889999999874 33457899999998766667799999999854
No 53
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=89.15 E-value=1.3 Score=50.83 Aligned_cols=84 Identities=20% Similarity=0.375 Sum_probs=58.5
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec--
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN-- 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd-- 129 (770)
.+|-||.+.+ +++ ..+|..+.-..++.|||.+.|++. +++....|.|.|||.....+...+|.+.++|-.
T Consensus 413 ~sDPYV~v~l--~~~----~~kTkvik~tlNP~Wne~f~f~~~--~~~~~~~L~~~V~D~D~~~~dD~LG~~~~~L~~g~ 484 (540)
T 3nsj_A 413 ATDAYLKVFF--GGQ----EFRTGVVWNNNNPRWTDKMDFENV--LLSTGGPLRVQVWDADYGWDDDLLGSCDRSPHSGF 484 (540)
T ss_dssp CCCEEEEEEE--TTE----EEECCCBCSCSSCBCCCCEEEEEE--ETTTCCCEEEEEEECCSSSCCEEEEEEEECCCSEE
T ss_pred CcCeEEEEEE--CCE----eeeeeeecCCCCCCCCeEEEEEEe--cCCCCCEEEEEEEECCCCCCCCEEEEEEEEeeCCc
Confidence 4777998776 443 256655444456889999999843 445788999999998776666789999988752
Q ss_pred --ccccccccceeEEe
Q 004173 130 --SKMQLKTGKQKLRL 143 (770)
Q Consensus 130 --~~~~Lr~G~~~L~l 143 (770)
....|..|...+.+
T Consensus 485 ~~~~~~l~~G~l~~~~ 500 (540)
T 3nsj_A 485 HEVTCELNHGRVKFSY 500 (540)
T ss_dssp EEEEEECSSSEEEEEE
T ss_pred EEEEEEcCCeEEEEEE
Confidence 12346666655543
No 54
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=88.90 E-value=1.9 Score=40.82 Aligned_cols=70 Identities=11% Similarity=0.224 Sum_probs=51.3
Q ss_pred CceEEEEEEEeCCcccccceeecccc-CCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 53 PELYVECALYIDGAPFGLPMRTRLES-MGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 53 ~~l~V~~~l~~~~~~l~~p~~T~~~~-~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
+|=++++.. .| ...+|...- -...+.|||-++||+.. .|-.+..|++.||++..-.....||.+.++|-+
T Consensus 37 ~Dp~akv~F--Rg----~k~kTkvi~~~~~npvfnE~F~wpl~~-~ld~~e~L~v~V~d~~~v~~nrlIG~~~i~Lq~ 107 (144)
T 3l9b_A 37 ADRIAKVTF--RG----QSFYSRVLENCEDVADFDETFRWPVAS-SIDRNEVLEIQIFNYSKVFSNKLIGTFRMVLQK 107 (144)
T ss_dssp EEEEEEEEE--TT----EEEECCCEEEECSCEEEEEEEEEEESS-CCCTTCEEEEEEEEECTTSCCEEEEEEEEESHH
T ss_pred CCCeEEEEE--ec----cceeeEEeccCCCCceEcceEEecCCC-CCCCCCEEEEEEEECccccCCCEEEEEEEEhHH
Confidence 444666554 12 233444332 23457899999999997 888889999999999876677899999999974
No 55
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=78.01 E-value=3.9 Score=47.85 Aligned_cols=74 Identities=19% Similarity=0.261 Sum_probs=54.4
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeee
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLF 128 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LF 128 (770)
.+|-||.+.+..+++.. ...+|+...-+.++.|||...|++.-.+. +..|.|+|||....+....+|.+.++|-
T Consensus 192 ~sDPyvkv~l~p~~~~~-~k~kT~v~~~tlnP~wne~f~f~~~~~~~--~~~L~v~v~d~d~~~~dd~iG~~~i~l~ 265 (674)
T 3pfq_A 192 LSDPYVKLKLIPDPKSE-SKQKTKTIKSSLNPEWNETFRFQLKESDK--DRRLSVEIWDWDLTSRNDFMGSLSFGIS 265 (674)
T ss_dssp SCCEEEEEEEESCSSCC-SCEECCCCSSCSSCEEEEEEEEECCSTTT--TCEEEEEEEECCSSSCCEECCBCCCBTT
T ss_pred ccCcccccccccCcccc-ccccccccccccCCCccceeeeecccCCc--cceeeeEEeecccccccccccccccchh
Confidence 46779999987655432 23355555445568899999999877664 4469999999887667778999988874
No 56
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=73.06 E-value=3.6 Score=48.92 Aligned_cols=71 Identities=21% Similarity=0.242 Sum_probs=51.5
Q ss_pred CCceEEEEEEEeCCcccccceeeccccCCCCccccccEEecccccCcCccCceEEEEEeecCCCCceeEeEEEEeeec
Q 004173 52 RPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFN 129 (770)
Q Consensus 52 ~~~l~V~~~l~~~~~~l~~p~~T~~~~~~~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~~~~~~~~~vG~~~~~LFd 129 (770)
.+|-||.+.+-.+.. ...+|+.+.-...+.|||.+.|++.- +..+.|.|+|||...-+ ...+|.+.++|-+
T Consensus 41 ~sDPYV~V~l~~~~~---~k~kTkvik~tlNPvWNEtF~F~v~~---~~~~~L~~~V~D~D~~~-ddfIG~v~I~L~~ 111 (749)
T 1cjy_A 41 TPDPYVELFISTTPD---SRKRTRHFNNDINPVWNETFEFILDP---NQENVLEITLMDANYVM-DETLGTATFTVSS 111 (749)
T ss_dssp CCCEEEEEECTTSTT---CCEECCCCTTCSSCEEEEEEEEEECT---TSCCBCEEEEEECCSSS-CEEEEEECCBSTT
T ss_pred CcCeEEEEEEecCCC---CeEecceEcCCCCCeeeeEEEEEecC---CCCCEEEEEEEECCCCC-CceeEEEEEEHHH
Confidence 467799887642211 23456655445568899999999764 35678999999987655 7799999999865
No 57
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=52.38 E-value=3.5 Score=46.39 Aligned_cols=67 Identities=21% Similarity=0.289 Sum_probs=5.8
Q ss_pred ceEEEEEEEeCCcccccceeeccccCC---CCccccccEEecccccCcCccCceEEEEEee-c---CCCCceeEeEEEEe
Q 004173 54 ELYVECALYIDGAPFGLPMRTRLESMG---PMYCWNEPITLSTKYRDLTAHSQLALTVWDV-S---CGKDERLVGGTTIL 126 (770)
Q Consensus 54 ~l~V~~~l~~~~~~l~~p~~T~~~~~~---~~~~Wnewl~fpi~~~dLP~~a~L~~ti~~~-~---~~~~~~~vG~~~~~ 126 (770)
|-||.+.+ +++.. .+|+.+.-+ ..+.|||..+|++. |..+.|.|+|||- . ...+...+|.+.++
T Consensus 28 dpYv~v~l--~~~~~---~kT~v~~kt~~glnP~WnE~F~f~~~----~~~~~L~v~V~d~~d~~~~~~~d~~lG~v~i~ 98 (483)
T 3bxj_A 28 RYYCELCL--DDMLY---ARTTSKPRSASGDTVFWGEHFEFNNL----PAVRALRLHLYRDSDKKRKKDKAGYVGLVTVP 98 (483)
T ss_dssp ------------------------------------CCEECC--------------------------------------
T ss_pred CCeEEEEE--CCeEE---eeeeEEeCCCCCCCCccccEEEEecC----CCccEEEEEEEecCCccccCCCCceEEEEEEE
Confidence 44666554 34322 245444333 46889999999962 5568999999994 2 12345689999999
Q ss_pred eec
Q 004173 127 LFN 129 (770)
Q Consensus 127 LFd 129 (770)
+=+
T Consensus 99 l~~ 101 (483)
T 3bxj_A 99 VAT 101 (483)
T ss_dssp ---
T ss_pred HHH
Confidence 854
No 58
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=44.23 E-value=34 Score=32.24 Aligned_cols=75 Identities=21% Similarity=0.198 Sum_probs=40.0
Q ss_pred chhhHhhhhccccCCCHHHHHHHHHHhcccCCC-CHhhhhhccCCCCCCHHHHHHHHHHHhcCChhHHHHhHHHHHHHhh
Q 004173 322 EKRALTKFLRSVEWSDVQEAKQALELMGRWEMI-DVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 400 (770)
Q Consensus 322 ~~~aL~k~L~sv~W~~~~e~~~a~~LL~~W~~i-~~~dALeLL~~~f~~~~VR~yAV~~L~~~~d~eL~~yLlQLVQaLk 400 (770)
.+.+++.++...+-.++.-...|...|...... ....-+++|.. +|+.||..|+..|..+.+.+ .++.|++.|+
T Consensus 74 ~~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~d--~~~~vr~~a~~aL~~~~~~~---~~~~L~~~l~ 148 (201)
T 3ltj_A 74 DERAVEPLIKALKDEDGWVRQSAAVALGQIGDERAVEPLIKALKD--EDWFVRIAAAFALGEIGDER---AVEPLIKALK 148 (201)
T ss_dssp CGGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGGGHHHHHHHTTC--SSHHHHHHHHHHHHHHTCGG---GHHHHHHHTT
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHcC--CCHHHHHHHHHHHHHhCCHH---HHHHHHHHHc
Confidence 355666666655544544444455555444332 22233344432 36777888877777666654 3445555565
Q ss_pred c
Q 004173 401 F 401 (770)
Q Consensus 401 y 401 (770)
-
T Consensus 149 d 149 (201)
T 3ltj_A 149 D 149 (201)
T ss_dssp C
T ss_pred C
Confidence 3
No 59
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=34.52 E-value=41 Score=32.00 Aligned_cols=73 Identities=22% Similarity=0.278 Sum_probs=31.8
Q ss_pred hhhHhhhhccccCCCHHHHHHHHHHhcccCCC-CHhhhhhccCCCCCCHHHHHHHHHHHhcCChhHHHHhHHHHHHHhh
Q 004173 323 KRALTKFLRSVEWSDVQEAKQALELMGRWEMI-DVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 400 (770)
Q Consensus 323 ~~aL~k~L~sv~W~~~~e~~~a~~LL~~W~~i-~~~dALeLL~~~f~~~~VR~yAV~~L~~~~d~eL~~yLlQLVQaLk 400 (770)
+.+++.++..+.=.++.-...|...|...... ....-+++|.. +|+.||..|+..|..+.+.+ .++.|+++|+
T Consensus 49 ~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~~--~~~~vr~~a~~aL~~~~~~~---~~~~L~~~l~ 122 (211)
T 3ltm_A 49 ERAVEPLIKALKDEDAWVRRAAADALGQIGDERAVEPLIKALKD--EDGWVRQSAAVALGQIGDER---AVEPLIKALK 122 (211)
T ss_dssp GGGHHHHHHHTTCSCHHHHHHHHHHHHHHCCGGGHHHHHHHTTC--SSHHHHHHHHHHHHHHCCGG---GHHHHHHHTT
T ss_pred ccHHHHHHHHHcCCCHHHHHHHHHHHHhhCCHHHHHHHHHHHcC--CCHHHHHHHHHHHHHhCcHH---HHHHHHHHHh
Confidence 44555555444323333333344444433221 11222233322 35566666666665555543 2344455553
No 60
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=31.01 E-value=74 Score=30.11 Aligned_cols=74 Identities=22% Similarity=0.204 Sum_probs=38.5
Q ss_pred chhhHhhhhccccCCCHHHHHHHHHHhcccCCC-CHhhhhhccCCCCCCHHHHHHHHHHHhcCChhHHHHhHHHHHHHhh
Q 004173 322 EKRALTKFLRSVEWSDVQEAKQALELMGRWEMI-DVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALR 400 (770)
Q Consensus 322 ~~~aL~k~L~sv~W~~~~e~~~a~~LL~~W~~i-~~~dALeLL~~~f~~~~VR~yAV~~L~~~~d~eL~~yLlQLVQaLk 400 (770)
.+.+++.+++.++=.++.-...|...|..-... ....-+++|. =+++.||..|+..|..+.+.+ .++.|++.|+
T Consensus 79 ~~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~--d~~~~vr~~a~~aL~~~~~~~---~~~~L~~~l~ 153 (211)
T 3ltm_A 79 DERAVEPLIKALKDEDGWVRQSAAVALGQIGDERAVEPLIKALK--DEDWFVRIAAAFALGEIGDER---AVEPLIKALK 153 (211)
T ss_dssp CGGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGGGHHHHHHHTT--CSSHHHHHHHHHHHHHHCCGG---GHHHHHHHTT
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHh--CCCHHHHHHHHHHHHHcCCHH---HHHHHHHHHc
Confidence 355666665555444444334444444433222 1222233342 246778888888887776655 3455555564
No 61
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=30.22 E-value=52 Score=30.94 Aligned_cols=75 Identities=23% Similarity=0.267 Sum_probs=46.0
Q ss_pred hhhHhhhhccccCCCHHHHHHHHHHhcccCCC-CHhhhhhccCCCCCCHHHHHHHHHHHhcCChhHHHHhHHHHHHHhhc
Q 004173 323 KRALTKFLRSVEWSDVQEAKQALELMGRWEMI-DVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALRF 401 (770)
Q Consensus 323 ~~aL~k~L~sv~W~~~~e~~~a~~LL~~W~~i-~~~dALeLL~~~f~~~~VR~yAV~~L~~~~d~eL~~yLlQLVQaLky 401 (770)
+.+++.+++...=.++.-...|...|...... ....-+++|.. +++.||..|+..|..+.+.+ .++.|+++|+-
T Consensus 44 ~~~~~~L~~~l~~~~~~vr~~a~~~L~~~~~~~~~~~L~~~l~d--~~~~vr~~a~~aL~~~~~~~---~~~~L~~~l~d 118 (201)
T 3ltj_A 44 ERAVEPLIKALKDEDAWVRRAAADALGQIGDERAVEPLIKALKD--EDGWVRQSAAVALGQIGDER---AVEPLIKALKD 118 (201)
T ss_dssp GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGGGHHHHHHHTTC--SSHHHHHHHHHHHHHHCCGG---GHHHHHHHTTC
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHhhCCHHHHHHHHHHHcC--CCHHHHHHHHHHHHHhCcHH---HHHHHHHHHcC
Confidence 45666666655433444444555555544332 23333455543 57999999999998887765 55667778864
Q ss_pred c
Q 004173 402 E 402 (770)
Q Consensus 402 E 402 (770)
+
T Consensus 119 ~ 119 (201)
T 3ltj_A 119 E 119 (201)
T ss_dssp S
T ss_pred C
Confidence 3
No 62
>2do9_A NALP10, nacht-, LRR- and PYD-containing protein 10; apoptosis, inflammation, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=25.01 E-value=27 Score=31.64 Aligned_cols=76 Identities=14% Similarity=0.181 Sum_probs=56.0
Q ss_pred HHHHHHHHcCCCCCCCCHHHHHHHHHhHHHhhhchhhHhhhhccccCCCHHHHHHHHHHhcccCCCCHhhhhhccCCCCC
Q 004173 289 RKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFE 368 (770)
Q Consensus 289 ~~~L~~i~~~~p~~~Lt~~ek~llW~~R~~l~~~~~aL~k~L~sv~W~~~~e~~~a~~LL~~W~~i~~~dALeLL~~~f~ 368 (770)
+..|...+. .|+++| +++|+.+|.+.+ ...|.|...+. .++.|--.||...|.
T Consensus 17 ~~~Ll~~Le-----~L~~eE---lkkFK~~L~~~~------~~~Ip~~~le~-------------Ad~~dLa~lLv~~y~ 69 (115)
T 2do9_A 17 QEALLWALN-----DLEENS---FKTLKFHLRDVT------QFHLARGELES-------------LSQVDLASKLISMYG 69 (115)
T ss_dssp HHHHHHHHH-----HSCHHH---HHHHHHHHHHHH------CSSCCSSSTTT-------------CCTTHHHHHHHHHTC
T ss_pred HHHHHHHHH-----HcCHHH---HHHHHHHHccCc------CCCCChhhccc-------------CCHHHHHHHHHHHcC
Confidence 455554443 567766 899999998755 56788887433 277777888888898
Q ss_pred CHHHHHHHHHHHhcCChhHHHHh
Q 004173 369 SEEVRAYAVCILERADDDELQCY 391 (770)
Q Consensus 369 ~~~VR~yAV~~L~~~~d~eL~~y 391 (770)
-......+++.+++++-.+|..-
T Consensus 70 e~~A~~vt~~If~~mn~~dLae~ 92 (115)
T 2do9_A 70 AQEAVRVVSRSLLAMNLMELVDY 92 (115)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCHHHHHHH
Confidence 88888899999998887666543
Done!