Query 004178
Match_columns 770
No_of_seqs 464 out of 2488
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 16:46:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004178.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004178hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3htx_A HEN1; HEN1, small RNA m 100.0 1E-197 5E-202 1705.1 48.0 721 1-765 183-943 (950)
2 3jwg_A HEN1, methyltransferase 100.0 4.7E-28 1.6E-32 239.6 21.5 202 512-737 10-211 (219)
3 3jwh_A HEN1; methyltransferase 100.0 3.1E-27 1E-31 233.9 22.2 200 514-737 12-211 (217)
4 2p7i_A Hypothetical protein; p 99.7 5.1E-16 1.8E-20 153.8 17.2 168 519-718 29-201 (250)
5 1vl5_A Unknown conserved prote 99.7 3.7E-16 1.3E-20 158.5 15.4 161 518-712 24-185 (260)
6 3ujc_A Phosphoethanolamine N-m 99.7 2.4E-16 8.1E-21 158.7 13.1 128 510-653 34-162 (266)
7 3hnr_A Probable methyltransfer 99.7 1.1E-15 3.7E-20 150.5 16.1 165 521-717 35-201 (220)
8 3h2b_A SAM-dependent methyltra 99.7 7.1E-16 2.4E-20 150.3 14.2 139 532-716 42-181 (203)
9 3l8d_A Methyltransferase; stru 99.7 2.1E-15 7.2E-20 150.3 17.8 155 521-717 45-201 (242)
10 4gek_A TRNA (CMO5U34)-methyltr 99.7 1.2E-15 3.9E-20 158.5 16.4 127 514-653 51-181 (261)
11 3dtn_A Putative methyltransfer 99.6 2.7E-15 9.2E-20 149.3 17.6 174 514-712 26-209 (234)
12 1nkv_A Hypothetical protein YJ 99.6 7.5E-16 2.6E-20 155.0 13.2 126 511-652 16-142 (256)
13 1pjz_A Thiopurine S-methyltran 99.6 7.6E-16 2.6E-20 152.6 12.7 125 525-652 16-142 (203)
14 1xtp_A LMAJ004091AAA; SGPP, st 99.6 4.4E-15 1.5E-19 149.0 18.0 150 522-713 84-234 (254)
15 1xxl_A YCGJ protein; structura 99.6 2.3E-15 7.9E-20 151.5 15.7 157 522-712 12-169 (239)
16 3e23_A Uncharacterized protein 99.6 3.5E-15 1.2E-19 146.5 16.3 155 531-736 43-201 (211)
17 3ou2_A SAM-dependent methyltra 99.6 4.9E-15 1.7E-19 144.7 16.6 164 522-717 36-205 (218)
18 3dli_A Methyltransferase; PSI- 99.6 2.3E-15 7.8E-20 151.2 14.4 137 530-712 40-179 (240)
19 4htf_A S-adenosylmethionine-de 99.6 6.7E-15 2.3E-19 151.4 17.8 161 531-717 68-233 (285)
20 3dh0_A SAM dependent methyltra 99.6 3.9E-15 1.3E-19 146.4 15.0 149 521-712 27-176 (219)
21 1y8c_A S-adenosylmethionine-de 99.6 8E-15 2.7E-19 145.5 17.2 124 514-654 18-146 (246)
22 3g5l_A Putative S-adenosylmeth 99.6 8.3E-15 2.9E-19 147.7 16.6 115 520-653 33-148 (253)
23 2ex4_A Adrenal gland protein A 99.6 1.7E-14 5.9E-19 144.9 18.5 142 531-713 79-221 (241)
24 2xvm_A Tellurite resistance pr 99.6 9.3E-15 3.2E-19 140.8 14.8 114 522-651 23-137 (199)
25 2gb4_A Thiopurine S-methyltran 99.6 8.3E-15 2.8E-19 151.3 15.3 129 519-652 56-193 (252)
26 3bus_A REBM, methyltransferase 99.6 1.6E-14 5.3E-19 147.1 16.6 120 518-652 48-168 (273)
27 3ofk_A Nodulation protein S; N 99.6 9.5E-15 3.3E-19 143.6 14.5 122 514-653 33-157 (216)
28 2o57_A Putative sarcosine dime 99.6 9.3E-15 3.2E-19 151.0 14.8 122 517-653 64-190 (297)
29 3kkz_A Uncharacterized protein 99.6 6.8E-15 2.3E-19 150.0 13.1 125 512-652 26-152 (267)
30 3g07_A 7SK snRNA methylphospha 99.6 1.5E-15 5.1E-20 158.7 8.2 186 531-737 46-288 (292)
31 3lcc_A Putative methyl chlorid 99.6 7.2E-14 2.5E-18 139.6 19.9 158 531-735 66-225 (235)
32 1kpg_A CFA synthase;, cyclopro 99.6 3.3E-14 1.1E-18 146.1 17.7 120 519-654 52-172 (287)
33 3f4k_A Putative methyltransfer 99.6 7.4E-15 2.5E-19 147.9 12.4 123 514-652 28-152 (257)
34 2yqz_A Hypothetical protein TT 99.6 2.2E-14 7.5E-19 144.3 15.7 104 528-649 36-140 (263)
35 3vc1_A Geranyl diphosphate 2-C 99.6 9E-15 3.1E-19 153.3 13.1 124 514-653 99-224 (312)
36 3dlc_A Putative S-adenosyl-L-m 99.6 1.5E-14 5.2E-19 140.7 13.7 129 510-654 23-152 (219)
37 3bkw_A MLL3908 protein, S-aden 99.6 2.5E-14 8.5E-19 142.3 15.5 113 522-653 34-147 (243)
38 3hem_A Cyclopropane-fatty-acyl 99.6 8.9E-14 3.1E-18 144.7 18.7 120 519-654 60-187 (302)
39 3g2m_A PCZA361.24; SAM-depende 99.6 2.2E-14 7.6E-19 149.0 14.0 119 520-655 72-195 (299)
40 3cc8_A Putative methyltransfer 99.6 5.3E-14 1.8E-18 137.9 15.9 160 522-718 24-187 (230)
41 2kw5_A SLR1183 protein; struct 99.6 5.4E-14 1.8E-18 136.8 15.8 135 534-713 32-167 (202)
42 4hg2_A Methyltransferase type 99.6 8.2E-15 2.8E-19 152.0 10.6 110 517-652 27-137 (257)
43 2gs9_A Hypothetical protein TT 99.5 4.7E-14 1.6E-18 138.2 14.5 132 531-701 36-170 (211)
44 3thr_A Glycine N-methyltransfe 99.5 1.2E-14 4.2E-19 149.6 10.5 126 519-655 45-180 (293)
45 3ccf_A Cyclopropane-fatty-acyl 99.5 5.5E-14 1.9E-18 144.4 15.2 110 522-654 48-158 (279)
46 3i9f_A Putative type 11 methyl 99.5 1.9E-14 6.4E-19 136.4 10.5 135 522-712 8-143 (170)
47 3sm3_A SAM-dependent methyltra 99.5 1.1E-13 3.9E-18 136.2 16.4 114 531-654 30-145 (235)
48 3pfg_A N-methyltransferase; N, 99.5 7.8E-14 2.7E-18 141.6 15.5 113 517-650 34-151 (263)
49 2p35_A Trans-aconitate 2-methy 99.5 3.2E-14 1.1E-18 143.1 12.3 156 522-713 24-186 (259)
50 3cgg_A SAM-dependent methyltra 99.5 3.6E-13 1.2E-17 128.4 18.7 103 530-652 45-149 (195)
51 3m70_A Tellurite resistance pr 99.5 8.2E-14 2.8E-18 143.4 15.2 110 525-651 114-224 (286)
52 3bxo_A N,N-dimethyltransferase 99.5 6.1E-14 2.1E-18 139.1 13.0 103 530-653 39-144 (239)
53 3d2l_A SAM-dependent methyltra 99.5 2.6E-13 8.9E-18 134.9 17.3 118 516-653 20-140 (243)
54 3e8s_A Putative SAM dependent 99.5 1.5E-13 5E-18 134.5 15.2 156 522-714 43-206 (227)
55 1ri5_A MRNA capping enzyme; me 99.5 2E-13 6.9E-18 139.8 16.2 112 530-654 63-178 (298)
56 3bkx_A SAM-dependent methyltra 99.5 3E-13 1E-17 137.7 17.3 169 519-713 31-215 (275)
57 2fk8_A Methoxy mycolic acid sy 99.5 1.6E-13 5.4E-18 143.6 15.6 122 518-655 77-199 (318)
58 2aot_A HMT, histamine N-methyl 99.5 2.7E-13 9.3E-18 140.8 15.8 150 530-713 51-217 (292)
59 2p8j_A S-adenosylmethionine-de 99.5 9.3E-14 3.2E-18 135.3 11.2 108 530-653 22-131 (209)
60 3ggd_A SAM-dependent methyltra 99.5 7.5E-14 2.6E-18 140.1 10.6 159 530-717 55-219 (245)
61 3ocj_A Putative exported prote 99.5 4.6E-13 1.6E-17 140.0 17.0 113 529-653 116-230 (305)
62 3gu3_A Methyltransferase; alph 99.5 2.4E-13 8.1E-18 140.7 14.6 117 520-652 10-128 (284)
63 3mgg_A Methyltransferase; NYSG 99.5 1.7E-13 5.8E-18 139.9 11.8 111 528-653 34-145 (276)
64 1vlm_A SAM-dependent methyltra 99.5 1E-12 3.4E-17 130.4 16.9 147 515-712 34-183 (219)
65 1ve3_A Hypothetical protein PH 99.5 3.3E-13 1.1E-17 132.8 13.3 107 531-653 38-145 (227)
66 4e2x_A TCAB9; kijanose, tetron 99.5 8.6E-14 2.9E-18 151.5 9.7 153 520-713 96-249 (416)
67 3ege_A Putative methyltransfer 99.5 1.2E-13 4E-18 141.1 9.9 112 518-653 21-133 (261)
68 2i62_A Nicotinamide N-methyltr 99.5 1E-12 3.5E-17 132.3 16.7 121 530-652 55-200 (265)
69 3g5t_A Trans-aconitate 3-methy 99.5 3E-13 1E-17 140.5 13.1 116 519-648 25-147 (299)
70 1wzn_A SAM-dependent methyltra 99.4 5.6E-13 1.9E-17 134.0 13.6 117 520-653 27-148 (252)
71 4fsd_A Arsenic methyltransfera 99.4 2.5E-13 8.5E-18 147.4 11.4 119 529-653 81-206 (383)
72 2pxx_A Uncharacterized protein 99.4 4.3E-13 1.5E-17 130.3 11.8 108 530-653 41-162 (215)
73 3iv6_A Putative Zn-dependent a 99.4 8E-13 2.7E-17 138.1 13.9 121 518-655 32-153 (261)
74 1dus_A MJ0882; hypothetical pr 99.4 1.1E-12 3.6E-17 125.0 13.6 118 520-654 41-161 (194)
75 3lbf_A Protein-L-isoaspartate 99.4 6.2E-13 2.1E-17 130.3 12.2 110 520-652 66-176 (210)
76 2vdw_A Vaccinia virus capping 99.4 4.2E-13 1.4E-17 142.0 11.2 117 531-655 48-174 (302)
77 3p9n_A Possible methyltransfer 99.4 1.3E-12 4.4E-17 126.8 13.1 110 530-654 43-157 (189)
78 2avn_A Ubiquinone/menaquinone 99.4 7.5E-13 2.6E-17 134.8 11.9 102 531-654 54-156 (260)
79 3hm2_A Precorrin-6Y C5,15-meth 99.4 2.4E-12 8.2E-17 122.0 14.4 112 521-652 15-129 (178)
80 2r3s_A Uncharacterized protein 99.4 2E-12 7E-17 135.7 15.3 119 521-653 153-274 (335)
81 4azs_A Methyltransferase WBDD; 99.4 2.5E-13 8.6E-18 155.2 8.9 110 530-654 65-178 (569)
82 3bgv_A MRNA CAP guanine-N7 met 99.4 1E-12 3.6E-17 137.5 12.5 117 531-654 34-159 (313)
83 3mb5_A SAM-dependent methyltra 99.4 1.2E-12 4.1E-17 132.3 12.0 122 513-653 75-197 (255)
84 2a14_A Indolethylamine N-methy 99.4 6.4E-13 2.2E-17 136.4 10.0 121 529-651 53-198 (263)
85 3mcz_A O-methyltransferase; ad 99.4 4.3E-12 1.5E-16 134.8 16.3 161 522-713 169-335 (352)
86 3dp7_A SAM-dependent methyltra 99.4 6.9E-12 2.4E-16 135.0 17.9 109 530-652 178-289 (363)
87 3mti_A RRNA methylase; SAM-dep 99.4 1.9E-12 6.5E-17 124.4 12.1 105 530-650 21-135 (185)
88 3e05_A Precorrin-6Y C5,15-meth 99.4 4.1E-12 1.4E-16 124.4 14.3 114 521-652 30-144 (204)
89 2g72_A Phenylethanolamine N-me 99.4 2.8E-12 9.5E-17 132.6 13.6 127 521-649 59-214 (289)
90 1zx0_A Guanidinoacetate N-meth 99.4 1.8E-12 6.2E-17 130.2 11.0 106 529-649 58-169 (236)
91 2qe6_A Uncharacterized protein 99.4 5.7E-12 2E-16 131.3 15.2 110 530-654 76-200 (274)
92 3mq2_A 16S rRNA methyltransfer 99.4 2.5E-12 8.6E-17 127.0 11.9 157 525-716 21-183 (218)
93 1vbf_A 231AA long hypothetical 99.4 4.4E-12 1.5E-16 126.0 13.4 110 520-654 59-169 (231)
94 2yxe_A Protein-L-isoaspartate 99.4 3.1E-12 1E-16 125.9 12.0 115 520-654 66-181 (215)
95 3njr_A Precorrin-6Y methylase; 99.3 9.1E-12 3.1E-16 123.7 15.1 109 522-652 46-156 (204)
96 1qzz_A RDMB, aclacinomycin-10- 99.3 6.1E-12 2.1E-16 134.5 14.8 115 522-651 173-288 (374)
97 3i53_A O-methyltransferase; CO 99.3 4.8E-12 1.6E-16 133.7 13.7 109 530-653 168-277 (332)
98 2pwy_A TRNA (adenine-N(1)-)-me 99.3 5.6E-12 1.9E-16 126.9 13.0 122 514-653 79-201 (258)
99 1i9g_A Hypothetical protein RV 99.3 3.1E-12 1.1E-16 131.0 10.9 125 514-654 82-207 (280)
100 1x19_A CRTF-related protein; m 99.3 2.8E-11 9.6E-16 129.4 18.5 116 521-651 180-296 (359)
101 3fzg_A 16S rRNA methylase; met 99.3 1.9E-12 6.4E-17 130.3 8.4 120 514-653 34-154 (200)
102 3gwz_A MMCR; methyltransferase 99.3 2.4E-11 8.3E-16 131.0 17.6 116 521-651 192-308 (369)
103 1l3i_A Precorrin-6Y methyltran 99.3 5E-12 1.7E-16 120.2 10.7 118 516-652 18-136 (192)
104 3ntv_A MW1564 protein; rossman 99.3 1.2E-11 4E-16 124.7 13.9 117 515-648 55-174 (232)
105 3evz_A Methyltransferase; NYSG 99.3 6.3E-11 2.2E-15 117.6 18.8 148 530-737 54-221 (230)
106 3orh_A Guanidinoacetate N-meth 99.3 4.5E-12 1.5E-16 128.6 10.3 102 530-648 59-168 (236)
107 2yxd_A Probable cobalt-precorr 99.3 1.2E-11 3.9E-16 117.0 12.4 114 515-652 19-133 (183)
108 1dl5_A Protein-L-isoaspartate 99.3 7.4E-12 2.5E-16 132.3 12.1 116 517-652 61-177 (317)
109 1p91_A Ribosomal RNA large sub 99.3 9.4E-12 3.2E-16 126.7 12.3 119 509-655 64-183 (269)
110 2fca_A TRNA (guanine-N(7)-)-me 99.3 7.7E-12 2.6E-16 124.8 11.4 111 531-654 38-157 (213)
111 1tw3_A COMT, carminomycin 4-O- 99.3 1.7E-11 5.7E-16 130.6 14.7 116 522-652 174-290 (360)
112 1yzh_A TRNA (guanine-N(7)-)-me 99.3 1.2E-11 4.2E-16 122.3 12.6 111 530-653 40-159 (214)
113 3dxy_A TRNA (guanine-N(7)-)-me 99.3 3.8E-12 1.3E-16 128.3 8.8 114 531-657 34-157 (218)
114 4dzr_A Protein-(glutamine-N5) 99.3 1.9E-12 6.6E-17 125.5 5.7 125 514-653 12-168 (215)
115 2ift_A Putative methylase HI07 99.3 7.3E-12 2.5E-16 123.8 9.8 107 531-654 53-167 (201)
116 2ip2_A Probable phenazine-spec 99.3 1.8E-11 6E-16 129.2 13.4 115 521-651 158-273 (334)
117 3eey_A Putative rRNA methylase 99.3 2.1E-11 7.1E-16 118.3 12.6 112 528-650 19-139 (197)
118 2esr_A Methyltransferase; stru 99.3 1.2E-11 4E-16 118.1 10.7 119 520-654 19-142 (177)
119 3tfw_A Putative O-methyltransf 99.3 1.1E-10 3.7E-15 119.2 18.3 114 522-651 54-171 (248)
120 3dr5_A Putative O-methyltransf 99.3 2E-11 6.8E-16 123.3 11.6 101 532-648 57-161 (221)
121 3duw_A OMT, O-methyltransferas 99.3 5.6E-11 1.9E-15 117.7 14.6 116 521-652 48-169 (223)
122 3tr6_A O-methyltransferase; ce 99.3 2.8E-11 9.6E-16 119.8 12.4 114 521-650 54-174 (225)
123 3ckk_A TRNA (guanine-N(7)-)-me 99.3 2.2E-11 7.6E-16 124.2 11.9 121 530-657 45-175 (235)
124 1jg1_A PIMT;, protein-L-isoasp 99.2 2.4E-11 8.1E-16 122.1 11.5 112 521-655 81-194 (235)
125 3grz_A L11 mtase, ribosomal pr 99.2 1.5E-11 5.2E-16 120.2 9.7 102 530-652 59-161 (205)
126 2pbf_A Protein-L-isoaspartate 99.2 2.2E-11 7.6E-16 120.9 10.9 116 522-652 69-195 (227)
127 3fpf_A Mtnas, putative unchara 99.2 3.9E-11 1.3E-15 127.7 13.4 106 525-651 116-223 (298)
128 1i1n_A Protein-L-isoaspartate 99.2 3.4E-11 1.1E-15 119.5 12.1 110 529-653 75-185 (226)
129 2hnk_A SAM-dependent O-methylt 99.2 2.9E-11 1E-15 121.8 11.8 157 520-718 49-223 (239)
130 1ws6_A Methyltransferase; stru 99.2 9E-12 3.1E-16 117.0 7.2 114 521-654 29-151 (171)
131 3u81_A Catechol O-methyltransf 99.2 3.3E-11 1.1E-15 120.0 11.6 122 514-649 41-169 (221)
132 3q7e_A Protein arginine N-meth 99.2 4.1E-11 1.4E-15 128.9 13.0 106 528-647 63-169 (349)
133 2fhp_A Methylase, putative; al 99.2 2.5E-11 8.4E-16 115.9 9.9 120 519-654 31-158 (187)
134 3dmg_A Probable ribosomal RNA 99.2 6.5E-11 2.2E-15 129.5 14.5 114 530-659 232-350 (381)
135 2y1w_A Histone-arginine methyl 99.2 4.3E-11 1.5E-15 128.5 12.7 115 521-650 40-155 (348)
136 1yb2_A Hypothetical protein TA 99.2 2.7E-11 9.3E-16 125.1 10.5 120 514-653 93-214 (275)
137 1o54_A SAM-dependent O-methylt 99.2 5.5E-11 1.9E-15 122.5 12.7 120 514-652 95-215 (277)
138 2fyt_A Protein arginine N-meth 99.2 9.2E-11 3.1E-15 125.8 14.9 111 521-647 54-168 (340)
139 2fpo_A Methylase YHHF; structu 99.2 2.7E-11 9.2E-16 119.8 9.9 115 521-652 43-162 (202)
140 1nt2_A Fibrillarin-like PRE-rR 99.2 5.2E-11 1.8E-15 119.2 12.0 104 528-651 54-162 (210)
141 1xdz_A Methyltransferase GIDB; 99.2 2.8E-11 9.4E-16 122.2 9.9 100 530-648 69-172 (240)
142 2b3t_A Protein methyltransfera 99.2 1.2E-10 4E-15 120.2 14.4 124 514-652 93-240 (276)
143 3lpm_A Putative methyltransfer 99.2 9.9E-11 3.4E-15 119.6 13.7 119 523-654 40-180 (259)
144 1jsx_A Glucose-inhibited divis 99.2 6E-11 2.1E-15 115.7 11.5 99 531-649 65-164 (207)
145 3tma_A Methyltransferase; thum 99.2 6.7E-11 2.3E-15 126.7 12.4 130 512-653 184-320 (354)
146 4dcm_A Ribosomal RNA large sub 99.2 8.2E-11 2.8E-15 128.3 13.0 121 521-652 212-336 (375)
147 3lst_A CALO1 methyltransferase 99.2 6E-11 2E-15 126.7 11.7 113 522-652 175-288 (348)
148 3r0q_C Probable protein argini 99.2 8.7E-11 3E-15 127.6 13.0 113 521-648 53-167 (376)
149 3uwp_A Histone-lysine N-methyl 99.2 5E-11 1.7E-15 132.1 11.0 129 511-649 153-287 (438)
150 1af7_A Chemotaxis receptor met 99.2 4.6E-11 1.6E-15 125.4 10.3 118 531-648 105-250 (274)
151 1fbn_A MJ fibrillarin homologu 99.2 7.4E-11 2.5E-15 118.3 11.3 105 524-649 67-177 (230)
152 1o9g_A RRNA methyltransferase; 99.2 5.5E-11 1.9E-15 120.6 10.4 125 518-653 38-216 (250)
153 2ozv_A Hypothetical protein AT 99.2 7.2E-11 2.5E-15 121.6 11.4 122 523-654 28-174 (260)
154 3r3h_A O-methyltransferase, SA 99.2 2.7E-11 9.2E-16 123.8 7.5 113 521-649 50-169 (242)
155 3reo_A (ISO)eugenol O-methyltr 99.2 1.6E-10 5.4E-15 124.9 13.7 107 523-652 194-302 (368)
156 2pjd_A Ribosomal RNA small sub 99.2 2.1E-11 7E-16 130.5 6.6 117 520-652 185-305 (343)
157 2ipx_A RRNA 2'-O-methyltransfe 99.2 8.3E-11 2.8E-15 117.8 10.5 107 527-651 73-183 (233)
158 3c3p_A Methyltransferase; NP_9 99.2 9.3E-11 3.2E-15 115.5 10.6 107 527-650 52-160 (210)
159 2igt_A SAM dependent methyltra 99.2 2.4E-10 8.3E-15 122.7 14.6 144 522-717 143-304 (332)
160 1g8a_A Fibrillarin-like PRE-rR 99.2 1.2E-10 4E-15 115.9 11.1 103 529-649 71-177 (227)
161 1g6q_1 HnRNP arginine N-methyl 99.1 2E-10 6.9E-15 122.4 13.4 112 522-647 29-142 (328)
162 1ne2_A Hypothetical protein TA 99.1 2.4E-10 8.1E-15 111.5 12.8 96 528-647 48-143 (200)
163 2avd_A Catechol-O-methyltransf 99.1 2.3E-10 7.8E-15 113.5 12.6 113 521-649 59-178 (229)
164 2gpy_A O-methyltransferase; st 99.1 1.1E-10 3.6E-15 116.9 10.2 119 516-651 39-161 (233)
165 3m33_A Uncharacterized protein 99.1 4.6E-11 1.6E-15 119.4 7.4 91 530-648 47-139 (226)
166 1r18_A Protein-L-isoaspartate( 99.1 1.1E-10 3.7E-15 116.6 10.0 109 529-652 82-196 (227)
167 3gdh_A Trimethylguanosine synt 99.1 2.6E-11 8.8E-16 121.5 5.4 102 530-648 77-179 (241)
168 3p9c_A Caffeic acid O-methyltr 99.1 3.1E-10 1E-14 122.6 14.1 106 523-651 192-299 (364)
169 2frn_A Hypothetical protein PH 99.1 4.2E-10 1.4E-14 117.1 14.1 121 509-652 106-227 (278)
170 3q87_B N6 adenine specific DNA 99.1 1.7E-10 5.7E-15 111.1 10.2 96 530-652 22-125 (170)
171 4df3_A Fibrillarin-like rRNA/T 99.1 2.7E-10 9.2E-15 117.3 12.1 107 527-651 73-183 (233)
172 3g89_A Ribosomal RNA small sub 99.1 1.4E-10 4.8E-15 119.3 9.8 100 530-648 79-182 (249)
173 3giw_A Protein of unknown func 99.1 2.4E-10 8.1E-15 120.6 11.7 114 530-655 77-205 (277)
174 4a6d_A Hydroxyindole O-methylt 99.1 8.2E-10 2.8E-14 118.8 16.1 113 523-651 171-284 (353)
175 1ixk_A Methyltransferase; open 99.1 1.7E-10 5.9E-15 122.5 10.6 119 522-652 109-248 (315)
176 2vdv_E TRNA (guanine-N(7)-)-me 99.1 1.3E-10 4.5E-15 117.8 9.3 124 530-658 48-181 (246)
177 1ej0_A FTSJ; methyltransferase 99.1 1.6E-10 5.3E-15 107.6 8.7 103 529-654 20-140 (180)
178 2yvl_A TRMI protein, hypotheti 99.1 4.4E-10 1.5E-14 112.4 12.5 116 517-653 77-193 (248)
179 3bzb_A Uncharacterized protein 99.1 5.8E-10 2E-14 116.0 13.8 122 516-648 64-203 (281)
180 3cbg_A O-methyltransferase; cy 99.1 6.3E-10 2.1E-14 112.2 13.6 113 522-650 63-182 (232)
181 2b25_A Hypothetical protein; s 99.1 3.6E-10 1.2E-14 119.9 12.3 127 515-654 89-223 (336)
182 3b3j_A Histone-arginine methyl 99.1 3.6E-10 1.2E-14 127.2 12.8 113 521-648 148-261 (480)
183 3lec_A NADB-rossmann superfami 99.1 6.7E-10 2.3E-14 114.2 13.6 119 517-653 9-127 (230)
184 1nv8_A HEMK protein; class I a 99.1 8.7E-10 3E-14 115.5 14.6 124 514-654 106-253 (284)
185 1fp1_D Isoliquiritigenin 2'-O- 99.1 2.4E-10 8.3E-15 123.1 10.6 106 522-650 199-306 (372)
186 3gnl_A Uncharacterized protein 99.1 7.5E-10 2.6E-14 114.8 13.5 119 517-653 9-127 (244)
187 3p2e_A 16S rRNA methylase; met 99.1 8E-11 2.7E-15 119.2 5.9 108 530-653 23-143 (225)
188 1wy7_A Hypothetical protein PH 99.1 2.1E-09 7.1E-14 105.0 15.7 100 528-647 46-145 (207)
189 3bwc_A Spermidine synthase; SA 99.1 4.6E-10 1.6E-14 118.6 11.8 114 530-652 94-212 (304)
190 3id6_C Fibrillarin-like rRNA/T 99.1 6.4E-10 2.2E-14 114.3 12.2 120 514-651 56-182 (232)
191 1sui_A Caffeoyl-COA O-methyltr 99.1 3E-10 1E-14 116.4 9.6 113 521-649 69-189 (247)
192 2nxc_A L11 mtase, ribosomal pr 99.1 2.9E-10 9.9E-15 116.7 9.5 99 530-650 119-218 (254)
193 1fp2_A Isoflavone O-methyltran 99.1 4.1E-10 1.4E-14 120.2 10.8 101 529-652 186-290 (352)
194 3kr9_A SAM-dependent methyltra 99.0 1.4E-09 4.8E-14 111.4 13.8 117 518-653 4-121 (225)
195 3hp7_A Hemolysin, putative; st 99.0 3.4E-10 1.2E-14 120.1 9.4 105 520-648 73-183 (291)
196 1u2z_A Histone-lysine N-methyl 99.0 7.3E-10 2.5E-14 123.4 12.3 117 517-649 228-358 (433)
197 3c3y_A Pfomt, O-methyltransfer 99.0 1.4E-09 4.7E-14 110.4 13.1 112 522-649 61-180 (237)
198 3lcv_B Sisomicin-gentamicin re 99.0 4.2E-10 1.4E-14 118.1 8.6 122 514-653 117-238 (281)
199 2h00_A Methyltransferase 10 do 99.0 3.8E-10 1.3E-14 114.2 8.1 106 531-648 65-190 (254)
200 3tm4_A TRNA (guanine N2-)-meth 99.0 8.8E-10 3E-14 119.6 10.9 124 514-652 201-331 (373)
201 3frh_A 16S rRNA methylase; met 99.0 9.5E-10 3.2E-14 114.2 10.5 105 530-653 104-208 (253)
202 3adn_A Spermidine synthase; am 99.0 1.4E-09 4.8E-14 115.0 12.1 113 530-650 82-198 (294)
203 3ajd_A Putative methyltransfer 99.0 6.2E-10 2.1E-14 115.4 9.2 118 523-652 75-213 (274)
204 3a27_A TYW2, uncharacterized p 99.0 8.7E-10 3E-14 114.5 10.0 103 529-651 117-220 (272)
205 2ld4_A Anamorsin; methyltransf 99.0 5.6E-10 1.9E-14 106.7 7.4 90 528-651 9-102 (176)
206 2plw_A Ribosomal RNA methyltra 99.0 3.2E-09 1.1E-13 103.0 12.7 100 530-652 21-156 (201)
207 2bm8_A Cephalosporin hydroxyla 99.0 6.5E-10 2.2E-14 113.2 7.9 99 530-650 80-187 (236)
208 2i7c_A Spermidine synthase; tr 99.0 2.6E-09 8.8E-14 111.8 12.1 115 529-652 76-194 (283)
209 4hc4_A Protein arginine N-meth 99.0 2.1E-09 7.2E-14 117.8 11.8 106 528-648 80-186 (376)
210 1zg3_A Isoflavanone 4'-O-methy 99.0 1E-09 3.4E-14 117.5 9.1 99 530-651 192-294 (358)
211 3c0k_A UPF0064 protein YCCW; P 99.0 9.9E-09 3.4E-13 111.9 16.9 106 530-651 219-340 (396)
212 3opn_A Putative hemolysin; str 98.9 3.9E-09 1.3E-13 107.7 12.2 107 520-650 25-137 (232)
213 2b78_A Hypothetical protein SM 98.9 6.1E-09 2.1E-13 113.7 14.5 108 530-651 211-332 (385)
214 2f8l_A Hypothetical protein LM 98.9 8E-09 2.7E-13 110.3 15.0 119 521-653 119-259 (344)
215 1xj5_A Spermidine synthase 1; 98.9 4.8E-09 1.7E-13 112.9 13.3 113 529-650 118-235 (334)
216 2zfu_A Nucleomethylin, cerebra 98.9 1E-09 3.5E-14 107.8 7.4 93 523-651 58-152 (215)
217 1uir_A Polyamine aminopropyltr 98.9 3.6E-09 1.2E-13 112.4 12.1 112 530-649 76-194 (314)
218 2o07_A Spermidine synthase; st 98.9 3.3E-09 1.1E-13 112.5 11.6 113 529-650 93-209 (304)
219 1iy9_A Spermidine synthase; ro 98.9 4E-09 1.4E-13 110.0 11.9 113 530-651 74-190 (275)
220 3gjy_A Spermidine synthase; AP 98.9 3.9E-09 1.3E-13 113.3 11.6 107 532-651 90-201 (317)
221 2yxl_A PH0851 protein, 450AA l 98.9 4.8E-09 1.6E-13 116.7 12.7 120 522-653 250-392 (450)
222 1zq9_A Probable dimethyladenos 98.9 4.9E-09 1.7E-13 109.8 11.4 85 520-620 17-101 (285)
223 2pt6_A Spermidine synthase; tr 98.9 5.7E-09 1.9E-13 111.5 12.0 113 530-652 115-232 (321)
224 1uwv_A 23S rRNA (uracil-5-)-me 98.9 9.2E-09 3.2E-13 113.8 13.7 90 515-619 270-363 (433)
225 1inl_A Spermidine synthase; be 98.9 7.5E-09 2.6E-13 109.0 12.4 113 530-652 89-207 (296)
226 3sso_A Methyltransferase; macr 98.9 9.9E-10 3.4E-14 121.4 5.6 125 504-653 189-327 (419)
227 2b2c_A Spermidine synthase; be 98.9 5.2E-09 1.8E-13 111.7 10.9 111 530-650 107-222 (314)
228 1mjf_A Spermidine synthase; sp 98.9 5E-09 1.7E-13 109.4 10.5 115 530-650 74-193 (281)
229 2as0_A Hypothetical protein PH 98.9 1.3E-08 4.4E-13 110.8 14.0 108 531-652 217-337 (396)
230 1wxx_A TT1595, hypothetical pr 98.9 1.2E-08 3.9E-13 111.0 13.4 107 531-652 209-327 (382)
231 2frx_A Hypothetical protein YE 98.9 5E-09 1.7E-13 118.0 10.7 118 523-652 107-248 (479)
232 2h1r_A Dimethyladenosine trans 98.9 8.5E-09 2.9E-13 108.8 11.9 86 520-622 31-116 (299)
233 2nyu_A Putative ribosomal RNA 98.8 2.3E-08 8E-13 96.3 11.9 101 530-653 21-148 (196)
234 2wa2_A Non-structural protein 98.8 6.1E-09 2.1E-13 109.3 7.6 116 519-652 70-195 (276)
235 2qm3_A Predicted methyltransfe 98.8 3.9E-08 1.3E-12 106.5 14.1 106 530-652 171-280 (373)
236 3m6w_A RRNA methylase; rRNA me 98.8 7.2E-09 2.5E-13 116.4 8.4 118 522-652 92-231 (464)
237 2oxt_A Nucleoside-2'-O-methylt 98.8 7.6E-09 2.6E-13 107.9 7.6 118 517-652 60-187 (265)
238 3gru_A Dimethyladenosine trans 98.8 1.4E-08 4.6E-13 107.9 9.6 86 520-622 39-124 (295)
239 3k0b_A Predicted N6-adenine-sp 98.8 2.4E-08 8.2E-13 109.7 11.3 137 511-659 181-359 (393)
240 1sqg_A SUN protein, FMU protei 98.8 1.6E-08 5.6E-13 111.5 10.0 117 522-652 237-376 (429)
241 3k6r_A Putative transferase PH 98.8 5E-08 1.7E-12 102.8 13.1 118 508-648 105-223 (278)
242 3ldg_A Putative uncharacterize 98.7 4.5E-08 1.5E-12 107.4 12.9 135 513-659 176-352 (384)
243 4dmg_A Putative uncharacterize 98.7 5.6E-08 1.9E-12 106.9 13.5 106 531-652 214-328 (393)
244 2yx1_A Hypothetical protein MJ 98.7 4E-08 1.4E-12 105.2 11.9 116 510-652 177-293 (336)
245 3dou_A Ribosomal RNA large sub 98.7 5.9E-08 2E-12 95.7 12.0 96 530-651 24-140 (191)
246 2cmg_A Spermidine synthase; tr 98.7 2.4E-08 8.4E-13 103.8 9.5 99 530-649 71-170 (262)
247 2jjq_A Uncharacterized RNA met 98.7 8.8E-08 3E-12 106.2 14.3 107 518-650 280-387 (425)
248 1qam_A ERMC' methyltransferase 98.7 5.8E-08 2E-12 99.3 11.9 77 520-613 19-96 (244)
249 3m4x_A NOL1/NOP2/SUN family pr 98.7 1.4E-08 4.8E-13 113.8 7.7 119 522-652 96-236 (456)
250 3tqs_A Ribosomal RNA small sub 98.7 5.7E-08 2E-12 100.8 11.3 78 520-614 18-99 (255)
251 2ih2_A Modification methylase 98.7 2.3E-08 7.7E-13 108.4 8.2 111 521-653 29-167 (421)
252 3ldu_A Putative methylase; str 98.7 5.8E-08 2E-12 106.3 11.5 135 513-659 177-353 (385)
253 3v97_A Ribosomal RNA large sub 98.7 2.8E-08 9.5E-13 116.7 9.2 106 531-652 539-659 (703)
254 3bt7_A TRNA (uracil-5-)-methyl 98.6 7.2E-08 2.4E-12 104.4 10.8 112 517-652 200-328 (369)
255 2p41_A Type II methyltransfera 98.6 3E-08 1E-12 105.3 7.0 103 530-653 81-194 (305)
256 3fut_A Dimethyladenosine trans 98.6 7.5E-08 2.5E-12 101.0 9.3 93 520-632 36-129 (271)
257 2b9e_A NOL1/NOP2/SUN domain fa 98.6 2.4E-07 8.3E-12 98.7 11.9 118 523-652 94-236 (309)
258 2r6z_A UPF0341 protein in RSP 98.5 3.8E-08 1.3E-12 102.2 4.7 88 522-624 74-173 (258)
259 1yub_A Ermam, rRNA methyltrans 98.5 1.3E-08 4.6E-13 103.5 0.2 81 521-619 19-100 (245)
260 2okc_A Type I restriction enzy 98.5 1E-07 3.5E-12 105.6 6.9 119 521-652 161-309 (445)
261 3ftd_A Dimethyladenosine trans 98.5 4.3E-07 1.5E-11 93.7 10.6 89 520-626 20-108 (249)
262 1m6y_A S-adenosyl-methyltransf 98.4 2E-07 6.9E-12 99.1 6.8 84 522-619 17-105 (301)
263 2dul_A N(2),N(2)-dimethylguano 98.4 2.7E-07 9.3E-12 100.9 7.7 113 531-650 47-164 (378)
264 3uzu_A Ribosomal RNA small sub 98.4 6.7E-07 2.3E-11 94.1 9.1 74 520-609 31-105 (279)
265 2xyq_A Putative 2'-O-methyl tr 98.4 9.5E-07 3.3E-11 93.6 9.9 97 528-652 60-173 (290)
266 3v97_A Ribosomal RNA large sub 98.3 1.1E-06 3.8E-11 103.2 11.1 134 513-657 172-354 (703)
267 1qyr_A KSGA, high level kasuga 98.3 5.3E-07 1.8E-11 93.3 5.9 71 520-609 10-82 (252)
268 2qfm_A Spermine synthase; sper 98.2 2.3E-06 7.7E-11 93.5 8.9 113 531-649 188-313 (364)
269 3ll7_A Putative methyltransfer 98.2 1.2E-06 4.1E-11 97.1 5.6 74 532-618 94-169 (410)
270 2ar0_A M.ecoki, type I restric 98.1 3.8E-06 1.3E-10 95.9 8.8 119 522-652 160-314 (541)
271 3axs_A Probable N(2),N(2)-dime 98.1 4.8E-06 1.6E-10 91.7 9.1 103 530-650 51-158 (392)
272 3o4f_A Spermidine synthase; am 97.9 5.8E-05 2E-09 80.3 12.7 109 529-648 81-195 (294)
273 2oyr_A UPF0341 protein YHIQ; a 97.9 1.5E-05 5.1E-10 83.1 8.1 96 521-624 76-176 (258)
274 3lkd_A Type I restriction-modi 97.9 7.5E-05 2.6E-09 85.4 12.8 119 522-652 208-360 (542)
275 3cvo_A Methyltransferase-like 97.8 0.00027 9.1E-09 71.4 14.0 97 531-649 30-152 (202)
276 3s1s_A Restriction endonucleas 97.7 0.00019 6.7E-09 85.3 13.7 116 531-652 321-467 (878)
277 4gqb_A Protein arginine N-meth 97.7 6.2E-05 2.1E-09 87.6 9.1 103 532-648 358-464 (637)
278 3khk_A Type I restriction-modi 97.6 5.1E-05 1.8E-09 86.8 7.2 119 522-652 236-397 (544)
279 1wg8_A Predicted S-adenosylmet 97.6 7E-05 2.4E-09 79.3 7.4 78 522-618 13-95 (285)
280 3evf_A RNA-directed RNA polyme 97.6 0.00017 5.8E-09 76.0 10.1 122 512-648 55-181 (277)
281 3ua3_A Protein arginine N-meth 97.6 6.1E-05 2.1E-09 88.2 6.7 105 532-648 410-531 (745)
282 2qy6_A UPF0209 protein YFCK; s 97.4 0.00026 8.9E-09 73.6 7.6 118 530-648 59-210 (257)
283 3b5i_A S-adenosyl-L-methionine 97.3 0.00081 2.8E-08 73.7 11.0 122 532-653 53-228 (374)
284 4auk_A Ribosomal RNA large sub 97.3 0.00073 2.5E-08 74.0 10.3 72 529-622 209-280 (375)
285 3gcz_A Polyprotein; flavivirus 97.3 0.00014 4.9E-09 76.7 4.1 115 514-644 73-192 (282)
286 2efj_A 3,7-dimethylxanthine me 97.2 0.0013 4.6E-08 72.2 11.1 109 532-654 53-229 (384)
287 1m6e_X S-adenosyl-L-methionnin 97.2 0.00073 2.5E-08 73.7 8.7 114 532-653 52-212 (359)
288 2k4m_A TR8_protein, UPF0146 pr 97.2 0.00065 2.2E-08 65.7 7.2 97 520-654 26-125 (153)
289 2zig_A TTHA0409, putative modi 97.2 0.00046 1.6E-08 72.4 6.6 57 518-578 223-279 (297)
290 3c6k_A Spermine synthase; sper 97.1 0.00081 2.8E-08 73.9 8.3 114 530-649 204-329 (381)
291 4fzv_A Putative methyltransfer 97.0 0.0018 6.2E-08 70.6 9.4 123 523-652 140-286 (359)
292 2wk1_A NOVP; transferase, O-me 96.7 0.0024 8.2E-08 67.5 7.6 118 517-649 88-242 (282)
293 3p8z_A Mtase, non-structural p 96.7 0.0091 3.1E-07 62.0 11.5 123 510-648 57-184 (267)
294 3tka_A Ribosomal RNA small sub 96.6 0.0015 5.2E-08 70.7 5.1 82 521-618 47-134 (347)
295 3lkz_A Non-structural protein 96.4 0.012 4E-07 62.8 10.2 124 510-650 73-204 (321)
296 3eld_A Methyltransferase; flav 96.4 0.0035 1.2E-07 66.7 6.2 124 511-650 61-190 (300)
297 3ufb_A Type I restriction-modi 96.3 0.012 4.1E-07 67.1 10.2 128 511-652 199-364 (530)
298 1g60_A Adenine-specific methyl 96.1 0.0081 2.8E-07 61.7 6.9 55 519-577 201-255 (260)
299 2px2_A Genome polyprotein [con 95.8 0.023 7.7E-07 59.6 8.5 124 511-652 53-185 (269)
300 1i4w_A Mitochondrial replicati 95.2 0.029 9.9E-07 61.0 7.5 61 531-607 58-118 (353)
301 1rjd_A PPM1P, carboxy methyl t 95.2 0.091 3.1E-06 56.5 11.2 128 518-647 80-229 (334)
302 4dip_A Peptidyl-prolyl CIS-tra 95.1 0.036 1.2E-06 50.8 6.6 107 381-500 10-123 (125)
303 2uyo_A Hypothetical protein ML 94.5 1 3.5E-05 47.8 16.9 110 531-653 102-221 (310)
304 2pbc_A FK506-binding protein 2 94.4 0.026 8.9E-07 49.8 3.6 92 396-500 3-98 (102)
305 2vn1_A 70 kDa peptidylprolyl i 94.3 0.034 1.2E-06 51.3 4.5 98 391-500 25-127 (129)
306 1g55_A DNA cytosine methyltran 93.8 0.091 3.1E-06 56.4 7.2 71 532-619 2-75 (343)
307 2d9f_A FK506-binding protein 8 93.3 0.1 3.5E-06 48.7 5.8 103 388-502 23-125 (135)
308 2ppn_A FK506-binding protein 1 93.3 0.089 3E-06 46.6 5.1 90 395-497 11-105 (107)
309 2awg_A 38 kDa FK-506 binding p 93.1 0.092 3.1E-06 47.6 4.9 97 389-498 20-116 (118)
310 3r24_A NSP16, 2'-O-methyl tran 93.0 0.22 7.4E-06 53.4 8.1 107 515-648 88-215 (344)
311 2y78_A Peptidyl-prolyl CIS-tra 92.6 0.24 8.1E-06 46.3 7.1 90 371-469 16-110 (133)
312 1yat_A FK506 binding protein; 92.5 0.14 4.9E-06 45.9 5.3 90 395-497 17-111 (113)
313 3g7u_A Cytosine-specific methy 92.5 0.54 1.8E-05 51.2 10.9 68 533-619 3-78 (376)
314 2jwx_A FKBP38NTD, FK506-bindin 91.4 0.36 1.2E-05 46.6 7.0 101 386-498 47-147 (157)
315 3o5q_A Peptidyl-prolyl CIS-tra 91.0 0.17 6E-06 46.6 4.3 91 395-498 30-125 (128)
316 3o5e_A Peptidyl-prolyl CIS-tra 90.9 0.21 7.2E-06 47.2 4.7 91 395-498 46-141 (144)
317 2lgo_A FKBP; infectious diseas 90.8 0.24 8.1E-06 46.0 5.0 68 395-469 35-107 (130)
318 2f4e_A ATFKBP42; FKBP-like, al 90.7 0.17 5.6E-06 49.8 4.0 99 395-503 60-163 (180)
319 3kz7_A FK506-binding protein 3 90.7 0.46 1.6E-05 42.8 6.6 89 397-497 18-117 (119)
320 3b7x_A FK506-binding protein 6 89.4 0.14 4.9E-06 47.7 2.1 92 395-498 37-132 (134)
321 2py6_A Methyltransferase FKBM; 89.2 0.57 1.9E-05 51.4 7.1 49 530-578 225-274 (409)
322 3uf8_A Ubiquitin-like protein 89.2 0.44 1.5E-05 47.9 5.7 91 394-497 114-208 (209)
323 2vz8_A Fatty acid synthase; tr 89.1 0.13 4.5E-06 68.4 2.3 103 531-650 1240-1348(2512)
324 2c7p_A Modification methylase 89.1 0.8 2.7E-05 48.9 8.0 67 532-619 11-78 (327)
325 1r9h_A FKB-6, FK506 binding pr 89.0 0.31 1E-05 45.5 4.2 93 395-500 25-122 (135)
326 1boo_A Protein (N-4 cytosine-s 88.7 0.41 1.4E-05 50.8 5.4 52 522-577 244-295 (323)
327 1lss_A TRK system potassium up 87.7 6.8 0.00023 34.6 12.1 101 532-658 4-110 (140)
328 3qv2_A 5-cytosine DNA methyltr 87.6 1.1 3.6E-05 48.1 7.7 70 532-619 10-83 (327)
329 1eg2_A Modification methylase 86.9 0.61 2.1E-05 49.6 5.4 57 517-577 229-288 (319)
330 3fwz_A Inner membrane protein 84.3 5 0.00017 36.6 9.6 102 532-660 7-115 (140)
331 2lkn_A AH receptor-interacting 83.9 0.97 3.3E-05 44.1 4.7 71 395-468 21-95 (165)
332 3ius_A Uncharacterized conserv 83.3 11 0.00037 37.6 12.4 93 533-651 6-104 (286)
333 4h0n_A DNMT2; SAH binding, tra 81.8 0.85 2.9E-05 48.9 3.7 69 533-618 4-75 (333)
334 1x47_A DGCR8 protein; structur 81.7 1.3 4.6E-05 39.4 4.4 77 207-322 12-88 (98)
335 2qrv_A DNA (cytosine-5)-methyl 81.5 1.9 6.4E-05 45.5 6.2 72 530-619 14-90 (295)
336 3ubt_Y Modification methylase 81.3 2.6 8.7E-05 44.0 7.1 66 533-618 1-67 (331)
337 1q1c_A FK506-binding protein 4 81.1 2 6.9E-05 44.9 6.2 93 395-500 62-159 (280)
338 3vyw_A MNMC2; tRNA wobble urid 80.9 6.2 0.00021 42.1 9.9 137 505-649 62-224 (308)
339 1zkd_A DUF185; NESG, RPR58, st 80.3 4.8 0.00016 44.2 9.1 78 531-626 80-163 (387)
340 1hxv_A Trigger factor; FKBP fo 80.1 1.3 4.3E-05 40.3 3.7 58 398-461 29-88 (113)
341 3two_A Mannitol dehydrogenase; 79.7 3.2 0.00011 43.6 7.3 47 526-574 171-218 (348)
342 2if4_A ATFKBP42; FKBP-like, al 79.6 0.84 2.9E-05 47.8 2.7 97 395-501 60-161 (338)
343 3pr9_A FKBP-type peptidyl-prol 79.5 1.1 3.7E-05 43.4 3.2 62 400-469 3-81 (157)
344 3llv_A Exopolyphosphatase-rela 79.3 12 0.00043 33.5 10.2 102 532-660 6-113 (141)
345 3adg_A F21M12.9 protein; HYL1, 79.2 2 7E-05 35.8 4.5 69 212-317 4-72 (73)
346 1kt0_A FKBP51, 51 kDa FK506-bi 78.7 1.1 3.8E-05 48.9 3.5 68 395-469 42-114 (457)
347 3jxv_A 70 kDa peptidyl-prolyl 78.5 2 6.7E-05 46.2 5.2 95 397-499 141-235 (356)
348 4dt4_A FKBP-type 16 kDa peptid 78.5 1.2 3.9E-05 43.7 3.1 64 399-469 25-92 (169)
349 1u79_A FKBP-type peptidyl-prol 76.6 1.3 4.5E-05 40.7 2.8 69 395-470 23-101 (129)
350 1ekz_A DSRBDIII, maternal effe 76.5 2.9 9.9E-05 35.1 4.7 68 211-317 7-74 (76)
351 2oo3_A Protein involved in cat 75.8 1.2 4.2E-05 47.0 2.6 73 531-620 91-167 (283)
352 3me5_A Cytosine-specific methy 75.3 2.7 9.2E-05 47.4 5.4 60 532-607 88-147 (482)
353 4f3n_A Uncharacterized ACR, CO 73.9 4 0.00014 45.5 6.2 89 522-626 128-221 (432)
354 3c85_A Putative glutathione-re 73.8 15 0.00051 34.6 9.5 93 532-652 39-141 (183)
355 3prb_A FKBP-type peptidyl-prol 73.5 1.8 6.3E-05 44.3 3.2 62 400-469 3-81 (231)
356 2k8i_A SLYD, peptidyl-prolyl C 73.4 1.6 5.4E-05 42.7 2.5 63 399-468 3-68 (171)
357 1q1c_A FK506-binding protein 4 73.4 3.2 0.00011 43.3 5.1 92 395-500 179-274 (280)
358 3cgm_A SLYD, peptidyl-prolyl C 73.2 2 6.9E-05 41.4 3.2 60 400-468 4-63 (158)
359 2kr7_A FKBP-type peptidyl-prol 72.9 2.2 7.4E-05 40.7 3.3 64 399-468 7-73 (151)
360 2kfw_A FKBP-type peptidyl-prol 72.8 2.4 8.2E-05 42.4 3.7 63 399-468 3-68 (196)
361 3iei_A Leucine carboxyl methyl 71.4 46 0.0016 35.6 13.6 120 531-651 90-230 (334)
362 3jxv_A 70 kDa peptidyl-prolyl 71.0 4 0.00014 43.7 5.3 93 395-498 255-353 (356)
363 1ix5_A FKBP; ppiase, isomerase 69.5 1.4 4.8E-05 42.0 1.2 63 399-468 2-81 (151)
364 3l4b_C TRKA K+ channel protien 68.5 25 0.00087 34.1 10.1 101 534-660 2-109 (218)
365 3oe2_A Peptidyl-prolyl CIS-tra 67.7 4.6 0.00016 41.0 4.6 89 395-498 128-217 (219)
366 1di2_A XLRBPA, double stranded 66.3 4.8 0.00016 33.1 3.7 68 212-317 1-68 (69)
367 3l9w_A Glutathione-regulated p 66.2 17 0.00059 39.8 9.1 102 532-660 4-112 (413)
368 3goh_A Alcohol dehydrogenase, 64.1 6.9 0.00024 40.4 5.2 47 525-574 136-183 (315)
369 1id1_A Putative potassium chan 64.0 52 0.0018 30.0 10.7 105 532-660 3-115 (153)
370 3adj_A F21M12.9 protein; HYL1, 63.9 5.1 0.00018 33.7 3.4 68 213-317 6-73 (76)
371 3ps9_A TRNA 5-methylaminomethy 63.6 7.1 0.00024 45.0 5.7 138 514-651 42-219 (676)
372 2dph_A Formaldehyde dismutase; 62.8 7.4 0.00025 41.8 5.3 49 525-574 179-228 (398)
373 3pvc_A TRNA 5-methylaminomethy 62.8 10 0.00035 43.8 6.9 122 531-652 58-212 (689)
374 2l2n_A Hyponastic leave 1; DSR 62.4 7.7 0.00026 34.8 4.5 70 211-317 17-86 (103)
375 1lnq_A MTHK channels, potassiu 62.3 39 0.0013 35.1 10.7 101 532-660 115-221 (336)
376 3adl_A RISC-loading complex su 62.1 7.8 0.00027 33.8 4.4 75 205-317 9-83 (88)
377 1q6h_A FKBP-type peptidyl-prol 61.7 8.3 0.00028 39.2 5.2 66 395-469 132-201 (224)
378 1uil_A Double-stranded RNA-bin 61.1 5.6 0.00019 36.3 3.4 87 198-318 13-99 (113)
379 2aef_A Calcium-gated potassium 60.8 53 0.0018 32.1 10.8 101 532-660 9-115 (234)
380 1f8f_A Benzyl alcohol dehydrog 60.5 9.2 0.00031 40.5 5.5 51 523-574 182-233 (371)
381 1whn_A Hypothetical protein ri 60.4 11 0.00036 35.3 5.2 81 197-317 12-93 (128)
382 3ggo_A Prephenate dehydrogenas 60.4 43 0.0015 35.0 10.6 93 532-650 33-127 (314)
383 2g1u_A Hypothetical protein TM 59.8 24 0.00081 32.4 7.6 100 530-655 17-123 (155)
384 1fd9_A Protein (macrophage inf 59.0 6.3 0.00022 39.7 3.7 90 395-499 117-210 (213)
385 1uhz_A Staufen (RNA binding pr 58.1 7.4 0.00025 33.9 3.5 70 210-317 5-74 (89)
386 2dix_A Interferon-inducible do 57.8 12 0.0004 32.2 4.7 69 210-317 7-75 (84)
387 3qiv_A Short-chain dehydrogena 56.7 24 0.00082 34.7 7.5 76 531-622 8-96 (253)
388 3ado_A Lambda-crystallin; L-gu 55.9 1.2E+02 0.0041 32.2 13.1 160 531-711 5-183 (319)
389 4e12_A Diketoreductase; oxidor 55.5 18 0.00063 36.9 6.6 105 533-649 5-119 (283)
390 3s2e_A Zinc-containing alcohol 55.1 17 0.00057 37.9 6.3 48 525-574 160-208 (340)
391 1pl8_A Human sorbitol dehydrog 55.1 17 0.0006 38.2 6.5 49 525-574 165-214 (356)
392 3fpc_A NADP-dependent alcohol 54.7 51 0.0018 34.4 10.0 49 525-574 160-209 (352)
393 1jvw_A Macrophage infectivity 54.2 5.9 0.0002 38.4 2.4 91 395-500 48-143 (167)
394 3tos_A CALS11; methyltransfera 53.8 76 0.0026 32.8 10.9 107 531-648 69-214 (257)
395 3oig_A Enoyl-[acyl-carrier-pro 52.8 78 0.0027 31.2 10.6 77 531-622 6-97 (266)
396 2ew2_A 2-dehydropantoate 2-red 52.2 1E+02 0.0035 30.9 11.5 101 533-652 4-109 (316)
397 2cpn_A TAR RNA-binding protein 52.1 10 0.00035 33.1 3.4 69 211-317 16-84 (89)
398 1p5q_A FKBP52, FK506-binding p 51.6 21 0.00071 37.0 6.3 63 395-466 36-102 (336)
399 3swr_A DNA (cytosine-5)-methyl 50.1 18 0.00061 44.4 6.3 44 531-575 539-582 (1002)
400 1kol_A Formaldehyde dehydrogen 49.5 23 0.00078 37.8 6.4 48 526-574 180-228 (398)
401 4dvj_A Putative zinc-dependent 49.4 50 0.0017 34.9 9.0 42 531-574 171-215 (363)
402 1yqd_A Sinapyl alcohol dehydro 48.4 34 0.0012 36.1 7.5 46 527-574 182-229 (366)
403 1zcj_A Peroxisomal bifunctiona 47.7 1.1E+02 0.0037 33.8 11.7 107 532-649 37-148 (463)
404 2f1k_A Prephenate dehydrogenas 47.6 89 0.0031 31.2 10.2 89 534-652 2-92 (279)
405 3uog_A Alcohol dehydrogenase; 47.4 29 0.00099 36.6 6.7 53 520-574 178-231 (363)
406 1e3j_A NADP(H)-dependent ketos 46.8 28 0.00097 36.4 6.5 48 525-574 162-210 (352)
407 4g65_A TRK system potassium up 46.8 33 0.0011 38.1 7.3 96 532-653 3-105 (461)
408 2ae2_A Protein (tropinone redu 44.5 62 0.0021 32.0 8.3 76 531-622 8-97 (260)
409 3lyl_A 3-oxoacyl-(acyl-carrier 43.8 44 0.0015 32.7 7.0 76 531-622 4-92 (247)
410 3d4o_A Dipicolinate synthase s 43.7 1E+02 0.0035 31.6 10.0 90 529-650 152-243 (293)
411 4g81_D Putative hexonate dehyd 43.3 44 0.0015 34.2 7.1 76 530-621 7-95 (255)
412 1uuf_A YAHK, zinc-type alcohol 43.1 25 0.00086 37.3 5.5 46 527-574 190-236 (369)
413 2cf5_A Atccad5, CAD, cinnamyl 42.8 30 0.001 36.4 6.0 46 527-574 175-222 (357)
414 1v3u_A Leukotriene B4 12- hydr 42.8 28 0.00095 36.0 5.6 47 525-573 139-187 (333)
415 1cdo_A Alcohol dehydrogenase; 42.7 23 0.00079 37.4 5.1 51 523-574 184-235 (374)
416 2dpo_A L-gulonate 3-dehydrogen 42.1 74 0.0025 33.5 8.9 162 532-713 6-185 (319)
417 2jhf_A Alcohol dehydrogenase E 41.5 25 0.00085 37.2 5.1 51 523-574 183-234 (374)
418 3c24_A Putative oxidoreductase 41.3 1.1E+02 0.0037 30.9 9.7 87 533-651 12-101 (286)
419 3e8x_A Putative NAD-dependent 40.8 63 0.0022 31.2 7.5 71 531-623 20-95 (236)
420 1p0f_A NADP-dependent alcohol 40.8 21 0.00072 37.7 4.4 51 523-574 183-234 (373)
421 2g5c_A Prephenate dehydrogenas 40.7 1.5E+02 0.0052 29.6 10.6 90 533-649 2-94 (281)
422 3zwc_A Peroxisomal bifunctiona 40.7 3.6E+02 0.012 31.9 15.2 162 532-713 316-491 (742)
423 3o38_A Short chain dehydrogena 40.6 78 0.0027 31.3 8.4 77 531-622 21-111 (266)
424 3o26_A Salutaridine reductase; 40.5 67 0.0023 32.0 7.9 77 531-622 11-101 (311)
425 2rir_A Dipicolinate synthase, 40.3 63 0.0022 33.2 7.8 89 529-650 154-245 (300)
426 1e3i_A Alcohol dehydrogenase, 40.1 26 0.0009 37.0 5.0 51 523-574 187-238 (376)
427 1pqw_A Polyketide synthase; ro 39.5 19 0.00064 34.2 3.4 47 525-573 32-80 (198)
428 3m6i_A L-arabinitol 4-dehydrog 39.3 34 0.0012 35.9 5.7 50 525-575 173-223 (363)
429 3f9i_A 3-oxoacyl-[acyl-carrier 39.1 69 0.0024 31.2 7.6 75 529-622 11-94 (249)
430 2vhw_A Alanine dehydrogenase; 38.6 34 0.0012 36.8 5.6 44 530-575 166-210 (377)
431 1ae1_A Tropinone reductase-I; 38.4 49 0.0017 33.1 6.5 76 531-622 20-109 (273)
432 3p2y_A Alanine dehydrogenase/p 38.3 12 0.00041 41.0 2.0 42 531-574 183-225 (381)
433 1y1p_A ARII, aldehyde reductas 38.2 1.7E+02 0.0057 29.4 10.5 80 531-625 10-96 (342)
434 2fzw_A Alcohol dehydrogenase c 38.2 24 0.00084 37.1 4.4 51 523-574 182-233 (373)
435 2cfc_A 2-(R)-hydroxypropyl-COM 37.9 1.1E+02 0.0036 29.7 8.7 75 532-621 2-89 (250)
436 1x49_A Interferon-induced, dou 37.8 26 0.0009 30.9 3.8 68 212-317 15-82 (97)
437 4da9_A Short-chain dehydrogena 37.4 67 0.0023 32.4 7.4 79 528-622 25-117 (280)
438 4fn4_A Short chain dehydrogena 37.3 67 0.0023 32.8 7.3 75 530-620 5-92 (254)
439 3mog_A Probable 3-hydroxybutyr 37.1 1.1E+02 0.0038 34.1 9.7 100 533-649 6-118 (483)
440 3d1l_A Putative NADP oxidoredu 36.8 1E+02 0.0035 30.6 8.5 90 533-652 11-103 (266)
441 3imf_A Short chain dehydrogena 36.7 78 0.0027 31.3 7.6 75 531-621 5-92 (257)
442 1bg6_A N-(1-D-carboxylethyl)-L 36.3 88 0.003 32.2 8.2 102 533-652 5-110 (359)
443 1pjc_A Protein (L-alanine dehy 36.2 53 0.0018 34.9 6.6 43 531-575 166-209 (361)
444 4dio_A NAD(P) transhydrogenase 35.9 18 0.0006 40.0 2.9 42 531-574 189-231 (405)
445 2dmy_A Spermatid perinuclear R 35.6 28 0.00097 30.6 3.7 72 206-317 11-82 (97)
446 3uko_A Alcohol dehydrogenase c 35.3 20 0.0007 37.9 3.2 51 523-574 185-236 (378)
447 4ej6_A Putative zinc-binding d 35.3 50 0.0017 35.0 6.3 49 525-574 176-225 (370)
448 4b7c_A Probable oxidoreductase 35.2 32 0.0011 35.6 4.6 51 522-574 140-192 (336)
449 3tjr_A Short chain dehydrogena 35.0 75 0.0026 32.5 7.3 78 529-622 28-118 (301)
450 2b7v_A Double-stranded RNA-spe 34.7 55 0.0019 26.8 5.1 39 272-318 30-68 (71)
451 1fmc_A 7 alpha-hydroxysteroid 34.4 41 0.0014 32.7 5.0 76 531-622 10-98 (255)
452 3jv7_A ADH-A; dehydrogenase, n 34.3 49 0.0017 34.4 5.9 46 528-574 168-214 (345)
453 3v8b_A Putative dehydrogenase, 34.3 1.2E+02 0.0041 30.7 8.7 76 531-622 27-115 (283)
454 3gt0_A Pyrroline-5-carboxylate 34.3 32 0.0011 34.2 4.2 93 533-652 3-98 (247)
455 3sju_A Keto reductase; short-c 33.8 95 0.0032 31.2 7.8 76 531-622 23-111 (279)
456 3gms_A Putative NADPH:quinone 33.8 22 0.00077 37.0 3.2 50 523-574 136-187 (340)
457 3h7a_A Short chain dehydrogena 33.8 56 0.0019 32.5 6.0 76 531-622 6-93 (252)
458 2j3h_A NADP-dependent oxidored 33.5 36 0.0012 35.3 4.7 50 523-574 147-198 (345)
459 3ucx_A Short chain dehydrogena 33.4 96 0.0033 30.8 7.7 75 530-620 9-96 (264)
460 2eih_A Alcohol dehydrogenase; 33.3 41 0.0014 35.0 5.1 45 528-574 163-209 (343)
461 2wsb_A Galactitol dehydrogenas 32.9 92 0.0031 30.2 7.3 73 531-622 10-95 (254)
462 3tri_A Pyrroline-5-carboxylate 32.5 79 0.0027 32.3 7.0 93 533-652 4-99 (280)
463 2hcy_A Alcohol dehydrogenase 1 32.3 43 0.0015 34.9 5.1 46 527-574 165-212 (347)
464 1whq_A RNA helicase A; double- 32.2 35 0.0012 30.2 3.7 69 212-318 7-75 (99)
465 2h6e_A ADH-4, D-arabinose 1-de 32.2 45 0.0015 34.7 5.2 44 528-574 168-214 (344)
466 3rkr_A Short chain oxidoreduct 31.6 74 0.0025 31.6 6.5 77 530-622 27-116 (262)
467 1piw_A Hypothetical zinc-type 31.5 50 0.0017 34.7 5.4 46 527-574 175-221 (360)
468 3t4x_A Oxidoreductase, short c 31.2 91 0.0031 31.0 7.1 78 531-622 9-95 (267)
469 4e21_A 6-phosphogluconate dehy 31.1 76 0.0026 34.0 6.8 95 532-654 22-118 (358)
470 3rd5_A Mypaa.01249.C; ssgcid, 31.0 1.2E+02 0.0042 30.4 8.1 74 530-622 14-96 (291)
471 3pk0_A Short-chain dehydrogena 30.8 1.2E+02 0.004 30.2 7.8 77 530-621 8-97 (262)
472 4dcm_A Ribosomal RNA large sub 30.7 2.9E+02 0.0098 29.5 11.4 110 522-653 28-139 (375)
473 2eez_A Alanine dehydrogenase; 30.7 61 0.0021 34.6 6.0 42 530-574 164-207 (369)
474 2hmt_A YUAA protein; RCK, KTN, 30.4 92 0.0031 27.1 6.2 102 532-659 6-113 (144)
475 3llh_A RISC-loading complex su 29.8 46 0.0016 28.8 4.0 72 207-317 10-81 (90)
476 1yb5_A Quinone oxidoreductase; 29.5 61 0.0021 34.0 5.7 48 525-574 164-213 (351)
477 1rjw_A ADH-HT, alcohol dehydro 29.5 1E+02 0.0036 31.9 7.4 45 528-574 161-206 (339)
478 1jvb_A NAD(H)-dependent alcoho 29.4 60 0.0021 33.8 5.6 46 527-574 166-214 (347)
479 3k96_A Glycerol-3-phosphate de 29.4 2.3E+02 0.008 30.0 10.3 104 532-652 29-134 (356)
480 2khx_A Ribonuclease 3; drosha, 29.1 60 0.0021 27.8 4.6 67 213-316 3-74 (85)
481 1xhl_A Short-chain dehydrogena 29.1 91 0.0031 31.8 6.8 78 531-621 25-115 (297)
482 3nzo_A UDP-N-acetylglucosamine 29.1 2.4E+02 0.0081 30.0 10.3 83 532-625 35-125 (399)
483 3rku_A Oxidoreductase YMR226C; 29.0 1.3E+02 0.0044 30.6 7.9 81 531-622 32-125 (287)
484 3nx4_A Putative oxidoreductase 28.9 27 0.00091 35.9 2.7 39 534-574 149-189 (324)
485 3svt_A Short-chain type dehydr 28.9 1.4E+02 0.0046 29.9 8.0 79 531-622 10-101 (281)
486 1xq1_A Putative tropinone redu 28.7 64 0.0022 31.7 5.4 76 531-622 13-102 (266)
487 3ce6_A Adenosylhomocysteinase; 28.7 83 0.0028 35.5 6.8 44 529-574 271-315 (494)
488 3ioy_A Short-chain dehydrogena 28.6 1.5E+02 0.0051 30.6 8.4 78 531-622 7-97 (319)
489 3ic5_A Putative saccharopine d 28.6 63 0.0022 27.2 4.7 68 532-620 5-77 (118)
490 3lf2_A Short chain oxidoreduct 28.3 1.6E+02 0.0054 29.2 8.3 78 531-622 7-97 (265)
491 3abi_A Putative uncharacterize 28.2 22 0.00077 37.7 2.0 40 531-573 15-55 (365)
492 2zwa_A Leucine carboxyl methyl 28.0 3E+02 0.01 31.8 11.6 116 531-648 107-252 (695)
493 3ppi_A 3-hydroxyacyl-COA dehyd 27.9 1.2E+02 0.0042 30.1 7.4 71 530-619 28-110 (281)
494 1e7w_A Pteridine reductase; di 27.7 92 0.0031 31.6 6.5 62 531-607 8-73 (291)
495 3h2s_A Putative NADH-flavin re 27.7 2.6E+02 0.0087 26.2 9.3 95 534-650 2-105 (224)
496 3uve_A Carveol dehydrogenase ( 27.6 1.5E+02 0.0053 29.5 8.1 76 530-621 9-113 (286)
497 4e6p_A Probable sorbitol dehyd 27.4 1.6E+02 0.0055 29.0 8.1 74 530-622 6-92 (259)
498 1h2b_A Alcohol dehydrogenase; 27.3 77 0.0026 33.2 6.0 46 527-574 182-229 (359)
499 1ldn_A L-lactate dehydrogenase 27.2 3.8E+02 0.013 27.8 11.2 39 531-570 5-45 (316)
500 3awd_A GOX2181, putative polyo 27.1 1.3E+02 0.0045 29.2 7.3 76 531-622 12-100 (260)
No 1
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=100.00 E-value=1.5e-197 Score=1705.06 Aligned_cols=721 Identities=50% Similarity=0.807 Sum_probs=571.3
Q ss_pred CccccccCCcEEeecCceeeeecCCCChhHHhhhhhhhcCCCCcEEEEEEEeccccccceeeEEEEecCCcchHHHHHHh
Q 004178 1 MRAATRLSEFVVTSEGQLSIWRKDPYPPEIKESSIIQQSESPDSICIEAIHIPSSLEMAVHPVTLNVSSTGYYLDVIARN 80 (770)
Q Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~a~~ 80 (770)
||||++|||++ ||++| |||||+|||||||++++++||+++|+|+||||||||++|++|++||||||+++||||+||++
T Consensus 183 ~~a~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~a~~ 260 (950)
T 3htx_A 183 MKAAAKLADYI-VASPH-GLRRKNAYPSEIVEALATHVSDSLHSREVAAVYIPCIDEEVVELDTLYISSNRHYLDSIAER 260 (950)
T ss_dssp HHHHHHCCSSE-EEETT-EEEESSCCCHHHHHHHHHTCCCC---EEEEEEEECSSTTSCCEEEEEEECTTSCHHHHHHHH
T ss_pred HHHhhcCCCcE-EeCCc-ccccCCCCCHHHHHHHHHHhcCCCcceEEEEEEeecccccceeeeEEEecCCcchHHHHHHH
Confidence 79999999965 88888 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCeEEEEeeccCCCc--ceEEeeecCccccccccCC---CCCcccccccccCccCccccccccccccceeeeecc
Q 004178 81 LDQTDGNKILVSRTIGKASS--EMRLYFAAPKSYLLDLSSD---LPNVEEVVDFEGSLNPRASYLYGQDIYGDAILASIG 155 (770)
Q Consensus 81 l~~~d~~~~~~sr~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~n~ra~~~~~~~~~~~~~~~~~~ 155 (770)
||++|+|||||||||||||| ||||||+||| ++++++|+ ++|++| +|+||++|+||||||||+||||||||+||
T Consensus 261 l~~~d~~~~~~sr~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~n~ra~~~~~~~i~~~~~~a~~~ 338 (950)
T 3htx_A 261 LGLKDGNQVMISRMFGKASCGSECRLYSEIPK-KYLDNSSDASGTSNEDS-SHIVKSRNARASYICGQDIHGDAILASVG 338 (950)
T ss_dssp HTCSCSSSEEECCCBCHHHHSSCBEEEEECCH-HHHCCC-------------CCCCCBCHHHHHHHTSCCBSCEEEEEEE
T ss_pred hCCCccceEEEEeeccCCCCCcceeEEEecch-hhhhhhhcccccccccc-ccccccccccceeeecccccchhhhhhcC
Confidence 99999999999999999999 9999999999 56666666 999999 99999999999999999999999999999
Q ss_pred ceeecCCccccccchhhhhhhhhccCCCcccccchhhhhhhcCCcceeeccccCCCChhhHHHhhhhhcccCcceeeccc
Q 004178 156 YTRKSEGLFHEDITLQSYYRMLIHLTPSGVYKLSREAILTAELPMAFTTRTNWRGSFPREMLFMFCRQHWLSEPVFSTCS 235 (770)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~k~sr~~~~~a~lp~~~~~~~~w~g~~p~~~l~~fc~~~~l~~~~~~~~~ 235 (770)
|||||++||||||||+|||||||||+|||+|||||+||||||||++||||+||||+|||||||+|||||||+||+|++++
T Consensus 339 ~~~~~~~~~~~~~~~~~~~r~~~~~~p~g~~k~sr~~~~~a~lp~~~t~~~~w~g~~pr~~l~~fc~~~~l~~~~~~~~~ 418 (950)
T 3htx_A 339 YRWKSDDLDYDDVTVNSFYRICCGMSPNGIYKISRQAVIAAQLPFAFTTKSNWRGPLPREILGLFCHQHRLAEPILSSST 418 (950)
T ss_dssp ECSSCSSEEEECCCHHHHHHHHHTTSHHHHHHHHHTCTTTBCCCSCCCCTTTCCSSCHHHHHHHHHHTTTCCCCEEECCC
T ss_pred ccccccccccccchhhhhHHHHhccCCCcceecchhhhhhhcCCcceecccccCCCChHHHHHHHHHHhhcCcceeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccccchhhhhhhhhcccccccccccCCCcccCCCc------eeeEEEEeeccCCcccccCchhhhhhhhhhHhhhh
Q 004178 236 NSLKESSESSRFYEKSAALESAETGKECTSGGGTAASDN------VRCEVKIFSKSRDPILECSPKEFYKKQNESIENAS 309 (770)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (770)
+|+|++|+++||++++ +++++++++ ||+|+++++| |||||||+||+|||||||||+++|+||||||||||
T Consensus 419 ~~~k~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~f~c~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 494 (950)
T 3htx_A 419 APVKSLSDIFRSHKKL---KVSGVDDAN-ENLSRQKEDTPGLGHGFRCEVKIFTKSQDLVLECSPRKFYEKENDAIQNAS 494 (950)
T ss_dssp ------------------------------------------------CEEEEEETTEEEEEECCSCCCSSHHHHHHHHH
T ss_pred Cccccccccccccccc---cccccchhh-hcCCcccCCCCCcccceEEEEEEEecccchhhccChhhhhhhccHHHHHHH
Confidence 9999999999999999 778888888 9999999988 99999999999999999999999999999999999
Q ss_pred hHHHHHHHhhhCCCCCCccccccccCCCCeeeccchhhhhcccccchhccccccccccccccccccccccCCCCceeeee
Q 004178 310 LKVLSWLNAYFKDPDIPLEKLNNLVGALDIQCYPQNFFKKFSSYRFIHNVQQRKMGEKLLQANSINTLNAIPEHGIYCLS 389 (770)
Q Consensus 310 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (770)
||||+|||+|||+||||+||||+++|++||+|+|+||+|||+|||| |++|++++|+++|+++++++
T Consensus 495 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~ 560 (950)
T 3htx_A 495 LKALLWFSKFFADLDVDGEQSCDTDDDQDTKSSSPNVFAAPPILQK--------------EHSSESKNTNVLSAEKRVQS 560 (950)
T ss_dssp HHHHHHHHTSSCCC------------------------------------------------CCCEECC----------C
T ss_pred HHHHHHHHHHHhccCCchhhcccccccccccccchhhhhhhhcccc--------------ccccccccccccccceeeec
Confidence 9999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred cCCCCCCccCCCCceeEEEEEEEEEeccccccc---------------------------ceecccceeeeccCCccccc
Q 004178 390 IGGPDSGIYPSNGCLSFISYSVSLVIEGETMKE---------------------------LLESREEFEFEMGTGAVIPQ 442 (770)
Q Consensus 390 ~~~~~~~~~~~~g~~~~i~y~~~l~~~~~~~~~---------------------------l~e~~~ef~fe~g~~~~~~~ 442 (770)
| |||||+||||+|||+++|++.+| +||+|+||+||||.|+|+++
T Consensus 561 i---------~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~~e~~fe~g~g~~~~~ 631 (950)
T 3htx_A 561 I---------TNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESNEEIEFEVGTGSMNPH 631 (950)
T ss_dssp C---------CTTEEEEEEEEEEEEECC----------------------------CCCEEEEEEEEEEEEETTTCBCHH
T ss_pred c---------CCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccccHHHHHHHhcCCccch
Confidence 9 99999999999999999999999 99999999999999999999
Q ss_pred ceeeeeeccccccceecccCC--chhhhhhccCCccchhhcccccccccceeeeecccCCChhhhhhhhcCCchHHHHHH
Q 004178 443 VEVVTAQMSVGQSACFCKELP--PQELILAAADDSARTFSLLSSRACCLEYHITLLRVTEPPEDRMEQALFSPPLSKQRV 520 (770)
Q Consensus 443 ~~~~~~~~sv~q~~~~~~~l~--p~elflaa~~~~~~diS~Ls~~~~~Ley~i~lL~v~ep~eeR~e~~~F~PPL~~qR~ 520 (770)
++++|+||++||+++|.+.+| |+++++++..++....+.++.+.+| ++....+.+.....+++....|.||++.+|+
T Consensus 632 le~vV~qms~gqT~~F~~~~Pd~p~eLLLaAa~ep~R~~slLsre~~f-Eyals~lay~dea~p~me~gtFsPPL~eqRl 710 (950)
T 3htx_A 632 IESEVTQMTVGEYASFKMTPPDAAEALILAVGSDTVRIRSLLSERPCL-NYNILLLGVKGPSEERMEAAFFKPPLSKQRV 710 (950)
T ss_dssp HHHHHTTCCTTCEEEEEESSCCSCHHHHHHHCSCHHHHHHHTTSCEEE-EEEEEEEEEECSCCCCCCCCCSSSCHHHHHH
T ss_pred hhheeeeccccceeEEeccCcchHHHHHHHHhhcchhhhhhcchhhhh-hHHhhhhccccchhhHHhhCcCCchHHHHHH
Confidence 999999999999999999999 9999999999999999999999998 9999888888888888888899999999999
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
+++.+.+...++.+|||||||+|.++..|++.+++..+|+|+|+|+.|++.|++++....... +.+..+++|++
T Consensus 711 e~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAk------r~gl~nVefiq 784 (950)
T 3htx_A 711 EYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKE------ACNVKSATLYD 784 (950)
T ss_dssp HHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTT------CSSCSEEEEEE
T ss_pred HHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchh------hcCCCceEEEE
Confidence 999999988889999999999999999999987556799999999999999998776432110 22456899999
Q ss_pred CCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEecCCchhHHHhhhccccCCCCCchhhhhccc
Q 004178 601 GSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQSC 680 (770)
Q Consensus 601 GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTPN~efN~lf~~~~~~g~~e~pde~~~~~~~ 680 (770)
+|+.++++.++.||+|+|.++++|++++....++++++++||||.+++++||.++|..+..+.+.....+|+. ....
T Consensus 785 GDa~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG~LIISTPN~eyN~lF~~Lnp~tr~~dPd~---~~~~ 861 (950)
T 3htx_A 785 GSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPKLLIVSTPNYEFNTILQRSTPETQEENNSE---PQLP 861 (950)
T ss_dssp SCTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCSEEEEEECBGGGHHHHTCC---------------CCS
T ss_pred CchHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCCEEEEEecCchhhhhhhhcccccccccccc---cccc
Confidence 9999999988999999999999999977777788899999999999999999999999876532222223332 1245
Q ss_pred cccCCCcccccCHHHHHHHHHHHHHHCCcEEEEEeeeCCCCCCCCccceeeeeecCCCCCCcccccCCCCccceEEEEEe
Q 004178 681 KFRNHDHKFEWTRDQFNCWATELAARHNYSVEFSGVGGSGDREPGFASQIAVFRSRTPPEEDDLLKDGDSAHHYKVIWEW 760 (770)
Q Consensus 681 ~fRh~DHkfewTreEF~~Wa~~La~r~GY~VEF~GvG~~p~~e~Gf~TQiAVF~R~~~~~~~~~~~~~~~~~~y~~v~~w 760 (770)
.+|+++|+|+|++++|+.|+.+++.++||.|+|.|+|+.+.++.|++||||||+| ..+..+.+.+... .|||++|||
T Consensus 862 ~fRh~DHrFEWTReEFr~Wae~LAer~GYsVefvGVGDg~ep~vG~~TQiAVFtR-~~~g~d~l~e~~~--~~~~~~W~w 938 (950)
T 3htx_A 862 KFRNHDHKFEWTREQFNQWASKLGKRHNYSVEFSGVGGSGEVEPGFASQIAIFRR-EASSVENVAESSM--QPYKVIWEW 938 (950)
T ss_dssp SCSCSSCSCCBCHHHHHHHHHHHHHHTTEEEEEEEESSCSSSTTCCSEEEEEEEE-SCC-----CCCCC--CCSCEEEEE
T ss_pred cccccCcceeecHHHHHHHHHHHHHhcCcEEEEEccCCCCCCCCCCccEEEEEEE-CCCchhhcchhhc--chHHHhccc
Confidence 6899999999999999999999999999999999999987778999999999999 6666777777665 899999999
Q ss_pred cCCCC
Q 004178 761 DGNGL 765 (770)
Q Consensus 761 ~~~~~ 765 (770)
.++..
T Consensus 939 ~~~~~ 943 (950)
T 3htx_A 939 KKEDV 943 (950)
T ss_dssp ECC--
T ss_pred CCccc
Confidence 88764
No 2
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.96 E-value=4.7e-28 Score=239.62 Aligned_cols=202 Identities=37% Similarity=0.616 Sum_probs=167.8
Q ss_pred CchHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCC
Q 004178 512 SPPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCT 591 (770)
Q Consensus 512 ~PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~ 591 (770)
..+++++|++++.+.+...++.+|||+|||+|.++..+++.+ +..+|+|+|+|+.+++.|++++.... . +..
T Consensus 10 ~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~--~-----~~~ 81 (219)
T 3jwg_A 10 KLNLNQQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDR--L-----PEM 81 (219)
T ss_dssp --CHHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGG--S-----CHH
T ss_pred CCcchHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhc--c-----ccc
Confidence 457999999999999988889999999999999999999876 45799999999999999998764210 0 000
Q ss_pred CCccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEecCCchhHHHhhhccccCCCCC
Q 004178 592 DVKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPNYEYNAILQKSSSTIQEDDP 671 (770)
Q Consensus 592 ~~~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTPN~efN~lf~~~~~~g~~e~p 671 (770)
...++++.++|+...+..+++||+|+|..+++|++++....+++++.++||||.+++.+|+..++..+...
T Consensus 82 ~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~--------- 152 (219)
T 3jwg_A 82 QRKRISLFQSSLVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNL--------- 152 (219)
T ss_dssp HHTTEEEEECCSSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT---------
T ss_pred cCcceEEEeCcccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhccc---------
Confidence 11279999999988877778999999999999999766678888899999999888999998877655322
Q ss_pred chhhhhccccccCCCcccccCHHHHHHHHHHHHHHCCcEEEEEeeeCCCCCCCCccceeeeeecCC
Q 004178 672 DEKTQLQSCKFRNHDHKFEWTRDQFNCWATELAARHNYSVEFSGVGGSGDREPGFASQIAVFRSRT 737 (770)
Q Consensus 672 de~~~~~~~~fRh~DHkfewTreEF~~Wa~~La~r~GY~VEF~GvG~~p~~e~Gf~TQiAVF~R~~ 737 (770)
....+++.+|.++|++++|+.|+..++.++||.|++.|+|..++ ..|+++|||||+|-.
T Consensus 153 ------~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~~~-~~g~~~qi~~~~~~~ 211 (219)
T 3jwg_A 153 ------FEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRFLQIGEIDD-EFGSPTQMGVFTLGA 211 (219)
T ss_dssp -----------GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEEEEESCCCT-TSCCSEEEEEEEECC
T ss_pred ------CcccccccCceeeecHHHHHHHHHHHHHHCCcEEEEEecCCccc-cCCCCeEEEEEeccC
Confidence 13457889999999999999999999999999999999998765 789999999999944
No 3
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.95 E-value=3.1e-27 Score=233.87 Aligned_cols=200 Identities=38% Similarity=0.667 Sum_probs=163.3
Q ss_pred hHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCC
Q 004178 514 PLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDV 593 (770)
Q Consensus 514 PL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~ 593 (770)
+++++|++++.+.+...++.+|||+|||+|.++..+++.+ +..+|+|+|+|+.+++.|++++.... . +....
T Consensus 12 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~--~-----~~~~~ 83 (217)
T 3jwh_A 12 SLNQQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLR--L-----PRNQW 83 (217)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCC--C-----CHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhc--C-----CcccC
Confidence 8999999999999988889999999999999999999876 44699999999999999998764210 0 00001
Q ss_pred ccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEecCCchhHHHhhhccccCCCCCch
Q 004178 594 KSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPNYEYNAILQKSSSTIQEDDPDE 673 (770)
Q Consensus 594 ~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTPN~efN~lf~~~~~~g~~e~pde 673 (770)
.++++.++|+...+...++||+|+|..+++|++++....+++++.++||||.+++.+|+..++..+...
T Consensus 84 ~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~----------- 152 (217)
T 3jwh_A 84 ERLQLIQGALTYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANL----------- 152 (217)
T ss_dssp TTEEEEECCTTSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-------------
T ss_pred cceEEEeCCcccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhccc-----------
Confidence 279999999987777778999999999999999776678888999999999888899998777766432
Q ss_pred hhhhccccccCCCcccccCHHHHHHHHHHHHHHCCcEEEEEeeeCCCCCCCCccceeeeeecCC
Q 004178 674 KTQLQSCKFRNHDHKFEWTRDQFNCWATELAARHNYSVEFSGVGGSGDREPGFASQIAVFRSRT 737 (770)
Q Consensus 674 ~~~~~~~~fRh~DHkfewTreEF~~Wa~~La~r~GY~VEF~GvG~~p~~e~Gf~TQiAVF~R~~ 737 (770)
....+++.+|.++|++++|+.|+..++.++||.|++.|+|...+ +.|+++||++|..+.
T Consensus 153 ----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~~~~~g~~~~-~~g~~~q~~~~~~~~ 211 (217)
T 3jwh_A 153 ----PAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQFQPIGEADP-EVGSPTQMAVFIHRG 211 (217)
T ss_dssp -------------CCSCBCHHHHHHHHHHHHHHSSEEEEECCCSCCCS-SSCCSEEEEEEEECC
T ss_pred ----ccccccccccccccCHHHHHHHHHHHHHHcCceEEEEecCCccC-CCCchheeEeeeecc
Confidence 13457889999999999999999999999999999999998755 789999999998754
No 4
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.68 E-value=5.1e-16 Score=153.80 Aligned_cols=168 Identities=15% Similarity=0.108 Sum_probs=119.4
Q ss_pred HHHHHHHHhh-cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEE
Q 004178 519 RVEYALQHIK-ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAV 597 (770)
Q Consensus 519 R~e~Il~~L~-~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Ve 597 (770)
+++++.+.+. ..++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.|++++. . +++
T Consensus 29 ~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~---------------~-~v~ 89 (250)
T 2p7i_A 29 MHPFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLK---------------D-GIT 89 (250)
T ss_dssp HHHHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSC---------------S-CEE
T ss_pred HHHHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhh---------------C-CeE
Confidence 4455666554 3467899999999999999999887 589999999999999988541 1 799
Q ss_pred EEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHH-HcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhh
Q 004178 598 LFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVL-SSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKT 675 (770)
Q Consensus 598 f~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~-rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~ 675 (770)
+.++|+.++ +.+++||+|+|.+++||++ ++ ..+++++. ++|||| .+++++||........... .+. .+..+
T Consensus 90 ~~~~d~~~~-~~~~~fD~v~~~~~l~~~~-~~-~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~-~~~--~~~~~- 162 (250)
T 2p7i_A 90 YIHSRFEDA-QLPRRYDNIVLTHVLEHID-DP-VALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVK-MGI--ISHNS- 162 (250)
T ss_dssp EEESCGGGC-CCSSCEEEEEEESCGGGCS-SH-HHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHH-TTS--SSSTT-
T ss_pred EEEccHHHc-CcCCcccEEEEhhHHHhhc-CH-HHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHH-cCc--cccch-
Confidence 999999887 4568899999999999998 33 45666799 999998 8899999976433221110 000 00000
Q ss_pred hhccc-cccCCCcccccCHHHHHHHHHHHHHHCCcEEE-EEeeeC
Q 004178 676 QLQSC-KFRNHDHKFEWTRDQFNCWATELAARHNYSVE-FSGVGG 718 (770)
Q Consensus 676 ~~~~~-~fRh~DHkfewTreEF~~Wa~~La~r~GY~VE-F~GvG~ 718 (770)
... ......|...++++++.+|+ +++||.+. ..++..
T Consensus 163 --~~~~~~~~~~~~~~~~~~~~~~~l----~~~Gf~~~~~~~~~~ 201 (250)
T 2p7i_A 163 --AVTEAEFAHGHRCTYALDTLERDA----SRAGLQVTYRSGIFF 201 (250)
T ss_dssp --CCCHHHHHTTCCCCCCHHHHHHHH----HHTTCEEEEEEEEEE
T ss_pred --hcccccccccccccCCHHHHHHHH----HHCCCeEEEEeeeEe
Confidence 000 01134566678999999554 67899874 444444
No 5
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.68 E-value=3.7e-16 Score=158.48 Aligned_cols=161 Identities=16% Similarity=0.233 Sum_probs=117.7
Q ss_pred HHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEE
Q 004178 518 QRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAV 597 (770)
Q Consensus 518 qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Ve 597 (770)
..++.+++.+...++.+|||+|||+|.++..|++.+ .+|+|+|+|+.|++.|++++.. .+.++++
T Consensus 24 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~------------~~~~~v~ 88 (260)
T 1vl5_A 24 SDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEG------------NGHQQVE 88 (260)
T ss_dssp CCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHH------------TTCCSEE
T ss_pred HHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHh------------cCCCceE
Confidence 345567777777788999999999999999999987 5999999999999999987642 2345799
Q ss_pred EEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhhh
Q 004178 598 LFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQ 676 (770)
Q Consensus 598 f~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~~ 676 (770)
+.++|++++++++++||+|+|..+++|++ +.. .+++++.++|||| .+++..+....+..+.... .
T Consensus 89 ~~~~d~~~l~~~~~~fD~V~~~~~l~~~~-d~~-~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~----------~-- 154 (260)
T 1vl5_A 89 YVQGDAEQMPFTDERFHIVTCRIAAHHFP-NPA-SFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFY----------N-- 154 (260)
T ss_dssp EEECCC-CCCSCTTCEEEEEEESCGGGCS-CHH-HHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHH----------H--
T ss_pred EEEecHHhCCCCCCCEEEEEEhhhhHhcC-CHH-HHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHH----------H--
Confidence 99999999998889999999999999998 443 5556799999998 6666554332222222110 0
Q ss_pred hccccccCCCcccccCHHHHHHHHHHHHHHCCcEEE
Q 004178 677 LQSCKFRNHDHKFEWTRDQFNCWATELAARHNYSVE 712 (770)
Q Consensus 677 ~~~~~fRh~DHkfewTreEF~~Wa~~La~r~GY~VE 712 (770)
.....+.+.|...++..++.+|+ .+.||.+.
T Consensus 155 -~~~~~~~~~~~~~~~~~~~~~~l----~~aGf~~~ 185 (260)
T 1vl5_A 155 -YVEKERDYSHHRAWKKSDWLKML----EEAGFELE 185 (260)
T ss_dssp -HHHHHHCTTCCCCCBHHHHHHHH----HHHTCEEE
T ss_pred -HHHHhcCccccCCCCHHHHHHHH----HHCCCeEE
Confidence 00112334455668888888554 66788763
No 6
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.67 E-value=2.4e-16 Score=158.65 Aligned_cols=128 Identities=13% Similarity=0.151 Sum_probs=106.4
Q ss_pred cCCchHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCC
Q 004178 510 LFSPPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVP 589 (770)
Q Consensus 510 ~F~PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~p 589 (770)
.+..+......+.+++.+...++.+|||+|||+|.++..+++..+ .+|+|+|+|+.+++.|++++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~------------ 99 (266)
T 3ujc_A 34 NYISSGGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYG--AHTHGIDICSNIVNMANERVS------------ 99 (266)
T ss_dssp TCCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHTCC------------
T ss_pred CccccchHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhh------------
Confidence 445556666666777777777788999999999999999998632 799999999999999988542
Q ss_pred CCCCccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 590 CTDVKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 590 r~~~~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
.. .++++.++|+.++++++++||+|++..+++|++.+....+++++.++|||| .+++.+++.
T Consensus 100 -~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 100 -GN-NKIIFEANDILTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp -SC-TTEEEEECCTTTCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred -cC-CCeEEEECccccCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 11 689999999999988889999999999999997667777888899999998 777777653
No 7
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.66 E-value=1.1e-15 Score=150.47 Aligned_cols=165 Identities=14% Similarity=0.209 Sum_probs=118.4
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
..+++.+...++.+|||+|||+|.++..|++.+ .+|+|+|+++.+++.|++++. .++++.+
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~----------------~~~~~~~ 95 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGNLTNKLLLAG---RTVYGIEPSREMRMIAKEKLP----------------KEFSITE 95 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSHHHHHHHHTT---CEEEEECSCHHHHHHHHHHSC----------------TTCCEES
T ss_pred HHHHHHhhccCCCeEEEeCCCCCHHHHHHHhCC---CeEEEEeCCHHHHHHHHHhCC----------------CceEEEe
Confidence 344555555678899999999999999999986 799999999999999988541 4789999
Q ss_pred CCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhhhhcc
Q 004178 601 GSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQS 679 (770)
Q Consensus 601 GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~~~~~ 679 (770)
+|+.+++.. +.||+|+|..+++|+++.....+++++.++|||| .+++.+|+......+...... ......
T Consensus 96 ~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~--------~~~~~~ 166 (220)
T 3hnr_A 96 GDFLSFEVP-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEA--------AKQRGF 166 (220)
T ss_dssp CCSSSCCCC-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHH--------HHHTTC
T ss_pred CChhhcCCC-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHH--------HHhCCC
Confidence 999998877 8999999999999999665555778899999998 888888875533322211000 000000
Q ss_pred cc-ccCCCcccccCHHHHHHHHHHHHHHCCcEEEEEeee
Q 004178 680 CK-FRNHDHKFEWTRDQFNCWATELAARHNYSVEFSGVG 717 (770)
Q Consensus 680 ~~-fRh~DHkfewTreEF~~Wa~~La~r~GY~VEF~GvG 717 (770)
.. .....+.+..+.+++. .+.+++||.+......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~----~~l~~aGf~v~~~~~~ 201 (220)
T 3hnr_A 167 HQLANDLQTEYYTRIPVMQ----TIFENNGFHVTFTRLN 201 (220)
T ss_dssp HHHHHHHHHSCCCBHHHHH----HHHHHTTEEEEEEECS
T ss_pred ccchhhcchhhcCCHHHHH----HHHHHCCCEEEEeecc
Confidence 00 0001112334777777 5667899998775544
No 8
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.66 E-value=7.1e-16 Score=150.26 Aligned_cols=139 Identities=14% Similarity=0.135 Sum_probs=112.1
Q ss_pred CCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCCCC
Q 004178 532 ATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSRLH 611 (770)
Q Consensus 532 ~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~d~ 611 (770)
+.+|||+|||+|.++..|++.+ .+|+|+|+++.|++.|+++. +++++.++|+.+++..++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~-----------------~~~~~~~~d~~~~~~~~~ 101 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLG---HQIEGLEPATRLVELARQTH-----------------PSVTFHHGTITDLSDSPK 101 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTT---CCEEEECCCHHHHHHHHHHC-----------------TTSEEECCCGGGGGGSCC
T ss_pred CCeEEEecCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhC-----------------CCCeEEeCcccccccCCC
Confidence 7899999999999999999986 69999999999999998743 368999999999888889
Q ss_pred CccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhhhhccccccCCCcccc
Q 004178 612 GFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQSCKFRNHDHKFE 690 (770)
Q Consensus 612 sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~~~~~~~fRh~DHkfe 690 (770)
.||+|++..+++|++.+....+++++.++|||| .+++.+++...... . .....+...
T Consensus 102 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~--------------------~--~~~~~~~~~ 159 (203)
T 3h2b_A 102 RWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEP--------------------M--YHPVATAYR 159 (203)
T ss_dssp CEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEE--------------------E--CCSSSCEEE
T ss_pred CeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhh--------------------h--hchhhhhcc
Confidence 999999999999998666777788899999998 88888877543100 0 111234556
Q ss_pred cCHHHHHHHHHHHHHHCCcEEEEEee
Q 004178 691 WTRDQFNCWATELAARHNYSVEFSGV 716 (770)
Q Consensus 691 wTreEF~~Wa~~La~r~GY~VEF~Gv 716 (770)
++.+++.++ ..++||.+.-...
T Consensus 160 ~~~~~~~~~----l~~~Gf~~~~~~~ 181 (203)
T 3h2b_A 160 WPLPELAQA----LETAGFQVTSSHW 181 (203)
T ss_dssp CCHHHHHHH----HHHTTEEEEEEEE
T ss_pred CCHHHHHHH----HHHCCCcEEEEEe
Confidence 899999854 4788998865443
No 9
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.66 E-value=2.1e-15 Score=150.25 Aligned_cols=155 Identities=16% Similarity=0.147 Sum_probs=116.7
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
+++.+.+. ++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|+++. ...++++.+
T Consensus 45 ~~l~~~~~--~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~---------------~~~~~~~~~ 104 (242)
T 3l8d_A 45 PFFEQYVK--KEAEVLDVGCGDGYGTYKLSRTG---YKAVGVDISEVMIQKGKERG---------------EGPDLSFIK 104 (242)
T ss_dssp HHHHHHSC--TTCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHTTT---------------CBTTEEEEE
T ss_pred HHHHHHcC--CCCeEEEEcCCCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhc---------------ccCCceEEE
Confidence 34444443 57899999999999999999986 79999999999999997742 235799999
Q ss_pred CCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhhhhcc
Q 004178 601 GSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQS 679 (770)
Q Consensus 601 GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~~~~~ 679 (770)
+|+.+++.++++||+|++..+++|++ +.. .+++++.++|||| .+++.+++.......... .
T Consensus 105 ~d~~~~~~~~~~fD~v~~~~~l~~~~-~~~-~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~----------------~ 166 (242)
T 3l8d_A 105 GDLSSLPFENEQFEAIMAINSLEWTE-EPL-RALNEIKRVLKSDGYACIAILGPTAKPRENSY----------------P 166 (242)
T ss_dssp CBTTBCSSCTTCEEEEEEESCTTSSS-CHH-HHHHHHHHHEEEEEEEEEEEECTTCGGGGGGG----------------G
T ss_pred cchhcCCCCCCCccEEEEcChHhhcc-CHH-HHHHHHHHHhCCCeEEEEEEcCCcchhhhhhh----------------h
Confidence 99999988889999999999999997 443 5566799999998 888888775433221111 1
Q ss_pred ccccCCCcccccCHHHHHHHHHHHHHHCCcEEE-EEeee
Q 004178 680 CKFRNHDHKFEWTRDQFNCWATELAARHNYSVE-FSGVG 717 (770)
Q Consensus 680 ~~fRh~DHkfewTreEF~~Wa~~La~r~GY~VE-F~GvG 717 (770)
..+....|...+++.++.. +..++||.+. ..++-
T Consensus 167 ~~~~~~~~~~~~~~~~~~~----~l~~~Gf~~~~~~~~~ 201 (242)
T 3l8d_A 167 RLYGKDVVCNTMMPWEFEQ----LVKEQGFKVVDGIGVY 201 (242)
T ss_dssp GGGTCCCSSCCCCHHHHHH----HHHHTTEEEEEEEEEE
T ss_pred hhccccccccCCCHHHHHH----HHHHcCCEEEEeeccc
Confidence 1233444666789999885 5578899874 34443
No 10
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.66 E-value=1.2e-15 Score=158.46 Aligned_cols=127 Identities=16% Similarity=0.168 Sum_probs=101.3
Q ss_pred hHHHHHHHHHHHHhh--cCCCCEEEEEcCccchHHHHHhcCCC-CCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCC
Q 004178 514 PLSKQRVEYALQHIK--ESCATTLVDFGCGSGSLLDSLLDYPT-ALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPC 590 (770)
Q Consensus 514 PL~~qR~e~Il~~L~--~~~~~rVLDIGCGtG~ll~~LAk~gg-p~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr 590 (770)
|.|....+.+...+. ..++.+|||+|||+|.++..|++..+ +..+|+|+|+|+.||+.|++++...
T Consensus 51 P~Y~~~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~----------- 119 (261)
T 4gek_A 51 PGYSNIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAY----------- 119 (261)
T ss_dssp TTHHHHHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTS-----------
T ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhh-----------
Confidence 556655555544443 34678999999999999999988642 3469999999999999999987532
Q ss_pred CCCccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 591 TDVKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 591 ~~~~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
....++++.++|+.++++ ..||+|++..+++|+++++...++++++++|||| .++++.+..
T Consensus 120 ~~~~~v~~~~~D~~~~~~--~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 120 KAPTPVDVIEGDIRDIAI--ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp CCSSCEEEEESCTTTCCC--CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred ccCceEEEeecccccccc--cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 234579999999998876 4699999999999999777777888899999999 777766543
No 11
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.65 E-value=2.7e-15 Score=149.30 Aligned_cols=174 Identities=14% Similarity=0.169 Sum_probs=121.5
Q ss_pred hHHHHHHHHHHHHhh-cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCC
Q 004178 514 PLSKQRVEYALQHIK-ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTD 592 (770)
Q Consensus 514 PL~~qR~e~Il~~L~-~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~ 592 (770)
|.+...++.+.+.+. ..++.+|||+|||+|.++..+++.. +..+|+|+|+|+.+++.|++++. .
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~--------------~ 90 (234)
T 3dtn_A 26 PCFDDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFR--------------G 90 (234)
T ss_dssp TTHHHHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTC--------------S
T ss_pred cCHHHHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhc--------------c
Confidence 444555566666665 4567899999999999999999875 34899999999999999998652 1
Q ss_pred CccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHh--------hhc
Q 004178 593 VKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQ--------KSS 663 (770)
Q Consensus 593 ~~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~--------~~~ 663 (770)
..++++.++|+.++++. +.||+|++..+++|++++....+++++.++|||| .+++.++......... ...
T Consensus 91 ~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (234)
T 3dtn_A 91 NLKVKYIEADYSKYDFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYV 169 (234)
T ss_dssp CTTEEEEESCTTTCCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccCCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHH
Confidence 22899999999998877 8999999999999998666666778899999998 7777776543222111 110
Q ss_pred cccCCCCCchhhhhccccccCCCcccccCHHHHHHHHHHHHHHCCcEEE
Q 004178 664 STIQEDDPDEKTQLQSCKFRNHDHKFEWTRDQFNCWATELAARHNYSVE 712 (770)
Q Consensus 664 ~~g~~e~pde~~~~~~~~fRh~DHkfewTreEF~~Wa~~La~r~GY~VE 712 (770)
... ..+.... ...+....|...++.+++.+ +.+++||.+.
T Consensus 170 ~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~----ll~~aGF~~v 209 (234)
T 3dtn_A 170 ENS--GLTEEEI---AAGYERSKLDKDIEMNQQLN----WLKEAGFRDV 209 (234)
T ss_dssp HTS--SCCHHHH---HTTC----CCCCCBHHHHHH----HHHHTTCEEE
T ss_pred Hhc--CCCHHHH---HHHHHhcccccccCHHHHHH----HHHHcCCCce
Confidence 000 0011000 01122335666788888885 5578899763
No 12
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.64 E-value=7.5e-16 Score=155.05 Aligned_cols=126 Identities=14% Similarity=0.234 Sum_probs=103.8
Q ss_pred CCchHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCC
Q 004178 511 FSPPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPC 590 (770)
Q Consensus 511 F~PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr 590 (770)
+..|.+....+.+++.+...++.+|||+|||+|.++..+++..+ .+|+|+|+|+.|++.|++++...
T Consensus 16 ~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~l~~a~~~~~~~----------- 82 (256)
T 1nkv_A 16 IHNPFTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHG--ITGTGIDMSSLFTAQAKRRAEEL----------- 82 (256)
T ss_dssp SSSSCCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTC--CEEEEEESCHHHHHHHHHHHHHT-----------
T ss_pred ccCCCCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcC--CeEEEEeCCHHHHHHHHHHHHhc-----------
Confidence 34467777778888888877889999999999999999988642 68999999999999999876421
Q ss_pred CCCccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 591 TDVKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 591 ~~~~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
....++++.++|+.++++ +++||+|+|..+++|++ +. ..+++++.++|||| .+++..|.
T Consensus 83 ~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~~~~~~~-~~-~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 83 GVSERVHFIHNDAAGYVA-NEKCDVAACVGATWIAG-GF-AGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp TCTTTEEEEESCCTTCCC-SSCEEEEEEESCGGGTS-SS-HHHHHHHTTSEEEEEEEEEEEEE
T ss_pred CCCcceEEEECChHhCCc-CCCCCEEEECCChHhcC-CH-HHHHHHHHHHcCCCeEEEEecCc
Confidence 122479999999999887 78999999999999998 33 35556799999998 77777765
No 13
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.64 E-value=7.6e-16 Score=152.58 Aligned_cols=125 Identities=9% Similarity=0.027 Sum_probs=92.9
Q ss_pred HHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcc
Q 004178 525 QHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSIT 604 (770)
Q Consensus 525 ~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDae 604 (770)
+.+...++.+|||+|||+|..+..|++.+ .+|+|+|+|+.|++.|+++...........-.......++++.++|+.
T Consensus 16 ~~l~~~~~~~vLD~GCG~G~~~~~la~~g---~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 92 (203)
T 1pjz_A 16 SSLNVVPGARVLVPLCGKSQDMSWLSGQG---YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF 92 (203)
T ss_dssp HHHCCCTTCEEEETTTCCSHHHHHHHHHC---CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred HhcccCCCCEEEEeCCCCcHhHHHHHHCC---CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc
Confidence 33444567899999999999999999986 799999999999999988652100000000000001257999999999
Q ss_pred ccCCCC-CCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 605 VFDSRL-HGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 605 dlp~~d-~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
++++.+ ++||+|++..+++|++++....+++++.++|||| .+++.+..
T Consensus 93 ~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~ 142 (203)
T 1pjz_A 93 ALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLE 142 (203)
T ss_dssp SSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEES
T ss_pred cCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEe
Confidence 998765 7899999999999999766777888899999998 54444433
No 14
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.64 E-value=4.4e-15 Score=149.00 Aligned_cols=150 Identities=9% Similarity=0.077 Sum_probs=115.1
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
.+++.+...++.+|||||||+|.++..|++.+ ..+|+|+|+++.+++.|++++. ...++++.++
T Consensus 84 ~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~--------------~~~~~~~~~~ 147 (254)
T 1xtp_A 84 NFIASLPGHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELA--------------GMPVGKFILA 147 (254)
T ss_dssp HHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTT--------------TSSEEEEEES
T ss_pred HHHHhhcccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhc--------------cCCceEEEEc
Confidence 34444455568899999999999999998764 2689999999999999998652 1157999999
Q ss_pred CccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhhhhccc
Q 004178 602 SITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQSC 680 (770)
Q Consensus 602 Daedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~~~~~~ 680 (770)
|+.++++.++.||+|+|..+++|++++....+++++.++|||| .+++.++...... .
T Consensus 148 d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~----------------------~ 205 (254)
T 1xtp_A 148 SMETATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDR----------------------F 205 (254)
T ss_dssp CGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CC----------------------E
T ss_pred cHHHCCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCccc----------------------c
Confidence 9999888778999999999999998666777788899999998 7777776422110 1
Q ss_pred cccCCCcccccCHHHHHHHHHHHHHHCCcEEEE
Q 004178 681 KFRNHDHKFEWTRDQFNCWATELAARHNYSVEF 713 (770)
Q Consensus 681 ~fRh~DHkfewTreEF~~Wa~~La~r~GY~VEF 713 (770)
.....++.+.++++++.+++ .++||.+.-
T Consensus 206 ~~~~~~~~~~~~~~~~~~~l----~~aGf~~~~ 234 (254)
T 1xtp_A 206 LVDKEDSSLTRSDIHYKRLF----NESGVRVVK 234 (254)
T ss_dssp EEETTTTEEEBCHHHHHHHH----HHHTCCEEE
T ss_pred eecccCCcccCCHHHHHHHH----HHCCCEEEE
Confidence 12233455668999998544 678998754
No 15
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.64 E-value=2.3e-15 Score=151.55 Aligned_cols=157 Identities=15% Similarity=0.254 Sum_probs=117.1
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
.+++.+...++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++... +..++++.++
T Consensus 12 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~------------~~~~v~~~~~ 76 (239)
T 1xxl_A 12 LMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEK------------GVENVRFQQG 76 (239)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHH------------TCCSEEEEEC
T ss_pred hHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHc------------CCCCeEEEec
Confidence 34466677788999999999999999999887 69999999999999999876431 3357999999
Q ss_pred CccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhhhhccc
Q 004178 602 SITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQSC 680 (770)
Q Consensus 602 Daedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~~~~~~ 680 (770)
|++++++.+++||+|+|..+++|++ +. ..+++++.++|||| .+++..+....+..+..+. . ...
T Consensus 77 d~~~~~~~~~~fD~v~~~~~l~~~~-~~-~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~------------~-~~~ 141 (239)
T 1xxl_A 77 TAESLPFPDDSFDIITCRYAAHHFS-DV-RKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFV------------N-HLN 141 (239)
T ss_dssp BTTBCCSCTTCEEEEEEESCGGGCS-CH-HHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHH------------H-HHH
T ss_pred ccccCCCCCCcEEEEEECCchhhcc-CH-HHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHH------------H-HHH
Confidence 9999988888999999999999998 43 35566799999998 7777665543222222110 0 011
Q ss_pred cccCCCcccccCHHHHHHHHHHHHHHCCcEEE
Q 004178 681 KFRNHDHKFEWTRDQFNCWATELAARHNYSVE 712 (770)
Q Consensus 681 ~fRh~DHkfewTreEF~~Wa~~La~r~GY~VE 712 (770)
..+.+.|...++.+++.+ +..+.||.+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~----ll~~aGf~~~ 169 (239)
T 1xxl_A 142 RLRDPSHVRESSLSEWQA----MFSANQLAYQ 169 (239)
T ss_dssp HHHCTTCCCCCBHHHHHH----HHHHTTEEEE
T ss_pred HhccccccCCCCHHHHHH----HHHHCCCcEE
Confidence 123345566678888884 4567898764
No 16
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.63 E-value=3.5e-15 Score=146.50 Aligned_cols=155 Identities=14% Similarity=0.157 Sum_probs=114.9
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCCC
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSRL 610 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~d 610 (770)
++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++ ++.+..+|+..++ .+
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~------------------~~~~~~~d~~~~~-~~ 100 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAG---FDVDATDGSPELAAEASRRL------------------GRPVRTMLFHQLD-AI 100 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHH------------------TSCCEECCGGGCC-CC
T ss_pred CCCcEEEECCCCCHHHHHHHHcC---CeEEEECCCHHHHHHHHHhc------------------CCceEEeeeccCC-CC
Confidence 47899999999999999999886 79999999999999998854 4667889998888 67
Q ss_pred CCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhhhhccccccCCCccc
Q 004178 611 HGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQSCKFRNHDHKF 689 (770)
Q Consensus 611 ~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~~~~~~~fRh~DHkf 689 (770)
+.||+|+|..+++|++.+....+++++.++|||| .+++.++..... .......+..
T Consensus 101 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-----------------------~~~~~~~~~~ 157 (211)
T 3e23_A 101 DAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGE-----------------------GRDKLARYYN 157 (211)
T ss_dssp SCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSC-----------------------EECTTSCEEC
T ss_pred CcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcc-----------------------cccccchhcc
Confidence 8999999999999999777778888999999998 777777664311 0011122345
Q ss_pred ccCHHHHHHHHHHHHHHCC-cEEEEEe--eeCCCCCCCCccceeeeeecC
Q 004178 690 EWTRDQFNCWATELAARHN-YSVEFSG--VGGSGDREPGFASQIAVFRSR 736 (770)
Q Consensus 690 ewTreEF~~Wa~~La~r~G-Y~VEF~G--vG~~p~~e~Gf~TQiAVF~R~ 736 (770)
.++++++..+ .+++| |.+.-.- -+..+. ......+.+..++
T Consensus 158 ~~~~~~~~~~----l~~aG~f~~~~~~~~~~~~~~--~~~~~wl~~~~~~ 201 (211)
T 3e23_A 158 YPSEEWLRAR----YAEAGTWASVAVESSEGKGFD--QELAQFLHVSVRK 201 (211)
T ss_dssp CCCHHHHHHH----HHHHCCCSEEEEEEEEEECTT--SCEEEEEEEEEEC
T ss_pred CCCHHHHHHH----HHhCCCcEEEEEEeccCCCCC--CCCceEEEEEEec
Confidence 6799999954 46789 8774322 222222 2234466666653
No 17
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.63 E-value=4.9e-15 Score=144.72 Aligned_cols=164 Identities=12% Similarity=0.186 Sum_probs=114.8
Q ss_pred HHHHHhh-cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 522 YALQHIK-ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 522 ~Il~~L~-~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
.+.+.+. ..++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++ . +..++++.+
T Consensus 36 ~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~-~---------------~~~~~~~~~ 96 (218)
T 3ou2_A 36 AALERLRAGNIRGDVLELASGTGYWTRHLSGLA---DRVTALDGSAEMIAEAGR-H---------------GLDNVEFRQ 96 (218)
T ss_dssp HHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHGG-G---------------CCTTEEEEE
T ss_pred HHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHh-c---------------CCCCeEEEe
Confidence 4445554 4456799999999999999999886 799999999999999976 1 235799999
Q ss_pred CCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhhhhcc
Q 004178 601 GSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQS 679 (770)
Q Consensus 601 GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~~~~~ 679 (770)
+|+.++ ..++.||+|+|..+++|++++....+++++.++|||| .+++.+++..... +..... .. ...+. .
T Consensus 97 ~d~~~~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-~~~~~~-~~---~~~~~---~ 167 (218)
T 3ou2_A 97 QDLFDW-TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERR-LEQQDD-SE---PEVAV---R 167 (218)
T ss_dssp CCTTSC-CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC-----------------CEE---E
T ss_pred cccccC-CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccc-cchhhh-cc---cccce---e
Confidence 999888 6678999999999999999665677888899999998 8888888763221 111100 00 00000 0
Q ss_pred ccccCCCc----ccccCHHHHHHHHHHHHHHCCcEEEEEeee
Q 004178 680 CKFRNHDH----KFEWTRDQFNCWATELAARHNYSVEFSGVG 717 (770)
Q Consensus 680 ~~fRh~DH----kfewTreEF~~Wa~~La~r~GY~VEF~GvG 717 (770)
..+....| ...++++++.+ +.+++||.|+.....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~----~l~~aGf~v~~~~~~ 205 (218)
T 3ou2_A 168 RTLQDGRSFRIVKVFRSPAELTE----RLTALGWSCSVDEVH 205 (218)
T ss_dssp EECTTSCEEEEECCCCCHHHHHH----HHHHTTEEEEEEEEE
T ss_pred eecCCcchhhHhhcCCCHHHHHH----HHHHCCCEEEeeecc
Confidence 11112222 23469999985 457889998665443
No 18
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.63 E-value=2.3e-15 Score=151.20 Aligned_cols=137 Identities=14% Similarity=0.201 Sum_probs=109.8
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc--C
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF--D 607 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl--p 607 (770)
.++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.|++ ++++..+|+.+. +
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~--------------------~~~~~~~d~~~~~~~ 96 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEG---IESIGVDINEDMIKFCEG--------------------KFNVVKSDAIEYLKS 96 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHT---CCEEEECSCHHHHHHHHT--------------------TSEEECSCHHHHHHT
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCC---CcEEEEECCHHHHHHHHh--------------------hcceeeccHHHHhhh
Confidence 356899999999999999999876 689999999999999865 277888998875 6
Q ss_pred CCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhhhhccccccCCC
Q 004178 608 SRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQSCKFRNHD 686 (770)
Q Consensus 608 ~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~~~~~~~fRh~D 686 (770)
+.+++||+|+|..+++|++++....+++++.++|||| .+++.+|+......+.. .+..+.
T Consensus 97 ~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~-------------------~~~~~~ 157 (240)
T 3dli_A 97 LPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLIN-------------------FYIDPT 157 (240)
T ss_dssp SCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHH-------------------HTTSTT
T ss_pred cCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHH-------------------HhcCcc
Confidence 6778999999999999999766778888899999998 88899998653222211 123345
Q ss_pred cccccCHHHHHHHHHHHHHHCCcEEE
Q 004178 687 HKFEWTRDQFNCWATELAARHNYSVE 712 (770)
Q Consensus 687 HkfewTreEF~~Wa~~La~r~GY~VE 712 (770)
|...++++++..|+ .++||.+.
T Consensus 158 ~~~~~~~~~l~~~l----~~aGf~~~ 179 (240)
T 3dli_A 158 HKKPVHPETLKFIL----EYLGFRDV 179 (240)
T ss_dssp CCSCCCHHHHHHHH----HHHTCEEE
T ss_pred ccccCCHHHHHHHH----HHCCCeEE
Confidence 67778999988554 67899874
No 19
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.62 E-value=6.7e-15 Score=151.44 Aligned_cols=161 Identities=15% Similarity=0.146 Sum_probs=114.1
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC-CC
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD-SR 609 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp-~~ 609 (770)
++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.|++++... ....++++.++|+.+++ +.
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~-----------~~~~~v~~~~~d~~~~~~~~ 133 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERG---HQVILCDLSAQMIDRAKQAAEAK-----------GVSDNMQFIHCAAQDVASHL 133 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHC------------CCGGGEEEEESCGGGTGGGC
T ss_pred CCCEEEEeCCcchHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhc-----------CCCcceEEEEcCHHHhhhhc
Confidence 36799999999999999999986 79999999999999999877421 12268999999999887 56
Q ss_pred CCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhh--hhccccccCCC
Q 004178 610 LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKT--QLQSCKFRNHD 686 (770)
Q Consensus 610 d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~--~~~~~~fRh~D 686 (770)
+++||+|+|..+++|++ +. ..+++++.++|||| .+++.+++........... +. -.+. ...........
T Consensus 134 ~~~fD~v~~~~~l~~~~-~~-~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~ 205 (285)
T 4htf_A 134 ETPVDLILFHAVLEWVA-DP-RSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVA--GN----FDYVQAGMPKKKKRTLS 205 (285)
T ss_dssp SSCEEEEEEESCGGGCS-CH-HHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHT--TC----HHHHHTTCCCC----CC
T ss_pred CCCceEEEECchhhccc-CH-HHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHh--cC----HHHHhhhccccccccCC
Confidence 78999999999999998 43 45666799999998 8888888754322111110 00 0000 00011112334
Q ss_pred cccccCHHHHHHHHHHHHHHCCcEEE-EEeee
Q 004178 687 HKFEWTRDQFNCWATELAARHNYSVE-FSGVG 717 (770)
Q Consensus 687 HkfewTreEF~~Wa~~La~r~GY~VE-F~GvG 717 (770)
+...++++++..|+ +++||.+. ..++.
T Consensus 206 ~~~~~~~~~l~~~l----~~aGf~v~~~~~~~ 233 (285)
T 4htf_A 206 PDYPRDPTQVYLWL----EEAGWQIMGKTGVR 233 (285)
T ss_dssp CSCCBCHHHHHHHH----HHTTCEEEEEEEES
T ss_pred CCCCCCHHHHHHHH----HHCCCceeeeeeEE
Confidence 55668999999554 78899874 45554
No 20
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.62 E-value=3.9e-15 Score=146.40 Aligned_cols=149 Identities=13% Similarity=0.099 Sum_probs=115.2
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
+.+++.+...++.+|||+|||+|.++..+++.+++..+|+|+|+++.+++.|++++... +..++++.+
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------~~~~~~~~~ 94 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKL------------GLKNVEVLK 94 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH------------TCTTEEEEE
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc------------CCCcEEEEe
Confidence 34556666777889999999999999999987645579999999999999999877431 334799999
Q ss_pred CCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhhhhcc
Q 004178 601 GSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQS 679 (770)
Q Consensus 601 GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~~~~~ 679 (770)
+|+.+++..++.||+|++..+++|++ +. ..+++++.++|||| .+++.+++....
T Consensus 95 ~d~~~~~~~~~~fD~v~~~~~l~~~~-~~-~~~l~~~~~~LkpgG~l~i~~~~~~~~----------------------- 149 (219)
T 3dh0_A 95 SEENKIPLPDNTVDFIFMAFTFHELS-EP-LKFLEELKRVAKPFAYLAIIDWKKEER----------------------- 149 (219)
T ss_dssp CBTTBCSSCSSCEEEEEEESCGGGCS-SH-HHHHHHHHHHEEEEEEEEEEEECSSCC-----------------------
T ss_pred cccccCCCCCCCeeEEEeehhhhhcC-CH-HHHHHHHHHHhCCCeEEEEEEeccccc-----------------------
Confidence 99999888888999999999999997 33 45666799999998 777776553211
Q ss_pred ccccCCCcccccCHHHHHHHHHHHHHHCCcEEE
Q 004178 680 CKFRNHDHKFEWTRDQFNCWATELAARHNYSVE 712 (770)
Q Consensus 680 ~~fRh~DHkfewTreEF~~Wa~~La~r~GY~VE 712 (770)
.....+...++.+++.. +..++||.+.
T Consensus 150 --~~~~~~~~~~~~~~~~~----~l~~~Gf~~~ 176 (219)
T 3dh0_A 150 --DKGPPPEEVYSEWEVGL----ILEDAGIRVG 176 (219)
T ss_dssp --SSSCCGGGSCCHHHHHH----HHHHTTCEEE
T ss_pred --ccCCchhcccCHHHHHH----HHHHCCCEEE
Confidence 11122334578888884 5578899863
No 21
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.62 E-value=8e-15 Score=145.51 Aligned_cols=124 Identities=21% Similarity=0.316 Sum_probs=100.9
Q ss_pred hHHHHHHHHHHHHhhcC--CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCC
Q 004178 514 PLSKQRVEYALQHIKES--CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCT 591 (770)
Q Consensus 514 PL~~qR~e~Il~~L~~~--~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~ 591 (770)
..+....+++.+.+... ++.+|||+|||+|.++..+++.+ .+|+|+|+++.|++.|++++.. .
T Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~s~~~~~~a~~~~~~------------~ 82 (246)
T 1y8c_A 18 VDYKKWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKF---KNTWAVDLSQEMLSEAENKFRS------------Q 82 (246)
T ss_dssp CCHHHHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGS---SEEEEECSCHHHHHHHHHHHHH------------T
T ss_pred ccHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCC---CcEEEEECCHHHHHHHHHHHhh------------c
Confidence 34555566666666554 67899999999999999999886 7899999999999999987642 1
Q ss_pred CCccEEEEECCccccCCCCCCccEEEecc-ccccCCh-hHHHHHHHHHHHcccCC-EEEEEecCCc
Q 004178 592 DVKSAVLFDGSITVFDSRLHGFDIGTCLE-VIEHMEE-DEASQFGNIVLSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 592 ~~~~Vef~~GDaedlp~~d~sFDlVVc~e-VLEHL~~-d~~~~fleeI~rvLKPG-~LIISTPN~e 654 (770)
+ .++++.++|+.+++.. +.||+|++.. +++|++. +....+++++.++|||| .+++.+++..
T Consensus 83 ~-~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 146 (246)
T 1y8c_A 83 G-LKPRLACQDISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYY 146 (246)
T ss_dssp T-CCCEEECCCGGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHH
T ss_pred C-CCeEEEecccccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHH
Confidence 1 2789999999988776 8899999998 9999942 45567777899999998 8888888743
No 22
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.61 E-value=8.3e-15 Score=147.70 Aligned_cols=115 Identities=14% Similarity=0.184 Sum_probs=96.7
Q ss_pred HHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEE
Q 004178 520 VEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLF 599 (770)
Q Consensus 520 ~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~ 599 (770)
...+.+.+...++.+|||+|||+|.++..+++.+. .+|+|+|+|+.+++.|++++. ..++++.
T Consensus 33 ~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~---------------~~~~~~~ 95 (253)
T 3g5l_A 33 WHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGA--KKVLGIDLSERMLTEAKRKTT---------------SPVVCYE 95 (253)
T ss_dssp HHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHCC---------------CTTEEEE
T ss_pred HHHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhhc---------------cCCeEEE
Confidence 33455666666789999999999999999999872 399999999999999988541 3579999
Q ss_pred ECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 600 DGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 600 ~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
++|+.+++..+++||+|+|..+++|++ +. ..+++++.++|||| .+++++++.
T Consensus 96 ~~d~~~~~~~~~~fD~v~~~~~l~~~~-~~-~~~l~~~~~~LkpgG~l~~~~~~~ 148 (253)
T 3g5l_A 96 QKAIEDIAIEPDAYNVVLSSLALHYIA-SF-DDICKKVYINLKSSGSFIFSVEHP 148 (253)
T ss_dssp ECCGGGCCCCTTCEEEEEEESCGGGCS-CH-HHHHHHHHHHEEEEEEEEEEEECH
T ss_pred EcchhhCCCCCCCeEEEEEchhhhhhh-hH-HHHHHHHHHHcCCCcEEEEEeCCC
Confidence 999999988889999999999999996 33 45666799999998 888888773
No 23
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.61 E-value=1.7e-14 Score=144.86 Aligned_cols=142 Identities=18% Similarity=0.218 Sum_probs=110.1
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCCC
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSRL 610 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~d 610 (770)
++.+|||||||+|.++..|++.+ ..+|+|+|+++.+++.|++++... +..++++.++|+.++++.+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~------------~~~~~~~~~~d~~~~~~~~ 144 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEE------------GKRVRNYFCCGLQDFTPEP 144 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGG------------GGGEEEEEECCGGGCCCCS
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhc------------CCceEEEEEcChhhcCCCC
Confidence 47899999999999999998875 269999999999999999876421 1347899999999988877
Q ss_pred CCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhhhhccccccCCCccc
Q 004178 611 HGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQSCKFRNHDHKF 689 (770)
Q Consensus 611 ~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~~~~~~~fRh~DHkf 689 (770)
+.||+|++..+++|++++....+++++.++|||| .+++.++...... .+...++.+
T Consensus 145 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~-----------------------~~~~~~~~~ 201 (241)
T 2ex4_A 145 DSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGV-----------------------ILDDVDSSV 201 (241)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSE-----------------------EEETTTTEE
T ss_pred CCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcc-----------------------eecccCCcc
Confidence 7899999999999999666667788899999998 7777776533200 011223344
Q ss_pred ccCHHHHHHHHHHHHHHCCcEEEE
Q 004178 690 EWTRDQFNCWATELAARHNYSVEF 713 (770)
Q Consensus 690 ewTreEF~~Wa~~La~r~GY~VEF 713 (770)
..+.+++.+ +..++||.+.-
T Consensus 202 ~~~~~~~~~----~l~~aGf~~~~ 221 (241)
T 2ex4_A 202 CRDLDVVRR----IICSAGLSLLA 221 (241)
T ss_dssp EEBHHHHHH----HHHHTTCCEEE
T ss_pred cCCHHHHHH----HHHHcCCeEEE
Confidence 458888885 45678998744
No 24
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.60 E-value=9.3e-15 Score=140.77 Aligned_cols=114 Identities=13% Similarity=0.121 Sum_probs=95.5
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
.+.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++... +..++++.++
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~------------~~~~~~~~~~ 87 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAANG---YDVDAWDKNAMSIANVERIKSIE------------NLDNLHTRVV 87 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHH------------TCTTEEEEEC
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHhC------------CCCCcEEEEc
Confidence 44555666678899999999999999999886 79999999999999999876421 2347999999
Q ss_pred CccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEec
Q 004178 602 SITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 602 Daedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
|+.+++. ++.||+|++..+++|++++....+++++.++|||| .+++.++
T Consensus 88 d~~~~~~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 88 DLNNLTF-DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp CGGGCCC-CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred chhhCCC-CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 9999887 78999999999999998777778888899999998 5555444
No 25
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.60 E-value=8.3e-15 Score=151.30 Aligned_cols=129 Identities=16% Similarity=0.139 Sum_probs=95.6
Q ss_pred HHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCC-------C
Q 004178 519 RVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPC-------T 591 (770)
Q Consensus 519 R~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr-------~ 591 (770)
..+++...+...++.+|||+|||+|..+..|++.+ .+|+|||+|+.|++.|+++....... ...... .
T Consensus 56 l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G---~~V~gvD~S~~~i~~a~~~~~~~~~~--~~~~~~~~~~~~~~ 130 (252)
T 2gb4_A 56 LKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRG---HTVVGVEISEIGIREFFAEQNLSYTE--EPLAEIAGAKVFKS 130 (252)
T ss_dssp HHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTT---CEEEEECSCHHHHHHHHHHTTCCEEE--EECTTSTTCEEEEE
T ss_pred HHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCC---CeEEEEECCHHHHHHHHHhccccccc--cccccccccccccc
Confidence 33444443333467899999999999999999987 79999999999999997754200000 000000 0
Q ss_pred CCccEEEEECCccccCCCC-CCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 592 DVKSAVLFDGSITVFDSRL-HGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 592 ~~~~Vef~~GDaedlp~~d-~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
...++++.++|+.++++.+ +.||+|++..+++|++++....+++++.++|||| .+++.+..
T Consensus 131 ~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~ 193 (252)
T 2gb4_A 131 SSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLS 193 (252)
T ss_dssp TTSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CCCceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 1357999999999988764 8999999999999999777777888899999999 65555444
No 26
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.59 E-value=1.6e-14 Score=147.05 Aligned_cols=120 Identities=16% Similarity=0.205 Sum_probs=98.2
Q ss_pred HHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEE
Q 004178 518 QRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAV 597 (770)
Q Consensus 518 qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Ve 597 (770)
...+.+++.+...++.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.|++++... ....+++
T Consensus 48 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~-----------~~~~~~~ 114 (273)
T 3bus_A 48 RLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARD--VRVTGISISRPQVNQANARATAA-----------GLANRVT 114 (273)
T ss_dssp HHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSC--CEEEEEESCHHHHHHHHHHHHHT-----------TCTTTEE
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHhc-----------CCCcceE
Confidence 3445566667767789999999999999999987542 79999999999999999876431 1234799
Q ss_pred EEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 598 LFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 598 f~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
+..+|+.++++++++||+|++..+++|++ +. ..+++++.++|||| .+++.+++
T Consensus 115 ~~~~d~~~~~~~~~~fD~v~~~~~l~~~~-~~-~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 115 FSYADAMDLPFEDASFDAVWALESLHHMP-DR-GRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp EEECCTTSCCSCTTCEEEEEEESCTTTSS-CH-HHHHHHHHTTEEEEEEEEEEEEE
T ss_pred EEECccccCCCCCCCccEEEEechhhhCC-CH-HHHHHHHHHHcCCCeEEEEEEee
Confidence 99999999988888999999999999997 33 45666799999998 77777765
No 27
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.59 E-value=9.5e-15 Score=143.61 Aligned_cols=122 Identities=16% Similarity=0.291 Sum_probs=99.5
Q ss_pred hHHHHHHHHHHH-HhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCC
Q 004178 514 PLSKQRVEYALQ-HIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTD 592 (770)
Q Consensus 514 PL~~qR~e~Il~-~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~ 592 (770)
+....++..++. .+...++.+|||+|||+|.++..|++.+ .+|+|+|+++.+++.|++++. .
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~--------------~ 95 (216)
T 3ofk_A 33 PFERERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTK--------------R 95 (216)
T ss_dssp HHHHHHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTT--------------T
T ss_pred HhHHHHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcc--------------c
Confidence 444435544444 5566677899999999999999999987 799999999999999998653 1
Q ss_pred CccEEEEECCccccCCCCCCccEEEeccccccCCh-hHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 593 VKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEE-DEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 593 ~~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~-d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
..++++.++|+.+++ .++.||+|+|..+++|+++ +....+++++.++|||| .+++++|..
T Consensus 96 ~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 96 WSHISWAATDILQFS-TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp CSSEEEEECCTTTCC-CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CCCeEEEEcchhhCC-CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 238999999999988 5689999999999999994 44456677899999998 888888863
No 28
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.59 E-value=9.3e-15 Score=151.01 Aligned_cols=122 Identities=13% Similarity=0.124 Sum_probs=99.6
Q ss_pred HHHHHHHHHHh----hcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCC
Q 004178 517 KQRVEYALQHI----KESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTD 592 (770)
Q Consensus 517 ~qR~e~Il~~L----~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~ 592 (770)
....+.+++.+ ...++.+|||+|||+|.++..|++..+ .+|+|+|+|+.+++.|++++... ..
T Consensus 64 ~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~-----------~~ 130 (297)
T 2o57_A 64 LRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQA-----------GL 130 (297)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHH-----------TC
T ss_pred HHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhc-----------CC
Confidence 34445666666 556788999999999999999998732 69999999999999999876431 12
Q ss_pred CccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 593 VKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 593 ~~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
..++++.++|+.++++++++||+|++..+++|+++ ...+++++.++|||| .+++.+++.
T Consensus 131 ~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 131 ADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPD--KLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp TTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CcceEEEEcCcccCCCCCCCEeEEEecchhhhcCC--HHHHHHHHHHHcCCCeEEEEEEecc
Confidence 35799999999999988889999999999999984 456667899999998 788877753
No 29
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.58 E-value=6.8e-15 Score=150.03 Aligned_cols=125 Identities=18% Similarity=0.102 Sum_probs=100.8
Q ss_pred CchHHHHHHHHHHHHhh-cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCC
Q 004178 512 SPPLSKQRVEYALQHIK-ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPC 590 (770)
Q Consensus 512 ~PPL~~qR~e~Il~~L~-~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr 590 (770)
..|........+++.+. ..++.+|||||||+|.++..+++.+ ..+|+|+|+|+.+++.|++++...
T Consensus 26 ~~~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~----------- 92 (267)
T 3kkz_A 26 QGPGSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHV--TGQVTGLDFLSGFIDIFNRNARQS----------- 92 (267)
T ss_dssp SSSCCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTC--SSEEEEEESCHHHHHHHHHHHHHT-----------
T ss_pred cCCCCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhcc--CCEEEEEeCCHHHHHHHHHHHHHc-----------
Confidence 33455555556666665 4568899999999999999999985 369999999999999999877531
Q ss_pred CCCccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 591 TDVKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 591 ~~~~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
....++++.++|+.++++.++.||+|+|..+++|++ . ..+++++.++|||| .+++.+++
T Consensus 93 ~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~~--~-~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 93 GLQNRVTGIVGSMDDLPFRNEELDLIWSEGAIYNIG--F-ERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp TCTTTEEEEECCTTSCCCCTTCEEEEEESSCGGGTC--H-HHHHHHHGGGEEEEEEEEEEEEE
T ss_pred CCCcCcEEEEcChhhCCCCCCCEEEEEEcCCceecC--H-HHHHHHHHHHcCCCCEEEEEEee
Confidence 223469999999999888788999999999999994 3 35566799999998 88887765
No 30
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.58 E-value=1.5e-15 Score=158.68 Aligned_cols=186 Identities=18% Similarity=0.321 Sum_probs=115.2
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhccc--------------------------
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKL-------------------------- 584 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~-------------------------- 584 (770)
++.+|||||||+|.++..|++.. +..+|+|+|+++.|++.|++++........
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~-~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKW-GPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHT-CCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 57899999999999999999875 237999999999999999987543210000
Q ss_pred --------------------ccCCCCCCCccEEEEECCccccC-----CCCCCccEEEeccccccC----ChhHHHHHHH
Q 004178 585 --------------------DAAVPCTDVKSAVLFDGSITVFD-----SRLHGFDIGTCLEVIEHM----EEDEASQFGN 635 (770)
Q Consensus 585 --------------------~~l~pr~~~~~Vef~~GDaedlp-----~~d~sFDlVVc~eVLEHL----~~d~~~~fle 635 (770)
........+.+|+|.++|+...+ +..+.||+|+|..+++|+ .++....+++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 00000011248999999987654 456899999999999888 4456777888
Q ss_pred HHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhhhhccccccCCCcccccCHHHHHHHHHHHHHHCCcEE-EE
Q 004178 636 IVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQSCKFRNHDHKFEWTRDQFNCWATELAARHNYSV-EF 713 (770)
Q Consensus 636 eI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~~~~~~~fRh~DHkfewTreEF~~Wa~~La~r~GY~V-EF 713 (770)
+++++|||| .+++.+++.. .+.... ... ......-+...+.+++|..|+.. .+.||.. +.
T Consensus 205 ~~~~~LkpGG~lil~~~~~~--~y~~~~------~~~--------~~~~~~~~~~~~~p~~~~~~L~~--~~~GF~~~~~ 266 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQPWS--SYGKRK------TLT--------ETIYKNYYRIQLKPEQFSSYLTS--PDVGFSSYEL 266 (292)
T ss_dssp HHHHHEEEEEEEEEECCCHH--HHHTTT------TSC--------HHHHHHHHHCCCCGGGHHHHHTS--TTTCCCEEEE
T ss_pred HHHHHhCCCcEEEEecCCch--hhhhhh------ccc--------HHHHhhhhcEEEcHHHHHHHHHh--cCCCceEEEE
Confidence 899999999 6666655422 221110 000 00011112344668889976631 1279954 55
Q ss_pred EeeeCCCCCCCCccceeeeeecCC
Q 004178 714 SGVGGSGDREPGFASQIAVFRSRT 737 (770)
Q Consensus 714 ~GvG~~p~~e~Gf~TQiAVF~R~~ 737 (770)
.+.. .....||..++-+|+|+.
T Consensus 267 ~~~~--~~~~~g~~r~i~~~~k~~ 288 (292)
T 3g07_A 267 VATP--HNTSKGFQRPVYLFHKAR 288 (292)
T ss_dssp C-------------CCCEEEECCC
T ss_pred eccC--CCCCCCccceEEEEEcCC
Confidence 4432 233579999999999964
No 31
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.58 E-value=7.2e-14 Score=139.59 Aligned_cols=158 Identities=13% Similarity=0.147 Sum_probs=113.9
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCCC
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSRL 610 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~d 610 (770)
++.+|||+|||+|.++..|++.+ .+|+|+|+|+.+++.|++++... ....++++.++|+.+++. .
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~-----------~~~~~v~~~~~d~~~~~~-~ 130 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPE---RFVVGLDISESALAKANETYGSS-----------PKAEYFSFVKEDVFTWRP-T 130 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTT---EEEEEECSCHHHHHHHHHHHTTS-----------GGGGGEEEECCCTTTCCC-S
T ss_pred CCCCEEEeCCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHhhcc-----------CCCcceEEEECchhcCCC-C
Confidence 34699999999999999998866 89999999999999999876421 123579999999998774 4
Q ss_pred CCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhhhhccccccCCCccc
Q 004178 611 HGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQSCKFRNHDHKF 689 (770)
Q Consensus 611 ~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~~~~~~~fRh~DHkf 689 (770)
..||+|++..+++|++++....+++++.++|||| .+++...+.... ...+.+
T Consensus 131 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~---------------------------~~~~~~ 183 (235)
T 3lcc_A 131 ELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDH---------------------------VGGPPY 183 (235)
T ss_dssp SCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCC---------------------------CSCSSC
T ss_pred CCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEeccccc---------------------------CCCCCc
Confidence 6999999999999998777788888999999998 666654432200 001223
Q ss_pred ccCHHHHHHHHHHHHHHCCcEEEE-EeeeCCCCCCCCccceeeeeec
Q 004178 690 EWTRDQFNCWATELAARHNYSVEF-SGVGGSGDREPGFASQIAVFRS 735 (770)
Q Consensus 690 ewTreEF~~Wa~~La~r~GY~VEF-~GvG~~p~~e~Gf~TQiAVF~R 735 (770)
.++++++.. +..++||.+.. ..+........|. -.+++.++
T Consensus 184 ~~~~~~~~~----~l~~~Gf~~~~~~~~~~~~~~~~g~-e~~~~~~~ 225 (235)
T 3lcc_A 184 KVDVSTFEE----VLVPIGFKAVSVEENPHAIPTRKGK-EKLGRWKK 225 (235)
T ss_dssp CCCHHHHHH----HHGGGTEEEEEEEECTTCCTTTTTS-CEEEEEEE
T ss_pred cCCHHHHHH----HHHHcCCeEEEEEecCCccccccCH-HHHhhhhh
Confidence 478888885 44688998744 3333332223332 24444444
No 32
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.58 E-value=3.3e-14 Score=146.14 Aligned_cols=120 Identities=17% Similarity=0.312 Sum_probs=97.4
Q ss_pred HHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEE
Q 004178 519 RVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVL 598 (770)
Q Consensus 519 R~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef 598 (770)
.++.+++.+...++.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.|++++.. .....++++
T Consensus 52 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~-----------~~~~~~~~~ 118 (287)
T 1kpg_A 52 KIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVAN-----------SENLRSKRV 118 (287)
T ss_dssp HHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHT-----------CCCCSCEEE
T ss_pred HHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHh-----------cCCCCCeEE
Confidence 445566666667788999999999999999985432 6999999999999999987742 122357999
Q ss_pred EECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCc
Q 004178 599 FDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 599 ~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~e 654 (770)
..+|+.+++ +.||+|++.++++|++++....+++++.++|||| .+++.+++..
T Consensus 119 ~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 119 LLAGWEQFD---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp EESCGGGCC---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred EECChhhCC---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 999998776 7899999999999997555667777899999998 8888887754
No 33
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.58 E-value=7.4e-15 Score=147.86 Aligned_cols=123 Identities=18% Similarity=0.175 Sum_probs=98.9
Q ss_pred hHHHHHHHHHHHHh-hcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCC
Q 004178 514 PLSKQRVEYALQHI-KESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTD 592 (770)
Q Consensus 514 PL~~qR~e~Il~~L-~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~ 592 (770)
|........+++.+ ...++.+|||+|||+|.++..+++..+ .+|+|+|+|+.+++.|++++... ..
T Consensus 28 ~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~-----------~~ 94 (257)
T 3f4k_A 28 PGSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKA-----------NC 94 (257)
T ss_dssp SCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHT-----------TC
T ss_pred CCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHc-----------CC
Confidence 44445555566665 345678999999999999999999873 49999999999999999877431 12
Q ss_pred CccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 593 VKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 593 ~~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
..++++.++|+.++++.+++||+|+|..+++|++ ...+++++.++|||| .+++.+++
T Consensus 95 ~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~---~~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 95 ADRVKGITGSMDNLPFQNEELDLIWSEGAIYNIG---FERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp TTTEEEEECCTTSCSSCTTCEEEEEEESCSCCCC---HHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred CCceEEEECChhhCCCCCCCEEEEEecChHhhcC---HHHHHHHHHHHcCCCcEEEEEEee
Confidence 3359999999999988889999999999999994 235566799999998 88888765
No 34
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.57 E-value=2.2e-14 Score=144.33 Aligned_cols=104 Identities=10% Similarity=0.117 Sum_probs=87.9
Q ss_pred hcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 528 KESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 528 ~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.|++++. ....++++.++|+.+++
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~-------------~~~~~~~~~~~d~~~~~ 99 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIARG---YRYIALDADAAMLEVFRQKIA-------------GVDRKVQVVQADARAIP 99 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTTT---CEEEEEESCHHHHHHHHHHTT-------------TSCTTEEEEESCTTSCC
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhh-------------ccCCceEEEEcccccCC
Confidence 34567899999999999999999886 799999999999999988651 23458999999999988
Q ss_pred CCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEE
Q 004178 608 SRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVS 649 (770)
Q Consensus 608 ~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIS 649 (770)
+.+++||+|++..+++|++ +. ..+++++.++|||| .+++.
T Consensus 100 ~~~~~fD~v~~~~~l~~~~-~~-~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 100 LPDESVHGVIVVHLWHLVP-DW-PKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp SCTTCEEEEEEESCGGGCT-TH-HHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCeeEEEECCchhhcC-CH-HHHHHHHHHHCCCCcEEEEE
Confidence 8788999999999999998 33 45566799999998 55555
No 35
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.57 E-value=9e-15 Score=153.35 Aligned_cols=124 Identities=13% Similarity=0.057 Sum_probs=101.1
Q ss_pred hHHHHHHHHHHHHhh-cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCC
Q 004178 514 PLSKQRVEYALQHIK-ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTD 592 (770)
Q Consensus 514 PL~~qR~e~Il~~L~-~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~ 592 (770)
.+.....+.+++.+. ..++.+|||+|||+|.++..|++..+ .+|+|+|+++.+++.|++++... ..
T Consensus 99 ~~~~~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~-----------~~ 165 (312)
T 3vc1_A 99 RLESAQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFG--SRVEGVTLSAAQADFGNRRAREL-----------RI 165 (312)
T ss_dssp HHHHHHHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHT-----------TC
T ss_pred hHHHHHHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHc-----------CC
Confidence 345555566777776 56788999999999999999998731 79999999999999999877531 12
Q ss_pred CccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 593 VKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 593 ~~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
..++++.++|+.++++.++.||+|++..+++|++ ...+++++.++|||| .+++.+++.
T Consensus 166 ~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 166 DDHVRSRVCNMLDTPFDKGAVTASWNNESTMYVD---LHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp TTTEEEEECCTTSCCCCTTCEEEEEEESCGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCceEEEECChhcCCCCCCCEeEEEECCchhhCC---HHHHHHHHHHHcCCCcEEEEEEccc
Confidence 3479999999999988889999999999999995 456667899999998 777777653
No 36
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.57 E-value=1.5e-14 Score=140.71 Aligned_cols=129 Identities=15% Similarity=0.076 Sum_probs=104.6
Q ss_pred cCCchHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCC
Q 004178 510 LFSPPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVP 589 (770)
Q Consensus 510 ~F~PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~p 589 (770)
.++.|++....+.+.+.+...++ +|||+|||+|.++..+++.. ..+|+|+|+++.+++.|++++...
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~~~~a~~~~~~~---------- 89 (219)
T 3dlc_A 23 TLFAPIYPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQS--DFSIRALDFSKHMNEIALKNIADA---------- 89 (219)
T ss_dssp TTTTTHHHHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHS--EEEEEEEESCHHHHHHHHHHHHHT----------
T ss_pred HhhccccHHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcC--CCeEEEEECCHHHHHHHHHHHHhc----------
Confidence 35567777777777777765545 99999999999999999873 379999999999999999887531
Q ss_pred CCCCccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCc
Q 004178 590 CTDVKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 590 r~~~~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~e 654 (770)
....++++.++|+.++++.++.||+|++..+++|++ +. ..+++++.++|||| .+++..+...
T Consensus 90 -~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~-~~-~~~l~~~~~~L~pgG~l~~~~~~~~ 152 (219)
T 3dlc_A 90 -NLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWE-DV-ATAFREIYRILKSGGKTYIGGGFGN 152 (219)
T ss_dssp -TCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGCS-CH-HHHHHHHHHHEEEEEEEEEEECCSS
T ss_pred -cccCceEEEEcCHHHCCCCcccccEEEECchHhhcc-CH-HHHHHHHHHhCCCCCEEEEEeccCc
Confidence 123479999999999988889999999999999996 33 45666799999998 7777766644
No 37
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.57 E-value=2.5e-14 Score=142.27 Aligned_cols=113 Identities=19% Similarity=0.243 Sum_probs=94.7
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
.+.+.+...++.+|||+|||+|.++..+++.+. .+|+|+|+++.+++.|+++.. ..++++.++
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~---------------~~~~~~~~~ 96 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGA--SYVLGLDLSEKMLARARAAGP---------------DTGITYERA 96 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHTSC---------------SSSEEEEEC
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHhcc---------------cCCceEEEc
Confidence 455666666789999999999999999998861 399999999999999987431 137999999
Q ss_pred CccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 602 SITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 602 Daedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
|+.+++..++.||+|++..+++|++ +. ..+++++.++|||| .+++.+++.
T Consensus 97 d~~~~~~~~~~fD~v~~~~~l~~~~-~~-~~~l~~~~~~L~pgG~l~~~~~~~ 147 (243)
T 3bkw_A 97 DLDKLHLPQDSFDLAYSSLALHYVE-DV-ARLFRTVHQALSPGGHFVFSTEHP 147 (243)
T ss_dssp CGGGCCCCTTCEEEEEEESCGGGCS-CH-HHHHHHHHHHEEEEEEEEEEEECH
T ss_pred ChhhccCCCCCceEEEEeccccccc-hH-HHHHHHHHHhcCcCcEEEEEeCCc
Confidence 9999887778999999999999997 33 45566799999998 888888874
No 38
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.55 E-value=8.9e-14 Score=144.68 Aligned_cols=120 Identities=16% Similarity=0.223 Sum_probs=97.4
Q ss_pred HHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEE
Q 004178 519 RVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVL 598 (770)
Q Consensus 519 R~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef 598 (770)
.++.+++.+...++.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.|++++... ....++++
T Consensus 60 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~-----------~~~~~v~~ 126 (302)
T 3hem_A 60 KRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEV-----------DSPRRKEV 126 (302)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHS-----------CCSSCEEE
T ss_pred HHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhc-----------CCCCceEE
Confidence 444566666667788999999999999999998732 79999999999999999877431 22347999
Q ss_pred EECCccccCCCCCCccEEEeccccccCCh-------hHHHHHHHHHHHcccCC-EEEEEecCCc
Q 004178 599 FDGSITVFDSRLHGFDIGTCLEVIEHMEE-------DEASQFGNIVLSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 599 ~~GDaedlp~~d~sFDlVVc~eVLEHL~~-------d~~~~fleeI~rvLKPG-~LIISTPN~e 654 (770)
..+|+.++ ++.||+|++..+++|+++ +....+++++.++|||| .+++.++...
T Consensus 127 ~~~d~~~~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 127 RIQGWEEF---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp EECCGGGC---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred EECCHHHc---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 99999877 589999999999999953 45567777899999998 7777776544
No 39
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.55 E-value=2.2e-14 Score=149.04 Aligned_cols=119 Identities=15% Similarity=0.211 Sum_probs=97.2
Q ss_pred HHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCC---ccE
Q 004178 520 VEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDV---KSA 596 (770)
Q Consensus 520 ~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~---~~V 596 (770)
...+++.+.. .+.+|||||||+|.++..|++.+ .+|+|+|+|+.+++.|++++.. .+. .++
T Consensus 72 ~~~~~~~~~~-~~~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~------------~~~~~~~~v 135 (299)
T 3g2m_A 72 AREFATRTGP-VSGPVLELAAGMGRLTFPFLDLG---WEVTALELSTSVLAAFRKRLAE------------APADVRDRC 135 (299)
T ss_dssp HHHHHHHHCC-CCSCEEEETCTTTTTHHHHHTTT---CCEEEEESCHHHHHHHHHHHHT------------SCHHHHTTE
T ss_pred HHHHHHhhCC-CCCcEEEEeccCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHhh------------cccccccce
Confidence 3344455544 34599999999999999999986 7899999999999999987742 111 479
Q ss_pred EEEECCccccCCCCCCccEEEec-cccccCChhHHHHHHHHHHHcccCC-EEEEEecCCch
Q 004178 597 VLFDGSITVFDSRLHGFDIGTCL-EVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEY 655 (770)
Q Consensus 597 ef~~GDaedlp~~d~sFDlVVc~-eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ef 655 (770)
++.++|+.++++ ++.||+|+|. .+++|++++....+++++.++|||| .+++.+++...
T Consensus 136 ~~~~~d~~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 195 (299)
T 3g2m_A 136 TLVQGDMSAFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEA 195 (299)
T ss_dssp EEEECBTTBCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHH
T ss_pred EEEeCchhcCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCcc
Confidence 999999999887 6899999975 7788888666778888999999998 99999998754
No 40
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.55 E-value=5.3e-14 Score=137.91 Aligned_cols=160 Identities=19% Similarity=0.230 Sum_probs=114.5
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
.+.+.+. .++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|+++. .++.++
T Consensus 24 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~~~~~~~~~~~~~-------------------~~~~~~ 80 (230)
T 3cc8_A 24 NLLKHIK-KEWKEVLDIGCSSGALGAAIKENG---TRVSGIEAFPEAAEQAKEKL-------------------DHVVLG 80 (230)
T ss_dssp HHHTTCC-TTCSEEEEETCTTSHHHHHHHTTT---CEEEEEESSHHHHHHHHTTS-------------------SEEEES
T ss_pred HHHHHhc-cCCCcEEEeCCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhC-------------------CcEEEc
Confidence 3445444 567899999999999999999884 89999999999999987622 267889
Q ss_pred Cccc--cCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhhhhc
Q 004178 602 SITV--FDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQ 678 (770)
Q Consensus 602 Daed--lp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~~~~ 678 (770)
|+.+ .+..++.||+|++..+++|++ +. ..+++++.++|+|| .+++++|+......+.... .+... + .
T Consensus 81 d~~~~~~~~~~~~fD~v~~~~~l~~~~-~~-~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~-~~~~~----~---~ 150 (230)
T 3cc8_A 81 DIETMDMPYEEEQFDCVIFGDVLEHLF-DP-WAVIEKVKPYIKQNGVILASIPNVSHISVLAPLL-AGNWT----Y---T 150 (230)
T ss_dssp CTTTCCCCSCTTCEEEEEEESCGGGSS-CH-HHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHH-TTCCC----C---B
T ss_pred chhhcCCCCCCCccCEEEECChhhhcC-CH-HHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHh-cCCce----e---c
Confidence 9876 455668999999999999998 33 35666799999998 8889999976544332221 01100 0 0
Q ss_pred cccccCCCcccccCHHHHHHHHHHHHHHCCcEEE-EEeeeC
Q 004178 679 SCKFRNHDHKFEWTRDQFNCWATELAARHNYSVE-FSGVGG 718 (770)
Q Consensus 679 ~~~fRh~DHkfewTreEF~~Wa~~La~r~GY~VE-F~GvG~ 718 (770)
........|...++.+++.+ +..++||.+. ...+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~----~l~~~Gf~~~~~~~~~~ 187 (230)
T 3cc8_A 151 EYGLLDKTHIRFFTFNEMLR----MFLKAGYSISKVDRVYV 187 (230)
T ss_dssp SSSTTBTTCCCCCCHHHHHH----HHHHTTEEEEEEEEEEC
T ss_pred cCCCCCcceEEEecHHHHHH----HHHHcCCeEEEEEeccc
Confidence 01122345667789999985 5578899874 444444
No 41
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.55 E-value=5.4e-14 Score=136.85 Aligned_cols=135 Identities=13% Similarity=0.113 Sum_probs=105.5
Q ss_pred EEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCCCCCc
Q 004178 534 TLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSRLHGF 613 (770)
Q Consensus 534 rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~d~sF 613 (770)
+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++... + .++++.++|+.++++.++.|
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~------------~-~~~~~~~~d~~~~~~~~~~f 95 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLG---YEVTAVDQSSVGLAKAKQLAQEK------------G-VKITTVQSNLADFDIVADAW 95 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTT---CEEEEECSSHHHHHHHHHHHHHH------------T-CCEEEECCBTTTBSCCTTTC
T ss_pred CEEEECCCCCHhHHHHHhCC---CeEEEEECCHHHHHHHHHHHHhc------------C-CceEEEEcChhhcCCCcCCc
Confidence 99999999999999999886 79999999999999999876421 1 27999999999988777899
Q ss_pred cEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhhhhccccccCCCcccccC
Q 004178 614 DIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQSCKFRNHDHKFEWT 692 (770)
Q Consensus 614 DlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~~~~~~~fRh~DHkfewT 692 (770)
|+|++. +.|+..+....+++++.++|||| .+++.+++...... . ......+.+.++
T Consensus 96 D~v~~~--~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~-~--------------------~~~~~~~~~~~~ 152 (202)
T 2kw5_A 96 EGIVSI--FCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQY-N--------------------TGGPKDLDLLPK 152 (202)
T ss_dssp SEEEEE--CCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGG-T--------------------SCCSSSGGGCCC
T ss_pred cEEEEE--hhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccC-C--------------------CCCCCcceeecC
Confidence 999995 45676566777778899999999 88888887542211 0 011224556789
Q ss_pred HHHHHHHHHHHHHHCCcEEEE
Q 004178 693 RDQFNCWATELAARHNYSVEF 713 (770)
Q Consensus 693 reEF~~Wa~~La~r~GY~VEF 713 (770)
++++.+++. ||.+..
T Consensus 153 ~~~l~~~l~------Gf~v~~ 167 (202)
T 2kw5_A 153 LETLQSELP------SLNWLI 167 (202)
T ss_dssp HHHHHHHCS------SSCEEE
T ss_pred HHHHHHHhc------CceEEE
Confidence 999997663 888754
No 42
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.55 E-value=8.2e-15 Score=152.00 Aligned_cols=110 Identities=15% Similarity=0.209 Sum_probs=90.0
Q ss_pred HHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccE
Q 004178 517 KQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSA 596 (770)
Q Consensus 517 ~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~V 596 (770)
.+-++++.+... ...+|||||||+|.++..|++.+ .+|+|+|+|+.|++.|++ .+++
T Consensus 27 ~~l~~~l~~~~~--~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~------------------~~~v 83 (257)
T 4hg2_A 27 RALFRWLGEVAP--ARGDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALR------------------HPRV 83 (257)
T ss_dssp HHHHHHHHHHSS--CSSEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCC------------------CTTE
T ss_pred HHHHHHHHHhcC--CCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhh------------------cCCc
Confidence 444556666543 35799999999999999999987 799999999999987743 2479
Q ss_pred EEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 597 VLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 597 ef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
++.++|++++++++++||+|+|..++||++.+ .+.+++.|+|||| .+++.+.+
T Consensus 84 ~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~~---~~~~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 84 TYAVAPAEDTGLPPASVDVAIAAQAMHWFDLD---RFWAELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp EEEECCTTCCCCCSSCEEEEEECSCCTTCCHH---HHHHHHHHHEEEEEEEEEEEEC
T ss_pred eeehhhhhhhcccCCcccEEEEeeehhHhhHH---HHHHHHHHHcCCCCEEEEEECC
Confidence 99999999999999999999999999998732 4556799999998 66555443
No 43
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.54 E-value=4.7e-14 Score=138.20 Aligned_cols=132 Identities=18% Similarity=0.194 Sum_probs=100.4
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCCC
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSRL 610 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~d 610 (770)
++.+|||+|||+|.++..+ + ..+|+|+|+++.+++.|++++ .++++.++|+.++++.+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~--~~~v~~vD~s~~~~~~a~~~~-----------------~~~~~~~~d~~~~~~~~ 93 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---P--YPQKVGVEPSEAMLAVGRRRA-----------------PEATWVRAWGEALPFPG 93 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---C--CSEEEEECCCHHHHHHHHHHC-----------------TTSEEECCCTTSCCSCS
T ss_pred CCCeEEEECCCCCHhHHhC---C--CCeEEEEeCCHHHHHHHHHhC-----------------CCcEEEEcccccCCCCC
Confidence 6789999999999999877 3 138999999999999998743 36889999999988888
Q ss_pred CCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchh--HHHhhhccccCCCCCchhhhhccccccCCCc
Q 004178 611 HGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYN--AILQKSSSTIQEDDPDEKTQLQSCKFRNHDH 687 (770)
Q Consensus 611 ~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN--~lf~~~~~~g~~e~pde~~~~~~~~fRh~DH 687 (770)
++||+|++..+++|++ +. ..+++++.++|||| .+++++|+.... ..+.... ........|
T Consensus 94 ~~fD~v~~~~~l~~~~-~~-~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~---------------~~~~~~~~~ 156 (211)
T 2gs9_A 94 ESFDVVLLFTTLEFVE-DV-ERVLLEARRVLRPGGALVVGVLEALSPWAALYRRLG---------------EKGVLPWAQ 156 (211)
T ss_dssp SCEEEEEEESCTTTCS-CH-HHHHHHHHHHEEEEEEEEEEEECTTSHHHHHHHHHH---------------HTTCTTGGG
T ss_pred CcEEEEEEcChhhhcC-CH-HHHHHHHHHHcCCCCEEEEEecCCcCcHHHHHHHHh---------------hccCccccc
Confidence 8999999999999998 43 35566799999998 888888886421 1111100 001111235
Q ss_pred ccccCHHHHHHHHH
Q 004178 688 KFEWTRDQFNCWAT 701 (770)
Q Consensus 688 kfewTreEF~~Wa~ 701 (770)
...++++++++|+.
T Consensus 157 ~~~~s~~~l~~~l~ 170 (211)
T 2gs9_A 157 ARFLAREDLKALLG 170 (211)
T ss_dssp CCCCCHHHHHHHHC
T ss_pred cccCCHHHHHHHhc
Confidence 56689999998775
No 44
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.54 E-value=1.2e-14 Score=149.58 Aligned_cols=126 Identities=23% Similarity=0.342 Sum_probs=102.8
Q ss_pred HHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEE
Q 004178 519 RVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVL 598 (770)
Q Consensus 519 R~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef 598 (770)
-.+++.+.+...++.+|||||||+|.++..|++.+ .+|+|+|+|+.|++.|++++..... .....++.+
T Consensus 45 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~--------~~~~~~~~~ 113 (293)
T 3thr_A 45 YKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEG---FSVTSVDASDKMLKYALKERWNRRK--------EPAFDKWVI 113 (293)
T ss_dssp HHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTT--------SHHHHTCEE
T ss_pred HHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHhhhhccc--------ccccceeeE
Confidence 33566677776778999999999999999999986 6999999999999999886532110 112347899
Q ss_pred EECCccccC---CCCCCccEEEec-cccccCCh-----hHHHHHHHHHHHcccCC-EEEEEecCCch
Q 004178 599 FDGSITVFD---SRLHGFDIGTCL-EVIEHMEE-----DEASQFGNIVLSSFRPR-ILIVSTPNYEY 655 (770)
Q Consensus 599 ~~GDaedlp---~~d~sFDlVVc~-eVLEHL~~-----d~~~~fleeI~rvLKPG-~LIISTPN~ef 655 (770)
..+|+.+++ +.+++||+|+|. .+++|+++ +....+++++.++|||| .+++++||.+.
T Consensus 114 ~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (293)
T 3thr_A 114 EEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDY 180 (293)
T ss_dssp EECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECHHH
T ss_pred eecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCHHH
Confidence 999998887 677899999998 89999996 55677788899999998 88999998553
No 45
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.54 E-value=5.5e-14 Score=144.41 Aligned_cols=110 Identities=12% Similarity=0.177 Sum_probs=92.0
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
.+++.+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.|++++ +++++.++
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~-----------------~~~~~~~~ 107 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQSG---AEVLGTDNAATMIEKARQNY-----------------PHLHFDVA 107 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHC-----------------TTSCEEEC
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHhhC-----------------CCCEEEEC
Confidence 34455566678899999999999999999854 79999999999999998743 36889999
Q ss_pred CccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCc
Q 004178 602 SITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 602 Daedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~e 654 (770)
|+.++++ +++||+|++..+++|++ +. ..+++++.++|||| .+++.+++..
T Consensus 108 d~~~~~~-~~~fD~v~~~~~l~~~~-d~-~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 108 DARNFRV-DKPLDAVFSNAMLHWVK-EP-EAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp CTTTCCC-SSCEEEEEEESCGGGCS-CH-HHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred ChhhCCc-CCCcCEEEEcchhhhCc-CH-HHHHHHHHHhcCCCcEEEEEecCCc
Confidence 9999886 57999999999999998 33 35556799999998 8888888754
No 46
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.54 E-value=1.9e-14 Score=136.38 Aligned_cols=135 Identities=19% Similarity=0.274 Sum_probs=104.0
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
.+++.+...++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|+++. +++++..+
T Consensus 8 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~-----------------~~v~~~~~ 67 (170)
T 3i9f_A 8 EYLPNIFEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEKF-----------------DSVITLSD 67 (170)
T ss_dssp TTHHHHHSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHHC-----------------TTSEEESS
T ss_pred HHHHhcCcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHhC-----------------CCcEEEeC
Confidence 34455566678899999999999999999987 59999999999999998742 37899999
Q ss_pred CccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhhhhccc
Q 004178 602 SITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQSC 680 (770)
Q Consensus 602 Daedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~~~~~~ 680 (770)
| .+..++.||+|++..+++|++ +. ..+++++.++|||| .+++.+++....
T Consensus 68 d---~~~~~~~~D~v~~~~~l~~~~-~~-~~~l~~~~~~L~pgG~l~~~~~~~~~~------------------------ 118 (170)
T 3i9f_A 68 P---KEIPDNSVDFILFANSFHDMD-DK-QHVISEVKRILKDDGRVIIIDWRKENT------------------------ 118 (170)
T ss_dssp G---GGSCTTCEEEEEEESCSTTCS-CH-HHHHHHHHHHEEEEEEEEEEEECSSCC------------------------
T ss_pred C---CCCCCCceEEEEEccchhccc-CH-HHHHHHHHHhcCCCCEEEEEEcCcccc------------------------
Confidence 9 556678999999999999997 33 45666799999998 777776553211
Q ss_pred cccCCCcccccCHHHHHHHHHHHHHHCCcEEE
Q 004178 681 KFRNHDHKFEWTRDQFNCWATELAARHNYSVE 712 (770)
Q Consensus 681 ~fRh~DHkfewTreEF~~Wa~~La~r~GY~VE 712 (770)
...+.+...++++++++|+. ||.+.
T Consensus 119 -~~~~~~~~~~~~~~~~~~l~------Gf~~~ 143 (170)
T 3i9f_A 119 -GIGPPLSIRMDEKDYMGWFS------NFVVE 143 (170)
T ss_dssp -SSSSCGGGCCCHHHHHHHTT------TEEEE
T ss_pred -ccCchHhhhcCHHHHHHHHh------CcEEE
Confidence 01122334579999996663 88763
No 47
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.53 E-value=1.1e-13 Score=136.24 Aligned_cols=114 Identities=18% Similarity=0.221 Sum_probs=92.5
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCCC
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSRL 610 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~d 610 (770)
++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++..... ......++++..+|+..+++.+
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~-------~~~~~~~~~~~~~d~~~~~~~~ 99 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKG---YSVTGIDINSEAIRLAETAARSPGL-------NQKTGGKAEFKVENASSLSFHD 99 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTTCCSC-------CSSSSCEEEEEECCTTSCCSCT
T ss_pred CCCeEEEECCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHHHhcCC-------ccccCcceEEEEecccccCCCC
Confidence 57899999999999999999986 7999999999999999987632100 0011237899999999998888
Q ss_pred CCccEEEeccccccCCh-hHHHHHHHHHHHcccCC-EEEEEecCCc
Q 004178 611 HGFDIGTCLEVIEHMEE-DEASQFGNIVLSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 611 ~sFDlVVc~eVLEHL~~-d~~~~fleeI~rvLKPG-~LIISTPN~e 654 (770)
+.||+|++..+++|+++ +....+++++.++|||| .+++.+++..
T Consensus 100 ~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 100 SSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQN 145 (235)
T ss_dssp TCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred CceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcc
Confidence 99999999999999973 33446777899999998 7777777654
No 48
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.53 E-value=7.8e-14 Score=141.61 Aligned_cols=113 Identities=23% Similarity=0.340 Sum_probs=91.1
Q ss_pred HHHHHHHHHHhhc--CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCc
Q 004178 517 KQRVEYALQHIKE--SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVK 594 (770)
Q Consensus 517 ~qR~e~Il~~L~~--~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~ 594 (770)
....+.+.+.+.. .++.+|||+|||+|.++..|++.+ .+|+|+|+|+.+++.|++++ .
T Consensus 34 ~~~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~-----------------~ 93 (263)
T 3pfg_A 34 HREAADLAALVRRHSPKAASLLDVACGTGMHLRHLADSF---GTVEGLELSADMLAIARRRN-----------------P 93 (263)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTS---SEEEEEESCHHHHHHHHHHC-----------------T
T ss_pred HHHHHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhC-----------------C
Confidence 3344444444432 346899999999999999999987 68999999999999998753 2
Q ss_pred cEEEEECCccccCCCCCCccEEEecc-ccccCCh-hHHHHHHHHHHHcccCC-EEEEEe
Q 004178 595 SAVLFDGSITVFDSRLHGFDIGTCLE-VIEHMEE-DEASQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 595 ~Vef~~GDaedlp~~d~sFDlVVc~e-VLEHL~~-d~~~~fleeI~rvLKPG-~LIIST 650 (770)
++++.++|+.+++. ++.||+|+|.. +++|++. +....+++++.++|||| .+++.+
T Consensus 94 ~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 94 DAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp TSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 68999999999887 68999999998 9999963 45566777899999999 666653
No 49
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.53 E-value=3.2e-14 Score=143.09 Aligned_cols=156 Identities=15% Similarity=0.178 Sum_probs=111.3
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
.+++.+...++.+|||+|||+|.++..+++.. +..+|+|+|+|+.|++.|+++. +++++.++
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~-----------------~~~~~~~~ 85 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADRL-----------------PNTNFGKA 85 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHHS-----------------TTSEEEEC
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhC-----------------CCcEEEEC
Confidence 45566666678899999999999999999874 3379999999999999998742 36899999
Q ss_pred CccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhH---HHhhhccccCCCCCchhhhh
Q 004178 602 SITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNA---ILQKSSSTIQEDDPDEKTQL 677 (770)
Q Consensus 602 Daedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~---lf~~~~~~g~~e~pde~~~~ 677 (770)
|+.+++ .+++||+|++..+++|++ +. ..+++++.++|||| .+++.+|+..... .+...... .
T Consensus 86 d~~~~~-~~~~fD~v~~~~~l~~~~-~~-~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~-----------~ 151 (259)
T 2p35_A 86 DLATWK-PAQKADLLYANAVFQWVP-DH-LAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADG-----------G 151 (259)
T ss_dssp CTTTCC-CSSCEEEEEEESCGGGST-TH-HHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHH-----------S
T ss_pred ChhhcC-ccCCcCEEEEeCchhhCC-CH-HHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcC-----------c
Confidence 999888 678999999999999997 33 45566799999998 8888888653221 12111000 0
Q ss_pred cccc-ccC--CCcccccCHHHHHHHHHHHHHHCCcEEEE
Q 004178 678 QSCK-FRN--HDHKFEWTRDQFNCWATELAARHNYSVEF 713 (770)
Q Consensus 678 ~~~~-fRh--~DHkfewTreEF~~Wa~~La~r~GY~VEF 713 (770)
.|.. +.. +.+...++.+++.++ ..++||.++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~----l~~aGf~v~~ 186 (259)
T 2p35_A 152 PWKDAFSGGGLRRKPLPPPSDYFNA----LSPKSSRVDV 186 (259)
T ss_dssp TTGGGC-------CCCCCHHHHHHH----HGGGEEEEEE
T ss_pred chHHHhccccccccCCCCHHHHHHH----HHhcCCceEE
Confidence 0111 111 224456788888854 4678997654
No 50
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.53 E-value=3.6e-13 Score=128.42 Aligned_cols=103 Identities=17% Similarity=0.232 Sum_probs=89.2
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
.++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++ .++++.++|+.+++.+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~-----------------~~~~~~~~d~~~~~~~ 104 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQG---HDVLGTDLDPILIDYAKQDF-----------------PEARWVVGDLSVDQIS 104 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHC-----------------TTSEEEECCTTTSCCC
T ss_pred cCCCeEEEECCCCCHHHHHHHHCC---CcEEEEcCCHHHHHHHHHhC-----------------CCCcEEEcccccCCCC
Confidence 367899999999999999999886 79999999999999998754 2589999999988777
Q ss_pred CCCccEEEec-cccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 610 LHGFDIGTCL-EVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 610 d~sFDlVVc~-eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
++.||+|++. .+++|+..+....+++.+.++|+|| .+++.+++
T Consensus 105 ~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~ 149 (195)
T 3cgg_A 105 ETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGA 149 (195)
T ss_dssp CCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred CCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 7899999998 7999998666778888899999998 77776554
No 51
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.53 E-value=8.2e-14 Score=143.41 Aligned_cols=110 Identities=11% Similarity=0.089 Sum_probs=93.2
Q ss_pred HHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcc
Q 004178 525 QHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSIT 604 (770)
Q Consensus 525 ~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDae 604 (770)
+.+...++.+|||+|||+|.++..|++.+ .+|+|+|+|+.+++.|++++.. .+. ++++.++|+.
T Consensus 114 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~g---~~v~~vD~s~~~~~~a~~~~~~------------~~~-~~~~~~~d~~ 177 (286)
T 3m70_A 114 DAAKIISPCKVLDLGCGQGRNSLYLSLLG---YDVTSWDHNENSIAFLNETKEK------------ENL-NISTALYDIN 177 (286)
T ss_dssp HHHHHSCSCEEEEESCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH------------TTC-CEEEEECCGG
T ss_pred HHhhccCCCcEEEECCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHH------------cCC-ceEEEEeccc
Confidence 44444578999999999999999999986 7999999999999999987742 122 8999999999
Q ss_pred ccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEec
Q 004178 605 VFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 605 dlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
+.+. .+.||+|++..+++|++++....+++++.++|||| .+++.+.
T Consensus 178 ~~~~-~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 178 AANI-QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp GCCC-CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cccc-cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 8877 68999999999999998777778888999999998 5555443
No 52
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.52 E-value=6.1e-14 Score=139.13 Aligned_cols=103 Identities=19% Similarity=0.341 Sum_probs=86.7
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.|++++ +++++.++|+.+++.
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~-----------------~~~~~~~~d~~~~~~- 97 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL-----------------PDATLHQGDMRDFRL- 97 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC-----------------TTCEEEECCTTTCCC-
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC-----------------CCCEEEECCHHHccc-
Confidence 457899999999999999999886 58999999999999998743 368999999998876
Q ss_pred CCCccEEEec-cccccCCh-hHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 610 LHGFDIGTCL-EVIEHMEE-DEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 610 d~sFDlVVc~-eVLEHL~~-d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
.+.||+|+|. .+++|+.. +....+++++.++|||| .+++.+++.
T Consensus 98 ~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 98 GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 6789999965 59999963 45567777899999998 777776654
No 53
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.52 E-value=2.6e-13 Score=134.91 Aligned_cols=118 Identities=18% Similarity=0.250 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCcc
Q 004178 516 SKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKS 595 (770)
Q Consensus 516 ~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~ 595 (770)
+....+++.+.+.. +.+|||+|||+|.++..+++. .+|+|+|+|+.+++.|++++.. ...+
T Consensus 20 ~~~~~~~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~-------------~~~~ 80 (243)
T 3d2l_A 20 YPEWVAWVLEQVEP--GKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAME-------------TNRH 80 (243)
T ss_dssp HHHHHHHHHHHSCT--TCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHH-------------TTCC
T ss_pred HHHHHHHHHHHcCC--CCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhh-------------cCCc
Confidence 44455566665543 589999999999999999876 5899999999999999987642 1147
Q ss_pred EEEEECCccccCCCCCCccEEEecc-ccccCC-hhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 596 AVLFDGSITVFDSRLHGFDIGTCLE-VIEHME-EDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 596 Vef~~GDaedlp~~d~sFDlVVc~e-VLEHL~-~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
+++.++|+.+++.. +.||+|++.. +++|+. .+....+++++.++|||| .+++.+++.
T Consensus 81 ~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 140 (243)
T 3d2l_A 81 VDFWVQDMRELELP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSP 140 (243)
T ss_dssp CEEEECCGGGCCCS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred eEEEEcChhhcCCC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCH
Confidence 89999999988765 7899999986 999994 345567777899999998 888888774
No 54
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.51 E-value=1.5e-13 Score=134.48 Aligned_cols=156 Identities=17% Similarity=0.095 Sum_probs=108.3
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
.+.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|+++ .++.+..+
T Consensus 43 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~------------------~~~~~~~~ 101 (227)
T 3e8s_A 43 AILLAILGRQPERVLDLGCGEGWLLRALADRG---IEAVGVDGDRTLVDAARAA------------------GAGEVHLA 101 (227)
T ss_dssp HHHHHHHHTCCSEEEEETCTTCHHHHHHHTTT---CEEEEEESCHHHHHHHHHT------------------CSSCEEEC
T ss_pred HHHHHhhcCCCCEEEEeCCCCCHHHHHHHHCC---CEEEEEcCCHHHHHHHHHh------------------cccccchh
Confidence 45555666677999999999999999999986 7999999999999999873 25678888
Q ss_pred Ccccc---CCCC-CCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhhh
Q 004178 602 SITVF---DSRL-HGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQ 676 (770)
Q Consensus 602 Daedl---p~~d-~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~~ 676 (770)
|+.++ +... ..||+|+|..+++ .. +. ..+++++.++|||| .+++.+++......- . ....+..
T Consensus 102 ~~~~~~~~~~~~~~~fD~v~~~~~l~-~~-~~-~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~-~--------~~~~~~~ 169 (227)
T 3e8s_A 102 SYAQLAEAKVPVGKDYDLICANFALL-HQ-DI-IELLSAMRTLLVPGGALVIQTLHPWSVADG-D--------YQDGWRE 169 (227)
T ss_dssp CHHHHHTTCSCCCCCEEEEEEESCCC-SS-CC-HHHHHHHHHTEEEEEEEEEEECCTTTTCTT-C--------CSCEEEE
T ss_pred hHHhhcccccccCCCccEEEECchhh-hh-hH-HHHHHHHHHHhCCCeEEEEEecCccccCcc-c--------cccccch
Confidence 88776 4443 4599999999998 33 33 35566799999998 888888886432110 0 0000100
Q ss_pred hcccccc---CCCcccccCHHHHHHHHHHHHHHCCcEEEEE
Q 004178 677 LQSCKFR---NHDHKFEWTRDQFNCWATELAARHNYSVEFS 714 (770)
Q Consensus 677 ~~~~~fR---h~DHkfewTreEF~~Wa~~La~r~GY~VEF~ 714 (770)
..+..+. ...+...++.+++.+ +..++||.+.-.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~aGf~~~~~ 206 (227)
T 3e8s_A 170 ESFAGFAGDWQPMPWYFRTLASWLN----ALDMAGLRLVSL 206 (227)
T ss_dssp ECCTTSSSCCCCEEEEECCHHHHHH----HHHHTTEEEEEE
T ss_pred hhhhccccCcccceEEEecHHHHHH----HHHHcCCeEEEE
Confidence 0111111 122344579999884 557899988643
No 55
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.51 E-value=2e-13 Score=139.77 Aligned_cols=112 Identities=16% Similarity=0.181 Sum_probs=92.9
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC-
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS- 608 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~- 608 (770)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|++++... ....++++.++|+.+.+.
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~-----------~~~~~v~~~~~d~~~~~~~ 129 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG--IGEYYGVDIAEVSINDARVRARNM-----------KRRFKVFFRAQDSYGRHMD 129 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT--CSEEEEEESCHHHHHHHHHHHHTS-----------CCSSEEEEEESCTTTSCCC
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHhc-----------CCCccEEEEECCccccccC
Confidence 467899999999999999888765 259999999999999999877421 122479999999998877
Q ss_pred CCCCccEEEecccccc--CChhHHHHHHHHHHHcccCC-EEEEEecCCc
Q 004178 609 RLHGFDIGTCLEVIEH--MEEDEASQFGNIVLSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 609 ~d~sFDlVVc~eVLEH--L~~d~~~~fleeI~rvLKPG-~LIISTPN~e 654 (770)
.++.||+|+|..+++| ...+....+++++.++|||| .+++.+|+..
T Consensus 130 ~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 178 (298)
T 1ri5_A 130 LGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRD 178 (298)
T ss_dssp CSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHH
T ss_pred CCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 5789999999999988 44455667778899999998 8899999853
No 56
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.51 E-value=3e-13 Score=137.73 Aligned_cols=169 Identities=11% Similarity=0.028 Sum_probs=114.0
Q ss_pred HHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChH------HHHHHHHHHhhhhhcccccCCCCCC
Q 004178 519 RVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQK------SLSRAAKIIHSKLSKKLDAAVPCTD 592 (770)
Q Consensus 519 R~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISee------mLe~ArkrL~~~~s~~~~~l~pr~~ 592 (770)
.+..+++.+...++.+|||||||+|.++..+++..++..+|+|+|+|+. +++.|++++... ..
T Consensus 31 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~-----------~~ 99 (275)
T 3bkx_A 31 HRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAG-----------PL 99 (275)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTS-----------TT
T ss_pred HHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhc-----------CC
Confidence 3445566666778899999999999999999987435579999999997 999999877421 12
Q ss_pred CccEEEEECC---ccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchh------HHHhhh
Q 004178 593 VKSAVLFDGS---ITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYN------AILQKS 662 (770)
Q Consensus 593 ~~~Vef~~GD---aedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN------~lf~~~ 662 (770)
..++++.++| ...+++.++.||+|++..+++|+++.. .+.+.+.++++|| .+++.+...... ..+..+
T Consensus 100 ~~~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~--~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~ 177 (275)
T 3bkx_A 100 GDRLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASAN--ALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAM 177 (275)
T ss_dssp GGGEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHH--HHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHH
T ss_pred CCceEEEECChhhhccCCCCCCCEEEEEEccchhhCCCHH--HHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHH
Confidence 2579999998 455566678999999999999998443 3666666777767 777766553211 111100
Q ss_pred ccccCCCCCchhhhhccccccCCCcccccCHHHHHHHHHHHHHHCCcEEEE
Q 004178 663 SSTIQEDDPDEKTQLQSCKFRNHDHKFEWTRDQFNCWATELAARHNYSVEF 713 (770)
Q Consensus 663 ~~~g~~e~pde~~~~~~~~fRh~DHkfewTreEF~~Wa~~La~r~GY~VEF 713 (770)
. . ..+. .........+...++.+++.+|+ +++||.+.-
T Consensus 178 ~---~----~~~~--~~~~~~~~~~~~~~s~~~l~~~l----~~aGf~~~~ 215 (275)
T 3bkx_A 178 I---Q----GLLY--AIAPSDVANIRTLITPDTLAQIA----HDNTWTYTA 215 (275)
T ss_dssp H---H----HHHH--HHSCCTTCSCCCCCCHHHHHHHH----HHHTCEEEE
T ss_pred H---H----HHHh--hccccccccccccCCHHHHHHHH----HHCCCeeEE
Confidence 0 0 0000 00111123344568999999655 567998854
No 57
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.51 E-value=1.6e-13 Score=143.61 Aligned_cols=122 Identities=17% Similarity=0.284 Sum_probs=99.0
Q ss_pred HHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEE
Q 004178 518 QRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAV 597 (770)
Q Consensus 518 qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Ve 597 (770)
..++.+++.+...++.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.|++++... ....+++
T Consensus 77 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~-----------~~~~~v~ 143 (318)
T 2fk8_A 77 AKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFD--VNVIGLTLSKNQHARCEQVLASI-----------DTNRSRQ 143 (318)
T ss_dssp HHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTS-----------CCSSCEE
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhc-----------CCCCceE
Confidence 3445566666666788999999999999999998732 69999999999999999876421 1224699
Q ss_pred EEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCch
Q 004178 598 LFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEY 655 (770)
Q Consensus 598 f~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ef 655 (770)
+.++|+.+++ +.||+|++.++++|++.+....+++++.++|||| .+++.+++...
T Consensus 144 ~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 144 VLLQGWEDFA---EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp EEESCGGGCC---CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred EEECChHHCC---CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 9999998875 7899999999999997656667777899999998 88888887543
No 58
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.49 E-value=2.7e-13 Score=140.80 Aligned_cols=150 Identities=10% Similarity=0.135 Sum_probs=98.5
Q ss_pred CCCCEEEEEcCccchHHH----HHhcCCCCCce--EEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccE--EEEEC
Q 004178 530 SCATTLVDFGCGSGSLLD----SLLDYPTALEK--IVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSA--VLFDG 601 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~----~LAk~ggp~~~--VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~V--ef~~G 601 (770)
.++.+|||||||+|.++. .++... +..+ ++|+|+|++|++.|++++... .+..++ .+..+
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~-~~~~v~~~~vD~S~~ml~~a~~~~~~~-----------~~~~~v~~~~~~~ 118 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQY-PGVCINNEVVEPSAEQIAKYKELVAKT-----------SNLENVKFAWHKE 118 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHS-TTCEEEEEEECSCHHHHHHHHHHHHTC-----------SSCTTEEEEEECS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhC-CCceeeEEEEeCCHHHHHHHHHHHHhc-----------cCCCcceEEEEec
Confidence 346799999999997654 333322 2244 499999999999999876421 123344 45567
Q ss_pred CccccC------CCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCc--hhHHHhhhccccCCCCCc
Q 004178 602 SITVFD------SRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYE--YNAILQKSSSTIQEDDPD 672 (770)
Q Consensus 602 Daedlp------~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~e--fN~lf~~~~~~g~~e~pd 672 (770)
++++++ +.+++||+|+|..++||++ +.. .+++++.++|||| .+++..++.+ +..++...
T Consensus 119 ~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~-d~~-~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~---------- 186 (292)
T 2aot_A 119 TSSEYQSRMLEKKELQKWDFIHMIQMLYYVK-DIP-ATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKY---------- 186 (292)
T ss_dssp CHHHHHHHHHTTTCCCCEEEEEEESCGGGCS-CHH-HHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHH----------
T ss_pred chhhhhhhhccccCCCceeEEEEeeeeeecC-CHH-HHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHH----------
Confidence 776554 4568999999999999998 443 4455799999998 6666655532 22222221
Q ss_pred hhhhhccccccCCCcccccCHHHHHHHHHHHHHHCCcEEEE
Q 004178 673 EKTQLQSCKFRNHDHKFEWTRDQFNCWATELAARHNYSVEF 713 (770)
Q Consensus 673 e~~~~~~~~fRh~DHkfewTreEF~~Wa~~La~r~GY~VEF 713 (770)
+..++...|...++.+++..|+ .++||.+.-
T Consensus 187 ------~~~~~~~~~~~~~~~~~~~~~l----~~aGf~~~~ 217 (292)
T 2aot_A 187 ------GSRFPQDDLCQYITSDDLTQML----DNLGLKYEC 217 (292)
T ss_dssp ------GGGSCCCTTCCCCCHHHHHHHH----HHHTCCEEE
T ss_pred ------HHhccCCCcccCCCHHHHHHHH----HHCCCceEE
Confidence 1112223455567888888555 677887643
No 59
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.49 E-value=9.3e-14 Score=135.33 Aligned_cols=108 Identities=16% Similarity=0.213 Sum_probs=89.8
Q ss_pred CCCCEEEEEcCccchH-HHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC
Q 004178 530 SCATTLVDFGCGSGSL-LDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS 608 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~l-l~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~ 608 (770)
.++.+|||+|||+|.+ +..+++.+ .+|+|+|+|+.|++.|++++... ..++++.++|+.+++.
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~---~~v~~vD~s~~~~~~a~~~~~~~-------------~~~~~~~~~d~~~~~~ 85 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDG---YKTYGIEISDLQLKKAENFSREN-------------NFKLNISKGDIRKLPF 85 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTT---CEEEEEECCHHHHHHHHHHHHHH-------------TCCCCEEECCTTSCCS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhc-------------CCceEEEECchhhCCC
Confidence 4578999999999998 45555554 79999999999999999876421 1468999999999888
Q ss_pred CCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 609 RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 609 ~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
+++.||+|++..+++|++.+....+++++.++|||| .+++.+++.
T Consensus 86 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 86 KDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp CTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred CCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 778999999999999997666777788899999998 777777764
No 60
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.48 E-value=7.5e-14 Score=140.08 Aligned_cols=159 Identities=14% Similarity=0.130 Sum_probs=112.9
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
.++.+|||+|||+|.++..|++.+ .+|+|+|+|+.|++.|++++ ...++++.++|+.+++..
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~---~~v~gvD~s~~~~~~a~~~~---------------~~~~~~~~~~d~~~~~~~ 116 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFF---PRVIGLDVSKSALEIAAKEN---------------TAANISYRLLDGLVPEQA 116 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHS---SCEEEEESCHHHHHHHHHHS---------------CCTTEEEEECCTTCHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhC---CCEEEEECCHHHHHHHHHhC---------------cccCceEEECcccccccc
Confidence 456899999999999999999987 48999999999999998854 123799999999886543
Q ss_pred C-----CCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhhhhcccccc
Q 004178 610 L-----HGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQSCKFR 683 (770)
Q Consensus 610 d-----~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~~~~~~~fR 683 (770)
. ..||+|++..+++|++++....+++++.++|||| .+++..+.......+........ ..|. .. ...++
T Consensus 117 ~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~-~~~~-~~---~~~~~ 191 (245)
T 3ggd_A 117 AQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYG-QLPY-EL---LLVME 191 (245)
T ss_dssp HHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHS-SCCH-HH---HHHHT
T ss_pred cccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCC-CCch-hh---hhccc
Confidence 1 2499999999999999777778888999999998 77777777654444332210000 0010 00 01122
Q ss_pred CCCcccccCHHHHHHHHHHHHHHCCcEEEEEeee
Q 004178 684 NHDHKFEWTRDQFNCWATELAARHNYSVEFSGVG 717 (770)
Q Consensus 684 h~DHkfewTreEF~~Wa~~La~r~GY~VEF~GvG 717 (770)
+......++++++.+++ .||.+.-.+..
T Consensus 192 ~~~~~~~~~~~~~~~~~------aGf~~~~~~~~ 219 (245)
T 3ggd_A 192 HGIRPGIFTAEDIELYF------PDFEILSQGEG 219 (245)
T ss_dssp TTCCCCCCCHHHHHHHC------TTEEEEEEECC
T ss_pred cCCCCCccCHHHHHHHh------CCCEEEecccc
Confidence 22223347899988654 69888655443
No 61
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.48 E-value=4.6e-13 Score=139.96 Aligned_cols=113 Identities=18% Similarity=0.184 Sum_probs=91.0
Q ss_pred cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC
Q 004178 529 ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS 608 (770)
Q Consensus 529 ~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~ 608 (770)
..++.+|||||||+|.++..++....+..+|+|+|+++.+++.|++++... ....++++.++|+.++++
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----------~~~~~v~~~~~d~~~~~~ 184 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGH-----------ALAGQITLHRQDAWKLDT 184 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTS-----------TTGGGEEEEECCGGGCCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhc-----------CCCCceEEEECchhcCCc
Confidence 356789999999999999998633324589999999999999999877421 123459999999999887
Q ss_pred CCCCccEEEeccccccCChhH-HHHHHHHHHHcccCC-EEEEEecCC
Q 004178 609 RLHGFDIGTCLEVIEHMEEDE-ASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 609 ~d~sFDlVVc~eVLEHL~~d~-~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
. +.||+|++..+++|+++.. ...+++++.++|||| .+++.+...
T Consensus 185 ~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 185 R-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp C-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred c-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 7 8999999999999997433 334677899999999 777777553
No 62
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.48 E-value=2.4e-13 Score=140.73 Aligned_cols=117 Identities=21% Similarity=0.371 Sum_probs=96.0
Q ss_pred HHHHHHHh-hcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEE
Q 004178 520 VEYALQHI-KESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVL 598 (770)
Q Consensus 520 ~e~Il~~L-~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef 598 (770)
..++.+.+ ...++.+|||+|||+|.++..+++..+...+|+|+|+|+.+++.|++++.. ...++++
T Consensus 10 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~-------------~~~~v~~ 76 (284)
T 3gu3_A 10 VSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRL-------------LPYDSEF 76 (284)
T ss_dssp HHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHS-------------SSSEEEE
T ss_pred HHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHh-------------cCCceEE
Confidence 34555544 445789999999999999999998863347999999999999999987641 2238999
Q ss_pred EECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 599 FDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 599 ~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
.++|+.++++. ++||+|++..+++|++ +. ..+++++.++|||| .+++..|+
T Consensus 77 ~~~d~~~~~~~-~~fD~v~~~~~l~~~~-~~-~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 77 LEGDATEIELN-DKYDIAICHAFLLHMT-TP-ETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EESCTTTCCCS-SCEEEEEEESCGGGCS-SH-HHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEcchhhcCcC-CCeeEEEECChhhcCC-CH-HHHHHHHHHHcCCCCEEEEEecc
Confidence 99999998874 6999999999999998 33 35666799999999 88888888
No 63
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.46 E-value=1.7e-13 Score=139.86 Aligned_cols=111 Identities=19% Similarity=0.241 Sum_probs=93.8
Q ss_pred hcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 528 KESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 528 ~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
...++.+|||||||+|.++..+++.. +..+|+|+|+++.+++.|++++.. .+..++++..+|+.+++
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~------------~~~~~~~~~~~d~~~~~ 100 (276)
T 3mgg_A 34 VYPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEK------------NGIKNVKFLQANIFSLP 100 (276)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHH------------TTCCSEEEEECCGGGCC
T ss_pred cCCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHH------------cCCCCcEEEEcccccCC
Confidence 34568899999999999999999875 458999999999999999987742 23457999999999998
Q ss_pred CCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 608 SRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 608 ~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
+.+++||+|++..+++|+++ .. .+++++.++|||| .+++..++.
T Consensus 101 ~~~~~fD~v~~~~~l~~~~~-~~-~~l~~~~~~L~pgG~l~~~~~~~ 145 (276)
T 3mgg_A 101 FEDSSFDHIFVCFVLEHLQS-PE-EALKSLKKVLKPGGTITVIEGDH 145 (276)
T ss_dssp SCTTCEEEEEEESCGGGCSC-HH-HHHHHHHHHEEEEEEEEEEEECG
T ss_pred CCCCCeeEEEEechhhhcCC-HH-HHHHHHHHHcCCCcEEEEEEcCC
Confidence 88899999999999999983 33 5666899999998 777777653
No 64
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.46 E-value=1e-12 Score=130.37 Aligned_cols=147 Identities=14% Similarity=0.115 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCc
Q 004178 515 LSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVK 594 (770)
Q Consensus 515 L~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~ 594 (770)
.+...++.+.... ++.+|||+|||+|.++..+++. +|+|+++.+++.|+++
T Consensus 34 ~~~~~~~~l~~~~---~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~------------------- 84 (219)
T 1vlm_A 34 AYLSELQAVKCLL---PEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR------------------- 84 (219)
T ss_dssp HHHHHHHHHHHHC---CSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT-------------------
T ss_pred hHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc-------------------
Confidence 3444444444433 2789999999999999988653 9999999999999761
Q ss_pred cEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchh--HHHhhhccccCCCCC
Q 004178 595 SAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYN--AILQKSSSTIQEDDP 671 (770)
Q Consensus 595 ~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN--~lf~~~~~~g~~e~p 671 (770)
++++.++|+.+++..++.||+|++..+++|++ +. ..+++++.++|+|| .+++.+++.... ..+...
T Consensus 85 ~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~-~~-~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~--------- 153 (219)
T 1vlm_A 85 GVFVLKGTAENLPLKDESFDFALMVTTICFVD-DP-ERALKEAYRILKKGGYLIVGIVDRESFLGREYEKN--------- 153 (219)
T ss_dssp TCEEEECBTTBCCSCTTCEEEEEEESCGGGSS-CH-HHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHT---------
T ss_pred CCEEEEcccccCCCCCCCeeEEEEcchHhhcc-CH-HHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHH---------
Confidence 57899999998888778999999999999997 33 35566799999998 888888875422 111110
Q ss_pred chhhhhccccccCCCcccccCHHHHHHHHHHHHHHCCcEEE
Q 004178 672 DEKTQLQSCKFRNHDHKFEWTRDQFNCWATELAARHNYSVE 712 (770)
Q Consensus 672 de~~~~~~~~fRh~DHkfewTreEF~~Wa~~La~r~GY~VE 712 (770)
........|...++.+++.++ ..++||.+.
T Consensus 154 -------~~~~~~~~~~~~~~~~~l~~~----l~~~Gf~~~ 183 (219)
T 1vlm_A 154 -------KEKSVFYKNARFFSTEELMDL----MRKAGFEEF 183 (219)
T ss_dssp -------TTC-CCSTTCCCCCHHHHHHH----HHHTTCEEE
T ss_pred -------hcCcchhcccccCCHHHHHHH----HHHCCCeEE
Confidence 011112235566899999954 467899874
No 65
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.46 E-value=3.3e-13 Score=132.78 Aligned_cols=107 Identities=24% Similarity=0.321 Sum_probs=90.4
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCCC
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSRL 610 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~d 610 (770)
++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++.. ...++++.++|+.+++..+
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~-------------~~~~~~~~~~d~~~~~~~~ 101 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKS-------------RESNVEFIVGDARKLSFED 101 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH-------------TTCCCEEEECCTTSCCSCT
T ss_pred CCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHh-------------cCCCceEEECchhcCCCCC
Confidence 37899999999999999999987 4999999999999999987642 1157999999999888777
Q ss_pred CCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 611 HGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 611 ~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
++||+|++..++++...+....+++++.++|||| .+++.+|+.
T Consensus 102 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 102 KTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp TCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecCh
Confidence 8999999999966665455667777899999998 888888873
No 66
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.46 E-value=8.6e-14 Score=151.51 Aligned_cols=153 Identities=13% Similarity=0.168 Sum_probs=108.4
Q ss_pred HHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEE
Q 004178 520 VEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLF 599 (770)
Q Consensus 520 ~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~ 599 (770)
.+.+++.+...++.+|||||||+|.++..|++.+ .+|+|+|+|+.|++.|+++- . ......+.
T Consensus 96 ~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g---~~v~gvD~s~~~~~~a~~~~---~-----------~~~~~~~~ 158 (416)
T 4e2x_A 96 ARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAG---VRHLGFEPSSGVAAKAREKG---I-----------RVRTDFFE 158 (416)
T ss_dssp HHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTT---CEEEEECCCHHHHHHHHTTT---C-----------CEECSCCS
T ss_pred HHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcC---CcEEEECCCHHHHHHHHHcC---C-----------Ccceeeec
Confidence 3344455555578899999999999999999987 69999999999999997631 0 00011223
Q ss_pred ECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhhhhc
Q 004178 600 DGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQ 678 (770)
Q Consensus 600 ~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~~~~ 678 (770)
.+++..+++.+++||+|++.+++||++ +. ..+++++.++|||| .+++.+|+... ..... .
T Consensus 159 ~~~~~~l~~~~~~fD~I~~~~vl~h~~-d~-~~~l~~~~r~LkpgG~l~i~~~~~~~--~~~~~---------------~ 219 (416)
T 4e2x_A 159 KATADDVRRTEGPANVIYAANTLCHIP-YV-QSVLEGVDALLAPDGVFVFEDPYLGD--IVAKT---------------S 219 (416)
T ss_dssp HHHHHHHHHHHCCEEEEEEESCGGGCT-TH-HHHHHHHHHHEEEEEEEEEEEECHHH--HHHHT---------------C
T ss_pred hhhHhhcccCCCCEEEEEECChHHhcC-CH-HHHHHHHHHHcCCCeEEEEEeCChHH--hhhhc---------------c
Confidence 345555666678999999999999998 43 45566799999998 88889988432 21110 0
Q ss_pred cccccCCCcccccCHHHHHHHHHHHHHHCCcEEEE
Q 004178 679 SCKFRNHDHKFEWTRDQFNCWATELAARHNYSVEF 713 (770)
Q Consensus 679 ~~~fRh~DHkfewTreEF~~Wa~~La~r~GY~VEF 713 (770)
+..+ .+.|...++.+++. .+..++||.+.-
T Consensus 220 ~~~~-~~~~~~~~s~~~l~----~ll~~aGf~~~~ 249 (416)
T 4e2x_A 220 FDQI-FDEHFFLFSATSVQ----GMAQRCGFELVD 249 (416)
T ss_dssp GGGC-STTCCEECCHHHHH----HHHHHTTEEEEE
T ss_pred hhhh-hhhhhhcCCHHHHH----HHHHHcCCEEEE
Confidence 1111 14566778999988 556789998743
No 67
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.46 E-value=1.2e-13 Score=141.09 Aligned_cols=112 Identities=14% Similarity=0.112 Sum_probs=93.2
Q ss_pred HHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEE
Q 004178 518 QRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAV 597 (770)
Q Consensus 518 qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Ve 597 (770)
...+.+.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.|++ . .+++
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~-----------------~-~~~~ 79 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQG---LFVYAVEPSIVMRQQAVV-----------------H-PQVE 79 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTT---CEEEEECSCHHHHHSSCC-----------------C-TTEE
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCC---CEEEEEeCCHHHHHHHHh-----------------c-cCCE
Confidence 344566677776778999999999999999999855 899999999999987754 1 2899
Q ss_pred EEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 598 LFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 598 f~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
+.++|++++++++++||+|+|..+++|++ +. ..+++++.++|| | .+++.+++.
T Consensus 80 ~~~~d~~~~~~~~~~fD~v~~~~~l~~~~-~~-~~~l~~~~~~Lk-gG~~~~~~~~~ 133 (261)
T 3ege_A 80 WFTGYAENLALPDKSVDGVISILAIHHFS-HL-EKSFQEMQRIIR-DGTIVLLTFDI 133 (261)
T ss_dssp EECCCTTSCCSCTTCBSEEEEESCGGGCS-SH-HHHHHHHHHHBC-SSCEEEEEECG
T ss_pred EEECchhhCCCCCCCEeEEEEcchHhhcc-CH-HHHHHHHHHHhC-CcEEEEEEcCC
Confidence 99999999988889999999999999997 33 455667999999 8 677777663
No 68
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.46 E-value=1e-12 Score=132.27 Aligned_cols=121 Identities=12% Similarity=0.007 Sum_probs=85.7
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhccc-----ccCCCCCC------------
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKL-----DAAVPCTD------------ 592 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~-----~~l~pr~~------------ 592 (770)
.++.+|||+|||+|.++..+++.+. .+|+|+|+|+.|++.|++++........ .+.....+
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 4568999999999999998888761 4999999999999999887632100000 00000000
Q ss_pred CccE-EEEECCccccCC-CC---CCccEEEeccccccCChh--HHHHHHHHHHHcccCC-EEEEEecC
Q 004178 593 VKSA-VLFDGSITVFDS-RL---HGFDIGTCLEVIEHMEED--EASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 593 ~~~V-ef~~GDaedlp~-~d---~sFDlVVc~eVLEHL~~d--~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
..++ .+.++|+.+.+. .. +.||+|+|..+++|+.+. ....+++++.++|||| .+++.++.
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 0127 999999988654 44 789999999999965432 5566777899999998 77776643
No 69
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.46 E-value=3e-13 Score=140.48 Aligned_cols=116 Identities=20% Similarity=0.227 Sum_probs=90.9
Q ss_pred HHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEE
Q 004178 519 RVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVL 598 (770)
Q Consensus 519 R~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef 598 (770)
.++.+.+... .++.+|||||||+|.++..|++...+..+|+|+|+|+.+++.|++++... .....++++
T Consensus 25 ~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----------~~~~~~v~~ 93 (299)
T 3g5t_A 25 FYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGS----------PDTYKNVSF 93 (299)
T ss_dssp HHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHC----------C-CCTTEEE
T ss_pred HHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhc----------cCCCCceEE
Confidence 3445544433 46889999999999999999953213489999999999999999877431 012468999
Q ss_pred EECCccccCCCC------CCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEE
Q 004178 599 FDGSITVFDSRL------HGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIV 648 (770)
Q Consensus 599 ~~GDaedlp~~d------~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LII 648 (770)
.++|++++++.. ++||+|+|..++||+ +. ..+++++.++|||| .+++
T Consensus 94 ~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~--~~-~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 94 KISSSDDFKFLGADSVDKQKIDMITAVECAHWF--DF-EKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp EECCTTCCGGGCTTTTTSSCEEEEEEESCGGGS--CH-HHHHHHHHHHEEEEEEEEE
T ss_pred EEcCHHhCCccccccccCCCeeEEeHhhHHHHh--CH-HHHHHHHHHhcCCCcEEEE
Confidence 999999988766 799999999999999 33 45566799999998 6555
No 70
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.44 E-value=5.6e-13 Score=133.99 Aligned_cols=117 Identities=18% Similarity=0.354 Sum_probs=93.5
Q ss_pred HHHHHHHhh---cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccE
Q 004178 520 VEYALQHIK---ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSA 596 (770)
Q Consensus 520 ~e~Il~~L~---~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~V 596 (770)
.+++.+.+. ..++.+|||+|||+|.++..|++.+ .+|+|+|+|+.|++.|++++.. ...++
T Consensus 27 ~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~-------------~~~~v 90 (252)
T 1wzn_A 27 IDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERG---YEVVGLDLHEEMLRVARRKAKE-------------RNLKI 90 (252)
T ss_dssp HHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH-------------TTCCC
T ss_pred HHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHh-------------cCCce
Confidence 444444443 3456899999999999999999986 7999999999999999987642 11369
Q ss_pred EEEECCccccCCCCCCccEEEec-cccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 597 VLFDGSITVFDSRLHGFDIGTCL-EVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 597 ef~~GDaedlp~~d~sFDlVVc~-eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
++.++|+.+++.. +.||+|+|. .+++|+..+....+++++.++|||| .+++.+|+.
T Consensus 91 ~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~~ 148 (252)
T 1wzn_A 91 EFLQGDVLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPCW 148 (252)
T ss_dssp EEEESCGGGCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC-
T ss_pred EEEECChhhcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccch
Confidence 9999999988764 689999997 4667777666777888899999998 888888874
No 71
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.44 E-value=2.5e-13 Score=147.39 Aligned_cols=119 Identities=18% Similarity=0.176 Sum_probs=92.4
Q ss_pred cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc--
Q 004178 529 ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF-- 606 (770)
Q Consensus 529 ~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl-- 606 (770)
..++.+|||+|||+|.++..|++..++..+|+|+|+|+.+++.|++++........ ......+++|.++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~----g~~~~~~v~~~~~d~~~l~~ 156 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFF----GSPSRSNVRFLKGFIENLAT 156 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHH----SSTTCCCEEEEESCTTCGGG
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcc----cccCCCceEEEEccHHHhhh
Confidence 44678999999999999999988643457999999999999999987643210000 001225899999999987
Q ss_pred ----CCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 607 ----DSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 607 ----p~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
++++++||+|++..+++|++ +. ..+++++.++|||| .+++.+++.
T Consensus 157 ~~~~~~~~~~fD~V~~~~~l~~~~-d~-~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 157 AEPEGVPDSSVDIVISNCVCNLST-NK-LALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp CBSCCCCTTCEEEEEEESCGGGCS-CH-HHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred cccCCCCCCCEEEEEEccchhcCC-CH-HHHHHHHHHHcCCCCEEEEEEecc
Confidence 77788999999999999998 33 46666899999998 777766543
No 72
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.44 E-value=4.3e-13 Score=130.35 Aligned_cols=108 Identities=16% Similarity=0.117 Sum_probs=91.2
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
.++.+|||+|||+|.++..+++.+. .+|+|+|+++.+++.|++++. ...++++.++|+.++++.
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~--------------~~~~i~~~~~d~~~~~~~ 104 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF--PNVTSVDYSSVVVAAMQACYA--------------HVPQLRWETMDVRKLDFP 104 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC--CCEEEEESCHHHHHHHHHHTT--------------TCTTCEEEECCTTSCCSC
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC--CcEEEEeCCHHHHHHHHHhcc--------------cCCCcEEEEcchhcCCCC
Confidence 4578999999999999999998862 389999999999999988652 134799999999998877
Q ss_pred CCCccEEEeccccccCC-------------hhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 610 LHGFDIGTCLEVIEHME-------------EDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 610 d~sFDlVVc~eVLEHL~-------------~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
++.||+|++..+++|+. .+....+++++.++|||| .+++.+++.
T Consensus 105 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 105 SASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp SSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 78999999999998875 345567777899999998 888888875
No 73
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.43 E-value=8e-13 Score=138.05 Aligned_cols=121 Identities=17% Similarity=0.093 Sum_probs=91.2
Q ss_pred HHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEE
Q 004178 518 QRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAV 597 (770)
Q Consensus 518 qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Ve 597 (770)
.+.+.+++.+...++.+|||||||+|.++..|++.+ .+|+|+|+|+.|++.|++++.. ......
T Consensus 32 ~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g---~~V~gvD~S~~ml~~Ar~~~~~-------------~~v~~~ 95 (261)
T 3iv6_A 32 SDRENDIFLENIVPGSTVAVIGASTRFLIEKALERG---ASVTVFDFSQRMCDDLAEALAD-------------RCVTID 95 (261)
T ss_dssp CHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTSS-------------SCCEEE
T ss_pred HHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHh-------------ccceee
Confidence 455667777777788999999999999999999987 7999999999999999987621 111223
Q ss_pred EEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCch
Q 004178 598 LFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEY 655 (770)
Q Consensus 598 f~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ef 655 (770)
+...+........+.||+|++..+++|+..++...+++.+.++| || .++++.+...+
T Consensus 96 ~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g~~ 153 (261)
T 3iv6_A 96 LLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKLGFY 153 (261)
T ss_dssp ECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBSCC
T ss_pred eeecccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccCcc
Confidence 32222210111246899999999999998777777777899999 98 88888775443
No 74
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.43 E-value=1.1e-12 Score=125.04 Aligned_cols=118 Identities=11% Similarity=0.117 Sum_probs=95.1
Q ss_pred HHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCcc--EE
Q 004178 520 VEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKS--AV 597 (770)
Q Consensus 520 ~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~--Ve 597 (770)
.+.+++.+...++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++.. .+..+ ++
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~---~~v~~~D~~~~~~~~a~~~~~~------------~~~~~~~~~ 105 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYGVIGIALADEV---KSTTMADINRRAIKLAKENIKL------------NNLDNYDIR 105 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHH------------TTCTTSCEE
T ss_pred HHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHHH------------cCCCccceE
Confidence 3456666766678899999999999999999874 7999999999999999987742 12334 99
Q ss_pred EEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCc
Q 004178 598 LFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 598 f~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~e 654 (770)
+.++|+.+.. ..+.||+|++...++|.. +....+++++.++|+|| .+++.+++..
T Consensus 106 ~~~~d~~~~~-~~~~~D~v~~~~~~~~~~-~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 161 (194)
T 1dus_A 106 VVHSDLYENV-KDRKYNKIITNPPIRAGK-EVLHRIIEEGKELLKDNGEIWVVIQTKQ 161 (194)
T ss_dssp EEECSTTTTC-TTSCEEEEEECCCSTTCH-HHHHHHHHHHHHHEEEEEEEEEEEESTH
T ss_pred EEECchhccc-ccCCceEEEECCCcccch-hHHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 9999998743 357899999998887743 45556777899999998 8888888754
No 75
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.43 E-value=6.2e-13 Score=130.35 Aligned_cols=110 Identities=13% Similarity=0.119 Sum_probs=93.3
Q ss_pred HHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEE
Q 004178 520 VEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLF 599 (770)
Q Consensus 520 ~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~ 599 (770)
...+.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++.. .+..++++.
T Consensus 66 ~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~---~~v~~vD~~~~~~~~a~~~~~~------------~~~~~v~~~ 130 (210)
T 3lbf_A 66 VARMTELLELTPQSRVLEIGTGSGYQTAILAHLV---QHVCSVERIKGLQWQARRRLKN------------LDLHNVSTR 130 (210)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHHH------------TTCCSEEEE
T ss_pred HHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHH------------cCCCceEEE
Confidence 3455666777788999999999999999999885 8999999999999999998753 234579999
Q ss_pred ECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 600 DGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 600 ~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
.+|+.+.....+.||+|++..+++|+++ .+.++|||| .+++..++
T Consensus 131 ~~d~~~~~~~~~~~D~i~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 131 HGDGWQGWQARAPFDAIIVTAAPPEIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp ESCGGGCCGGGCCEEEEEESSBCSSCCT--------HHHHTEEEEEEEEEEECS
T ss_pred ECCcccCCccCCCccEEEEccchhhhhH--------HHHHhcccCcEEEEEEcC
Confidence 9999887666789999999999999982 478899998 88888877
No 76
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.42 E-value=4.2e-13 Score=142.03 Aligned_cols=117 Identities=12% Similarity=0.055 Sum_probs=84.9
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCc------c
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSI------T 604 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDa------e 604 (770)
++.+|||||||+|..+..++..+ ..+|+|+|+|+.||+.|+++........ .....+++|.++|+ .
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S~~~l~~A~~~~~~~~~~~------~~~~~~~~f~~~d~~~d~~~~ 119 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE--IALLVATDPDADAIARGNERYNKLNSGI------KTKYYKFDYIQETIRSDTFVS 119 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHCC----------CCCEEEEEECCTTSSSHHH
T ss_pred CCCeEEEEecCCcHhHHHHHhcC--CCeEEEEECCHHHHHHHHHHHHhccccc------cccccccchhhhhcccchhhh
Confidence 46899999999998766555543 2789999999999999998764321000 00011467888887 3
Q ss_pred cc--CCCCCCccEEEeccccccC-ChhHHHHHHHHHHHcccCC-EEEEEecCCch
Q 004178 605 VF--DSRLHGFDIGTCLEVIEHM-EEDEASQFGNIVLSSFRPR-ILIVSTPNYEY 655 (770)
Q Consensus 605 dl--p~~d~sFDlVVc~eVLEHL-~~d~~~~fleeI~rvLKPG-~LIISTPN~ef 655 (770)
++ ++.+++||+|+|..++||+ ..+....++++++++|||| .+++++||...
T Consensus 120 ~l~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~ 174 (302)
T 2vdw_A 120 SVREVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDK 174 (302)
T ss_dssp HHHTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred hhhccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHH
Confidence 33 2345799999999999986 2234467778899999999 88999998543
No 77
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.41 E-value=1.3e-12 Score=126.75 Aligned_cols=110 Identities=15% Similarity=0.104 Sum_probs=88.2
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC-
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS- 608 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~- 608 (770)
.++.+|||+|||+|.++..++..+ ..+|+|+|+++.|++.|++++... +..++++.++|+.++..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~------------~~~~v~~~~~d~~~~~~~ 108 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRG--AASVLFVESDQRSAAVIARNIEAL------------GLSGATLRRGAVAAVVAA 108 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEECCHHHHHHHHHHHHHH------------TCSCEEEEESCHHHHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCC--CCeEEEEECCHHHHHHHHHHHHHc------------CCCceEEEEccHHHHHhh
Confidence 467899999999999999887765 368999999999999999987532 23579999999987642
Q ss_pred -CCCCccEEEeccccccCChhHHHHHHHHHHH--cccCC-EEEEEecCCc
Q 004178 609 -RLHGFDIGTCLEVIEHMEEDEASQFGNIVLS--SFRPR-ILIVSTPNYE 654 (770)
Q Consensus 609 -~d~sFDlVVc~eVLEHL~~d~~~~fleeI~r--vLKPG-~LIISTPN~e 654 (770)
.++.||+|++...++|.. +....+++.+.+ +|+|| .+++.++...
T Consensus 109 ~~~~~fD~i~~~~p~~~~~-~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 109 GTTSPVDLVLADPPYNVDS-ADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp CCSSCCSEEEECCCTTSCH-HHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred ccCCCccEEEECCCCCcch-hhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 357899999998887764 345556667888 99998 8888877643
No 78
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.41 E-value=7.5e-13 Score=134.84 Aligned_cols=102 Identities=19% Similarity=0.175 Sum_probs=86.7
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCCC
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSRL 610 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~d 610 (770)
++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.|+++. . .+ +.++|+.++++.+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~-------------~---~~--~~~~d~~~~~~~~ 112 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERG---FEVVLVDPSKEMLEVAREKG-------------V---KN--VVEAKAEDLPFPS 112 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTT---CEEEEEESCHHHHHHHHHHT-------------C---SC--EEECCTTSCCSCT
T ss_pred CCCeEEEeCCCcCHHHHHHHHcC---CeEEEEeCCHHHHHHHHhhc-------------C---CC--EEECcHHHCCCCC
Confidence 67899999999999999999886 79999999999999998753 1 12 8899999988878
Q ss_pred CCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCc
Q 004178 611 HGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 611 ~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~e 654 (770)
+.||+|++..+++|+.++ ...+++++.++|||| .+++.+||..
T Consensus 113 ~~fD~v~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~ 156 (260)
T 2avn_A 113 GAFEAVLALGDVLSYVEN-KDKAFSEIRRVLVPDGLLIATVDNFY 156 (260)
T ss_dssp TCEEEEEECSSHHHHCSC-HHHHHHHHHHHEEEEEEEEEEEEBHH
T ss_pred CCEEEEEEcchhhhcccc-HHHHHHHHHHHcCCCeEEEEEeCChH
Confidence 899999999988887545 556667899999998 8888888853
No 79
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.41 E-value=2.4e-12 Score=121.97 Aligned_cols=112 Identities=17% Similarity=0.096 Sum_probs=87.6
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCc-cEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVK-SAVLF 599 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~-~Vef~ 599 (770)
..+++.+...++.+|||+|||+|.++..+++.. +..+|+|+|+++.+++.|++++.. .+.. ++ ++
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~------------~~~~~~~-~~ 80 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAIN------------LGVSDRI-AV 80 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHT------------TTCTTSE-EE
T ss_pred HHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHH------------hCCCCCE-EE
Confidence 455666676778899999999999999999885 448999999999999999987742 2233 78 88
Q ss_pred ECCccc-cCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 600 DGSITV-FDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 600 ~GDaed-lp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
++|+.+ ++...+.||+|++..+++| . .+++++.++|||| .+++.+++
T Consensus 81 ~~d~~~~~~~~~~~~D~i~~~~~~~~-~-----~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 81 QQGAPRAFDDVPDNPDVIFIGGGLTA-P-----GVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp ECCTTGGGGGCCSCCSEEEECC-TTC-T-----THHHHHHHTCCTTCEEEEEECS
T ss_pred ecchHhhhhccCCCCCEEEECCcccH-H-----HHHHHHHHhcCCCCEEEEEeec
Confidence 888754 3333378999999999988 2 4556799999998 77777765
No 80
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.41 E-value=2e-12 Score=135.69 Aligned_cols=119 Identities=15% Similarity=0.115 Sum_probs=95.6
Q ss_pred HHHHHHhhc--CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEE
Q 004178 521 EYALQHIKE--SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVL 598 (770)
Q Consensus 521 e~Il~~L~~--~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef 598 (770)
..+++.+.. .++.+|||+|||+|.++..+++.. +..+++|+|++ .+++.|++++... ....++++
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~-----------~~~~~v~~ 219 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQ-----------GVASRYHT 219 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHH-----------TCGGGEEE
T ss_pred HHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhc-----------CCCcceEE
Confidence 345555555 667899999999999999999875 44799999999 9999999876432 12246999
Q ss_pred EECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 599 FDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 599 ~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
..+|+.+.+.+ ..||+|++..++||++++....+++++.++|+|| .+++..+..
T Consensus 220 ~~~d~~~~~~~-~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 220 IAGSAFEVDYG-NDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp EESCTTTSCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred EecccccCCCC-CCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 99999876654 3499999999999998777778888999999998 677766653
No 81
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.40 E-value=2.5e-13 Score=155.17 Aligned_cols=110 Identities=21% Similarity=0.244 Sum_probs=85.0
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc--C
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF--D 607 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl--p 607 (770)
.++.+|||||||.|.++..|++.+ .+|+|||+++.+|+.|+.+..+ .+..+++|.+++++++ .
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~g---a~V~giD~~~~~i~~a~~~a~~------------~~~~~~~~~~~~~~~~~~~ 129 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKG---ATIVGIDFQQENINVCRALAEE------------NPDFAAEFRVGRIEEVIAA 129 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHT------------STTSEEEEEECCHHHHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHhCC---CEEEEECCCHHHHHHHHHHHHh------------cCCCceEEEECCHHHHhhh
Confidence 357899999999999999999998 8999999999999999876531 2335799999999987 3
Q ss_pred CCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC--EEEEEecCCc
Q 004178 608 SRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR--ILIVSTPNYE 654 (770)
Q Consensus 608 ~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG--~LIISTPN~e 654 (770)
..++.||+|+|++++||++++........+++.|+++ .+++.....+
T Consensus 130 ~~~~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~e 178 (569)
T 4azs_A 130 LEEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAVKE 178 (569)
T ss_dssp CCTTSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCTT
T ss_pred ccCCCccEEEECcchhcCCCHHHHHHHHHHHHHhccccceeeEEecccc
Confidence 4567899999999999998544222223466777775 4444444443
No 82
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.40 E-value=1e-12 Score=137.50 Aligned_cols=117 Identities=22% Similarity=0.247 Sum_probs=90.8
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC---
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD--- 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp--- 607 (770)
++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.|++++....... ......++++.++|+.+++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~ 106 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGR--INKLVCTDIADVSVKQCQQRYEDMKNRR-----DSEYIFSAEFITADSSKELLID 106 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHHSSS-----CC-CCCEEEEEECCTTTSCSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhcC--CCEEEEEeCCHHHHHHHHHHHHHhhhcc-----cccccceEEEEEecccccchhh
Confidence 67899999999999999998753 3799999999999999998764321000 0012347999999998875
Q ss_pred -CC--CCCccEEEeccccccC--ChhHHHHHHHHHHHcccCC-EEEEEecCCc
Q 004178 608 -SR--LHGFDIGTCLEVIEHM--EEDEASQFGNIVLSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 608 -~~--d~sFDlVVc~eVLEHL--~~d~~~~fleeI~rvLKPG-~LIISTPN~e 654 (770)
+. .++||+|+|..++||+ ..+....+++++.++|||| .+++++|+.+
T Consensus 107 ~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 159 (313)
T 3bgv_A 107 KFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSF 159 (313)
T ss_dssp TCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHH
T ss_pred hcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChH
Confidence 42 4589999999999998 3244567777899999998 8899999853
No 83
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.39 E-value=1.2e-12 Score=132.27 Aligned_cols=122 Identities=14% Similarity=0.061 Sum_probs=94.7
Q ss_pred chHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCC
Q 004178 513 PPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTD 592 (770)
Q Consensus 513 PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~ 592 (770)
.++++.....+.+.+...++.+|||+|||+|.++..+++..++..+|+|+|+++.+++.|++++... ..
T Consensus 75 ~~~~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~-----------~~ 143 (255)
T 3mb5_A 75 QIVHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWA-----------GF 143 (255)
T ss_dssp CCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHH-----------TC
T ss_pred ccccHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHc-----------CC
Confidence 3456666677888888888999999999999999999988324589999999999999999987532 11
Q ss_pred CccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 593 VKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 593 ~~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
..++++.++|+.+. ...+.||+|++ +++ +.. .+++++.++|+|| .+++.+|+.
T Consensus 144 ~~~v~~~~~d~~~~-~~~~~~D~v~~-----~~~-~~~-~~l~~~~~~L~~gG~l~~~~~~~ 197 (255)
T 3mb5_A 144 DDRVTIKLKDIYEG-IEEENVDHVIL-----DLP-QPE-RVVEHAAKALKPGGFFVAYTPCS 197 (255)
T ss_dssp TTTEEEECSCGGGC-CCCCSEEEEEE-----CSS-CGG-GGHHHHHHHEEEEEEEEEEESSH
T ss_pred CCceEEEECchhhc-cCCCCcCEEEE-----CCC-CHH-HHHHHHHHHcCCCCEEEEEECCH
Confidence 23499999999865 44578999987 344 232 4455799999998 777777764
No 84
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.39 E-value=6.4e-13 Score=136.42 Aligned_cols=121 Identities=13% Similarity=-0.006 Sum_probs=83.0
Q ss_pred cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccc-----c---CCC-CC--------
Q 004178 529 ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLD-----A---AVP-CT-------- 591 (770)
Q Consensus 529 ~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~-----~---l~p-r~-------- 591 (770)
..++.+|||||||+|.++..++..+ ..+|+|+|+|+.|++.|++++......+.. + +.. ..
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~--~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~ 130 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDS--FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEK 130 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhh--hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHH
Confidence 3467899999999998887666654 247999999999999999876431100000 0 000 00
Q ss_pred CCccEE-EEECCcccc-CC---CCCCccEEEeccccccCCh--hHHHHHHHHHHHcccCC-EEEEEec
Q 004178 592 DVKSAV-LFDGSITVF-DS---RLHGFDIGTCLEVIEHMEE--DEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 592 ~~~~Ve-f~~GDaedl-p~---~d~sFDlVVc~eVLEHL~~--d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
...++. +.++|+.+. +. ..++||+|+++.++||+.. ++...++++++++|||| .++++++
T Consensus 131 ~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 131 LRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 011354 899999874 32 2568999999999999732 34456667899999999 7777654
No 85
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.38 E-value=4.3e-12 Score=134.81 Aligned_cols=161 Identities=14% Similarity=0.099 Sum_probs=113.0
Q ss_pred HHHHHhhcCC-CCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 522 YALQHIKESC-ATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 522 ~Il~~L~~~~-~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
.+++.+...+ +.+|||||||+|.++..+++.. +..+++++|+ +.+++.|++++... ....++++..
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~-----------~~~~~v~~~~ 235 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAH-----------DLGGRVEFFE 235 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHT-----------TCGGGEEEEE
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhc-----------CCCCceEEEe
Confidence 3445555555 8899999999999999999876 4579999999 88999999876431 2234799999
Q ss_pred CCccccCC-CCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchh---HHHhhhccccCCCCCchhh
Q 004178 601 GSITVFDS-RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYN---AILQKSSSTIQEDDPDEKT 675 (770)
Q Consensus 601 GDaedlp~-~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN---~lf~~~~~~g~~e~pde~~ 675 (770)
+|+.+.+. ...+||+|++..++||++++....+++++.++|||| .+++..+..... +.+....
T Consensus 236 ~d~~~~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~------------ 303 (352)
T 3mcz_A 236 KNLLDARNFEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADF------------ 303 (352)
T ss_dssp CCTTCGGGGTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHH------------
T ss_pred CCcccCcccCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHh------------
Confidence 99987652 346799999999999999777778888999999998 666655432111 1111100
Q ss_pred hhccccccCCCcccccCHHHHHHHHHHHHHHCCcEEEE
Q 004178 676 QLQSCKFRNHDHKFEWTRDQFNCWATELAARHNYSVEF 713 (770)
Q Consensus 676 ~~~~~~fRh~DHkfewTreEF~~Wa~~La~r~GY~VEF 713 (770)
...-+....+..+++.+++++ +.++.||.+.-
T Consensus 304 --~~~~~~~~~~~~~~t~~e~~~----ll~~aGf~~~~ 335 (352)
T 3mcz_A 304 --SLHMMVNTNHGELHPTPWIAG----VVRDAGLAVGE 335 (352)
T ss_dssp --HHHHHHHSTTCCCCCHHHHHH----HHHHTTCEEEE
T ss_pred --hHHHHhhCCCCCcCCHHHHHH----HHHHCCCceee
Confidence 000011112334578888885 45788998865
No 86
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.38 E-value=6.9e-12 Score=134.97 Aligned_cols=109 Identities=15% Similarity=0.135 Sum_probs=90.5
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc--C
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF--D 607 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl--p 607 (770)
....+|||||||+|.++..+++.. +..+++++|+ +.+++.|++++.. .....++++..+|+.+. +
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~-----------~~~~~~v~~~~~d~~~~~~~ 244 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAG-----------LSGSERIHGHGANLLDRDVP 244 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTT-----------CTTGGGEEEEECCCCSSSCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHh-----------cCcccceEEEEccccccCCC
Confidence 467899999999999999999876 4579999999 9999999987642 11235899999999875 3
Q ss_pred CCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 608 SRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 608 ~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
.+ ++||+|++..++||+++++...++++++++|||| .++|..+.
T Consensus 245 ~p-~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (363)
T 3dp7_A 245 FP-TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETL 289 (363)
T ss_dssp CC-CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CC-CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeec
Confidence 44 7899999999999999777778888999999998 77775543
No 87
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.38 E-value=1.9e-12 Score=124.43 Aligned_cols=105 Identities=11% Similarity=0.123 Sum_probs=79.4
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC-C
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD-S 608 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp-~ 608 (770)
.++.+|||+|||+|.++..|++.+ .+|+|+|+|+.|++.|++++... +..++++.++++..++ .
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~---~~v~~vD~s~~~l~~a~~~~~~~------------~~~~v~~~~~~~~~l~~~ 85 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLS---KKVYAFDVQEQALGKTSQRLSDL------------GIENTELILDGHENLDHY 85 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHH------------TCCCEEEEESCGGGGGGT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHc------------CCCcEEEEeCcHHHHHhh
Confidence 357899999999999999999985 89999999999999999987532 2368999998887753 3
Q ss_pred CCCCccEEEec-ccccc-------CChhHHHHHHHHHHHcccCC-EEEEEe
Q 004178 609 RLHGFDIGTCL-EVIEH-------MEEDEASQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 609 ~d~sFDlVVc~-eVLEH-------L~~d~~~~fleeI~rvLKPG-~LIIST 650 (770)
.++.||+|++. ..+++ .+ +....+++++.++|||| .+++..
T Consensus 86 ~~~~fD~v~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~ 135 (185)
T 3mti_A 86 VREPIRAAIFNLGYLPSADKSVITKP-HTTLEAIEKILDRLEVGGRLAIMI 135 (185)
T ss_dssp CCSCEEEEEEEEC-----------CH-HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCcCEEEEeCCCCCCcchhcccCh-hhHHHHHHHHHHhcCCCcEEEEEE
Confidence 35789999887 34333 22 33445556799999998 555544
No 88
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.38 E-value=4.1e-12 Score=124.45 Aligned_cols=114 Identities=11% Similarity=0.040 Sum_probs=91.5
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
..+++.+...++.+|||+|||+|.++..+++.+ +..+|+|+|+++.+++.|++++... +..++++.+
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~------------~~~~v~~~~ 96 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKF------------VARNVTLVE 96 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHH------------TCTTEEEEE
T ss_pred HHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHh------------CCCcEEEEe
Confidence 355667777788999999999999999999886 5689999999999999999877532 335799999
Q ss_pred CCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 601 GSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 601 GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
+|+.+.......||+|++..+++ ....+++++.++|||| .+++.++.
T Consensus 97 ~d~~~~~~~~~~~D~i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 97 AFAPEGLDDLPDPDRVFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp CCTTTTCTTSCCCSEEEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred CChhhhhhcCCCCCEEEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 99976655557899999998875 2335666799999998 77776544
No 89
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.37 E-value=2.8e-12 Score=132.60 Aligned_cols=127 Identities=13% Similarity=0.052 Sum_probs=82.8
Q ss_pred HHHHHHhhc--CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhccc-----ccCCCCCC-
Q 004178 521 EYALQHIKE--SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKL-----DAAVPCTD- 592 (770)
Q Consensus 521 e~Il~~L~~--~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~-----~~l~pr~~- 592 (770)
..+.+.+.. .++.+|||||||+|.+...++... ..+|+|+|+|+.|++.|++++........ .......+
T Consensus 59 ~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~ 136 (289)
T 2g72_A 59 RCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSH--FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGK 136 (289)
T ss_dssp HHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGG--CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCS
T ss_pred HHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccC--CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCc
Confidence 344444433 367899999999999655444432 26999999999999999886632100000 00000000
Q ss_pred ------------CccEEEEECCccc-cCC-----CCCCccEEEeccccccCChh--HHHHHHHHHHHcccCC-EEEEE
Q 004178 593 ------------VKSAVLFDGSITV-FDS-----RLHGFDIGTCLEVIEHMEED--EASQFGNIVLSSFRPR-ILIVS 649 (770)
Q Consensus 593 ------------~~~Vef~~GDaed-lp~-----~d~sFDlVVc~eVLEHL~~d--~~~~fleeI~rvLKPG-~LIIS 649 (770)
...+++.++|+.+ +++ ++++||+|+|..+++|+.++ ....+++++.++|||| .+++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 137 GECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp CCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 0125788889987 543 24569999999999996533 4566677899999998 66655
No 90
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.36 E-value=1.8e-12 Score=130.20 Aligned_cols=106 Identities=11% Similarity=0.107 Sum_probs=82.8
Q ss_pred cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc--
Q 004178 529 ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF-- 606 (770)
Q Consensus 529 ~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl-- 606 (770)
..++.+|||||||+|.++..+++.+. .+|+|+|+|+.|++.|+++... ...+++++++|+.++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~-------------~~~~v~~~~~d~~~~~~ 122 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPR-------------QTHKVIPLKGLWEDVAP 122 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCE--EEEEEEECCHHHHHHHHHHGGG-------------CSSEEEEEESCHHHHGG
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCC--CeEEEEcCCHHHHHHHHHHHHh-------------cCCCeEEEecCHHHhhc
Confidence 34578999999999999999988652 5999999999999999986631 225799999999988
Q ss_pred CCCCCCccEEEe-cccc--ccCChhHHHHHHHHHHHcccCC-EEEEE
Q 004178 607 DSRLHGFDIGTC-LEVI--EHMEEDEASQFGNIVLSSFRPR-ILIVS 649 (770)
Q Consensus 607 p~~d~sFDlVVc-~eVL--EHL~~d~~~~fleeI~rvLKPG-~LIIS 649 (770)
++.+++||+|++ ...+ ++........+++++.++|||| .+++.
T Consensus 123 ~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 123 TLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp GSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 777889999999 5543 2222234456677899999999 55544
No 91
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.36 E-value=5.7e-12 Score=131.31 Aligned_cols=110 Identities=11% Similarity=0.145 Sum_probs=88.2
Q ss_pred CCCCEEEEEcCcc---chHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc
Q 004178 530 SCATTLVDFGCGS---GSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF 606 (770)
Q Consensus 530 ~~~~rVLDIGCGt---G~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl 606 (770)
....+|||||||+ |.++..+.+.. +..+|+|+|+|+.|++.|++++. ...+++++++|+.+.
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~~-p~~~v~~vD~sp~~l~~Ar~~~~--------------~~~~v~~~~~D~~~~ 140 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSVN-PDARVVYVDIDPMVLTHGRALLA--------------KDPNTAVFTADVRDP 140 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHHC-TTCEEEEEESSHHHHHHHHHHHT--------------TCTTEEEEECCTTCH
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHhC-CCCEEEEEECChHHHHHHHHhcC--------------CCCCeEEEEeeCCCc
Confidence 3458999999999 98887666554 34799999999999999998762 124799999999753
Q ss_pred C-----------CCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCc
Q 004178 607 D-----------SRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 607 p-----------~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~e 654 (770)
+ +....||+|++..++||++++....+++++.++|+|| .++++....+
T Consensus 141 ~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~ 200 (274)
T 2qe6_A 141 EYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDT 200 (274)
T ss_dssp HHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCS
T ss_pred hhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence 2 2225899999999999999665667778899999999 8888776654
No 92
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.36 E-value=2.5e-12 Score=126.96 Aligned_cols=157 Identities=10% Similarity=0.095 Sum_probs=101.5
Q ss_pred HHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcc
Q 004178 525 QHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSIT 604 (770)
Q Consensus 525 ~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDae 604 (770)
+.+...++.+|||+|||+|.++..|++.. +..+|+|+|+|+.|++.+.++...... ..+.+++++.++|+.
T Consensus 21 ~~l~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~--------~~~~~~v~~~~~d~~ 91 (218)
T 3mq2_A 21 EQLRSQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPA--------KGGLPNLLYLWATAE 91 (218)
T ss_dssp HHHHTTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGG--------GTCCTTEEEEECCST
T ss_pred HHhhccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhh--------hcCCCceEEEecchh
Confidence 34455678899999999999999999875 458999999999999865443322111 124458999999999
Q ss_pred ccCCCCCCccEEEecc---cc--ccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCCCCchhhhhc
Q 004178 605 VFDSRLHGFDIGTCLE---VI--EHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQ 678 (770)
Q Consensus 605 dlp~~d~sFDlVVc~e---VL--EHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e~pde~~~~~ 678 (770)
++++.++. |.|.... .. +|++ ++ ..+++++.++|||| .++++.....+. ...
T Consensus 92 ~l~~~~~~-d~v~~~~~~~~~~~~~~~-~~-~~~l~~~~~~LkpgG~l~~~~~~~~~~---~~~---------------- 149 (218)
T 3mq2_A 92 RLPPLSGV-GELHVLMPWGSLLRGVLG-SS-PEMLRGMAAVCRPGASFLVALNLHAWR---PSV---------------- 149 (218)
T ss_dssp TCCSCCCE-EEEEEESCCHHHHHHHHT-SS-SHHHHHHHHTEEEEEEEEEEEEGGGBT---TBC----------------
T ss_pred hCCCCCCC-CEEEEEccchhhhhhhhc-cH-HHHHHHHHHHcCCCcEEEEEecccccc---ccc----------------
Confidence 98887666 7766322 23 2555 22 35566799999999 666644332111 100
Q ss_pred cccccCCCcccccCHHHHHHHHHHHHHHCCcEEEEEee
Q 004178 679 SCKFRNHDHKFEWTRDQFNCWATELAARHNYSVEFSGV 716 (770)
Q Consensus 679 ~~~fRh~DHkfewTreEF~~Wa~~La~r~GY~VEF~Gv 716 (770)
...+ ....++...+.+++..+..++||.+.-...
T Consensus 150 -~~~~---~~~~~~~~~~~~~l~~~l~~aGf~i~~~~~ 183 (218)
T 3mq2_A 150 -PEVG---EHPEPTPDSADEWLAPRYAEAGWKLADCRY 183 (218)
T ss_dssp -GGGT---TCCCCCHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred -cccc---cCCccchHHHHHHHHHHHHHcCCCceeeec
Confidence 0011 111234445555555777889999865443
No 93
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.36 E-value=4.4e-12 Score=126.05 Aligned_cols=110 Identities=15% Similarity=0.182 Sum_probs=90.5
Q ss_pred HHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEE
Q 004178 520 VEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLF 599 (770)
Q Consensus 520 ~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~ 599 (770)
...+.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++.. .+ ++++.
T Consensus 59 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~------------~~--~v~~~ 121 (231)
T 1vbf_A 59 GIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSY------------YN--NIKLI 121 (231)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTT------------CS--SEEEE
T ss_pred HHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhh------------cC--CeEEE
Confidence 4456666677778899999999999999999886 7999999999999999987631 12 79999
Q ss_pred ECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCc
Q 004178 600 DGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 600 ~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~e 654 (770)
.+|+.+.....++||+|++..+++|+. +++.++|||| .+++.+++..
T Consensus 122 ~~d~~~~~~~~~~fD~v~~~~~~~~~~--------~~~~~~L~pgG~l~~~~~~~~ 169 (231)
T 1vbf_A 122 LGDGTLGYEEEKPYDRVVVWATAPTLL--------CKPYEQLKEGGIMILPIGVGR 169 (231)
T ss_dssp ESCGGGCCGGGCCEEEEEESSBBSSCC--------HHHHHTEEEEEEEEEEECSSS
T ss_pred ECCcccccccCCCccEEEECCcHHHHH--------HHHHHHcCCCcEEEEEEcCCC
Confidence 999987433457899999999999998 2478899998 7777777643
No 94
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.35 E-value=3.1e-12 Score=125.86 Aligned_cols=115 Identities=10% Similarity=0.115 Sum_probs=92.1
Q ss_pred HHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEE
Q 004178 520 VEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLF 599 (770)
Q Consensus 520 ~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~ 599 (770)
...+.+.+...++.+|||+|||+|.++..+++..++..+|+|+|+++.+++.|++++... +..++++.
T Consensus 66 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------------~~~~v~~~ 133 (215)
T 2yxe_A 66 VGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKL------------GYDNVIVI 133 (215)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH------------TCTTEEEE
T ss_pred HHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc------------CCCCeEEE
Confidence 345556666677889999999999999999987644579999999999999999877431 23469999
Q ss_pred ECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCc
Q 004178 600 DGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 600 ~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~e 654 (770)
.+|+.......+.||+|++..+++|++ +++.++|||| .+++.+++..
T Consensus 134 ~~d~~~~~~~~~~fD~v~~~~~~~~~~--------~~~~~~L~pgG~lv~~~~~~~ 181 (215)
T 2yxe_A 134 VGDGTLGYEPLAPYDRIYTTAAGPKIP--------EPLIRQLKDGGKLLMPVGRYL 181 (215)
T ss_dssp ESCGGGCCGGGCCEEEEEESSBBSSCC--------HHHHHTEEEEEEEEEEESSSS
T ss_pred ECCcccCCCCCCCeeEEEECCchHHHH--------HHHHHHcCCCcEEEEEECCCC
Confidence 999865443357899999999999998 2588899998 7777777653
No 95
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.35 E-value=9.1e-12 Score=123.69 Aligned_cols=109 Identities=12% Similarity=0.064 Sum_probs=87.8
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCc-cEEEEE
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVK-SAVLFD 600 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~-~Vef~~ 600 (770)
.+++.+...++.+|||+|||+|.++..+++.+ .+|+|+|+++++++.|++++.. .+.. ++++.+
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~------------~g~~~~v~~~~ 110 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGSGSVSVEWCLAG---GRAITIEPRADRIENIQKNIDT------------YGLSPRMRAVQ 110 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH------------TTCTTTEEEEE
T ss_pred HHHHhcCCCCCCEEEEecCCCCHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHH------------cCCCCCEEEEe
Confidence 45566677778999999999999999999885 8999999999999999987743 2334 799999
Q ss_pred CCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 601 GSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 601 GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
+|+.+.......||+|++...+ +. . +++++.++|||| .+++.+++
T Consensus 111 ~d~~~~~~~~~~~D~v~~~~~~-----~~-~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 111 GTAPAALADLPLPEAVFIGGGG-----SQ-A-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp SCTTGGGTTSCCCSEEEECSCC-----CH-H-HHHHHHHHSCTTCEEEEEECS
T ss_pred CchhhhcccCCCCCEEEECCcc-----cH-H-HHHHHHHhcCCCcEEEEEecC
Confidence 9998844444689999987744 22 2 666799999998 88877665
No 96
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.35 E-value=6.1e-12 Score=134.45 Aligned_cols=115 Identities=14% Similarity=0.115 Sum_probs=91.5
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
.+++.+...++.+|||||||+|.++..+++.. +..+++|+|+ +.+++.|++++... ....++++..+
T Consensus 173 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~-----------~~~~~v~~~~~ 239 (374)
T 1qzz_A 173 APADAYDWSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADA-----------GLADRVTVAEG 239 (374)
T ss_dssp HHHHTSCCTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHT-----------TCTTTEEEEEC
T ss_pred HHHHhCCCCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhc-----------CCCCceEEEeC
Confidence 34455555567899999999999999999876 4579999999 99999999877431 12247999999
Q ss_pred CccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEec
Q 004178 602 SITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 602 Daedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
|+.+ +.+ ..||+|++..++||++++....+++++.++|||| .+++..+
T Consensus 240 d~~~-~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 240 DFFK-PLP-VTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp CTTS-CCS-CCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCC-cCC-CCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 9875 222 3499999999999999666667788899999998 6776655
No 97
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.35 E-value=4.8e-12 Score=133.74 Aligned_cols=109 Identities=19% Similarity=0.099 Sum_probs=89.2
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
.+..+|||+|||+|.++..+++.. +..+++++|+ +.+++.|++++... ....++++..+|+.+ +.+
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~-----------~~~~~v~~~~~d~~~-~~p 233 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDT-----------GLSGRAQVVVGSFFD-PLP 233 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHT-----------TCTTTEEEEECCTTS-CCC
T ss_pred CCCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhc-----------CcCcCeEEecCCCCC-CCC
Confidence 346899999999999999999876 4579999999 99999999877431 223579999999973 333
Q ss_pred CCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 610 LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 610 d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
. +||+|++..++||++++....++++++++|||| .++|..+..
T Consensus 234 ~-~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 234 A-GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp C-SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred C-CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 3 899999999999999776778888999999998 777766543
No 98
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.34 E-value=5.6e-12 Score=126.87 Aligned_cols=122 Identities=13% Similarity=0.152 Sum_probs=95.5
Q ss_pred hHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCC
Q 004178 514 PLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDV 593 (770)
Q Consensus 514 PL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~ 593 (770)
+++......+++.+...++.+|||+|||+|.++..+++..++..+|+|+|+++.+++.|++++.... +.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~-----------g~ 147 (258)
T 2pwy_A 79 PTYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFW-----------QV 147 (258)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC-----------CC
T ss_pred cccchHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhc-----------CC
Confidence 4555556677777777788999999999999999999873244899999999999999998774310 23
Q ss_pred ccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 594 KSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 594 ~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
.++++.++|+.+.+..++.||+|++ +++ +.. .+++++.++|+|| .+++.+|+.
T Consensus 148 ~~v~~~~~d~~~~~~~~~~~D~v~~-----~~~-~~~-~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 148 ENVRFHLGKLEEAELEEAAYDGVAL-----DLM-EPW-KVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp CCEEEEESCGGGCCCCTTCEEEEEE-----ESS-CGG-GGHHHHHHHEEEEEEEEEEESCH
T ss_pred CCEEEEECchhhcCCCCCCcCEEEE-----CCc-CHH-HHHHHHHHhCCCCCEEEEEeCCH
Confidence 5799999999988666678999997 344 222 4456799999998 888887764
No 99
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.33 E-value=3.1e-12 Score=131.00 Aligned_cols=125 Identities=12% Similarity=0.063 Sum_probs=96.4
Q ss_pred hHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCC
Q 004178 514 PLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDV 593 (770)
Q Consensus 514 PL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~ 593 (770)
++++.....+++.+...++.+|||+|||+|.++..+++..++..+|+|+|+++.+++.|++++..... ...
T Consensus 82 ~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g---------~~~ 152 (280)
T 1i9g_A 82 VIYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYG---------QPP 152 (280)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHT---------SCC
T ss_pred eecHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC---------CCC
Confidence 45555666777777777889999999999999999998532447999999999999999987743100 013
Q ss_pred ccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCc
Q 004178 594 KSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 594 ~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~e 654 (770)
.++++.++|+.+.+..++.||+|++ +++ ++. .+++++.++|+|| .+++.+|+.+
T Consensus 153 ~~v~~~~~d~~~~~~~~~~~D~v~~-----~~~-~~~-~~l~~~~~~L~pgG~l~~~~~~~~ 207 (280)
T 1i9g_A 153 DNWRLVVSDLADSELPDGSVDRAVL-----DML-APW-EVLDAVSRLLVAGGVLMVYVATVT 207 (280)
T ss_dssp TTEEEECSCGGGCCCCTTCEEEEEE-----ESS-CGG-GGHHHHHHHEEEEEEEEEEESSHH
T ss_pred CcEEEEECchHhcCCCCCceeEEEE-----CCc-CHH-HHHHHHHHhCCCCCEEEEEeCCHH
Confidence 5799999999988776788999998 333 222 4455799999998 8888888753
No 100
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.33 E-value=2.8e-11 Score=129.41 Aligned_cols=116 Identities=11% Similarity=0.064 Sum_probs=93.5
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
..+++.+...++.+|||||||+|.++..+++.. +..+++|+|+ +.+++.|++++... ....++++..
T Consensus 180 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~-----------~~~~~v~~~~ 246 (359)
T 1x19_A 180 QLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEK-----------GVADRMRGIA 246 (359)
T ss_dssp HHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHT-----------TCTTTEEEEE
T ss_pred HHHHHhcCCCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhc-----------CCCCCEEEEe
Confidence 345555555678899999999999999999876 4579999999 99999999877531 1223699999
Q ss_pred CCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEec
Q 004178 601 GSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 601 GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
+|+.+.+.+. +|+|++..++||++++....+++++.++|||| .+++..+
T Consensus 247 ~d~~~~~~~~--~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~ 296 (359)
T 1x19_A 247 VDIYKESYPE--ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDM 296 (359)
T ss_dssp CCTTTSCCCC--CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred CccccCCCCC--CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 9998876543 49999999999999766778888999999998 6666553
No 101
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.32 E-value=1.9e-12 Score=130.29 Aligned_cols=120 Identities=16% Similarity=0.172 Sum_probs=94.1
Q ss_pred hHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCC
Q 004178 514 PLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDV 593 (770)
Q Consensus 514 PL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~ 593 (770)
|....-+..+...+. .+.+|||+|||+|.++..++... |..+|+|+|+|+.|++.|++++.. .+.
T Consensus 34 p~ld~fY~~~~~~l~--~~~~VLDlGCG~GplAl~l~~~~-p~a~~~A~Di~~~~leiar~~~~~------------~g~ 98 (200)
T 3fzg_A 34 ATLNDFYTYVFGNIK--HVSSILDFGCGFNPLALYQWNEN-EKIIYHAYDIDRAEIAFLSSIIGK------------LKT 98 (200)
T ss_dssp GGHHHHHHHHHHHSC--CCSEEEEETCTTHHHHHHHHCSS-CCCEEEEECSCHHHHHHHHHHHHH------------SCC
T ss_pred HhHHHHHHHHHhhcC--CCCeEEEecCCCCHHHHHHHhcC-CCCEEEEEeCCHHHHHHHHHHHHh------------cCC
Confidence 455555667777764 48899999999999999998876 456999999999999999998753 233
Q ss_pred c-cEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEecCC
Q 004178 594 K-SAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPNY 653 (770)
Q Consensus 594 ~-~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTPN~ 653 (770)
. ++++ +|....+ ..+.||+|+...++||+ ++....+. .+++.|+||.++|+.|..
T Consensus 99 ~~~v~~--~d~~~~~-~~~~~DvVLa~k~LHlL-~~~~~al~-~v~~~L~pggvfISfptk 154 (200)
T 3fzg_A 99 TIKYRF--LNKESDV-YKGTYDVVFLLKMLPVL-KQQDVNIL-DFLQLFHTQNFVISFPIK 154 (200)
T ss_dssp SSEEEE--ECCHHHH-TTSEEEEEEEETCHHHH-HHTTCCHH-HHHHTCEEEEEEEEEECC
T ss_pred CccEEE--ecccccC-CCCCcChhhHhhHHHhh-hhhHHHHH-HHHHHhCCCCEEEEeChH
Confidence 3 5666 5654443 34789999999999999 46555555 599999999999999853
No 102
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.32 E-value=2.4e-11 Score=131.00 Aligned_cols=116 Identities=18% Similarity=0.201 Sum_probs=93.0
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
..+.+.+...+..+|||+|||+|.++..+++.. +..+++++|+ +.+++.|++++... ....++++..
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~-----------~l~~~v~~~~ 258 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGR-----------GLADRCEILP 258 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHT-----------TCTTTEEEEE
T ss_pred HHHHHhCCCccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhc-----------CcCCceEEec
Confidence 344455555667899999999999999999876 4579999999 99999999877431 2235799999
Q ss_pred CCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEec
Q 004178 601 GSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 601 GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
+|+.+ +.+. +||+|++..++||++++....+++++.+.|||| .++|..+
T Consensus 259 ~d~~~-~~p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 308 (369)
T 3gwz_A 259 GDFFE-TIPD-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDN 308 (369)
T ss_dssp CCTTT-CCCS-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred cCCCC-CCCC-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 99973 3333 899999999999999776667888999999998 7666544
No 103
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.32 E-value=5e-12 Score=120.18 Aligned_cols=118 Identities=14% Similarity=0.203 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCcc
Q 004178 516 SKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKS 595 (770)
Q Consensus 516 ~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~ 595 (770)
......++.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++... ....+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~-----------~~~~~ 83 (192)
T 1l3i_A 18 AMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRH-----------GLGDN 83 (192)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHT-----------TCCTT
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHc-----------CCCcc
Confidence 34444566677777788999999999999999999887 79999999999999999877431 11257
Q ss_pred EEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 596 AVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 596 Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
+++.++|+.+.......||+|++..+++|+ ..+++.+.++|+|| .+++.+++
T Consensus 84 ~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~-----~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 84 VTLMEGDAPEALCKIPDIDIAVVGGSGGEL-----QEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp EEEEESCHHHHHTTSCCEEEEEESCCTTCH-----HHHHHHHHHTEEEEEEEEEEECB
T ss_pred eEEEecCHHHhcccCCCCCEEEECCchHHH-----HHHHHHHHHhcCCCcEEEEEecC
Confidence 999999987722222589999999888765 35667799999998 77776654
No 104
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.32 E-value=1.2e-11 Score=124.73 Aligned_cols=117 Identities=9% Similarity=0.094 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCc
Q 004178 515 LSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVK 594 (770)
Q Consensus 515 L~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~ 594 (770)
+.+...+++...+...++.+|||+|||+|..+..|++.. +..+|+|+|+++.+++.|++++... ....
T Consensus 55 ~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~-----------~~~~ 122 (232)
T 3ntv_A 55 VDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATY-----------HFEN 122 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHT-----------TCTT
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHc-----------CCCC
Confidence 334444555555555678999999999999999999854 4589999999999999999987531 1224
Q ss_pred cEEEEECCccccC--CCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEE
Q 004178 595 SAVLFDGSITVFD--SRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIV 648 (770)
Q Consensus 595 ~Vef~~GDaedlp--~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LII 648 (770)
+++++++|+.+.. ...+.||+|++....++ ...+++.+.++|||| .+++
T Consensus 123 ~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~~~-----~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 123 QVRIIEGNALEQFENVNDKVYDMIFIDAAKAQ-----SKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp TEEEEESCGGGCHHHHTTSCEEEEEEETTSSS-----HHHHHHHHGGGEEEEEEEEE
T ss_pred cEEEEECCHHHHHHhhccCCccEEEEcCcHHH-----HHHHHHHHHHhcCCCeEEEE
Confidence 7999999997743 22578999997654333 335666799999999 5555
No 105
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.31 E-value=6.3e-11 Score=117.62 Aligned_cols=148 Identities=11% Similarity=0.066 Sum_probs=104.1
Q ss_pred CCCCEEEEEcCc-cchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc-C
Q 004178 530 SCATTLVDFGCG-SGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF-D 607 (770)
Q Consensus 530 ~~~~rVLDIGCG-tG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl-p 607 (770)
.++.+|||+||| +|.++..+++.. ..+|+|+|+++.+++.|++++.. .+. ++++.++|+..+ +
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~------------~~~-~v~~~~~d~~~~~~ 118 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIER------------NNS-NVRLVKSNGGIIKG 118 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHH------------TTC-CCEEEECSSCSSTT
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHH------------hCC-CcEEEeCCchhhhh
Confidence 467899999999 999999999873 27999999999999999988742 223 799999997543 2
Q ss_pred CCCCCccEEEeccccccCCh-----------------hHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhccccCCC
Q 004178 608 SRLHGFDIGTCLEVIEHMEE-----------------DEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSSSTIQED 669 (770)
Q Consensus 608 ~~d~sFDlVVc~eVLEHL~~-----------------d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~~~g~~e 669 (770)
..++.||+|++.-.+.+... +....+++++.++|||| .+++.+|...
T Consensus 119 ~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--------------- 183 (230)
T 3evz_A 119 VVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE--------------- 183 (230)
T ss_dssp TCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH---------------
T ss_pred cccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH---------------
Confidence 33578999999866655432 11256777899999998 7777665521
Q ss_pred CCchhhhhccccccCCCcccccCHHHHHHHHHHHHHHCCcEEEEEeeeCCCCCCCCccceeeeeecCC
Q 004178 670 DPDEKTQLQSCKFRNHDHKFEWTRDQFNCWATELAARHNYSVEFSGVGGSGDREPGFASQIAVFRSRT 737 (770)
Q Consensus 670 ~pde~~~~~~~~fRh~DHkfewTreEF~~Wa~~La~r~GY~VEF~GvG~~p~~e~Gf~TQiAVF~R~~ 737 (770)
...+++. ....++||.++...... ......+-+|.|..
T Consensus 184 ---------------------~~~~~~~----~~l~~~g~~~~~~~~~~-----g~~~~~~l~f~~~~ 221 (230)
T 3evz_A 184 ---------------------KLLNVIK----ERGIKLGYSVKDIKFKV-----GTRWRHSLIFFKGI 221 (230)
T ss_dssp ---------------------HHHHHHH----HHHHHTTCEEEEEEECC-----CC-CEEEEEEECCC
T ss_pred ---------------------hHHHHHH----HHHHHcCCceEEEEecC-----CCeEEEEEEEeccc
Confidence 0112333 34567899887765543 12356888999833
No 106
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.31 E-value=4.5e-12 Score=128.64 Aligned_cols=102 Identities=13% Similarity=0.111 Sum_probs=81.3
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc--C
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF--D 607 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl--p 607 (770)
.++.+|||||||+|..+..+++..+ .+|+|||+++.+++.|+++.. ....++.+..+|+.+. +
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~-------------~~~~~~~~~~~~a~~~~~~ 123 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAP-------------RQTHKVIPLKGLWEDVAPT 123 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGG-------------GCSSEEEEEESCHHHHGGG
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHh-------------hCCCceEEEeehHHhhccc
Confidence 4678999999999999999998753 789999999999999998763 2345789999998764 4
Q ss_pred CCCCCccEEEe-----ccccccCChhHHHHHHHHHHHcccCC-EEEE
Q 004178 608 SRLHGFDIGTC-----LEVIEHMEEDEASQFGNIVLSSFRPR-ILIV 648 (770)
Q Consensus 608 ~~d~sFDlVVc-----~eVLEHL~~d~~~~fleeI~rvLKPG-~LII 648 (770)
.++++||.|++ ..+++|+. +...+.++++|+|||| .+++
T Consensus 124 ~~~~~FD~i~~D~~~~~~~~~~~~--~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 124 LPDGHFDGILYDTYPLSEETWHTH--QFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp SCTTCEEEEEECCCCCBGGGTTTH--HHHHHHHTHHHHEEEEEEEEE
T ss_pred ccccCCceEEEeeeecccchhhhc--chhhhhhhhhheeCCCCEEEE
Confidence 56788999974 56677776 4456667899999999 4444
No 107
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.31 E-value=1.2e-11 Score=117.02 Aligned_cols=114 Identities=11% Similarity=0.150 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCc
Q 004178 515 LSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVK 594 (770)
Q Consensus 515 L~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~ 594 (770)
......+.+.+.+...++.+|||+|||+|.++..+++.. .+|+|+|+++.+++.|++++.. .+..
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~------------~~~~ 83 (183)
T 2yxd_A 19 TKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAKRC---KFVYAIDYLDGAIEVTKQNLAK------------FNIK 83 (183)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHTTS---SEEEEEECSHHHHHHHHHHHHH------------TTCC
T ss_pred CHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHHHHH------------cCCC
Confidence 334445566677777778899999999999999999843 8999999999999999987742 2335
Q ss_pred cEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 595 SAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 595 ~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
++++.++|+.+ +.+.+.||+|++..+ ++ ...+++.+.++ || .+++.+++
T Consensus 84 ~~~~~~~d~~~-~~~~~~~D~i~~~~~-~~-----~~~~l~~~~~~--~gG~l~~~~~~ 133 (183)
T 2yxd_A 84 NCQIIKGRAED-VLDKLEFNKAFIGGT-KN-----IEKIIEILDKK--KINHIVANTIV 133 (183)
T ss_dssp SEEEEESCHHH-HGGGCCCSEEEECSC-SC-----HHHHHHHHHHT--TCCEEEEEESC
T ss_pred cEEEEECCccc-cccCCCCcEEEECCc-cc-----HHHHHHHHhhC--CCCEEEEEecc
Confidence 79999999987 444578999999988 22 23555567777 76 88887765
No 108
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.30 E-value=7.4e-12 Score=132.34 Aligned_cols=116 Identities=10% Similarity=0.115 Sum_probs=93.5
Q ss_pred HHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccE
Q 004178 517 KQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSA 596 (770)
Q Consensus 517 ~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~V 596 (770)
+.....+++.+...++.+|||+|||+|.++..+++.++...+|+|+|+++++++.|++++.. .+..++
T Consensus 61 ~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~------------~g~~~v 128 (317)
T 1dl5_A 61 PSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVER------------LGIENV 128 (317)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH------------TTCCSE
T ss_pred HHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHH------------cCCCCe
Confidence 34455667777777889999999999999999998763236799999999999999987742 234569
Q ss_pred EEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 597 VLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 597 ef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
++..+|+.+.....+.||+|++..+++|+. +.+.++|||| .+++....
T Consensus 129 ~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 129 IFVCGDGYYGVPEFSPYDVIFVTVGVDEVP--------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp EEEESCGGGCCGGGCCEEEEEECSBBSCCC--------HHHHHHEEEEEEEEEEBCB
T ss_pred EEEECChhhccccCCCeEEEEEcCCHHHHH--------HHHHHhcCCCcEEEEEECC
Confidence 999999988655567899999999999998 3578899998 66666544
No 109
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.30 E-value=9.4e-12 Score=126.71 Aligned_cols=119 Identities=20% Similarity=0.214 Sum_probs=92.4
Q ss_pred hcCCchHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCC
Q 004178 509 ALFSPPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAV 588 (770)
Q Consensus 509 ~~F~PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~ 588 (770)
..++.++.....+.+...+. .++.+|||+|||+|.++..+++.. +..+|+|+|+++.+++.|+++.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~------------ 129 (269)
T 1p91_A 64 AGHYQPLRDAIVAQLRERLD-DKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY------------ 129 (269)
T ss_dssp TTTTHHHHHHHHHHHHHHSC-TTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC------------
T ss_pred CCCcHHHHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC------------
Confidence 34455555554554444332 457899999999999999999874 2379999999999999998743
Q ss_pred CCCCCccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCch
Q 004178 589 PCTDVKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEY 655 (770)
Q Consensus 589 pr~~~~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ef 655 (770)
.++.+..+|+.++++.+++||+|++..+... ++++.++|||| .+++.+|+...
T Consensus 130 -----~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~---------l~~~~~~L~pgG~l~~~~~~~~~ 183 (269)
T 1p91_A 130 -----PQVTFCVASSHRLPFSDTSMDAIIRIYAPCK---------AEELARVVKPGGWVITATPGPRH 183 (269)
T ss_dssp -----TTSEEEECCTTSCSBCTTCEEEEEEESCCCC---------HHHHHHHEEEEEEEEEEEECTTT
T ss_pred -----CCcEEEEcchhhCCCCCCceeEEEEeCChhh---------HHHHHHhcCCCcEEEEEEcCHHH
Confidence 3678999999998888889999999876432 34689999998 88888998654
No 110
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.30 E-value=7.7e-12 Score=124.84 Aligned_cols=111 Identities=9% Similarity=0.071 Sum_probs=86.3
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC--C
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD--S 608 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp--~ 608 (770)
.+.+|||||||+|.++..|++.. +..+|+|+|+|+.+++.|++++.. .+..+++++++|+.+++ +
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~------------~~~~nv~~~~~d~~~l~~~~ 104 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKD------------SEAQNVKLLNIDADTLTDVF 104 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHH------------SCCSSEEEECCCGGGHHHHC
T ss_pred CCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHH------------cCCCCEEEEeCCHHHHHhhc
Confidence 56799999999999999999875 458999999999999999987742 23468999999998865 4
Q ss_pred CCCCccEEEeccccccCChh------HHHHHHHHHHHcccCC-EEEEEecCCc
Q 004178 609 RLHGFDIGTCLEVIEHMEED------EASQFGNIVLSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 609 ~d~sFDlVVc~eVLEHL~~d------~~~~fleeI~rvLKPG-~LIISTPN~e 654 (770)
.++.||.|++.....+.... ....+++++.++|||| .+++.+.+..
T Consensus 105 ~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~ 157 (213)
T 2fca_A 105 EPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRG 157 (213)
T ss_dssp CTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHH
T ss_pred CcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHH
Confidence 56789999876544332211 0245667899999998 8888887643
No 111
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.30 E-value=1.7e-11 Score=130.62 Aligned_cols=116 Identities=9% Similarity=0.102 Sum_probs=92.1
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
.+++.+...++.+|||||||+|.++..+++.. +..+++++|+ +.+++.|++++... ....++++..+
T Consensus 174 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~-----------~~~~~v~~~~~ 240 (360)
T 1tw3_A 174 APAAAYDWTNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDE-----------GLSDRVDVVEG 240 (360)
T ss_dssp HHHHHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHT-----------TCTTTEEEEEC
T ss_pred HHHHhCCCccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhc-----------CCCCceEEEeC
Confidence 34455555667899999999999999999876 4579999999 99999999877431 12247999999
Q ss_pred CccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 602 SITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 602 Daedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
|+.+ +.+ ..||+|++..++||++++....+++++.++|||| .+++..+.
T Consensus 241 d~~~-~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 241 DFFE-PLP-RKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp CTTS-CCS-SCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCC-CCC-CCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 9875 222 3499999999999999666667778899999998 67776654
No 112
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.30 E-value=1.2e-11 Score=122.29 Aligned_cols=111 Identities=14% Similarity=0.050 Sum_probs=87.1
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC--
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD-- 607 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp-- 607 (770)
.++.+|||||||+|.++..+++.. +..+|+|+|+++.+++.|++++... +..+++++++|+.+++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~------------~~~~v~~~~~d~~~~~~~ 106 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEV------------GVPNIKLLWVDGSDLTDY 106 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHH------------CCSSEEEEECCSSCGGGT
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHc------------CCCCEEEEeCCHHHHHhh
Confidence 357899999999999999999876 4579999999999999999877431 3358999999999876
Q ss_pred CCCCCccEEEeccccccCChh------HHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 608 SRLHGFDIGTCLEVIEHMEED------EASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 608 ~~d~sFDlVVc~eVLEHL~~d------~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
+..+.||+|++.....+.... ....+++.+.++|||| .+++.+.+.
T Consensus 107 ~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 159 (214)
T 1yzh_A 107 FEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR 159 (214)
T ss_dssp SCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH
T ss_pred cCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH
Confidence 556789999998765443211 1135667899999998 888877653
No 113
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.29 E-value=3.8e-12 Score=128.27 Aligned_cols=114 Identities=11% Similarity=0.138 Sum_probs=88.9
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc-C--
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF-D-- 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl-p-- 607 (770)
.+.+|||||||+|.++..+++.. +...|+|+|+++.+++.|++++.. .+..+++++++|+.++ +
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~------------~~l~nv~~~~~Da~~~l~~~ 100 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHE------------EGLSNLRVMCHDAVEVLHKM 100 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHH------------TTCSSEEEECSCHHHHHHHH
T ss_pred CCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHH------------hCCCcEEEEECCHHHHHHHH
Confidence 57899999999999999999876 457899999999999999987742 3456899999998874 3
Q ss_pred CCCCCccEEEeccccccCChhHH------HHHHHHHHHcccCC-EEEEEecCCchhH
Q 004178 608 SRLHGFDIGTCLEVIEHMEEDEA------SQFGNIVLSSFRPR-ILIVSTPNYEYNA 657 (770)
Q Consensus 608 ~~d~sFDlVVc~eVLEHL~~d~~------~~fleeI~rvLKPG-~LIISTPN~efN~ 657 (770)
+++++||.|++.....+...... ..+++.+.++|||| .+++.|.+..+-.
T Consensus 101 ~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~ 157 (218)
T 3dxy_A 101 IPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAE 157 (218)
T ss_dssp SCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHH
T ss_pred cCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHH
Confidence 46789999998855443332111 14677899999999 8888887765543
No 114
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.28 E-value=1.9e-12 Score=125.46 Aligned_cols=125 Identities=15% Similarity=0.109 Sum_probs=74.2
Q ss_pred hHHHHHHHHHHHHhhc-CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCC
Q 004178 514 PLSKQRVEYALQHIKE-SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTD 592 (770)
Q Consensus 514 PL~~qR~e~Il~~L~~-~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~ 592 (770)
|-....++.+.+.+.. .++.+|||+|||+|.++..+++.. +..+|+|+|+++.+++.|++++.. .+
T Consensus 12 ~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~------------~~ 78 (215)
T 4dzr_A 12 PDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAER------------FG 78 (215)
T ss_dssp HHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC---------------------------
T ss_pred ccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHH------------hC
Confidence 3444555666666655 578899999999999999999885 347999999999999999887632 12
Q ss_pred CccEEEEECCccccCCCC-----CCccEEEec------cccccCChhHH------------------HHHHHHHHHcccC
Q 004178 593 VKSAVLFDGSITVFDSRL-----HGFDIGTCL------EVIEHMEEDEA------------------SQFGNIVLSSFRP 643 (770)
Q Consensus 593 ~~~Vef~~GDaedlp~~d-----~sFDlVVc~------eVLEHL~~d~~------------------~~fleeI~rvLKP 643 (770)
. ++++.++|+.+ +... +.||+|++. ..++|+..+.. ..+++++.++|||
T Consensus 79 ~-~~~~~~~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp 156 (215)
T 4dzr_A 79 A-VVDWAAADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLAR 156 (215)
T ss_dssp -----CCHHHHHH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCS
T ss_pred C-ceEEEEcchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcC
Confidence 2 78899999877 3333 799999995 34444443222 5667779999999
Q ss_pred C-E-EEEEecCC
Q 004178 644 R-I-LIVSTPNY 653 (770)
Q Consensus 644 G-~-LIISTPN~ 653 (770)
| . +++..+..
T Consensus 157 gG~l~~~~~~~~ 168 (215)
T 4dzr_A 157 GRAGVFLEVGHN 168 (215)
T ss_dssp SSEEEEEECTTS
T ss_pred CCeEEEEEECCc
Confidence 8 6 66666543
No 115
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.28 E-value=7.3e-12 Score=123.77 Aligned_cols=107 Identities=18% Similarity=0.164 Sum_probs=82.1
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCC--ccEEEEECCccccCC
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDV--KSAVLFDGSITVFDS 608 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~--~~Vef~~GDaedlp~ 608 (770)
++.+|||+|||+|.++..++..+. .+|+|+|+|+.|++.|++++.. .+. .++++.++|+.+...
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~------------~~~~~~~v~~~~~d~~~~~~ 118 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQT------------LKCSSEQAEVINQSSLDFLK 118 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHH------------TTCCTTTEEEECSCHHHHTT
T ss_pred CCCeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHH------------hCCCccceEEEECCHHHHHH
Confidence 578999999999999998776652 6899999999999999998742 233 589999999887643
Q ss_pred C--CCC-ccEEEeccccccCChhHHHHHHHHH--HHcccCC-EEEEEecCCc
Q 004178 609 R--LHG-FDIGTCLEVIEHMEEDEASQFGNIV--LSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 609 ~--d~s-FDlVVc~eVLEHL~~d~~~~fleeI--~rvLKPG-~LIISTPN~e 654 (770)
. .+. ||+|++...++ .. ....+++.+ .++|||| .+++.++...
T Consensus 119 ~~~~~~~fD~I~~~~~~~-~~--~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 119 QPQNQPHFDVVFLDPPFH-FN--LAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp SCCSSCCEEEEEECCCSS-SC--HHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred hhccCCCCCEEEECCCCC-Cc--cHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 2 568 99999987754 33 334455567 6689998 7777776644
No 116
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.28 E-value=1.8e-11 Score=129.16 Aligned_cols=115 Identities=19% Similarity=0.176 Sum_probs=91.6
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
..+.+.+...+ .+|||+|||+|.++..+++.. +..+++|+|+ +.+++.|++++.... ...++++..
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~-----------~~~~v~~~~ 223 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLL-----------AGERVSLVG 223 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHH-----------HTTSEEEEE
T ss_pred HHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcC-----------CCCcEEEec
Confidence 34444444445 899999999999999999875 4579999999 999999998764211 124799999
Q ss_pred CCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEec
Q 004178 601 GSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 601 GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
+|+.+ +.+ .+||+|++..++||++++....+++++.++|||| .+++..+
T Consensus 224 ~d~~~-~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 224 GDMLQ-EVP-SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp SCTTT-CCC-SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CCCCC-CCC-CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 99977 443 6799999999999999777778888999999998 7777654
No 117
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.28 E-value=2.1e-11 Score=118.33 Aligned_cols=112 Identities=15% Similarity=0.107 Sum_probs=84.1
Q ss_pred hcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 528 KESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 528 ~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
...++.+|||+|||+|.++..+++..++..+|+|+|+++.+++.|++++... +...++++.++|+.+++
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----------~~~~~v~~~~~d~~~~~ 87 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDL-----------NLIDRVTLIKDGHQNMD 87 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHT-----------TCGGGEEEECSCGGGGG
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-----------CCCCCeEEEECCHHHHh
Confidence 3445789999999999999999987433469999999999999999987531 12258999999998876
Q ss_pred -CCCCCccEEEecccc-c------cCChhHHHHHHHHHHHcccCC-EEEEEe
Q 004178 608 -SRLHGFDIGTCLEVI-E------HMEEDEASQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 608 -~~d~sFDlVVc~eVL-E------HL~~d~~~~fleeI~rvLKPG-~LIIST 650 (770)
...+.||+|++...+ . ....+....+++++.++|||| .+++..
T Consensus 88 ~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 88 KYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp GTCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 455789999987654 1 011123345667899999998 666554
No 118
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.28 E-value=1.2e-11 Score=118.10 Aligned_cols=119 Identities=13% Similarity=0.043 Sum_probs=87.4
Q ss_pred HHHHHHHhh-cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEE
Q 004178 520 VEYALQHIK-ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVL 598 (770)
Q Consensus 520 ~e~Il~~L~-~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef 598 (770)
.+.+.+.+. ..++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.|++++... ....++++
T Consensus 19 ~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~-----------~~~~~~~~ 85 (177)
T 2esr_A 19 RGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRG--MSAAVLVEKNRKAQAIIQDNIIMT-----------KAENRFTL 85 (177)
T ss_dssp HHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTT--CCEEEEECCCHHHHHHHHHHHHTT-----------TCGGGEEE
T ss_pred HHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHc-----------CCCCceEE
Confidence 345555555 4567899999999999999999874 369999999999999999877421 12247999
Q ss_pred EECCccc-cCCCCCCccEEEeccccccCChhHHHHHHHHHH--HcccCC-EEEEEecCCc
Q 004178 599 FDGSITV-FDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVL--SSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 599 ~~GDaed-lp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~--rvLKPG-~LIISTPN~e 654 (770)
.++|+.+ ++.....||+|++...+++ .....+.+.+. ++|+|| .+++.++...
T Consensus 86 ~~~d~~~~~~~~~~~fD~i~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 86 LKMEAERAIDCLTGRFDLVFLDPPYAK---ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp ECSCHHHHHHHBCSCEEEEEECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred EECcHHHhHHhhcCCCCEEEECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 9999877 3434467999999866532 12234444565 899998 7777777654
No 119
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.27 E-value=1.1e-10 Score=119.17 Aligned_cols=114 Identities=12% Similarity=0.086 Sum_probs=84.6
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
++...+...++.+|||||||+|..+..|++..++..+|+|+|+++.+++.|++++... +...++++.++
T Consensus 54 ~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----------g~~~~v~~~~~ 122 (248)
T 3tfw_A 54 FLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLA-----------GVDQRVTLREG 122 (248)
T ss_dssp HHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHT-----------TCTTTEEEEES
T ss_pred HHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-----------CCCCcEEEEEc
Confidence 3333334556899999999999999999998633589999999999999999987531 12247999999
Q ss_pred Cccc-cCCC--CCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEec
Q 004178 602 SITV-FDSR--LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 602 Daed-lp~~--d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
|+.+ ++.. .+.||+|++.... .....+++.+.++|||| .+++...
T Consensus 123 d~~~~l~~~~~~~~fD~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 123 PALQSLESLGECPAFDLIFIDADK-----PNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp CHHHHHHTCCSCCCCSEEEECSCG-----GGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred CHHHHHHhcCCCCCeEEEEECCch-----HHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 9876 3322 3489999986542 23335666799999999 6666543
No 120
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.26 E-value=2e-11 Score=123.28 Aligned_cols=101 Identities=8% Similarity=-0.009 Sum_probs=77.8
Q ss_pred CCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCC-ccEEEEECCccccCC--
Q 004178 532 ATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDV-KSAVLFDGSITVFDS-- 608 (770)
Q Consensus 532 ~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~-~~Vef~~GDaedlp~-- 608 (770)
..+|||+|||+|..+..|++..++..+|+++|+++++++.|++++... +.. .++++.++|+.+...
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----------g~~~~~i~~~~gda~~~l~~~ 125 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREA-----------GYSPSRVRFLLSRPLDVMSRL 125 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHT-----------TCCGGGEEEECSCHHHHGGGS
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-----------CCCcCcEEEEEcCHHHHHHHh
Confidence 349999999999999999986434589999999999999999987531 122 479999999877532
Q ss_pred CCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEE
Q 004178 609 RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIV 648 (770)
Q Consensus 609 ~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LII 648 (770)
..+.||+|++....++ ...+.+.+.++|||| .+++
T Consensus 126 ~~~~fD~V~~d~~~~~-----~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 126 ANDSYQLVFGQVSPMD-----LKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp CTTCEEEEEECCCTTT-----HHHHHHHHHHHEEEEEEEEE
T ss_pred cCCCcCeEEEcCcHHH-----HHHHHHHHHHHcCCCcEEEE
Confidence 2578999988654433 234566799999999 5444
No 121
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.25 E-value=5.6e-11 Score=117.66 Aligned_cols=116 Identities=14% Similarity=0.047 Sum_probs=85.2
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
+++...+...++.+|||||||+|..+..+++..++..+|+|+|+++.+++.|++++... ....++++.+
T Consensus 48 ~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----------~~~~~v~~~~ 116 (223)
T 3duw_A 48 KFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERA-----------NLNDRVEVRT 116 (223)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHT-----------TCTTTEEEEE
T ss_pred HHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-----------CCCCcEEEEE
Confidence 33434444556889999999999999999998633589999999999999999887531 1224699999
Q ss_pred CCccccCCC-----CCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 601 GSITVFDSR-----LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 601 GDaedlp~~-----d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
+|+.+.... .+.||+|++....+ ....+++.+.++|||| .+++..+.
T Consensus 117 ~d~~~~~~~~~~~~~~~fD~v~~d~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 117 GLALDSLQQIENEKYEPFDFIFIDADKQ-----NNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp SCHHHHHHHHHHTTCCCCSEEEECSCGG-----GHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred cCHHHHHHHHHhcCCCCcCEEEEcCCcH-----HHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 998653221 25799999876533 2335666799999999 66665443
No 122
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.25 E-value=2.8e-11 Score=119.79 Aligned_cols=114 Identities=12% Similarity=0.007 Sum_probs=83.1
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
.++...+...++.+|||+|||+|..+..+++..++..+|+|+|+++.+++.|++++... ....++++.+
T Consensus 54 ~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----------~~~~~v~~~~ 122 (225)
T 3tr6_A 54 QLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKA-----------GLSDKIGLRL 122 (225)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHT-----------TCTTTEEEEE
T ss_pred HHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHC-----------CCCCceEEEe
Confidence 33434444456789999999999999999987533589999999999999999987531 1224699999
Q ss_pred CCccccC-CCC-----CCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEe
Q 004178 601 GSITVFD-SRL-----HGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 601 GDaedlp-~~d-----~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIST 650 (770)
+|+.+.. ... +.||+|++.... .....+.+.+.++|||| .+++..
T Consensus 123 ~d~~~~~~~~~~~~~~~~fD~v~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 123 SPAKDTLAELIHAGQAWQYDLIYIDADK-----ANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp SCHHHHHHHHHTTTCTTCEEEEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCHHHHHHHhhhccCCCCccEEEECCCH-----HHHHHHHHHHHHhcCCCcEEEEeC
Confidence 9986532 111 689999865532 23345666799999999 666543
No 123
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.25 E-value=2.2e-11 Score=124.18 Aligned_cols=121 Identities=15% Similarity=0.121 Sum_probs=87.0
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccc-cC-
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITV-FD- 607 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaed-lp- 607 (770)
.+..+|||||||+|.++..|++.. +...|+|+|+++.|++.|++++....... ..+..++.++++|+.+ ++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~------~~~~~nv~~~~~d~~~~l~~ 117 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAP------AGGFQNIACLRSNAMKHLPN 117 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHST------TCCCTTEEEEECCTTTCHHH
T ss_pred CCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHH------hcCCCeEEEEECcHHHhhhh
Confidence 356789999999999999999876 45799999999999999988764321000 1244689999999987 55
Q ss_pred -CCCCCccEEEeccccccCChhH------HHHHHHHHHHcccCC-EEEEEecCCchhH
Q 004178 608 -SRLHGFDIGTCLEVIEHMEEDE------ASQFGNIVLSSFRPR-ILIVSTPNYEYNA 657 (770)
Q Consensus 608 -~~d~sFDlVVc~eVLEHL~~d~------~~~fleeI~rvLKPG-~LIISTPN~efN~ 657 (770)
+..+.||.|++...-.|..... ...+++++.++|||| .+++.+.+..+..
T Consensus 118 ~~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~ 175 (235)
T 3ckk_A 118 FFYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHD 175 (235)
T ss_dssp HCCTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHH
T ss_pred hCCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHH
Confidence 5678999998754332221000 035677899999999 8888888865544
No 124
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.25 E-value=2.4e-11 Score=122.15 Aligned_cols=112 Identities=12% Similarity=0.138 Sum_probs=89.7
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
..+.+.+...++.+|||+|||+|.++..+++..+ .+|+|+|+++.+++.|++++.. .+..++++..
T Consensus 81 ~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~------------~~~~~v~~~~ 146 (235)
T 1jg1_A 81 AIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLER------------AGVKNVHVIL 146 (235)
T ss_dssp HHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHH------------TTCCSEEEEE
T ss_pred HHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHH------------cCCCCcEEEE
Confidence 4555666667788999999999999999998763 7899999999999999987742 2344699999
Q ss_pred CCccccCCC-CCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCch
Q 004178 601 GSITVFDSR-LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEY 655 (770)
Q Consensus 601 GDaedlp~~-d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ef 655 (770)
+|+. .+.. ...||+|++..+++|+. +.+.++|||| .+++++++...
T Consensus 147 ~d~~-~~~~~~~~fD~Ii~~~~~~~~~--------~~~~~~L~pgG~lvi~~~~~~~ 194 (235)
T 1jg1_A 147 GDGS-KGFPPKAPYDVIIVTAGAPKIP--------EPLIEQLKIGGKLIIPVGSYHL 194 (235)
T ss_dssp SCGG-GCCGGGCCEEEEEECSBBSSCC--------HHHHHTEEEEEEEEEEECSSSS
T ss_pred CCcc-cCCCCCCCccEEEECCcHHHHH--------HHHHHhcCCCcEEEEEEecCCC
Confidence 9973 3333 34599999999999998 2478899998 88888887543
No 125
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.24 E-value=1.5e-11 Score=120.21 Aligned_cols=102 Identities=20% Similarity=0.143 Sum_probs=82.2
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.|++++.. .+..++++.++|+.+..
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~------------~~~~~v~~~~~d~~~~~-- 122 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLG--AKSVLATDISDESMTAAEENAAL------------NGIYDIALQKTSLLADV-- 122 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHH------------TTCCCCEEEESSTTTTC--
T ss_pred cCCCEEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHH------------cCCCceEEEeccccccC--
Confidence 457899999999999999999875 36999999999999999987742 23334999999997754
Q ss_pred CCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 610 LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 610 d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
.+.||+|++..+++|+ ..+++++.++|||| .+++.++.
T Consensus 123 ~~~fD~i~~~~~~~~~-----~~~l~~~~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 123 DGKFDLIVANILAEIL-----LDLIPQLDSHLNEDGQVIFSGID 161 (205)
T ss_dssp CSCEEEEEEESCHHHH-----HHHGGGSGGGEEEEEEEEEEEEE
T ss_pred CCCceEEEECCcHHHH-----HHHHHHHHHhcCCCCEEEEEecC
Confidence 4789999999888765 35666799999998 66665433
No 126
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.24 E-value=2.2e-11 Score=120.91 Aligned_cols=116 Identities=14% Similarity=0.173 Sum_probs=88.2
Q ss_pred HHHHHh--hcCCCCEEEEEcCccchHHHHHhcCCC----CCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCcc
Q 004178 522 YALQHI--KESCATTLVDFGCGSGSLLDSLLDYPT----ALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKS 595 (770)
Q Consensus 522 ~Il~~L--~~~~~~rVLDIGCGtG~ll~~LAk~gg----p~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~ 595 (770)
.+++.+ ...++.+|||+|||+|.++..+++..+ +..+|+|+|+++.+++.|++++....-. .....+
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-------~~~~~~ 141 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPE-------LLKIDN 141 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGG-------GGSSTT
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCcc-------ccccCC
Confidence 334444 345678999999999999999998763 3469999999999999999887532100 001357
Q ss_pred EEEEECCccccC----CCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 596 AVLFDGSITVFD----SRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 596 Vef~~GDaedlp----~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
+++..+|+.+.. ...+.||+|++...++|+. +.+.++|||| .+++.++.
T Consensus 142 v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 142 FKIIHKNIYQVNEEEKKELGLFDAIHVGASASELP--------EILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp EEEEECCGGGCCHHHHHHHCCEEEEEECSBBSSCC--------HHHHHHEEEEEEEEEEEEE
T ss_pred EEEEECChHhcccccCccCCCcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEEcc
Confidence 999999998765 4457899999999999886 4578899998 77776664
No 127
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.24 E-value=3.9e-11 Score=127.71 Aligned_cols=106 Identities=18% Similarity=0.072 Sum_probs=82.1
Q ss_pred HHhhcCCCCEEEEEcCccchHH-HHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCc
Q 004178 525 QHIKESCATTLVDFGCGSGSLL-DSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSI 603 (770)
Q Consensus 525 ~~L~~~~~~rVLDIGCGtG~ll-~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDa 603 (770)
..+...++.+|||||||+|.++ ..+++.. ..+|+|+|++++|++.|++++... +..++++.++|+
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~--ga~V~gIDis~~~l~~Ar~~~~~~------------gl~~v~~v~gDa 181 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVY--GMRVNVVEIEPDIAELSRKVIEGL------------GVDGVNVITGDE 181 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTT--CCEEEEEESSHHHHHHHHHHHHHH------------TCCSEEEEESCG
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHhc------------CCCCeEEEECch
Confidence 4556778999999999999765 4455543 389999999999999999987532 226899999999
Q ss_pred cccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEec
Q 004178 604 TVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 604 edlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
.+++ +++||+|++... ++ +...+.+++.++|||| .+++...
T Consensus 182 ~~l~--d~~FDvV~~~a~---~~--d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 182 TVID--GLEFDVLMVAAL---AE--PKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp GGGG--GCCCSEEEECTT---CS--CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred hhCC--CCCcCEEEECCC---cc--CHHHHHHHHHHHcCCCcEEEEEcC
Confidence 9876 589999998655 23 3445666799999999 7776553
No 128
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.24 E-value=3.4e-11 Score=119.53 Aligned_cols=110 Identities=14% Similarity=0.143 Sum_probs=85.8
Q ss_pred cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC
Q 004178 529 ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS 608 (770)
Q Consensus 529 ~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~ 608 (770)
..++.+|||+|||+|.++..+++..++..+|+|+|+++.+++.|++++...... .....++++.++|+.....
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-------~~~~~~v~~~~~d~~~~~~ 147 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPT-------LLSSGRVQLVVGDGRMGYA 147 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTH-------HHHTSSEEEEESCGGGCCG
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc-------ccCCCcEEEEECCcccCcc
Confidence 456789999999999999999876434469999999999999999877431000 0012479999999987665
Q ss_pred CCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 609 RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 609 ~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
..+.||+|++...++|+. +++.++|||| .++++++..
T Consensus 148 ~~~~fD~i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 148 EEAPYDAIHVGAAAPVVP--------QALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp GGCCEEEEEECSBBSSCC--------HHHHHTEEEEEEEEEEESCT
T ss_pred cCCCcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEEecC
Confidence 567899999999999887 3578899998 777776653
No 129
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.24 E-value=2.9e-11 Score=121.76 Aligned_cols=157 Identities=15% Similarity=0.079 Sum_probs=104.9
Q ss_pred HHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEE
Q 004178 520 VEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLF 599 (770)
Q Consensus 520 ~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~ 599 (770)
..++...+...++.+|||+|||+|..+..+++..++..+|+|+|+++.+++.|++++... ....++++.
T Consensus 49 ~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----------g~~~~v~~~ 117 (239)
T 2hnk_A 49 GQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKEN-----------GLENKIFLK 117 (239)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT-----------TCGGGEEEE
T ss_pred HHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-----------CCCCCEEEE
Confidence 344444455556889999999999999999987533479999999999999999887531 122359999
Q ss_pred ECCcccc-C--------------CC-C-CCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhh
Q 004178 600 DGSITVF-D--------------SR-L-HGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQK 661 (770)
Q Consensus 600 ~GDaedl-p--------------~~-d-~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~ 661 (770)
++|+.+. + +. . +.||+|++....++. ..+++.+.++|+|| .+++.+... ..
T Consensus 118 ~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~-----~~~l~~~~~~L~pgG~lv~~~~~~------~g 186 (239)
T 2hnk_A 118 LGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENY-----PNYYPLILKLLKPGGLLIADNVLW------DG 186 (239)
T ss_dssp ESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGH-----HHHHHHHHHHEEEEEEEEEECSSG------GG
T ss_pred ECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHHH-----HHHHHHHHHHcCCCeEEEEEcccc------CC
Confidence 9998653 2 11 2 689999988654433 35566799999999 666543321 11
Q ss_pred hccccCCCCCchhhhhccccccCCCcccccCHHHHHHHHHHHHHHCCcEEEEEeeeC
Q 004178 662 SSSTIQEDDPDEKTQLQSCKFRNHDHKFEWTRDQFNCWATELAARHNYSVEFSGVGG 718 (770)
Q Consensus 662 ~~~~g~~e~pde~~~~~~~~fRh~DHkfewTreEF~~Wa~~La~r~GY~VEF~GvG~ 718 (770)
. ...+.+. ......++.+...+.....+.+.+..+|+
T Consensus 187 ~-------------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 223 (239)
T 2hnk_A 187 S-------------------VADLSHQ-EPSTVGIRKFNELVYNDSLVDVSLVPIAD 223 (239)
T ss_dssp G-------------------GGCTTCC-CHHHHHHHHHHHHHHHCTTEEEEEECSTT
T ss_pred c-------------------ccCcccc-chHHHHHHHHHHHHhhCCCeEEEEEEcCC
Confidence 0 0011111 12344455566566666688888887775
No 130
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.23 E-value=9e-12 Score=117.02 Aligned_cols=114 Identities=11% Similarity=0.051 Sum_probs=83.4
Q ss_pred HHHHHHhhcC--CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEE
Q 004178 521 EYALQHIKES--CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVL 598 (770)
Q Consensus 521 e~Il~~L~~~--~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef 598 (770)
+.+.+.+... ++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++... +. ++++
T Consensus 29 ~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~------------~~-~~~~ 92 (171)
T 1ws6_A 29 KALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEG---WEAVLVEKDPEAVRLLKENVRRT------------GL-GARV 92 (171)
T ss_dssp HHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTT---CEEEEECCCHHHHHHHHHHHHHH------------TC-CCEE
T ss_pred HHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHHc------------CC-ceEE
Confidence 3444444432 67899999999999999999987 45999999999999999877431 22 7899
Q ss_pred EECCcccc-CC---CCCCccEEEeccccccCChhHHHHHHHHHH--HcccCC-EEEEEecCCc
Q 004178 599 FDGSITVF-DS---RLHGFDIGTCLEVIEHMEEDEASQFGNIVL--SSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 599 ~~GDaedl-p~---~d~sFDlVVc~eVLEHL~~d~~~~fleeI~--rvLKPG-~LIISTPN~e 654 (770)
.++|+.+. +. ....||+|++...++...+ .+.+.+. ++|||| .+++.++...
T Consensus 93 ~~~d~~~~~~~~~~~~~~~D~i~~~~~~~~~~~----~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 93 VALPVEVFLPEAKAQGERFTVAFMAPPYAMDLA----ALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp ECSCHHHHHHHHHHTTCCEEEEEECCCTTSCTT----HHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred EeccHHHHHHhhhccCCceEEEEECCCCchhHH----HHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 99998763 21 1347999999877652221 2233455 999998 7778877754
No 131
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.23 E-value=3.3e-11 Score=119.97 Aligned_cols=122 Identities=7% Similarity=0.093 Sum_probs=88.7
Q ss_pred hHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCC
Q 004178 514 PLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDV 593 (770)
Q Consensus 514 PL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~ 593 (770)
.+.+...+++...+...++.+|||+|||+|..+..+++..++..+|+|+|+++.+++.|++++... ...
T Consensus 41 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----------~~~ 109 (221)
T 3u81_A 41 NVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFA-----------GLQ 109 (221)
T ss_dssp GCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH-----------TCG
T ss_pred ccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHc-----------CCC
Confidence 333444445555555567899999999999999999986534589999999999999999987532 122
Q ss_pred ccEEEEECCcccc-CCCC-----CCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEE
Q 004178 594 KSAVLFDGSITVF-DSRL-----HGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVS 649 (770)
Q Consensus 594 ~~Vef~~GDaedl-p~~d-----~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIS 649 (770)
.+++++++|+.+. +... +.||+|++....++.. +.. .+.+.+ ++|||| .+++.
T Consensus 110 ~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~-~~~-~~~~~~-~~LkpgG~lv~~ 169 (221)
T 3u81_A 110 DKVTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKDRYL-PDT-LLLEKC-GLLRKGTVLLAD 169 (221)
T ss_dssp GGEEEEESCHHHHGGGTTTTSCCCCCSEEEECSCGGGHH-HHH-HHHHHT-TCCCTTCEEEES
T ss_pred CceEEEECCHHHHHHHHHHhcCCCceEEEEEcCCcccch-HHH-HHHHhc-cccCCCeEEEEe
Confidence 4699999998653 2222 6899999988777765 333 344445 999999 66653
No 132
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.23 E-value=4.1e-11 Score=128.86 Aligned_cols=106 Identities=17% Similarity=0.124 Sum_probs=83.4
Q ss_pred hcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 528 KESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 528 ~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
...++.+|||+|||+|.++..+++.+ ..+|+|+|+|+ |++.|++++... ....+++++++|+++++
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~g--~~~v~gvD~s~-~l~~a~~~~~~~-----------~~~~~v~~~~~d~~~~~ 128 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKAG--ARKVIGIECSS-ISDYAVKIVKAN-----------KLDHVVTIIKGKVEEVE 128 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHTT--CSEEEEEECST-HHHHHHHHHHHT-----------TCTTTEEEEESCTTTCC
T ss_pred ccCCCCEEEEEeccchHHHHHHHHCC--CCEEEEECcHH-HHHHHHHHHHHc-----------CCCCcEEEEECcHHHcc
Confidence 44568999999999999999999985 26999999995 999999877531 22345999999999998
Q ss_pred CCCCCccEEEeccccccCC-hhHHHHHHHHHHHcccCCEEE
Q 004178 608 SRLHGFDIGTCLEVIEHME-EDEASQFGNIVLSSFRPRILI 647 (770)
Q Consensus 608 ~~d~sFDlVVc~eVLEHL~-~d~~~~fleeI~rvLKPG~LI 647 (770)
.+++.||+|++..+.+++. .+....+++.+.++||||.++
T Consensus 129 ~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~l 169 (349)
T 3q7e_A 129 LPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLI 169 (349)
T ss_dssp CSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEE
T ss_pred CCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEE
Confidence 8788999999976654442 234556777789999999433
No 133
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.23 E-value=2.5e-11 Score=115.91 Aligned_cols=120 Identities=12% Similarity=0.003 Sum_probs=87.1
Q ss_pred HHHHHHHHhh-cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEE
Q 004178 519 RVEYALQHIK-ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAV 597 (770)
Q Consensus 519 R~e~Il~~L~-~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Ve 597 (770)
..+.+.+.+. ..++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.|++++... ....+++
T Consensus 31 ~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~-----------~~~~~~~ 97 (187)
T 2fhp_A 31 VKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRG--MDKSICIEKNFAALKVIKENIAIT-----------KEPEKFE 97 (187)
T ss_dssp HHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHH-----------TCGGGEE
T ss_pred HHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHh-----------CCCcceE
Confidence 3445555553 3467899999999999999888764 369999999999999999877532 1124799
Q ss_pred EEECCccccCC----CCCCccEEEeccccccCChhHHHHHHHHH--HHcccCC-EEEEEecCCc
Q 004178 598 LFDGSITVFDS----RLHGFDIGTCLEVIEHMEEDEASQFGNIV--LSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 598 f~~GDaedlp~----~d~sFDlVVc~eVLEHL~~d~~~~fleeI--~rvLKPG-~LIISTPN~e 654 (770)
++++|+.+... ....||+|++...+++... ..+.+.+ .++|+|| .+++.+++..
T Consensus 98 ~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~~~~~---~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 98 VRKMDANRALEQFYEEKLQFDLVLLDPPYAKQEI---VSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp EEESCHHHHHHHHHHTTCCEEEEEECCCGGGCCH---HHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred EEECcHHHHHHHHHhcCCCCCEEEECCCCCchhH---HHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 99999877432 2578999999877543321 2233345 8899998 7778777753
No 134
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.22 E-value=6.5e-11 Score=129.51 Aligned_cols=114 Identities=20% Similarity=0.264 Sum_probs=90.8
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
.++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++.. .+ .+++++++|+.+....
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g---~~V~gvDis~~al~~A~~n~~~------------~~-~~v~~~~~D~~~~~~~ 295 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMG---AEVVGVEDDLASVLSLQKGLEA------------NA-LKAQALHSDVDEALTE 295 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTT---CEEEEEESBHHHHHHHHHHHHH------------TT-CCCEEEECSTTTTSCT
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHH------------cC-CCeEEEEcchhhcccc
Confidence 357899999999999999999986 7999999999999999998742 12 2489999999988776
Q ss_pred CCCccEEEecccccc---CChhHHHHHHHHHHHcccCC-EEEEEec-CCchhHHH
Q 004178 610 LHGFDIGTCLEVIEH---MEEDEASQFGNIVLSSFRPR-ILIVSTP-NYEYNAIL 659 (770)
Q Consensus 610 d~sFDlVVc~eVLEH---L~~d~~~~fleeI~rvLKPG-~LIISTP-N~efN~lf 659 (770)
++.||+|++...++| ...+....+++++.++|||| .+++.++ ...+...+
T Consensus 296 ~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l 350 (381)
T 3dmg_A 296 EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLL 350 (381)
T ss_dssp TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHH
T ss_pred CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHH
Confidence 789999999999988 33356667778899999998 5555443 33444333
No 135
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.22 E-value=4.3e-11 Score=128.52 Aligned_cols=115 Identities=17% Similarity=0.143 Sum_probs=89.1
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+++ +++.|++++... +...+++++.
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g--~~~V~~vD~s~-~~~~a~~~~~~~-----------~l~~~v~~~~ 105 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKSN-----------NLTDRIVVIP 105 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-HHHHHHHHHHHT-----------TCTTTEEEEE
T ss_pred HHHHhccccCCcCEEEEcCCCccHHHHHHHhCC--CCEEEEECCHH-HHHHHHHHHHHc-----------CCCCcEEEEE
Confidence 345555666678999999999999999999875 26999999996 889898876421 1225799999
Q ss_pred CCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEe
Q 004178 601 GSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 601 GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIST 650 (770)
+|+.+++.+ +.||+|++..+++|+..+........+.++|||| .+++..
T Consensus 106 ~d~~~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 106 GKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp SCTTTCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred cchhhCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 999987654 6899999999999887554444444689999999 555443
No 136
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.22 E-value=2.7e-11 Score=125.07 Aligned_cols=120 Identities=15% Similarity=0.190 Sum_probs=85.6
Q ss_pred hHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCC-C
Q 004178 514 PLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCT-D 592 (770)
Q Consensus 514 PL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~-~ 592 (770)
.+++...+.+++.+...++.+|||+|||+|.++..+++...+..+|+|+|+++.+++.|++++.. . +
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~------------~~g 160 (275)
T 1yb2_A 93 IISEIDASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSE------------FYD 160 (275)
T ss_dssp -------------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHT------------TSC
T ss_pred ccChhhHHHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHh------------cCC
Confidence 34444445677777777889999999999999999998622347999999999999999987742 2 3
Q ss_pred CccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 593 VKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 593 ~~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
..++++.++|+.+ +..++.||+|++ |++ +. ..+++++.++|||| .+++.+|+.
T Consensus 161 ~~~v~~~~~d~~~-~~~~~~fD~Vi~-----~~~-~~-~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 161 IGNVRTSRSDIAD-FISDQMYDAVIA-----DIP-DP-WNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp CTTEEEECSCTTT-CCCSCCEEEEEE-----CCS-CG-GGSHHHHHHTEEEEEEEEEEESSH
T ss_pred CCcEEEEECchhc-cCcCCCccEEEE-----cCc-CH-HHHHHHHHHHcCCCCEEEEEeCCH
Confidence 4579999999987 444578999998 555 22 24556799999998 888888774
No 137
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.22 E-value=5.5e-11 Score=122.54 Aligned_cols=120 Identities=10% Similarity=0.062 Sum_probs=93.0
Q ss_pred hHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCC
Q 004178 514 PLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDV 593 (770)
Q Consensus 514 PL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~ 593 (770)
+++++....++..+...++.+|||+|||+|.++..+++..++..+|+|+|+++.+++.|++++... ...
T Consensus 95 ~~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----------~~~ 163 (277)
T 1o54_A 95 IVYPKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKW-----------GLI 163 (277)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHT-----------TCG
T ss_pred ccCHHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc-----------CCC
Confidence 455566667778888788899999999999999999987334589999999999999999877431 112
Q ss_pred ccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 594 KSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 594 ~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
.++++..+|+.+. ...+.||+|++ +++ +.. .+++++.++|+|| .+++.+|.
T Consensus 164 ~~v~~~~~d~~~~-~~~~~~D~V~~-----~~~-~~~-~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 164 ERVTIKVRDISEG-FDEKDVDALFL-----DVP-DPW-NYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp GGEEEECCCGGGC-CSCCSEEEEEE-----CCS-CGG-GTHHHHHHHEEEEEEEEEEESS
T ss_pred CCEEEEECCHHHc-ccCCccCEEEE-----CCc-CHH-HHHHHHHHHcCCCCEEEEEeCC
Confidence 5799999999876 44568999988 333 222 4455799999998 77777765
No 138
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.22 E-value=9.2e-11 Score=125.83 Aligned_cols=111 Identities=18% Similarity=0.163 Sum_probs=86.4
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
+++.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+++ |++.|++++... ....++++++
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g--~~~v~gvD~s~-~~~~a~~~~~~~-----------~~~~~i~~~~ 119 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAG--AKKVLGVDQSE-ILYQAMDIIRLN-----------KLEDTITLIK 119 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEESST-HHHHHHHHHHHT-----------TCTTTEEEEE
T ss_pred HHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcC--CCEEEEEChHH-HHHHHHHHHHHc-----------CCCCcEEEEE
Confidence 445555556678999999999999999999885 25999999997 999998877431 1225899999
Q ss_pred CCccccCCCCCCccEEEeccc---cccCChhHHHHHHHHHHHcccCC-EEE
Q 004178 601 GSITVFDSRLHGFDIGTCLEV---IEHMEEDEASQFGNIVLSSFRPR-ILI 647 (770)
Q Consensus 601 GDaedlp~~d~sFDlVVc~eV---LEHL~~d~~~~fleeI~rvLKPG-~LI 647 (770)
+|+.+++.+++.||+|++..+ +.|.. ....++..+.++|||| .++
T Consensus 120 ~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~--~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 120 GKIEEVHLPVEKVDVIISEWMGYFLLFES--MLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCTTTSCCSCSCEEEEEECCCBTTBTTTC--HHHHHHHHHHHHEEEEEEEE
T ss_pred eeHHHhcCCCCcEEEEEEcCchhhccCHH--HHHHHHHHHHhhcCCCcEEE
Confidence 999998877789999999763 44443 4456667799999999 443
No 139
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.21 E-value=2.7e-11 Score=119.77 Aligned_cols=115 Identities=10% Similarity=0.046 Sum_probs=83.7
Q ss_pred HHHHHHhhcC-CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEE
Q 004178 521 EYALQHIKES-CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLF 599 (770)
Q Consensus 521 e~Il~~L~~~-~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~ 599 (770)
+.+.+.+... ++.+|||+|||+|.++..++..+. .+|+|+|+|+.|++.|++++.. .+..++++.
T Consensus 43 ~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~--~~V~~vD~s~~~l~~a~~~~~~------------~~~~~v~~~ 108 (202)
T 2fpo_A 43 ETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYA--AGATLIEMDRAVSQQLIKNLAT------------LKAGNARVV 108 (202)
T ss_dssp HHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHH------------TTCCSEEEE
T ss_pred HHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCC--CEEEEEECCHHHHHHHHHHHHH------------cCCCcEEEE
Confidence 3444444432 578999999999999998776652 5999999999999999988753 233589999
Q ss_pred ECCccc-cCCCCCCccEEEeccccccCChhHHHHHHHHHHH--cccCC-EEEEEecC
Q 004178 600 DGSITV-FDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLS--SFRPR-ILIVSTPN 652 (770)
Q Consensus 600 ~GDaed-lp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~r--vLKPG-~LIISTPN 652 (770)
++|+.+ ++...+.||+|++...++ .. ....+.+.+.+ +|+|| .+++.+..
T Consensus 109 ~~D~~~~~~~~~~~fD~V~~~~p~~-~~--~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 109 NSNAMSFLAQKGTPHNIVFVDPPFR-RG--LLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp CSCHHHHHSSCCCCEEEEEECCSSS-TT--THHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred ECCHHHHHhhcCCCCCEEEECCCCC-CC--cHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 999887 455567899999987743 32 22344445654 59998 67676654
No 140
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.21 E-value=5.2e-11 Score=119.20 Aligned_cols=104 Identities=11% Similarity=0.103 Sum_probs=77.4
Q ss_pred hcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc-
Q 004178 528 KESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF- 606 (770)
Q Consensus 528 ~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl- 606 (770)
...++.+|||+|||+|.++..+++..+ ..+|+|+|+|+.|++.+.+.... ..++.+..+|+...
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~--------------~~~v~~~~~d~~~~~ 118 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRE--------------RNNIIPLLFDASKPW 118 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHH--------------CSSEEEECSCTTCGG
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhc--------------CCCeEEEEcCCCCch
Confidence 345678999999999999999988763 47999999999988766554321 13688999998774
Q ss_pred ---CCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEec
Q 004178 607 ---DSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 607 ---p~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
+. .+.||+|+|. +.++ ++...+++++.++|||| .+++..+
T Consensus 119 ~~~~~-~~~fD~V~~~-~~~~---~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 119 KYSGI-VEKVDLIYQD-IAQK---NQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp GTTTT-CCCEEEEEEC-CCST---THHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhccc-ccceeEEEEe-ccCh---hHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 33 3789999997 2222 34445567899999998 6666643
No 141
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.21 E-value=2.8e-11 Score=122.24 Aligned_cols=100 Identities=17% Similarity=0.231 Sum_probs=79.1
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
.++.+|||+|||+|.++..|+... +..+|+|+|+|+.|++.|++++... +..+++++++|+.+++..
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~------------~~~~v~~~~~d~~~~~~~ 135 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEAL------------QLENTTFCHDRAETFGQR 135 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHH------------TCSSEEEEESCHHHHTTC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHc------------CCCCEEEEeccHHHhccc
Confidence 357899999999999999998533 3379999999999999999876431 334699999999887753
Q ss_pred ---CCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEE
Q 004178 610 ---LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIV 648 (770)
Q Consensus 610 ---d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LII 648 (770)
.+.||+|+|..+ . ....+.+.+.++|||| .+++
T Consensus 136 ~~~~~~fD~V~~~~~----~--~~~~~l~~~~~~LkpgG~l~~ 172 (240)
T 1xdz_A 136 KDVRESYDIVTARAV----A--RLSVLSELCLPLVKKNGLFVA 172 (240)
T ss_dssp TTTTTCEEEEEEECC----S--CHHHHHHHHGGGEEEEEEEEE
T ss_pred ccccCCccEEEEecc----C--CHHHHHHHHHHhcCCCCEEEE
Confidence 578999999773 2 2446667899999999 5544
No 142
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.20 E-value=1.2e-10 Score=120.21 Aligned_cols=124 Identities=15% Similarity=0.124 Sum_probs=92.7
Q ss_pred hHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCC
Q 004178 514 PLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDV 593 (770)
Q Consensus 514 PL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~ 593 (770)
|-....++.+++.+. .++.+|||+|||+|.++..+++.. +..+|+|+|+|+.+++.|++++... +.
T Consensus 93 ~~te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~------------~~ 158 (276)
T 2b3t_A 93 PDTECLVEQALARLP-EQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHL------------AI 158 (276)
T ss_dssp TTHHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHH------------TC
T ss_pred chHHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHc------------CC
Confidence 444445556666654 457899999999999999998654 3479999999999999999887532 23
Q ss_pred ccEEEEECCccccCCCCCCccEEEec-------------cccccCCh----------hHHHHHHHHHHHcccCC-EEEEE
Q 004178 594 KSAVLFDGSITVFDSRLHGFDIGTCL-------------EVIEHMEE----------DEASQFGNIVLSSFRPR-ILIVS 649 (770)
Q Consensus 594 ~~Vef~~GDaedlp~~d~sFDlVVc~-------------eVLEHL~~----------d~~~~fleeI~rvLKPG-~LIIS 649 (770)
.++++.++|+.+.. ..+.||+|++. ++++|-+. +....+++.+.++|||| .+++.
T Consensus 159 ~~v~~~~~d~~~~~-~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 159 KNIHILQSDWFSAL-AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp CSEEEECCSTTGGG-TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CceEEEEcchhhhc-ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 47999999997743 25789999997 45555441 23466777899999998 66666
Q ss_pred ecC
Q 004178 650 TPN 652 (770)
Q Consensus 650 TPN 652 (770)
.+.
T Consensus 238 ~~~ 240 (276)
T 2b3t_A 238 HGW 240 (276)
T ss_dssp CCS
T ss_pred ECc
Confidence 544
No 143
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.20 E-value=9.9e-11 Score=119.65 Aligned_cols=119 Identities=13% Similarity=0.055 Sum_probs=87.9
Q ss_pred HHHHhhcC-CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 523 ALQHIKES-CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 523 Il~~L~~~-~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
+...+... ++.+|||+|||+|.++..+++.++ .+|+|+|+++.+++.|++++... ....+++++++
T Consensus 40 l~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~-----------~~~~~v~~~~~ 106 (259)
T 3lpm_A 40 LAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYN-----------QLEDQIEIIEY 106 (259)
T ss_dssp HHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHT-----------TCTTTEEEECS
T ss_pred HHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHC-----------CCcccEEEEEC
Confidence 44455555 688999999999999999999863 49999999999999999987531 12246999999
Q ss_pred CccccCC--CCCCccEEEeccccccC------------------ChhHHHHHHHHHHHcccCC-EEEEEecCCc
Q 004178 602 SITVFDS--RLHGFDIGTCLEVIEHM------------------EEDEASQFGNIVLSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 602 Daedlp~--~d~sFDlVVc~eVLEHL------------------~~d~~~~fleeI~rvLKPG-~LIISTPN~e 654 (770)
|+.+... ..+.||+|++.-.+.+. .......+++.+.++|||| .+++..+...
T Consensus 107 D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 180 (259)
T 3lpm_A 107 DLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPER 180 (259)
T ss_dssp CGGGGGGTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTT
T ss_pred cHHHhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHH
Confidence 9988763 36789999996433222 1133456778899999998 6666555433
No 144
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.20 E-value=6e-11 Score=115.70 Aligned_cols=99 Identities=11% Similarity=0.020 Sum_probs=78.4
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCCC
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSRL 610 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~d 610 (770)
++.+|||+|||+|.++..+++.. +..+|+|+|+++.+++.|++++.. .+..++++.++|+.+.+ ..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~------------~~~~~v~~~~~d~~~~~-~~ 130 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHE------------LKLENIEPVQSRVEEFP-SE 130 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHH------------TTCSSEEEEECCTTTSC-CC
T ss_pred CCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHH------------cCCCCeEEEecchhhCC-cc
Confidence 47899999999999999999864 347999999999999999987742 23346999999998876 34
Q ss_pred CCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEE
Q 004178 611 HGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVS 649 (770)
Q Consensus 611 ~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIS 649 (770)
+.||+|++..+ ++ ...+.+.+.++|+|| .+++.
T Consensus 131 ~~~D~i~~~~~-~~-----~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 131 PPFDGVISRAF-AS-----LNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp SCEEEEECSCS-SS-----HHHHHHHHTTSEEEEEEEEEE
T ss_pred CCcCEEEEecc-CC-----HHHHHHHHHHhcCCCcEEEEE
Confidence 78999998653 22 346667799999998 55554
No 145
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.19 E-value=6.7e-11 Score=126.75 Aligned_cols=130 Identities=12% Similarity=-0.013 Sum_probs=100.0
Q ss_pred CchHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCC
Q 004178 512 SPPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCT 591 (770)
Q Consensus 512 ~PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~ 591 (770)
..|+.+.....++......++.+|||+|||+|.++..++...++..+|+|+|+++.+++.|++++.. .
T Consensus 184 ~a~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~------------~ 251 (354)
T 3tma_A 184 RGSLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALA------------S 251 (354)
T ss_dssp SCSCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHH------------T
T ss_pred CCCcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHH------------c
Confidence 3456665566677777777788999999999999999988653457999999999999999998753 2
Q ss_pred CCccEEEEECCccccCCCCCCccEEEeccccccCCh------hHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 592 DVKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEE------DEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 592 ~~~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~------d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
+..++++.++|+.+++.....||+|++.-....... +....+.+.+.++|||| .+++.|++.
T Consensus 252 g~~~i~~~~~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~ 320 (354)
T 3tma_A 252 GLSWIRFLRADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP 320 (354)
T ss_dssp TCTTCEEEECCGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH
T ss_pred CCCceEEEeCChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 333899999999998877778999999543322110 12256777899999998 888888885
No 146
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.19 E-value=8.2e-11 Score=128.30 Aligned_cols=121 Identities=17% Similarity=0.271 Sum_probs=90.7
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
+++++.+....+.+|||+|||+|.++..+++.. +..+|+|+|+|+.+++.|++++....- ....+++|..
T Consensus 212 ~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl---------~~~~~v~~~~ 281 (375)
T 4dcm_A 212 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMP---------EALDRCEFMI 281 (375)
T ss_dssp HHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCG---------GGGGGEEEEE
T ss_pred HHHHHhCcccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCC---------CcCceEEEEe
Confidence 355677776667899999999999999999885 458999999999999999998753210 0123689999
Q ss_pred CCccccCCCCCCccEEEecccccc---CChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 601 GSITVFDSRLHGFDIGTCLEVIEH---MEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 601 GDaedlp~~d~sFDlVVc~eVLEH---L~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
+|+.+ +...+.||+|+|.-.+++ +.......+++++.++|||| .+++..+.
T Consensus 282 ~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 282 NNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp CSTTT-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred chhhc-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 99987 345578999999988875 33344456777899999998 55554443
No 147
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.19 E-value=6e-11 Score=126.67 Aligned_cols=113 Identities=11% Similarity=0.083 Sum_probs=84.5
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
.+++.+...+..+|||||||+|.++..+++.. +..+++++|+ +.++. ++++.. .....++++..+
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~--~~~~~~-----------~~~~~~v~~~~~ 239 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDR-AEVVA--RHRLDA-----------PDVAGRWKVVEG 239 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEEC-HHHHT--TCCCCC-----------GGGTTSEEEEEC
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHC-CCCEEEEecC-HHHhh--cccccc-----------cCCCCCeEEEec
Confidence 34455555667899999999999999999876 4578999999 44544 221110 112357999999
Q ss_pred CccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 602 SITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 602 Daedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
|+.+ +.+ +||+|++..++||+++++...++++++++|||| .++|..+.
T Consensus 240 d~~~-~~p--~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 240 DFLR-EVP--HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp CTTT-CCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECC
T ss_pred CCCC-CCC--CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 9962 222 899999999999999776677888899999998 77776543
No 148
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.19 E-value=8.7e-11 Score=127.65 Aligned_cols=113 Identities=14% Similarity=0.107 Sum_probs=87.0
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
+++.+.+...++.+|||||||+|.++..+++.+. .+|+|+|+| .|++.|++++... ....++++++
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~--~~V~gvD~s-~~~~~a~~~~~~~-----------~~~~~v~~~~ 118 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGA--RKVYAVEAT-KMADHARALVKAN-----------NLDHIVEVIE 118 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTC--SEEEEEESS-TTHHHHHHHHHHT-----------TCTTTEEEEE
T ss_pred HHHHhccccCCCCEEEEeccCcCHHHHHHHhcCC--CEEEEEccH-HHHHHHHHHHHHc-----------CCCCeEEEEE
Confidence 3344444556789999999999999999999862 599999999 9999999877531 2234699999
Q ss_pred CCccccCCCCCCccEEEeccccccCCh-hHHHHHHHHHHHcccCC-EEEE
Q 004178 601 GSITVFDSRLHGFDIGTCLEVIEHMEE-DEASQFGNIVLSSFRPR-ILIV 648 (770)
Q Consensus 601 GDaedlp~~d~sFDlVVc~eVLEHL~~-d~~~~fleeI~rvLKPG-~LII 648 (770)
+|+++++.+ +.||+|++..+.+++.. .....+++.+.++|||| .+++
T Consensus 119 ~d~~~~~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 119 GSVEDISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp SCGGGCCCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEES
T ss_pred CchhhcCcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEE
Confidence 999998876 89999999665555542 33556777799999999 4443
No 149
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.18 E-value=5e-11 Score=132.12 Aligned_cols=129 Identities=13% Similarity=0.075 Sum_probs=94.6
Q ss_pred CCchHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhh---hhcccccC
Q 004178 511 FSPPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSK---LSKKLDAA 587 (770)
Q Consensus 511 F~PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~---~s~~~~~l 587 (770)
.|.++....+..+++.+...++.+|||||||+|.++..++...+ ..+|+|||+++.+++.|++++... ....
T Consensus 153 vYGEt~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~---- 227 (438)
T 3uwp_A 153 VYGETSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWY---- 227 (438)
T ss_dssp GGGGTHHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHH----
T ss_pred ccCCCCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHh----
Confidence 34456666777788888888899999999999999999986542 346999999999999998754321 1100
Q ss_pred CCCCCCccEEEEECCccccCCCC--CCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEE
Q 004178 588 VPCTDVKSAVLFDGSITVFDSRL--HGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVS 649 (770)
Q Consensus 588 ~pr~~~~~Vef~~GDaedlp~~d--~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIS 649 (770)
.-...+|+|++||+.++++.+ ..||+|++..++ | .++....+. +++++|||| .++++
T Consensus 228 --Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~-F-~pdl~~aL~-Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 228 --GKKHAEYTLERGDFLSEEWRERIANTSVIFVNNFA-F-GPEVDHQLK-ERFANMKEGGRIVSS 287 (438)
T ss_dssp --TBCCCEEEEEECCTTSHHHHHHHHTCSEEEECCTT-C-CHHHHHHHH-HHHTTSCTTCEEEES
T ss_pred --CCCCCCeEEEECcccCCccccccCCccEEEEcccc-c-CchHHHHHH-HHHHcCCCCcEEEEe
Confidence 001258999999999887643 479999998776 3 335555554 699999999 55554
No 150
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.18 E-value=4.6e-11 Score=125.45 Aligned_cols=118 Identities=13% Similarity=0.080 Sum_probs=83.0
Q ss_pred CCCEEEEEcCccch----HHHHHhcCCCC---CceEEEEeCChHHHHHHHHHHhhhhh--c--------ccccCCCC-CC
Q 004178 531 CATTLVDFGCGSGS----LLDSLLDYPTA---LEKIVGVDISQKSLSRAAKIIHSKLS--K--------KLDAAVPC-TD 592 (770)
Q Consensus 531 ~~~rVLDIGCGtG~----ll~~LAk~ggp---~~~VvGVDISeemLe~ArkrL~~~~s--~--------~~~~l~pr-~~ 592 (770)
++.+|||+|||+|. ++..|++..+. ..+|+|+|+|+.||+.|++.+..... . +-....+. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 55556554211 25899999999999999885411000 0 00000000 00
Q ss_pred --------CccEEEEECCccccCCC-CCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEE
Q 004178 593 --------VKSAVLFDGSITVFDSR-LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIV 648 (770)
Q Consensus 593 --------~~~Vef~~GDaedlp~~-d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LII 648 (770)
..+|+|.++|+.+.+++ .+.||+|+|.+|++|++++....+.+.+++.|+|| .+++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 13699999999886544 57899999999999999777778888899999999 5544
No 151
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.18 E-value=7.4e-11 Score=118.34 Aligned_cols=105 Identities=8% Similarity=0.102 Sum_probs=80.9
Q ss_pred HHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCc
Q 004178 524 LQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSI 603 (770)
Q Consensus 524 l~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDa 603 (770)
++.+...++.+|||+|||+|.++..|++..+ ..+|+|+|+++.+++.|++++. .. .++.+..+|+
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~-------------~~-~~v~~~~~d~ 131 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACA-------------ER-ENIIPILGDA 131 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTT-------------TC-TTEEEEECCT
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhh-------------cC-CCeEEEECCC
Confidence 3334445678999999999999999998753 4799999999999999988652 12 5899999999
Q ss_pred cc----cCCCCCCccEEEeccccccCCh-hHHHHHHHHHHHcccCC-EEEEE
Q 004178 604 TV----FDSRLHGFDIGTCLEVIEHMEE-DEASQFGNIVLSSFRPR-ILIVS 649 (770)
Q Consensus 604 ed----lp~~d~sFDlVVc~eVLEHL~~-d~~~~fleeI~rvLKPG-~LIIS 649 (770)
.+ .+.. ..||+|+ ++++. +....+++++.++|||| .+++.
T Consensus 132 ~~~~~~~~~~-~~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 132 NKPQEYANIV-EKVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp TCGGGGTTTS-CCEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcccccccC-ccEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 87 6655 7899998 44442 23356667899999998 55554
No 152
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.18 E-value=5.5e-11 Score=120.58 Aligned_cols=125 Identities=18% Similarity=0.130 Sum_probs=87.1
Q ss_pred HHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcC--CCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCc-
Q 004178 518 QRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDY--PTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVK- 594 (770)
Q Consensus 518 qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~--ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~- 594 (770)
..++.+++.+....+.+|||+|||+|.++..+++. . +..+|+|+|+|+.+++.|++++...... +..
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~-~~~~v~gvDis~~~l~~A~~~~~~~~~~---------~~~~ 107 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRR-SLRQVIASDVDPAPLELAAKNLALLSPA---------GLTA 107 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGG-GEEEEEEEESCHHHHHHHHHHHHTTSHH---------HHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhcc-CCCeEEEEECCHHHHHHHHHHHHHhhhc---------cccc
Confidence 34444444444445689999999999999999876 2 2378999999999999999876422000 000
Q ss_pred c-------------------------EE-------------EEECCccccCC-----CCCCccEEEeccccccCCh----
Q 004178 595 S-------------------------AV-------------LFDGSITVFDS-----RLHGFDIGTCLEVIEHMEE---- 627 (770)
Q Consensus 595 ~-------------------------Ve-------------f~~GDaedlp~-----~d~sFDlVVc~eVLEHL~~---- 627 (770)
+ ++ +.++|+.+... ....||+|+|.-.+.+...
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~ 187 (250)
T 1o9g_A 108 RELERREQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQ 187 (250)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSC
T ss_pred cchhhhhhhhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeecccccccc
Confidence 1 45 99999877542 3348999999876555442
Q ss_pred ---hHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 628 ---DEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 628 ---d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
+....+++++.++|||| .+++ +++.
T Consensus 188 ~~~~~~~~~l~~~~~~LkpgG~l~~-~~~~ 216 (250)
T 1o9g_A 188 VPGQPVAGLLRSLASALPAHAVIAV-TDRS 216 (250)
T ss_dssp CCHHHHHHHHHHHHHHSCTTCEEEE-EESS
T ss_pred ccccHHHHHHHHHHHhcCCCcEEEE-eCcc
Confidence 44567777899999998 6666 5443
No 153
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.18 E-value=7.2e-11 Score=121.58 Aligned_cols=122 Identities=11% Similarity=0.028 Sum_probs=87.4
Q ss_pred HHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCC-ccEEEEEC
Q 004178 523 ALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDV-KSAVLFDG 601 (770)
Q Consensus 523 Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~-~~Vef~~G 601 (770)
+...+...++.+|||+|||+|.++..+++.. +..+|+|+|+++.+++.|++++.... ..+. .+++++++
T Consensus 28 L~~~~~~~~~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~---------~~~l~~~v~~~~~ 97 (260)
T 2ozv_A 28 LASLVADDRACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPD---------NAAFSARIEVLEA 97 (260)
T ss_dssp HHHTCCCCSCEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGG---------GTTTGGGEEEEEC
T ss_pred HHHHhcccCCCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhh---------hCCCcceEEEEeC
Confidence 3445555567899999999999999999876 44799999999999999998764200 0122 36999999
Q ss_pred Ccccc-------CCCCCCccEEEecccc----------------ccCChhHHHHHHHHHHHcccCC-EEEEEecCCc
Q 004178 602 SITVF-------DSRLHGFDIGTCLEVI----------------EHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 602 Daedl-------p~~d~sFDlVVc~eVL----------------EHL~~d~~~~fleeI~rvLKPG-~LIISTPN~e 654 (770)
|+.+. .+..+.||+|++.-.+ .|........+++.+.++|||| .+++..+...
T Consensus 98 D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 174 (260)
T 2ozv_A 98 DVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQS 174 (260)
T ss_dssp CTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGG
T ss_pred CHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHH
Confidence 99886 2346789999997222 1222233567777899999998 6666655543
No 154
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.17 E-value=2.7e-11 Score=123.82 Aligned_cols=113 Identities=12% Similarity=0.079 Sum_probs=84.6
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
+++...+...++.+|||||||+|..+..|++..++..+|+|+|+++++++.|++++... ....++++++
T Consensus 50 ~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-----------g~~~~i~~~~ 118 (242)
T 3r3h_A 50 QFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREA-----------KQEHKIKLRL 118 (242)
T ss_dssp HHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHT-----------TCTTTEEEEE
T ss_pred HHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-----------CCCCcEEEEE
Confidence 34444444556789999999999999999987544589999999999999999887531 1234799999
Q ss_pred CCccccCCC------CCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEE
Q 004178 601 GSITVFDSR------LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVS 649 (770)
Q Consensus 601 GDaedlp~~------d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIS 649 (770)
+|+.+.... .+.||+|++.... .....+++.+.++|||| .+++.
T Consensus 119 gda~~~l~~~~~~~~~~~fD~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 119 GPALDTLHSLLNEGGEHQFDFIFIDADK-----TNYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp SCHHHHHHHHHHHHCSSCEEEEEEESCG-----GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCHHHHHHHHhhccCCCCEeEEEEcCCh-----HHhHHHHHHHHHhcCCCeEEEEE
Confidence 998764332 4789999886542 23335566799999999 55554
No 155
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.16 E-value=1.6e-10 Score=124.88 Aligned_cols=107 Identities=14% Similarity=0.150 Sum_probs=85.1
Q ss_pred HHHHhh-cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 523 ALQHIK-ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 523 Il~~L~-~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
+++.+. ..+..+|||||||+|.++..+++.. +..+++++|+ +.+++.|++ ..++++..+
T Consensus 194 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------------------~~~v~~~~~ 253 (368)
T 3reo_A 194 ILEMYNGFEGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPA------------------FSGVEHLGG 253 (368)
T ss_dssp HHTTCCTTTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------------------CTTEEEEEC
T ss_pred HHHhcccccCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhh------------------cCCCEEEec
Confidence 334333 4456899999999999999999876 5578999999 888876632 247999999
Q ss_pred CccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 602 SITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 602 Daedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
|+.+ +.+. . |+|++..++||++++....++++++++|||| .++|....
T Consensus 254 d~~~-~~p~-~-D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 254 DMFD-GVPK-G-DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp CTTT-CCCC-C-SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred CCCC-CCCC-C-CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 9986 4443 3 9999999999999777778888999999998 77665543
No 156
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.16 E-value=2.1e-11 Score=130.46 Aligned_cols=117 Identities=13% Similarity=0.154 Sum_probs=90.9
Q ss_pred HHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEE
Q 004178 520 VEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLF 599 (770)
Q Consensus 520 ~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~ 599 (770)
.+.+++.+....+.+|||+|||+|.++..+++.+ +..+|+|+|+|+.+++.|++++... + ..+++.
T Consensus 185 ~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~------------~-~~~~~~ 250 (343)
T 2pjd_A 185 SQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAAN------------G-VEGEVF 250 (343)
T ss_dssp HHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHT------------T-CCCEEE
T ss_pred HHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHh------------C-CCCEEE
Confidence 3456666655567799999999999999999876 4469999999999999999887421 1 246778
Q ss_pred ECCccccCCCCCCccEEEeccccccC---ChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 600 DGSITVFDSRLHGFDIGTCLEVIEHM---EEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 600 ~GDaedlp~~d~sFDlVVc~eVLEHL---~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
.+|+.+.. +++||+|+|..++|+. ..+....+++++.++|||| .+++.++.
T Consensus 251 ~~d~~~~~--~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 251 ASNVFSEV--KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp ECSTTTTC--CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred Eccccccc--cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 89987654 5789999999999863 2345567778899999998 66666654
No 157
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.16 E-value=8.3e-11 Score=117.83 Aligned_cols=107 Identities=11% Similarity=0.088 Sum_probs=81.2
Q ss_pred hhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccc-
Q 004178 527 IKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITV- 605 (770)
Q Consensus 527 L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaed- 605 (770)
+...++.+|||+|||+|.++..|++..++..+|+|+|+++.+++.+.++... ..++++.++|+.+
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~--------------~~~v~~~~~d~~~~ 138 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK--------------RTNIIPVIEDARHP 138 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH--------------CTTEEEECSCTTCG
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc--------------cCCeEEEEcccCCh
Confidence 3445678999999999999999998743447999999999988877765431 1479999999987
Q ss_pred --cCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEec
Q 004178 606 --FDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 606 --lp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
++..++.||+|++... ..+....+..++.++|||| .++++.+
T Consensus 139 ~~~~~~~~~~D~V~~~~~----~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 139 HKYRMLIAMVDVIFADVA----QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp GGGGGGCCCEEEEEECCC----CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhcccCCcEEEEEEcCC----CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 3445678999998544 2345556666799999998 6666544
No 158
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.16 E-value=9.3e-11 Score=115.48 Aligned_cols=107 Identities=13% Similarity=0.064 Sum_probs=80.4
Q ss_pred hhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc
Q 004178 527 IKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF 606 (770)
Q Consensus 527 L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl 606 (770)
+...++.+|||+|||+|..+..+++..++..+|+|+|+++.+++.|++++... ....++++.++|+.+.
T Consensus 52 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----------~~~~~v~~~~~d~~~~ 120 (210)
T 3c3p_A 52 ARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDN-----------GLIDRVELQVGDPLGI 120 (210)
T ss_dssp HHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH-----------SGGGGEEEEESCHHHH
T ss_pred HHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC-----------CCCceEEEEEecHHHH
Confidence 33446789999999999999999987533589999999999999999877532 1124699999998764
Q ss_pred -CCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEe
Q 004178 607 -DSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 607 -p~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIST 650 (770)
+...+ ||+|++.... .....+.+.+.++|||| .+++..
T Consensus 121 ~~~~~~-fD~v~~~~~~-----~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 121 AAGQRD-IDILFMDCDV-----FNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp HTTCCS-EEEEEEETTT-----SCHHHHHHHHGGGEEEEEEEEEES
T ss_pred hccCCC-CCEEEEcCCh-----hhhHHHHHHHHHhcCCCeEEEEEC
Confidence 44345 9999987432 22345666799999999 555543
No 159
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.15 E-value=2.4e-10 Score=122.65 Aligned_cols=144 Identities=13% Similarity=0.015 Sum_probs=101.0
Q ss_pred HHHHHhh-cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCc--cEEE
Q 004178 522 YALQHIK-ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVK--SAVL 598 (770)
Q Consensus 522 ~Il~~L~-~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~--~Vef 598 (770)
++.+.+. ..++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++... +.. ++++
T Consensus 143 ~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~g---a~V~~VD~s~~al~~a~~n~~~~------------gl~~~~v~~ 207 (332)
T 2igt_A 143 WLKNAVETADRPLKVLNLFGYTGVASLVAAAAG---AEVTHVDASKKAIGWAKENQVLA------------GLEQAPIRW 207 (332)
T ss_dssp HHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTT---CEEEEECSCHHHHHHHHHHHHHH------------TCTTSCEEE
T ss_pred HHHHHHHhcCCCCcEEEcccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHc------------CCCccceEE
Confidence 3445444 3456899999999999999999976 59999999999999999987531 222 4999
Q ss_pred EECCccccCCC----CCCccEEEec----c------ccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHhhhc
Q 004178 599 FDGSITVFDSR----LHGFDIGTCL----E------VIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQKSS 663 (770)
Q Consensus 599 ~~GDaedlp~~----d~sFDlVVc~----e------VLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~~~~ 663 (770)
+++|+.++... ...||+|++. . ++++. +....+++.+.++|+|| .+++.+.+..
T Consensus 208 i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~--~~~~~ll~~~~~~LkpgG~lli~~~~~~--------- 276 (332)
T 2igt_A 208 ICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLF--DHLPLMLDICREILSPKALGLVLTAYSI--------- 276 (332)
T ss_dssp ECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHH--HHHHHHHHHHHHTBCTTCCEEEEEECCT---------
T ss_pred EECcHHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHH--HHHHHHHHHHHHhcCcCcEEEEEECCCC---------
Confidence 99998775432 4689999993 2 12222 34456667799999998 6566554421
Q ss_pred cccCCCCCchhhhhccccccCCCcccccCHHHHHHHHHHHHHHCCcEEEEEeee
Q 004178 664 STIQEDDPDEKTQLQSCKFRNHDHKFEWTRDQFNCWATELAARHNYSVEFSGVG 717 (770)
Q Consensus 664 ~~g~~e~pde~~~~~~~~fRh~DHkfewTreEF~~Wa~~La~r~GY~VEF~GvG 717 (770)
..+.+.|.+.+...+.+.|+.++...+.
T Consensus 277 --------------------------~~~~~~~~~~l~~a~~~~g~~v~~~e~~ 304 (332)
T 2igt_A 277 --------------------------RASFYSMHELMRETMRGAGGVVASGELV 304 (332)
T ss_dssp --------------------------TSCHHHHHHHHHHHTTTSCSEEEEEEEE
T ss_pred --------------------------CCCHHHHHHHHHHHHHHcCCeEEEEEEe
Confidence 1245566766666677789988743333
No 160
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.15 E-value=1.2e-10 Score=115.93 Aligned_cols=103 Identities=15% Similarity=0.125 Sum_probs=79.3
Q ss_pred cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC-
Q 004178 529 ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD- 607 (770)
Q Consensus 529 ~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp- 607 (770)
..++.+|||+|||+|.++..+++..++..+|+|+|+++.+++.+++++. .. .++++.++|+.+..
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~-------------~~-~~v~~~~~d~~~~~~ 136 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVE-------------ER-RNIVPILGDATKPEE 136 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHS-------------SC-TTEEEEECCTTCGGG
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHh-------------cc-CCCEEEEccCCCcch
Confidence 5567899999999999999999774344799999999999999988663 12 58999999998732
Q ss_pred --CCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEE
Q 004178 608 --SRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVS 649 (770)
Q Consensus 608 --~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIS 649 (770)
....+||+|++... .++....++.++.++|||| .+++.
T Consensus 137 ~~~~~~~~D~v~~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 137 YRALVPKVDVIFEDVA----QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp GTTTCCCEEEEEECCC----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcccCCceEEEECCC----CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 22358999997654 2244456566799999998 55555
No 161
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.15 E-value=2e-10 Score=122.36 Aligned_cols=112 Identities=15% Similarity=0.130 Sum_probs=84.7
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
.+.+.+...++.+|||+|||+|.++..+++.+ ..+|+|+|++ .|++.|++++... ....+++++++
T Consensus 29 ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g--~~~v~~vD~s-~~~~~a~~~~~~~-----------~~~~~i~~~~~ 94 (328)
T 1g6q_1 29 AIIQNKDLFKDKIVLDVGCGTGILSMFAAKHG--AKHVIGVDMS-SIIEMAKELVELN-----------GFSDKITLLRG 94 (328)
T ss_dssp HHHHHHHHHTTCEEEEETCTTSHHHHHHHHTC--CSEEEEEESS-THHHHHHHHHHHT-----------TCTTTEEEEES
T ss_pred HHHhhHhhcCCCEEEEecCccHHHHHHHHHCC--CCEEEEEChH-HHHHHHHHHHHHc-----------CCCCCEEEEEC
Confidence 34444455568899999999999999999875 2599999999 5999998876431 22347999999
Q ss_pred CccccCCCCCCccEEEeccccccCC-hhHHHHHHHHHHHcccCC-EEE
Q 004178 602 SITVFDSRLHGFDIGTCLEVIEHME-EDEASQFGNIVLSSFRPR-ILI 647 (770)
Q Consensus 602 Daedlp~~d~sFDlVVc~eVLEHL~-~d~~~~fleeI~rvLKPG-~LI 647 (770)
|+.+++.+.+.||+|++..+.+++. ......++..+.++|||| .++
T Consensus 95 d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 95 KLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp CTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred chhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 9999887778999999976544442 123445666789999999 443
No 162
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.15 E-value=2.4e-10 Score=111.51 Aligned_cols=96 Identities=11% Similarity=0.135 Sum_probs=73.3
Q ss_pred hcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 528 KESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 528 ~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
...++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.|++++ .++++.++|+.+++
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~-----------------~~~~~~~~d~~~~~ 108 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLLG--AESVTAFDIDPDAIETAKRNC-----------------GGVNFMVADVSEIS 108 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHTT--BSEEEEEESCHHHHHHHHHHC-----------------TTSEEEECCGGGCC
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhc-----------------CCCEEEECcHHHCC
Confidence 34467899999999999999999874 257999999999999998854 16899999998875
Q ss_pred CCCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEE
Q 004178 608 SRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILI 647 (770)
Q Consensus 608 ~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LI 647 (770)
+.||+|++...++|+.......+++.+.+.+ |.++
T Consensus 109 ---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~ 143 (200)
T 1ne2_A 109 ---GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--MWIY 143 (200)
T ss_dssp ---CCEEEEEECCCC-------CHHHHHHHHHHE--EEEE
T ss_pred ---CCeeEEEECCCchhccCchhHHHHHHHHHhc--CcEE
Confidence 6899999999999987433345666788888 6333
No 163
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.14 E-value=2.3e-10 Score=113.53 Aligned_cols=113 Identities=15% Similarity=0.055 Sum_probs=82.9
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
+++...+...++.+|||+|||+|..+..+++..++..+|+|+|+++.+++.|++++... ....++++.+
T Consensus 59 ~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-----------g~~~~i~~~~ 127 (229)
T 2avd_A 59 QLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQA-----------EAEHKIDLRL 127 (229)
T ss_dssp HHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHT-----------TCTTTEEEEE
T ss_pred HHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC-----------CCCCeEEEEE
Confidence 34444445556889999999999999999987533589999999999999999877531 1225799999
Q ss_pred CCccccCC----CC--CCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEE
Q 004178 601 GSITVFDS----RL--HGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVS 649 (770)
Q Consensus 601 GDaedlp~----~d--~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIS 649 (770)
+|+.+... .. +.||+|++.... .....+.+.+.++|+|| .+++.
T Consensus 128 ~d~~~~~~~~~~~~~~~~~D~v~~d~~~-----~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 128 KPALETLDELLAAGEAGTFDVAVVDADK-----ENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp SCHHHHHHHHHHTTCTTCEEEEEECSCS-----TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCHHHHHHHHHhcCCCCCccEEEECCCH-----HHHHHHHHHHHHHcCCCeEEEEE
Confidence 99865321 11 689999986542 22345566799999999 55554
No 164
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.14 E-value=1.1e-10 Score=116.88 Aligned_cols=119 Identities=13% Similarity=0.140 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCcc
Q 004178 516 SKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKS 595 (770)
Q Consensus 516 ~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~ 595 (770)
.+....++...+...++.+|||+|||+|.++..+++.. +..+|+|+|+++.+++.|++++... ....+
T Consensus 39 ~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~-----------~~~~~ 106 (233)
T 2gpy_A 39 DLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQAL-PEATIVSIERDERRYEEAHKHVKAL-----------GLESR 106 (233)
T ss_dssp CHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHT-----------TCTTT
T ss_pred CHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHc-----------CCCCc
Confidence 33334455555555678899999999999999999875 3489999999999999999887531 12246
Q ss_pred EEEEECCcccc-CCC--CCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEec
Q 004178 596 AVLFDGSITVF-DSR--LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 596 Vef~~GDaedl-p~~--d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
+++..+|+.+. +.. .+.||+|++....+ ....+++.+.++|+|| .+++.+.
T Consensus 107 v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 107 IELLFGDALQLGEKLELYPLFDVLFIDAAKG-----QYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp EEEECSCGGGSHHHHTTSCCEEEEEEEGGGS-----CHHHHHHHHGGGEEEEEEEEEETT
T ss_pred EEEEECCHHHHHHhcccCCCccEEEECCCHH-----HHHHHHHHHHHHcCCCeEEEEEcC
Confidence 99999998774 322 47899999977754 2335566799999999 6666543
No 165
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.14 E-value=4.6e-11 Score=119.39 Aligned_cols=91 Identities=13% Similarity=0.084 Sum_probs=74.1
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCc-cccCC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSI-TVFDS 608 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDa-edlp~ 608 (770)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|+++. +++++.++|+ ..+++
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~-----------------~~~~~~~~d~~~~~~~ 106 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQA---ARWAAYDFSPELLKLARANA-----------------PHADVYEWNGKGELPA 106 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHC-----------------TTSEEEECCSCSSCCT
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhC-----------------CCceEEEcchhhccCC
Confidence 457899999999999999999986 79999999999999998742 3689999999 56777
Q ss_pred C-CCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEE
Q 004178 609 R-LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIV 648 (770)
Q Consensus 609 ~-d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LII 648 (770)
. +++||+|++.. +. ..+++++.++||||..++
T Consensus 107 ~~~~~fD~v~~~~-------~~-~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 107 GLGAPFGLIVSRR-------GP-TSVILRLPELAAPDAHFL 139 (226)
T ss_dssp TCCCCEEEEEEES-------CC-SGGGGGHHHHEEEEEEEE
T ss_pred cCCCCEEEEEeCC-------CH-HHHHHHHHHHcCCCcEEE
Confidence 6 78999999972 11 133456999999994444
No 166
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.14 E-value=1.1e-10 Score=116.56 Aligned_cols=109 Identities=16% Similarity=0.177 Sum_probs=82.7
Q ss_pred cCCCCEEEEEcCccchHHHHHhcCCCC-----CceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCc
Q 004178 529 ESCATTLVDFGCGSGSLLDSLLDYPTA-----LEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSI 603 (770)
Q Consensus 529 ~~~~~rVLDIGCGtG~ll~~LAk~ggp-----~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDa 603 (770)
..++.+|||+|||+|.++..+++..+. ..+|+|+|+++.+++.|++++....... ....++++..+|+
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-------~~~~~v~~~~~d~ 154 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSM-------LDSGQLLIVEGDG 154 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHH-------HHHTSEEEEESCG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccc-------cCCCceEEEECCc
Confidence 456789999999999999999875421 1489999999999999998775321000 0024799999999
Q ss_pred cccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 604 TVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 604 edlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
.+.....+.||+|++..+++|+. +++.++|||| .+++.+..
T Consensus 155 ~~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 155 RKGYPPNAPYNAIHVGAAAPDTP--------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp GGCCGGGCSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEESC
T ss_pred ccCCCcCCCccEEEECCchHHHH--------HHHHHHhcCCCEEEEEEec
Confidence 87322337899999999999987 3588899998 77776654
No 167
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.13 E-value=2.6e-11 Score=121.49 Aligned_cols=102 Identities=12% Similarity=0.064 Sum_probs=82.6
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++... ....++++.++|+.+++ .
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~-----------~~~~~~~~~~~d~~~~~-~ 141 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVY-----------GIADKIEFICGDFLLLA-S 141 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHT-----------TCGGGEEEEESCHHHHG-G
T ss_pred cCCCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHc-----------CCCcCeEEEECChHHhc-c
Confidence 368899999999999999999986 89999999999999999887531 11258999999998877 4
Q ss_pred CCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEE
Q 004178 610 LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIV 648 (770)
Q Consensus 610 d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LII 648 (770)
.+.||+|++...++|..... .. ..++.++|+|| .+++
T Consensus 142 ~~~~D~v~~~~~~~~~~~~~-~~-~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 142 FLKADVVFLSPPWGGPDYAT-AE-TFDIRTMMSPDGFEIF 179 (241)
T ss_dssp GCCCSEEEECCCCSSGGGGG-SS-SBCTTTSCSSCHHHHH
T ss_pred cCCCCEEEECCCcCCcchhh-hH-HHHHHhhcCCcceeHH
Confidence 57999999999999877332 23 33588999998 5443
No 168
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.13 E-value=3.1e-10 Score=122.60 Aligned_cols=106 Identities=15% Similarity=0.163 Sum_probs=85.1
Q ss_pred HHHHhh-cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 523 ALQHIK-ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 523 Il~~L~-~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
+++.+. ..+..+|||||||+|.++..+++.. +..+++++|+ +.+++.|++ .+++++..+
T Consensus 192 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------------------~~~v~~~~~ 251 (364)
T 3p9c_A 192 LLELYHGFEGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQ------------------FPGVTHVGG 251 (364)
T ss_dssp HHHHCCTTTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------------------CTTEEEEEC
T ss_pred HHHhcccccCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhh------------------cCCeEEEeC
Confidence 444444 4457899999999999999999876 4578999999 888776632 247999999
Q ss_pred CccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEec
Q 004178 602 SITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 602 Daedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
|+.+ +.+. . |+|++..++||+++++...++++++++|||| .++|...
T Consensus 252 D~~~-~~p~-~-D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 252 DMFK-EVPS-G-DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp CTTT-CCCC-C-SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CcCC-CCCC-C-CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 9987 5543 3 9999999999999777778888999999998 6766543
No 169
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.12 E-value=4.2e-10 Score=117.09 Aligned_cols=121 Identities=18% Similarity=0.144 Sum_probs=87.3
Q ss_pred hcCCchHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCC
Q 004178 509 ALFSPPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAV 588 (770)
Q Consensus 509 ~~F~PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~ 588 (770)
..|++....+|.. +.+.+ .++.+|||+|||+|.++..+++.+. .+|+|+|+|+.+++.|++++...
T Consensus 106 ~~f~~~~~~~~~~-l~~~~--~~~~~VLDlgcG~G~~~~~la~~~~--~~V~~vD~s~~~~~~a~~n~~~n--------- 171 (278)
T 2frn_A 106 IMFSPANVKERVR-MAKVA--KPDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLN--------- 171 (278)
T ss_dssp SCCCGGGHHHHHH-HHHHC--CTTCEEEETTCTTTTTHHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHT---------
T ss_pred eeEcCCcHHHHHH-HHHhC--CCCCEEEEecccCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHc---------
Confidence 3455554444443 33333 3478999999999999999998873 37999999999999999887521
Q ss_pred CCCCCccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 589 PCTDVKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 589 pr~~~~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
+...++++.++|+.++.. .+.||+|++.... ....+.+.+.++|||| .+++.+..
T Consensus 172 --~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p~------~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 172 --KVEDRMSAYNMDNRDFPG-ENIADRILMGYVV------RTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp --TCTTTEEEECSCTTTCCC-CSCEEEEEECCCS------SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred --CCCceEEEEECCHHHhcc-cCCccEEEECCch------hHHHHHHHHHHHCCCCeEEEEEEee
Confidence 122359999999998876 6789999885332 1124555799999998 66665543
No 170
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.12 E-value=1.7e-10 Score=111.12 Aligned_cols=96 Identities=11% Similarity=0.161 Sum_probs=74.7
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
.++.+|||+|||+|.++..+++.+ +|+|+|+|+.|++. . .++++.++|+.+ +..
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~----~-----------------~~~~~~~~d~~~-~~~ 75 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES----H-----------------RGGNLVRADLLC-SIN 75 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT----C-----------------SSSCEEECSTTT-TBC
T ss_pred CCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc----c-----------------cCCeEEECChhh-hcc
Confidence 567899999999999999998875 99999999999977 1 258899999987 444
Q ss_pred CCCccEEEeccccccCChh-------HHHHHHHHHHHcccCC-EEEEEecC
Q 004178 610 LHGFDIGTCLEVIEHMEED-------EASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 610 d~sFDlVVc~eVLEHL~~d-------~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
++.||+|++...+++.++. ....+.+.+.+.+ || .+++.++.
T Consensus 76 ~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 76 QESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG
T ss_pred cCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEec
Confidence 5899999999888876532 2234445677788 87 77666543
No 171
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.11 E-value=2.7e-10 Score=117.31 Aligned_cols=107 Identities=13% Similarity=0.181 Sum_probs=83.2
Q ss_pred hhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccc-
Q 004178 527 IKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITV- 605 (770)
Q Consensus 527 L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaed- 605 (770)
+...++.+|||+|||+|.++..|++..++..+|+|+|++++|++.++++.. ...++..+.+|+..
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~--------------~~~ni~~V~~d~~~p 138 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVR--------------DRRNIFPILGDARFP 138 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHST--------------TCTTEEEEESCTTCG
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhH--------------hhcCeeEEEEeccCc
Confidence 446789999999999999999999987788999999999999999987652 23578888888755
Q ss_pred --cCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEec
Q 004178 606 --FDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 606 --lp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
.+.....+|+|++. +.|.. +...++.++.++|||| .++++..
T Consensus 139 ~~~~~~~~~vDvVf~d--~~~~~--~~~~~l~~~~r~LKpGG~lvI~ik 183 (233)
T 4df3_A 139 EKYRHLVEGVDGLYAD--VAQPE--QAAIVVRNARFFLRDGGYMLMAIK 183 (233)
T ss_dssp GGGTTTCCCEEEEEEC--CCCTT--HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccccccceEEEEEEe--ccCCh--hHHHHHHHHHHhccCCCEEEEEEe
Confidence 34456789998863 33333 4455667899999998 6666543
No 172
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.11 E-value=1.4e-10 Score=119.26 Aligned_cols=100 Identities=16% Similarity=0.159 Sum_probs=80.2
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
.++.+|||||||+|..+..|+... +..+|+|+|+++.+++.|++++... +..+++++++|+++++..
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~------------~l~~v~~~~~d~~~~~~~ 145 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVL------------GLKGARALWGRAEVLARE 145 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHH------------TCSSEEEEECCHHHHTTS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHh------------CCCceEEEECcHHHhhcc
Confidence 457899999999999999998765 4589999999999999999887532 334699999999987753
Q ss_pred ---CCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEE
Q 004178 610 ---LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIV 648 (770)
Q Consensus 610 ---d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LII 648 (770)
.+.||+|++..+- +...+.+.+.++|||| .+++
T Consensus 146 ~~~~~~fD~I~s~a~~------~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 146 AGHREAYARAVARAVA------PLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp TTTTTCEEEEEEESSC------CHHHHHHHHGGGEEEEEEEEE
T ss_pred cccCCCceEEEECCcC------CHHHHHHHHHHHcCCCeEEEE
Confidence 4789999997542 2346677899999998 5554
No 173
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.11 E-value=2.4e-10 Score=120.59 Aligned_cols=114 Identities=16% Similarity=0.194 Sum_probs=83.8
Q ss_pred CCCCEEEEEcCcc--chHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 530 SCATTLVDFGCGS--GSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 530 ~~~~rVLDIGCGt--G~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
....+|||||||. +.++..+++...+..+|+|+|.|+.||+.|++++.. ....+++|+++|+.+.+
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~------------~~~~~~~~v~aD~~~~~ 144 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAS------------TPEGRTAYVEADMLDPA 144 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCC------------CSSSEEEEEECCTTCHH
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhcc------------CCCCcEEEEEecccChh
Confidence 4567999999997 444444544322458999999999999999987731 12347999999998753
Q ss_pred C----C--CCCcc-----EEEeccccccCChhH-HHHHHHHHHHcccCC-EEEEEecCCch
Q 004178 608 S----R--LHGFD-----IGTCLEVIEHMEEDE-ASQFGNIVLSSFRPR-ILIVSTPNYEY 655 (770)
Q Consensus 608 ~----~--d~sFD-----lVVc~eVLEHL~~d~-~~~fleeI~rvLKPG-~LIISTPN~ef 655 (770)
. . ...|| +|+++.+|||+++++ ...+++.+.+.|+|| .+++++...++
T Consensus 145 ~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~ 205 (277)
T 3giw_A 145 SILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEF 205 (277)
T ss_dssp HHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTT
T ss_pred hhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCC
Confidence 1 1 24455 688999999999654 355666799999999 88888766554
No 174
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.11 E-value=8.2e-10 Score=118.80 Aligned_cols=113 Identities=16% Similarity=0.171 Sum_probs=90.4
Q ss_pred HHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECC
Q 004178 523 ALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGS 602 (770)
Q Consensus 523 Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GD 602 (770)
+.+.+......+|||||||+|.++..+++.. |..+++..|. +.+++.|++++. .....+|++..+|
T Consensus 171 ~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~------------~~~~~rv~~~~gD 236 (353)
T 4a6d_A 171 VLTAFDLSVFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFS------------FQEEEQIDFQEGD 236 (353)
T ss_dssp HHHSSCGGGCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSC------------C--CCSEEEEESC
T ss_pred HHHhcCcccCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhh------------hcccCceeeecCc
Confidence 3444445567899999999999999999887 5678999996 889999987653 2245689999999
Q ss_pred ccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEec
Q 004178 603 ITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 603 aedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
+.+.+. .++|+|++..+||++++++...+++++++.|+|| .++|..+
T Consensus 237 ~~~~~~--~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~ 284 (353)
T 4a6d_A 237 FFKDPL--PEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIES 284 (353)
T ss_dssp TTTSCC--CCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred cccCCC--CCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEe
Confidence 876543 4689999999999999877788888999999998 6666543
No 175
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.11 E-value=1.7e-10 Score=122.46 Aligned_cols=119 Identities=18% Similarity=0.165 Sum_probs=89.1
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
.+...+...++.+|||+|||+|..+..|++..++..+|+|+|+++.+++.+++++... +..++++.++
T Consensus 109 l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~------------g~~~v~~~~~ 176 (315)
T 1ixk_A 109 YPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRL------------GVLNVILFHS 176 (315)
T ss_dssp HHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH------------TCCSEEEESS
T ss_pred HHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHh------------CCCeEEEEEC
Confidence 3345556677899999999999999999976433479999999999999999987532 3457999999
Q ss_pred CccccCCCCCCccEEEe------ccccccCCh-------h-------HHHHHHHHHHHcccCC-EEEEEecC
Q 004178 602 SITVFDSRLHGFDIGTC------LEVIEHMEE-------D-------EASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 602 Daedlp~~d~sFDlVVc------~eVLEHL~~-------d-------~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
|+.+++...+.||+|++ .+++++.++ + ....+++++.++|||| .++++|..
T Consensus 177 D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 177 SSLHIGELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp CGGGGGGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred ChhhcccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 99887655578999998 344544331 1 1146677899999998 77777654
No 176
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.11 E-value=1.3e-10 Score=117.84 Aligned_cols=124 Identities=12% Similarity=0.103 Sum_probs=85.0
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccc-cC-
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITV-FD- 607 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaed-lp- 607 (770)
.++.+|||||||+|.++..+++.+ +..+|+|+|+|+.+++.|++++....... ....+..++++.++|+.+ ++
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~----~~~~~~~nv~~~~~D~~~~l~~ 122 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNT----ASKHGFQNINVLRGNAMKFLPN 122 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-----CCSTTTTEEEEECCTTSCGGG
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhcc----ccccCCCcEEEEeccHHHHHHH
Confidence 356799999999999999999876 44689999999999999998765321100 000034589999999986 55
Q ss_pred -CCCCCccEEEeccccccCChh------HHHHHHHHHHHcccCC-EEEEEecCCchhHH
Q 004178 608 -SRLHGFDIGTCLEVIEHMEED------EASQFGNIVLSSFRPR-ILIVSTPNYEYNAI 658 (770)
Q Consensus 608 -~~d~sFDlVVc~eVLEHL~~d------~~~~fleeI~rvLKPG-~LIISTPN~efN~l 658 (770)
+..+.+|.|+....-.+.... ....+++.+.++|+|| .+++.|.+.++...
T Consensus 123 ~~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~ 181 (246)
T 2vdv_E 123 FFEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEW 181 (246)
T ss_dssp TSCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHH
T ss_pred hccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHH
Confidence 456789998743211111000 0035667799999999 77777777554443
No 177
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.10 E-value=1.6e-10 Score=107.64 Aligned_cols=103 Identities=11% Similarity=0.021 Sum_probs=80.3
Q ss_pred cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC-
Q 004178 529 ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD- 607 (770)
Q Consensus 529 ~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp- 607 (770)
..++.+|||+|||+|.++..+++..++..+|+|+|+++ +++. .++++.++|+.+.+
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------------------~~~~~~~~d~~~~~~ 76 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------------------VGVDFLQGDFRDELV 76 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------------------TTEEEEESCTTSHHH
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------------------CcEEEEEcccccchh
Confidence 45678999999999999999988732447999999998 6421 36899999998876
Q ss_pred -------CCCCCccEEEeccccccCChhH---H------HHHHHHHHHcccCC-EEEEEecCCc
Q 004178 608 -------SRLHGFDIGTCLEVIEHMEEDE---A------SQFGNIVLSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 608 -------~~d~sFDlVVc~eVLEHL~~d~---~------~~fleeI~rvLKPG-~LIISTPN~e 654 (770)
..++.||+|++..++++..... . ..+++++.++|+|| .+++.+++..
T Consensus 77 ~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 77 MKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred hhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 5567899999999888776321 1 46667899999998 7777776643
No 178
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.10 E-value=4.4e-10 Score=112.40 Aligned_cols=116 Identities=15% Similarity=0.140 Sum_probs=89.8
Q ss_pred HHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccE
Q 004178 517 KQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSA 596 (770)
Q Consensus 517 ~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~V 596 (770)
+.....+.+.+...++.+|||+|||+|.++..+++.. .+|+|+|+++.+++.|++++... ....++
T Consensus 77 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~-----------~~~~~~ 142 (248)
T 2yvl_A 77 PKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEVA---GEVWTFEAVEEFYKTAQKNLKKF-----------NLGKNV 142 (248)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHHHHT-----------TCCTTE
T ss_pred chhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHc-----------CCCCcE
Confidence 4444566677777788999999999999999999874 79999999999999999876421 112579
Q ss_pred EEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 597 VLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 597 ef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
++..+|+.+.......||+|++ +.+ +.. .+++++.++|+|| .+++.+|+.
T Consensus 143 ~~~~~d~~~~~~~~~~~D~v~~-----~~~-~~~-~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 143 KFFNVDFKDAEVPEGIFHAAFV-----DVR-EPW-HYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp EEECSCTTTSCCCTTCBSEEEE-----CSS-CGG-GGHHHHHHHBCTTCEEEEEESSH
T ss_pred EEEEcChhhcccCCCcccEEEE-----CCc-CHH-HHHHHHHHHcCCCCEEEEEeCCH
Confidence 9999999886534578999987 333 222 3445799999998 888888874
No 179
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.10 E-value=5.8e-10 Score=116.05 Aligned_cols=122 Identities=11% Similarity=0.111 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeC-ChHHHHHHHHHHhhhhhcccccCCCCCCC-
Q 004178 516 SKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDI-SQKSLSRAAKIIHSKLSKKLDAAVPCTDV- 593 (770)
Q Consensus 516 ~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDI-SeemLe~ArkrL~~~~s~~~~~l~pr~~~- 593 (770)
.....+++.+.....++.+|||+|||+|.++..+++.+ ..+|+|+|+ ++.+++.|++++...... ..+.
T Consensus 64 ~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~--~~~v~~~D~s~~~~~~~a~~n~~~N~~~-------~~~~~ 134 (281)
T 3bzb_A 64 ARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAG--ADQVVATDYPDPEILNSLESNIREHTAN-------SCSSE 134 (281)
T ss_dssp HHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTT--CSEEEEEECSCHHHHHHHHHHHHTTCC-------------
T ss_pred HHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcC--CCEEEEEeCCCHHHHHHHHHHHHHhhhh-------hcccc
Confidence 34445556555555577899999999999999999876 249999999 899999999877311000 1111
Q ss_pred ----ccEEEEECCccc----cCC--CCCCccEEEeccccccCChhHHHHHHHHHHHccc---C--C-EEEE
Q 004178 594 ----KSAVLFDGSITV----FDS--RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFR---P--R-ILIV 648 (770)
Q Consensus 594 ----~~Vef~~GDaed----lp~--~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLK---P--G-~LII 648 (770)
.++++...+..+ +.. ....||+|++.++++|.+ ....+++.+.++|+ | | .+++
T Consensus 135 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~--~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 135 TVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQ--AHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp ----CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGG--GHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred cCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChH--HHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 367787655433 211 247899999999999865 34566678999999 8 7 4444
No 180
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.10 E-value=6.3e-10 Score=112.24 Aligned_cols=113 Identities=13% Similarity=0.080 Sum_probs=82.5
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
++...+...++.+|||+|||+|..+..+++..++..+|+|+|+++.+++.|++++... ....++++..+
T Consensus 63 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-----------g~~~~i~~~~~ 131 (232)
T 3cbg_A 63 FLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKA-----------GVAEKISLRLG 131 (232)
T ss_dssp HHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH-----------TCGGGEEEEES
T ss_pred HHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-----------CCCCcEEEEEc
Confidence 3333334446789999999999999999987533579999999999999999877532 12246999999
Q ss_pred Cccc----cCCCC--CCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEe
Q 004178 602 SITV----FDSRL--HGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 602 Daed----lp~~d--~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIST 650 (770)
|+.+ ++..+ +.||+|++.... .....+.+.+.++|+|| .+++..
T Consensus 132 d~~~~l~~l~~~~~~~~fD~V~~d~~~-----~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 132 PALATLEQLTQGKPLPEFDLIFIDADK-----RNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp CHHHHHHHHHTSSSCCCEEEEEECSCG-----GGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred CHHHHHHHHHhcCCCCCcCEEEECCCH-----HHHHHHHHHHHHHcCCCeEEEEeC
Confidence 9754 22223 789999976542 23345666799999999 665543
No 181
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.09 E-value=3.6e-10 Score=119.93 Aligned_cols=127 Identities=13% Similarity=0.058 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhh-----hcccccCCC
Q 004178 515 LSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKL-----SKKLDAAVP 589 (770)
Q Consensus 515 L~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~-----s~~~~~l~p 589 (770)
.++.....+++.+...++.+|||+|||+|.++..+++..++..+|+|+|+++.+++.|++++.... +..
T Consensus 89 ~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~------ 162 (336)
T 2b25_A 89 TFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHV------ 162 (336)
T ss_dssp CCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCS------
T ss_pred cCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccc------
Confidence 444455666777777788999999999999999999874355799999999999999999875321 100
Q ss_pred CCCCccEEEEECCcccc--CCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCc
Q 004178 590 CTDVKSAVLFDGSITVF--DSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 590 r~~~~~Vef~~GDaedl--p~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~e 654 (770)
.....++++..+|+.+. +..++.||+|++...- +. .+++++.++|||| .+++..++.+
T Consensus 163 ~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~------~~-~~l~~~~~~LkpgG~lv~~~~~~~ 223 (336)
T 2b25_A 163 EEWPDNVDFIHKDISGATEDIKSLTFDAVALDMLN------PH-VTLPVFYPHLKHGGVCAVYVVNIT 223 (336)
T ss_dssp SCCCCCEEEEESCTTCCC-------EEEEEECSSS------TT-TTHHHHGGGEEEEEEEEEEESSHH
T ss_pred cccCCceEEEECChHHcccccCCCCeeEEEECCCC------HH-HHHHHHHHhcCCCcEEEEEeCCHH
Confidence 01135799999999886 3445689999984321 11 2445799999998 7778887643
No 182
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.09 E-value=3.6e-10 Score=127.16 Aligned_cols=113 Identities=18% Similarity=0.143 Sum_probs=87.3
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
+.+++.+...++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.|++++... +...++++++
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~--~~~V~gvD~s~-~l~~A~~~~~~~-----------gl~~~v~~~~ 213 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKSN-----------NLTDRIVVIP 213 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTT--CSEEEEEECHH-HHHHHHHHHHHT-----------TCTTTEEEEE
T ss_pred HHHHHhhhhcCCCEEEEecCcccHHHHHHHHcC--CCEEEEEEcHH-HHHHHHHHHHHc-----------CCCCcEEEEE
Confidence 345555555678899999999999999999865 36999999998 999998876431 1225799999
Q ss_pred CCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEE
Q 004178 601 GSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIV 648 (770)
Q Consensus 601 GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LII 648 (770)
+|+.+++.+ +.||+|++..+++|+..+.....+..+.++|||| .+++
T Consensus 214 ~d~~~~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 214 GKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp SCTTTCCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred CchhhCccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 999987654 5899999988888886454444445689999998 5543
No 183
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.09 E-value=6.7e-10 Score=114.24 Aligned_cols=119 Identities=13% Similarity=0.031 Sum_probs=90.7
Q ss_pred HHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccE
Q 004178 517 KQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSA 596 (770)
Q Consensus 517 ~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~V 596 (770)
..|++.+.+.+.. +.+|||||||+|.++..+++.+ +..+|+|+|+++.+++.|++++... +...++
T Consensus 9 s~RL~~i~~~v~~--g~~VlDIGtGsG~l~i~la~~~-~~~~V~AvDi~~~al~~A~~N~~~~-----------gl~~~I 74 (230)
T 3lec_A 9 SKRLQKVANYVPK--GARLLDVGSDHAYLPIFLLQMG-YCDFAIAGEVVNGPYQSALKNVSEH-----------GLTSKI 74 (230)
T ss_dssp CHHHHHHHTTSCT--TEEEEEETCSTTHHHHHHHHTT-CEEEEEEEESSHHHHHHHHHHHHHT-----------TCTTTE
T ss_pred HHHHHHHHHhCCC--CCEEEEECCchHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHc-----------CCCCcE
Confidence 3578888777764 6899999999999999999986 5578999999999999999988532 123469
Q ss_pred EEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEecCC
Q 004178 597 VLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPNY 653 (770)
Q Consensus 597 ef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTPN~ 653 (770)
++..+|+.+...+...||+|+..++.- +....+++.....|+++..+|..|+.
T Consensus 75 ~~~~gD~l~~~~~~~~~D~IviaGmGg----~lI~~IL~~~~~~l~~~~~lIlqp~~ 127 (230)
T 3lec_A 75 DVRLANGLSAFEEADNIDTITICGMGG----RLIADILNNDIDKLQHVKTLVLQPNN 127 (230)
T ss_dssp EEEECSGGGGCCGGGCCCEEEEEEECH----HHHHHHHHHTGGGGTTCCEEEEEESS
T ss_pred EEEECchhhccccccccCEEEEeCCch----HHHHHHHHHHHHHhCcCCEEEEECCC
Confidence 999999988765545799998765543 33445666788889988444444553
No 184
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.08 E-value=8.7e-10 Score=115.54 Aligned_cols=124 Identities=19% Similarity=0.232 Sum_probs=89.1
Q ss_pred hHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCC
Q 004178 514 PLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDV 593 (770)
Q Consensus 514 PL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~ 593 (770)
|-....++.+.+.+...++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++++... +.
T Consensus 106 ~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~------------~l 171 (284)
T 1nv8_A 106 PETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERH------------GV 171 (284)
T ss_dssp TTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHT------------TC
T ss_pred hhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHc------------CC
Confidence 444445556666655445689999999999999999987 3489999999999999999987531 22
Q ss_pred c-cEEEEECCccccCCCCCCc---cEEEec------------cccccCChhH------HHHHHHHHH-HcccCC-EEEEE
Q 004178 594 K-SAVLFDGSITVFDSRLHGF---DIGTCL------------EVIEHMEEDE------ASQFGNIVL-SSFRPR-ILIVS 649 (770)
Q Consensus 594 ~-~Vef~~GDaedlp~~d~sF---DlVVc~------------eVLEHL~~d~------~~~fleeI~-rvLKPG-~LIIS 649 (770)
. +++|+++|+.+... +.| |+|+++ ++. |-+... ...+.+.+. +.|+|| .+++.
T Consensus 172 ~~~v~~~~~D~~~~~~--~~f~~~D~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 172 SDRFFVRKGEFLEPFK--EKFASIEMILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp TTSEEEEESSTTGGGG--GGTTTCCEEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred CCceEEEECcchhhcc--cccCCCCEEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 2 59999999987432 478 999996 333 433110 014556788 999998 77776
Q ss_pred ecCCc
Q 004178 650 TPNYE 654 (770)
Q Consensus 650 TPN~e 654 (770)
.+...
T Consensus 249 ~~~~q 253 (284)
T 1nv8_A 249 IGEDQ 253 (284)
T ss_dssp CCTTC
T ss_pred ECchH
Confidence 66543
No 185
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.08 E-value=2.4e-10 Score=123.05 Aligned_cols=106 Identities=19% Similarity=0.217 Sum_probs=84.5
Q ss_pred HHHHHhh-cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 522 YALQHIK-ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 522 ~Il~~L~-~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
.+++.+. ..+..+|||||||+|.++..+++.. +..+++++|+ +.+++.|++ .+++++..
T Consensus 199 ~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~------------------~~~v~~~~ 258 (372)
T 1fp1_D 199 RMLEIYTGFEGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPP------------------LSGIEHVG 258 (372)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------------------CTTEEEEE
T ss_pred HHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhh------------------cCCCEEEe
Confidence 3444443 3457899999999999999999876 4578999999 988876642 14699999
Q ss_pred CCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEe
Q 004178 601 GSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 601 GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIST 650 (770)
+|+.+ +.+. ||+|++..++||++++....+++++.++|||| .++|..
T Consensus 259 ~d~~~-~~~~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 259 GDMFA-SVPQ--GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp CCTTT-CCCC--EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCccc-CCCC--CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99977 4442 99999999999999766667888899999998 666653
No 186
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.08 E-value=7.5e-10 Score=114.84 Aligned_cols=119 Identities=11% Similarity=0.045 Sum_probs=89.7
Q ss_pred HHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccE
Q 004178 517 KQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSA 596 (770)
Q Consensus 517 ~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~V 596 (770)
..|++.+.+.+.. +.+|||||||+|.++..|++.+ +..+|+|+|+++.+++.|++++... +...+|
T Consensus 9 s~RL~~i~~~v~~--g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~-----------gl~~~I 74 (244)
T 3gnl_A 9 SKRLEKVASYITK--NERIADIGSDHAYLPCFAVKNQ-TASFAIAGEVVDGPFQSAQKQVRSS-----------GLTEQI 74 (244)
T ss_dssp CHHHHHHHTTCCS--SEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHT-----------TCTTTE
T ss_pred hHHHHHHHHhCCC--CCEEEEECCccHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHc-----------CCCceE
Confidence 3577888777764 6899999999999999999986 4578999999999999999988532 122469
Q ss_pred EEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEecCC
Q 004178 597 VLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPNY 653 (770)
Q Consensus 597 ef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTPN~ 653 (770)
++..+|+.+...+...||+|+..++.- +....+++.....|+++..+|..|+.
T Consensus 75 ~v~~gD~l~~~~~~~~~D~IviagmGg----~lI~~IL~~~~~~L~~~~~lIlq~~~ 127 (244)
T 3gnl_A 75 DVRKGNGLAVIEKKDAIDTIVIAGMGG----TLIRTILEEGAAKLAGVTKLILQPNI 127 (244)
T ss_dssp EEEECSGGGGCCGGGCCCEEEEEEECH----HHHHHHHHHTGGGGTTCCEEEEEESS
T ss_pred EEEecchhhccCccccccEEEEeCCch----HHHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 999999887665444699998765432 33456666788899988444444553
No 187
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.07 E-value=8e-11 Score=119.17 Aligned_cols=108 Identities=11% Similarity=0.066 Sum_probs=74.0
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCC-hHHHHHH---HHHHhhhhhcccccCCCCCCCccEEEEECCccc
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDIS-QKSLSRA---AKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITV 605 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDIS-eemLe~A---rkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaed 605 (770)
.++.+|||||||+|.++..|++.. +..+|+|+|+| +.|++.| ++++. ..+..++++.++|+++
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~------------~~~~~~v~~~~~d~~~ 89 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPS------------KGGLSNVVFVIAAAES 89 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGG------------GTCCSSEEEECCBTTB
T ss_pred CCCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHH------------HcCCCCeEEEEcCHHH
Confidence 357899999999999999998654 44899999999 7777776 44332 2345689999999998
Q ss_pred cCCCCCCccEEEeccccccCC-------hhHHHHHHHHHHHcccCC-EEEE-EecCC
Q 004178 606 FDSRLHGFDIGTCLEVIEHME-------EDEASQFGNIVLSSFRPR-ILIV-STPNY 653 (770)
Q Consensus 606 lp~~d~sFDlVVc~eVLEHL~-------~d~~~~fleeI~rvLKPG-~LII-STPN~ 653 (770)
++.. .||.|.+..+....+ .+. ..+++++.++|||| .+++ .+.+.
T Consensus 90 l~~~--~~d~v~~i~~~~~~~~~~~~~~~~~-~~~l~~~~r~LkpGG~l~i~~~~~~ 143 (225)
T 3p2e_A 90 LPFE--LKNIADSISILFPWGTLLEYVIKPN-RDILSNVADLAKKEAHFEFVTTYSD 143 (225)
T ss_dssp CCGG--GTTCEEEEEEESCCHHHHHHHHTTC-HHHHHHHHTTEEEEEEEEEEECCCC
T ss_pred hhhh--ccCeEEEEEEeCCCcHHhhhhhcch-HHHHHHHHHhcCCCcEEEEEEeccc
Confidence 8542 335555544432221 111 24556799999998 5555 44443
No 188
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.07 E-value=2.1e-09 Score=104.99 Aligned_cols=100 Identities=13% Similarity=0.184 Sum_probs=78.7
Q ss_pred hcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 528 KESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 528 ~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
...++.+|||+|||+|.++..+++.+. .+|+|+|+++.+++.|++++.. .+. ++++.++|+.+++
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~------------~~~-~~~~~~~d~~~~~ 110 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLLGA--KEVICVEVDKEAVDVLIENLGE------------FKG-KFKVFIGDVSEFN 110 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHTGG------------GTT-SEEEEESCGGGCC
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHH------------cCC-CEEEEECchHHcC
Confidence 445678999999999999999998752 5899999999999999987642 122 7999999998874
Q ss_pred CCCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEE
Q 004178 608 SRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILI 647 (770)
Q Consensus 608 ~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LI 647 (770)
..||+|++.-.+++........+++.+.+++ |.++
T Consensus 111 ---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~ 145 (207)
T 1wy7_A 111 ---SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVY 145 (207)
T ss_dssp ---CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEE
T ss_pred ---CCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEE
Confidence 4899999988877765434445666788888 6333
No 189
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.07 E-value=4.6e-10 Score=118.63 Aligned_cols=114 Identities=16% Similarity=0.117 Sum_probs=81.7
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC-
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS- 608 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~- 608 (770)
.++.+|||||||+|.++..+++.. +..+|+|+|+++.+++.|++++...... ...+++++..+|+.+...
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~--------~~~~~v~~~~~D~~~~~~~ 164 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRS--------LADPRATVRVGDGLAFVRQ 164 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGG--------GGCTTEEEEESCHHHHHHS
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcc--------cCCCcEEEEECcHHHHHHh
Confidence 457899999999999999999874 4579999999999999999876321110 123579999999887654
Q ss_pred -CCCCccEEEeccccccCChhHH--HHHHHHHHHcccCC-EEEEEecC
Q 004178 609 -RLHGFDIGTCLEVIEHMEEDEA--SQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 609 -~d~sFDlVVc~eVLEHL~~d~~--~~fleeI~rvLKPG-~LIISTPN 652 (770)
..+.||+|++....++.+...+ ..+.+.+.++|||| .+++...+
T Consensus 165 ~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 165 TPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp SCTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 3678999999766554432222 46667899999998 66665433
No 190
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.06 E-value=6.4e-10 Score=114.26 Aligned_cols=120 Identities=12% Similarity=0.060 Sum_probs=85.4
Q ss_pred hHHHHHHHHHHHHhh---cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCC
Q 004178 514 PLSKQRVEYALQHIK---ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPC 590 (770)
Q Consensus 514 PL~~qR~e~Il~~L~---~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr 590 (770)
|...+.-..+++.+. ..++.+|||+|||+|.++..+++..++..+|+|+|+++.|++...+....
T Consensus 56 ~~~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~------------ 123 (232)
T 3id6_C 56 AFRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR------------ 123 (232)
T ss_dssp TTTCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH------------
T ss_pred hHHHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh------------
Confidence 344444445555443 66789999999999999999998754567999999999987654433211
Q ss_pred CCCccEEEEECCccccCC---CCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEec
Q 004178 591 TDVKSAVLFDGSITVFDS---RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 591 ~~~~~Vef~~GDaedlp~---~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
..++.+.++|+..... ....||+|++.... + ++...+...+.++|||| .++++..
T Consensus 124 --r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~---~-~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 124 --RPNIFPLLADARFPQSYKSVVENVDVLYVDIAQ---P-DQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp --CTTEEEEECCTTCGGGTTTTCCCEEEEEECCCC---T-THHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred --cCCeEEEEcccccchhhhccccceEEEEecCCC---h-hHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 1479999999876432 24689999987554 2 55556666677799998 6666643
No 191
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.06 E-value=3e-10 Score=116.36 Aligned_cols=113 Identities=12% Similarity=0.077 Sum_probs=83.4
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
.++...+...++.+|||||||+|..+..+++..++..+|+++|+++.+++.|++++... +...+++++.
T Consensus 69 ~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~-----------g~~~~i~~~~ 137 (247)
T 1sui_A 69 QFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKA-----------GVDHKIDFRE 137 (247)
T ss_dssp HHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHT-----------TCGGGEEEEE
T ss_pred HHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-----------CCCCCeEEEE
Confidence 33434444556789999999999999999987533589999999999999999987531 1235799999
Q ss_pred CCcccc-CC------CCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEE
Q 004178 601 GSITVF-DS------RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVS 649 (770)
Q Consensus 601 GDaedl-p~------~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIS 649 (770)
+|+.+. +. ..+.||+|++..... ....+.+.+.++|||| .+++.
T Consensus 138 gda~~~l~~l~~~~~~~~~fD~V~~d~~~~-----~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 138 GPALPVLDEMIKDEKNHGSYDFIFVDADKD-----NYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp SCHHHHHHHHHHSGGGTTCBSEEEECSCST-----THHHHHHHHHHHBCTTCCEEEE
T ss_pred CCHHHHHHHHHhccCCCCCEEEEEEcCchH-----HHHHHHHHHHHhCCCCeEEEEe
Confidence 998764 21 147899999865422 2345666799999999 55554
No 192
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.06 E-value=2.9e-10 Score=116.68 Aligned_cols=99 Identities=20% Similarity=0.253 Sum_probs=78.7
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
.++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++.. .+.. +++.++|+.+. .+
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g---~~v~gvDi~~~~v~~a~~n~~~------------~~~~-v~~~~~d~~~~-~~ 181 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLG---GKALGVDIDPMVLPQAEANAKR------------NGVR-PRFLEGSLEAA-LP 181 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT---CEEEEEESCGGGHHHHHHHHHH------------TTCC-CEEEESCHHHH-GG
T ss_pred CCCCEEEEecCCCcHHHHHHHHhC---CeEEEEECCHHHHHHHHHHHHH------------cCCc-EEEEECChhhc-Cc
Confidence 457899999999999999999987 4999999999999999987742 2223 89999998763 23
Q ss_pred CCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEe
Q 004178 610 LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 610 d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIST 650 (770)
.+.||+|++....++ ...+.+.+.++|||| .++++.
T Consensus 182 ~~~fD~Vv~n~~~~~-----~~~~l~~~~~~LkpgG~lils~ 218 (254)
T 2nxc_A 182 FGPFDLLVANLYAEL-----HAALAPRYREALVPGGRALLTG 218 (254)
T ss_dssp GCCEEEEEEECCHHH-----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCEEEECCcHHH-----HHHHHHHHHHHcCCCCEEEEEe
Confidence 468999999766544 345667799999998 666654
No 193
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.06 E-value=4.1e-10 Score=120.22 Aligned_cols=101 Identities=10% Similarity=0.083 Sum_probs=82.1
Q ss_pred cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC
Q 004178 529 ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS 608 (770)
Q Consensus 529 ~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~ 608 (770)
..+..+|||||||+|.++..+++.. +..+++|+|+ +.+++.|++ ..++++..+|+.+ +.
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------------------~~~v~~~~~d~~~-~~ 244 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSG------------------SNNLTYVGGDMFT-SI 244 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------------------BTTEEEEECCTTT-CC
T ss_pred cccCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhccc------------------CCCcEEEeccccC-CC
Confidence 3456899999999999999999875 4478999999 999877643 1359999999966 43
Q ss_pred CCCCccEEEeccccccCChhHHHHHHHHHHHcccC---C-EEEEEecC
Q 004178 609 RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRP---R-ILIVSTPN 652 (770)
Q Consensus 609 ~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKP---G-~LIISTPN 652 (770)
+ .||+|++..++||++++....+++++.++||| | .++|..+.
T Consensus 245 p--~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 290 (352)
T 1fp2_A 245 P--NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMV 290 (352)
T ss_dssp C--CCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECE
T ss_pred C--CccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEee
Confidence 3 39999999999999966666778889999999 8 77776543
No 194
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.05 E-value=1.4e-09 Score=111.43 Aligned_cols=117 Identities=13% Similarity=0.094 Sum_probs=87.8
Q ss_pred HHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEE
Q 004178 518 QRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAV 597 (770)
Q Consensus 518 qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Ve 597 (770)
.|++.+.+.+.. +.+|||||||+|.++..+++.+ +..+|+|+|+++.+++.|++++... +...+++
T Consensus 4 ~RL~~l~~~v~~--g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~-----------gl~~~i~ 69 (225)
T 3kr9_A 4 KRLELVASFVSQ--GAILLDVGSDHAYLPIELVERG-QIKSAIAGEVVEGPYQSAVKNVEAH-----------GLKEKIQ 69 (225)
T ss_dssp HHHHHHHTTSCT--TEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHT-----------TCTTTEE
T ss_pred HHHHHHHHhCCC--CCEEEEeCCCcHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHc-----------CCCceEE
Confidence 578888877764 6899999999999999999986 5579999999999999999988532 1223699
Q ss_pred EEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 598 LFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 598 f~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
+..+|+.+.-.....||+|+..++- .+....+++.....|+|+ .+++ .|+.
T Consensus 70 ~~~~d~l~~l~~~~~~D~IviaG~G----g~~i~~Il~~~~~~L~~~~~lVl-q~~~ 121 (225)
T 3kr9_A 70 VRLANGLAAFEETDQVSVITIAGMG----GRLIARILEEGLGKLANVERLIL-QPNN 121 (225)
T ss_dssp EEECSGGGGCCGGGCCCEEEEEEEC----HHHHHHHHHHTGGGCTTCCEEEE-EESS
T ss_pred EEECchhhhcccCcCCCEEEEcCCC----hHHHHHHHHHHHHHhCCCCEEEE-ECCC
Confidence 9999985432222369999876543 233456677788999998 5554 5553
No 195
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.04 E-value=3.4e-10 Score=120.08 Aligned_cols=105 Identities=11% Similarity=0.069 Sum_probs=73.7
Q ss_pred HHHHHHHhhcC-CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEE
Q 004178 520 VEYALQHIKES-CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVL 598 (770)
Q Consensus 520 ~e~Il~~L~~~-~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef 598 (770)
+..+++.+... .+.+|||+|||+|.++..|++.+ ..+|+|+|+++.||+.+.++- +++..
T Consensus 73 l~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~g--a~~V~aVDvs~~mL~~a~r~~-----------------~rv~~ 133 (291)
T 3hp7_A 73 LEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNG--AKLVYAVDVGTNQLVWKLRQD-----------------DRVRS 133 (291)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTT--CSEEEEECSSSSCSCHHHHTC-----------------TTEEE
T ss_pred HHHHHHhcCCCccccEEEecCCCccHHHHHHHhCC--CCEEEEEECCHHHHHHHHHhC-----------------cccce
Confidence 33444555443 56799999999999999998885 269999999999999864411 23322
Q ss_pred E-ECCccccCC---CCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEE
Q 004178 599 F-DGSITVFDS---RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIV 648 (770)
Q Consensus 599 ~-~GDaedlp~---~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LII 648 (770)
. ..++..++. +...||+|+|..+++++. .++.++.++|||| .+++
T Consensus 134 ~~~~ni~~l~~~~l~~~~fD~v~~d~sf~sl~-----~vL~e~~rvLkpGG~lv~ 183 (291)
T 3hp7_A 134 MEQYNFRYAEPVDFTEGLPSFASIDVSFISLN-----LILPALAKILVDGGQVVA 183 (291)
T ss_dssp ECSCCGGGCCGGGCTTCCCSEEEECCSSSCGG-----GTHHHHHHHSCTTCEEEE
T ss_pred ecccCceecchhhCCCCCCCEEEEEeeHhhHH-----HHHHHHHHHcCcCCEEEE
Confidence 2 334444332 234599999988888774 4556799999998 4444
No 196
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.04 E-value=7.3e-10 Score=123.44 Aligned_cols=117 Identities=13% Similarity=0.032 Sum_probs=84.1
Q ss_pred HHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHH-------HHHHhhhhhcccccCCC
Q 004178 517 KQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRA-------AKIIHSKLSKKLDAAVP 589 (770)
Q Consensus 517 ~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~A-------rkrL~~~~s~~~~~l~p 589 (770)
...+..+++.+...++.+|||||||+|.++..+++..+ ..+|+|+|+++.+++.| ++++..
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~----------- 295 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKL----------- 295 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHH-----------
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHH-----------
Confidence 33444566667777889999999999999999998642 35899999999999998 555432
Q ss_pred CCC--CccEEEEECCcccc--C--CCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEE
Q 004178 590 CTD--VKSAVLFDGSITVF--D--SRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVS 649 (770)
Q Consensus 590 r~~--~~~Vef~~GDaedl--p--~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIS 649 (770)
.+ ..++++.++|.... + ...+.||+|++..++ +.+ +. ...++++.++|||| .+++.
T Consensus 296 -~Gl~~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~-d~-~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 296 -YGMRLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFL-FDE-DL-NKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp -TTBCCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTT-CCH-HH-HHHHHHHHTTCCTTCEEEES
T ss_pred -cCCCCCceEEEEcCccccccccccccCCCCEEEEeCcc-ccc-cH-HHHHHHHHHhCCCCeEEEEe
Confidence 12 35899999864421 1 124689999988766 332 33 34446799999999 55554
No 197
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.03 E-value=1.4e-09 Score=110.39 Aligned_cols=112 Identities=12% Similarity=0.066 Sum_probs=82.7
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
++...+...++.+|||||||+|..+..+++..++..+|+++|+++.+++.|++++... +...++++..+
T Consensus 61 ~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-----------g~~~~i~~~~g 129 (237)
T 3c3y_A 61 LMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKA-----------GVEHKINFIES 129 (237)
T ss_dssp HHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT-----------TCGGGEEEEES
T ss_pred HHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-----------CCCCcEEEEEc
Confidence 3434444556889999999999999999987533589999999999999999987531 12347999999
Q ss_pred Ccccc-CC------CCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEE
Q 004178 602 SITVF-DS------RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVS 649 (770)
Q Consensus 602 Daedl-p~------~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIS 649 (770)
|+.+. +. ..+.||+|++.... .....+.+.+.++|+|| .+++.
T Consensus 130 da~~~l~~l~~~~~~~~~fD~I~~d~~~-----~~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 130 DAMLALDNLLQGQESEGSYDFGFVDADK-----PNYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp CHHHHHHHHHHSTTCTTCEEEEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred CHHHHHHHHHhccCCCCCcCEEEECCch-----HHHHHHHHHHHHhcCCCeEEEEe
Confidence 98763 21 14789999876432 23345667799999999 55554
No 198
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.02 E-value=4.2e-10 Score=118.08 Aligned_cols=122 Identities=15% Similarity=0.168 Sum_probs=96.6
Q ss_pred hHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCC
Q 004178 514 PLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDV 593 (770)
Q Consensus 514 PL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~ 593 (770)
|....-|..+.+.+ ..+.+|||||||.|-++..++... +..+|+|+|+++.|++.+++++.. .+
T Consensus 117 p~lD~fY~~i~~~i--~~p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~------------~g- 180 (281)
T 3lcv_B 117 PHLDEFYRELFRHL--PRPNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTR------------LN- 180 (281)
T ss_dssp GGHHHHHHHHGGGS--CCCSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHH------------TT-
T ss_pred HhHHHHHHHHHhcc--CCCceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHh------------cC-
Confidence 33444455555555 347899999999999999888775 568999999999999999998742 12
Q ss_pred ccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEecCC
Q 004178 594 KSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPNY 653 (770)
Q Consensus 594 ~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTPN~ 653 (770)
.+.++.+.|....++ .+.||+|++.-+++|+++....... .++..|+|+.++|+.|-.
T Consensus 181 ~~~~~~v~D~~~~~p-~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~k 238 (281)
T 3lcv_B 181 VPHRTNVADLLEDRL-DEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTK 238 (281)
T ss_dssp CCEEEEECCTTTSCC-CSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC
T ss_pred CCceEEEeeecccCC-CCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccch
Confidence 347888899776554 4789999999999999866555555 599999999999998874
No 199
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.02 E-value=3.8e-10 Score=114.25 Aligned_cols=106 Identities=9% Similarity=-0.004 Sum_probs=71.5
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc---C
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF---D 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl---p 607 (770)
++.+|||+|||+|.++..+++.. +..+|+|+|+++.|++.|++++... ....++++.++|+.+. +
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~-----------~~~~~v~~~~~d~~~~~~~~ 132 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQN-----------NLSDLIKVVKVPQKTLLMDA 132 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHT-----------TCTTTEEEEECCTTCSSTTT
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHc-----------CCCccEEEEEcchhhhhhhh
Confidence 56799999999999998888763 2379999999999999999987531 1123599999998762 2
Q ss_pred CC---CCCccEEEeccccccCCh-------------hHHHHHHHHHHHcccCC-EEEE
Q 004178 608 SR---LHGFDIGTCLEVIEHMEE-------------DEASQFGNIVLSSFRPR-ILIV 648 (770)
Q Consensus 608 ~~---d~sFDlVVc~eVLEHL~~-------------d~~~~fleeI~rvLKPG-~LII 648 (770)
.. +..||+|+|.-..++... ++...+...+.++|||| .+.+
T Consensus 133 ~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 133 LKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp STTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred hhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 23 258999999854443320 11224445688999997 4433
No 200
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.00 E-value=8.8e-10 Score=119.62 Aligned_cols=124 Identities=17% Similarity=0.147 Sum_probs=90.5
Q ss_pred hHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCC
Q 004178 514 PLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDV 593 (770)
Q Consensus 514 PL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~ 593 (770)
|+.+.....++... ..++.+|||+|||+|.++..++..+ +..+|+|+|+++.|++.|++++... +..
T Consensus 201 ~l~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~-----------gl~ 267 (373)
T 3tm4_A 201 HLKASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAA-----------GVL 267 (373)
T ss_dssp CCCHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHT-----------TCG
T ss_pred CccHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHc-----------CCC
Confidence 44444444555555 5678899999999999999999887 3348999999999999999987531 122
Q ss_pred ccEEEEECCccccCCCCCCccEEEecccccc-------CChhHHHHHHHHHHHcccCCEEEEEecC
Q 004178 594 KSAVLFDGSITVFDSRLHGFDIGTCLEVIEH-------MEEDEASQFGNIVLSSFRPRILIVSTPN 652 (770)
Q Consensus 594 ~~Vef~~GDaedlp~~d~sFDlVVc~eVLEH-------L~~d~~~~fleeI~rvLKPG~LIISTPN 652 (770)
.++++.++|+.+++..++.||+|++.-.... +. +....+.+.+.++| +|.+++.+++
T Consensus 268 ~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~-~ly~~~~~~l~r~l-~g~~~~i~~~ 331 (373)
T 3tm4_A 268 DKIKFIQGDATQLSQYVDSVDFAISNLPYGLKIGKKSMIP-DLYMKFFNELAKVL-EKRGVFITTE 331 (373)
T ss_dssp GGCEEEECCGGGGGGTCSCEEEEEEECCCC------CCHH-HHHHHHHHHHHHHE-EEEEEEEESC
T ss_pred CceEEEECChhhCCcccCCcCEEEECCCCCcccCcchhHH-HHHHHHHHHHHHHc-CCeEEEEECC
Confidence 5799999999999887789999999644321 21 22356777788888 5544444444
No 201
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.00 E-value=9.5e-10 Score=114.25 Aligned_cols=105 Identities=16% Similarity=0.178 Sum_probs=87.1
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
..+.+|||||||.|-++..++ + ..+|+|+||++.|++.+++++.. .+ .+..+.++|....+++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~--~~~y~a~DId~~~i~~ar~~~~~------------~g-~~~~~~v~D~~~~~~~ 166 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--G--IASVWGCDIHQGLGDVITPFARE------------KD-WDFTFALQDVLCAPPA 166 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--T--CSEEEEEESBHHHHHHHHHHHHH------------TT-CEEEEEECCTTTSCCC
T ss_pred CCCCeEEEecCCccHHHHHhc--c--CCeEEEEeCCHHHHHHHHHHHHh------------cC-CCceEEEeecccCCCC
Confidence 468899999999999999877 2 38999999999999999987642 12 5789999998877765
Q ss_pred CCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEecCC
Q 004178 610 LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPNY 653 (770)
Q Consensus 610 d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTPN~ 653 (770)
+.||+|++.-++||++..+..... .+...|+++.++|+.|..
T Consensus 167 -~~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfPtk 208 (253)
T 3frh_A 167 -EAGDLALIFKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFPTR 208 (253)
T ss_dssp -CBCSEEEEESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEECC
T ss_pred -CCcchHHHHHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcChH
Confidence 589999999999999855555555 588899999999999853
No 202
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.00 E-value=1.4e-09 Score=114.97 Aligned_cols=113 Identities=17% Similarity=0.132 Sum_probs=79.0
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC-C
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD-S 608 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp-~ 608 (770)
.++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++...... ....++++++.+|+.+.. .
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~~-------~~~~~rv~~~~~D~~~~l~~ 153 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAG-------SYDDPRFKLVIDDGVNFVNQ 153 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHSS-------CTTCTTCCEECSCSCC---C
T ss_pred CCCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhcccc-------cccCCceEEEEChHHHHHhh
Confidence 457899999999999999999875 4589999999999999999976432100 012358999999987643 3
Q ss_pred CCCCccEEEeccccccCChhHH--HHHHHHHHHcccCC-EEEEEe
Q 004178 609 RLHGFDIGTCLEVIEHMEEDEA--SQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 609 ~d~sFDlVVc~eVLEHL~~d~~--~~fleeI~rvLKPG-~LIIST 650 (770)
..+.||+|++...-...+...+ ..|.+.+.++|+|| ++++.+
T Consensus 154 ~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 154 TSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CCCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 4578999999544332222211 45777899999998 555543
No 203
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.00 E-value=6.2e-10 Score=115.43 Aligned_cols=118 Identities=14% Similarity=0.127 Sum_probs=86.0
Q ss_pred HHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECC
Q 004178 523 ALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGS 602 (770)
Q Consensus 523 Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GD 602 (770)
+...+...++.+|||+|||+|..+..+++..+...+|+|+|+++.+++.+++++.. .+..++++.++|
T Consensus 75 ~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~------------~g~~~v~~~~~D 142 (274)
T 3ajd_A 75 PPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINR------------MGVLNTIIINAD 142 (274)
T ss_dssp HHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHH------------TTCCSEEEEESC
T ss_pred HHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHH------------hCCCcEEEEeCC
Confidence 33455666788999999999999999987542337999999999999999988753 234589999999
Q ss_pred ccccCC----CCCCccEEEec------cccccCC---h-------hHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 603 ITVFDS----RLHGFDIGTCL------EVIEHME---E-------DEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 603 aedlp~----~d~sFDlVVc~------eVLEHL~---~-------d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
+.+++. ..+.||+|++. +++.+-+ . +....+++.+.++|||| .++++|..
T Consensus 143 ~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 143 MRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCS 213 (274)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred hHhcchhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 987754 25789999986 3333110 0 12345667799999998 77777765
No 204
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.99 E-value=8.7e-10 Score=114.48 Aligned_cols=103 Identities=11% Similarity=0.072 Sum_probs=80.2
Q ss_pred cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC
Q 004178 529 ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS 608 (770)
Q Consensus 529 ~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~ 608 (770)
..++.+|||+|||+|.++..+++.. +..+|+|+|+++.+++.|++++.. .+..++.++++|+.+. .
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~-~~~~V~~vD~s~~av~~a~~n~~~------------n~l~~~~~~~~d~~~~-~ 182 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYS-KPKLVYAIEKNPTAYHYLCENIKL------------NKLNNVIPILADNRDV-E 182 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHT-CCSEEEEEECCHHHHHHHHHHHHH------------TTCSSEEEEESCGGGC-C
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHH------------cCCCCEEEEECChHHc-C
Confidence 3467899999999999999999875 236999999999999999998752 2445789999999888 3
Q ss_pred CCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEec
Q 004178 609 RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 609 ~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
....||+|++.... ....+...+.+.|+|| .+++++.
T Consensus 183 ~~~~~D~Vi~d~p~------~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 183 LKDVADRVIMGYVH------KTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp CTTCEEEEEECCCS------SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred ccCCceEEEECCcc------cHHHHHHHHHHHcCCCCEEEEEEc
Confidence 35789999887653 1123445688999998 6666543
No 205
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.98 E-value=5.6e-10 Score=106.74 Aligned_cols=90 Identities=13% Similarity=0.048 Sum_probs=72.3
Q ss_pred hcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 528 KESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 528 ~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
...++.+|||+|||. +++|+|+.|++.|+++.. .++++.++|+++++
T Consensus 9 g~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~----------------~~~~~~~~d~~~~~ 55 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTG----------------NEGRVSVENIKQLL 55 (176)
T ss_dssp TCCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTT----------------TTSEEEEEEGGGGG
T ss_pred CCCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcc----------------cCcEEEEechhcCc
Confidence 455789999999985 239999999999988641 14899999999988
Q ss_pred C---CCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEec
Q 004178 608 S---RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 608 ~---~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
+ ++++||+|+|..++||+.++. ..++++++++|||| .+++..|
T Consensus 56 ~~~~~~~~fD~V~~~~~l~~~~~~~-~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 56 QSAHKESSFDIILSGLVPGSTTLHS-AEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp GGCCCSSCEEEEEECCSTTCCCCCC-HHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccCCCCCEeEEEECChhhhcccCH-HHHHHHHHHHCCCCEEEEEEcc
Confidence 7 678999999999999993243 45566799999999 7777544
No 206
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.98 E-value=3.2e-09 Score=102.99 Aligned_cols=100 Identities=17% Similarity=0.213 Sum_probs=74.3
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCC-CceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC-
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTA-LEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD- 607 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp-~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp- 607 (770)
.++.+|||+|||+|.++..+++..++ ..+|+|+|+++.. ..+++++.++|+.+.+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------------------~~~~v~~~~~d~~~~~~ 77 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------------------PIPNVYFIQGEIGKDNM 77 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------------------CCTTCEEEECCTTTTSS
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------------------CCCCceEEEccccchhh
Confidence 45679999999999999999987522 4799999999821 1136899999998766
Q ss_pred ------------------------CCCCCccEEEeccccccCCh---hHH------HHHHHHHHHcccCC-EEEEEecC
Q 004178 608 ------------------------SRLHGFDIGTCLEVIEHMEE---DEA------SQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 608 ------------------------~~d~sFDlVVc~eVLEHL~~---d~~------~~fleeI~rvLKPG-~LIISTPN 652 (770)
+....||+|++..++++... +.. ..+++++.++|||| .+++.+..
T Consensus 78 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 78 NNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp CCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 34578999999888776421 111 13566799999998 66665544
No 207
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.97 E-value=6.5e-10 Score=113.15 Aligned_cols=99 Identities=13% Similarity=0.135 Sum_probs=74.7
Q ss_pred CCCCEEEEEcCccchHHHHHhcC---CCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDY---PTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF 606 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~---ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl 606 (770)
.++.+|||||||+|..+..|++. .++..+|+|+|+++.|++.|+. + ..+++++++|+.+.
T Consensus 80 ~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~-~----------------~~~v~~~~gD~~~~ 142 (236)
T 2bm8_A 80 LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS-D----------------MENITLHQGDCSDL 142 (236)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG-G----------------CTTEEEEECCSSCS
T ss_pred cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc-c----------------CCceEEEECcchhH
Confidence 35689999999999999999886 2245899999999999988752 1 14799999999874
Q ss_pred ---CCCC-CCccEEEeccccccCChhHHHHHHHHHHH-cccCC-EEEEEe
Q 004178 607 ---DSRL-HGFDIGTCLEVIEHMEEDEASQFGNIVLS-SFRPR-ILIVST 650 (770)
Q Consensus 607 ---p~~d-~sFDlVVc~eVLEHL~~d~~~~fleeI~r-vLKPG-~LIIST 650 (770)
+... ..||+|++... |. +. ..++.++.+ +|||| .+++..
T Consensus 143 ~~l~~~~~~~fD~I~~d~~--~~--~~-~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 143 TTFEHLREMAHPLIFIDNA--HA--NT-FNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp GGGGGGSSSCSSEEEEESS--CS--SH-HHHHHHHHHHTCCTTCEEEECS
T ss_pred HHHHhhccCCCCEEEECCc--hH--hH-HHHHHHHHHhhCCCCCEEEEEe
Confidence 4333 47999998665 43 23 345556897 99999 666654
No 208
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.96 E-value=2.6e-09 Score=111.82 Aligned_cols=115 Identities=12% Similarity=0.195 Sum_probs=83.1
Q ss_pred cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc-C
Q 004178 529 ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF-D 607 (770)
Q Consensus 529 ~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl-p 607 (770)
..++.+|||||||+|.++..+++.. +..+|+++|+++.+++.|++++...... ...+++++..+|+.+. +
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~--------~~~~~v~~~~~D~~~~l~ 146 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCG--------YEDKRVNVFIEDASKFLE 146 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGG--------GGSTTEEEEESCHHHHHH
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccc--------cCCCcEEEEECChHHHHH
Confidence 3457899999999999999999875 4589999999999999999876321000 0135899999998763 2
Q ss_pred CCCCCccEEEeccccccCChhHH--HHHHHHHHHcccCC-EEEEEecC
Q 004178 608 SRLHGFDIGTCLEVIEHMEEDEA--SQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 608 ~~d~sFDlVVc~eVLEHL~~d~~--~~fleeI~rvLKPG-~LIISTPN 652 (770)
...+.||+|++....++.+...+ ..+.+.+.++|+|| .+++.+.+
T Consensus 147 ~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 147 NVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp HCCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred hCCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 23578999998544333222222 46677899999998 66655443
No 209
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.96 E-value=2.1e-09 Score=117.76 Aligned_cols=106 Identities=13% Similarity=0.077 Sum_probs=78.5
Q ss_pred hcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 528 KESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 528 ~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
...++++|||||||+|.++...++.+. .+|+|||.|+ |++.|++.+.. .+...+|++++++++++.
T Consensus 80 ~~~~~k~VLDvG~GtGiLs~~Aa~aGA--~~V~ave~s~-~~~~a~~~~~~-----------n~~~~~i~~i~~~~~~~~ 145 (376)
T 4hc4_A 80 AALRGKTVLDVGAGTGILSIFCAQAGA--RRVYAVEASA-IWQQAREVVRF-----------NGLEDRVHVLPGPVETVE 145 (376)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHHTTC--SEEEEEECST-THHHHHHHHHH-----------TTCTTTEEEEESCTTTCC
T ss_pred HhcCCCEEEEeCCCccHHHHHHHHhCC--CEEEEEeChH-HHHHHHHHHHH-----------cCCCceEEEEeeeeeeec
Confidence 334689999999999999998888873 6899999996 88889886643 123357999999999987
Q ss_pred CCCCCccEEEeccccccCC-hhHHHHHHHHHHHcccCCEEEE
Q 004178 608 SRLHGFDIGTCLEVIEHME-EDEASQFGNIVLSSFRPRILIV 648 (770)
Q Consensus 608 ~~d~sFDlVVc~eVLEHL~-~d~~~~fleeI~rvLKPG~LII 648 (770)
.+ ..||+||+-..-..+. +..+..+.....++||||.++|
T Consensus 146 lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 146 LP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp CS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred CC-ccccEEEeecccccccccchhhhHHHHHHhhCCCCceEC
Confidence 65 6899999843322222 1234566666789999984433
No 210
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.96 E-value=1e-09 Score=117.47 Aligned_cols=99 Identities=12% Similarity=0.095 Sum_probs=80.9
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
.+..+|||||||+|.++..+++.. +..+++++|+ +.+++.|++ ..++++..+|+.+ +.+
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------------------~~~v~~~~~d~~~-~~~ 250 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTG------------------NENLNFVGGDMFK-SIP 250 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCC------------------CSSEEEEECCTTT-CCC
T ss_pred cCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhccc------------------CCCcEEEeCccCC-CCC
Confidence 356899999999999999999876 4578999999 788866532 1359999999977 443
Q ss_pred CCCccEEEeccccccCChhHHHHHHHHHHHcccC---C-EEEEEec
Q 004178 610 LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRP---R-ILIVSTP 651 (770)
Q Consensus 610 d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKP---G-~LIISTP 651 (770)
.||+|++..++||++++....+++++.++||| | .++|..+
T Consensus 251 --~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 251 --SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp --CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred --CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 59999999999999966666788889999999 7 6666543
No 211
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.95 E-value=9.9e-09 Score=111.88 Aligned_cols=106 Identities=15% Similarity=0.114 Sum_probs=79.9
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCC-c-cEEEEECCccccC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDV-K-SAVLFDGSITVFD 607 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~-~-~Vef~~GDaedlp 607 (770)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.|++++.. .+. . +++++++|+.+..
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~------------ngl~~~~v~~~~~D~~~~~ 284 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVEL------------NKLDLSKAEFVRDDVFKLL 284 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHH------------TTCCGGGEEEEESCHHHHH
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHH------------cCCCccceEEEECCHHHHH
Confidence 467899999999999999999875 26999999999999999998742 233 3 7999999987753
Q ss_pred C----CCCCccEEEecc---------ccccCChhHHHHHHHHHHHcccCC-EEEEEec
Q 004178 608 S----RLHGFDIGTCLE---------VIEHMEEDEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 608 ~----~d~sFDlVVc~e---------VLEHL~~d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
. ....||+|++.- +.++.. ....+...+.+.|+|| .+++++.
T Consensus 285 ~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 285 RTYRDRGEKFDVIVMDPPKFVENKSQLMGACR--GYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp HHHHHTTCCEEEEEECCSSTTTCSSSSSCCCT--HHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHhcCCCCCEEEECCCCCCCChhHHHHHHH--HHHHHHHHHHHhcCCCcEEEEEeC
Confidence 2 146899999852 222222 3445556799999999 6666553
No 212
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.94 E-value=3.9e-09 Score=107.71 Aligned_cols=107 Identities=11% Similarity=0.087 Sum_probs=68.1
Q ss_pred HHHHHHHhhc-CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEE
Q 004178 520 VEYALQHIKE-SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVL 598 (770)
Q Consensus 520 ~e~Il~~L~~-~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef 598 (770)
++.+++.+.. ..+.+|||||||+|.++..|++.+. .+|+|+|+|+.|++.|+++.. ++..
T Consensus 25 L~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~--~~V~gvDis~~ml~~a~~~~~-----------------~~~~ 85 (232)
T 3opn_A 25 LEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGA--KLVYALDVGTNQLAWKIRSDE-----------------RVVV 85 (232)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTC--SEEEEECSSCCCCCHHHHTCT-----------------TEEE
T ss_pred HHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCC--CEEEEEcCCHHHHHHHHHhCc-----------------cccc
Confidence 3444455543 3567999999999999999998852 599999999999999876321 1111
Q ss_pred E-ECCccccC---CCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEe
Q 004178 599 F-DGSITVFD---SRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 599 ~-~GDaedlp---~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIST 650 (770)
. ..++.... .....||.+.+..++.++. .+++++.++|||| .+++.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~l~-----~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 86 MEQFNFRNAVLADFEQGRPSFTSIDVSFISLD-----LILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp ECSCCGGGCCGGGCCSCCCSEEEECCSSSCGG-----GTHHHHHHHSCTTCEEEEEE
T ss_pred cccceEEEeCHhHcCcCCCCEEEEEEEhhhHH-----HHHHHHHHhccCCCEEEEEE
Confidence 1 11221111 1111256666655555553 4556799999998 555543
No 213
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.94 E-value=6.1e-09 Score=113.67 Aligned_cols=108 Identities=10% Similarity=0.035 Sum_probs=78.4
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCc--cEEEEECCccccC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVK--SAVLFDGSITVFD 607 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~--~Vef~~GDaedlp 607 (770)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|++++.. .+.. +++++++|+.+..
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g--a~~V~~vD~s~~al~~A~~N~~~------------n~~~~~~v~~~~~D~~~~l 276 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG--AMATTSVDLAKRSRALSLAHFEA------------NHLDMANHQLVVMDVFDYF 276 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT--BSEEEEEESCTTHHHHHHHHHHH------------TTCCCTTEEEEESCHHHHH
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHH------------cCCCccceEEEECCHHHHH
Confidence 457899999999999999999865 25899999999999999998752 2333 7999999987632
Q ss_pred C----CCCCccEEEecccc-----ccCCh--hHHHHHHHHHHHcccCC-EEEEEec
Q 004178 608 S----RLHGFDIGTCLEVI-----EHMEE--DEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 608 ~----~d~sFDlVVc~eVL-----EHL~~--d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
. ....||+|++.--. .++.. .....+...+.++|+|| .+++++.
T Consensus 277 ~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 277 KYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp HHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 1 23589999984211 22221 22334556788999999 6666553
No 214
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.94 E-value=8e-09 Score=110.33 Aligned_cols=119 Identities=17% Similarity=0.187 Sum_probs=87.8
Q ss_pred HHHHHHh-hcCCCCEEEEEcCccchHHHHHhcCCCC----CceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCcc
Q 004178 521 EYALQHI-KESCATTLVDFGCGSGSLLDSLLDYPTA----LEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKS 595 (770)
Q Consensus 521 e~Il~~L-~~~~~~rVLDIGCGtG~ll~~LAk~ggp----~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~ 595 (770)
..+++.+ ...++.+|||+|||+|.++..+++.... ..+++|+|+++.+++.|+.++... +. +
T Consensus 119 ~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~------------g~-~ 185 (344)
T 2f8l_A 119 AYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ------------RQ-K 185 (344)
T ss_dssp HHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH------------TC-C
T ss_pred HHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC------------CC-C
Confidence 4444443 3345689999999999999988866421 168999999999999999876421 22 6
Q ss_pred EEEEECCccccCCCCCCccEEEeccccccCChhHH----------------HHHHHHHHHcccCC-EEEEEecCC
Q 004178 596 AVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEA----------------SQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 596 Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~----------------~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
+.+.++|..... ....||+|++.-.+.+++.++. ..|++.+.+.|+|| .+++.+|+.
T Consensus 186 ~~i~~~D~l~~~-~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 186 MTLLHQDGLANL-LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp CEEEESCTTSCC-CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred ceEEECCCCCcc-ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 889999976643 3478999999877766653321 25677899999998 888888873
No 215
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.93 E-value=4.8e-09 Score=112.90 Aligned_cols=113 Identities=14% Similarity=0.148 Sum_probs=81.1
Q ss_pred cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc-C
Q 004178 529 ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF-D 607 (770)
Q Consensus 529 ~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl-p 607 (770)
...+.+|||||||+|.++..|++.. +..+|+++|+++.+++.|++++......+ ..++++++++|+.+. +
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl--------~~~rv~~~~~D~~~~l~ 188 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGY--------EDPRVNLVIGDGVAFLK 188 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGG--------GSTTEEEEESCHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhcccc--------CCCcEEEEECCHHHHHH
Confidence 3467899999999999999999875 45799999999999999998764321110 125799999998764 2
Q ss_pred -CCCCCccEEEeccccccCChhH--HHHHHHHHHHcccCC-EEEEEe
Q 004178 608 -SRLHGFDIGTCLEVIEHMEEDE--ASQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 608 -~~d~sFDlVVc~eVLEHL~~d~--~~~fleeI~rvLKPG-~LIIST 650 (770)
...+.||+|++...-.+-..+. ...+.+.+.++|+|| .+++.+
T Consensus 189 ~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 189 NAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp TSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred hccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 2347899999854321111111 246667899999999 555543
No 216
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.93 E-value=1e-09 Score=107.76 Aligned_cols=93 Identities=14% Similarity=0.233 Sum_probs=71.6
Q ss_pred HHHHhh-cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 523 ALQHIK-ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 523 Il~~L~-~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
+++.+. ..++.+|||+|||+|.++..++ .+|+|+|+++. ++++.++
T Consensus 58 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~---------------------------~~~~~~~ 104 (215)
T 2zfu_A 58 IARDLRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL---------------------------DPRVTVC 104 (215)
T ss_dssp HHHHHHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS---------------------------STTEEES
T ss_pred HHHHHhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC---------------------------CceEEEe
Confidence 334443 3456899999999999998773 57999999976 1356788
Q ss_pred CccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEec
Q 004178 602 SITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 602 Daedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTP 651 (770)
|+.++++.++.||+|++..++|| . + ...+++++.++|+|| .+++..+
T Consensus 105 d~~~~~~~~~~fD~v~~~~~l~~-~-~-~~~~l~~~~~~L~~gG~l~i~~~ 152 (215)
T 2zfu_A 105 DMAQVPLEDESVDVAVFCLSLMG-T-N-IRDFLEEANRVLKPGGLLKVAEV 152 (215)
T ss_dssp CTTSCSCCTTCEEEEEEESCCCS-S-C-HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccccCCCCCCCEeEEEEehhccc-c-C-HHHHHHHHHHhCCCCeEEEEEEc
Confidence 99888877789999999999965 3 3 345566799999998 6666653
No 217
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.93 E-value=3.6e-09 Score=112.40 Aligned_cols=112 Identities=19% Similarity=0.203 Sum_probs=81.8
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc-CC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF-DS 608 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl-p~ 608 (770)
..+.+|||||||+|.++..+++.. +..+|+++|+++.+++.|++++...... .-..++++++.+|+.+. +.
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~-------~~~~~~v~~~~~D~~~~l~~ 147 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQG-------AFDDPRAVLVIDDARAYLER 147 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTT-------GGGCTTEEEEESCHHHHHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccc-------cccCCceEEEEchHHHHHHh
Confidence 457899999999999999999875 3579999999999999999876421100 00135899999998763 33
Q ss_pred CCCCccEEEecccccc---CChhH--HHHHHHHHHHcccCC-EEEEE
Q 004178 609 RLHGFDIGTCLEVIEH---MEEDE--ASQFGNIVLSSFRPR-ILIVS 649 (770)
Q Consensus 609 ~d~sFDlVVc~eVLEH---L~~d~--~~~fleeI~rvLKPG-~LIIS 649 (770)
..+.||+|++....++ -+... ...+.+.+.++|||| .+++.
T Consensus 148 ~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 148 TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred cCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 4578999999765543 11111 246667899999998 55554
No 218
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.93 E-value=3.3e-09 Score=112.47 Aligned_cols=113 Identities=12% Similarity=0.191 Sum_probs=80.0
Q ss_pred cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccc-cC
Q 004178 529 ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITV-FD 607 (770)
Q Consensus 529 ~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaed-lp 607 (770)
...+.+|||||||+|.++..+++.. +..+|+++|+++.+++.|++++....... ..++++++.+|+.+ ++
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~--------~~~rv~v~~~Da~~~l~ 163 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGY--------SSSKLTLHVGDGFEFMK 163 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGG--------GCTTEEEEESCHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhccc--------CCCcEEEEECcHHHHHh
Confidence 3467899999999999999999875 45799999999999999998764311110 13579999999876 33
Q ss_pred CCCCCccEEEeccccccCChh--HHHHHHHHHHHcccCC-EEEEEe
Q 004178 608 SRLHGFDIGTCLEVIEHMEED--EASQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 608 ~~d~sFDlVVc~eVLEHL~~d--~~~~fleeI~rvLKPG-~LIIST 650 (770)
...+.||+|++....+..+.. ....+.+.+.++|+|| .+++.+
T Consensus 164 ~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 164 QNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp TCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred hCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 345789999985443221111 1235667899999999 666554
No 219
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.92 E-value=4e-09 Score=110.04 Aligned_cols=113 Identities=16% Similarity=0.167 Sum_probs=81.3
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc-CC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF-DS 608 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl-p~ 608 (770)
..+.+|||||||+|.++..+++.. +..+|+++|+++.+++.|++++...... ...++++++.+|+.+. +.
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~--------~~~~rv~v~~~D~~~~l~~ 144 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGK--------LDDPRVDVQVDDGFMHIAK 144 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTT--------TTSTTEEEEESCSHHHHHT
T ss_pred CCCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccc--------cCCCceEEEECcHHHHHhh
Confidence 357899999999999999999874 3579999999999999999876432110 1235899999998763 33
Q ss_pred CCCCccEEEeccccccCChhH--HHHHHHHHHHcccCC-EEEEEec
Q 004178 609 RLHGFDIGTCLEVIEHMEEDE--ASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 609 ~d~sFDlVVc~eVLEHL~~d~--~~~fleeI~rvLKPG-~LIISTP 651 (770)
..+.||+|++....++.+... ...+.+.+.++|+|| .+++.+.
T Consensus 145 ~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 145 SENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp CCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred CCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 357899999954332221110 135666799999999 6665543
No 220
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.91 E-value=3.9e-09 Score=113.30 Aligned_cols=107 Identities=7% Similarity=0.038 Sum_probs=78.3
Q ss_pred CCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC--CC
Q 004178 532 ATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD--SR 609 (770)
Q Consensus 532 ~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp--~~ 609 (770)
+.+|||||||+|.++..+++.. +..+|++||+++.+++.|++++. ....++++++.+|+.++. ..
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~------------~~~~~rv~v~~~Da~~~l~~~~ 156 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFD------------IPRAPRVKIRVDDARMVAESFT 156 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSC------------CCCTTTEEEEESCHHHHHHTCC
T ss_pred CCEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhcc------------ccCCCceEEEECcHHHHHhhcc
Confidence 3499999999999999999843 23699999999999999998762 113468999999987652 23
Q ss_pred CCCccEEEeccccccCChhH--HHHHHHHHHHcccCC-EEEEEec
Q 004178 610 LHGFDIGTCLEVIEHMEEDE--ASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 610 d~sFDlVVc~eVLEHL~~d~--~~~fleeI~rvLKPG-~LIISTP 651 (770)
.+.||+|++....+.-.... ...|.+.+.++|+|| ++++.+.
T Consensus 157 ~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 157 PASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 57899999854322211111 145667899999998 5555443
No 221
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.91 E-value=4.8e-09 Score=116.68 Aligned_cols=120 Identities=14% Similarity=0.075 Sum_probs=90.8
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
.+...+...++.+|||+|||+|..+..+++..+...+|+|+|+++.+++.+++++.. .+..++++.++
T Consensus 250 l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~------------~g~~~v~~~~~ 317 (450)
T 2yxl_A 250 VASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKR------------MGIKIVKPLVK 317 (450)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH------------TTCCSEEEECS
T ss_pred HHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHH------------cCCCcEEEEEc
Confidence 344555667788999999999999999988653337999999999999999988753 24457999999
Q ss_pred CccccC--CCCCCccEEEe------ccccccCChhH--------------HHHHHHHHHHcccCC-EEEEEecCC
Q 004178 602 SITVFD--SRLHGFDIGTC------LEVIEHMEEDE--------------ASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 602 Daedlp--~~d~sFDlVVc------~eVLEHL~~d~--------------~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
|+.+++ +.++.||+|++ .+++++.++-. ...+++.+.++|||| .++++|...
T Consensus 318 D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 318 DARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp CTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred ChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 998876 33467999996 45666554211 145677899999998 777776653
No 222
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.90 E-value=4.9e-09 Score=109.79 Aligned_cols=85 Identities=14% Similarity=0.228 Sum_probs=69.4
Q ss_pred HHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEE
Q 004178 520 VEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLF 599 (770)
Q Consensus 520 ~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~ 599 (770)
.+.+++.+...++.+|||||||+|.++..|++.+ .+|+|+|+++.|++.+++++... ....++++.
T Consensus 17 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~-----------~~~~~v~~~ 82 (285)
T 1zq9_A 17 INSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGT-----------PVASKLQVL 82 (285)
T ss_dssp HHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTS-----------TTGGGEEEE
T ss_pred HHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhc-----------CCCCceEEE
Confidence 3456666777778999999999999999999886 79999999999999999876311 112579999
Q ss_pred ECCccccCCCCCCccEEEecc
Q 004178 600 DGSITVFDSRLHGFDIGTCLE 620 (770)
Q Consensus 600 ~GDaedlp~~d~sFDlVVc~e 620 (770)
++|+.+.+.+ .||+|++..
T Consensus 83 ~~D~~~~~~~--~fD~vv~nl 101 (285)
T 1zq9_A 83 VGDVLKTDLP--FFDTCVANL 101 (285)
T ss_dssp ESCTTTSCCC--CCSEEEEEC
T ss_pred Ecceecccch--hhcEEEEec
Confidence 9999887654 799999963
No 223
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.90 E-value=5.7e-09 Score=111.48 Aligned_cols=113 Identities=12% Similarity=0.237 Sum_probs=81.2
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc-CC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF-DS 608 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl-p~ 608 (770)
..+.+|||||||+|.++..+++.. +..+|+++|+++.+++.|++++...... -..+++++.++|+.+. +.
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~--------~~~~~v~~~~~D~~~~l~~ 185 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCG--------YEDKRVNVFIEDASKFLEN 185 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGG--------GGSTTEEEEESCHHHHHHH
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccc--------cCCCcEEEEEccHHHHHhh
Confidence 457899999999999999999874 3589999999999999999876421000 0135799999998763 22
Q ss_pred CCCCccEEEeccccccCCh-hHH--HHHHHHHHHcccCC-EEEEEecC
Q 004178 609 RLHGFDIGTCLEVIEHMEE-DEA--SQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 609 ~d~sFDlVVc~eVLEHL~~-d~~--~~fleeI~rvLKPG-~LIISTPN 652 (770)
..+.||+|++... +++.+ ... ..+.+.+.++|||| .+++...+
T Consensus 186 ~~~~fDvIi~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 186 VTNTYDVIIVDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp CCSCEEEEEEECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCCCceEEEECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 3578999998542 22221 111 46667899999999 66655433
No 224
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.89 E-value=9.2e-09 Score=113.82 Aligned_cols=90 Identities=16% Similarity=0.227 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCc
Q 004178 515 LSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVK 594 (770)
Q Consensus 515 L~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~ 594 (770)
..+..++.+++.+...++.+|||+|||+|.++..|++.. .+|+|+|+|+.+++.|++++.. .+..
T Consensus 270 ~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~---~~V~gvD~s~~al~~A~~n~~~------------~~~~ 334 (433)
T 1uwv_A 270 VNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQA---ASVVGVEGVPALVEKGQQNARL------------NGLQ 334 (433)
T ss_dssp HHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTS---SEEEEEESCHHHHHHHHHHHHH------------TTCC
T ss_pred HHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhC---CEEEEEeCCHHHHHHHHHHHHH------------cCCC
Confidence 455566677777776678899999999999999999885 8999999999999999987742 2345
Q ss_pred cEEEEECCcccc----CCCCCCccEEEec
Q 004178 595 SAVLFDGSITVF----DSRLHGFDIGTCL 619 (770)
Q Consensus 595 ~Vef~~GDaedl----p~~d~sFDlVVc~ 619 (770)
+++|.++|+.+. +..++.||+|++.
T Consensus 335 ~v~f~~~d~~~~l~~~~~~~~~fD~Vv~d 363 (433)
T 1uwv_A 335 NVTFYHENLEEDVTKQPWAKNGFDKVLLD 363 (433)
T ss_dssp SEEEEECCTTSCCSSSGGGTTCCSEEEEC
T ss_pred ceEEEECCHHHHhhhhhhhcCCCCEEEEC
Confidence 899999999873 2345689999874
No 225
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.89 E-value=7.5e-09 Score=109.04 Aligned_cols=113 Identities=13% Similarity=0.171 Sum_probs=79.5
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc-CC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF-DS 608 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl-p~ 608 (770)
..+.+|||+|||+|.++..+++.. +..+|+++|+++.+++.|++++...... ...+++++..+|+.+. +.
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~--------~~~~~v~~~~~D~~~~l~~ 159 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCG--------FDDPRAEIVIANGAEYVRK 159 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGG--------GGCTTEEEEESCHHHHGGG
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccc--------cCCCceEEEECcHHHHHhh
Confidence 356899999999999999999874 3479999999999999999876431111 0135899999998763 33
Q ss_pred CCCCccEEEecccccc-CChh---HHHHHHHHHHHcccCC-EEEEEecC
Q 004178 609 RLHGFDIGTCLEVIEH-MEED---EASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 609 ~d~sFDlVVc~eVLEH-L~~d---~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
..+.||+|++... .+ +... ....+.+.+.++|||| .+++.+.+
T Consensus 160 ~~~~fD~Ii~d~~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 160 FKNEFDVIIIDST-DPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp CSSCEEEEEEEC-----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred CCCCceEEEEcCC-CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 4578999998432 22 2110 1145667899999998 66665433
No 226
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.88 E-value=9.9e-10 Score=121.40 Aligned_cols=125 Identities=14% Similarity=0.094 Sum_probs=84.7
Q ss_pred hhhhhhcCC-chHHHHHHHHHHHHhhcCCCCEEEEEcCc------cchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHH
Q 004178 504 DRMEQALFS-PPLSKQRVEYALQHIKESCATTLVDFGCG------SGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKII 576 (770)
Q Consensus 504 eR~e~~~F~-PPL~~qR~e~Il~~L~~~~~~rVLDIGCG------tG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL 576 (770)
.+|....+. ...+...++.+++.+.. ++.+||||||| +|..+..+++...+..+|+|+|+|+.|. .
T Consensus 189 ~~Y~tDK~~~~h~y~~~Ye~lL~~l~~-~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~ 261 (419)
T 3sso_A 189 SRYFTPKFGFLHWFTPHYDRHFRDYRN-QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V 261 (419)
T ss_dssp HHTTCTTBSSSCBCHHHHHHHHGGGTT-SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G
T ss_pred HHhCCCcccccchHHHHHHHHHHhhcC-CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h
Confidence 344433333 33344445555554443 57899999999 6666655654321458999999999872 1
Q ss_pred hhhhhcccccCCCCCCCccEEEEECCccccCCC------CCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEE
Q 004178 577 HSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR------LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVS 649 (770)
Q Consensus 577 ~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~------d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIS 649 (770)
..++++|+++|+.++++. +++||+|+|... +|+. +. ..++++++++|||| .+++.
T Consensus 262 ---------------~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~~-d~-~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 262 ---------------DELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDGS-HINA-HV-RTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp ---------------CBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECSC-CCHH-HH-HHHHHHHGGGEEEEEEEEEE
T ss_pred ---------------cCCCcEEEEecccccchhhhhhcccCCccEEEECCc-ccch-hH-HHHHHHHHHhcCCCeEEEEE
Confidence 124799999999998765 689999999754 4543 44 45556799999999 77776
Q ss_pred ecCC
Q 004178 650 TPNY 653 (770)
Q Consensus 650 TPN~ 653 (770)
....
T Consensus 324 Dl~t 327 (419)
T 3sso_A 324 DMWT 327 (419)
T ss_dssp CGGG
T ss_pred eccc
Confidence 6553
No 227
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.88 E-value=5.2e-09 Score=111.69 Aligned_cols=111 Identities=17% Similarity=0.231 Sum_probs=77.9
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc-CC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF-DS 608 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl-p~ 608 (770)
..+.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++...... -..+++++..+|+.+. +.
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~--------~~~~rv~~~~~D~~~~l~~ 177 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCG--------FSHPKLDLFCGDGFEFLKN 177 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGG--------GGCTTEEEECSCHHHHHHH
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccc--------cCCCCEEEEEChHHHHHHh
Confidence 457899999999999999999875 4589999999999999999876321000 0135799999998763 33
Q ss_pred CCCCccEEEeccccccCChhH-H--HHHHHHHHHcccCC-EEEEEe
Q 004178 609 RLHGFDIGTCLEVIEHMEEDE-A--SQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 609 ~d~sFDlVVc~eVLEHL~~d~-~--~~fleeI~rvLKPG-~LIIST 650 (770)
..+.||+|++... +++.+.. . ..+.+.+.++|+|| .+++.+
T Consensus 178 ~~~~fD~Ii~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 178 HKNEFDVIITDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CTTCEEEEEECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCCCceEEEEcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 4578999998543 3433221 1 46677899999999 555544
No 228
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.87 E-value=5e-09 Score=109.38 Aligned_cols=115 Identities=17% Similarity=0.215 Sum_probs=78.3
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc-CC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF-DS 608 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl-p~ 608 (770)
..+.+|||||||+|.++..+++.+ ..+|+++|+++.+++.|++++ ....... ...+....+++++..+|+.+. ..
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~--~~~v~~vDid~~~i~~ar~~~-~~~~~l~-~~~~~~~~~~v~~~~~D~~~~l~~ 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHD--VDEVIMVEIDEDVIMVSKDLI-KIDNGLL-EAMLNGKHEKAKLTIGDGFEFIKN 149 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSC--CSEEEEEESCHHHHHHHHHHT-CTTTTHH-HHHHTTCCSSEEEEESCHHHHHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCC--CCEEEEEECCHHHHHHHHHHH-hhccccc-cccccCCCCcEEEEECchHHHhcc
Confidence 457899999999999999999873 479999999999999999876 2100000 000000235799999998653 22
Q ss_pred CCCCccEEEeccccccCCh-hH--HHHHHHHHHHcccCC-EEEEEe
Q 004178 609 RLHGFDIGTCLEVIEHMEE-DE--ASQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 609 ~d~sFDlVVc~eVLEHL~~-d~--~~~fleeI~rvLKPG-~LIIST 650 (770)
.+.||+|++.... +... .. ...+.+.+.++|+|| .+++.+
T Consensus 150 -~~~fD~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 150 -NRGFDVIIADSTD-PVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp -CCCEEEEEEECCC-CC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred -cCCeeEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 5789999986543 2221 11 145667899999998 555543
No 229
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.87 E-value=1.3e-08 Score=110.85 Aligned_cols=108 Identities=15% Similarity=0.066 Sum_probs=80.6
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCc-cEEEEECCccccCC-
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVK-SAVLFDGSITVFDS- 608 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~-~Vef~~GDaedlp~- 608 (770)
++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.|++++.. .+.. ++++.++|+.+...
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g--~~~v~~vD~s~~~l~~a~~n~~~------------n~~~~~v~~~~~d~~~~~~~ 282 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAG--ADEVIGIDKSPRAIETAKENAKL------------NGVEDRMKFIVGSAFEEMEK 282 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHH------------TTCGGGEEEEESCHHHHHHH
T ss_pred CCCeEEEecCCCCHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHH------------cCCCccceEEECCHHHHHHH
Confidence 57899999999999999999874 26999999999999999998752 2333 79999999877533
Q ss_pred ---CCCCccEEEeccccccCCh-------hHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 609 ---RLHGFDIGTCLEVIEHMEE-------DEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 609 ---~d~sFDlVVc~eVLEHL~~-------d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
....||+|++.--...... .....+...+.++|+|| .+++++.+
T Consensus 283 ~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 283 LQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp HHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred HHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 2568999998422111110 23345666799999999 67776655
No 230
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.87 E-value=1.2e-08 Score=110.98 Aligned_cols=107 Identities=13% Similarity=0.036 Sum_probs=79.8
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC--
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS-- 608 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~-- 608 (770)
++.+|||+|||+|.++..+++.. .+|+|+|+++.+++.|++++.. .+..+++++++|+.+...
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~n~~~------------n~~~~~~~~~~d~~~~~~~~ 273 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGF---REVVAVDSSAEALRRAEENARL------------NGLGNVRVLEANAFDLLRRL 273 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHE---EEEEEEESCHHHHHHHHHHHHH------------TTCTTEEEEESCHHHHHHHH
T ss_pred CCCeEEEeeeccCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHH------------cCCCCceEEECCHHHHHHHH
Confidence 57899999999999999999874 8999999999999999998752 234469999999877533
Q ss_pred --CCCCccEEEeccccccCC-------hhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 609 --RLHGFDIGTCLEVIEHME-------EDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 609 --~d~sFDlVVc~eVLEHL~-------~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
....||+|++.--..... ......+...+.++|+|| .+++++..
T Consensus 274 ~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 274 EKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp HHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 146899999842110100 023345666799999999 66666544
No 231
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.87 E-value=5e-09 Score=118.00 Aligned_cols=118 Identities=14% Similarity=0.140 Sum_probs=88.4
Q ss_pred HHHHhhcC--CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 523 ALQHIKES--CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 523 Il~~L~~~--~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
+...+... ++.+|||+|||+|..+..|++..+...+|+|+|+++.+++.+++++... +..++++.+
T Consensus 107 ~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~------------g~~nv~~~~ 174 (479)
T 2frx_A 107 PVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRC------------GISNVALTH 174 (479)
T ss_dssp HHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHH------------TCCSEEEEC
T ss_pred HHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc------------CCCcEEEEe
Confidence 33445555 7889999999999999999986533479999999999999999987532 345799999
Q ss_pred CCccccCC-CCCCccEEEe------ccccccCCh-------h-------HHHHHHHHHHHcccCC-EEEEEecC
Q 004178 601 GSITVFDS-RLHGFDIGTC------LEVIEHMEE-------D-------EASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 601 GDaedlp~-~d~sFDlVVc------~eVLEHL~~-------d-------~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
+|+.+++. ..+.||+|++ .+++.+.++ + ....+++++.++|||| .++++|..
T Consensus 175 ~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 175 FDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp CCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 99988764 4578999997 234443321 1 1235667799999998 77777664
No 232
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.86 E-value=8.5e-09 Score=108.81 Aligned_cols=86 Identities=20% Similarity=0.326 Sum_probs=66.5
Q ss_pred HHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEE
Q 004178 520 VEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLF 599 (770)
Q Consensus 520 ~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~ 599 (770)
.+.+++.+...++.+|||+|||+|.++..|++.+ .+|+|+|+++.+++.|++++.. .+..++++.
T Consensus 31 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~---~~v~~vDi~~~~~~~a~~~~~~------------~~~~~v~~~ 95 (299)
T 2h1r_A 31 LDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLA---KKVITIDIDSRMISEVKKRCLY------------EGYNNLEVY 95 (299)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTS---SEEEEECSCHHHHHHHHHHHHH------------TTCCCEEC-
T ss_pred HHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHH------------cCCCceEEE
Confidence 4456666666778899999999999999999886 7999999999999999987642 123579999
Q ss_pred ECCccccCCCCCCccEEEecccc
Q 004178 600 DGSITVFDSRLHGFDIGTCLEVI 622 (770)
Q Consensus 600 ~GDaedlp~~d~sFDlVVc~eVL 622 (770)
++|+.+++. ..||+|++.-..
T Consensus 96 ~~D~~~~~~--~~~D~Vv~n~py 116 (299)
T 2h1r_A 96 EGDAIKTVF--PKFDVCTANIPY 116 (299)
T ss_dssp ---CCSSCC--CCCSEEEEECCG
T ss_pred ECchhhCCc--ccCCEEEEcCCc
Confidence 999988765 489999986444
No 233
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.81 E-value=2.3e-08 Score=96.31 Aligned_cols=101 Identities=13% Similarity=0.080 Sum_probs=71.7
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCC--------ceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEE-E
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTAL--------EKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLF-D 600 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~--------~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~-~ 600 (770)
.++.+|||+|||+|.++..+++..+.. .+|+|+|+++.+ ...++++. +
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------------------~~~~~~~~~~ 77 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------------------PLEGATFLCP 77 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------------------CCTTCEEECS
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------------------cCCCCeEEEe
Confidence 457899999999999999999875332 689999999821 11367888 8
Q ss_pred CCccccC--------CCCCCccEEEeccccccCC---hhHH------HHHHHHHHHcccCC-EEEEEecCC
Q 004178 601 GSITVFD--------SRLHGFDIGTCLEVIEHME---EDEA------SQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 601 GDaedlp--------~~d~sFDlVVc~eVLEHL~---~d~~------~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
+|+...+ ..+.+||+|+|...+++.. .+.. ..+++++.++|||| .+++.+...
T Consensus 78 ~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 78 ADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp CCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred ccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 8877643 2245899999966544321 1221 35666799999998 777765543
No 234
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.79 E-value=6.1e-09 Score=109.25 Aligned_cols=116 Identities=16% Similarity=0.094 Sum_probs=76.7
Q ss_pred HHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEE
Q 004178 519 RVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVL 598 (770)
Q Consensus 519 R~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef 598 (770)
.+.++.+.....++.+|||+|||+|.++..+++. .+|+|+|+++ |+..++++. . .......++++
T Consensus 70 KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~--~--------~~~~~~~~v~~ 134 (276)
T 2wa2_A 70 KLAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKP--R--------LVETFGWNLIT 134 (276)
T ss_dssp HHHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCC--C--------CCCCTTGGGEE
T ss_pred HHHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhch--h--------hhhhcCCCeEE
Confidence 3444444433346789999999999999999987 4899999999 643332110 0 00011127899
Q ss_pred E--ECCccccCCCCCCccEEEeccccccCCh---hHH--HHHHHHHHHcccCCE---EEEEecC
Q 004178 599 F--DGSITVFDSRLHGFDIGTCLEVIEHMEE---DEA--SQFGNIVLSSFRPRI---LIVSTPN 652 (770)
Q Consensus 599 ~--~GDaedlp~~d~sFDlVVc~eVLEHL~~---d~~--~~fleeI~rvLKPG~---LIISTPN 652 (770)
. ++|+.+++ ++.||+|+|..+ ++... +.. ..+++.+.++||||. +++.+..
T Consensus 135 ~~~~~D~~~l~--~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 135 FKSKVDVTKME--PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp EECSCCGGGCC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred EeccCcHhhCC--CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 9 99999876 578999999877 44331 111 124567899999964 6665544
No 235
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.79 E-value=3.9e-08 Score=106.50 Aligned_cols=106 Identities=11% Similarity=0.035 Sum_probs=82.2
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccc-cCC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITV-FDS 608 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaed-lp~ 608 (770)
.++.+|||+| |+|.++..+++.+ +..+|+|+|+++.|++.|++++... +..+++++++|+.+ ++.
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~-~~~~v~~vDi~~~~l~~a~~~~~~~------------g~~~v~~~~~D~~~~l~~ 236 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSG-LPKRIAVLDIDERLTKFIEKAANEI------------GYEDIEIFTFDLRKPLPD 236 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHT-CCSEEEEECSCHHHHHHHHHHHHHH------------TCCCEEEECCCTTSCCCT
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHc------------CCCCEEEEEChhhhhchh
Confidence 3578999999 9999999998875 3469999999999999999987532 22379999999988 654
Q ss_pred -CCCCccEEEeccccccCChhHHHHHHHHHHHcccCC--EEEEEecC
Q 004178 609 -RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR--ILIVSTPN 652 (770)
Q Consensus 609 -~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG--~LIISTPN 652 (770)
..+.||+|++.-.+++.. ...+++.+.++|||| .+++++..
T Consensus 237 ~~~~~fD~Vi~~~p~~~~~---~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 237 YALHKFDTFITDPPETLEA---IRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp TTSSCBSEEEECCCSSHHH---HHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred hccCCccEEEECCCCchHH---HHHHHHHHHHHcccCCeEEEEEEec
Confidence 346899999986654332 356777899999996 44665544
No 236
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.78 E-value=7.2e-09 Score=116.41 Aligned_cols=118 Identities=8% Similarity=0.006 Sum_probs=88.1
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
.+...+...++.+|||+|||+|..+..|++..+...+|+|+|+++.+++.+++++.. .+.. +.+.++
T Consensus 92 l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r------------~G~~-v~~~~~ 158 (464)
T 3m6w_A 92 AVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVER------------WGAP-LAVTQA 158 (464)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH------------HCCC-CEEECS
T ss_pred HHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH------------cCCe-EEEEEC
Confidence 344555667789999999999999999997653347999999999999999998753 2344 899999
Q ss_pred CccccCC-CCCCccEEEe------ccccccCCh-------h-------HHHHHHHHHHHcccCC-EEEEEecC
Q 004178 602 SITVFDS-RLHGFDIGTC------LEVIEHMEE-------D-------EASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 602 Daedlp~-~d~sFDlVVc------~eVLEHL~~-------d-------~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
|+.+++. ..+.||+|++ .+++.+-++ + ....+++.+.++|||| .++.+|..
T Consensus 159 Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 159 PPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp CHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred CHHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 9887652 3578999995 234443331 1 1256677899999998 77776654
No 237
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.77 E-value=7.6e-09 Score=107.85 Aligned_cols=118 Identities=12% Similarity=0.076 Sum_probs=77.5
Q ss_pred HHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccE
Q 004178 517 KQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSA 596 (770)
Q Consensus 517 ~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~V 596 (770)
...+..+.+.....++.+|||+|||+|.++..+++. .+|+|||+++ |+..+++.. .. ......++
T Consensus 60 a~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~--~~--------~~~~~~~v 124 (265)
T 2oxt_A 60 TAKLAWMEERGYVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVP--RI--------TESYGWNI 124 (265)
T ss_dssp HHHHHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCC--CC--------CCBTTGGG
T ss_pred HHHHHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhh--hh--------hhccCCCe
Confidence 344455555433446789999999999999999887 4899999998 543322100 00 00011278
Q ss_pred EEE--ECCccccCCCCCCccEEEeccccccCChh---HHH--HHHHHHHHcccCC---EEEEEecC
Q 004178 597 VLF--DGSITVFDSRLHGFDIGTCLEVIEHMEED---EAS--QFGNIVLSSFRPR---ILIVSTPN 652 (770)
Q Consensus 597 ef~--~GDaedlp~~d~sFDlVVc~eVLEHL~~d---~~~--~fleeI~rvLKPG---~LIISTPN 652 (770)
.++ ++|+.+++ +..||+|+|..+ ++.... ... .+++.+.++|||| .+++.+..
T Consensus 125 ~~~~~~~D~~~l~--~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 125 VKFKSRVDIHTLP--VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp EEEECSCCTTTSC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EEEecccCHhHCC--CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 999 99999876 578999999877 444311 111 2456788999997 45555544
No 238
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.77 E-value=1.4e-08 Score=107.89 Aligned_cols=86 Identities=16% Similarity=0.162 Sum_probs=72.7
Q ss_pred HHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEE
Q 004178 520 VEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLF 599 (770)
Q Consensus 520 ~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~ 599 (770)
.+.+++.+...++.+|||||||+|.++..|++.+ .+|+|+|+++.+++.+++++. ...+++++
T Consensus 39 ~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~---~~V~aVEid~~li~~a~~~~~--------------~~~~v~vi 101 (295)
T 3gru_A 39 VNKAVESANLTKDDVVLEIGLGKGILTEELAKNA---KKVYVIEIDKSLEPYANKLKE--------------LYNNIEII 101 (295)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCGGGHHHHHHHHH--------------HCSSEEEE
T ss_pred HHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHhc--------------cCCCeEEE
Confidence 4456677777788999999999999999999886 799999999999999998763 12479999
Q ss_pred ECCccccCCCCCCccEEEecccc
Q 004178 600 DGSITVFDSRLHGFDIGTCLEVI 622 (770)
Q Consensus 600 ~GDaedlp~~d~sFDlVVc~eVL 622 (770)
++|+.+++++...||+|+++...
T Consensus 102 ~gD~l~~~~~~~~fD~Iv~NlPy 124 (295)
T 3gru_A 102 WGDALKVDLNKLDFNKVVANLPY 124 (295)
T ss_dssp ESCTTTSCGGGSCCSEEEEECCG
T ss_pred ECchhhCCcccCCccEEEEeCcc
Confidence 99999988777789999977444
No 239
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.75 E-value=2.4e-08 Score=109.72 Aligned_cols=137 Identities=14% Similarity=0.097 Sum_probs=96.6
Q ss_pred CCchHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCC-----------------------------------
Q 004178 511 FSPPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTA----------------------------------- 555 (770)
Q Consensus 511 F~PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp----------------------------------- 555 (770)
-..|+.+.....++......++..|||.+||+|.++...+.....
T Consensus 181 ~~Apl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~ 260 (393)
T 3k0b_A 181 GSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANY 260 (393)
T ss_dssp CSCSCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCT
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcc
Confidence 344777777777777777777889999999999999877754311
Q ss_pred --CceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCCCCCccEEEecccc-ccCC-hhHHH
Q 004178 556 --LEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSRLHGFDIGTCLEVI-EHME-EDEAS 631 (770)
Q Consensus 556 --~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~d~sFDlVVc~eVL-EHL~-~d~~~ 631 (770)
..+|+|+|+++.|++.|++++... +...++++.++|+.+++.. ..||+|++.--. +.+. .+...
T Consensus 261 ~~~~~V~GvDid~~al~~Ar~Na~~~-----------gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~ 328 (393)
T 3k0b_A 261 DQPLNIIGGDIDARLIEIAKQNAVEA-----------GLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVR 328 (393)
T ss_dssp TCCCCEEEEESCHHHHHHHHHHHHHT-----------TCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHH
T ss_pred cCCceEEEEECCHHHHHHHHHHHHHc-----------CCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHH
Confidence 146999999999999999987531 1223599999999998765 589999998322 1222 12334
Q ss_pred HHHHHHHHcccC--C-EEEEEecCCchhHHH
Q 004178 632 QFGNIVLSSFRP--R-ILIVSTPNYEYNAIL 659 (770)
Q Consensus 632 ~fleeI~rvLKP--G-~LIISTPN~efN~lf 659 (770)
.+.+.+.+.||+ | .+++.|++.++...+
T Consensus 329 ~ly~~lg~~lk~~~g~~~~iit~~~~l~~~~ 359 (393)
T 3k0b_A 329 QLYREMGIVYKRMPTWSVYVLTSYELFEEVY 359 (393)
T ss_dssp HHHHHHHHHHHTCTTCEEEEEECCTTHHHHH
T ss_pred HHHHHHHHHHhcCCCCEEEEEECCHHHHHHh
Confidence 444556666665 6 777888887765443
No 240
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.75 E-value=1.6e-08 Score=111.52 Aligned_cols=117 Identities=16% Similarity=0.205 Sum_probs=88.6
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
.+...+...++.+|||+|||+|..+..+++.. +..+|+|+|+++.+++.+++++.. .+. ++++.++
T Consensus 237 ~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~-~~~~v~a~D~~~~~l~~~~~~~~~------------~g~-~~~~~~~ 302 (429)
T 1sqg_A 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKR------------LGM-KATVKQG 302 (429)
T ss_dssp THHHHHCCCTTCEEEEESCTTCHHHHHHHHHC-TTCEEEEEESSTTTHHHHHHHHHH------------TTC-CCEEEEC
T ss_pred HHHHHcCCCCcCeEEEECCCchHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHH------------cCC-CeEEEeC
Confidence 34455566778899999999999999999876 237999999999999999988753 122 4789999
Q ss_pred CccccC--CCCCCccEEEe------ccccccCChhH--------------HHHHHHHHHHcccCC-EEEEEecC
Q 004178 602 SITVFD--SRLHGFDIGTC------LEVIEHMEEDE--------------ASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 602 Daedlp--~~d~sFDlVVc------~eVLEHL~~d~--------------~~~fleeI~rvLKPG-~LIISTPN 652 (770)
|+.+++ +..+.||+|++ .+++++.++-. ...+++.+.++|||| .++++|..
T Consensus 303 D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 303 DGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp CTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred chhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 998765 34568999995 35666655211 136677899999998 77777754
No 241
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.75 E-value=5e-08 Score=102.85 Aligned_cols=118 Identities=19% Similarity=0.167 Sum_probs=87.4
Q ss_pred hhcCCchHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccC
Q 004178 508 QALFSPPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAA 587 (770)
Q Consensus 508 ~~~F~PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l 587 (770)
...|++.+...|... .+.+. ++.+|||+|||+|.++..+++.+. .+|+++|+++.+++.+++++...
T Consensus 105 k~~f~~~~~~er~ri-~~~~~--~g~~VlD~~aG~G~~~i~~a~~g~--~~V~avD~np~a~~~~~~N~~~N-------- 171 (278)
T 3k6r_A 105 KIMFSPANVKERVRM-AKVAK--PDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLN-------- 171 (278)
T ss_dssp TSCCCGGGHHHHHHH-HHHCC--TTCEEEETTCTTTTTTHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHT--------
T ss_pred ceEEcCCcHHHHHHH-HHhcC--CCCEEEEecCcCcHHHHHHHHhcC--CeEEEEECCHHHHHHHHHHHHHc--------
Confidence 356777888877653 34433 488999999999999999998763 68999999999999999987531
Q ss_pred CCCCCCccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEE
Q 004178 588 VPCTDVKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIV 648 (770)
Q Consensus 588 ~pr~~~~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LII 648 (770)
+...+++++++|+.++.. .+.||.|++.... ....|+..+.++|||| .+.+
T Consensus 172 ---~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~p~------~~~~~l~~a~~~lk~gG~ih~ 223 (278)
T 3k6r_A 172 ---KVEDRMSAYNMDNRDFPG-ENIADRILMGYVV------RTHEFIPKALSIAKDGAIIHY 223 (278)
T ss_dssp ---TCTTTEEEECSCTTTCCC-CSCEEEEEECCCS------SGGGGHHHHHHHEEEEEEEEE
T ss_pred ---CCCCcEEEEeCcHHHhcc-ccCCCEEEECCCC------cHHHHHHHHHHHcCCCCEEEE
Confidence 223469999999988765 4789999865321 1123445678899998 5444
No 242
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.74 E-value=4.5e-08 Score=107.36 Aligned_cols=135 Identities=13% Similarity=0.093 Sum_probs=97.5
Q ss_pred chHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCC-------------------------------------
Q 004178 513 PPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTA------------------------------------- 555 (770)
Q Consensus 513 PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp------------------------------------- 555 (770)
.|+.+.....++......++..|||.+||+|.++...+.....
T Consensus 176 Apl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~ 255 (384)
T 3ldg_A 176 APIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDI 255 (384)
T ss_dssp CCCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTC
T ss_pred CCCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccC
Confidence 3666666667777777777889999999999999877754311
Q ss_pred CceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCCCCCccEEEecc--ccccCChhHHHHH
Q 004178 556 LEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSRLHGFDIGTCLE--VIEHMEEDEASQF 633 (770)
Q Consensus 556 ~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~d~sFDlVVc~e--VLEHL~~d~~~~f 633 (770)
..+|+|+|+++.|++.|++++... +....+++.++|+.+++.. ..||+|++.= -...-..+....+
T Consensus 256 ~~~v~GvDid~~al~~Ar~Na~~~-----------gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~l 323 (384)
T 3ldg_A 256 QLDISGFDFDGRMVEIARKNAREV-----------GLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDIL 323 (384)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHT-----------TCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHH
T ss_pred CceEEEEECCHHHHHHHHHHHHHc-----------CCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHH
Confidence 146999999999999999987531 1223699999999998765 5899999973 2222222445556
Q ss_pred HHHHHHcccC--C-EEEEEecCCchhHHH
Q 004178 634 GNIVLSSFRP--R-ILIVSTPNYEYNAIL 659 (770)
Q Consensus 634 leeI~rvLKP--G-~LIISTPN~efN~lf 659 (770)
.+.+.+.||+ | .+++.|++.++...+
T Consensus 324 y~~lg~~lk~~~g~~~~iit~~~~l~~~~ 352 (384)
T 3ldg_A 324 YNEMGETFAPLKTWSQFILTNDTDFEQKF 352 (384)
T ss_dssp HHHHHHHHTTCTTSEEEEEESCTTHHHHH
T ss_pred HHHHHHHHhhCCCcEEEEEECCHHHHHHh
Confidence 6567777776 6 888888887765544
No 243
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.74 E-value=5.6e-08 Score=106.88 Aligned_cols=106 Identities=9% Similarity=-0.069 Sum_probs=74.5
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC-CC
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD-SR 609 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp-~~ 609 (770)
++.+|||+|||+|.++..+++.+ ..|+|+|+|+.+++.|++++... +. ...+.++|+.+.. ..
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~g---a~V~avDis~~al~~a~~n~~~n------------g~-~~~~~~~D~~~~l~~~ 277 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKG---AYALAVDKDLEALGVLDQAALRL------------GL-RVDIRHGEALPTLRGL 277 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHH------------TC-CCEEEESCHHHHHHTC
T ss_pred CCCeEEEcccchhHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHHHh------------CC-CCcEEEccHHHHHHHh
Confidence 47899999999999999999976 55999999999999999987532 11 1356689987643 21
Q ss_pred CCCccEEEeccccccCC-------hhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 610 LHGFDIGTCLEVIEHME-------EDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 610 d~sFDlVVc~eVLEHL~-------~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
.+.||+|++.--..+-. ......+.+.+.++|||| .+++.+.+
T Consensus 278 ~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 278 EGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp CCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 33499999853211100 012345666789999999 55555544
No 244
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.73 E-value=4e-08 Score=105.19 Aligned_cols=116 Identities=18% Similarity=0.171 Sum_probs=83.8
Q ss_pred cCCchHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCC
Q 004178 510 LFSPPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVP 589 (770)
Q Consensus 510 ~F~PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~p 589 (770)
.|.+.....|. .+.+.+ .++.+|||+|||+|.++.. ++.. .+|+|+|+++.+++.|++++...
T Consensus 177 ~~~~~~~~er~-~i~~~~--~~~~~VLDlg~G~G~~~l~-a~~~---~~V~~vD~s~~ai~~a~~n~~~n---------- 239 (336)
T 2yx1_A 177 YFSPRLGGERA-RIMKKV--SLNDVVVDMFAGVGPFSIA-CKNA---KKIYAIDINPHAIELLKKNIKLN---------- 239 (336)
T ss_dssp CCCGGGHHHHH-HHHHHC--CTTCEEEETTCTTSHHHHH-TTTS---SEEEEEESCHHHHHHHHHHHHHT----------
T ss_pred ccCCccHHHHH-HHHHhc--CCCCEEEEccCccCHHHHh-ccCC---CEEEEEECCHHHHHHHHHHHHHc----------
Confidence 44455555555 344443 3578999999999999999 8733 79999999999999999987531
Q ss_pred CCCCccEEEEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 590 CTDVKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 590 r~~~~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
+...+++++++|+.+.. ..||+|++.-. .+ ...+.+.+.++|+|| .+++.+..
T Consensus 240 -~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP-~~-----~~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 240 -KLEHKIIPILSDVREVD---VKGNRVIMNLP-KF-----AHKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp -TCTTTEEEEESCGGGCC---CCEEEEEECCT-TT-----GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred -CCCCcEEEEECChHHhc---CCCcEEEECCc-Hh-----HHHHHHHHHHHcCCCCEEEEEEee
Confidence 11247999999998876 78999998521 11 124556788999998 56665544
No 245
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.73 E-value=5.9e-08 Score=95.74 Aligned_cols=96 Identities=11% Similarity=0.154 Sum_probs=68.8
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
.++.+|||+|||+|.++..+++.. .+|+|+|+++.. ..+++++.++|+.+.+..
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~~---~~V~gvD~~~~~-----------------------~~~~v~~~~~D~~~~~~~ 77 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSLA---RKIISIDLQEME-----------------------EIAGVRFIRCDIFKETIF 77 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTTC---SEEEEEESSCCC-----------------------CCTTCEEEECCTTSSSHH
T ss_pred CCCCEEEEEeecCCHHHHHHHHcC---CcEEEEeccccc-----------------------cCCCeEEEEccccCHHHH
Confidence 467899999999999999999985 899999998731 124799999999875421
Q ss_pred -----------CCCccEEEeccccccCC---hh------HHHHHHHHHHHcccCC-EEEEEec
Q 004178 610 -----------LHGFDIGTCLEVIEHME---ED------EASQFGNIVLSSFRPR-ILIVSTP 651 (770)
Q Consensus 610 -----------d~sFDlVVc~eVLEHL~---~d------~~~~fleeI~rvLKPG-~LIISTP 651 (770)
.+.||+|+|........ .+ ....+++.+.++|||| .+++.+-
T Consensus 78 ~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 78 DDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp HHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 14899999965332111 01 1234556789999998 5555443
No 246
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.72 E-value=2.4e-08 Score=103.77 Aligned_cols=99 Identities=13% Similarity=0.072 Sum_probs=75.5
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
..+++|||||||+|.++..+++. + .+|+++|+++.+++.|++++...... -..+++++..+|+.+..
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~--------~~~~rv~~~~~D~~~~~-- 137 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEV--------KNNKNFTHAKQLLDLDI-- 137 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHH--------HTCTTEEEESSGGGSCC--
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccc--------cCCCeEEEEechHHHHH--
Confidence 35789999999999999999988 3 89999999999999998765321000 01357999999988765
Q ss_pred CCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEE
Q 004178 610 LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVS 649 (770)
Q Consensus 610 d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIS 649 (770)
+.||+|++.. . ++. .+.+.+.+.|+|| .+++.
T Consensus 138 -~~fD~Ii~d~-----~-dp~-~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 138 -KKYDLIFCLQ-----E-PDI-HRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp -CCEEEEEESS-----C-CCH-HHHHHHHTTEEEEEEEEEE
T ss_pred -hhCCEEEECC-----C-ChH-HHHHHHHHhcCCCcEEEEE
Confidence 7899999862 2 222 3666899999999 55554
No 247
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.71 E-value=8.8e-08 Score=106.24 Aligned_cols=107 Identities=17% Similarity=0.141 Sum_probs=78.0
Q ss_pred HHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEE
Q 004178 518 QRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAV 597 (770)
Q Consensus 518 qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Ve 597 (770)
..++++.+ ..++.+|||+|||+|.++..|++.+ .+|+|+|+++.+++.|++++.. .+.. ++
T Consensus 280 ~l~~~~~~---~~~~~~VLDlgcG~G~~sl~la~~~---~~V~gvD~s~~ai~~A~~n~~~------------ngl~-v~ 340 (425)
T 2jjq_A 280 NLVRKVSE---LVEGEKILDMYSGVGTFGIYLAKRG---FNVKGFDSNEFAIEMARRNVEI------------NNVD-AE 340 (425)
T ss_dssp HHHHHHHH---HCCSSEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH------------HTCC-EE
T ss_pred HHHHHhhc---cCCCCEEEEeeccchHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHH------------cCCc-EE
Confidence 33445544 3457899999999999999999976 7999999999999999987742 1334 99
Q ss_pred EEECCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEe
Q 004178 598 LFDGSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 598 f~~GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIST 650 (770)
|.++|+.++... .||+|++.---..+. ..+.+.+ +.|+|| .++++.
T Consensus 341 ~~~~d~~~~~~~--~fD~Vv~dPPr~g~~----~~~~~~l-~~l~p~givyvsc 387 (425)
T 2jjq_A 341 FEVASDREVSVK--GFDTVIVDPPRAGLH----PRLVKRL-NREKPGVIVYVSC 387 (425)
T ss_dssp EEECCTTTCCCT--TCSEEEECCCTTCSC----HHHHHHH-HHHCCSEEEEEES
T ss_pred EEECChHHcCcc--CCCEEEEcCCccchH----HHHHHHH-HhcCCCcEEEEEC
Confidence 999999887543 899999854322222 2344433 358999 666654
No 248
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.71 E-value=5.8e-08 Score=99.35 Aligned_cols=77 Identities=13% Similarity=0.266 Sum_probs=63.6
Q ss_pred HHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEE
Q 004178 520 VEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLF 599 (770)
Q Consensus 520 ~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~ 599 (770)
.+.+++.+...++.+|||+|||+|.++..|++.+ .+|+|+|+++.|++.+++++. ...++++.
T Consensus 19 ~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~--------------~~~~v~~~ 81 (244)
T 1qam_A 19 IDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLV--------------DHDNFQVL 81 (244)
T ss_dssp HHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTT--------------TCCSEEEE
T ss_pred HHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhc--------------cCCCeEEE
Confidence 4456666666678899999999999999999887 799999999999999988652 12579999
Q ss_pred ECCccccCCCC-CCc
Q 004178 600 DGSITVFDSRL-HGF 613 (770)
Q Consensus 600 ~GDaedlp~~d-~sF 613 (770)
++|+.++++.+ ..|
T Consensus 82 ~~D~~~~~~~~~~~~ 96 (244)
T 1qam_A 82 NKDILQFKFPKNQSY 96 (244)
T ss_dssp CCCGGGCCCCSSCCC
T ss_pred EChHHhCCcccCCCe
Confidence 99999987753 345
No 249
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.71 E-value=1.4e-08 Score=113.84 Aligned_cols=119 Identities=13% Similarity=0.036 Sum_probs=88.0
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
.+...+...++.+|||+|||+|..+..++...+...+|+|+|+++.+++.+++++... +..++.+.++
T Consensus 96 l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~------------g~~nv~v~~~ 163 (456)
T 3m4x_A 96 IVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERW------------GVSNAIVTNH 163 (456)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH------------TCSSEEEECC
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHc------------CCCceEEEeC
Confidence 3445566677899999999999999999876433479999999999999999988532 4457999999
Q ss_pred CccccCC-CCCCccEEEec------cccccCCh--------------hHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 602 SITVFDS-RLHGFDIGTCL------EVIEHMEE--------------DEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 602 Daedlp~-~d~sFDlVVc~------eVLEHL~~--------------d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
|+.+++. ..+.||+|++. +++.+-++ .....+++.+.++|||| .++.+|..
T Consensus 164 Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs 236 (456)
T 3m4x_A 164 APAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCT 236 (456)
T ss_dssp CHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred CHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEee
Confidence 9887652 35789999972 34433221 11225677899999998 77776664
No 250
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.69 E-value=5.7e-08 Score=100.84 Aligned_cols=78 Identities=22% Similarity=0.306 Sum_probs=65.3
Q ss_pred HHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEE
Q 004178 520 VEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLF 599 (770)
Q Consensus 520 ~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~ 599 (770)
.+.+++.+...++.+|||||||+|.++..|++.+ .+|+|+|+++.|++.+++++. ...+++++
T Consensus 18 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~--------------~~~~v~~i 80 (255)
T 3tqs_A 18 LQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYN--------------QQKNITIY 80 (255)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHT--------------TCTTEEEE
T ss_pred HHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHh--------------hCCCcEEE
Confidence 3456677777788999999999999999999987 799999999999999998763 13589999
Q ss_pred ECCccccCCCC----CCcc
Q 004178 600 DGSITVFDSRL----HGFD 614 (770)
Q Consensus 600 ~GDaedlp~~d----~sFD 614 (770)
++|+.++++.. ..||
T Consensus 81 ~~D~~~~~~~~~~~~~~~~ 99 (255)
T 3tqs_A 81 QNDALQFDFSSVKTDKPLR 99 (255)
T ss_dssp ESCTTTCCGGGSCCSSCEE
T ss_pred EcchHhCCHHHhccCCCeE
Confidence 99999887642 4677
No 251
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.68 E-value=2.3e-08 Score=108.37 Aligned_cols=111 Identities=15% Similarity=0.272 Sum_probs=80.6
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
+++++.+...++.+|||+|||+|.++..+++..++..+|+|+|+++.+++.| .++++.+
T Consensus 29 ~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------------------~~~~~~~ 87 (421)
T 2ih2_A 29 DFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------------------PWAEGIL 87 (421)
T ss_dssp HHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------------------TTEEEEE
T ss_pred HHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------------------CCCcEEe
Confidence 3555666555567999999999999999987532237999999999888655 2588999
Q ss_pred CCccccCCCCCCccEEEec---ccc-------ccCChhHH-----------------HHHHHHHHHcccCC-EEEEEecC
Q 004178 601 GSITVFDSRLHGFDIGTCL---EVI-------EHMEEDEA-----------------SQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 601 GDaedlp~~d~sFDlVVc~---eVL-------EHL~~d~~-----------------~~fleeI~rvLKPG-~LIISTPN 652 (770)
+|+.+... .+.||+|+++ ... .|+.++.. ..|++.+.++|+|| .+++.+|+
T Consensus 88 ~D~~~~~~-~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 88 ADFLLWEP-GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp SCGGGCCC-SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CChhhcCc-cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 99887654 3689999994 111 12332222 25677899999998 77777776
Q ss_pred C
Q 004178 653 Y 653 (770)
Q Consensus 653 ~ 653 (770)
.
T Consensus 167 ~ 167 (421)
T 2ih2_A 167 T 167 (421)
T ss_dssp G
T ss_pred H
Confidence 3
No 252
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.68 E-value=5.8e-08 Score=106.26 Aligned_cols=135 Identities=21% Similarity=0.179 Sum_probs=97.5
Q ss_pred chHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCC-------------------------------------C
Q 004178 513 PPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPT-------------------------------------A 555 (770)
Q Consensus 513 PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~gg-------------------------------------p 555 (770)
.|+.+.....++......++.+|||+|||+|.++..++..+. .
T Consensus 177 Apl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~ 256 (385)
T 3ldu_A 177 APIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNES 256 (385)
T ss_dssp CCCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSC
T ss_pred CCCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccC
Confidence 366676677777777777788999999999999988875431 1
Q ss_pred CceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCCCCCccEEEecccc-ccCC-hhHHHHH
Q 004178 556 LEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSRLHGFDIGTCLEVI-EHME-EDEASQF 633 (770)
Q Consensus 556 ~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~d~sFDlVVc~eVL-EHL~-~d~~~~f 633 (770)
..+|+|+|+++.+++.|++++... +...+++|.++|+.+++.. ..||+|++.--. +.+. .+....+
T Consensus 257 ~~~V~GvDid~~ai~~Ar~Na~~~-----------gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~l 324 (385)
T 3ldu_A 257 KFKIYGYDIDEESIDIARENAEIA-----------GVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQL 324 (385)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHH-----------TCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHH
T ss_pred CceEEEEECCHHHHHHHHHHHHHc-----------CCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHH
Confidence 147999999999999999987532 1223799999999988764 589999996443 2232 1334455
Q ss_pred HHHHHHcccC--C-EEEEEecCCchhHHH
Q 004178 634 GNIVLSSFRP--R-ILIVSTPNYEYNAIL 659 (770)
Q Consensus 634 leeI~rvLKP--G-~LIISTPN~efN~lf 659 (770)
.+.+.+.||+ | .+++.|++.++...+
T Consensus 325 y~~lg~~lk~~~g~~~~iit~~~~l~~~~ 353 (385)
T 3ldu_A 325 YKELGYAFRKLKNWSYYLITSYEDFEYEF 353 (385)
T ss_dssp HHHHHHHHHTSBSCEEEEEESCTTHHHHH
T ss_pred HHHHHHHHhhCCCCEEEEEECCHHHHHhh
Confidence 5566667766 6 777788887765544
No 253
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.68 E-value=2.8e-08 Score=116.74 Aligned_cols=106 Identities=11% Similarity=0.055 Sum_probs=80.9
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCC--ccEEEEECCccc-cC
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDV--KSAVLFDGSITV-FD 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~--~~Vef~~GDaed-lp 607 (770)
++++|||+|||+|.++..++..+ ..+|+++|+|+.+++.|++++.. ++. .+++++++|+.+ ++
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g--a~~V~aVD~s~~al~~a~~N~~~------------ngl~~~~v~~i~~D~~~~l~ 604 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG--ARSTTTVDMSRTYLEWAERNLRL------------NGLTGRAHRLIQADCLAWLR 604 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHH------------TTCCSTTEEEEESCHHHHHH
T ss_pred CCCcEEEeeechhHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHH------------cCCCccceEEEecCHHHHHH
Confidence 57899999999999999998865 25799999999999999998753 222 379999999877 33
Q ss_pred CCCCCccEEEecc-----------ccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 608 SRLHGFDIGTCLE-----------VIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 608 ~~d~sFDlVVc~e-----------VLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
...+.||+|++.- ++++. .....+...+.++|+|| .+++++..
T Consensus 605 ~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~--~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 605 EANEQFDLIFIDPPTFSNSKRMEDAFDVQ--RDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp HCCCCEEEEEECCCSBC-------CCBHH--HHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred hcCCCccEEEECCccccCCccchhHHHHH--HHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 3457899999843 22222 23445666799999999 66666655
No 254
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.65 E-value=7.2e-08 Score=104.39 Aligned_cols=112 Identities=16% Similarity=0.180 Sum_probs=78.5
Q ss_pred HHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccE
Q 004178 517 KQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSA 596 (770)
Q Consensus 517 ~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~V 596 (770)
.+.+.++.+.+... +.+|||+|||+|.++..|++.. .+|+|+|+++.+++.|++++.. .+..++
T Consensus 200 ~~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~~---~~V~gvd~~~~ai~~a~~n~~~------------ng~~~v 263 (369)
T 3bt7_A 200 IQMLEWALDVTKGS-KGDLLELYCGNGNFSLALARNF---DRVLATEIAKPSVAAAQYNIAA------------NHIDNV 263 (369)
T ss_dssp HHHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGGS---SEEEEECCCHHHHHHHHHHHHH------------TTCCSE
T ss_pred HHHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHH------------cCCCce
Confidence 45566777766543 5789999999999999999865 7999999999999999988742 244589
Q ss_pred EEEECCccccCC--CC--------------CCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 597 VLFDGSITVFDS--RL--------------HGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 597 ef~~GDaedlp~--~d--------------~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
+|+++|+.+... .. ..||+|++.-- . ..+.+.+.+.|+++ .++..+.|
T Consensus 264 ~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPP-------r-~g~~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 264 QIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPP-------R-SGLDSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp EEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCC-------T-TCCCHHHHHHHTTSSEEEEEESC
T ss_pred EEEECCHHHHHHHHhhccccccccccccccCCCCEEEECcC-------c-cccHHHHHHHHhCCCEEEEEECC
Confidence 999999876421 11 37999976321 1 11122355556665 55555544
No 255
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.63 E-value=3e-08 Score=105.30 Aligned_cols=103 Identities=15% Similarity=0.086 Sum_probs=71.5
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeC----ChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC-Ccc
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDI----SQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG-SIT 604 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDI----SeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G-Dae 604 (770)
.++.+|||+|||+|.++..+++. .+|+|+|+ ++.+++.+. .. ..+.+++++.++ |+.
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~--~~------------~~~~~~v~~~~~~D~~ 142 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIP--MS------------TYGWNLVRLQSGVDVF 142 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCC--CC------------STTGGGEEEECSCCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHH--hh------------hcCCCCeEEEeccccc
Confidence 35689999999999999999987 37999999 554432110 00 112357999999 888
Q ss_pred ccCCCCCCccEEEeccccc---cCChhHHH--HHHHHHHHcccCC-EEEEEecCC
Q 004178 605 VFDSRLHGFDIGTCLEVIE---HMEEDEAS--QFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 605 dlp~~d~sFDlVVc~eVLE---HL~~d~~~--~fleeI~rvLKPG-~LIISTPN~ 653 (770)
.++ ...||+|+|...+. +.. +... .+++.+.++|||| .+++.++..
T Consensus 143 ~l~--~~~fD~V~sd~~~~~g~~~~-d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 143 FIP--PERCDTLLCDIGESSPNPTV-EAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp TSC--CCCCSEEEECCCCCCSSHHH-HHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred cCC--cCCCCEEEECCccccCcchh-hHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 775 36899999976653 222 2221 3456688999999 777766654
No 256
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.61 E-value=7.5e-08 Score=101.01 Aligned_cols=93 Identities=9% Similarity=0.075 Sum_probs=72.2
Q ss_pred HHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEE
Q 004178 520 VEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLF 599 (770)
Q Consensus 520 ~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~ 599 (770)
.+.+++.+...++ +|||||||+|.++..|++.+ .+|+|+|+++.|++.+++++. ..+++++
T Consensus 36 ~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~---------------~~~v~vi 96 (271)
T 3fut_A 36 LRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLS---------------GLPVRLV 96 (271)
T ss_dssp HHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTT---------------TSSEEEE
T ss_pred HHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcC---------------CCCEEEE
Confidence 3456677777777 99999999999999999987 799999999999999988652 1479999
Q ss_pred ECCccccCCCC-CCccEEEeccccccCChhHHHH
Q 004178 600 DGSITVFDSRL-HGFDIGTCLEVIEHMEEDEASQ 632 (770)
Q Consensus 600 ~GDaedlp~~d-~sFDlVVc~eVLEHL~~d~~~~ 632 (770)
++|+.+++++. ..+|.|+++--. ++..+....
T Consensus 97 ~~D~l~~~~~~~~~~~~iv~NlPy-~iss~il~~ 129 (271)
T 3fut_A 97 FQDALLYPWEEVPQGSLLVANLPY-HIATPLVTR 129 (271)
T ss_dssp ESCGGGSCGGGSCTTEEEEEEECS-SCCHHHHHH
T ss_pred ECChhhCChhhccCccEEEecCcc-cccHHHHHH
Confidence 99999887753 368887776443 555333333
No 257
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.57 E-value=2.4e-07 Score=98.67 Aligned_cols=118 Identities=14% Similarity=0.079 Sum_probs=81.5
Q ss_pred HHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECC
Q 004178 523 ALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGS 602 (770)
Q Consensus 523 Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GD 602 (770)
+...+...++.+|||+|||+|..+..+++..++..+|+|+|+++.+++.+++++.. .+..++++.++|
T Consensus 94 ~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r------------~g~~~v~~~~~D 161 (309)
T 2b9e_A 94 PAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLAR------------AGVSCCELAEED 161 (309)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH------------TTCCSEEEEECC
T ss_pred HHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH------------cCCCeEEEEeCC
Confidence 34455667789999999999999999987532347999999999999999998853 244579999999
Q ss_pred ccccCCCC---CCccEEEe------ccccccCCh---------hH-------HHHHHHHHHHcccCCEEEEEecC
Q 004178 603 ITVFDSRL---HGFDIGTC------LEVIEHMEE---------DE-------ASQFGNIVLSSFRPRILIVSTPN 652 (770)
Q Consensus 603 aedlp~~d---~sFDlVVc------~eVLEHL~~---------d~-------~~~fleeI~rvLKPG~LIISTPN 652 (770)
+.+++... ..||.|++ .+++..-++ +. ...+++.+.++++.|.++.+|..
T Consensus 162 ~~~~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~gG~lvYsTCs 236 (309)
T 2b9e_A 162 FLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCS 236 (309)
T ss_dssp GGGSCTTCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTTCCEEEEEESC
T ss_pred hHhcCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccCCCEEEEECCC
Confidence 98876532 57999997 234432111 11 12345567777874577776654
No 258
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.54 E-value=3.8e-08 Score=102.22 Aligned_cols=88 Identities=14% Similarity=0.017 Sum_probs=66.0
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCCh-------HHHHHHHHHHhhhhhcccccCCCCCCC-
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQ-------KSLSRAAKIIHSKLSKKLDAAVPCTDV- 593 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISe-------emLe~ArkrL~~~~s~~~~~l~pr~~~- 593 (770)
.+.+.+...++.+|||+|||+|.++..|++.+ .+|+|+|+++ ++++.|++++... +.
T Consensus 74 ~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~g---~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~------------~~~ 138 (258)
T 2r6z_A 74 LIAKAVNHTAHPTVWDATAGLGRDSFVLASLG---LTVTAFEQHPAVACLLSDGIRRALLNPETQ------------DTA 138 (258)
T ss_dssp HHHHHTTGGGCCCEEETTCTTCHHHHHHHHTT---CCEEEEECCHHHHHHHHHHHHHHHHSHHHH------------HHH
T ss_pred HHHHHhCcCCcCeEEEeeCccCHHHHHHHHhC---CEEEEEECChhhhHHHHHHHHHHHhHHHhh------------CCc
Confidence 44455555557899999999999999999976 7999999999 9999998765321 11
Q ss_pred ccEEEEECCcccc-C-CCC--CCccEEEecccccc
Q 004178 594 KSAVLFDGSITVF-D-SRL--HGFDIGTCLEVIEH 624 (770)
Q Consensus 594 ~~Vef~~GDaedl-p-~~d--~sFDlVVc~eVLEH 624 (770)
.+++++++|+.++ + ..+ .+||+|++.-.++|
T Consensus 139 ~ri~~~~~d~~~~l~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 139 ARINLHFGNAAEQMPALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp TTEEEEESCHHHHHHHHHHHHCCCSEEEECCCC--
T ss_pred cCeEEEECCHHHHHHhhhccCCCccEEEECCCCCC
Confidence 2499999998874 2 223 68999999765555
No 259
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.51 E-value=1.3e-08 Score=103.47 Aligned_cols=81 Identities=11% Similarity=0.201 Sum_probs=65.2
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
+.+++.+...++.+|||+|||+|.++..|++.+ .+|+|+|+++.+++.|++++. ...++++.+
T Consensus 19 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~--------------~~~~v~~~~ 81 (245)
T 1yub_A 19 NQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLK--------------LNTRVTLIH 81 (245)
T ss_dssp HHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTT--------------TCSEEEECC
T ss_pred HHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhc--------------cCCceEEEE
Confidence 456666676678899999999999999999886 799999999999998876441 235799999
Q ss_pred CCccccCCCC-CCccEEEec
Q 004178 601 GSITVFDSRL-HGFDIGTCL 619 (770)
Q Consensus 601 GDaedlp~~d-~sFDlVVc~ 619 (770)
+|+.+++... +.| .|+++
T Consensus 82 ~D~~~~~~~~~~~f-~vv~n 100 (245)
T 1yub_A 82 QDILQFQFPNKQRY-KIVGN 100 (245)
T ss_dssp SCCTTTTCCCSSEE-EEEEE
T ss_pred CChhhcCcccCCCc-EEEEe
Confidence 9999887653 578 56554
No 260
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.49 E-value=1e-07 Score=105.61 Aligned_cols=119 Identities=14% Similarity=0.147 Sum_probs=85.8
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCC------------CCceEEEEeCChHHHHHHHHHHhhhhhcccccCC
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPT------------ALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAV 588 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~gg------------p~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~ 588 (770)
+++++.+.+..+.+|||.|||+|.++..+++... ...+++|+|+++.+++.|+.++..
T Consensus 161 ~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l---------- 230 (445)
T 2okc_A 161 QAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYL---------- 230 (445)
T ss_dssp HHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHH----------
T ss_pred HHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHH----------
Confidence 3566666666778999999999999988775410 125799999999999999887631
Q ss_pred CCCCCc--cEEEEECCccccCCCCCCccEEEeccccccCChh---------------HHHHHHHHHHHcccCC-EEEEEe
Q 004178 589 PCTDVK--SAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEED---------------EASQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 589 pr~~~~--~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d---------------~~~~fleeI~rvLKPG-~LIIST 650 (770)
.+.. ++.+.++|....+.. ..||+|+++-.+.+.... ....|++.+.+.|||| .+++.+
T Consensus 231 --~g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 231 --HGIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp --TTCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --hCCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 1221 577899998776544 489999997555443211 1136677899999998 777777
Q ss_pred cC
Q 004178 651 PN 652 (770)
Q Consensus 651 PN 652 (770)
|+
T Consensus 308 p~ 309 (445)
T 2okc_A 308 PD 309 (445)
T ss_dssp EH
T ss_pred CC
Confidence 75
No 261
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.48 E-value=4.3e-07 Score=93.71 Aligned_cols=89 Identities=16% Similarity=0.260 Sum_probs=67.4
Q ss_pred HHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEE
Q 004178 520 VEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLF 599 (770)
Q Consensus 520 ~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~ 599 (770)
.+.+++.+...++.+|||+|||+|.++..|++.+ ..+|+|+|+++.|++.++++ ...+++++
T Consensus 20 ~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~--~~~v~avEid~~~~~~~~~~----------------~~~~v~~i 81 (249)
T 3ftd_A 20 LKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHP--LKKLYVIELDREMVENLKSI----------------GDERLEVI 81 (249)
T ss_dssp HHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSC--CSEEEEECCCHHHHHHHTTS----------------CCTTEEEE
T ss_pred HHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcC--CCeEEEEECCHHHHHHHHhc----------------cCCCeEEE
Confidence 3456677777778999999999999999999884 27999999999999999762 12479999
Q ss_pred ECCccccCCCCCCccEEEeccccccCC
Q 004178 600 DGSITVFDSRLHGFDIGTCLEVIEHME 626 (770)
Q Consensus 600 ~GDaedlp~~d~sFDlVVc~eVLEHL~ 626 (770)
++|+.++++++..-+.++..+.-.++.
T Consensus 82 ~~D~~~~~~~~~~~~~~vv~NlPy~i~ 108 (249)
T 3ftd_A 82 NEDASKFPFCSLGKELKVVGNLPYNVA 108 (249)
T ss_dssp CSCTTTCCGGGSCSSEEEEEECCTTTH
T ss_pred EcchhhCChhHccCCcEEEEECchhcc
Confidence 999998876532113454455544554
No 262
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.43 E-value=2e-07 Score=99.12 Aligned_cols=84 Identities=18% Similarity=0.212 Sum_probs=67.3
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
.+++.+...++.+|||+|||+|.++..+++.. +..+|+|+|+|+.|++.|++++.. .+ .+++++++
T Consensus 17 e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~-~~~~VigvD~d~~al~~A~~~~~~------------~g-~~v~~v~~ 82 (301)
T 1m6y_A 17 EVIEFLKPEDEKIILDCTVGEGGHSRAILEHC-PGCRIIGIDVDSEVLRIAEEKLKE------------FS-DRVSLFKV 82 (301)
T ss_dssp HHHHHHCCCTTCEEEETTCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTGG------------GT-TTEEEEEC
T ss_pred HHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHh------------cC-CcEEEEEC
Confidence 45566666678899999999999999999875 247999999999999999987742 12 58999999
Q ss_pred CccccCC--C---CCCccEEEec
Q 004178 602 SITVFDS--R---LHGFDIGTCL 619 (770)
Q Consensus 602 Daedlp~--~---d~sFDlVVc~ 619 (770)
|+.+++. . ...||.|++.
T Consensus 83 d~~~l~~~l~~~g~~~~D~Vl~D 105 (301)
T 1m6y_A 83 SYREADFLLKTLGIEKVDGILMD 105 (301)
T ss_dssp CGGGHHHHHHHTTCSCEEEEEEE
T ss_pred CHHHHHHHHHhcCCCCCCEEEEc
Confidence 9988652 1 1579999874
No 263
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.42 E-value=2.7e-07 Score=100.91 Aligned_cols=113 Identities=15% Similarity=0.068 Sum_probs=75.6
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCC---CCCCccEEEEECCccccC
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVP---CTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~p---r~~~~~Vef~~GDaedlp 607 (770)
.+.+|||+|||+|.++..+++.. +..+|+++|+++++++.+++++............. ..+..++++.++|+.++.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~-~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALET-PAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHS-SCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHH
Confidence 68899999999999999998874 23679999999999999999885420000000000 002335999999987653
Q ss_pred CC-CCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEe
Q 004178 608 SR-LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 608 ~~-d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIST 650 (770)
.. ...||+|++. -.. ....+++.+.+.|||| .++++.
T Consensus 126 ~~~~~~fD~I~lD-P~~-----~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 126 AERHRYFHFIDLD-PFG-----SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHSTTCEEEEEEC-CSS-----CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhccCCCCEEEeC-CCC-----CHHHHHHHHHHhcCCCCEEEEEe
Confidence 22 3579999843 211 1135556788899998 555554
No 264
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.38 E-value=6.7e-07 Score=94.06 Aligned_cols=74 Identities=16% Similarity=0.272 Sum_probs=59.9
Q ss_pred HHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCC-CceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEE
Q 004178 520 VEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTA-LEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVL 598 (770)
Q Consensus 520 ~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp-~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef 598 (770)
.+.+++.+...++.+|||||||+|.++..|++.+.. ..+|+|+|+++.|++.++++. ..++++
T Consensus 31 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----------------~~~v~~ 94 (279)
T 3uzu_A 31 IDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----------------GELLEL 94 (279)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----------------GGGEEE
T ss_pred HHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----------------CCCcEE
Confidence 345667777777899999999999999999987621 133999999999999998852 137999
Q ss_pred EECCccccCCC
Q 004178 599 FDGSITVFDSR 609 (770)
Q Consensus 599 ~~GDaedlp~~ 609 (770)
+++|+.+++++
T Consensus 95 i~~D~~~~~~~ 105 (279)
T 3uzu_A 95 HAGDALTFDFG 105 (279)
T ss_dssp EESCGGGCCGG
T ss_pred EECChhcCChh
Confidence 99999988764
No 265
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.36 E-value=9.5e-07 Score=93.61 Aligned_cols=97 Identities=12% Similarity=0.147 Sum_probs=66.4
Q ss_pred hcCCCCEEEEEcCc------cchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEE-EE
Q 004178 528 KESCATTLVDFGCG------SGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVL-FD 600 (770)
Q Consensus 528 ~~~~~~rVLDIGCG------tG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef-~~ 600 (770)
...++.+|||+||| +|. ..+++..++..+|+|+|+++. + .++++ ++
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v-----------------~~v~~~i~ 112 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V-----------------SDADSTLI 112 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B-----------------CSSSEEEE
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C-----------------CCCEEEEE
Confidence 44567899999994 466 334444333479999999987 1 14778 99
Q ss_pred CCccccCCCCCCccEEEeccccc--------cCC-hhHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 601 GSITVFDSRLHGFDIGTCLEVIE--------HME-EDEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 601 GDaedlp~~d~sFDlVVc~eVLE--------HL~-~d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
+|+.++++. +.||+|++....+ +.. .+....+++++.++|||| .+++.+..
T Consensus 113 gD~~~~~~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 113 GDCATVHTA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp SCGGGCCCS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred CccccCCcc-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 999987654 6899999964322 111 122345667899999998 66665543
No 266
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.35 E-value=1.1e-06 Score=103.19 Aligned_cols=134 Identities=12% Similarity=0.042 Sum_probs=90.3
Q ss_pred chHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCC---------------------------------------
Q 004178 513 PPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYP--------------------------------------- 553 (770)
Q Consensus 513 PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~g--------------------------------------- 553 (770)
.|+.+.....++......++.+|||.+||+|.++...+...
T Consensus 172 apl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~ 251 (703)
T 3v97_A 172 APIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKG 251 (703)
T ss_dssp CSSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhc
Confidence 46666666677777776778899999999999998776431
Q ss_pred --CCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC--CCCccEEEeccc--cccCCh
Q 004178 554 --TALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR--LHGFDIGTCLEV--IEHMEE 627 (770)
Q Consensus 554 --gp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~--d~sFDlVVc~eV--LEHL~~ 627 (770)
.+..+|+|+|+++.|++.|++++... +....++|.++|+.++..+ .+.||+|+++=- ...-..
T Consensus 252 ~~~~~~~i~G~Did~~av~~A~~N~~~a-----------gv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~ 320 (703)
T 3v97_A 252 LAEYSSHFYGSDSDARVIQRARTNARLA-----------GIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSE 320 (703)
T ss_dssp HHHCCCCEEEEESCHHHHHHHHHHHHHT-----------TCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CC
T ss_pred cccCCccEEEEECCHHHHHHHHHHHHHc-----------CCCCceEEEECChhhCccccccCCCCEEEeCCCccccccch
Confidence 01147999999999999999987531 1223599999999887433 348999999722 111112
Q ss_pred hHHHHHHHH---HHHcccCC-EEEEEecCCchhH
Q 004178 628 DEASQFGNI---VLSSFRPR-ILIVSTPNYEYNA 657 (770)
Q Consensus 628 d~~~~flee---I~rvLKPG-~LIISTPN~efN~ 657 (770)
+....+.+. +.+.+.|| .+++-|++.++..
T Consensus 321 ~~l~~ly~~l~~~lk~~~~g~~~~ilt~~~~l~~ 354 (703)
T 3v97_A 321 PALIALHSLLGRIMKNQFGGWNLSLFSASPDLLS 354 (703)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEESCHHHHH
T ss_pred hHHHHHHHHHHHHHHhhCCCCeEEEEeCCHHHHH
Confidence 233333333 34444578 8888888865543
No 267
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.29 E-value=5.3e-07 Score=93.33 Aligned_cols=71 Identities=10% Similarity=0.188 Sum_probs=56.6
Q ss_pred HHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCce--EEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEE
Q 004178 520 VEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEK--IVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAV 597 (770)
Q Consensus 520 ~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~--VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Ve 597 (770)
.+.+++.+...++.+|||||||+|.++. +++ + .+ |+|+|+++.|++.+++++. ..++++
T Consensus 10 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~---~~~~v~avEid~~~~~~a~~~~~--------------~~~~v~ 70 (252)
T 1qyr_A 10 IDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-E---RLDQLTVIELDRDLAARLQTHPF--------------LGPKLT 70 (252)
T ss_dssp HHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-T---TCSCEEEECCCHHHHHHHHTCTT--------------TGGGEE
T ss_pred HHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-C---CCCeEEEEECCHHHHHHHHHHhc--------------cCCceE
Confidence 3456666677778899999999999999 764 4 45 9999999999999987542 124899
Q ss_pred EEECCccccCCC
Q 004178 598 LFDGSITVFDSR 609 (770)
Q Consensus 598 f~~GDaedlp~~ 609 (770)
++++|+.++++.
T Consensus 71 ~i~~D~~~~~~~ 82 (252)
T 1qyr_A 71 IYQQDAMTFNFG 82 (252)
T ss_dssp EECSCGGGCCHH
T ss_pred EEECchhhCCHH
Confidence 999999887653
No 268
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.21 E-value=2.3e-06 Score=93.48 Aligned_cols=113 Identities=12% Similarity=0.106 Sum_probs=75.0
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC--
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS-- 608 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~-- 608 (770)
++++|||||||+|.++..+++++ + .+|++||+++.+++.|++++....... +. ....++++++.+|+.+...
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~-~-~~Vt~VEID~~vie~Ar~~~~~l~~~~---l~-dp~~~rv~vi~~Da~~~L~~~ 261 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK-P-KMVTMVEIDQMVIDGCKKYMRKTCGDV---LD-NLKGDCYQVLIEDCIPVLKRY 261 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC-C-SEEEEEESCHHHHHHHHHHCCC----C---CS-SSEETTEEEEESCHHHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCC-C-CEEEEEECCHHHHHHHHHHHHHhcccc---cc-ccCCCcEEEEECcHHHHHHhh
Confidence 57899999999999999999886 3 899999999999999998763211000 00 0001379999999876443
Q ss_pred --CCCCccEEEecccc-cc--CCh-hHHHHHHHHH----HHcccCC-EEEEE
Q 004178 609 --RLHGFDIGTCLEVI-EH--MEE-DEASQFGNIV----LSSFRPR-ILIVS 649 (770)
Q Consensus 609 --~d~sFDlVVc~eVL-EH--L~~-d~~~~fleeI----~rvLKPG-~LIIS 649 (770)
..+.||+|++--.- .. .+. -....|.+.+ .++|+|| ++++.
T Consensus 262 ~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~q 313 (364)
T 2qfm_A 262 AKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 313 (364)
T ss_dssp HHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred hccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEE
Confidence 24789999985321 11 010 0113444445 8999999 44443
No 269
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.16 E-value=1.2e-06 Score=97.07 Aligned_cols=74 Identities=16% Similarity=0.157 Sum_probs=61.1
Q ss_pred CCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc-CC-C
Q 004178 532 ATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF-DS-R 609 (770)
Q Consensus 532 ~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl-p~-~ 609 (770)
+.+|||+|||+|..+..|++.+ .+|+|+|+++.|++.|++++.... .+..+++++++|+.+. +. .
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g---~~V~~VD~s~~~l~~Ar~N~~~~~----------~gl~~i~~i~~Da~~~L~~~~ 160 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKA---SQGIYIERNDETAVAARHNIPLLL----------NEGKDVNILTGDFKEYLPLIK 160 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTC---SEEEEEESCHHHHHHHHHHHHHHS----------CTTCEEEEEESCGGGSHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHhHHHhc----------cCCCcEEEEECcHHHhhhhcc
Confidence 7899999999999999999887 799999999999999999875320 0235799999999874 32 2
Q ss_pred CCCccEEEe
Q 004178 610 LHGFDIGTC 618 (770)
Q Consensus 610 d~sFDlVVc 618 (770)
...||+|++
T Consensus 161 ~~~fDvV~l 169 (410)
T 3ll7_A 161 TFHPDYIYV 169 (410)
T ss_dssp HHCCSEEEE
T ss_pred CCCceEEEE
Confidence 358999998
No 270
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.12 E-value=3.8e-06 Score=95.86 Aligned_cols=119 Identities=13% Similarity=0.137 Sum_probs=82.4
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCC---C--------------CceEEEEeCChHHHHHHHHHHhhhhhccc
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPT---A--------------LEKIVGVDISQKSLSRAAKIIHSKLSKKL 584 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~gg---p--------------~~~VvGVDISeemLe~ArkrL~~~~s~~~ 584 (770)
++++.+.+..+.+|||.|||+|.++..+++... . ...++|+|+++.+++.|+.++.-
T Consensus 160 ~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l------ 233 (541)
T 2ar0_A 160 TIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLL------ 233 (541)
T ss_dssp HHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHT------
T ss_pred HHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHH------
Confidence 455666766788999999999999987765320 0 13799999999999999887631
Q ss_pred ccCCCCCCCc-----cEEEEECCccccC-CCCCCccEEEeccccccCC------------hhHHHHHHHHHHHcccCC-E
Q 004178 585 DAAVPCTDVK-----SAVLFDGSITVFD-SRLHGFDIGTCLEVIEHME------------EDEASQFGNIVLSSFRPR-I 645 (770)
Q Consensus 585 ~~l~pr~~~~-----~Vef~~GDaedlp-~~d~sFDlVVc~eVLEHL~------------~d~~~~fleeI~rvLKPG-~ 645 (770)
.+.. ++.+.++|....+ .....||+|+++=-+.... .+....|+..+.+.|||| .
T Consensus 234 ------~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr 307 (541)
T 2ar0_A 234 ------HDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGR 307 (541)
T ss_dssp ------TTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEE
T ss_pred ------hCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCE
Confidence 1222 2678899976543 2356899999964332211 111235677899999998 7
Q ss_pred EEEEecC
Q 004178 646 LIVSTPN 652 (770)
Q Consensus 646 LIISTPN 652 (770)
+.+.+|+
T Consensus 308 ~a~V~p~ 314 (541)
T 2ar0_A 308 AAVVVPD 314 (541)
T ss_dssp EEEEEEH
T ss_pred EEEEecC
Confidence 7777776
No 271
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.12 E-value=4.8e-06 Score=91.74 Aligned_cols=103 Identities=18% Similarity=0.119 Sum_probs=75.2
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCc-c-EEEEECCccccC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVK-S-AVLFDGSITVFD 607 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~-~-Vef~~GDaedlp 607 (770)
.++.+|||++||+|.++..++...+...+|+++|+++.+++.+++++.. ++.. + ++++++|+.++.
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~------------Ngl~~~~v~v~~~Da~~~l 118 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKL------------NNIPEDRYEIHGMEANFFL 118 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHH------------TTCCGGGEEEECSCHHHHH
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH------------hCCCCceEEEEeCCHHHHH
Confidence 4578999999999999999887532236899999999999999998852 2333 3 999999986643
Q ss_pred C--CCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEe
Q 004178 608 S--RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 608 ~--~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIST 650 (770)
. ....||+|++.- . ... ..+.+.+.+.|+|| +++++.
T Consensus 119 ~~~~~~~fD~V~lDP-~-g~~----~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 119 RKEWGFGFDYVDLDP-F-GTP----VPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp HSCCSSCEEEEEECC-S-SCC----HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHhhCCCCcEEEECC-C-cCH----HHHHHHHHHHhCCCCEEEEEe
Confidence 2 235799998754 1 111 23556788899998 555544
No 272
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.93 E-value=5.8e-05 Score=80.29 Aligned_cols=109 Identities=18% Similarity=0.133 Sum_probs=80.4
Q ss_pred cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC-
Q 004178 529 ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD- 607 (770)
Q Consensus 529 ~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp- 607 (770)
..++++||-||-|.|..++.++++. +..+|+.+||++.+++.|++.+...... ....++++++.+|+...-
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~-------~~~dpRv~v~~~Dg~~~l~ 152 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAG-------SYDDPRFKLVIDDGVNFVN 152 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTT-------GGGCTTEEEEESCTTTTTS
T ss_pred CCCCCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCcccccc-------ccCCCcEEEEechHHHHHh
Confidence 4468999999999999999999986 5689999999999999999876432211 113468999999987643
Q ss_pred CCCCCccEEEecc-----ccccCChhHHHHHHHHHHHcccCCEEEE
Q 004178 608 SRLHGFDIGTCLE-----VIEHMEEDEASQFGNIVLSSFRPRILIV 648 (770)
Q Consensus 608 ~~d~sFDlVVc~e-----VLEHL~~d~~~~fleeI~rvLKPG~LII 648 (770)
...+.||+|+.-. .-.++.. ..|.+.+.+.|+||.+++
T Consensus 153 ~~~~~yDvIi~D~~dp~~~~~~L~t---~eFy~~~~~~L~p~Gv~v 195 (294)
T 3o4f_A 153 QTSQTFDVIISDCTDPIGPGESLFT---SAFYEGCKRCLNPGGIFV 195 (294)
T ss_dssp CSSCCEEEEEESCCCCCCTTCCSSC---CHHHHHHHHTEEEEEEEE
T ss_pred hccccCCEEEEeCCCcCCCchhhcC---HHHHHHHHHHhCCCCEEE
Confidence 3457899998632 2223321 245567999999994444
No 273
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.93 E-value=1.5e-05 Score=83.08 Aligned_cols=96 Identities=9% Similarity=-0.034 Sum_probs=68.0
Q ss_pred HHHHHHhhcCCC--CEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCC-C-ccE
Q 004178 521 EYALQHIKESCA--TTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTD-V-KSA 596 (770)
Q Consensus 521 e~Il~~L~~~~~--~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~-~-~~V 596 (770)
+.+.+.+...++ .+|||+|||.|..+..++..+ .+|+|+|+++.+.+.+++.+....... ..++ . .++
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g---~~V~~vE~~~~~~~l~~~~l~~a~~~~-----~~~~~l~~~i 147 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVG---CRVRMLERNPVVAALLDDGLARGYADA-----EIGGWLQERL 147 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHT---CCEEEEECCHHHHHHHHHHHHHHHHCT-----TTHHHHHHHE
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHHHhhH-----hhhhhhhcCE
Confidence 345566655556 899999999999999999886 689999999998777776654321100 0011 1 479
Q ss_pred EEEECCcccc-CCCCCCccEEEecccccc
Q 004178 597 VLFDGSITVF-DSRLHGFDIGTCLEVIEH 624 (770)
Q Consensus 597 ef~~GDaedl-p~~d~sFDlVVc~eVLEH 624 (770)
+++++|+.++ +.....||+|++.=.+.+
T Consensus 148 ~~~~~D~~~~L~~~~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 148 QLIHASSLTALTDITPRPQVVYLDPMFPH 176 (258)
T ss_dssp EEEESCHHHHSTTCSSCCSEEEECCCCCC
T ss_pred EEEECCHHHHHHhCcccCCEEEEcCCCCC
Confidence 9999998774 322247999998766655
No 274
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.85 E-value=7.5e-05 Score=85.42 Aligned_cols=119 Identities=16% Similarity=0.105 Sum_probs=82.0
Q ss_pred HHHHHhh----cCCCCEEEEEcCccchHHHHHhcCC--CCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCC--
Q 004178 522 YALQHIK----ESCATTLVDFGCGSGSLLDSLLDYP--TALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDV-- 593 (770)
Q Consensus 522 ~Il~~L~----~~~~~rVLDIGCGtG~ll~~LAk~g--gp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~-- 593 (770)
++++.+. ...+.+|+|.+||+|.++..+++.. .....++|+|+++.++..|+.++.- .+.
T Consensus 208 lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l------------~gi~~ 275 (542)
T 3lkd_A 208 LMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMIL------------HGVPI 275 (542)
T ss_dssp HHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHH------------TTCCG
T ss_pred HHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHH------------cCCCc
Confidence 4444444 4467899999999999988776652 1236899999999999999887631 122
Q ss_pred ccEEEEECCcccc--C-CCCCCccEEEecc--cccc-----------------CCh--hHHHHHHHHHHHccc-CC-EEE
Q 004178 594 KSAVLFDGSITVF--D-SRLHGFDIGTCLE--VIEH-----------------MEE--DEASQFGNIVLSSFR-PR-ILI 647 (770)
Q Consensus 594 ~~Vef~~GDaedl--p-~~d~sFDlVVc~e--VLEH-----------------L~~--d~~~~fleeI~rvLK-PG-~LI 647 (770)
.++.+.++|.... + .....||+|+++= ...+ +++ ...-.|+..+.+.|+ || .+.
T Consensus 276 ~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a 355 (542)
T 3lkd_A 276 ENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMA 355 (542)
T ss_dssp GGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEE
T ss_pred CccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEE
Confidence 4688999997665 3 3457899999851 1000 110 001246778999999 87 777
Q ss_pred EEecC
Q 004178 648 VSTPN 652 (770)
Q Consensus 648 ISTPN 652 (770)
+.+|+
T Consensus 356 ~VlP~ 360 (542)
T 3lkd_A 356 IVLPH 360 (542)
T ss_dssp EEEET
T ss_pred EEecc
Confidence 77777
No 275
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.78 E-value=0.00027 Score=71.37 Aligned_cols=97 Identities=8% Similarity=0.030 Sum_probs=68.7
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCC--CccEEEEECCcccc--
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTD--VKSAVLFDGSITVF-- 606 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~--~~~Vef~~GDaedl-- 606 (770)
++++|||+||| +-+..+++.. ..+|+.+|.+++..+.|++++... +. ..+|+++.||+.+.
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~--~g~VvtvE~d~~~~~~ar~~l~~~-----------g~~~~~~I~~~~gda~~~~~ 94 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELP--GKHVTSVESDRAWARMMKAWLAAN-----------PPAEGTEVNIVWTDIGPTGD 94 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTST--TCEEEEEESCHHHHHHHHHHHHHS-----------CCCTTCEEEEEECCCSSBCG
T ss_pred CCCEEEEECch--HHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHHHHc-----------CCCCCCceEEEEeCchhhhc
Confidence 47899999985 6777777752 389999999999999999988531 11 45899999997542
Q ss_pred -------------C--------C-CCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEE
Q 004178 607 -------------D--------S-RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVS 649 (770)
Q Consensus 607 -------------p--------~-~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIIS 649 (770)
+ . ..+.||+|+.-.-. .. .....+.+.|+||.+++.
T Consensus 95 wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k------~~-~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 95 WGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRF------RV-GCALATAFSITRPVTLLF 152 (202)
T ss_dssp GGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSS------HH-HHHHHHHHHCSSCEEEEE
T ss_pred ccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCC------ch-hHHHHHHHhcCCCeEEEE
Confidence 1 1 23679999776532 11 223346789999955443
No 276
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.72 E-value=0.00019 Score=85.25 Aligned_cols=116 Identities=11% Similarity=0.085 Sum_probs=75.4
Q ss_pred CCCEEEEEcCccchHHHHHhcCCC--CCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC-
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPT--ALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD- 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~gg--p~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp- 607 (770)
.+.+|||.|||+|.++..+++..+ ...+++|+|+++.+++.|+.++....+.. ..+.....+...|+....
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~L------lhGi~~~~I~~dD~L~~~~ 394 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQL------VSSNNAPTITGEDVCSLNP 394 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTT------CBTTBCCEEECCCGGGCCG
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhh------hcCCCcceEEecchhcccc
Confidence 478999999999999999887652 12579999999999999944332111000 012223455566665532
Q ss_pred CCCCCccEEEecccc---ccCCh------------------------hHHHHHHHHHHHcccCC-EEEEEecC
Q 004178 608 SRLHGFDIGTCLEVI---EHMEE------------------------DEASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 608 ~~d~sFDlVVc~eVL---EHL~~------------------------d~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
.....||+|+++=-. ...+. +....|++.+.+.|+|| .+.+.+|+
T Consensus 395 ~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 395 EDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp GGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred cccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 234689999995221 11110 11335677799999998 88888887
No 277
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.71 E-value=6.2e-05 Score=87.62 Aligned_cols=103 Identities=10% Similarity=0.071 Sum_probs=65.9
Q ss_pred CCEEEEEcCccchHHHHHh---cCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC
Q 004178 532 ATTLVDFGCGSGSLLDSLL---DYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS 608 (770)
Q Consensus 532 ~~rVLDIGCGtG~ll~~LA---k~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~ 608 (770)
...|||+|||+|-+....+ +..+...+|++||-++ +...|++..... +...+|++++||+++...
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N-----------~~~dkVtVI~gd~eev~L 425 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFE-----------EWGSQVTVVSSDMREWVA 425 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHH-----------TTGGGEEEEESCTTTCCC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhc-----------cCCCeEEEEeCcceeccC
Confidence 4579999999999844333 3332224799999997 555666655321 234579999999999876
Q ss_pred CCCCccEEEeccccccCC-hhHHHHHHHHHHHcccCCEEEE
Q 004178 609 RLHGFDIGTCLEVIEHME-EDEASQFGNIVLSSFRPRILIV 648 (770)
Q Consensus 609 ~d~sFDlVVc~eVLEHL~-~d~~~~fleeI~rvLKPG~LII 648 (770)
+ ..+|+||+=.+ ..+- .+-....+....+.||||.++|
T Consensus 426 P-EKVDIIVSEwM-G~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 426 P-EKADIIVSELL-GSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp S-SCEEEEECCCC-BTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred C-cccCEEEEEcC-cccccccCCHHHHHHHHHhcCCCcEEc
Confidence 5 68999998211 1111 0111123344678999985544
No 278
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.65 E-value=5.1e-05 Score=86.76 Aligned_cols=119 Identities=11% Similarity=-0.009 Sum_probs=77.6
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCC--------------CCceEEEEeCChHHHHHHHHHHhhhhhcccccC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPT--------------ALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAA 587 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~gg--------------p~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l 587 (770)
++++.+.+..+ +|||.+||+|.++..+++... ....++|+|+++.++..|+.++.-.
T Consensus 236 lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~-------- 306 (544)
T 3khk_A 236 LIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIR-------- 306 (544)
T ss_dssp HHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHT--------
T ss_pred HHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHh--------
Confidence 45555555443 999999999999887654210 0258999999999999998876311
Q ss_pred CCCCCCccEEEEECCccccC-CCCCCccEEEecccccc-------------------------CCh--hHHHHHHHHHHH
Q 004178 588 VPCTDVKSAVLFDGSITVFD-SRLHGFDIGTCLEVIEH-------------------------MEE--DEASQFGNIVLS 639 (770)
Q Consensus 588 ~pr~~~~~Vef~~GDaedlp-~~d~sFDlVVc~eVLEH-------------------------L~~--d~~~~fleeI~r 639 (770)
+...++.+.++|....+ .....||+|+++=-+.. +++ ...-.|+..+.+
T Consensus 307 ---gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~ 383 (544)
T 3khk_A 307 ---GIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLY 383 (544)
T ss_dssp ---TCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHH
T ss_pred ---CCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHH
Confidence 11123444777865443 34578999999421110 111 011256778999
Q ss_pred cccCC-EEEEEecC
Q 004178 640 SFRPR-ILIVSTPN 652 (770)
Q Consensus 640 vLKPG-~LIISTPN 652 (770)
.|+|| .+.+.+|+
T Consensus 384 ~Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 384 HLAPTGSMALLLAN 397 (544)
T ss_dssp TEEEEEEEEEEEET
T ss_pred HhccCceEEEEecc
Confidence 99998 77777887
No 279
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.63 E-value=7e-05 Score=79.30 Aligned_cols=78 Identities=17% Similarity=0.244 Sum_probs=63.9
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG 601 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G 601 (770)
.+++.+...++..+||.+||.|..+..|++.. .+|+|+|.++.+++.|++ +. . .+++++++
T Consensus 13 e~le~L~~~~gg~~VD~T~G~GGHS~~il~~~---g~VigiD~Dp~Ai~~A~~-L~-------------~--~rv~lv~~ 73 (285)
T 1wg8_A 13 EALDLLAVRPGGVYVDATLGGAGHARGILERG---GRVIGLDQDPEAVARAKG-LH-------------L--PGLTVVQG 73 (285)
T ss_dssp HHHHHHTCCTTCEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHH-TC-------------C--TTEEEEES
T ss_pred HHHHhhCCCCCCEEEEeCCCCcHHHHHHHHCC---CEEEEEeCCHHHHHHHHh-hc-------------c--CCEEEEEC
Confidence 45566677778999999999999999999984 799999999999999987 62 1 48999999
Q ss_pred CccccCC-----CCCCccEEEe
Q 004178 602 SITVFDS-----RLHGFDIGTC 618 (770)
Q Consensus 602 Daedlp~-----~d~sFDlVVc 618 (770)
+..+++. ....||.|++
T Consensus 74 ~f~~l~~~L~~~g~~~vDgIL~ 95 (285)
T 1wg8_A 74 NFRHLKRHLAALGVERVDGILA 95 (285)
T ss_dssp CGGGHHHHHHHTTCSCEEEEEE
T ss_pred CcchHHHHHHHcCCCCcCEEEe
Confidence 9887643 1246888886
No 280
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.62 E-value=0.00017 Score=76.02 Aligned_cols=122 Identities=9% Similarity=0.048 Sum_probs=73.6
Q ss_pred CchHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCC
Q 004178 512 SPPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCT 591 (770)
Q Consensus 512 ~PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~ 591 (770)
|.+-....+..+.+.....++.+|||+|||.|.++..+++.. +...|+|+|++.++.... .. . ..
T Consensus 55 YrSRaA~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGvDl~~~p------i~------~--~~ 119 (277)
T 3evf_A 55 AVSRGTAKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGRDGHEKP------MN------V--QS 119 (277)
T ss_dssp CSSTHHHHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTCCCC------CC------C--CB
T ss_pred ccccHHHHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhc-CCCcceeEEEeccCcccc------cc------c--Cc
Confidence 333334444445454444567799999999999999887764 246889999985531000 00 0 00
Q ss_pred CCccEEEEECCccccCCCCCCccEEEeccccc----cCChhHHHHHHHHHHHcccCC-EEEE
Q 004178 592 DVKSAVLFDGSITVFDSRLHGFDIGTCLEVIE----HMEEDEASQFGNIVLSSFRPR-ILIV 648 (770)
Q Consensus 592 ~~~~Vef~~GDaedlp~~d~sFDlVVc~eVLE----HL~~d~~~~fleeI~rvLKPG-~LII 648 (770)
...++..++++++...+....||+|+|-.+.+ .++......+++.+.++|+|| .-++
T Consensus 120 ~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV 181 (277)
T 3evf_A 120 LGWNIITFKDKTDIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFC 181 (277)
T ss_dssp TTGGGEEEECSCCTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred CCCCeEEEeccceehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 11255556777655566667899999977555 121111112456678999998 4433
No 281
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.58 E-value=6.1e-05 Score=88.24 Aligned_cols=105 Identities=10% Similarity=0.090 Sum_probs=67.0
Q ss_pred CCEEEEEcCccchHHHHHhcC---CC---------CCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEE
Q 004178 532 ATTLVDFGCGSGSLLDSLLDY---PT---------ALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLF 599 (770)
Q Consensus 532 ~~rVLDIGCGtG~ll~~LAk~---gg---------p~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~ 599 (770)
...|||||||+|.+....++. .+ ...+|++||.++.++...+.+... +...+|+++
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~N------------g~~d~VtVI 477 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVR------------TWKRRVTII 477 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHH------------TTTTCSEEE
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhc------------CCCCeEEEE
Confidence 468999999999996432111 10 124999999999877665554321 123469999
Q ss_pred ECCccccCCC-----CCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEE
Q 004178 600 DGSITVFDSR-----LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIV 648 (770)
Q Consensus 600 ~GDaedlp~~-----d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LII 648 (770)
++|++++..+ ...+|+||+=..=..+..+.....+..+.+.||||.++|
T Consensus 478 ~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 478 ESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp ESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred eCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 9999987652 478999988433212121212234445678999984443
No 282
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.38 E-value=0.00026 Score=73.56 Aligned_cols=118 Identities=11% Similarity=-0.037 Sum_probs=68.2
Q ss_pred CCCCEEEEEcCccchHHHHHhcCC------CC-----CceEEEEeCCh---HHHH-----------HHHHHHhhhhhc--
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYP------TA-----LEKIVGVDISQ---KSLS-----------RAAKIIHSKLSK-- 582 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~g------gp-----~~~VvGVDISe---emLe-----------~ArkrL~~~~s~-- 582 (770)
.+..+|||+|+|+|..+..+++.. .| ..+++++|..+ +++. .|++.+..+...
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 345799999999999987765431 12 25899999876 5555 344443321000
Q ss_pred -ccccCCCCCCCccEEEEECCccc-cCCCC----CCccEEEecc-ccccCChhHHHHHHHHHHHcccCCEEEE
Q 004178 583 -KLDAAVPCTDVKSAVLFDGSITV-FDSRL----HGFDIGTCLE-VIEHMEEDEASQFGNIVLSSFRPRILIV 648 (770)
Q Consensus 583 -~~~~l~pr~~~~~Vef~~GDaed-lp~~d----~sFDlVVc~e-VLEHL~~d~~~~fleeI~rvLKPG~LII 648 (770)
.... .-..+..+++++.||+.+ ++... ..||+|+.-. .-...++--...+++.++++|+||.+++
T Consensus 139 g~~r~-~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~ 210 (257)
T 2qy6_A 139 GCHRL-LLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLA 210 (257)
T ss_dssp EEEEE-EEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEE
T ss_pred chhhe-eccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEE
Confidence 0000 001123578999999877 33322 2799998743 2221221001345567999999995444
No 283
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.32 E-value=0.00081 Score=73.69 Aligned_cols=122 Identities=11% Similarity=0.068 Sum_probs=76.0
Q ss_pred CCEEEEEcCccchHHHHHh--------cC------CCCCceEEEEeCChHHHHHHHHHHhhhhhccc--ccCC-CCCCCc
Q 004178 532 ATTLVDFGCGSGSLLDSLL--------DY------PTALEKIVGVDISQKSLSRAAKIIHSKLSKKL--DAAV-PCTDVK 594 (770)
Q Consensus 532 ~~rVLDIGCGtG~ll~~LA--------k~------ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~--~~l~-pr~~~~ 594 (770)
..+|+|+|||+|.++..+. +. ..+..+|+.-|+-...-...-+.+........ .+.. ......
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 5789999999999987662 11 12568899999877655444444422100000 0000 000011
Q ss_pred cEEEEECCccccCCCCCCccEEEeccccccCChh------------------------------------HHHHHHHHHH
Q 004178 595 SAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEED------------------------------------EASQFGNIVL 638 (770)
Q Consensus 595 ~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d------------------------------------~~~~fleeI~ 638 (770)
-+.-+-|+.....+++++||+|+++.+|||+... +...|++..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1333445555566778999999999999998721 3455677889
Q ss_pred HcccCC-EEEEEecCC
Q 004178 639 SSFRPR-ILIVSTPNY 653 (770)
Q Consensus 639 rvLKPG-~LIISTPN~ 653 (770)
+.|+|| .+++++...
T Consensus 213 ~eL~pGG~mvl~~~gr 228 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGR 228 (374)
T ss_dssp HHEEEEEEEEEEEEEC
T ss_pred HHhCCCCEEEEEEecC
Confidence 999998 777776654
No 284
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.30 E-value=0.00073 Score=74.03 Aligned_cols=72 Identities=15% Similarity=0.086 Sum_probs=57.9
Q ss_pred cCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC
Q 004178 529 ESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS 608 (770)
Q Consensus 529 ~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~ 608 (770)
..++.+|||+||+.|.++..|++++ .+|+|||+.+ |-.. +. ..++|+++++|+....+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg---~~V~aVD~~~-l~~~----l~--------------~~~~V~~~~~d~~~~~~ 266 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRN---MWVYSVDNGP-MAQS----LM--------------DTGQVTWLREDGFKFRP 266 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTT---CEEEEECSSC-CCHH----HH--------------TTTCEEEECSCTTTCCC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCC---CEEEEEEhhh-cChh----hc--------------cCCCeEEEeCccccccC
Confidence 3468999999999999999999987 7999999864 1111 10 23589999999988877
Q ss_pred CCCCccEEEecccc
Q 004178 609 RLHGFDIGTCLEVI 622 (770)
Q Consensus 609 ~d~sFDlVVc~eVL 622 (770)
....||+|+|-.+.
T Consensus 267 ~~~~~D~vvsDm~~ 280 (375)
T 4auk_A 267 TRSNISWMVCDMVE 280 (375)
T ss_dssp CSSCEEEEEECCSS
T ss_pred CCCCcCEEEEcCCC
Confidence 77889999997765
No 285
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.26 E-value=0.00014 Score=76.73 Aligned_cols=115 Identities=13% Similarity=0.116 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCC
Q 004178 514 PLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDV 593 (770)
Q Consensus 514 PL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~ 593 (770)
+-....+..+.+.....++.+|||+|||.|.++...++.. +...|+|+|+...+...+.. . ....
T Consensus 73 SRAAfKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d~~~~pi~-~-------------~~~g 137 (282)
T 3gcz_A 73 SRGSAKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQGHEKPIM-R-------------TTLG 137 (282)
T ss_dssp STHHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCC-C-------------CBTT
T ss_pred cHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccCccccccc-c-------------ccCC
Confidence 3333344444444445567799999999999999888654 34689999998764221110 0 0011
Q ss_pred ccEEEEECCccccCCCCCCccEEEeccccccCCh---hH--HHHHHHHHHHcccCC
Q 004178 594 KSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEE---DE--ASQFGNIVLSSFRPR 644 (770)
Q Consensus 594 ~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~---d~--~~~fleeI~rvLKPG 644 (770)
.++.....++.........+|+|+|-.+.. ... |. ...+++-+..+|+||
T Consensus 138 ~~ii~~~~~~dv~~l~~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g 192 (282)
T 3gcz_A 138 WNLIRFKDKTDVFNMEVIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEG 192 (282)
T ss_dssp GGGEEEECSCCGGGSCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEeeCCcchhhcCCCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCC
Confidence 233344433333334457899999977765 221 11 113455567889887
No 286
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.20 E-value=0.0013 Score=72.24 Aligned_cols=109 Identities=14% Similarity=0.036 Sum_probs=70.9
Q ss_pred CCEEEEEcCccchHHHHHhcC----------------CCCCceEEEEeCC-----------hHHHHHHHHHHhhhhhccc
Q 004178 532 ATTLVDFGCGSGSLLDSLLDY----------------PTALEKIVGVDIS-----------QKSLSRAAKIIHSKLSKKL 584 (770)
Q Consensus 532 ~~rVLDIGCGtG~ll~~LAk~----------------ggp~~~VvGVDIS-----------eemLe~ArkrL~~~~s~~~ 584 (770)
.-+|+|+|||+|.++..+... ..|..+|+.-|+- +.+.+.+++..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~-------- 124 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKEN-------- 124 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHT--------
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhc--------
Confidence 578999999999988766532 1245789999987 33333322211
Q ss_pred ccCCCCCCCccEEEEEC---CccccCCCCCCccEEEeccccccCChhH--------------------------------
Q 004178 585 DAAVPCTDVKSAVLFDG---SITVFDSRLHGFDIGTCLEVIEHMEEDE-------------------------------- 629 (770)
Q Consensus 585 ~~l~pr~~~~~Vef~~G---Daedlp~~d~sFDlVVc~eVLEHL~~d~-------------------------------- 629 (770)
+...+..|..| +.....++.++||+|+++.+|||+..-+
T Consensus 125 ------g~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~ 198 (384)
T 2efj_A 125 ------GRKIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLD 198 (384)
T ss_dssp ------CCCTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHH
T ss_pred ------cCCCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHH
Confidence 11112244444 4455566789999999999999986321
Q ss_pred -----HHHHHHHHHHcccCC-EEEEEecCCc
Q 004178 630 -----ASQFGNIVLSSFRPR-ILIVSTPNYE 654 (770)
Q Consensus 630 -----~~~fleeI~rvLKPG-~LIISTPN~e 654 (770)
...|++..++.|+|| .+++++....
T Consensus 199 Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~gr~ 229 (384)
T 2efj_A 199 QFTKDFTTFLRIHSEELISRGRMLLTFICKE 229 (384)
T ss_dssp HHHHHHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHhccCCeEEEEEecCC
Confidence 122355568999998 7777777653
No 287
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.17 E-value=0.00073 Score=73.67 Aligned_cols=114 Identities=11% Similarity=0.022 Sum_probs=78.7
Q ss_pred CCEEEEEcCccchHHHHHhcC---------------CCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccE
Q 004178 532 ATTLVDFGCGSGSLLDSLLDY---------------PTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSA 596 (770)
Q Consensus 532 ~~rVLDIGCGtG~ll~~LAk~---------------ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~V 596 (770)
.-+|+|+||++|.++..+... ..|..+|+..|+........-+.+.... ...+.--+
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~--------~~~~~~f~ 123 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN--------DVDGVCFI 123 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC--------SCTTCEEE
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc--------ccCCCEEE
Confidence 467999999999888765544 3456899999999888877766553210 00111112
Q ss_pred EEEECCccccCCCCCCccEEEeccccccCChh-------------------------------HHHHHHHHHHHcccCC-
Q 004178 597 VLFDGSITVFDSRLHGFDIGTCLEVIEHMEED-------------------------------EASQFGNIVLSSFRPR- 644 (770)
Q Consensus 597 ef~~GDaedlp~~d~sFDlVVc~eVLEHL~~d-------------------------------~~~~fleeI~rvLKPG- 644 (770)
.-.-|+.....++.+++|+|+++.++||+..- +...|++..++.|+||
T Consensus 124 ~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG 203 (359)
T 1m6e_X 124 NGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGG 203 (359)
T ss_dssp EEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTC
T ss_pred EecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 33345566667778999999999999998631 2345677789999998
Q ss_pred EEEEEecCC
Q 004178 645 ILIVSTPNY 653 (770)
Q Consensus 645 ~LIISTPN~ 653 (770)
.+++++...
T Consensus 204 ~mvl~~~gr 212 (359)
T 1m6e_X 204 RMVLTILGR 212 (359)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEecC
Confidence 777766643
No 288
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.16 E-value=0.00065 Score=65.73 Aligned_cols=97 Identities=18% Similarity=0.151 Sum_probs=61.4
Q ss_pred HHHHHHHhhcCCCCEEEEEcCccc-hHHHHHhc-CCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEE
Q 004178 520 VEYALQHIKESCATTLVDFGCGSG-SLLDSLLD-YPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAV 597 (770)
Q Consensus 520 ~e~Il~~L~~~~~~rVLDIGCGtG-~ll~~LAk-~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Ve 597 (770)
.+++.+... .+.+|||||||.| ..+..|++ .+ ..|+++|+++.+++
T Consensus 26 aeYI~~~~~--~~~rVlEVG~G~g~~vA~~La~~~g---~~V~atDInp~Av~--------------------------- 73 (153)
T 2k4m_A 26 AVYIIRCSG--PGTRVVEVGAGRFLYVSDYIRKHSK---VDLVLTDIKPSHGG--------------------------- 73 (153)
T ss_dssp HHHHHHHSC--SSSEEEEETCTTCCHHHHHHHHHSC---CEEEEECSSCSSTT---------------------------
T ss_pred HHHHHhcCC--CCCcEEEEccCCChHHHHHHHHhCC---CeEEEEECCccccc---------------------------
Confidence 345544332 3579999999999 69999997 65 88999999974442
Q ss_pred EEECCccccCCCC-CCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEecCCc
Q 004178 598 LFDGSITVFDSRL-HGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPNYE 654 (770)
Q Consensus 598 f~~GDaedlp~~d-~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTPN~e 654 (770)
+++.|+.+..... ..||+|.++.--.-|. ..+. .+++-+.- -++|.+-..+
T Consensus 74 ~v~dDiF~P~~~~Y~~~DLIYsirPP~El~----~~i~-~lA~~v~a-dliI~pL~~E 125 (153)
T 2k4m_A 74 IVRDDITSPRMEIYRGAALIYSIRPPAEIH----SSLM-RVADAVGA-RLIIKPLTGE 125 (153)
T ss_dssp EECCCSSSCCHHHHTTEEEEEEESCCTTTH----HHHH-HHHHHHTC-EEEEECBTTB
T ss_pred eEEccCCCCcccccCCcCEEEEcCCCHHHH----HHHH-HHHHHcCC-CEEEEcCCCC
Confidence 5667776644322 4899998776544333 2222 23333322 5556555433
No 289
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.15 E-value=0.00046 Score=72.39 Aligned_cols=57 Identities=14% Similarity=0.198 Sum_probs=47.3
Q ss_pred HHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhh
Q 004178 518 QRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHS 578 (770)
Q Consensus 518 qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~ 578 (770)
..++.+++... .+++.|||++||+|..+..+++.+ .+++|+|+++.+++.|++++..
T Consensus 223 ~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g---~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 223 ELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWG---RRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp HHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcC---CeEEEEeCCHHHHHHHHHHHHH
Confidence 33445555544 468899999999999999999887 7999999999999999998854
No 290
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.11 E-value=0.00081 Score=73.85 Aligned_cols=114 Identities=10% Similarity=0.059 Sum_probs=75.5
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC--
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD-- 607 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp-- 607 (770)
.++++||=||-|.|..++.++++. + .+|+.|||++.+++.|++.+....... .+....++++++.+|+...-
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~-~-~~V~~VEIDp~VVe~ar~yfp~~~~~~----~d~pr~~rv~vii~Da~~fl~~ 277 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLK-P-KMVTMVEIDQMVIDGCKKYMRKTCGDV----LDNLKGDCYQVLIEDCIPVLKR 277 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTC-C-SEEEEEESCHHHHHHHHHHCCC----C----CSSSEETTEEEEESCHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhcC-C-ceeEEEccCHHHHHHHHhhchhhhhhh----hccccccceeeehHHHHHHHHh
Confidence 357899999999999999999875 3 799999999999999998653211110 00011246899999976532
Q ss_pred --CCCCCccEEEecccc-------ccCCh-hHHHHHHHHHHHcccCCEEEEE
Q 004178 608 --SRLHGFDIGTCLEVI-------EHMEE-DEASQFGNIVLSSFRPRILIVS 649 (770)
Q Consensus 608 --~~d~sFDlVVc~eVL-------EHL~~-d~~~~fleeI~rvLKPG~LIIS 649 (770)
.....||+|+.--.= ..... .-...|.+.+.+.|+||.++++
T Consensus 278 ~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~ 329 (381)
T 3c6k_A 278 YAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT 329 (381)
T ss_dssp HHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred hhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEE
Confidence 234679999864211 11110 1124566678999999955553
No 291
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.98 E-value=0.0018 Score=70.55 Aligned_cols=123 Identities=15% Similarity=0.134 Sum_probs=85.7
Q ss_pred HHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECC
Q 004178 523 ALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGS 602 (770)
Q Consensus 523 Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GD 602 (770)
....+...++.+|||+.+|.|.=+..|+... ....|+++|+++.-++..++++++.... ......++.+...|
T Consensus 140 ~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~-~~~~l~A~D~~~~R~~~l~~~l~r~~~~------~~~~~~~v~v~~~D 212 (359)
T 4fzv_A 140 PVLALGLQPGDIVLDLCAAPGGKTLALLQTG-CCRNLAANDLSPSRIARLQKILHSYVPE------EIRDGNQVRVTSWD 212 (359)
T ss_dssp HHHHHCCCTTEEEEESSCTTCHHHHHHHHTT-CEEEEEEECSCHHHHHHHHHHHHHHSCT------TTTTSSSEEEECCC
T ss_pred HHHHhCCCCCCEEEEecCCccHHHHHHHHhc-CCCcEEEEcCCHHHHHHHHHHHHHhhhh------hhccCCceEEEeCc
Confidence 3455677789999999999999998888876 3468999999999999888887643210 01123578899999
Q ss_pred ccccCC-CCCCccEEEe----cc----cccc-------CChh-------HHHHHHHHHHHcccCC-EEEEEecC
Q 004178 603 ITVFDS-RLHGFDIGTC----LE----VIEH-------MEED-------EASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 603 aedlp~-~d~sFDlVVc----~e----VLEH-------L~~d-------~~~~fleeI~rvLKPG-~LIISTPN 652 (770)
...++. ..+.||.|++ ++ ++.. ...+ ....++....++|||| .++-+|..
T Consensus 213 ~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCS 286 (359)
T 4fzv_A 213 GRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCS 286 (359)
T ss_dssp GGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred hhhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCC
Confidence 877643 3468999995 33 2211 1111 1235666788999999 66666665
No 292
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.72 E-value=0.0024 Score=67.45 Aligned_cols=118 Identities=9% Similarity=-0.009 Sum_probs=75.3
Q ss_pred HHHHHHHHHHh----hcCCCCEEEEEcCccchHHHHHhcCC----CCCceEEEEeCChH---------------------
Q 004178 517 KQRVEYALQHI----KESCATTLVDFGCGSGSLLDSLLDYP----TALEKIVGVDISQK--------------------- 567 (770)
Q Consensus 517 ~qR~e~Il~~L----~~~~~~rVLDIGCGtG~ll~~LAk~g----gp~~~VvGVDISee--------------------- 567 (770)
.+|...+...+ ....+.+|||+|+..|..+..++... .+..+|+++|..+.
T Consensus 88 ~~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~ 167 (282)
T 2wk1_A 88 IKRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRN 167 (282)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGH
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCccccccccccccccccccc
Confidence 45555544433 23458899999999999888776431 12478999996421
Q ss_pred -----HHHHHHHHHhhhhhcccccCCCCCC-CccEEEEECCccc-cCC-CCCCccEEEeccccccCChhHHHHHHHHHHH
Q 004178 568 -----SLSRAAKIIHSKLSKKLDAAVPCTD-VKSAVLFDGSITV-FDS-RLHGFDIGTCLEVIEHMEEDEASQFGNIVLS 639 (770)
Q Consensus 568 -----mLe~ArkrL~~~~s~~~~~l~pr~~-~~~Vef~~GDaed-lp~-~d~sFDlVVc~eVLEHL~~d~~~~fleeI~r 639 (770)
.++.+++++.+. +. ..+|+++.|++.+ ++. ....||+|..-.-. . +.....++.+..
T Consensus 168 ~~~~~~~~~ar~n~~~~-----------gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~---y-~~~~~~Le~~~p 232 (282)
T 2wk1_A 168 SVLAVSEEEVRRNFRNY-----------DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL---Y-ESTWDTLTNLYP 232 (282)
T ss_dssp HHHCCCHHHHHHHHHHT-----------TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS---H-HHHHHHHHHHGG
T ss_pred ccchhHHHHHHHHHHHc-----------CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc---c-ccHHHHHHHHHh
Confidence 356677766431 12 2689999999866 332 24689999654321 1 122344567899
Q ss_pred cccCCEEEEE
Q 004178 640 SFRPRILIVS 649 (770)
Q Consensus 640 vLKPG~LIIS 649 (770)
.|+||.+|+.
T Consensus 233 ~L~pGGiIv~ 242 (282)
T 2wk1_A 233 KVSVGGYVIV 242 (282)
T ss_dssp GEEEEEEEEE
T ss_pred hcCCCEEEEE
Confidence 9999955543
No 293
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.71 E-value=0.0091 Score=61.99 Aligned_cols=123 Identities=10% Similarity=0.120 Sum_probs=76.9
Q ss_pred cCCchHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCC
Q 004178 510 LFSPPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVP 589 (770)
Q Consensus 510 ~F~PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~p 589 (770)
.-+.+-....+..+.+.....++.+|||+||+.|.++.+.+... ...+|+|+|+-..--+ .+. +..
T Consensus 57 g~yrSRa~~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~-g~~~V~avdvG~~ghe------~P~-------~~~ 122 (267)
T 3p8z_A 57 HHAVSRGSAKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLK-KVTEVRGYTKGGPGHE------EPV-------PMS 122 (267)
T ss_dssp SCCSSTHHHHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTST-TEEEEEEECCCSTTSC------CCC-------CCC
T ss_pred CCccchHHHHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhc-CCCEEEEEecCCCCcc------Ccc-------hhh
Confidence 34445455556666665555677899999999999999887765 3468999998753221 000 001
Q ss_pred CCCCccEEEEEC-CccccCCCCCCccEEEeccccccCCh--hH--HHHHHHHHHHcccCCEEEE
Q 004178 590 CTDVKSAVLFDG-SITVFDSRLHGFDIGTCLEVIEHMEE--DE--ASQFGNIVLSSFRPRILIV 648 (770)
Q Consensus 590 r~~~~~Vef~~G-Daedlp~~d~sFDlVVc~eVLEHL~~--d~--~~~fleeI~rvLKPG~LII 648 (770)
..+-..|+|.++ |+..++. ..+|.|+|--.=-.-.+ |. --..++.+.++|++|-+++
T Consensus 123 s~gwn~v~fk~gvDv~~~~~--~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~~~fc~ 184 (267)
T 3p8z_A 123 TYGWNIVKLMSGKDVFYLPP--EKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKNNQFCI 184 (267)
T ss_dssp CTTTTSEEEECSCCGGGCCC--CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSSCEEEE
T ss_pred hcCcCceEEEeccceeecCC--ccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhcccCCEEE
Confidence 224457999999 9877765 56999999533211110 11 1124455678899884443
No 294
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.60 E-value=0.0015 Score=70.74 Aligned_cols=82 Identities=13% Similarity=0.153 Sum_probs=65.0
Q ss_pred HHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 521 EYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 521 e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
+.+++.+...++..+||..||.|..+..|++..++..+|+|+|.++++++.|+ ++ ...++++++
T Consensus 47 ~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL---------------~~~Rv~lv~ 110 (347)
T 3tka_A 47 DEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI---------------DDPRFSIIH 110 (347)
T ss_dssp HHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC---------------CCTTEEEEE
T ss_pred HHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh---------------cCCcEEEEe
Confidence 45667777778899999999999999999988657789999999999999884 33 124799999
Q ss_pred CCccccCC---C---CCCccEEEe
Q 004178 601 GSITVFDS---R---LHGFDIGTC 618 (770)
Q Consensus 601 GDaedlp~---~---d~sFDlVVc 618 (770)
++..++.. . .+.+|.|+.
T Consensus 111 ~nF~~l~~~L~~~g~~~~vDgILf 134 (347)
T 3tka_A 111 GPFSALGEYVAERDLIGKIDGILL 134 (347)
T ss_dssp SCGGGHHHHHHHTTCTTCEEEEEE
T ss_pred CCHHHHHHHHHhcCCCCcccEEEE
Confidence 99877532 1 125888886
No 295
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.40 E-value=0.012 Score=62.82 Aligned_cols=124 Identities=13% Similarity=0.125 Sum_probs=77.1
Q ss_pred cCCchHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCC
Q 004178 510 LFSPPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVP 589 (770)
Q Consensus 510 ~F~PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~p 589 (770)
..+.+-....+..+.+.....++.+|||+||++|.++.+.+... ...+|+|+|+-..--+ .+.+ ..
T Consensus 73 g~y~SR~~~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~-gv~~V~avdvG~~~he------~P~~-------~~ 138 (321)
T 3lkz_A 73 GHPVSRGTAKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQK-RVQEVRGYTKGGPGHE------EPQL-------VQ 138 (321)
T ss_dssp CCCSSTHHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCT-TEEEEEEECCCSTTSC------CCCC-------CC
T ss_pred CCccchHHHHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhc-CCCEEEEEEcCCCCcc------Ccch-------hh
Confidence 34555555566666666555677899999999999999887765 2468999998753110 0000 00
Q ss_pred CCCCccEEEEEC-CccccCCCCCCccEEEeccccccCChhHH-----HHHHHHHHHcccCC--EEEEEe
Q 004178 590 CTDVKSAVLFDG-SITVFDSRLHGFDIGTCLEVIEHMEEDEA-----SQFGNIVLSSFRPR--ILIVST 650 (770)
Q Consensus 590 r~~~~~Vef~~G-Daedlp~~d~sFDlVVc~eVLEHL~~d~~-----~~fleeI~rvLKPG--~LIIST 650 (770)
.-+..-|.|..+ |+..++. ..+|+|+|--. +--+.... -..++.+.++|++| -++|-.
T Consensus 139 ql~w~lV~~~~~~Dv~~l~~--~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KV 204 (321)
T 3lkz_A 139 SYGWNIVTMKSGVDVFYRPS--ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKV 204 (321)
T ss_dssp BTTGGGEEEECSCCTTSSCC--CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred hcCCcceEEEeccCHhhCCC--CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEE
Confidence 112234889988 8877776 56999999655 44332111 12444456788776 444433
No 296
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.38 E-value=0.0035 Score=66.69 Aligned_cols=124 Identities=11% Similarity=0.036 Sum_probs=69.2
Q ss_pred CCchHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCC
Q 004178 511 FSPPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPC 590 (770)
Q Consensus 511 F~PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr 590 (770)
.|.+-..-.+..+.+.--..++.+|||+||+.|.++..+++.. +...|+|+|+...+..... .. .
T Consensus 61 ~yrSRaa~KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~-gv~sV~Gvdlg~~~~~~P~------~~--------~ 125 (300)
T 3eld_A 61 ISVSRGAAKIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQK-EVMSVKGYTLGIEGHEKPI------HM--------Q 125 (300)
T ss_dssp CCSSTTHHHHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCC------CC--------C
T ss_pred CccchHHHHHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhc-CCceeeeEEeccccccccc------cc--------c
Confidence 3444333344444444223467899999999999999999864 3468999999764311000 00 0
Q ss_pred CCCccEEEEECCccccCCCCCCccEEEeccccccCCh---hH--HHHHHHHHHHcccCC-EEEEEe
Q 004178 591 TDVKSAVLFDGSITVFDSRLHGFDIGTCLEVIEHMEE---DE--ASQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 591 ~~~~~Vef~~GDaedlp~~d~sFDlVVc~eVLEHL~~---d~--~~~fleeI~rvLKPG-~LIIST 650 (770)
....++.....++.........+|+|+|-.... -.. |. ...+++-+..+|+|| .-++.-
T Consensus 126 ~~~~~iv~~~~~~di~~l~~~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 126 TLGWNIVKFKDKSNVFTMPTEPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp BTTGGGEEEECSCCTTTSCCCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred ccCCceEEeecCceeeecCCCCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 001123333333332333457899999965554 221 11 123355667899998 555543
No 297
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.28 E-value=0.012 Score=67.06 Aligned_cols=128 Identities=14% Similarity=0.198 Sum_probs=81.1
Q ss_pred CCchHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcC----CCC--------CceEEEEeCChHHHHHHHHHHhh
Q 004178 511 FSPPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDY----PTA--------LEKIVGVDISQKSLSRAAKIIHS 578 (770)
Q Consensus 511 F~PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~----ggp--------~~~VvGVDISeemLe~ArkrL~~ 578 (770)
|+.|-.- .+++++.+.+..+.+|+|-.||+|.++....++ ... ...++|+|+++.+...|+-++-
T Consensus 199 fyTP~~V--v~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~- 275 (530)
T 3ufb_A 199 FYTPRPV--VRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLL- 275 (530)
T ss_dssp CCCCHHH--HHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHH-
T ss_pred ECCcHHH--HHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHH-
Confidence 4444333 346677788888889999999999998765432 110 1469999999999999987652
Q ss_pred hhhcccccCCCCCCCccEEEEECCccccCC----CCCCccEEEecccc---------ccCC-----hhHHHHHHHHHHHc
Q 004178 579 KLSKKLDAAVPCTDVKSAVLFDGSITVFDS----RLHGFDIGTCLEVI---------EHME-----EDEASQFGNIVLSS 640 (770)
Q Consensus 579 ~~s~~~~~l~pr~~~~~Vef~~GDaedlp~----~d~sFDlVVc~eVL---------EHL~-----~d~~~~fleeI~rv 640 (770)
+ .+.....+..+|....+. ....||+|+++=-+ ..++ .+..-.|+..+.+.
T Consensus 276 -l----------hg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~ 344 (530)
T 3ufb_A 276 -L----------HGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRK 344 (530)
T ss_dssp -H----------HTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHH
T ss_pred -h----------cCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHH
Confidence 1 122334566777554332 23579999995222 1111 11223566678888
Q ss_pred cc-------CC-EEEEEecC
Q 004178 641 FR-------PR-ILIVSTPN 652 (770)
Q Consensus 641 LK-------PG-~LIISTPN 652 (770)
|| || .+.+.+|+
T Consensus 345 Lk~~~~~l~~gGr~avVlP~ 364 (530)
T 3ufb_A 345 LKRPGHGSDNGGRAAVVVPN 364 (530)
T ss_dssp BCCTTSSSSSCCEEEEEEEH
T ss_pred hhhhhhccCCCceEEEEecc
Confidence 87 45 77777776
No 298
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.08 E-value=0.0081 Score=61.71 Aligned_cols=55 Identities=15% Similarity=0.218 Sum_probs=45.6
Q ss_pred HHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHh
Q 004178 519 RVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIH 577 (770)
Q Consensus 519 R~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~ 577 (770)
.++.+++... .+++.|||..||+|..+...++.+ .+++|+|+++.+++.|++++.
T Consensus 201 l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~g---r~~ig~e~~~~~~~~~~~r~~ 255 (260)
T 1g60_A 201 LIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKLG---RNFIGCDMNAEYVNQANFVLN 255 (260)
T ss_dssp HHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcC---CeEEEEeCCHHHHHHHHHHHH
Confidence 3344444443 467899999999999999988887 799999999999999999874
No 299
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=95.75 E-value=0.023 Score=59.60 Aligned_cols=124 Identities=10% Similarity=0.044 Sum_probs=70.7
Q ss_pred CCchHHHHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCC
Q 004178 511 FSPPLSKQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPC 590 (770)
Q Consensus 511 F~PPL~~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr 590 (770)
-|+.-..-.+.+|.+..-..++.+|||+||+.|.++.+.++.. ....|.|.++..+. . +.+ ..|.
T Consensus 53 ~yRSRAayKL~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~-~vg~V~G~vig~D~-~-----~~P--------~~~~ 117 (269)
T 2px2_A 53 HPVSRGTAKLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMK-NVQEVRGYTKGGPG-H-----EEP--------MLMQ 117 (269)
T ss_dssp CCSSTHHHHHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTST-TEEEEEEECCCSTT-S-----CCC--------CCCC
T ss_pred CcccHHHHHHHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhc-CCCCceeEEEcccc-c-----cCC--------Cccc
Confidence 4455555556666655444568899999999999999998872 12455666655431 0 000 0011
Q ss_pred -CCCccEEEEEC-CccccCCCCCCccEEEeccccccCC---hhHHH--HHHHHHHHcccCCE--EEEEecC
Q 004178 591 -TDVKSAVLFDG-SITVFDSRLHGFDIGTCLEVIEHME---EDEAS--QFGNIVLSSFRPRI--LIVSTPN 652 (770)
Q Consensus 591 -~~~~~Vef~~G-Daedlp~~d~sFDlVVc~eVLEHL~---~d~~~--~fleeI~rvLKPG~--LIISTPN 652 (770)
.+..-+.|.++ |+.+++ ...+|+|+|-..-. -. -|... ..++-+.++|+||. +++=.-.
T Consensus 118 ~~Gv~~i~~~~G~Df~~~~--~~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 118 SYGWNIVTMKSGVDVFYKP--SEISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp STTGGGEEEECSCCGGGSC--CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCCceEEEeeccCCccCCC--CCCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 12222466668 998754 35799999955432 11 01111 12344558999973 5554433
No 300
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=95.24 E-value=0.029 Score=60.99 Aligned_cols=61 Identities=5% Similarity=-0.054 Sum_probs=48.6
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
++..|||||.|.|.++..|++.. ...+|+++|+++.++...++.+ ...+++++.+|+..++
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~-~~~~vvavE~D~~l~~~L~~~~---------------~~~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKY-CPRQYSLLEKRSSLYKFLNAKF---------------EGSPLQILKRDPYDWS 118 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHH-CCSEEEEECCCHHHHHHHHHHT---------------TTSSCEEECSCTTCHH
T ss_pred CCCEEEEECCCCCHHHHHHHhhC-CCCEEEEEecCHHHHHHHHHhc---------------cCCCEEEEECCccchh
Confidence 35899999999999999999752 1168999999999998877643 1247999999986543
No 301
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.20 E-value=0.091 Score=56.48 Aligned_cols=128 Identities=16% Similarity=0.108 Sum_probs=83.7
Q ss_pred HHHHHHHHH----hhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhc---cccc-CCC
Q 004178 518 QRVEYALQH----IKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSK---KLDA-AVP 589 (770)
Q Consensus 518 qR~e~Il~~----L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~---~~~~-l~p 589 (770)
.|..++-+. +...+...|+.+|||.......|.... +..+++-||. ++.++.-++.+...... .+.. ..+
T Consensus 80 ~Rt~~iD~~v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~-~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~ 157 (334)
T 1rjd_A 80 LRTVGIDAAILEFLVANEKVQVVNLGCGSDLRMLPLLQMF-PHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDT 157 (334)
T ss_dssp HHHHHHHHHHHHHHHHCSSEEEEEETCTTCCTHHHHHHHC-TTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCC
T ss_pred HHHHHHHHHHHHHHHHCCCcEEEEeCCCCccHHHHhcCcC-CCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccc
Confidence 355554333 333456899999999999988887643 2378888887 88888877766532100 0000 000
Q ss_pred CC-----CCccEEEEECCccccCC---------CCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEE
Q 004178 590 CT-----DVKSAVLFDGSITVFDS---------RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILI 647 (770)
Q Consensus 590 r~-----~~~~Vef~~GDaedlp~---------~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LI 647 (770)
.. ...+..++.+|+.+.+. ......++++-.++.+++++....+++.+.+.+..|.++
T Consensus 158 ~~~~~~~~~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~~~~~~v 229 (334)
T 1rjd_A 158 AKSPFLIDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKFSHGLWI 229 (334)
T ss_dssp CCTTEEEECSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSSEEEE
T ss_pred cccccccCCCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhCCCcEEE
Confidence 00 12578899999876421 124568899999999999999999998888877544443
No 302
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=95.11 E-value=0.036 Score=50.84 Aligned_cols=107 Identities=19% Similarity=0.229 Sum_probs=80.0
Q ss_pred CCCceeeeec-CCCCCCccCCCCceeEEEEEEEEEecccccccceec------ccceeeeccCCcccccceeeeeecccc
Q 004178 381 PEHGIYCLSI-GGPDSGIYPSNGCLSFISYSVSLVIEGETMKELLES------REEFEFEMGTGAVIPQVEVVTAQMSVG 453 (770)
Q Consensus 381 ~~~~~~~~~~-~~~~~~~~~~~g~~~~i~y~~~l~~~~~~~~~l~e~------~~ef~fe~g~~~~~~~~~~~~~~~sv~ 453 (770)
....+....| +|.+.|-.|..|+.+.|.|+..+.-+| .++++ ...|.|.+|.+.+.+-++..+..|.+|
T Consensus 10 ~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG----~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~G 85 (125)
T 4dip_A 10 PEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDG----SLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKGMCVG 85 (125)
T ss_dssp CCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTC----CEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTTCCTT
T ss_pred CCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCC----cEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhCCCCC
Confidence 3455555555 577789999999999999999987444 24442 266999999999999999999999999
Q ss_pred ccceecccCCchhhhhhccCCccchhhcccccccccceeeeecccCC
Q 004178 454 QSACFCKELPPQELILAAADDSARTFSLLSSRACCLEYHITLLRVTE 500 (770)
Q Consensus 454 q~~~~~~~l~p~elflaa~~~~~~diS~Ls~~~~~Ley~i~lL~v~e 500 (770)
....|. +||...+-..... .++..+. |.|.+.++.+..
T Consensus 86 e~~~~~--ip~~~aYG~~g~~------~Ip~~~~-l~f~vel~~i~~ 123 (125)
T 4dip_A 86 EKRKLI--IPPALGYGKEGKG------KIPPEST-LIFNIDLLEIRN 123 (125)
T ss_dssp CEEEEE--ECGGGTTTTTCBT------TBCTTCC-EEEEEEEEEEEC
T ss_pred CEEEEE--EChHHhcCCCCCC------CCCCCCe-EEEEEEEEEEEc
Confidence 999888 7777666544321 2334444 778888876554
No 303
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=94.48 E-value=1 Score=47.77 Aligned_cols=110 Identities=11% Similarity=-0.041 Sum_probs=80.0
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC--
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS-- 608 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~-- 608 (770)
....||++|||-=.....+.. . ...+|+=|| .+..++..++.+.... .....+..++.+|+.+ ..
T Consensus 102 g~~QvV~LGaGlDTra~Rl~~-~-~~~~v~evD-~P~vi~~k~~lL~~~~---------~~~~~~~~~v~~Dl~d-~~~~ 168 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLDW-P-TGTTVYEID-QPKVLAYKSTTLAEHG---------VTPTADRREVPIDLRQ-DWPP 168 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSCC-C-TTCEEEEEE-CHHHHHHHHHHHHHTT---------CCCSSEEEEEECCTTS-CHHH
T ss_pred CCCeEEEeCCCCCchhhhccC-C-CCcEEEEcC-CHHHHHHHHHHHHhcC---------CCCCCCeEEEecchHh-hHHH
Confidence 457899999998777776653 1 237899999 6999999888774311 1123568889999876 21
Q ss_pred -------CCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 609 -------RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 609 -------~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
....-=++++-++++|++++....+++.+...+.|| .+++...+.
T Consensus 169 ~l~~~g~d~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 169 ALRSAGFDPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp HHHHTTCCTTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred HHHhccCCCCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 112234778889999999888888888888888899 777766554
No 304
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=94.39 E-value=0.026 Score=49.78 Aligned_cols=92 Identities=22% Similarity=0.339 Sum_probs=66.6
Q ss_pred CccCCCCceeEEEEEEEEEecccccccceec----ccceeeeccCCcccccceeeeeeccccccceecccCCchhhhhhc
Q 004178 396 GIYPSNGCLSFISYSVSLVIEGETMKELLES----REEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELILAA 471 (770)
Q Consensus 396 ~~~~~~g~~~~i~y~~~l~~~~~~~~~l~e~----~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elflaa 471 (770)
|-.|..|+.+.|.|+..+ .+|+ ++++ ...|+|.+|.+.+.+-++..+..|.+|+...|. +||...+-..
T Consensus 3 g~~~~~gd~V~v~y~~~~-~dG~----~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~--ip~~~ayG~~ 75 (102)
T 2pbc_A 3 PIKSRKGDVLHMHYTGKL-EDGT----EFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLV--IPSELGYGER 75 (102)
T ss_dssp CCCCCTTCEEEEEEEEEC-TTSC----EEEESTTTTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEE--ECGGGTTTTT
T ss_pred CCcCCCCCEEEEEEEEEE-CCCC----EEEeCCCCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEE--ECHHHCcCCC
Confidence 445899999999999987 3443 4553 468999999999999999999999999999986 7776655433
Q ss_pred cCCccchhhcccccccccceeeeecccCC
Q 004178 472 ADDSARTFSLLSSRACCLEYHITLLRVTE 500 (770)
Q Consensus 472 ~~~~~~diS~Ls~~~~~Ley~i~lL~v~e 500 (770)
.... .++..+- +.|.++++.+..
T Consensus 76 ~~~~-----~Ip~~~~-l~f~v~l~~v~~ 98 (102)
T 2pbc_A 76 GAPP-----KIPGGAT-LVFEVELLKIER 98 (102)
T ss_dssp CBTT-----TBCTTCC-EEEEEEEEEEGG
T ss_pred CCCC-----CcCcCCe-EEEEEEEEEecc
Confidence 2110 1222333 778888876544
No 305
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=94.35 E-value=0.034 Score=51.29 Aligned_cols=98 Identities=18% Similarity=0.264 Sum_probs=71.5
Q ss_pred CC-CCCCccCCCCceeEEEEEEEEEecccccccceec----ccceeeeccCCcccccceeeeeeccccccceecccCCch
Q 004178 391 GG-PDSGIYPSNGCLSFISYSVSLVIEGETMKELLES----REEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQ 465 (770)
Q Consensus 391 ~~-~~~~~~~~~g~~~~i~y~~~l~~~~~~~~~l~e~----~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~ 465 (770)
+| ..+|-.|..|+.|.|.|+..+..+|+ ++++ ...|+|.+|.|.+.+-++..+..|.+|....|. +||.
T Consensus 25 ~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~----~fd~s~~~~~p~~f~lG~g~~i~g~e~~l~gm~~Ge~~~v~--ip~~ 98 (129)
T 2vn1_A 25 KGDEGEENIPKKGNEVTVHYVGKLESTGK----VFDSSFDRNVPFKFHLEQGEVIKGWDICVSSMRKNEKCLVR--IESM 98 (129)
T ss_dssp CCCCSGGGSCCTTCEEEEEEEEEETTTCC----EEEEGGGTTCCEEEETTSSSSCHHHHHHHTTCCTTCEEEEE--ECGG
T ss_pred CCCCCCCCcCCCCCEEEEEEEEEECCCCe----EEEecCCCCccEEEEeCCCCcCHHHHHHHhCCCCCCEEEEE--EChH
Confidence 57 55789999999999999999833442 4442 367999999999999999999999999999987 7776
Q ss_pred hhhhhccCCccchhhcccccccccceeeeecccCC
Q 004178 466 ELILAAADDSARTFSLLSSRACCLEYHITLLRVTE 500 (770)
Q Consensus 466 elflaa~~~~~~diS~Ls~~~~~Ley~i~lL~v~e 500 (770)
..+-..... ..++..+- +.|.+.++.+..
T Consensus 99 ~aYG~~~~~-----~~Ip~~~~-l~f~vel~~v~~ 127 (129)
T 2vn1_A 99 YGYGDEGCG-----ESIPGNSV-LLFEIELLSFRE 127 (129)
T ss_dssp GTTTTTCBT-----TTBCTTCC-EEEEEEEEEEEC
T ss_pred HcCCCCCCC-----CCcCCCCe-EEEEEEEEEEec
Confidence 655433211 01233333 777787776543
No 306
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=93.81 E-value=0.091 Score=56.39 Aligned_cols=71 Identities=11% Similarity=0.120 Sum_probs=53.7
Q ss_pred CCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCCC-
Q 004178 532 ATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSRL- 610 (770)
Q Consensus 532 ~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~d- 610 (770)
..+|+|+-||.|.+...+.+.+.....|+++|+++.+++..+.+. ++..++.+|+.++....
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~-----------------~~~~~~~~Di~~~~~~~~ 64 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNF-----------------PHTQLLAKTIEGITLEEF 64 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC-----------------TTSCEECSCGGGCCHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhc-----------------cccccccCCHHHccHhHc
Confidence 358999999999999988876522357999999999999988764 13346788988765321
Q ss_pred --CCccEEEec
Q 004178 611 --HGFDIGTCL 619 (770)
Q Consensus 611 --~sFDlVVc~ 619 (770)
..+|+|+..
T Consensus 65 ~~~~~D~l~~g 75 (343)
T 1g55_A 65 DRLSFDMILMS 75 (343)
T ss_dssp HHHCCSEEEEC
T ss_pred CcCCcCEEEEc
Confidence 268999874
No 307
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.32 E-value=0.1 Score=48.71 Aligned_cols=103 Identities=21% Similarity=0.329 Sum_probs=72.8
Q ss_pred eecCCCCCCccCCCCceeEEEEEEEEEecccccccceecccceeeeccCCcccccceeeeeeccccccceecccCCchhh
Q 004178 388 LSIGGPDSGIYPSNGCLSFISYSVSLVIEGETMKELLESREEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQEL 467 (770)
Q Consensus 388 ~~~~~~~~~~~~~~g~~~~i~y~~~l~~~~~~~~~l~e~~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~el 467 (770)
.-.+|......|..|..|.|.|+..+. +| .++++...|+|.+|.+.+.+-++..+..|.+|....|. +||...
T Consensus 23 vl~~G~G~~~~~~~gd~V~v~Y~g~~~-dG----~~fds~~p~~f~lG~g~~i~G~e~~L~gm~~Ge~~~v~--ip~~~a 95 (135)
T 2d9f_A 23 TLVPGPPGSSRPVKGQVVTVHLQTSLE-NG----TRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVT--ADSKYC 95 (135)
T ss_dssp EEECCCSSCCCCCTTSEEEEEEEEEES-SS----CEEEEEEEEEEETTSCCSCTTTTTTGGGSCTTCEEEEE--ECHHHH
T ss_pred EEEcCCCCCccCCCCCEEEEEEEEEEC-CC----CEEecCCCEEEEeCCCChhHHHHHHHhCCCCCCEEEEE--EChhHc
Confidence 334564333489999999999999873 44 25667889999999999999999999999999999887 676655
Q ss_pred hhhccCCccchhhcccccccccceeeeecccCCCh
Q 004178 468 ILAAADDSARTFSLLSSRACCLEYHITLLRVTEPP 502 (770)
Q Consensus 468 flaa~~~~~~diS~Ls~~~~~Ley~i~lL~v~ep~ 502 (770)
+-...... . .++...- +.|.+.++.+....
T Consensus 96 YG~~~~~~-~---~Ip~~~~-l~f~vel~~v~~~~ 125 (135)
T 2d9f_A 96 YGPQGSRS-P---YIPPHAA-LCLEVTLKTAVDRP 125 (135)
T ss_dssp TCTTCCSS-S---CCCTTCC-EEEEEEEEEEESSC
T ss_pred cCcCCcCC-C---ccCCCCe-EEEEEEEEEeecCC
Confidence 43222010 0 1222333 78888888765543
No 308
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=93.30 E-value=0.089 Score=46.62 Aligned_cols=90 Identities=30% Similarity=0.460 Sum_probs=64.4
Q ss_pred CCcc-CCCCceeEEEEEEEEEecccccccceecc----cceeeeccCCcccccceeeeeeccccccceecccCCchhhhh
Q 004178 395 SGIY-PSNGCLSFISYSVSLVIEGETMKELLESR----EEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELIL 469 (770)
Q Consensus 395 ~~~~-~~~g~~~~i~y~~~l~~~~~~~~~l~e~~----~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elfl 469 (770)
+|-. |..|+.+.|.|+..+. +|+ ++++. +.|+|.+|.+.+.+-++..+..|.+|....|. +||...+-
T Consensus 11 ~g~~~~~~gd~V~v~y~~~~~-dG~----~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~~~--ip~~~ayG 83 (107)
T 2ppn_A 11 DGRTFPKRGQTCVVHYTGMLE-DGK----KFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLT--ISPDYAYG 83 (107)
T ss_dssp CSSCCCCTTCEEEEEEEEEET-TSC----EEEEHHHHTSCEEEETTSCCSCHHHHHHHTTCCTTCEEEEE--ECGGGTTT
T ss_pred CCCcCCCCCCEEEEEEEEEEC-CCC----EEEecCCCCCCEEEEeCCCChHHHHHHHHhCCCCCCEEEEE--ECHHHccC
Confidence 4555 9999999999999975 443 45532 68999999999999999999999999999987 67765544
Q ss_pred hccCCccchhhcccccccccceeeeecc
Q 004178 470 AAADDSARTFSLLSSRACCLEYHITLLR 497 (770)
Q Consensus 470 aa~~~~~~diS~Ls~~~~~Ley~i~lL~ 497 (770)
..... ..++..+- +.|.+.++.
T Consensus 84 ~~~~~-----~~Ip~~~~-l~f~v~l~~ 105 (107)
T 2ppn_A 84 ATGHP-----GIIPPHAT-LVFDVELLK 105 (107)
T ss_dssp TTCBT-----TTBCTTCC-EEEEEEEEE
T ss_pred CCCCC-----CCcCCCCe-EEEEEEEEE
Confidence 32211 01222333 666666654
No 309
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=93.10 E-value=0.092 Score=47.65 Aligned_cols=97 Identities=21% Similarity=0.315 Sum_probs=68.6
Q ss_pred ecCCCCCCccCCCCceeEEEEEEEEEecccccccceecccceeeeccCCcccccceeeeeeccccccceecccCCchhhh
Q 004178 389 SIGGPDSGIYPSNGCLSFISYSVSLVIEGETMKELLESREEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELI 468 (770)
Q Consensus 389 ~~~~~~~~~~~~~g~~~~i~y~~~l~~~~~~~~~l~e~~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elf 468 (770)
-.+|......|..|+.+.|.|+..+ .+| ..+++...|+|.+|.+.+.+-++..+..|.+|....|. +||...+
T Consensus 20 l~~G~G~~~~~~~gd~V~v~y~g~~-~dG----~~~ds~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~~~--ip~~~ay 92 (118)
T 2awg_A 20 LVPGPPGSSRPVKGQVVTVHLQTSL-ENG----TRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVT--ADSKYCY 92 (118)
T ss_dssp EECCCTTCCCCCTTSEEEEEEEEEC-TTS----CEEEEEEEEEEETTSSCSCHHHHHHGGGSCTTCEEEEE--ECGGGTT
T ss_pred EEcCCCCCccCCCCCEEEEEEEEEE-CCC----CEEECCCCEEEEECCCChhHHHHHHHhCCCCCCEEEEE--EChHHcc
Confidence 3455433347999999999999987 344 35667789999999999999999999999999999986 6776554
Q ss_pred hhccCCccchhhcccccccccceeeeeccc
Q 004178 469 LAAADDSARTFSLLSSRACCLEYHITLLRV 498 (770)
Q Consensus 469 laa~~~~~~diS~Ls~~~~~Ley~i~lL~v 498 (770)
-..... ..++..+. +.|.+.++.+
T Consensus 93 G~~~~~-----~~Ip~~~~-l~f~v~l~~v 116 (118)
T 2awg_A 93 GPQGRS-----PYIPPHAA-LCLEVTLKTA 116 (118)
T ss_dssp TTTCBT-----TTBCTTCC-EEEEEEEEEE
T ss_pred CCCCCC-----CccCCCCe-EEEEEEEEEe
Confidence 322211 01222333 6677776644
No 310
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=92.96 E-value=0.22 Score=53.38 Aligned_cols=107 Identities=10% Similarity=0.157 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHhhc-----CCCCEEEEEcC------ccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcc
Q 004178 515 LSKQRVEYALQHIKE-----SCATTLVDFGC------GSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKK 583 (770)
Q Consensus 515 L~~qR~e~Il~~L~~-----~~~~rVLDIGC------GtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~ 583 (770)
+.-..|..+.++++. ..+.+|||+|+ ..|... +.+..+....|+++|+.+-.
T Consensus 88 ~nv~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~V--Lr~~~p~g~~VVavDL~~~~--------------- 150 (344)
T 3r24_A 88 MNVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAV--LRQWLPTGTLLVDSDLNDFV--------------- 150 (344)
T ss_dssp HHHHHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHHH--HHHHSCTTCEEEEEESSCCB---------------
T ss_pred eeHHHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHHH--HHHhCCCCcEEEEeeCcccc---------------
Confidence 444555555565533 45789999996 667742 33333222599999987511
Q ss_pred cccCCCCCCCccEEEEECCccccCCCCCCccEEEeccc---cccCChh------HHHHHHHHHHHcccCC-EEEE
Q 004178 584 LDAAVPCTDVKSAVLFDGSITVFDSRLHGFDIGTCLEV---IEHMEED------EASQFGNIVLSSFRPR-ILIV 648 (770)
Q Consensus 584 ~~~l~pr~~~~~Vef~~GDaedlp~~d~sFDlVVc~eV---LEHL~~d------~~~~fleeI~rvLKPG-~LII 648 (770)
.... .+++||...... ...||+|++-.. -.+...+ -.+..++-+.+.|+|| .+++
T Consensus 151 --------sda~-~~IqGD~~~~~~-~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvV 215 (344)
T 3r24_A 151 --------SDAD-STLIGDCATVHT-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAV 215 (344)
T ss_dssp --------CSSS-EEEESCGGGEEE-SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEE
T ss_pred --------cCCC-eEEEcccccccc-CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEE
Confidence 1112 459999766544 378999998432 1222211 2344455567799998 5554
No 311
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=92.61 E-value=0.24 Score=46.26 Aligned_cols=90 Identities=24% Similarity=0.319 Sum_probs=65.7
Q ss_pred cccccccccCCCCceeeee-cCCCCCCccCCCCceeEEEEEEEEEecccccccceec----ccceeeeccCCccccccee
Q 004178 371 ANSINTLNAIPEHGIYCLS-IGGPDSGIYPSNGCLSFISYSVSLVIEGETMKELLES----REEFEFEMGTGAVIPQVEV 445 (770)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~i~y~~~l~~~~~~~~~l~e~----~~ef~fe~g~~~~~~~~~~ 445 (770)
.++--.........+.... .+| .|-.|..|..|.|.|+..+ .+|+ ++++ .+.|+|.+|.|.+.+-++.
T Consensus 16 ~~~~~~~~~~~~~gl~~~~l~~G--~G~~~~~gd~V~v~Y~g~~-~dG~----~fdss~~~~~p~~f~lG~g~vi~G~ee 88 (133)
T 2y78_A 16 PRGSHMTVVTTESGLKYEDLTEG--SGAEARAGQTVSVHYTGWL-TDGQ----KFDSSKDRNDPFAFVLGGGMVIKGWDE 88 (133)
T ss_dssp GGTTTTCCEECTTSCEEEEEECC--SSCBCCTTSEEEEEEEEEE-TTSC----EEEETTTTTCCEEEETTSSSSCHHHHH
T ss_pred ecccCCCcEECCCCEEEEEEEcC--CCCCCCCCCEEEEEEEEEE-CCCC----EEeccCcCCCCEEEEeCCCChhHHHHH
Confidence 3333344444444544433 345 4788999999999999987 3442 4443 3679999999999999999
Q ss_pred eeeeccccccceecccCCchhhhh
Q 004178 446 VTAQMSVGQSACFCKELPPQELIL 469 (770)
Q Consensus 446 ~~~~~sv~q~~~~~~~l~p~elfl 469 (770)
.+..|.+|....|. +||...+-
T Consensus 89 aL~gmk~Ge~~~v~--ip~~~aYG 110 (133)
T 2y78_A 89 GVQGMKVGGVRRLT--IPPQLGYG 110 (133)
T ss_dssp HSTTCBTTCEEEEE--ECGGGTTT
T ss_pred HHcCCCCCCEEEEE--ECcHHhCC
Confidence 99999999999988 77766554
No 312
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=92.54 E-value=0.14 Score=45.88 Aligned_cols=90 Identities=27% Similarity=0.434 Sum_probs=64.4
Q ss_pred CCcc-CCCCceeEEEEEEEEEecccccccceec----ccceeeeccCCcccccceeeeeeccccccceecccCCchhhhh
Q 004178 395 SGIY-PSNGCLSFISYSVSLVIEGETMKELLES----REEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELIL 469 (770)
Q Consensus 395 ~~~~-~~~g~~~~i~y~~~l~~~~~~~~~l~e~----~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elfl 469 (770)
+|-. |..|..+.|.|...+ .+|+ ++++ ...|+|.+|.+.+.+-++..+..|.+|....|. +||...+-
T Consensus 17 ~g~~~~~~gd~V~v~y~~~~-~dG~----~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~~v~--ip~~~ayG 89 (113)
T 1yat_A 17 DGATFPKTGDLVTIHYTGTL-ENGQ----KFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLT--IPGPYAYG 89 (113)
T ss_dssp CSSCCCCTTCEEEEEEEEEE-TTSC----EEEESTTTTCCEEEETTSSSSCHHHHHHGGGCCTTCEEEEE--ECGGGTTT
T ss_pred CCcccCCCCCEEEEEEEEEE-CCCC----EEEecCCCCCcEEEEeCCCCccHHHHHHHhCCCCCCEEEEE--ECHHHCcC
Confidence 4666 999999999999987 3442 4553 257999999999999999999999999999987 77765544
Q ss_pred hccCCccchhhcccccccccceeeeecc
Q 004178 470 AAADDSARTFSLLSSRACCLEYHITLLR 497 (770)
Q Consensus 470 aa~~~~~~diS~Ls~~~~~Ley~i~lL~ 497 (770)
...... .++..+- +.|.+.++.
T Consensus 90 ~~~~~~-----~Ip~~~~-l~f~vel~~ 111 (113)
T 1yat_A 90 PRGFPG-----LIPPNST-LVFDVELLK 111 (113)
T ss_dssp TTCBTT-----TBCTTCC-EEEEEEEEE
T ss_pred CCCCCC-----CcCCCCe-EEEEEEEEE
Confidence 322110 1223333 666666654
No 313
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=92.51 E-value=0.54 Score=51.22 Aligned_cols=68 Identities=13% Similarity=0.125 Sum_probs=53.3
Q ss_pred CEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC----
Q 004178 533 TTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS---- 608 (770)
Q Consensus 533 ~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~---- 608 (770)
.+++|+-||.|.+...+.+.+ ...|.++|+++.+++..+.++ ++..++.+|+.++..
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~-----------------~~~~~~~~DI~~~~~~~~~ 63 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINF-----------------PRSLHVQEDVSLLNAEIIK 63 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHC-----------------TTSEEECCCGGGCCHHHHH
T ss_pred CeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhC-----------------CCCceEecChhhcCHHHHH
Confidence 589999999999999888776 356789999999988887653 346778899887643
Q ss_pred ----CCCCccEEEec
Q 004178 609 ----RLHGFDIGTCL 619 (770)
Q Consensus 609 ----~d~sFDlVVc~ 619 (770)
....+|+|+..
T Consensus 64 ~~~~~~~~~D~i~gg 78 (376)
T 3g7u_A 64 GFFKNDMPIDGIIGG 78 (376)
T ss_dssp HHHCSCCCCCEEEEC
T ss_pred hhcccCCCeeEEEec
Confidence 23579999863
No 314
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=91.36 E-value=0.36 Score=46.59 Aligned_cols=101 Identities=21% Similarity=0.288 Sum_probs=71.6
Q ss_pred eeeecCCCCCCccCCCCceeEEEEEEEEEecccccccceecccceeeeccCCcccccceeeeeeccccccceecccCCch
Q 004178 386 YCLSIGGPDSGIYPSNGCLSFISYSVSLVIEGETMKELLESREEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQ 465 (770)
Q Consensus 386 ~~~~~~~~~~~~~~~~g~~~~i~y~~~l~~~~~~~~~l~e~~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~ 465 (770)
+..-.+|...+..|..|+.|.|.|...|. +| .++.+...|+|.+|.|.+++-++..+..|.+|....|. +||.
T Consensus 47 ~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~-dG----~~fds~~p~~f~lG~g~vi~G~eeaL~gMk~Ge~~~v~--IP~~ 119 (157)
T 2jwx_A 47 KKTLVPGPPGSSRPVKGQVVTVHLQTSLE-NG----TRVQEEPELVFTLGDCDVIQALDLSVPLMDVGETAMVT--ADSK 119 (157)
T ss_dssp EEEEECCSTTSCCCCTTEEEEEEEEEECT-TS----CEEEEEEEEEEETTTTSSCHHHHHHTTTSCTTCEEEEE--ECGG
T ss_pred EEEEEccCCCccCCCCCCEEEEEEEEEEC-CC----CEeecCCCEEEEeCCCChhHHHHHHHcCCCCCCEEEEE--ECch
Confidence 44445565444589999999999999873 44 35667889999999999999999999999999999887 6665
Q ss_pred hhhhhccCCccchhhcccccccccceeeeeccc
Q 004178 466 ELILAAADDSARTFSLLSSRACCLEYHITLLRV 498 (770)
Q Consensus 466 elflaa~~~~~~diS~Ls~~~~~Ley~i~lL~v 498 (770)
..+-...... . .++..+- +.|.+.++.+
T Consensus 120 ~aYG~~g~~~-~---~IPp~st-LiF~VeL~~i 147 (157)
T 2jwx_A 120 YCYGPQGSRS-P---YIPPHAA-LCLEVTLKTA 147 (157)
T ss_dssp GTTTTTCCSS-S---CCCTTCC-EEEEEEEEEE
T ss_pred hcCCcccccC-C---CcCCCCe-EEEEEEEEEE
Confidence 5443222010 0 1223333 7777777754
No 315
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=91.04 E-value=0.17 Score=46.57 Aligned_cols=91 Identities=27% Similarity=0.393 Sum_probs=67.3
Q ss_pred CCc-cCCCCceeEEEEEEEEEecccccccceec----ccceeeeccCCcccccceeeeeeccccccceecccCCchhhhh
Q 004178 395 SGI-YPSNGCLSFISYSVSLVIEGETMKELLES----REEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELIL 469 (770)
Q Consensus 395 ~~~-~~~~g~~~~i~y~~~l~~~~~~~~~l~e~----~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elfl 469 (770)
+|- .|..|+.+.|.|...+. +| .++.+ +..|.|.+|.|.+.+-++..+..|.+|....|. +||...+-
T Consensus 30 ~G~~~p~~gd~V~v~Y~g~~~-dG----~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~--ip~~~aYG 102 (128)
T 3o5q_A 30 NGEETPMIGDKVYVHYKGKLS-NG----KKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLL--CKPEYAYG 102 (128)
T ss_dssp SSSCCCCTTCEEEEEEEEEET-TS----CEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEE--ECGGGTTT
T ss_pred CCCccCCCCCEEEEEEEEEEC-CC----CEEEecCCCCCCEEEEECCCCccHHHHHHHhcCCCCCEEEEE--EChHHcCC
Confidence 354 79999999999999984 44 24443 356999999999999999999999999999987 78776665
Q ss_pred hccCCccchhhcccccccccceeeeeccc
Q 004178 470 AAADDSARTFSLLSSRACCLEYHITLLRV 498 (770)
Q Consensus 470 aa~~~~~~diS~Ls~~~~~Ley~i~lL~v 498 (770)
..... ..++..+. |.|.+.++.+
T Consensus 103 ~~g~~-----~~Ip~~~~-l~f~vel~~i 125 (128)
T 3o5q_A 103 SAGSL-----PKIPSNAT-LFFEIELLDF 125 (128)
T ss_dssp TTCBT-----TTBCTTCC-EEEEEEEEEE
T ss_pred CCCCC-----CCcCCCCE-EEEEEEEEEe
Confidence 44221 12333444 7777777654
No 316
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=90.89 E-value=0.21 Score=47.15 Aligned_cols=91 Identities=27% Similarity=0.393 Sum_probs=67.7
Q ss_pred CCc-cCCCCceeEEEEEEEEEecccccccceec----ccceeeeccCCcccccceeeeeeccccccceecccCCchhhhh
Q 004178 395 SGI-YPSNGCLSFISYSVSLVIEGETMKELLES----REEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELIL 469 (770)
Q Consensus 395 ~~~-~~~~g~~~~i~y~~~l~~~~~~~~~l~e~----~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elfl 469 (770)
.|- .|..|+.|.|.|...|. +| .++.+ +..|.|.+|.|.+.+-++..+..|.+|....|. +||...+-
T Consensus 46 ~G~~~p~~gd~V~v~Y~g~~~-dG----~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~gm~~Ge~~~v~--ipp~~aYG 118 (144)
T 3o5e_A 46 NGEETPMIGDKVYVHYKGKLS-NG----KKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLL--CKPEYAYG 118 (144)
T ss_dssp BSSCCCCTTCEEEEEEEEECT-TS----CEEEESGGGTSCEEEETTSSSSCHHHHHHHTTCCBTCEEEEE--ECGGGTTT
T ss_pred CCCccCCCCCEEEEEEEEEEC-CC----CEEEeecccCCCeEEEeCCCcccHHHHHHHhCCCCCCEEEEE--EChHHCcC
Confidence 354 79999999999999975 44 24443 345999999999999999999999999999987 78776665
Q ss_pred hccCCccchhhcccccccccceeeeeccc
Q 004178 470 AAADDSARTFSLLSSRACCLEYHITLLRV 498 (770)
Q Consensus 470 aa~~~~~~diS~Ls~~~~~Ley~i~lL~v 498 (770)
..... ..++..+. |.|.+.++.+
T Consensus 119 ~~g~~-----~~Ipp~~~-L~f~VeL~~i 141 (144)
T 3o5e_A 119 SAGSL-----PKIPSNAT-LFFEIELLDF 141 (144)
T ss_dssp TTCBT-----TTBCTTCC-EEEEEEEEEE
T ss_pred CCCCC-----CCcCCCCe-EEEEEEEEEe
Confidence 44321 12333444 7777777754
No 317
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=90.85 E-value=0.24 Score=46.05 Aligned_cols=68 Identities=28% Similarity=0.480 Sum_probs=55.2
Q ss_pred CCcc-CCCCceeEEEEEEEEEecccccccceecc----cceeeeccCCcccccceeeeeeccccccceecccCCchhhhh
Q 004178 395 SGIY-PSNGCLSFISYSVSLVIEGETMKELLESR----EEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELIL 469 (770)
Q Consensus 395 ~~~~-~~~g~~~~i~y~~~l~~~~~~~~~l~e~~----~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elfl 469 (770)
+|-. |..|..|.|.|+..+ .+|+ ++++. +.|+|.+|.+.+.+-++..+..|.+|....|. +||...+-
T Consensus 35 ~G~~~~~~gd~V~v~Y~g~~-~dG~----~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~--ip~~~aYG 107 (130)
T 2lgo_A 35 DGVTKPQAGKKVTVHYDGRF-PDGK----QFDSSRSRGKPFQFTLGAGEVIKGWDQGVATMTLGEKALFT--IPYQLAYG 107 (130)
T ss_dssp CSSCCCCTTSEEEEEEEEEC-TTSC----EEECTTTTTCCEEEETTSTTSCHHHHHHHHHSCTTEEEEEE--ECTTTSTT
T ss_pred CCCccCCCCCEEEEEEEEEE-CCCC----EEEccCcCCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEE--ECcHHHCC
Confidence 4665 999999999999986 2442 45532 57999999999999999999999999999887 67665544
No 318
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=90.70 E-value=0.17 Score=49.83 Aligned_cols=99 Identities=18% Similarity=0.222 Sum_probs=71.7
Q ss_pred CCccCCCCceeEEEEEEEEEecccccccceec----ccceeeeccCC-cccccceeeeeeccccccceecccCCchhhhh
Q 004178 395 SGIYPSNGCLSFISYSVSLVIEGETMKELLES----REEFEFEMGTG-AVIPQVEVVTAQMSVGQSACFCKELPPQELIL 469 (770)
Q Consensus 395 ~~~~~~~g~~~~i~y~~~l~~~~~~~~~l~e~----~~ef~fe~g~~-~~~~~~~~~~~~~sv~q~~~~~~~l~p~elfl 469 (770)
+|-.|..|+.|.|.|+..|.-+|+ ++.+ ...|.|.+|.| .+++-++..+..|.+|..+.|. +||...+-
T Consensus 60 ~G~~~~~Gd~V~v~Y~g~l~~dG~----~fdss~~~~~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~~~v~--iPp~~aYG 133 (180)
T 2f4e_A 60 HGSKPSKYSTCFLHYRAWTKNSQH----KFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVH--VGWELAYG 133 (180)
T ss_dssp BSCCBCTTCEEEEEEEEEETTTCC----EEEETTTTTCCEEEETTSCCGGGHHHHHHHTTCCBTCEEEEE--ECGGGTTT
T ss_pred CCCCCCCCCEEEEEEEEEECCCCc----EEeccCccCCCEEEEeCCCCchhHHHHHHHhCCCCCCEEEEE--ECchHhCC
Confidence 577999999999999998864443 3442 46799999999 8999999999999999999987 77765444
Q ss_pred hccCCccchhhcccccccccceeeeecccCCChh
Q 004178 470 AAADDSARTFSLLSSRACCLEYHITLLRVTEPPE 503 (770)
Q Consensus 470 aa~~~~~~diS~Ls~~~~~Ley~i~lL~v~ep~e 503 (770)
..... +...++...- +.|.+.++.+..+.+
T Consensus 134 ~~g~~---~~~~Ip~~s~-l~F~VeL~~v~~~~e 163 (180)
T 2f4e_A 134 KEGNF---SFPNVPPMAD-LLYEVEVIGFDETKE 163 (180)
T ss_dssp TTCBS---SSSCBCTTCC-EEEEEEEEEESCBCC
T ss_pred cCCcc---cCCCcCCCCe-EEEEEEEEEEecCcc
Confidence 32210 0011233344 888999988776554
No 319
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=90.68 E-value=0.46 Score=42.84 Aligned_cols=89 Identities=19% Similarity=0.351 Sum_probs=65.1
Q ss_pred ccCCCCceeEEEEEEEEEecccccccceec-----------ccceeeeccCCcccccceeeeeeccccccceecccCCch
Q 004178 397 IYPSNGCLSFISYSVSLVIEGETMKELLES-----------REEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQ 465 (770)
Q Consensus 397 ~~~~~g~~~~i~y~~~l~~~~~~~~~l~e~-----------~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~ 465 (770)
..|..|+.+.|.|...+. +| .++++ ...|.|.+|.+.+.+-++..+..|.+|....|. +||.
T Consensus 18 ~~p~~gd~V~v~Y~g~~~-dG----~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm~~Ge~~~v~--ip~~ 90 (119)
T 3kz7_A 18 NFPKKGDVVHCWYTGTLP-DG----TVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLE--IEPE 90 (119)
T ss_dssp CCCCTTCEEEEEEEEECT-TS----CEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTCCTTCEEEEE--ECGG
T ss_pred CcCCCCCEEEEEEEEEEC-CC----CEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhCCCCCCEEEEE--ECcH
Confidence 579999999999999973 44 24443 268999999999999999999999999999988 7777
Q ss_pred hhhhhccCCccchhhcccccccccceeeeecc
Q 004178 466 ELILAAADDSARTFSLLSSRACCLEYHITLLR 497 (770)
Q Consensus 466 elflaa~~~~~~diS~Ls~~~~~Ley~i~lL~ 497 (770)
..+-...... ..++..+. |.|.+.++.
T Consensus 91 ~aYG~~g~~~----~~Ip~~~~-l~f~veL~~ 117 (119)
T 3kz7_A 91 WAYGKKGQPD----AKIPPNTK-LIFEVELVD 117 (119)
T ss_dssp GTTCTTCBGG----GTBCTTCC-EEEEEEEEE
T ss_pred HhcCCCCCCC----CccCcCCe-EEEEEEEEE
Confidence 6554432111 11233334 677777764
No 320
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=89.35 E-value=0.14 Score=47.68 Aligned_cols=92 Identities=17% Similarity=0.197 Sum_probs=62.1
Q ss_pred CCccCCCCceeEEEEEEEEEecccccccceec----ccceeeeccCCcccccceeeeeeccccccceecccCCchhhhhh
Q 004178 395 SGIYPSNGCLSFISYSVSLVIEGETMKELLES----REEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELILA 470 (770)
Q Consensus 395 ~~~~~~~g~~~~i~y~~~l~~~~~~~~~l~e~----~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elfla 470 (770)
.|-.|..|+.|.|.|+..|.-+|+ ++++ ...|+|.+|.|.+.+-++..+..|.+|....|. +||...+-.
T Consensus 37 ~g~~~~~gd~V~v~Y~g~l~~~G~----~fdss~~~~~p~~f~lG~g~~i~G~e~aL~gm~~Ge~~~v~--ip~~~aYG~ 110 (134)
T 3b7x_A 37 AGDLVAPDASVLVKYSGYLEHMDR----PFDSNYFRKTPRLMKLGEDITLWGMELGLLSMRRGELARFL--FKPNYAYGT 110 (134)
T ss_dssp EEEECCTTCEEEEEEEEECTTCSS----CSEEC-------CEEC-CCCCCHHHHHHHHTCEETCEEEEE--ECGGGTTTT
T ss_pred CCCCCCCCCEEEEEEEEEECCCCe----EEEecCCCCCCEEEEcCCcchhHHHHHHHhCCCCCCEEEEE--ECHHHCcCC
Confidence 577789999999999998753342 3442 357999999999999999999999999999886 676654433
Q ss_pred ccCCccchhhcccccccccceeeeeccc
Q 004178 471 AADDSARTFSLLSSRACCLEYHITLLRV 498 (770)
Q Consensus 471 a~~~~~~diS~Ls~~~~~Ley~i~lL~v 498 (770)
..... .++..+- +.|.+.++.+
T Consensus 111 ~~~~~-----~Ip~~~~-l~f~VeL~~i 132 (134)
T 3b7x_A 111 LGCPP-----LIPPNTT-VLFEIELLDF 132 (134)
T ss_dssp TCBTT-----TBCTTCC-EEEEEEEEEE
T ss_pred CCCCC-----CcCcCCe-EEEEEEEEEE
Confidence 22110 1233333 7777777654
No 321
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=89.18 E-value=0.57 Score=51.41 Aligned_cols=49 Identities=18% Similarity=0.298 Sum_probs=41.2
Q ss_pred CCCCEEEEEcCccchHHHHHh-cCCCCCceEEEEeCChHHHHHHHHHHhh
Q 004178 530 SCATTLVDFGCGSGSLLDSLL-DYPTALEKIVGVDISQKSLSRAAKIIHS 578 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LA-k~ggp~~~VvGVDISeemLe~ArkrL~~ 578 (770)
.++..++|+|++.|.++..++ +..++..+|+++|+++...+..++++..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 567899999999999999887 4443347999999999999999888753
No 322
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=89.17 E-value=0.44 Score=47.92 Aligned_cols=91 Identities=26% Similarity=0.388 Sum_probs=66.9
Q ss_pred CCCccCCCCceeEEEEEEEEEecccccccceec----ccceeeeccCCcccccceeeeeeccccccceecccCCchhhhh
Q 004178 394 DSGIYPSNGCLSFISYSVSLVIEGETMKELLES----REEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELIL 469 (770)
Q Consensus 394 ~~~~~~~~g~~~~i~y~~~l~~~~~~~~~l~e~----~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elfl 469 (770)
.+|..|..|+.+.|.|+..+. +| .++.+ ..-|.|.+|.|.+.+-++..+..|.+|....|. +||...+-
T Consensus 114 G~G~~~~~gd~V~v~Y~g~l~-dG----~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~gM~~Ge~~~v~--Ipp~~aYG 186 (209)
T 3uf8_A 114 GSGAEARAGQTVSVHYTGWLT-DG----QKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLT--IPPQLGYG 186 (209)
T ss_dssp CCSCBCCTTCEEEEEEEEEET-TS----CEEEESGGGTCCEEEETTSSSSCHHHHHHHTTCBTTCEEEEE--ECGGGTTT
T ss_pred CCCCcCCCCCEEEEEEEEEEC-CC----CEEEEccccCCCEEEEeCCCccchhHHHHHhCCCCCCEEEEE--ECcHHhCC
Confidence 367789999999999999983 43 24443 245999999999999999999999999999988 77776654
Q ss_pred hccCCccchhhcccccccccceeeeecc
Q 004178 470 AAADDSARTFSLLSSRACCLEYHITLLR 497 (770)
Q Consensus 470 aa~~~~~~diS~Ls~~~~~Ley~i~lL~ 497 (770)
...... .++..+. |.|.+.++.
T Consensus 187 ~~g~~~-----~IP~~s~-LvF~VeL~~ 208 (209)
T 3uf8_A 187 ARGAAG-----VIPPNAT-LVFEVELLD 208 (209)
T ss_dssp TTCBTT-----TBCTTCC-EEEEEEEEE
T ss_pred CCCCCC-----CcCCCCe-EEEEEEEEE
Confidence 443211 1333444 667776653
No 323
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=89.11 E-value=0.13 Score=68.43 Aligned_cols=103 Identities=13% Similarity=0.096 Sum_probs=50.2
Q ss_pred CCCEEEEEcCccchHHHHHhcCCC--C--CceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPT--A--LEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF 606 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~gg--p--~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl 606 (770)
+..+||+||.|+|..+..+.+... + ..+++-.|+|+.+.+.|++++... +++.-.-|..+.
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~---------------di~~~~~d~~~~ 1304 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL---------------HVTQGQWDPANP 1304 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH---------------TEEEECCCSSCC
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc---------------cccccccccccc
Confidence 457999999999976554432211 1 357899999998888887765321 233222233222
Q ss_pred -CCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEe
Q 004178 607 -DSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVST 650 (770)
Q Consensus 607 -p~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIIST 650 (770)
++...+||+|++..++|-.+ +. ...+.++.++|||| .+++..
T Consensus 1305 ~~~~~~~ydlvia~~vl~~t~-~~-~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1305 APGSLGKADLLVCNCALATLG-DP-AVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp CC-----CCEEEEECC----------------------CCEEEEEE
T ss_pred ccCCCCceeEEEEcccccccc-cH-HHHHHHHHHhcCCCcEEEEEe
Confidence 22346799999999996544 33 34445799999998 655543
No 324
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=89.06 E-value=0.8 Score=48.88 Aligned_cols=67 Identities=15% Similarity=0.144 Sum_probs=51.4
Q ss_pred CCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC-C
Q 004178 532 ATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR-L 610 (770)
Q Consensus 532 ~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~-d 610 (770)
..+++|+.||.|.+...+...+ ...|.++|+++.+++..+.+.. .. . .+|+.++... .
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG--~~~v~~~e~d~~a~~t~~~N~~--------------~~--~---~~Di~~~~~~~~ 69 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG--AECVYSNEWDKYAQEVYEMNFG--------------EK--P---EGDITQVNEKTI 69 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT--CEEEEEECCCHHHHHHHHHHHS--------------CC--C---BSCGGGSCGGGS
T ss_pred CCcEEEECCCcCHHHHHHHHCC--CeEEEEEeCCHHHHHHHHHHcC--------------CC--C---cCCHHHcCHhhC
Confidence 5799999999999999988876 3678899999999998887652 11 1 5788776542 2
Q ss_pred CCccEEEec
Q 004178 611 HGFDIGTCL 619 (770)
Q Consensus 611 ~sFDlVVc~ 619 (770)
..+|+|+..
T Consensus 70 ~~~D~l~~g 78 (327)
T 2c7p_A 70 PDHDILCAG 78 (327)
T ss_dssp CCCSEEEEE
T ss_pred CCCCEEEEC
Confidence 468999874
No 325
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=89.02 E-value=0.31 Score=45.46 Aligned_cols=93 Identities=24% Similarity=0.391 Sum_probs=67.7
Q ss_pred CCc-cCCCCceeEEEEEEEEEecccccccceec----ccceeeeccCCcccccceeeeeeccccccceecccCCchhhhh
Q 004178 395 SGI-YPSNGCLSFISYSVSLVIEGETMKELLES----REEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELIL 469 (770)
Q Consensus 395 ~~~-~~~~g~~~~i~y~~~l~~~~~~~~~l~e~----~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elfl 469 (770)
+|. .|..|+.|.|.|+..+ .+|+ ++++ ...|+|.+|.+.+.+-++..+..|.+|....|. +||...+-
T Consensus 25 ~g~~~~~~gd~V~v~Y~g~~-~dG~----~fdss~~~~~p~~f~lG~~~vi~G~e~~l~gm~~Ge~~~v~--ip~~~aYG 97 (135)
T 1r9h_A 25 QGVVKPTTGTTVKVHYVGTL-ENGT----KFDSSRDRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFT--IRSDYGYG 97 (135)
T ss_dssp BSSCCCCTTCEEEEEEEEEE-TTSC----EEEEHHHHTSCEEEETTTTSSCHHHHHHHTTCCBTCEEEEE--ECGGGTTT
T ss_pred CCCcCCCCCCEEEEEEEEEE-CCCC----EEEecCcCCCCEEEEeCCCCccHHHHHHHhcCCCCCEEEEE--EChHHcCC
Confidence 454 7999999999999997 3442 4553 378999999999999999999999999999987 67766554
Q ss_pred hccCCccchhhcccccccccceeeeecccCC
Q 004178 470 AAADDSARTFSLLSSRACCLEYHITLLRVTE 500 (770)
Q Consensus 470 aa~~~~~~diS~Ls~~~~~Ley~i~lL~v~e 500 (770)
..... ..++...- +.|.+.++.+..
T Consensus 98 ~~g~~-----~~Ip~~~~-l~f~v~l~~i~~ 122 (135)
T 1r9h_A 98 DAGSP-----PKIPGGAT-LIFEVELFEWSA 122 (135)
T ss_dssp TTCBT-----TTBCTTCC-EEEEEEEEEEEC
T ss_pred CCCCC-----CCcCcCCc-EEEEEEEEEeec
Confidence 42211 01223333 777788776554
No 326
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=88.74 E-value=0.41 Score=50.78 Aligned_cols=52 Identities=12% Similarity=0.067 Sum_probs=43.4
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHh
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIH 577 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~ 577 (770)
.+++.. ..+++.|||.-||+|..+....+.+ .+.+|+|+++.+++.|++++.
T Consensus 244 ~~i~~~-~~~~~~VlDpF~GsGtt~~aa~~~g---r~~ig~e~~~~~~~~~~~r~~ 295 (323)
T 1boo_A 244 FFIRML-TEPDDLVVDIFGGSNTTGLVAERES---RKWISFEMKPEYVAASAFRFL 295 (323)
T ss_dssp HHHHHH-CCTTCEEEETTCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHGGGS
T ss_pred HHHHHh-CCCCCEEEECCCCCCHHHHHHHHcC---CCEEEEeCCHHHHHHHHHHHH
Confidence 444433 3468899999999999999888887 799999999999999998773
No 327
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=87.67 E-value=6.8 Score=34.57 Aligned_cols=101 Identities=21% Similarity=0.328 Sum_probs=57.6
Q ss_pred CCEEEEEcCcc-ch-HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC--
Q 004178 532 ATTLVDFGCGS-GS-LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD-- 607 (770)
Q Consensus 532 ~~rVLDIGCGt-G~-ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp-- 607 (770)
..+|+=+|+|. |. ++..|.+.+ .+|+++|.+++.++..++.. .+.++.+|..+..
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g---~~v~~~d~~~~~~~~~~~~~------------------~~~~~~~d~~~~~~l 62 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKG---HDIVLIDIDKDICKKASAEI------------------DALVINGDCTKIKTL 62 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHC------------------SSEEEESCTTSHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CeEEEEECCHHHHHHHHHhc------------------CcEEEEcCCCCHHHH
Confidence 46889999874 33 334455555 78999999988776554311 2445666654321
Q ss_pred --CCCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEecCCchhHH
Q 004178 608 --SRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPNYEYNAI 658 (770)
Q Consensus 608 --~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTPN~efN~l 658 (770)
.....+|+|+..- +.+........+.+.+.++.+++.+.+..+...
T Consensus 63 ~~~~~~~~d~vi~~~-----~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~ 110 (140)
T 1lss_A 63 EDAGIEDADMYIAVT-----GKEEVNLMSSLLAKSYGINKTIARISEIEYKDV 110 (140)
T ss_dssp HHTTTTTCSEEEECC-----SCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHH
T ss_pred HHcCcccCCEEEEee-----CCchHHHHHHHHHHHcCCCEEEEEecCHhHHHH
Confidence 1235789887652 222222333346666777755555555544333
No 328
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=87.61 E-value=1.1 Score=48.11 Aligned_cols=70 Identities=11% Similarity=0.094 Sum_probs=51.2
Q ss_pred CCEEEEEcCccchHHHHHhcCCCCCceE-EEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC-
Q 004178 532 ATTLVDFGCGSGSLLDSLLDYPTALEKI-VGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR- 609 (770)
Q Consensus 532 ~~rVLDIGCGtG~ll~~LAk~ggp~~~V-vGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~- 609 (770)
..+++|+-||.|.+...+.+.+-....| .++|+++.+++..+.+.. .. ++.+|+.++...
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~-----------------~~-~~~~DI~~~~~~~ 71 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFK-----------------EE-VQVKNLDSISIKQ 71 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHC-----------------CC-CBCCCTTTCCHHH
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCC-----------------CC-cccCChhhcCHHH
Confidence 4689999999999999887765112456 799999999988877652 11 456788776542
Q ss_pred --CCCccEEEec
Q 004178 610 --LHGFDIGTCL 619 (770)
Q Consensus 610 --d~sFDlVVc~ 619 (770)
...+|+++..
T Consensus 72 i~~~~~Dil~gg 83 (327)
T 3qv2_A 72 IESLNCNTWFMS 83 (327)
T ss_dssp HHHTCCCEEEEC
T ss_pred hccCCCCEEEec
Confidence 1368999864
No 329
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=86.94 E-value=0.61 Score=49.65 Aligned_cols=57 Identities=14% Similarity=0.226 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhhcCCCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCCh---HHHHHHHHHHh
Q 004178 517 KQRVEYALQHIKESCATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQ---KSLSRAAKIIH 577 (770)
Q Consensus 517 ~qR~e~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISe---emLe~ArkrL~ 577 (770)
..-++.+++... .+++.|||.-||+|..+....+.+ .+.+|+|+++ ..++.|++|+.
T Consensus 229 ~~l~~~~i~~~~-~~~~~vlDpF~GsGtt~~aa~~~~---r~~ig~e~~~~~~~~~~~~~~Rl~ 288 (319)
T 1eg2_A 229 AAVIERLVRALS-HPGSTVLDFFAGSGVTARVAIQEG---RNSICTDAAPVFKEYYQKQLTFLQ 288 (319)
T ss_dssp HHHHHHHHHHHS-CTTCEEEETTCTTCHHHHHHHHHT---CEEEEEESSTHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHhC-CCCCEEEecCCCCCHHHHHHHHcC---CcEEEEECCccHHHHHHHHHHHHH
Confidence 333445555443 468899999999999999888877 7999999999 99999998874
No 330
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=84.33 E-value=5 Score=36.61 Aligned_cols=102 Identities=14% Similarity=0.068 Sum_probs=62.2
Q ss_pred CCEEEEEcCcc-chH-HHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC-
Q 004178 532 ATTLVDFGCGS-GSL-LDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS- 608 (770)
Q Consensus 532 ~~rVLDIGCGt-G~l-l~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~- 608 (770)
..+|+=+|||. |.. +..|.+.+ .+|+++|.+++.++.+++ ..+.++.||..+...
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g---~~v~vid~~~~~~~~~~~-------------------~g~~~i~gd~~~~~~l 64 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASD---IPLVVIETSRTRVDELRE-------------------RGVRAVLGNAANEEIM 64 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT---CCEEEEESCHHHHHHHHH-------------------TTCEEEESCTTSHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHH-------------------cCCCEEECCCCCHHHH
Confidence 35799999985 443 44555555 799999999998877754 145678888765322
Q ss_pred ---CCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHh
Q 004178 609 ---RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQ 660 (770)
Q Consensus 609 ---~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~ 660 (770)
....+|+|++. ++++....+.-...+.+.|+ .++.-..+.+....+.
T Consensus 65 ~~a~i~~ad~vi~~-----~~~~~~n~~~~~~a~~~~~~~~iiar~~~~~~~~~l~ 115 (140)
T 3fwz_A 65 QLAHLECAKWLILT-----IPNGYEAGEIVASARAKNPDIEIIARAHYDDEVAYIT 115 (140)
T ss_dssp HHTTGGGCSEEEEC-----CSCHHHHHHHHHHHHHHCSSSEEEEEESSHHHHHHHH
T ss_pred HhcCcccCCEEEEE-----CCChHHHHHHHHHHHHHCCCCeEEEEECCHHHHHHHH
Confidence 12468887653 22222222222356667787 6666665544444443
No 331
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=83.91 E-value=0.97 Score=44.13 Aligned_cols=71 Identities=18% Similarity=0.219 Sum_probs=54.2
Q ss_pred CCccC--CCCceeEEEEEEEEEeccccccccee--cccceeeeccCCcccccceeeeeeccccccceecccCCchhhh
Q 004178 395 SGIYP--SNGCLSFISYSVSLVIEGETMKELLE--SREEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELI 468 (770)
Q Consensus 395 ~~~~~--~~g~~~~i~y~~~l~~~~~~~~~l~e--~~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elf 468 (770)
+|-.| ..|+.|.+-|+-.|..+ .++.+-=. .+.-|+|-+|.|-|++-.+..+..|.+|..+.|. +||.-..
T Consensus 21 ~G~~p~~~~G~~V~vhY~g~l~d~-~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge~~~~~--ipp~laY 95 (165)
T 2lkn_A 21 RGELPDFQDGTKATFHYRTLHSDD-EGTVLDDSRARGKPMELIIGKKFKLPVWETIVCTMREGEIAQFL--CDIKHVV 95 (165)
T ss_dssp SSCCCCCCTTCEEEEECEEECSSS-SCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTTCCTTCEEEEE--CCHHHHS
T ss_pred cCCCCCCCCCCEEEEEEEEEEeCC-CccEEEecccCCCCEEEEecCCCccHHHHHHHhcCccCceEEEE--ECHHHhc
Confidence 46655 47999999999988632 11222211 2356999999999999999999999999999998 8876543
No 332
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=83.27 E-value=11 Score=37.65 Aligned_cols=93 Identities=16% Similarity=0.096 Sum_probs=59.8
Q ss_pred CEEEEEcCccchHHHHHh----cCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC
Q 004178 533 TTLVDFGCGSGSLLDSLL----DYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS 608 (770)
Q Consensus 533 ~rVLDIGCGtG~ll~~LA----k~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~ 608 (770)
++||=.|+ |.++..++ +.+ .+|++++-++........ .+++++.+|+.++.
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~-------------------~~~~~~~~D~~d~~- 60 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQG---WRIIGTSRNPDQMEAIRA-------------------SGAEPLLWPGEEPS- 60 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGT---CEEEEEESCGGGHHHHHH-------------------TTEEEEESSSSCCC-
T ss_pred CcEEEECC--cHHHHHHHHHHHHCC---CEEEEEEcChhhhhhHhh-------------------CCCeEEEecccccc-
Confidence 68999995 76665444 444 799999988765433221 36899999998866
Q ss_pred CCCCccEEEeccccccCChhHHHHHHHHHHHc-ccCC-EEEEEec
Q 004178 609 RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSS-FRPR-ILIVSTP 651 (770)
Q Consensus 609 ~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rv-LKPG-~LIISTP 651 (770)
..++|+|+...............+.+.+.+. -+.+ ++++++.
T Consensus 61 -~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~ 104 (286)
T 3ius_A 61 -LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTT 104 (286)
T ss_dssp -CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEG
T ss_pred -cCCCCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEEeecc
Confidence 5789999887665444333344555433332 2334 6666664
No 333
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=81.76 E-value=0.85 Score=48.92 Aligned_cols=69 Identities=14% Similarity=0.121 Sum_probs=50.5
Q ss_pred CEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC---
Q 004178 533 TTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR--- 609 (770)
Q Consensus 533 ~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~--- 609 (770)
.+++|+-||.|.+...+.+.+-....|.++|+++.+++.-+.+. +...++.+|+.++...
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~-----------------~~~~~~~~DI~~~~~~~~~ 66 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNF-----------------PETNLLNRNIQQLTPQVIK 66 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC-----------------TTSCEECCCGGGCCHHHHH
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhC-----------------CCCceeccccccCCHHHhc
Confidence 48999999999999888765511245889999999988877654 2334667888776542
Q ss_pred CCCccEEEe
Q 004178 610 LHGFDIGTC 618 (770)
Q Consensus 610 d~sFDlVVc 618 (770)
...+|+++.
T Consensus 67 ~~~~D~l~g 75 (333)
T 4h0n_A 67 KWNVDTILM 75 (333)
T ss_dssp HTTCCEEEE
T ss_pred cCCCCEEEe
Confidence 236899886
No 334
>1x47_A DGCR8 protein; structural genomics, DSRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=81.71 E-value=1.3 Score=39.41 Aligned_cols=77 Identities=14% Similarity=0.110 Sum_probs=55.2
Q ss_pred ccCCCChhhHHHhhhhhcccCcceeecccCCccccccchhhhhhhhhcccccccccccCCCcccCCCceeeEEEEeeccC
Q 004178 207 NWRGSFPREMLFMFCRQHWLSEPVFSTCSNSLKESSESSRFYEKSAALESAETGKECTSGGGTAASDNVRCEVKIFSKSR 286 (770)
Q Consensus 207 ~w~g~~p~~~l~~fc~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 286 (770)
++.+.-|..+|-.+|..+.+..|.|.... ..| .. ..|.|+|.|-.+.
T Consensus 12 ~~~~kd~Kt~LqE~~Q~~~~~~P~Y~~~~----------------------------~~G--p~--~~F~~~V~v~g~~- 58 (98)
T 1x47_A 12 NPNGKSEVCILHEYMQRVLKVRPVYNFFE----------------------------CEN--PS--EPFGASVTIDGVT- 58 (98)
T ss_dssp CTTCCCHHHHHHHHHHHHTCSCCEEEEEE----------------------------CSS--SS--CCEEEEEEETTEE-
T ss_pred cCCCCCHHHHHHHHHHHcCCCCCeEEEEE----------------------------eEC--CC--CcEEEEEEECCEE-
Confidence 34566799999999999999999998760 011 11 5599999884321
Q ss_pred CcccccCchhhhhhhhhhHhhhhhHHHHHHHhhhCC
Q 004178 287 DPILECSPKEFYKKQNESIENASLKVLSWLNAYFKD 322 (770)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~ 322 (770)
+ ....-+..-+|=|+||..+|.+|..-|++
T Consensus 59 -----~-~~G~G~SKK~Aeq~AA~~AL~~L~~~~~~ 88 (98)
T 1x47_A 59 -----Y-GSGTASSKKLAKNKAARATLEILIPDFVK 88 (98)
T ss_dssp -----E-EEEEESSHHHHHHHHHHHHHHHHCSSSSC
T ss_pred -----E-EEeeeCCHHHHHHHHHHHHHHHHHhhhhh
Confidence 1 12334666789999999999999755555
No 335
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=81.49 E-value=1.9 Score=45.53 Aligned_cols=72 Identities=11% Similarity=0.128 Sum_probs=52.7
Q ss_pred CCCCEEEEEcCccchHHHHHhcCCCCCce-EEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC
Q 004178 530 SCATTLVDFGCGSGSLLDSLLDYPTALEK-IVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS 608 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~ll~~LAk~ggp~~~-VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~ 608 (770)
....+++|+=||.|.+...+.+.+- ... |.++|+++.+++.-+.+. +...+..+|+.++..
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~-~~~~v~a~E~d~~a~~ty~~N~-----------------~~~~~~~~DI~~i~~ 75 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGI-QVDRYIASEVCEDSITVGMVRH-----------------QGKIMYVGDVRSVTQ 75 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTB-CEEEEEEECCCHHHHHHHHHHT-----------------TTCEEEECCGGGCCH
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCC-ccceEEEEECCHHHHHHHHHhC-----------------CCCceeCCChHHccH
Confidence 3456999999999999988887761 122 699999999888766543 234677889887654
Q ss_pred C----CCCccEEEec
Q 004178 609 R----LHGFDIGTCL 619 (770)
Q Consensus 609 ~----d~sFDlVVc~ 619 (770)
. ...+|+++..
T Consensus 76 ~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 76 KHIQEWGPFDLVIGG 90 (295)
T ss_dssp HHHHHTCCCSEEEEC
T ss_pred HHhcccCCcCEEEec
Confidence 2 2469999873
No 336
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=81.32 E-value=2.6 Score=44.00 Aligned_cols=66 Identities=18% Similarity=0.125 Sum_probs=51.0
Q ss_pred CEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC-CC
Q 004178 533 TTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR-LH 611 (770)
Q Consensus 533 ~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~-d~ 611 (770)
.+|||+=||-|.+..-|.+.+ ..-|.++|+++.+++.-+.+. .-.++.+|+.++... ..
T Consensus 1 mkvidLFsG~GG~~~G~~~aG--~~~v~a~e~d~~a~~ty~~N~------------------~~~~~~~DI~~i~~~~~~ 60 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAG--FRIICANEYDKSIWKTYESNH------------------SAKLIKGDISKISSDEFP 60 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTT--CEEEEEEECCTTTHHHHHHHC------------------CSEEEESCGGGCCGGGSC
T ss_pred CeEEEeCcCccHHHHHHHHCC--CEEEEEEeCCHHHHHHHHHHC------------------CCCcccCChhhCCHhhCC
Confidence 379999999999998887776 356789999999888776643 125678999887653 35
Q ss_pred CccEEEe
Q 004178 612 GFDIGTC 618 (770)
Q Consensus 612 sFDlVVc 618 (770)
.+|+++.
T Consensus 61 ~~D~l~g 67 (331)
T 3ubt_Y 61 KCDGIIG 67 (331)
T ss_dssp CCSEEEC
T ss_pred cccEEEe
Confidence 7899886
No 337
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=81.14 E-value=2 Score=44.88 Aligned_cols=93 Identities=25% Similarity=0.468 Sum_probs=66.8
Q ss_pred CCcc-CCCCceeEEEEEEEEEecccccccceec----ccceeeeccCCcccccceeeeeeccccccceecccCCchhhhh
Q 004178 395 SGIY-PSNGCLSFISYSVSLVIEGETMKELLES----REEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELIL 469 (770)
Q Consensus 395 ~~~~-~~~g~~~~i~y~~~l~~~~~~~~~l~e~----~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elfl 469 (770)
.|-. |..|..|.|.|+..+ .+|+ ++++ ...|+|.+|.+.+++-++..+..|.+|....|. +||...+-
T Consensus 62 ~G~~~~~~gd~V~v~Y~g~~-~dG~----~fdss~~~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~--ipp~~aYG 134 (280)
T 1q1c_A 62 TGTEMPMIGDRVFVHYTGWL-LDGT----KFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHIT--CKPEYAYG 134 (280)
T ss_dssp SSSCCCCTTCEEEEEEEEEE-TTSC----EEEESTTSSSCEEEETTTTSSCHHHHHHHTTCCTTCEEEEE--ECGGGTTT
T ss_pred CCCcCCCCCCEEEEEEEEEE-CCCC----EEEecccCCCCEEEEECCcChhHHHHHHHhcCCCCCEEEEE--ECcHHhCC
Confidence 4554 999999999999997 3442 4443 368999999999999999999999999999986 67766554
Q ss_pred hccCCccchhhcccccccccceeeeecccCC
Q 004178 470 AAADDSARTFSLLSSRACCLEYHITLLRVTE 500 (770)
Q Consensus 470 aa~~~~~~diS~Ls~~~~~Ley~i~lL~v~e 500 (770)
...... .++..+- +.|.+.++.+..
T Consensus 135 ~~g~~~-----~Ip~~~~-lvf~Vel~~i~~ 159 (280)
T 1q1c_A 135 SAGSPP-----KIPPNAT-LVFEVELFEFKG 159 (280)
T ss_dssp TTCBTT-----TBCTTCC-EEEEEEEEEEEC
T ss_pred CcCccC-----CCCCCCc-EEEEEEeeeecc
Confidence 332111 1222333 677777776543
No 338
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=80.95 E-value=6.2 Score=42.14 Aligned_cols=137 Identities=12% Similarity=0.039 Sum_probs=72.1
Q ss_pred hhhhhcCCc---hHHHHHHHHHHHH-----hhcCCCCEEEEEcCccchHHHHHh----cCCCCC--ceEEEEeCCh----
Q 004178 505 RMEQALFSP---PLSKQRVEYALQH-----IKESCATTLVDFGCGSGSLLDSLL----DYPTAL--EKIVGVDISQ---- 566 (770)
Q Consensus 505 R~e~~~F~P---PL~~qR~e~Il~~-----L~~~~~~rVLDIGCGtG~ll~~LA----k~ggp~--~~VvGVDISe---- 566 (770)
++...+|+. .+.+.++-|+... ......-+|||+|-|+|.++.... +.. +. .+++++|..+
T Consensus 62 ~f~e~YhS~~~GAl~Es~hVFi~~~~L~~r~~~~~~~~IlE~GFGTGLNfl~t~~~~~~~~-~~~~L~~iS~Ek~pl~~~ 140 (308)
T 3vyw_A 62 TYGEPYHSQTAGAIRESLYKFVRPSRILEKAKERKVIRILDVGFGLGYNLAVALKHLWEVN-PKLRVEIISFEKELLKEF 140 (308)
T ss_dssp TTTEESSCTTTCHHHHHHHHTHHHHTHHHHHHHCSEEEEEEECCTTSHHHHHHHHHHHHHC-TTCEEEEEEEESSCCSCC
T ss_pred ccCCccCCCCCcHHHHHHHHHhccCCchHHhcCCCCcEEEEeCCCccHHHHHHHHHHHHhC-CCcceEEEeecHHHHHhh
Confidence 344555552 3677777776532 223344689999999998754322 111 22 3567777422
Q ss_pred ----H-HHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc-CC-CCCCccEEEeccccccCChhHH-HHHHHHHH
Q 004178 567 ----K-SLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF-DS-RLHGFDIGTCLEVIEHMEEDEA-SQFGNIVL 638 (770)
Q Consensus 567 ----e-mLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl-p~-~d~sFDlVVc~eVLEHL~~d~~-~~fleeI~ 638 (770)
+ .-+.....+.... .. ..+.-.+++..||+.+. +. ....||+|+.-..--.-.++-+ ..+++.++
T Consensus 141 ~~~~~~~~~l~~~l~~~~p-~~------~~~~v~L~l~~GDa~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~ 213 (308)
T 3vyw_A 141 PILPEPYREIHEFLLERVP-EY------EGERLSLKVLLGDARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIK 213 (308)
T ss_dssp CCCCTTSHHHHHHHHHHCS-EE------ECSSEEEEEEESCHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHH
T ss_pred HhchHhHHHHHHHHHHhCc-cc------cCCcEEEEEEechHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHH
Confidence 1 1111111111100 00 12223567889998663 22 2347999977542222221211 35556799
Q ss_pred HcccCCEEEEE
Q 004178 639 SSFRPRILIVS 649 (770)
Q Consensus 639 rvLKPG~LIIS 649 (770)
++++||..++|
T Consensus 214 ~~~~pgg~laT 224 (308)
T 3vyw_A 214 ERIDEKGYWVS 224 (308)
T ss_dssp TTEEEEEEEEE
T ss_pred HHhCCCcEEEE
Confidence 99999965554
No 339
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=80.34 E-value=4.8 Score=44.22 Aligned_cols=78 Identities=13% Similarity=0.165 Sum_probs=54.2
Q ss_pred CCCEEEEEcCccchHHHHHhcCC------CCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcc
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYP------TALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSIT 604 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~g------gp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDae 604 (770)
.+-.|+|+|.|.|.++..+++.. ....+++.||+|+...+.-++++. ...+|.+. .++.
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~--------------~~~~v~W~-~~l~ 144 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA--------------GIRNIHWH-DSFE 144 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST--------------TCSSEEEE-SSGG
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc--------------CCCCeEEe-CChh
Confidence 34589999999999977665321 012589999999988876655542 11257665 3566
Q ss_pred ccCCCCCCccEEEeccccccCC
Q 004178 605 VFDSRLHGFDIGTCLEVIEHME 626 (770)
Q Consensus 605 dlp~~d~sFDlVVc~eVLEHL~ 626 (770)
+++. ..-+|++++++.-+|
T Consensus 145 ~lp~---~~~~viANE~fDAlP 163 (387)
T 1zkd_A 145 DVPE---GPAVILANEYFDVLP 163 (387)
T ss_dssp GSCC---SSEEEEEESSGGGSC
T ss_pred hcCC---CCeEEEeccccccCc
Confidence 6653 255899999999988
No 340
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=80.06 E-value=1.3 Score=40.31 Aligned_cols=58 Identities=21% Similarity=0.350 Sum_probs=49.7
Q ss_pred cCCCCceeEEEEEEEEEeccccccccee--cccceeeeccCCcccccceeeeeeccccccceeccc
Q 004178 398 YPSNGCLSFISYSVSLVIEGETMKELLE--SREEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKE 461 (770)
Q Consensus 398 ~~~~g~~~~i~y~~~l~~~~~~~~~l~e--~~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~ 461 (770)
-|..|..|.|.|+..+ +|+ +++ ..+.|.|.+|.|.+++-++..+..|.+|+...|.-.
T Consensus 29 ~~~~gD~V~v~Y~g~~--dG~----~fdss~~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~ 88 (113)
T 1hxv_A 29 KLANGDIAIIDFTGIV--DNK----KLASASAQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALT 88 (113)
T ss_dssp CCCSSEEEEEEEEEEE--TTE----ECSTTCCSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCC
T ss_pred CCCCCCEEEEEEEEEE--CCE----EcccCCccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEe
Confidence 4789999999999997 654 344 257899999999999999999999999999998843
No 341
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=79.67 E-value=3.2 Score=43.61 Aligned_cols=47 Identities=15% Similarity=0.037 Sum_probs=38.2
Q ss_pred HhhcCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 526 HIKESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 526 ~L~~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
..+..++++||-+|+|. |.++..+++..+ .+|+++|.+++-++.+++
T Consensus 171 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~ 218 (348)
T 3two_A 171 FSKVTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQDALS 218 (348)
T ss_dssp HTTCCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHHHHHH
T ss_pred hcCCCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHh
Confidence 34666789999999985 888888887654 699999999998888865
No 342
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=79.59 E-value=0.84 Score=47.77 Aligned_cols=97 Identities=19% Similarity=0.218 Sum_probs=67.7
Q ss_pred CCccCCCCceeEEEEEEEEEeccccccccee----cccceeeeccCC-cccccceeeeeeccccccceecccCCchhhhh
Q 004178 395 SGIYPSNGCLSFISYSVSLVIEGETMKELLE----SREEFEFEMGTG-AVIPQVEVVTAQMSVGQSACFCKELPPQELIL 469 (770)
Q Consensus 395 ~~~~~~~g~~~~i~y~~~l~~~~~~~~~l~e----~~~ef~fe~g~~-~~~~~~~~~~~~~sv~q~~~~~~~l~p~elfl 469 (770)
.|-.|..|+.|.|.|+..+..+|+ .++ ....|+|.+|.| .+++-++..+..|.+|....|. +||..-+-
T Consensus 60 ~g~~~~~gd~v~v~y~g~~~~~g~----~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~~~~--i~~~~~yg 133 (338)
T 2if4_A 60 HGSKPSKYSTCFLHYRAWTKNSQH----KFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVH--VGWELAYG 133 (338)
T ss_dssp BSCCCCTTCEEEEEEEEEETTTCC----CCEEHHHHTCCEEEETTSCCGGGHHHHHHHHHCCBTCEEEEE--ECGGGSSC
T ss_pred CCCCCCCCCEEEEEEEEEEcCCCc----EeecccCCCCCeEEEcCCCCcccHHHHHHHhcCCCCCeEEEE--ECHHHhcC
Confidence 567899999999999999864442 343 246899999999 8999999999999999998887 67665443
Q ss_pred hccCCccchhhcccccccccceeeeecccCCC
Q 004178 470 AAADDSARTFSLLSSRACCLEYHITLLRVTEP 501 (770)
Q Consensus 470 aa~~~~~~diS~Ls~~~~~Ley~i~lL~v~ep 501 (770)
...... ...++.... +.|.+.++.+..+
T Consensus 134 ~~~~~~---~~~ip~~~~-l~f~v~L~~~~~~ 161 (338)
T 2if4_A 134 KEGNFS---FPNVPPMAD-LLYEVEVIGFDET 161 (338)
T ss_dssp SSCCCS---SSCCCTTCC-EEEEEEEEEEECC
T ss_pred CCCCCC---CCCCCCCCc-EEEEEEEEEecCC
Confidence 322100 011222333 6677777765543
No 343
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=79.47 E-value=1.1 Score=43.35 Aligned_cols=62 Identities=26% Similarity=0.480 Sum_probs=51.5
Q ss_pred CCCceeEEEEEEEEEecccccccceecc-----------------cceeeeccCCcccccceeeeeeccccccceecccC
Q 004178 400 SNGCLSFISYSVSLVIEGETMKELLESR-----------------EEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKEL 462 (770)
Q Consensus 400 ~~g~~~~i~y~~~l~~~~~~~~~l~e~~-----------------~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l 462 (770)
..|+.+.|.|+..| +|+ ++++. +-++|.+|.|.+.+-++..+..|.+|+...|. +
T Consensus 3 ~~Gd~V~v~Y~g~l--dG~----vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~--I 74 (157)
T 3pr9_A 3 EKGKMVKISYDGYV--DGK----LFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVV--L 74 (157)
T ss_dssp CTTCEEEEEEEEEE--TTE----EEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEE--E
T ss_pred CCCCEEEEEEEEEE--CCE----EEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEE--E
Confidence 67999999999999 653 44422 46999999999999999999999999999888 7
Q ss_pred Cchhhhh
Q 004178 463 PPQELIL 469 (770)
Q Consensus 463 ~p~elfl 469 (770)
||.+.+-
T Consensus 75 pp~~aYG 81 (157)
T 3pr9_A 75 PPEKAFG 81 (157)
T ss_dssp CGGGTTC
T ss_pred CcHHhcC
Confidence 7766543
No 344
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=79.30 E-value=12 Score=33.51 Aligned_cols=102 Identities=17% Similarity=0.081 Sum_probs=59.4
Q ss_pred CCEEEEEcCcc-ch-HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC-
Q 004178 532 ATTLVDFGCGS-GS-LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS- 608 (770)
Q Consensus 532 ~~rVLDIGCGt-G~-ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~- 608 (770)
..+|+=+|||. |. ++..|.+.+ .+|+++|.+++.++.+++ ..+.++.+|+.+...
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g---~~V~~id~~~~~~~~~~~-------------------~~~~~~~gd~~~~~~l 63 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAG---KKVLAVDKSKEKIELLED-------------------EGFDAVIADPTDESFY 63 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT---CCEEEEESCHHHHHHHHH-------------------TTCEEEECCTTCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CeEEEEECCHHHHHHHHH-------------------CCCcEEECCCCCHHHH
Confidence 45799999974 33 344555555 789999999988776654 135677888765321
Q ss_pred ---CCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEecCCchhHHHh
Q 004178 609 ---RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPNYEYNAILQ 660 (770)
Q Consensus 609 ---~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTPN~efN~lf~ 660 (770)
....+|+|+..-- ++......-...+.+....++....+..+...+.
T Consensus 64 ~~~~~~~~d~vi~~~~-----~~~~n~~~~~~a~~~~~~~iia~~~~~~~~~~l~ 113 (141)
T 3llv_A 64 RSLDLEGVSAVLITGS-----DDEFNLKILKALRSVSDVYAIVRVSSPKKKEEFE 113 (141)
T ss_dssp HHSCCTTCSEEEECCS-----CHHHHHHHHHHHHHHCCCCEEEEESCGGGHHHHH
T ss_pred HhCCcccCCEEEEecC-----CHHHHHHHHHHHHHhCCceEEEEEcChhHHHHHH
Confidence 2356888765332 2333233223444455335555555544444443
No 345
>3adg_A F21M12.9 protein; HYL1, miRNA processing mechanism, RNA binding protein, gene regulation; 1.70A {Arabidopsis thaliana} PDB: 3adi_A
Probab=79.20 E-value=2 Score=35.80 Aligned_cols=69 Identities=13% Similarity=0.129 Sum_probs=48.3
Q ss_pred ChhhHHHhhhhhcccCcceeecccCCccccccchhhhhhhhhcccccccccccCCCcccCCCceeeEEEEeeccCCcccc
Q 004178 212 FPREMLFMFCRQHWLSEPVFSTCSNSLKESSESSRFYEKSAALESAETGKECTSGGGTAASDNVRCEVKIFSKSRDPILE 291 (770)
Q Consensus 212 ~p~~~l~~fc~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 291 (770)
-|+..|-.+|..+.+..|.|... .. |......|.|+|.|-.+ .
T Consensus 4 d~Kt~LqE~~q~~~~~~p~Y~~~-----------------------------~~--Gp~h~~~F~~~v~v~g~------~ 46 (73)
T 3adg_A 4 VFKSRLQEYAQKYKLPTPVYEIV-----------------------------KE--GPSHKSLFQSTVILDGV------R 46 (73)
T ss_dssp SHHHHHHHHHHHTTCCCCEEEEE-----------------------------EE--SSTTSCEEEEEEEETTE------E
T ss_pred CHHHHHHHHHHHcCCCCCEEEEE-----------------------------eE--CCCCCCeEEEEEEECCE------E
Confidence 47899999999999999999776 11 22223349999998532 1
Q ss_pred cCchhhhhhhhhhHhhhhhHHHHHHH
Q 004178 292 CSPKEFYKKQNESIENASLKVLSWLN 317 (770)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~l~~l~~~~ 317 (770)
+....-++...+|=|+||..+|.+|.
T Consensus 47 ~~~G~G~~sKK~Aeq~AA~~al~~L~ 72 (73)
T 3adg_A 47 YNSLPGFFNRKAAEQSAAEVALRELA 72 (73)
T ss_dssp EECCSCBSSHHHHHHHHHHHHHHHHT
T ss_pred EEeeeccCCHHHHHHHHHHHHHHHhh
Confidence 22222225667899999999998874
No 346
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=78.73 E-value=1.1 Score=48.93 Aligned_cols=68 Identities=26% Similarity=0.401 Sum_probs=50.8
Q ss_pred CCcc-CCCCceeEEEEEEEEEecccccccceec----ccceeeeccCCcccccceeeeeeccccccceecccCCchhhhh
Q 004178 395 SGIY-PSNGCLSFISYSVSLVIEGETMKELLES----REEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELIL 469 (770)
Q Consensus 395 ~~~~-~~~g~~~~i~y~~~l~~~~~~~~~l~e~----~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elfl 469 (770)
.|.. |..|..|.|.|+..+ .+|+ ++.+ ...|+|.+|.|.+++-++..+..|.+|..+.|. +||...+-
T Consensus 42 ~g~~~~~~gd~v~v~y~~~~-~~g~----~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~m~~Ge~~~~~--i~~~~~yg 114 (457)
T 1kt0_A 42 NGEETPMIGDKVYVHYKGKL-SNGK----KFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKRGEICHLL--CKPEYAYG 114 (457)
T ss_dssp ----CCCBTCEEEEEEEEEC----------CBC------CEEEETTSTTSCHHHHHHHTTCCTTCEEEEE--ECGGGTTT
T ss_pred CCCCCCCCCCEEEEEEEEEE-CCCC----EEeccCCCCCCeEEEeCCcchhhHHHHHHhhCCCCCEEEEE--EChHHhcc
Confidence 4555 999999999999997 4543 3442 357999999999999999999999999999988 77776554
No 347
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=78.52 E-value=2 Score=46.19 Aligned_cols=95 Identities=19% Similarity=0.280 Sum_probs=70.0
Q ss_pred ccCCCCceeEEEEEEEEEecccccccceecccceeeeccCCcccccceeeeeeccccccceecccCCchhhhhhccCCcc
Q 004178 397 IYPSNGCLSFISYSVSLVIEGETMKELLESREEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELILAAADDSA 476 (770)
Q Consensus 397 ~~~~~g~~~~i~y~~~l~~~~~~~~~l~e~~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elflaa~~~~~ 476 (770)
..|..|..|.|.|+..|. +|. ++.+.+.++|.+|.|.+.+-++..+..|-+|..+.+. ++|+-.+-.......
T Consensus 141 ~~p~~g~~V~v~y~g~l~-dgt----~~~~~~~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~~--v~p~~~yg~~G~~~~ 213 (356)
T 3jxv_A 141 ENPKDPDEVFVKYEARLE-DGT----VVSKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLA--VKPQYGFGEMGRPAA 213 (356)
T ss_dssp CCCCTTCEEEEEEEEEET-TSC----EEEEEEEEEEEGGGCSSSHHHHHHHTTCCBTCEEEEE--ECGGGTTTTTCBCCC
T ss_pred CCCCCCCEEEEEEEEEEC-CCC----EEeccCCEEEEeCCCCcchHHHHHHhhCCCCCEEEEE--EChHhhcCCCCCCcc
Confidence 689999999999999986 432 4455568999999999999999999999999999888 667644443322221
Q ss_pred chhhcccccccccceeeeecccC
Q 004178 477 RTFSLLSSRACCLEYHITLLRVT 499 (770)
Q Consensus 477 ~diS~Ls~~~~~Ley~i~lL~v~ 499 (770)
.....++..+. |.|.+.++...
T Consensus 214 ~~~~~ip~~~~-l~~~vel~~~~ 235 (356)
T 3jxv_A 214 GEGGAVPPNAS-LVIDLELVSWK 235 (356)
T ss_dssp C--CCBCTTCC-EEEEEEEEEEE
T ss_pred cccccCCCCcE-EEEEEEEEEEe
Confidence 12223555566 88888888653
No 348
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=78.45 E-value=1.2 Score=43.72 Aligned_cols=64 Identities=19% Similarity=0.334 Sum_probs=53.1
Q ss_pred CCCCceeEEEEEEEEEecccccccceecc----cceeeeccCCcccccceeeeeeccccccceecccCCchhhhh
Q 004178 399 PSNGCLSFISYSVSLVIEGETMKELLESR----EEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELIL 469 (770)
Q Consensus 399 ~~~g~~~~i~y~~~l~~~~~~~~~l~e~~----~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elfl 469 (770)
+..|+.+.|.|+..+. +| .++++. +-+.|.+|.|.+++-++..+..|.+|+...|. |||.+.+-
T Consensus 25 i~~gd~V~v~Y~g~l~-dG----~vfDss~~~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~--Ipp~~AYG 92 (169)
T 4dt4_A 25 VQSNSAVLVHFTLKLD-DG----TTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFS--LEPDAAFG 92 (169)
T ss_dssp CCTTCEEEEEEEEEET-TS----CEEEEHHHHTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEE--ECGGGTTC
T ss_pred CCCCCEEEEEEEEEEC-CC----CEEEecCCCCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEE--EChHHhcC
Confidence 4788999999999874 44 356632 67999999999999999999999999999988 77776553
No 349
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=76.62 E-value=1.3 Score=40.65 Aligned_cols=69 Identities=23% Similarity=0.314 Sum_probs=53.9
Q ss_pred CCccCCCCceeEEEEEEEEEecccccccceec----ccceeeeccCCcccccceeeeee------ccccccceecccCCc
Q 004178 395 SGIYPSNGCLSFISYSVSLVIEGETMKELLES----REEFEFEMGTGAVIPQVEVVTAQ------MSVGQSACFCKELPP 464 (770)
Q Consensus 395 ~~~~~~~g~~~~i~y~~~l~~~~~~~~~l~e~----~~ef~fe~g~~~~~~~~~~~~~~------~sv~q~~~~~~~l~p 464 (770)
.|-.|..|..+.|.|+..+. +|+ ++++ .+.|+|.+|.+.+.+-++..+.. |.+|....|. +||
T Consensus 23 ~G~~~~~gd~V~v~Y~g~~~-dG~----~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m~~Ge~~~v~--ip~ 95 (129)
T 1u79_A 23 YGPEAVKGQLIKAHYVGKLE-NGK----VFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGKRTLR--IPP 95 (129)
T ss_dssp SSCBCCTTCEEEEEEEEECT-TSC----EEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCCBTTCEEEEE--ECG
T ss_pred CCCCCCCCCEEEEEEEEEEC-CCC----EEEecCCCCCCEEEEeCCCCccHHHHHHhcccccccccCCCCEEEEE--ECh
Confidence 56789999999999999873 432 4442 36799999999999998877654 9999999986 777
Q ss_pred hhhhhh
Q 004178 465 QELILA 470 (770)
Q Consensus 465 ~elfla 470 (770)
...+-.
T Consensus 96 ~~aYG~ 101 (129)
T 1u79_A 96 ELAYGD 101 (129)
T ss_dssp GGTTGG
T ss_pred HHccCC
Confidence 665543
No 350
>1ekz_A DSRBDIII, maternal effect protein (staufen); structure, protein/RNA, protein DSRBD, RNA hairpin; NMR {Drosophila melanogaster} SCOP: d.50.1.1 PDB: 1stu_A
Probab=76.52 E-value=2.9 Score=35.13 Aligned_cols=68 Identities=16% Similarity=0.082 Sum_probs=47.9
Q ss_pred CChhhHHHhhhhhcccCcceeecccCCccccccchhhhhhhhhcccccccccccCCCcccCCCceeeEEEEeeccCCccc
Q 004178 211 SFPREMLFMFCRQHWLSEPVFSTCSNSLKESSESSRFYEKSAALESAETGKECTSGGGTAASDNVRCEVKIFSKSRDPIL 290 (770)
Q Consensus 211 ~~p~~~l~~fc~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 290 (770)
.-|...|-.+|..+.+. |.|.... .. |......|.|+|.|- + ++
T Consensus 7 ~d~ks~LqE~~q~~~~~-p~Y~~~~----------------------------~~--Gp~h~~~F~~~v~i~----~-~~ 50 (76)
T 1ekz_A 7 KSPISQVHEIGIKRNMT-VHFKVLR----------------------------EE--GPAHMKNFITACIVG----S-IV 50 (76)
T ss_dssp SCHHHHHHHHHHHTTCC-CEEEESS----------------------------SC--CSSSCSCSSEEEEET----T-EE
T ss_pred CCHHHHHHHHHHHcCCC-CEEEEEE----------------------------eE--CCCCCCcEEEEEEEC----C-EE
Confidence 45899999999999998 9998650 01 222234499999983 2 11
Q ss_pred ccCchhhhhhhhhhHhhhhhHHHHHHH
Q 004178 291 ECSPKEFYKKQNESIENASLKVLSWLN 317 (770)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~l~~l~~~~ 317 (770)
....-+..-+|=|+||..+|..|.
T Consensus 51 ---~~G~G~sKK~Aeq~AA~~aL~~L~ 74 (76)
T 1ekz_A 51 ---TEGEGNGKKVSKKRAAEKMLVELQ 74 (76)
T ss_dssp ---EEECCCSTTSSSHHHHHHHHHHHT
T ss_pred ---EEEeeCCHHHHHHHHHHHHHHHHh
Confidence 223335667899999999998874
No 351
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=75.75 E-value=1.2 Score=46.99 Aligned_cols=73 Identities=8% Similarity=-0.068 Sum_probs=55.5
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccc-c---
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITV-F--- 606 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaed-l--- 606 (770)
.+..+||+=+|+|.++..++..+ .+++.+|.++..++.-++++. ...+++++.+|... +
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~~---d~~vfvE~~~~a~~~L~~Nl~--------------~~~~~~V~~~D~~~~L~~l 153 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRSQ---DRLYLCELHPTEYNFLLKLPH--------------FNKKVYVNHTDGVSKLNAL 153 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCTT---SEEEEECCSHHHHHHHTTSCC--------------TTSCEEEECSCHHHHHHHH
T ss_pred cCCCceeEeCCcHHHHHHHcCCC---CeEEEEeCCHHHHHHHHHHhC--------------cCCcEEEEeCcHHHHHHHh
Confidence 45678999999999999998844 899999999999988877552 13578999999543 1
Q ss_pred CCCCCCccEEEecc
Q 004178 607 DSRLHGFDIGTCLE 620 (770)
Q Consensus 607 p~~d~sFDlVVc~e 620 (770)
..+...||+|++-=
T Consensus 154 ~~~~~~fdLVfiDP 167 (283)
T 2oo3_A 154 LPPPEKRGLIFIDP 167 (283)
T ss_dssp CSCTTSCEEEEECC
T ss_pred cCCCCCccEEEECC
Confidence 22335699997643
No 352
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=75.26 E-value=2.7 Score=47.43 Aligned_cols=60 Identities=10% Similarity=0.062 Sum_probs=44.8
Q ss_pred CCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 532 ATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 532 ~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
.-+++|+=||.|.+..-|.+.+ ...|.++|+++.+++.-+.+.. ..+...++.+|+.++.
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG--~~~v~avE~d~~A~~ty~~N~~--------------~~p~~~~~~~DI~~i~ 147 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIG--GQCVFTSEWNKHAVRTYKANHY--------------CDPATHHFNEDIRDIT 147 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTT--EEEEEEECCCHHHHHHHHHHSC--------------CCTTTCEEESCTHHHH
T ss_pred cceEEEecCCccHHHHHHHHCC--CEEEEEEeCCHHHHHHHHHhcc--------------cCCCcceeccchhhhh
Confidence 4689999999999999888776 2558999999988887766531 1123456678887654
No 353
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=73.85 E-value=4 Score=45.54 Aligned_cols=89 Identities=21% Similarity=0.313 Sum_probs=58.4
Q ss_pred HHHHHhhcCCCCEEEEEcCccchHHHHHhc----CCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEE
Q 004178 522 YALQHIKESCATTLVDFGCGSGSLLDSLLD----YPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAV 597 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGCGtG~ll~~LAk----~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Ve 597 (770)
++.+.+......+|+|+|.|.|.++.-+++ ......+++.||+|+.+.+.-++++.... .....+|.
T Consensus 128 ~~~~~~~~~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~---------~~~~~~v~ 198 (432)
T 4f3n_A 128 PVAQALDASGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGAQA---------PGLAARVR 198 (432)
T ss_dssp HHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHHHS---------TTTGGGEE
T ss_pred HHHHHHHhcCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhccc---------cccCCCce
Confidence 344444433457999999999998776653 22112589999999998887777764321 01123677
Q ss_pred EEECCccccCCCCCCcc-EEEeccccccCC
Q 004178 598 LFDGSITVFDSRLHGFD-IGTCLEVIEHME 626 (770)
Q Consensus 598 f~~GDaedlp~~d~sFD-lVVc~eVLEHL~ 626 (770)
|.. + +| ..|. +|++++++.-+|
T Consensus 199 W~~-~---lP---~~~~g~iiANE~fDAlP 221 (432)
T 4f3n_A 199 WLD-A---LP---ERFEGVVVGNEVLDAMP 221 (432)
T ss_dssp EES-S---CC---SCEEEEEEEESCGGGSC
T ss_pred ecc-c---CC---ccCceEEEeehhhccCc
Confidence 754 2 33 2355 888999999888
No 354
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=73.81 E-value=15 Score=34.61 Aligned_cols=93 Identities=12% Similarity=0.096 Sum_probs=54.2
Q ss_pred CCEEEEEcCcc-chH-HHHHhcC-CCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC-
Q 004178 532 ATTLVDFGCGS-GSL-LDSLLDY-PTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD- 607 (770)
Q Consensus 532 ~~rVLDIGCGt-G~l-l~~LAk~-ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp- 607 (770)
+.+|+=+|||. |.. +..|.+. + .+|+++|.+++.++.+++ ..+..+.+|..+..
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g---~~V~vid~~~~~~~~~~~-------------------~g~~~~~gd~~~~~~ 96 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG---KISLGIEIREEAAQQHRS-------------------EGRNVISGDATDPDF 96 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC---SCEEEEESCHHHHHHHHH-------------------TTCCEEECCTTCHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC---CeEEEEECCHHHHHHHHH-------------------CCCCEEEcCCCCHHH
Confidence 56899999874 433 3444454 5 789999999987776543 12445666664421
Q ss_pred --C--CCCCccEEEeccccccCChhH-HHHHHHHHHHcccCC-EEEEEecC
Q 004178 608 --S--RLHGFDIGTCLEVIEHMEEDE-ASQFGNIVLSSFRPR-ILIVSTPN 652 (770)
Q Consensus 608 --~--~d~sFDlVVc~eVLEHL~~d~-~~~fleeI~rvLKPG-~LIISTPN 652 (770)
. ....+|+|+..- +.+. ...+. ...+.+.|+ .++..+.+
T Consensus 97 l~~~~~~~~ad~vi~~~-----~~~~~~~~~~-~~~~~~~~~~~ii~~~~~ 141 (183)
T 3c85_A 97 WERILDTGHVKLVLLAM-----PHHQGNQTAL-EQLQRRNYKGQIAAIAEY 141 (183)
T ss_dssp HHTBCSCCCCCEEEECC-----SSHHHHHHHH-HHHHHTTCCSEEEEEESS
T ss_pred HHhccCCCCCCEEEEeC-----CChHHHHHHH-HHHHHHCCCCEEEEEECC
Confidence 1 235689887632 2122 22333 355666766 66555544
No 355
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=73.53 E-value=1.8 Score=44.34 Aligned_cols=62 Identities=26% Similarity=0.480 Sum_probs=51.9
Q ss_pred CCCceeEEEEEEEEEecccccccceecc-----------------cceeeeccCCcccccceeeeeeccccccceecccC
Q 004178 400 SNGCLSFISYSVSLVIEGETMKELLESR-----------------EEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKEL 462 (770)
Q Consensus 400 ~~g~~~~i~y~~~l~~~~~~~~~l~e~~-----------------~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l 462 (770)
..|+.+.|.|+..+ +|+ ++.+. .-+.|-+|.|.+.+-++..+..|.+|+...|. +
T Consensus 3 ~~Gd~V~v~Y~g~l--dG~----vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~--I 74 (231)
T 3prb_A 3 EKGKMVKISYDGYV--DGK----LFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVV--L 74 (231)
T ss_dssp CTTCEEEEEEEEEE--TTE----EEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEE--E
T ss_pred CCCCEEEEEEEEEE--CCE----EEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEE--e
Confidence 57999999999999 663 44422 45999999999999999999999999999888 7
Q ss_pred Cchhhhh
Q 004178 463 PPQELIL 469 (770)
Q Consensus 463 ~p~elfl 469 (770)
||...+-
T Consensus 75 ppe~AYG 81 (231)
T 3prb_A 75 PPEKAFG 81 (231)
T ss_dssp CGGGTTC
T ss_pred CcHHhcC
Confidence 7776554
No 356
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=73.36 E-value=1.6 Score=42.71 Aligned_cols=63 Identities=16% Similarity=0.314 Sum_probs=51.5
Q ss_pred CCCCceeEEEEEEEEEecccccccceecc---cceeeeccCCcccccceeeeeeccccccceecccCCchhhh
Q 004178 399 PSNGCLSFISYSVSLVIEGETMKELLESR---EEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELI 468 (770)
Q Consensus 399 ~~~g~~~~i~y~~~l~~~~~~~~~l~e~~---~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elf 468 (770)
...|+.+.|.|+..+. +| .++++. +.++|.+|.|.+.+-++..+..|.+|+...|. ++|.+.+
T Consensus 3 i~~gd~V~v~Y~g~~~-dG----~~fdss~~~~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~--ippe~aY 68 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTE-DG----VLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVA--VGANDAY 68 (171)
T ss_dssp CCTTEEEEEEEEEEET-TS----CEEEECCSSSCEEEETTSCSSCSHHHHHHTTCCTTCEEEEE--EETTTSS
T ss_pred CCCCCEEEEEEEEEEC-CC----CEEeeccCCcCEEEEECCCCcchHHHHHHcCCCCCCEEEEE--ECcHHhc
Confidence 3689999999999863 44 355533 57999999999999999999999999999887 6666544
No 357
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=73.36 E-value=3.2 Score=43.33 Aligned_cols=92 Identities=21% Similarity=0.383 Sum_probs=63.7
Q ss_pred CCc-cCCCCceeEEEEEEEEEecccccccceecccceeeeccCCc---ccccceeeeeeccccccceecccCCchhhhhh
Q 004178 395 SGI-YPSNGCLSFISYSVSLVIEGETMKELLESREEFEFEMGTGA---VIPQVEVVTAQMSVGQSACFCKELPPQELILA 470 (770)
Q Consensus 395 ~~~-~~~~g~~~~i~y~~~l~~~~~~~~~l~e~~~ef~fe~g~~~---~~~~~~~~~~~~sv~q~~~~~~~l~p~elfla 470 (770)
.|. .|..|..|-|.|...+ +| .++++ ..|+|.+|.|. +++-++..+..|.+|..+.|. +||.-.+-.
T Consensus 179 ~G~~~~~~gd~V~i~y~g~~--dG----~~fd~-~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~--ip~~~~yG~ 249 (280)
T 1q1c_A 179 EGYAKPNEGAIVEVALEGYY--KD----KLFDQ-RELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVY--LKPSYAFGS 249 (280)
T ss_dssp SCSCCCCTTCEEEEEEEEEE--TT----EEEEE-EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEE--ECGGGTTTT
T ss_pred cccccccCCceEEEEEEEEe--CC----EEEec-CCeEEEecCCcccccchhHHHHHhCCCCCcEEEEE--EChhHcCCc
Confidence 455 6899999999999987 55 35555 58999999987 489999999999999999887 555433322
Q ss_pred ccCCccchhhcccccccccceeeeecccCC
Q 004178 471 AADDSARTFSLLSSRACCLEYHITLLRVTE 500 (770)
Q Consensus 471 a~~~~~~diS~Ls~~~~~Ley~i~lL~v~e 500 (770)
... . .+ .++...- +.|.++++.+..
T Consensus 250 ~~~-~--~~-~IP~~~~-l~f~V~L~~i~~ 274 (280)
T 1q1c_A 250 VGK-E--KF-QIPPNAE-LKYELHLKSFEK 274 (280)
T ss_dssp TCB-G--GG-TBCTTCC-EEEEEEEEEEEC
T ss_pred CCC-c--cC-ccCCCCe-EEEEEEEEEEeC
Confidence 110 0 00 0122222 778888876654
No 358
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=73.21 E-value=2 Score=41.39 Aligned_cols=60 Identities=22% Similarity=0.393 Sum_probs=51.1
Q ss_pred CCCceeEEEEEEEEEecccccccceecccceeeeccCCcccccceeeeeeccccccceecccCCchhhh
Q 004178 400 SNGCLSFISYSVSLVIEGETMKELLESREEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELI 468 (770)
Q Consensus 400 ~~g~~~~i~y~~~l~~~~~~~~~l~e~~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elf 468 (770)
..|+.+.|.|+.. .+| .++++.. +.|.+|.|.+.+-++..+..|.+|+...|. ++|.+.+
T Consensus 4 ~~gd~V~v~Y~g~--~dG----~~fdss~-~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~--ipp~~aY 63 (158)
T 3cgm_A 4 GQDKVVTIRYTLQ--VEG----EVLDQGE-LSYLHGHRNLIPGLEEALEGREEGEAFQAH--VPAEKAY 63 (158)
T ss_dssp CTTEEEEEEEEEE--ETT----EEEEEEE-EEEETTSSSSCHHHHHHHTTCBTTCEEEEE--ECGGGTT
T ss_pred CCCCEEEEEEEEE--ECC----EEEEeeE-EEEEECCCCcChHHHHHHcCCCCCCEEEEE--ECcHHHc
Confidence 6899999999998 555 3566544 999999999999999999999999999988 7777654
No 359
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=72.91 E-value=2.2 Score=40.70 Aligned_cols=64 Identities=25% Similarity=0.350 Sum_probs=52.3
Q ss_pred CCCCceeEEEEEEEEEecccccccceecc---cceeeeccCCcccccceeeeeeccccccceecccCCchhhh
Q 004178 399 PSNGCLSFISYSVSLVIEGETMKELLESR---EEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELI 468 (770)
Q Consensus 399 ~~~g~~~~i~y~~~l~~~~~~~~~l~e~~---~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elf 468 (770)
+..|+.+.|.|+..+.-+| .++++. ..++|.+|.|.+.+-++..+..|.+|+...|. ++|.+.+
T Consensus 7 i~~gd~V~v~Y~g~~~~dG----~~fdss~~~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~--ipp~~aY 73 (151)
T 2kr7_A 7 ESIKQAALIEYEVREQGSS----IVLDSNISKEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVV--IAPEEAY 73 (151)
T ss_dssp TTSCCEEEEEEEEEESSCS----CEEEESTTTCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEE--ECGGGTT
T ss_pred CCCCCEEEEEEEEEECCCC----CEEEeCCCCcCEEEEECCCCccHHHHHHHcCCCCCCEEEEE--EecHHHc
Confidence 4789999999999864233 355533 57999999999999999999999999999988 7777654
No 360
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=72.79 E-value=2.4 Score=42.39 Aligned_cols=63 Identities=16% Similarity=0.310 Sum_probs=52.1
Q ss_pred CCCCceeEEEEEEEEEecccccccceecc---cceeeeccCCcccccceeeeeeccccccceecccCCchhhh
Q 004178 399 PSNGCLSFISYSVSLVIEGETMKELLESR---EEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELI 468 (770)
Q Consensus 399 ~~~g~~~~i~y~~~l~~~~~~~~~l~e~~---~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elf 468 (770)
+..|+.|.|.|++.+ .+| .++++. +.|+|.+|.+.+++-++..+..|.+|+...|. |||.+.+
T Consensus 3 i~~gd~V~v~Y~g~~-~dG----~~fdss~~~~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~--Ippe~aY 68 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRT-EDG----VLVDESPVSAPLDYLHGHGSLISGLETALEGHEVGDKFDVA--VGANDAY 68 (196)
T ss_dssp CCSSCEEEEEEEEEE-TTT----EEEEECCTTSCCEEESSSSSSCHHHHHHHSSSCTTCEEEEE--CSTTTTS
T ss_pred CCCCCEEEEEEEEEE-CCC----CEEEecCCCCCEEEEECCCCcchHHHHHHcCCCCCCEEEEE--eCcHHhc
Confidence 478999999999996 343 355533 57999999999999999999999999999988 7777654
No 361
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=71.41 E-value=46 Score=35.59 Aligned_cols=120 Identities=17% Similarity=0.150 Sum_probs=73.6
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhh------hccc--ccCCCC---CCCccEEEE
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKL------SKKL--DAAVPC---TDVKSAVLF 599 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~------s~~~--~~l~pr---~~~~~Vef~ 599 (770)
+...|+-+|||.=.....|.....+..+++=||. |+.++.-++.+.... .... +..... -...+..++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 4679999999987777777654212367888885 556655444443210 0000 000000 013467888
Q ss_pred ECCccccC----------CCCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEec
Q 004178 600 DGSITVFD----------SRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTP 651 (770)
Q Consensus 600 ~GDaedlp----------~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTP 651 (770)
-.|+.+.. +....-=++++-+++.+++++....+++.+.+...+|.+++..|
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~~~~i~yE~ 230 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFERAMFINYEQ 230 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSSEEEEEEEE
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCCceEEEEec
Confidence 88986631 11233447888889999999999999988888887774444333
No 362
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=70.98 E-value=4 Score=43.74 Aligned_cols=93 Identities=20% Similarity=0.398 Sum_probs=66.5
Q ss_pred CC-ccCCCCceeEEEEEEEEEeccccccccee-c----ccceeeeccCCcccccceeeeeeccccccceecccCCchhhh
Q 004178 395 SG-IYPSNGCLSFISYSVSLVIEGETMKELLE-S----REEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELI 468 (770)
Q Consensus 395 ~~-~~~~~g~~~~i~y~~~l~~~~~~~~~l~e-~----~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elf 468 (770)
.| -.|..|+.+-|.|...|. +|+ +++ + .+.|+|.+|.|.+++-++..+..|.+|....+. +||...+
T Consensus 255 ~g~~~~~~gd~V~v~y~g~l~-dG~----~fd~~~~~~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v~--ip~~~aY 327 (356)
T 3jxv_A 255 EGYERPNEGAVVTVKITGKLQ-DGT----VFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVT--IPPEYAY 327 (356)
T ss_dssp BSSCCCCTTCEEEEEEEEEES-SSC----EEEEESCTTSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEEE--ECGGGTT
T ss_pred cccCCCCCCCEEEEEEEEEEC-CCC----EEeeccccCCcCEEEEECCCccchHHHHHHhCCCCCCEEEEE--EChHHcc
Confidence 44 589999999999999984 432 333 2 466999999999999999999999999999988 7777665
Q ss_pred hhccCCccchhhcccccccccceeeeeccc
Q 004178 469 LAAADDSARTFSLLSSRACCLEYHITLLRV 498 (770)
Q Consensus 469 laa~~~~~~diS~Ls~~~~~Ley~i~lL~v 498 (770)
-....... ..++..+- |.|.+.++.+
T Consensus 328 G~~~~~~~---~~Ip~~~~-l~f~vel~~~ 353 (356)
T 3jxv_A 328 GSTESKQD---AIVPPNST-VIYEVELVSF 353 (356)
T ss_dssp TTSCEESS---SEECTTCC-EEEEEEEEEE
T ss_pred CCCCcCCC---CcCCcCCe-EEEEEEEEEE
Confidence 43321110 11223333 6777777654
No 363
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=69.51 E-value=1.4 Score=41.98 Aligned_cols=63 Identities=24% Similarity=0.435 Sum_probs=51.1
Q ss_pred CCCCceeEEEEEEEEEecccccccceecc-----------------cceeeeccCCcccccceeeeeeccccccceeccc
Q 004178 399 PSNGCLSFISYSVSLVIEGETMKELLESR-----------------EEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKE 461 (770)
Q Consensus 399 ~~~g~~~~i~y~~~l~~~~~~~~~l~e~~-----------------~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~ 461 (770)
+..|+.+.|.|+..+ .+|+ ++.+. +-++|.+|.|.+.+-++..+..|.+|+...|.
T Consensus 2 i~~gd~V~v~Y~g~~-~dG~----~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~-- 74 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKL-ESGD----VFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVK-- 74 (151)
T ss_dssp CCTTCEEEECCEECC-TTSC----CCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEE--
T ss_pred CCCCCEEEEEEEEEE-CCCC----EEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEE--
Confidence 478999999999996 3443 34422 46899999999999999999999999999988
Q ss_pred CCchhhh
Q 004178 462 LPPQELI 468 (770)
Q Consensus 462 l~p~elf 468 (770)
+||.+.+
T Consensus 75 ipp~~aY 81 (151)
T 1ix5_A 75 IPAEKAY 81 (151)
T ss_dssp ECTTTSS
T ss_pred ECcHHHC
Confidence 7776644
No 364
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=68.49 E-value=25 Score=34.10 Aligned_cols=101 Identities=15% Similarity=0.093 Sum_probs=60.3
Q ss_pred EEEEEcCcc-ch-HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC---
Q 004178 534 TLVDFGCGS-GS-LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS--- 608 (770)
Q Consensus 534 rVLDIGCGt-G~-ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~--- 608 (770)
+|+=+|+|. |. ++..|.+.+ ..|+.+|.+++.++...+. ..+.++.+|+.+...
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g---~~v~vid~~~~~~~~l~~~------------------~~~~~i~gd~~~~~~l~~ 60 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRK---YGVVIINKDRELCEEFAKK------------------LKATIIHGDGSHKEILRD 60 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTT---CCEEEEESCHHHHHHHHHH------------------SSSEEEESCTTSHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHhCC---CeEEEEECCHHHHHHHHHH------------------cCCeEEEcCCCCHHHHHh
Confidence 467788753 22 334444555 7899999999887765432 145678888876321
Q ss_pred -CCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHh
Q 004178 609 -RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQ 660 (770)
Q Consensus 609 -~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~ 660 (770)
.....|+|++.- +++....+...+.+.+.|. .++.-+.+.++...+.
T Consensus 61 a~i~~ad~vi~~~-----~~d~~n~~~~~~a~~~~~~~~iia~~~~~~~~~~l~ 109 (218)
T 3l4b_C 61 AEVSKNDVVVILT-----PRDEVNLFIAQLVMKDFGVKRVVSLVNDPGNMEIFK 109 (218)
T ss_dssp HTCCTTCEEEECC-----SCHHHHHHHHHHHHHTSCCCEEEECCCSGGGHHHHH
T ss_pred cCcccCCEEEEec-----CCcHHHHHHHHHHHHHcCCCeEEEEEeCcchHHHHH
Confidence 235789887642 3344444444455655565 6666555555555544
No 365
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=67.67 E-value=4.6 Score=41.04 Aligned_cols=89 Identities=20% Similarity=0.300 Sum_probs=65.2
Q ss_pred CCccCCCCceeEEEEEEEEEeccccccccee-cccceeeeccCCcccccceeeeeeccccccceecccCCchhhhhhccC
Q 004178 395 SGIYPSNGCLSFISYSVSLVIEGETMKELLE-SREEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELILAAAD 473 (770)
Q Consensus 395 ~~~~~~~g~~~~i~y~~~l~~~~~~~~~l~e-~~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elflaa~~ 473 (770)
+|-.|..|+.|.|.|...|. +| .++. +...+.|.+| .+++-++..+..|.+|....|. +||...+-....
T Consensus 128 ~G~~p~~gd~V~V~Y~g~l~-dG----~vfDss~~P~~f~lG--~vI~G~eeaL~gMk~Gek~~v~--IPp~lAYG~~g~ 198 (219)
T 3oe2_A 128 TGPKPDANGRVEVRYVGRLP-DG----KIFDQSTQPQWFRLD--SVISGWTSALQNMPTGAKWRLV--IPSDQAYGAEGA 198 (219)
T ss_dssp CSCCCCTTSEEEEEEEEECT-TS----CEEEECSSCEEEEGG--GSCHHHHHHHTTCCTTCEEEEE--ECGGGTTTTTCB
T ss_pred CCccCCCCCEEEEEEEEEEC-CC----CEeeccCCcEEEEec--chhHHHHHHHhCCCCCCEEEEE--ECchhcCCCCCC
Confidence 57789999999999999975 44 2444 4567888887 6899999999999999999888 887765544322
Q ss_pred Cccchhhcccccccccceeeeeccc
Q 004178 474 DSARTFSLLSSRACCLEYHITLLRV 498 (770)
Q Consensus 474 ~~~~diS~Ls~~~~~Ley~i~lL~v 498 (770)
.. .++..+. |.|.+.++.+
T Consensus 199 ~~-----~IPpnst-LvFeVeLl~I 217 (219)
T 3oe2_A 199 GD-----LIDPFTP-LVFEIELIAV 217 (219)
T ss_dssp TT-----TBCTTCC-EEEEEEEEEE
T ss_pred CC-----CCCCCCe-EEEEEEEEEE
Confidence 11 1333444 7777777754
No 366
>1di2_A XLRBPA, double stranded RNA binding protein A; protein-RNA complex, protein-RNA interactions, RNA-bining protein; 1.90A {Xenopus laevis} SCOP: d.50.1.1
Probab=66.33 E-value=4.8 Score=33.06 Aligned_cols=68 Identities=13% Similarity=0.111 Sum_probs=46.9
Q ss_pred ChhhHHHhhhhhcccCcceeecccCCccccccchhhhhhhhhcccccccccccCCCcccCCCceeeEEEEeeccCCcccc
Q 004178 212 FPREMLFMFCRQHWLSEPVFSTCSNSLKESSESSRFYEKSAALESAETGKECTSGGGTAASDNVRCEVKIFSKSRDPILE 291 (770)
Q Consensus 212 ~p~~~l~~fc~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 291 (770)
.|...|-.+|..+.+..|.|.... .. |......|.|+|.|-.+ +
T Consensus 1 ~p~s~LqE~~q~~~~~~p~Y~~~~----------------------------~~--Gp~h~~~F~~~v~v~~~----~-- 44 (69)
T 1di2_A 1 MPVGSLQELAVQKGWRLPEYTVAQ----------------------------ES--GPPHKREFTITCRVETF----V-- 44 (69)
T ss_dssp CHHHHHHHHHHHHTCCCCEEEEEE----------------------------EE--SCGGGCEEEEEEEETTE----E--
T ss_pred CCHHHHHHHHHHcCCCCCEEEEEE----------------------------eE--CCCCCCeEEEEEEECCE----E--
Confidence 488999999999999999998750 01 11122349999998531 1
Q ss_pred cCchhhhhhhhhhHhhhhhHHHHHHH
Q 004178 292 CSPKEFYKKQNESIENASLKVLSWLN 317 (770)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~l~~l~~~~ 317 (770)
. ...=+..-+|=|+||..+|..|.
T Consensus 45 ~--~G~G~sKK~Aeq~AA~~al~~L~ 68 (69)
T 1di2_A 45 E--TGSGTSKQVAKRVAAEKLLTKFK 68 (69)
T ss_dssp E--EEEESSHHHHHHHHHHHHHHHHH
T ss_pred E--EeecCCHHHHHHHHHHHHHHHHh
Confidence 1 22234556799999999998774
No 367
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=66.17 E-value=17 Score=39.84 Aligned_cols=102 Identities=16% Similarity=0.148 Sum_probs=65.5
Q ss_pred CCEEEEEcCcc-chH-HHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC-
Q 004178 532 ATTLVDFGCGS-GSL-LDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS- 608 (770)
Q Consensus 532 ~~rVLDIGCGt-G~l-l~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~- 608 (770)
..+|+=+|+|. |.. +..|.+.+ ..|+++|.+++.++.+++ ..+.++.||+.+...
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g---~~vvvId~d~~~v~~~~~-------------------~g~~vi~GDat~~~~L 61 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSG---VKMVVLDHDPDHIETLRK-------------------FGMKVFYGDATRMDLL 61 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT---CCEEEEECCHHHHHHHHH-------------------TTCCCEESCTTCHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHh-------------------CCCeEEEcCCCCHHHH
Confidence 45788999874 433 33444555 789999999999988764 135578889876432
Q ss_pred ---CCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHh
Q 004178 609 ---RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQ 660 (770)
Q Consensus 609 ---~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~ 660 (770)
.....|+|++.- +++......-...+.+.|. .+++-+.+.+....+.
T Consensus 62 ~~agi~~A~~viv~~-----~~~~~n~~i~~~ar~~~p~~~Iiara~~~~~~~~L~ 112 (413)
T 3l9w_A 62 ESAGAAKAEVLINAI-----DDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLR 112 (413)
T ss_dssp HHTTTTTCSEEEECC-----SSHHHHHHHHHHHHHHCTTCEEEEEESSHHHHHHHH
T ss_pred HhcCCCccCEEEECC-----CChHHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHH
Confidence 235688876543 2344444444577788898 6776666655444443
No 368
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=64.11 E-value=6.9 Score=40.38 Aligned_cols=47 Identities=23% Similarity=0.220 Sum_probs=37.9
Q ss_pred HHhhcCCCCEEEEEcCc-cchHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 525 QHIKESCATTLVDFGCG-SGSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 525 ~~L~~~~~~rVLDIGCG-tG~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
+..+..++++||-+|+| .|.++..+++..+ .+|+++| +++-++.+++
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~-~~~~~~~~~~ 183 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVS-ASLSQALAAK 183 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEC-SSCCHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEE-ChhhHHHHHH
Confidence 55566788999999997 4888888887654 6999999 9888888865
No 369
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=63.96 E-value=52 Score=29.96 Aligned_cols=105 Identities=7% Similarity=0.068 Sum_probs=59.5
Q ss_pred CCEEEEEcCcc-ch-HHHHHhcCCCCCceEEEEeCC-hHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC
Q 004178 532 ATTLVDFGCGS-GS-LLDSLLDYPTALEKIVGVDIS-QKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS 608 (770)
Q Consensus 532 ~~rVLDIGCGt-G~-ll~~LAk~ggp~~~VvGVDIS-eemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~ 608 (770)
..+|+=+|+|. |. ++..|.+.+ .+|+.+|.+ ++.++...+.. ...+.++.||..+...
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g---~~V~vid~~~~~~~~~~~~~~----------------~~~~~~i~gd~~~~~~ 63 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRG---QNVTVISNLPEDDIKQLEQRL----------------GDNADVIPGDSNDSSV 63 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT---CCEEEEECCCHHHHHHHHHHH----------------CTTCEEEESCTTSHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC---CCEEEEECCChHHHHHHHHhh----------------cCCCeEEEcCCCCHHH
Confidence 35788888763 22 233444555 789999997 45444443322 1247788899765321
Q ss_pred ----CCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHh
Q 004178 609 ----RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQ 660 (770)
Q Consensus 609 ----~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~ 660 (770)
.....|+|++.- +++..........+.+.|. .++.-..+.++...+.
T Consensus 64 l~~a~i~~ad~vi~~~-----~~d~~n~~~~~~a~~~~~~~~ii~~~~~~~~~~~l~ 115 (153)
T 1id1_A 64 LKKAGIDRCRAILALS-----DNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIK 115 (153)
T ss_dssp HHHHTTTTCSEEEECS-----SCHHHHHHHHHHHHHHTSSSCEEEECSSGGGHHHHH
T ss_pred HHHcChhhCCEEEEec-----CChHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH
Confidence 245788887653 2234444444566677665 5555555544444443
No 370
>3adj_A F21M12.9 protein; HYL1, miRNA processing, RNA binding protein, gene regulation; 3.00A {Arabidopsis thaliana} PDB: 2l2m_A
Probab=63.87 E-value=5.1 Score=33.68 Aligned_cols=68 Identities=10% Similarity=0.131 Sum_probs=46.9
Q ss_pred hhhHHHhhhhhcccCcceeecccCCccccccchhhhhhhhhcccccccccccCCCcccCCCceeeEEEEeeccCCccccc
Q 004178 213 PREMLFMFCRQHWLSEPVFSTCSNSLKESSESSRFYEKSAALESAETGKECTSGGGTAASDNVRCEVKIFSKSRDPILEC 292 (770)
Q Consensus 213 p~~~l~~fc~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ 292 (770)
|+..|-.+|..+.+..|.|.... .. |......|.|+|.|-.+ + +
T Consensus 6 ~Kt~LqE~~q~~~~~~p~Y~~~~----------------------------~~--Gp~h~~~F~~~v~v~g~----~--~ 49 (76)
T 3adj_A 6 CKNLLQEYAQKMNYAIPLYQCQK----------------------------VE--TLGRVTQFTCTVEIGGI----K--Y 49 (76)
T ss_dssp HHHHHHHHHHTTTCCCCEEEEEE----------------------------EE--CSSSCEEEEEEEEETTE----E--E
T ss_pred HHHHHHHHHHHhCCCCCeEEEee----------------------------cc--CCCCCCcEEEEEEECCE----E--E
Confidence 68899999999999999997650 01 11122339999998532 1 1
Q ss_pred CchhhhhhhhhhHhhhhhHHHHHHH
Q 004178 293 SPKEFYKKQNESIENASLKVLSWLN 317 (770)
Q Consensus 293 ~~~~~~~~~~~~~~~~~l~~l~~~~ 317 (770)
....-+..-+|=|+||.++|..|.
T Consensus 50 -~~G~G~sKK~Aeq~AA~~al~~L~ 73 (76)
T 3adj_A 50 -TGAATRTKKDAEISAGRTALLAIQ 73 (76)
T ss_dssp -ECCCBSSHHHHHHHHHHHHHHHHH
T ss_pred -EEeccCCHHHHHHHHHHHHHHHHh
Confidence 122335566899999999999885
No 371
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=63.56 E-value=7.1 Score=44.98 Aligned_cols=138 Identities=12% Similarity=0.016 Sum_probs=73.2
Q ss_pred hHHHHHHHHHHHH-----hh--cCCCCEEEEEcCccchHHHHHhcCC-----------CCCceEEEEeC---ChHHHHHH
Q 004178 514 PLSKQRVEYALQH-----IK--ESCATTLVDFGCGSGSLLDSLLDYP-----------TALEKIVGVDI---SQKSLSRA 572 (770)
Q Consensus 514 PL~~qR~e~Il~~-----L~--~~~~~rVLDIGCGtG~ll~~LAk~g-----------gp~~~VvGVDI---SeemLe~A 572 (770)
.+.+.|+-|+... .. ..+.-+|||+|-|+|..+....+.. ...-++++++. +.+.+..+
T Consensus 42 ~~~e~~~vf~~~~~l~~~~~~~~~~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~ 121 (676)
T 3ps9_A 42 GLEETRYVFLGGNQLEVRFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALA 121 (676)
T ss_dssp HHHHHHHHTTGGGTHHHHGGGCSSSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHH
T ss_pred HHHhhHhhhhccCChhHHHHhCCCCceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHH
Confidence 3555566555332 12 1234589999999999876554321 11256999998 77777644
Q ss_pred HHHHh-------hhhhcccccCCC------CCCCccEEEEECCccccCCC-----CCCccEEEeccccccCChhH-HHHH
Q 004178 573 AKIIH-------SKLSKKLDAAVP------CTDVKSAVLFDGSITVFDSR-----LHGFDIGTCLEVIEHMEEDE-ASQF 633 (770)
Q Consensus 573 rkrL~-------~~~s~~~~~l~p------r~~~~~Vef~~GDaedlp~~-----d~sFDlVVc~eVLEHL~~d~-~~~f 633 (770)
-.... +........+.. ..+.-++++..||+.+.-.. ...||+|+.-..-....++- ...+
T Consensus 122 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~ 201 (676)
T 3ps9_A 122 HQHWPELAPWAEQLQAQWPMPLPGCHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNL 201 (676)
T ss_dssp HTTCGGGHHHHHHHHHHCCCCCSEEEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHH
T ss_pred HHhChhhHHHHHHHHHhCcccCCCceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHH
Confidence 33110 011000000000 01123567888997653221 36799997754322222121 1345
Q ss_pred HHHHHHcccCCEEEEEec
Q 004178 634 GNIVLSSFRPRILIVSTP 651 (770)
Q Consensus 634 leeI~rvLKPG~LIISTP 651 (770)
+..++++++||..+.+..
T Consensus 202 ~~~l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 202 FNAMARLARPGGTLATFT 219 (676)
T ss_dssp HHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHhCCCCEEEecc
Confidence 567999999995544433
No 372
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=62.80 E-value=7.4 Score=41.78 Aligned_cols=49 Identities=10% Similarity=-0.001 Sum_probs=38.8
Q ss_pred HHhhcCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 525 QHIKESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 525 ~~L~~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
+..+..++++||-+|||. |.++..+++..+ ..+|+++|.+++.++.+++
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~ 228 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLKLLSD 228 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHHT
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH
Confidence 445667789999999986 888888887543 1389999999998888754
No 373
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=62.78 E-value=10 Score=43.84 Aligned_cols=122 Identities=11% Similarity=-0.011 Sum_probs=65.8
Q ss_pred CCCEEEEEcCccchHHHHHhcCC-----------CCCceEEEEeC---ChHHHHHHHHHHh-------hhhhcccccC--
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYP-----------TALEKIVGVDI---SQKSLSRAAKIIH-------SKLSKKLDAA-- 587 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~g-----------gp~~~VvGVDI---SeemLe~ArkrL~-------~~~s~~~~~l-- 587 (770)
+.-+|+|+|.|+|.....+.+.. ....+++.++. +.+-+..|-+... +........+
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 45699999999999877654421 11257999998 5555554322100 0111100000
Q ss_pred ----CCCCCCccEEEEECCccccCCC-----CCCccEEEeccccccCChhH-HHHHHHHHHHcccCCEEEEEecC
Q 004178 588 ----VPCTDVKSAVLFDGSITVFDSR-----LHGFDIGTCLEVIEHMEEDE-ASQFGNIVLSSFRPRILIVSTPN 652 (770)
Q Consensus 588 ----~pr~~~~~Vef~~GDaedlp~~-----d~sFDlVVc~eVLEHL~~d~-~~~fleeI~rvLKPG~LIISTPN 652 (770)
.-..+.-+++++.||+.+.-.. ...+|+++.-..--.-.++- ...++..++++++||..+.+...
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~ 212 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFTA 212 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESCC
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEeccC
Confidence 0001223678899998653221 36799997754322221111 13455579999999955544433
No 374
>2l2n_A Hyponastic leave 1; DSRBD, miRNA, RNA binding protein, plant protein; NMR {Arabidopsis thaliana}
Probab=62.38 E-value=7.7 Score=34.75 Aligned_cols=70 Identities=13% Similarity=0.118 Sum_probs=48.1
Q ss_pred CChhhHHHhhhhhcccCcceeecccCCccccccchhhhhhhhhcccccccccccCCCcccCCCceeeEEEEeeccCCccc
Q 004178 211 SFPREMLFMFCRQHWLSEPVFSTCSNSLKESSESSRFYEKSAALESAETGKECTSGGGTAASDNVRCEVKIFSKSRDPIL 290 (770)
Q Consensus 211 ~~p~~~l~~fc~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 290 (770)
.-|+..|-.+|..+.+..|.|... .. |......|.|+|.|-.+
T Consensus 17 ~d~Kt~LqE~~Q~~~~~~P~Y~~~-----------------------------~~--Gp~H~~~F~~~V~v~g~------ 59 (103)
T 2l2n_A 17 YVFKSRLQEYAQKYKLPTPVYEIV-----------------------------KE--GPSHKSLFQSTVILDGV------ 59 (103)
T ss_dssp --CTTHHHHHHHHTTCCCCEEEEE-----------------------------EE--SCSSSCEEEEEEEETTE------
T ss_pred CCHHHHHHHHHHHcCCCCCeEEEE-----------------------------eE--cCCCCCeEEEEEEECCE------
Confidence 357889999999999999998776 01 22223349999988542
Q ss_pred ccCchhhhhhhhhhHhhhhhHHHHHHH
Q 004178 291 ECSPKEFYKKQNESIENASLKVLSWLN 317 (770)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~l~~l~~~~ 317 (770)
.+....-++...+|=|+||.++|.+|.
T Consensus 60 ~~~~G~G~~SKK~Aeq~AA~~AL~~L~ 86 (103)
T 2l2n_A 60 RYNSLPGFFNRKAAEQSAAEVALRELA 86 (103)
T ss_dssp EEECCSCBSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 122222225667899999999999986
No 375
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=62.34 E-value=39 Score=35.10 Aligned_cols=101 Identities=14% Similarity=0.059 Sum_probs=64.1
Q ss_pred CCEEEEEcCccchHHHHHhcCCC-CCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC--
Q 004178 532 ATTLVDFGCGSGSLLDSLLDYPT-ALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS-- 608 (770)
Q Consensus 532 ~~rVLDIGCGtG~ll~~LAk~gg-p~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~-- 608 (770)
.++|+=+|+| ..+..+++... ... |+.+|.+++.++ +++ ..+.++.||+.+...
T Consensus 115 ~~~viI~G~G--~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-------------------~~~~~i~gd~~~~~~L~ 171 (336)
T 1lnq_A 115 SRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKK-VLR-------------------SGANFVHGDPTRVSDLE 171 (336)
T ss_dssp -CEEEEESCC--HHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-------------------TTCEEEESCTTSHHHHH
T ss_pred cCCEEEECCc--HHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-------------------CCcEEEEeCCCCHHHHH
Confidence 4689988874 55555554321 115 999999998887 543 247889999876432
Q ss_pred --CCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHh
Q 004178 609 --RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQ 660 (770)
Q Consensus 609 --~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~ 660 (770)
.....|.|++.- +++....+.-...+.+.|. .++.-..+.++...+.
T Consensus 172 ~a~i~~a~~vi~~~-----~~d~~n~~~~~~ar~~~~~~~iiar~~~~~~~~~l~ 221 (336)
T 1lnq_A 172 KANVRGARAVIVDL-----ESDSETIHCILGIRKIDESVRIIAEAERYENIEQLR 221 (336)
T ss_dssp HTCSTTEEEEEECC-----SSHHHHHHHHHHHHTTCTTSEEEEECSSGGGHHHHH
T ss_pred hcChhhccEEEEcC-----CccHHHHHHHHHHHHHCCCCeEEEEECCHHHHHHHH
Confidence 245788887642 3344444444567778887 7777666665555444
No 376
>3adl_A RISC-loading complex subunit tarbp2; TRBP2, miRNA processing, gene regulation-RNA complex; 2.20A {Homo sapiens}
Probab=62.09 E-value=7.8 Score=33.77 Aligned_cols=75 Identities=19% Similarity=0.093 Sum_probs=53.1
Q ss_pred ccccCCCChhhHHHhhhhhcccCcceeecccCCccccccchhhhhhhhhcccccccccccCCCcccCCCceeeEEEEeec
Q 004178 205 RTNWRGSFPREMLFMFCRQHWLSEPVFSTCSNSLKESSESSRFYEKSAALESAETGKECTSGGGTAASDNVRCEVKIFSK 284 (770)
Q Consensus 205 ~~~w~g~~p~~~l~~fc~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 284 (770)
--.|...-|+..|-.+|....+..|.|.... .. |......|.|+|.|-.+
T Consensus 9 ~~~~~~~d~Ks~LqE~~Q~~~~~~P~Y~~~~----------------------------~~--Gp~H~~~F~~~v~v~g~ 58 (88)
T 3adl_A 9 GLVPRGSHEVGALQELVVQKGWRLPEYTVTQ----------------------------ES--GPAHRKEFTMTCRVERF 58 (88)
T ss_dssp CCCCTTCCHHHHHHHHHHHTTCCCCEEEEEE----------------------------EE--SCTTSCEEEEEEEETTE
T ss_pred CCCCCCCCHHHHHHHHHHHcCCCCCEEEEEE----------------------------eE--CCCCCCeEEEEEEECCE
Confidence 3467778899999999999999999998750 01 11223349999998531
Q ss_pred cCCcccccCchhhhhhhhhhHhhhhhHHHHHHH
Q 004178 285 SRDPILECSPKEFYKKQNESIENASLKVLSWLN 317 (770)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 317 (770)
+ . ...=+..-+|=|+||.++|..|.
T Consensus 59 ----~--~--~G~G~SKK~Aeq~AA~~AL~~L~ 83 (88)
T 3adl_A 59 ----I--E--IGSGTSKKLAKRNAAAKMLLRVH 83 (88)
T ss_dssp ----E--E--EEEESSHHHHHHHHHHHHHHHHH
T ss_pred ----E--E--EEeeCCHHHHHHHHHHHHHHHHH
Confidence 1 1 22234445899999999999885
No 377
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=61.65 E-value=8.3 Score=39.18 Aligned_cols=66 Identities=20% Similarity=0.374 Sum_probs=51.8
Q ss_pred CCccCCCCceeEEEEEEEEEecccccccceecc----cceeeeccCCcccccceeeeeeccccccceecccCCchhhhh
Q 004178 395 SGIYPSNGCLSFISYSVSLVIEGETMKELLESR----EEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELIL 469 (770)
Q Consensus 395 ~~~~~~~g~~~~i~y~~~l~~~~~~~~~l~e~~----~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elfl 469 (770)
+|-.|..|+.|.|.|...|. +|+ ++++. ..++|.+ |.+++-++..+..|.+|....|. +||..-+-
T Consensus 132 ~G~~p~~gD~V~V~Y~g~l~-dG~----vfdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~--IP~~laYG 201 (224)
T 1q6h_A 132 KGEAPKDSDTVVVNYKGTLI-DGK----EFDNSYTRGEPLSFRL--DGVIPGWTEGLKNIKKGGKIKLV--IPPELAYG 201 (224)
T ss_dssp SSCCCCTTCEEEEEEEEEET-TSC----EEEEGGGGTSCEEEEG--GGSCHHHHHHGGGSCTTCEEEEE--ECGGGTTT
T ss_pred cCccccCCCEEEEEEEEEeC-CCC----EEeeccccCCCEEEEc--CCcchhHHHHHcCCCCCCEEEEE--ECchhhcC
Confidence 57789999999999999975 443 44422 5677877 57999999999999999999886 77665443
No 378
>1uil_A Double-stranded RNA-binding motif; structural genomics, DSRM, riken structural genomics/proteomics initiative, RSGI RNA binding protein; NMR {Mus musculus} SCOP: d.50.1.1 PDB: 2rs7_A
Probab=61.05 E-value=5.6 Score=36.33 Aligned_cols=87 Identities=11% Similarity=0.182 Sum_probs=57.7
Q ss_pred CCcceeeccccCCCChhhHHHhhhhhcccCcceeecccCCccccccchhhhhhhhhcccccccccccCCCcccCCCceee
Q 004178 198 LPMAFTTRTNWRGSFPREMLFMFCRQHWLSEPVFSTCSNSLKESSESSRFYEKSAALESAETGKECTSGGGTAASDNVRC 277 (770)
Q Consensus 198 lp~~~~~~~~w~g~~p~~~l~~fc~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 277 (770)
||....---+|...-|+..|-.+|..+++ .|.|... .. |......|.|
T Consensus 13 ~d~~~~~~~~~~~~d~Kt~LqE~~Qk~~~-~p~Y~~~-----------------------------~~--Gp~H~~~F~~ 60 (113)
T 1uil_A 13 VDLNAGLHGNWTLENAKARLNQYFQKEKI-QGEYKYT-----------------------------QV--GPDHNRSFIA 60 (113)
T ss_dssp CCSSHHHHCCCCHHHHHHHHHHHHHHSCC-CCCCEEE-----------------------------EE--SCSTTCEEEE
T ss_pred CCcCcccccccccCCHHHHHHHHHHHCCC-CCeEEEe-----------------------------eE--CCCCCCcEEE
Confidence 55555445678777899999999999998 8988732 11 1122334999
Q ss_pred EEEEeeccCCcccccCchhhhhhhhhhHhhhhhHHHHHHHh
Q 004178 278 EVKIFSKSRDPILECSPKEFYKKQNESIENASLKVLSWLNA 318 (770)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 318 (770)
+|.|.-+..+-.+ -....-+..-+|=|+||.++|..|..
T Consensus 61 ~V~v~~~~~~~~~--~~~G~G~SKK~AEq~AA~~AL~~L~~ 99 (113)
T 1uil_A 61 EMTIYIKQLGRRI--FAREHGSNKKLAAQSCALSLVRQLYH 99 (113)
T ss_dssp EEEEEETTTTEEE--EEECCCSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeeeccCCEE--EEEEeeCCHHHHHHHHHHHHHHHHHh
Confidence 9999533111111 11233466778999999999998864
No 379
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=60.82 E-value=53 Score=32.11 Aligned_cols=101 Identities=14% Similarity=0.043 Sum_probs=61.8
Q ss_pred CCEEEEEcCccchHHHHHhcCCC-CCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC---
Q 004178 532 ATTLVDFGCGSGSLLDSLLDYPT-ALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD--- 607 (770)
Q Consensus 532 ~~rVLDIGCGtG~ll~~LAk~gg-p~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp--- 607 (770)
..+|+=+||| ..+..+++... ... |+++|.+++.++.++ ..+.++.||+.+..
T Consensus 9 ~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--------------------~~~~~i~gd~~~~~~l~ 65 (234)
T 2aef_A 9 SRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR--------------------SGANFVHGDPTRVSDLE 65 (234)
T ss_dssp -CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--------------------TTCEEEESCTTCHHHHH
T ss_pred CCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--------------------cCCeEEEcCCCCHHHHH
Confidence 4689999986 44443333221 115 999999988765543 14678889987532
Q ss_pred -CCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCchhHHHh
Q 004178 608 -SRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEYNAILQ 660 (770)
Q Consensus 608 -~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~efN~lf~ 660 (770)
......|+|++.- +++....+.....+.+.|+ .++.-..+.++...+.
T Consensus 66 ~a~i~~ad~vi~~~-----~~d~~n~~~~~~a~~~~~~~~iia~~~~~~~~~~l~ 115 (234)
T 2aef_A 66 KANVRGARAVIVDL-----ESDSETIHCILGIRKIDESVRIIAEAERYENIEQLR 115 (234)
T ss_dssp HTTCTTCSEEEECC-----SCHHHHHHHHHHHHHHCSSSEEEEECSSGGGHHHHH
T ss_pred hcCcchhcEEEEcC-----CCcHHHHHHHHHHHHHCCCCeEEEEECCHhHHHHHH
Confidence 1245788887652 3344444444567778888 7777766665555544
No 380
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=60.53 E-value=9.2 Score=40.50 Aligned_cols=51 Identities=24% Similarity=0.299 Sum_probs=39.3
Q ss_pred HHHHhhcCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 523 ALQHIKESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 523 Il~~L~~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
+.+..+..++++||-+|||. |.++..+++..+ ..+|+++|.+++.++.+++
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~~a~~ 233 (371)
T 1f8f_A 182 CINALKVTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLELAKQ 233 (371)
T ss_dssp HHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHHH
Confidence 33445566789999999986 888888887543 1379999999999988865
No 381
>1whn_A Hypothetical protein riken cDNA 2310016K04; double-stranded RNA binding domain, DSRBD, DSRM, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.50.1.1
Probab=60.39 E-value=11 Score=35.35 Aligned_cols=81 Identities=17% Similarity=0.303 Sum_probs=56.9
Q ss_pred cCCcceeeccccCCCChhhHHHhhhhhcccCcceeecccCCccccccchhhhhhhhhcccccccccccCCCcccCCCcee
Q 004178 197 ELPMAFTTRTNWRGSFPREMLFMFCRQHWLSEPVFSTCSNSLKESSESSRFYEKSAALESAETGKECTSGGGTAASDNVR 276 (770)
Q Consensus 197 ~lp~~~~~~~~w~g~~p~~~l~~fc~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (770)
+.+..|..+..+...-|..+|-.+|..+.+..|.|.... . .....|.
T Consensus 12 ~~~~~~~r~~~~~~~d~Kt~LQE~~Qk~~~~~P~Y~~v~-----------------------------~----~H~~~F~ 58 (128)
T 1whn_A 12 KMAIRFDRRAYPPQITPKMCLLEWCRREKLPQPVYETVQ-----------------------------R----TIDRMFC 58 (128)
T ss_dssp EECCCCCGGGSCTTCCHHHHHHHHHHHTTCCCCCCCEEE-----------------------------C----SSSCCEE
T ss_pred eeehhhhhhhcccCCCHHHHHHHHHHHcCCCCCeEEEEe-----------------------------e----cCCCcEE
Confidence 344455444555567899999999999999999987760 0 1123399
Q ss_pred eEEEEeeccCCcccccCchhhh-hhhhhhHhhhhhHHHHHHH
Q 004178 277 CEVKIFSKSRDPILECSPKEFY-KKQNESIENASLKVLSWLN 317 (770)
Q Consensus 277 c~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~~ 317 (770)
|+|.|-.+. + ....- +..-+|=|+||.++|.+|.
T Consensus 59 v~V~v~g~~------~-g~G~G~~SKK~AEQ~AA~~AL~~L~ 93 (128)
T 1whn_A 59 SVVTVAEQK------Y-QSTLWDKSKKLAEQTAAIVCLRSQG 93 (128)
T ss_dssp EEEEETTEE------E-EESSCBSSHHHHHHHHHHHHHHHHT
T ss_pred EEEEECCEE------E-EEEeccCCHHHHHHHHHHHHHHHHh
Confidence 999984321 2 12334 6777899999999999984
No 382
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=60.38 E-value=43 Score=35.01 Aligned_cols=93 Identities=18% Similarity=0.122 Sum_probs=56.6
Q ss_pred CCEEEEEcCcc--chHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 532 ATTLVDFGCGS--GSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 532 ~~rVLDIGCGt--G~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
..+|.=||+|. |.++..|++.+ ...+|+++|.+++.++.+.+. +. +.-...|..+. .
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G-~~~~V~~~dr~~~~~~~a~~~----------------G~--~~~~~~~~~~~--~ 91 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSG-FKGKIYGYDINPESISKAVDL----------------GI--IDEGTTSIAKV--E 91 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTT-CCSEEEEECSCHHHHHHHHHT----------------TS--CSEEESCTTGG--G
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHC----------------CC--cchhcCCHHHH--h
Confidence 46899999995 34566677766 123899999999888777541 11 10112233320 1
Q ss_pred CCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEe
Q 004178 610 LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVST 650 (770)
Q Consensus 610 d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIIST 650 (770)
....|+|+.. ++......+.+++...++||.+++.+
T Consensus 92 ~~~aDvVila-----vp~~~~~~vl~~l~~~l~~~~iv~d~ 127 (314)
T 3ggo_A 92 DFSPDFVMLS-----SPVRTFREIAKKLSYILSEDATVTDQ 127 (314)
T ss_dssp GGCCSEEEEC-----SCGGGHHHHHHHHHHHSCTTCEEEEC
T ss_pred hccCCEEEEe-----CCHHHHHHHHHHHhhccCCCcEEEEC
Confidence 2467887654 34344445556788889999555543
No 383
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=59.78 E-value=24 Score=32.44 Aligned_cols=100 Identities=20% Similarity=0.216 Sum_probs=54.2
Q ss_pred CCCCEEEEEcCcc-chH-HHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 530 SCATTLVDFGCGS-GSL-LDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 530 ~~~~rVLDIGCGt-G~l-l~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
..+.+|+=+|||. |.. +..|.+.+ .+|+++|.+++.++.+++ ...+.++.+|..+..
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g---~~V~vid~~~~~~~~~~~------------------~~g~~~~~~d~~~~~ 75 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSG---HSVVVVDKNEYAFHRLNS------------------EFSGFTVVGDAAEFE 75 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT---CEEEEEESCGGGGGGSCT------------------TCCSEEEESCTTSHH
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCC---CeEEEEECCHHHHHHHHh------------------cCCCcEEEecCCCHH
Confidence 3568999999975 443 34444555 689999998765433310 112445666654321
Q ss_pred ---C-CCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCCch
Q 004178 608 ---S-RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNYEY 655 (770)
Q Consensus 608 ---~-~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ef 655 (770)
. ....+|+|+..-- .+........+.+.+.|. .++...-+...
T Consensus 76 ~l~~~~~~~ad~Vi~~~~-----~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~ 123 (155)
T 2g1u_A 76 TLKECGMEKADMVFAFTN-----DDSTNFFISMNARYMFNVENVIARVYDPEK 123 (155)
T ss_dssp HHHTTTGGGCSEEEECSS-----CHHHHHHHHHHHHHTSCCSEEEEECSSGGG
T ss_pred HHHHcCcccCCEEEEEeC-----CcHHHHHHHHHHHHHCCCCeEEEEECCHHH
Confidence 1 1346888876432 222223333355555565 55555544443
No 384
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=58.99 E-value=6.3 Score=39.72 Aligned_cols=90 Identities=19% Similarity=0.317 Sum_probs=62.8
Q ss_pred CCccCCCCceeEEEEEEEEEecccccccceec----ccceeeeccCCcccccceeeeeeccccccceecccCCchhhhhh
Q 004178 395 SGIYPSNGCLSFISYSVSLVIEGETMKELLES----REEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELILA 470 (770)
Q Consensus 395 ~~~~~~~g~~~~i~y~~~l~~~~~~~~~l~e~----~~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elfla 470 (770)
.|-.|..|..|.|.|...|. +|+ ++.+ +..++|.+ |.+++-++..+..|.+|....|. +||...+-.
T Consensus 117 ~G~~p~~gD~V~V~Y~g~l~-dG~----vfdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Gek~~v~--IP~~laYG~ 187 (213)
T 1fd9_A 117 NGVKPGKSDTVTVEYTGRLI-DGT----VFDSTEKTGKPATFQV--SQVIPGWTEALQLMPAGSTWEIY--VPSGLAYGP 187 (213)
T ss_dssp CSCCCCTTCEEEEEEEEEET-TSC----EEEEHHHHCSCEEEEG--GGSCHHHHHHHTTCCTTCEEEEE--ECGGGTTTT
T ss_pred CCccCCCCCEEEEEEEEEEC-CCC----EEeeccccCCCEEEEc--CchhhHHHHHHcCCCCCCEEEEE--ECchhccCc
Confidence 57889999999999999975 443 4543 25688888 47999999999999999999887 777655543
Q ss_pred ccCCccchhhcccccccccceeeeecccC
Q 004178 471 AADDSARTFSLLSSRACCLEYHITLLRVT 499 (770)
Q Consensus 471 a~~~~~~diS~Ls~~~~~Ley~i~lL~v~ 499 (770)
..... .++...- |.|.+.++.+.
T Consensus 188 ~g~~~-----~Ipp~st-LiF~VeLl~v~ 210 (213)
T 1fd9_A 188 RSVGG-----PIGPNET-LIFKIHLISVK 210 (213)
T ss_dssp CCCSS-----SCCTTCC-EEEEEEEEEEE
T ss_pred cCCCC-----CCCCCCe-EEEEEEEEEEE
Confidence 32110 1222333 67777776543
No 385
>1uhz_A Staufen (RNA binding protein) homolog 2; DSRM, staufen homolog 2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.50.1.1
Probab=58.15 E-value=7.4 Score=33.95 Aligned_cols=70 Identities=19% Similarity=0.109 Sum_probs=49.1
Q ss_pred CCChhhHHHhhhhhcccCcceeecccCCccccccchhhhhhhhhcccccccccccCCCcccCCCceeeEEEEeeccCCcc
Q 004178 210 GSFPREMLFMFCRQHWLSEPVFSTCSNSLKESSESSRFYEKSAALESAETGKECTSGGGTAASDNVRCEVKIFSKSRDPI 289 (770)
Q Consensus 210 g~~p~~~l~~fc~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 289 (770)
|--|...|-.+|..+.+..|.|.... .. |......|.|+|.|-. .+
T Consensus 5 ~~d~Kt~LqE~~Q~~~~~~P~Y~~~~----------------------------~~--Gp~H~~~F~~~v~v~g----~~ 50 (89)
T 1uhz_A 5 SSGPISRLAQIQQARKEKEPDYILLS----------------------------ER--GMPRRREFVMQVKVGN----EV 50 (89)
T ss_dssp SSCHHHHHHHHHHHTTSCCCEEEEEE----------------------------EE--SCSTTCEEEEEEEETT----EE
T ss_pred CCCHHHHHHHHHHHhCCCCCeEEEEE----------------------------eE--CCCCCCeEEEEEEECC----EE
Confidence 34588999999999999999998750 01 2222334999999842 11
Q ss_pred cccCchhhhhhhhhhHhhhhhHHHHHHH
Q 004178 290 LECSPKEFYKKQNESIENASLKVLSWLN 317 (770)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 317 (770)
....=+...+|=|+||.++|.+|.
T Consensus 51 ----~~G~G~SKK~Aeq~AA~~AL~~L~ 74 (89)
T 1uhz_A 51 ----ATGTGPNKKIAKKNAAEAMLLQLG 74 (89)
T ss_dssp ----EEEEESSHHHHHHHHHHHHHHHHT
T ss_pred ----EEEeeCCHHHHHHHHHHHHHHHHh
Confidence 223335557899999999999984
No 386
>2dix_A Interferon-inducible double stranded RNA- dependent protein kinase activator A; structure genomics, DSRM domain, hypothetical protein PRKRA; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=57.79 E-value=12 Score=32.21 Aligned_cols=69 Identities=14% Similarity=0.117 Sum_probs=48.1
Q ss_pred CCChhhHHHhhhhhcccCcceeecccCCccccccchhhhhhhhhcccccccccccCCCcccCCCceeeEEEEeeccCCcc
Q 004178 210 GSFPREMLFMFCRQHWLSEPVFSTCSNSLKESSESSRFYEKSAALESAETGKECTSGGGTAASDNVRCEVKIFSKSRDPI 289 (770)
Q Consensus 210 g~~p~~~l~~fc~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 289 (770)
+.-|...|-.+|..+. ..|.|... . .. |......|.|+|.|- + +
T Consensus 7 ~~d~Ks~LqE~~q~~~-~~p~Y~~~--~--------------------------~~--Gp~h~~~F~~~v~v~----~-~ 50 (84)
T 2dix_A 7 GKTPIQVLHEYGMKTK-NIPVYECE--R--------------------------SD--VQIHVPTFTFRVTVG----D-I 50 (84)
T ss_dssp CCCHHHHHHHHHHHTT-CCCEEEEE--E--------------------------EE--CSSSSCEEEEEEEET----T-E
T ss_pred CCCHHHHHHHHHHHcC-CCCeEEEE--E--------------------------eE--CCCCCCeEEEEEEEC----C-E
Confidence 3468899999998887 57888765 0 01 222233499999983 2 1
Q ss_pred cccCchhhhhhhhhhHhhhhhHHHHHHH
Q 004178 290 LECSPKEFYKKQNESIENASLKVLSWLN 317 (770)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 317 (770)
+ ....-+..-+|=|+||.++|..|.
T Consensus 51 ~---~~G~G~SKK~Aeq~AA~~aL~~L~ 75 (84)
T 2dix_A 51 T---CTGEGTSKKLAKHRAAEAAINILK 75 (84)
T ss_dssp E---EEECSSCTTHHHHHHHHHHHHHHH
T ss_pred E---EEeeeCCHHHHHHHHHHHHHHHHh
Confidence 1 234456677899999999999885
No 387
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=56.68 E-value=24 Score=34.69 Aligned_cols=76 Identities=21% Similarity=0.187 Sum_probs=54.8
Q ss_pred CCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 531 CATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
.++++|=.|++.|. ++..|++.+ .+|+.+|.+++.++...+.+.. ...++.++.+|+.+..
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~D~~~~~ 71 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREG---AAVVVADINAEAAEAVAKQIVA-------------DGGTAISVAVDVSDPE 71 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH-------------TTCEEEEEECCTTSHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHHHh-------------cCCcEEEEEccCCCHH
Confidence 46889999987663 566777777 7899999999888877665532 1246888999987643
Q ss_pred C----------CCCCccEEEecccc
Q 004178 608 S----------RLHGFDIGTCLEVI 622 (770)
Q Consensus 608 ~----------~d~sFDlVVc~eVL 622 (770)
. ..+..|+++.+..+
T Consensus 72 ~~~~~~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 72 SAKAMADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCc
Confidence 2 12478999986543
No 388
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=55.91 E-value=1.2e+02 Score=32.21 Aligned_cols=160 Identities=11% Similarity=-0.009 Sum_probs=86.5
Q ss_pred CCCEEEEEcCccch--HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhccccc--CCCC----CCCccEEEEECC
Q 004178 531 CATTLVDFGCGSGS--LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDA--AVPC----TDVKSAVLFDGS 602 (770)
Q Consensus 531 ~~~rVLDIGCGtG~--ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~--l~pr----~~~~~Vef~~GD 602 (770)
...+|.=||+|+-. ++..++..+ .+|+.+|++++.++.+.+++........+. +.+. ....++++. .|
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G---~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~-~~ 80 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGG---FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TN 80 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT---CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CC
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCC---CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccc-cc
Confidence 35689999999632 455566776 899999999999998887765443221100 0000 001123332 23
Q ss_pred ccccCCCCCCccEEEeccccccCCh--hHHHHHHHHHHHcccCCEEEE-EecCCchhHHHhhhccccCCCCCchhhhhcc
Q 004178 603 ITVFDSRLHGFDIGTCLEVIEHMEE--DEASQFGNIVLSSFRPRILIV-STPNYEYNAILQKSSSTIQEDDPDEKTQLQS 679 (770)
Q Consensus 603 aedlp~~d~sFDlVVc~eVLEHL~~--d~~~~fleeI~rvLKPG~LII-STPN~efN~lf~~~~~~g~~e~pde~~~~~~ 679 (770)
+.+ .....|+| +|-+++ +....+.+++-++++|+.++. .|-...-..+.... ..|+.-. .
T Consensus 81 l~~---a~~~ad~V-----iEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~~~------~~p~r~i---g 143 (319)
T 3ado_A 81 LAE---AVEGVVHI-----QECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGL------AHVKQCI---V 143 (319)
T ss_dssp HHH---HTTTEEEE-----EECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTC------TTGGGEE---E
T ss_pred hHh---HhccCcEE-----eeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhhhc------cCCCcEE---E
Confidence 222 12445654 344442 234566667889999984444 33333322232221 1122111 2
Q ss_pred ccccCCCcc--------cccCHHHHHHHHHHHHHHCCcEE
Q 004178 680 CKFRNHDHK--------FEWTRDQFNCWATELAARHNYSV 711 (770)
Q Consensus 680 ~~fRh~DHk--------fewTreEF~~Wa~~La~r~GY~V 711 (770)
..|-+|-|. -.+|..+..+.+..++++.|-..
T Consensus 144 ~HffNP~~~m~LVEiv~g~~Ts~~~~~~~~~~~~~~gk~p 183 (319)
T 3ado_A 144 AHPVNPPYYIPLVELVPHPETSPATVDRTHALMRKIGQSP 183 (319)
T ss_dssp EEECSSTTTCCEEEEEECTTCCHHHHHHHHHHHHHTTCEE
T ss_pred ecCCCCccccchHHhcCCCCCcHHHHHHHHHHHHHhCCcc
Confidence 334455444 34788888888888888887543
No 389
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=55.48 E-value=18 Score=36.92 Aligned_cols=105 Identities=10% Similarity=0.031 Sum_probs=58.6
Q ss_pred CEEEEEcCcc--chHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhccccc---CCCC---CCCccEEEEECCcc
Q 004178 533 TTLVDFGCGS--GSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDA---AVPC---TDVKSAVLFDGSIT 604 (770)
Q Consensus 533 ~rVLDIGCGt--G~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~---l~pr---~~~~~Vef~~GDae 604 (770)
++|.=||+|. +.++..+++.+ .+|+.+|.+++.++.+.+.+.......... +.+. ....++.. ..|+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G---~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHG---FAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 5788899985 23455666666 799999999999988877543221110000 0000 00012232 22332
Q ss_pred ccCCCCCCccEEEeccccccCChh--HHHHHHHHHHHcccCCEEEEE
Q 004178 605 VFDSRLHGFDIGTCLEVIEHMEED--EASQFGNIVLSSFRPRILIVS 649 (770)
Q Consensus 605 dlp~~d~sFDlVVc~eVLEHL~~d--~~~~fleeI~rvLKPG~LIIS 649 (770)
+. ....|+|+. .++++ ....+.+++...++|+.++++
T Consensus 81 ~~---~~~aDlVi~-----av~~~~~~~~~v~~~l~~~~~~~~il~s 119 (283)
T 4e12_A 81 QA---VKDADLVIE-----AVPESLDLKRDIYTKLGELAPAKTIFAT 119 (283)
T ss_dssp HH---TTTCSEEEE-----CCCSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred HH---hccCCEEEE-----eccCcHHHHHHHHHHHHhhCCCCcEEEE
Confidence 21 245788643 44433 445566678889999955554
No 390
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=55.10 E-value=17 Score=37.92 Aligned_cols=48 Identities=19% Similarity=0.177 Sum_probs=39.2
Q ss_pred HHhhcCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 525 QHIKESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 525 ~~L~~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
+.....++++||-+|+|. |.++..+++..+ .+|+++|.+++-++.+++
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~ 208 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAKLNLARR 208 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHH
Confidence 444666789999999985 888888888654 699999999999988865
No 391
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=55.10 E-value=17 Score=38.16 Aligned_cols=49 Identities=18% Similarity=0.198 Sum_probs=38.5
Q ss_pred HHhhcCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 525 QHIKESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 525 ~~L~~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
+..+..++++||-+|+|. |.++..+++..+ ..+|+++|.+++-++.+++
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDLSATRLSKAKE 214 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH
Confidence 445666789999999985 888888887553 1389999999998888864
No 392
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=54.70 E-value=51 Score=34.40 Aligned_cols=49 Identities=14% Similarity=0.094 Sum_probs=39.4
Q ss_pred HHhhcCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 525 QHIKESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 525 ~~L~~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
+.....++++||-+|+|. |.++..+++..+ ..+|+++|.+++-++.+++
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~ 209 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRKHCCDIALE 209 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCHHHHHHHHH
Confidence 555667789999999985 888888888763 2389999999998888865
No 393
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=54.20 E-value=5.9 Score=38.41 Aligned_cols=91 Identities=18% Similarity=0.255 Sum_probs=64.4
Q ss_pred CCcc-CCCCceeEEEEEEEEEecccccccceecc----cceeeeccCCcccccceeeeeeccccccceecccCCchhhhh
Q 004178 395 SGIY-PSNGCLSFISYSVSLVIEGETMKELLESR----EEFEFEMGTGAVIPQVEVVTAQMSVGQSACFCKELPPQELIL 469 (770)
Q Consensus 395 ~~~~-~~~g~~~~i~y~~~l~~~~~~~~~l~e~~----~ef~fe~g~~~~~~~~~~~~~~~sv~q~~~~~~~l~p~elfl 469 (770)
+|.. |..|..|.|.|...|. +|+ ++.+. ..|+|.+ |.+++-++..+..|.+|....|. +||...+-
T Consensus 48 ~G~~~~~~gd~V~v~Y~g~l~-dG~----~fdss~~~g~p~~f~l--g~vI~G~eeaL~gMk~Ge~~~~~--Ip~~laYG 118 (167)
T 1jvw_A 48 SGKRAPAIDDKCEVHYTGRLR-DGT----VFDSSRERGKPTTFRP--NEVIKGWTEALQLMREGDRWRLF--IPYDLAYG 118 (167)
T ss_dssp CCSBCCCTTCCEEEEEEEECT-TSC----EEEEHHHHTSCEEECG--GGSCHHHHHHHTTCCTTCEEEEE--ECGGGTTT
T ss_pred CCCcCCCCCCEEEEEEEEEEC-CCC----EEeeccccCCCEEEEe--CchhHHHHHHHcCCCCCCEEEEE--ECchhhCC
Confidence 4776 9999999999999864 442 45532 5688887 57999999999999999999987 77665554
Q ss_pred hccCCccchhhcccccccccceeeeecccCC
Q 004178 470 AAADDSARTFSLLSSRACCLEYHITLLRVTE 500 (770)
Q Consensus 470 aa~~~~~~diS~Ls~~~~~Ley~i~lL~v~e 500 (770)
...... .++..+- |.|.+.++.+..
T Consensus 119 ~~g~~~-----~Ipp~s~-LiF~VeL~~i~~ 143 (167)
T 1jvw_A 119 VTGGGG-----MIPPYSP-LEFDVELISIKD 143 (167)
T ss_dssp TTCSSS-----SSCTTCC-EEEEEEEEEEGG
T ss_pred CCCCCC-----CcCCCCe-EEEEEEEEEEEc
Confidence 332110 1222333 788888887664
No 394
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=53.82 E-value=76 Score=32.80 Aligned_cols=107 Identities=11% Similarity=0.134 Sum_probs=60.7
Q ss_pred CCCEEEEEcCccchHHHHHhcC------CCCCceEEEEeCChHHH------------------------HHHHHHHh--h
Q 004178 531 CATTLVDFGCGSGSLLDSLLDY------PTALEKIVGVDISQKSL------------------------SRAAKIIH--S 578 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~------ggp~~~VvGVDISeemL------------------------e~ArkrL~--~ 578 (770)
-+..|+|+||-.|..+..++.. .++..+|+|+|.-+.+- +..++.+. .
T Consensus 69 vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 69 VPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp SCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 4679999999999988776532 12458999999221111 11111111 0
Q ss_pred hhhcccccCCCCCC-CccEEEEECCcccc-CC-----CCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEE
Q 004178 579 KLSKKLDAAVPCTD-VKSAVLFDGSITVF-DS-----RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIV 648 (770)
Q Consensus 579 ~~s~~~~~l~pr~~-~~~Vef~~GDaedl-p~-----~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LII 648 (770)
.... -.. ..+++++.|++.+. +. +...||+|..-.= .. +......+.+...|+||.+|+
T Consensus 149 ~~~~-------~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D---~Y-~~t~~~le~~~p~l~~GGvIv 214 (257)
T 3tos_A 149 CSDF-------FGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD---LY-EPTKAVLEAIRPYLTKGSIVA 214 (257)
T ss_dssp TTST-------TTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC---CH-HHHHHHHHHHGGGEEEEEEEE
T ss_pred hhhh-------cCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc---cc-chHHHHHHHHHHHhCCCcEEE
Confidence 0000 012 26899999998663 21 2346999955431 12 222234456888999994444
No 395
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=52.83 E-value=78 Score=31.24 Aligned_cols=77 Identities=8% Similarity=0.041 Sum_probs=51.3
Q ss_pred CCCEEEEEcCc--c--ch-HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccc
Q 004178 531 CATTLVDFGCG--S--GS-LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITV 605 (770)
Q Consensus 531 ~~~rVLDIGCG--t--G~-ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaed 605 (770)
.++++|=.|++ . |. ++..|++.+ .+|+.++.++...+.+.+.... ....++.++.+|+.+
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~------------~~~~~~~~~~~D~~~ 70 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAG---ARLIFTYAGERLEKSVHELAGT------------LDRNDSIILPCDVTN 70 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHHHHHT------------SSSCCCEEEECCCSS
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCC---CEEEEecCchHHHHHHHHHHHh------------cCCCCceEEeCCCCC
Confidence 46789999976 3 33 567777877 7999999887655555443321 122368899999876
Q ss_pred cCC----------CCCCccEEEecccc
Q 004178 606 FDS----------RLHGFDIGTCLEVI 622 (770)
Q Consensus 606 lp~----------~d~sFDlVVc~eVL 622 (770)
... ..+.+|+++....+
T Consensus 71 ~~~v~~~~~~~~~~~g~id~li~~Ag~ 97 (266)
T 3oig_A 71 DAEIETCFASIKEQVGVIHGIAHCIAF 97 (266)
T ss_dssp SHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHhCCeeEEEEcccc
Confidence 532 12478998876543
No 396
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=52.15 E-value=1e+02 Score=30.94 Aligned_cols=101 Identities=14% Similarity=0.074 Sum_probs=54.1
Q ss_pred CEEEEEcCcc-c-hHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEEC---CccccC
Q 004178 533 TTLVDFGCGS-G-SLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDG---SITVFD 607 (770)
Q Consensus 533 ~rVLDIGCGt-G-~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~G---Daedlp 607 (770)
.+|.=||+|. | .++..|++.+ .+|+.+|.+++.++..++.- ... ... ........ +..+..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~r~~~~~~~~~~~g---~~~-------~~~-~~~~~~~~~~~~~~~~~ 69 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGG---NDVTLIDQWPAHIEAIRKNG---LIA-------DFN-GEEVVANLPIFSPEEID 69 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHHC---EEE-------EET-TEEEEECCCEECGGGCC
T ss_pred CeEEEECcCHHHHHHHHHHHhCC---CcEEEEECCHHHHHHHHhCC---EEE-------EeC-CCeeEecceeecchhhc
Confidence 4789999985 3 3455666666 68999999998777665420 000 000 00000000 111111
Q ss_pred CCCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEecC
Q 004178 608 SRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPN 652 (770)
Q Consensus 608 ~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTPN 652 (770)
......|+|+..- +......+.+.+...++|+.++++..|
T Consensus 70 ~~~~~~d~vi~~v-----~~~~~~~v~~~l~~~l~~~~~iv~~~~ 109 (316)
T 2ew2_A 70 HQNEQVDLIIALT-----KAQQLDAMFKAIQPMITEKTYVLCLLN 109 (316)
T ss_dssp TTSCCCSEEEECS-----CHHHHHHHHHHHGGGCCTTCEEEECCS
T ss_pred ccCCCCCEEEEEe-----ccccHHHHHHHHHHhcCCCCEEEEecC
Confidence 1112688876543 333344555668888898855555544
No 397
>2cpn_A TAR RNA-binding protein 2; double-stranded RNA binding domain, DSRBD, DSRM., structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=52.10 E-value=10 Score=33.06 Aligned_cols=69 Identities=17% Similarity=0.117 Sum_probs=48.4
Q ss_pred CChhhHHHhhhhhcccCcceeecccCCccccccchhhhhhhhhcccccccccccCCCcccCCCceeeEEEEeeccCCccc
Q 004178 211 SFPREMLFMFCRQHWLSEPVFSTCSNSLKESSESSRFYEKSAALESAETGKECTSGGGTAASDNVRCEVKIFSKSRDPIL 290 (770)
Q Consensus 211 ~~p~~~l~~fc~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 290 (770)
.-|+.+|-.+|..+++..|.|.... .. |......|.|+|.|-.+ +
T Consensus 16 ~d~Kt~LqE~~Qk~~~~~P~Y~~~~----------------------------~~--Gp~h~~~F~~~v~i~g~----~- 60 (89)
T 2cpn_A 16 CNPVGALQELVVQKGWRLPEYTVTQ----------------------------ES--GPAHRKEFTMTCRVERF----I- 60 (89)
T ss_dssp CCHHHHHHHHHHHHTCCCCEEEEEE----------------------------EE--CCSSSCEEEEEEEETTE----E-
T ss_pred CCHHHHHHHHHHHcCCCCCeEEEEe----------------------------eE--CCCCCCeEEEEEEECCE----E-
Confidence 3578999999999999999998650 01 11223349999998531 1
Q ss_pred ccCchhhhhhhhhhHhhhhhHHHHHHH
Q 004178 291 ECSPKEFYKKQNESIENASLKVLSWLN 317 (770)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~l~~l~~~~ 317 (770)
....=+..-+|=|+||.++|..|.
T Consensus 61 ---~~G~G~SKK~Aeq~AA~~AL~~L~ 84 (89)
T 2cpn_A 61 ---EIGSGTSKKLAKRNAAAKMLLRVS 84 (89)
T ss_dssp ---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred ---EEeeeCCHHHHHHHHHHHHHHHHH
Confidence 122335566899999999999884
No 398
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=51.63 E-value=21 Score=36.96 Aligned_cols=63 Identities=24% Similarity=0.447 Sum_probs=50.9
Q ss_pred CCc-cCCCCceeEEEEEEEEEecccccccceecccceeeeccCCc---ccccceeeeeeccccccceecccCCchh
Q 004178 395 SGI-YPSNGCLSFISYSVSLVIEGETMKELLESREEFEFEMGTGA---VIPQVEVVTAQMSVGQSACFCKELPPQE 466 (770)
Q Consensus 395 ~~~-~~~~g~~~~i~y~~~l~~~~~~~~~l~e~~~ef~fe~g~~~---~~~~~~~~~~~~sv~q~~~~~~~l~p~e 466 (770)
.|. .|..|+.|.|.|+..+ +| .++.+. .++|-+|.|. +.+-++..+..|.+|....+. ++|..
T Consensus 36 ~g~~~p~~~~~v~v~y~g~~--~g----~~fd~~-~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~~l~--i~p~~ 102 (336)
T 1p5q_A 36 EGYAKPNEGAIVEVALEGYY--KD----KLFDQR-ELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVY--LKPSY 102 (336)
T ss_dssp CCSCCCCTTCEEEEEEEEEE--TT----EEEEEE-EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEE--ECTTT
T ss_pred CCCCCCCCCCeEEEEEEEEE--CC----EEEecC-CeEEEeCCCCccccchHHHHHHhcCCCCCeEEEE--ECCcc
Confidence 565 7999999999999987 54 355544 7999999886 477899999999999998877 56664
No 399
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=50.10 E-value=18 Score=44.40 Aligned_cols=44 Identities=9% Similarity=0.068 Sum_probs=34.8
Q ss_pred CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHH
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKI 575 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~Arkr 575 (770)
...+++|+=||.|.+..-|.+.+ -...|.++|+++.+++.-+.+
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG-~~~vv~avEid~~A~~ty~~N 582 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAG-ISDTLWAIEMWDPAAQAFRLN 582 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHT-SEEEEEEECSSHHHHHHHHHH
T ss_pred CCCeEEEeccCccHHHHHHHHCC-CCceEEEEECCHHHHHHHHHh
Confidence 34589999999999998887765 113578999999998877654
No 400
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=49.45 E-value=23 Score=37.80 Aligned_cols=48 Identities=15% Similarity=0.105 Sum_probs=38.2
Q ss_pred HhhcCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 526 HIKESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 526 ~L~~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
.....++++||-+|||. |.++..+++..+ ..+|+++|.+++-++.+++
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHHH
Confidence 44566789999999975 888888887653 2379999999999988865
No 401
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=49.40 E-value=50 Score=34.90 Aligned_cols=42 Identities=12% Similarity=0.205 Sum_probs=34.5
Q ss_pred CCCEEEEEc-Cc-cchHHHHHhcC-CCCCceEEEEeCChHHHHHHHH
Q 004178 531 CATTLVDFG-CG-SGSLLDSLLDY-PTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 531 ~~~rVLDIG-CG-tG~ll~~LAk~-ggp~~~VvGVDISeemLe~Ark 574 (770)
++++||=+| +| .|.++..+++. ++ .+|+++|.+++-++.+++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g--~~Vi~~~~~~~~~~~~~~ 215 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTD--LTVIATASRPETQEWVKS 215 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCC--SEEEEECSSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcC--CEEEEEeCCHHHHHHHHH
Confidence 678999999 55 58888888885 43 799999999998888865
No 402
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=48.44 E-value=34 Score=36.13 Aligned_cols=46 Identities=15% Similarity=0.092 Sum_probs=35.0
Q ss_pred hhcC-CCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 527 IKES-CATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 527 L~~~-~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
.... ++++||-+|+|. |.++..+++..+ .+|+++|.+++-++.+++
T Consensus 182 ~~~~~~g~~VlV~GaG~vG~~~~q~a~~~G--a~Vi~~~~~~~~~~~~~~ 229 (366)
T 1yqd_A 182 FGLDEPGKHIGIVGLGGLGHVAVKFAKAFG--SKVTVISTSPSKKEEALK 229 (366)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCGGGHHHHHH
T ss_pred cCcCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 3445 788999999874 677777776553 689999999988777754
No 403
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=47.73 E-value=1.1e+02 Score=33.83 Aligned_cols=107 Identities=19% Similarity=0.186 Sum_probs=58.1
Q ss_pred CCEEEEEcCcc-c-hHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhccccc--CCCCC-CCccEEEEECCcccc
Q 004178 532 ATTLVDFGCGS-G-SLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDA--AVPCT-DVKSAVLFDGSITVF 606 (770)
Q Consensus 532 ~~rVLDIGCGt-G-~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~--l~pr~-~~~~Vef~~GDaedl 606 (770)
..+|.-||+|. | .++..+++.+ .+|+++|++++.++.+++.+.......... +.+.. ......+ ..|.+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G---~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~- 111 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVG---ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE- 111 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT---CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG-
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC---CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH-
Confidence 35899999997 3 3556667766 799999999999888776443211000000 00000 0111222 344422
Q ss_pred CCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEE
Q 004178 607 DSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVS 649 (770)
Q Consensus 607 p~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIIS 649 (770)
....|+|+..- .+.+ +....+.+.+...++|+.++++
T Consensus 112 ---~~~aDlVIeaV-pe~~--~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 112 ---LSTVDLVVEAV-FEDM--NLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp ---GTTCSEEEECC-CSCH--HHHHHHHHHHHHHSCTTCEEEE
T ss_pred ---HCCCCEEEEcC-CCCH--HHHHHHHHHHHhhCCCCeEEEe
Confidence 24678875533 1211 1234555568888999944444
No 404
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=47.56 E-value=89 Score=31.19 Aligned_cols=89 Identities=13% Similarity=0.144 Sum_probs=53.5
Q ss_pred EEEEEcCcc-c-hHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCCCC
Q 004178 534 TLVDFGCGS-G-SLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSRLH 611 (770)
Q Consensus 534 rVLDIGCGt-G-~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~d~ 611 (770)
+|.=||||. | .++..|++.+ .+|+++|.+++.++.+.+ . +... . ...|..+. .
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~~~~~~~~~~~~-~---------------g~~~-~-~~~~~~~~----~ 56 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRG---HYLIGVSRQQSTCEKAVE-R---------------QLVD-E-AGQDLSLL----Q 56 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHH-T---------------TSCS-E-EESCGGGG----T
T ss_pred EEEEEcCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHh-C---------------CCCc-c-ccCCHHHh----C
Confidence 577899985 3 3455566665 689999999987776543 1 1110 1 12333333 4
Q ss_pred CccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEecC
Q 004178 612 GFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPN 652 (770)
Q Consensus 612 sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTPN 652 (770)
..|+|+.. +++.....+.+.+...++|+.+++.+-+
T Consensus 57 ~~D~vi~a-----v~~~~~~~~~~~l~~~~~~~~~vv~~~~ 92 (279)
T 2f1k_A 57 TAKIIFLC-----TPIQLILPTLEKLIPHLSPTAIVTDVAS 92 (279)
T ss_dssp TCSEEEEC-----SCHHHHHHHHHHHGGGSCTTCEEEECCS
T ss_pred CCCEEEEE-----CCHHHHHHHHHHHHhhCCCCCEEEECCC
Confidence 67887654 3434444555667788899955566533
No 405
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=47.44 E-value=29 Score=36.62 Aligned_cols=53 Identities=13% Similarity=0.057 Sum_probs=40.7
Q ss_pred HHHHHHHhhcCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 520 VEYALQHIKESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 520 ~e~Il~~L~~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
+..+.+.....++++||-+|+|. |.++..+++..+ .+|+++|.+++-++.+++
T Consensus 178 ~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~ 231 (363)
T 3uog_A 178 WFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSREKLDRAFA 231 (363)
T ss_dssp HHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCchhHHHHHH
Confidence 33343455666789999999885 778888887654 699999999998888765
No 406
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=46.78 E-value=28 Score=36.38 Aligned_cols=48 Identities=19% Similarity=0.122 Sum_probs=37.9
Q ss_pred HHhhcCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 525 QHIKESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 525 ~~L~~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
+..+..++++||-+|+|. |.++..+++..+ .+|+++|.+++-++.+++
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~ 210 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSPRRLEVAKN 210 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCHHHHHHHHH
Confidence 445666789999999875 777778887553 679999999998888864
No 407
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=46.78 E-value=33 Score=38.08 Aligned_cols=96 Identities=18% Similarity=0.171 Sum_probs=60.5
Q ss_pred CCEEEEEcCcc-chHH-HHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC-
Q 004178 532 ATTLVDFGCGS-GSLL-DSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS- 608 (770)
Q Consensus 532 ~~rVLDIGCGt-G~ll-~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~- 608 (770)
..+|+=+|||. |..+ ..|...+ ..|+.+|.+++.++.+.+++ .+..+.||+.+...
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~---~~v~vId~d~~~~~~~~~~~------------------~~~~i~Gd~~~~~~L 61 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGEN---NDITIVDKDGDRLRELQDKY------------------DLRVVNGHASHPDVL 61 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTT---EEEEEEESCHHHHHHHHHHS------------------SCEEEESCTTCHHHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHHhc------------------CcEEEEEcCCCHHHH
Confidence 56888888884 4433 3343444 88999999999998776533 46788999877542
Q ss_pred ---CCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 609 ---RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 609 ---~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
.-...|++++.- .+|....+.-.+++.+-|. ..+.-.-+.
T Consensus 62 ~~Agi~~ad~~ia~t-----~~De~Nl~~~~~Ak~~~~~~~~iar~~~~ 105 (461)
T 4g65_A 62 HEAGAQDADMLVAVT-----NTDETNMAACQVAFTLFNTPNRIARIRSP 105 (461)
T ss_dssp HHHTTTTCSEEEECC-----SCHHHHHHHHHHHHHHHCCSSEEEECCCH
T ss_pred HhcCCCcCCEEEEEc-----CChHHHHHHHHHHHHhcCCccceeEeccc
Confidence 235688876532 2344445444566666555 444444443
No 408
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=44.49 E-value=62 Score=31.99 Aligned_cols=76 Identities=13% Similarity=0.035 Sum_probs=52.1
Q ss_pred CCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 531 CATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
.++++|=.|++.|. ++..|++.+ .+|+.+|.+++.++...+.+.. ...++.++.+|+.+..
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~D~~~~~ 71 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLG---ASVYTCSRNQKELNDCLTQWRS-------------KGFKVEASVCDLSSRS 71 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH-------------TTCEEEEEECCTTCHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHh-------------cCCcEEEEEcCCCCHH
Confidence 46789999986653 455667776 7999999998877665554421 1236888999987643
Q ss_pred C----------CC-CCccEEEecccc
Q 004178 608 S----------RL-HGFDIGTCLEVI 622 (770)
Q Consensus 608 ~----------~d-~sFDlVVc~eVL 622 (770)
. .. +..|+++.+..+
T Consensus 72 ~~~~~~~~~~~~~~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 72 ERQELMNTVANHFHGKLNILVNNAGI 97 (260)
T ss_dssp HHHHHHHHHHHHTTTCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCCEEEECCCC
Confidence 1 11 579999886543
No 409
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=43.83 E-value=44 Score=32.66 Aligned_cols=76 Identities=18% Similarity=0.088 Sum_probs=53.7
Q ss_pred CCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 531 CATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
.++++|=.|++.|. ++..|++.+ .+|+.++.+++.++...+.+.. ...++.++.+|+.+..
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G---~~v~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~D~~~~~ 67 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKG---ATVVGTATSQASAEKFENSMKE-------------KGFKARGLVLNISDIE 67 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHHHHH-------------TTCCEEEEECCTTCHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHh-------------cCCceEEEEecCCCHH
Confidence 46788988977653 556777777 8999999999888776665532 1246889999987643
Q ss_pred C----------CCCCccEEEecccc
Q 004178 608 S----------RLHGFDIGTCLEVI 622 (770)
Q Consensus 608 ~----------~d~sFDlVVc~eVL 622 (770)
. ..+..|+++.+-.+
T Consensus 68 ~~~~~~~~~~~~~~~id~li~~Ag~ 92 (247)
T 3lyl_A 68 SIQNFFAEIKAENLAIDILVNNAGI 92 (247)
T ss_dssp HHHHHHHHHHHTTCCCSEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 1 23578999886543
No 410
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=43.68 E-value=1e+02 Score=31.59 Aligned_cols=90 Identities=14% Similarity=0.152 Sum_probs=50.6
Q ss_pred cCCCCEEEEEcCcc-chHH-HHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc
Q 004178 529 ESCATTLVDFGCGS-GSLL-DSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF 606 (770)
Q Consensus 529 ~~~~~rVLDIGCGt-G~ll-~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl 606 (770)
...+++|+=+|+|. |... ..+...+ .+|+++|.+++..+.+.+ + + ++... ..++
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G---~~V~~~dr~~~~~~~~~~-~---------------g---~~~~~--~~~l 207 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALG---AKVKVGARESDLLARIAE-M---------------G---MEPFH--ISKA 207 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHH-T---------------T---SEEEE--GGGH
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCC---CEEEEEECCHHHHHHHHH-C---------------C---CeecC--hhhH
Confidence 34688999999984 4433 3333444 699999999876554432 1 1 12211 1122
Q ss_pred CCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEe
Q 004178 607 DSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVST 650 (770)
Q Consensus 607 p~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIIST 650 (770)
.......|+|+..--.+.+. . .....+|||.+++.+
T Consensus 208 ~~~l~~aDvVi~~~p~~~i~-~-------~~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 208 AQELRDVDVCINTIPALVVT-A-------NVLAEMPSHTFVIDL 243 (293)
T ss_dssp HHHTTTCSEEEECCSSCCBC-H-------HHHHHSCTTCEEEEC
T ss_pred HHHhcCCCEEEECCChHHhC-H-------HHHHhcCCCCEEEEe
Confidence 21235789988765443333 1 244578999444443
No 411
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=43.27 E-value=44 Score=34.19 Aligned_cols=76 Identities=14% Similarity=-0.014 Sum_probs=56.2
Q ss_pred CCCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc
Q 004178 530 SCATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF 606 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl 606 (770)
.+++.+|=-|.+.|. .+..|++.+ .+|+..|.+++.++.+.+.+.. ...++.++++|+.+.
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~G---a~Vvi~~~~~~~~~~~~~~l~~-------------~g~~~~~~~~Dv~~~ 70 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAG---ARVILNDIRATLLAESVDTLTR-------------KGYDAHGVAFDVTDE 70 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEECCSCHHHHHHHHHHHHH-------------TTCCEEECCCCTTCH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHh-------------cCCcEEEEEeeCCCH
Confidence 467888998988774 456778887 8999999999988877766642 124688888998764
Q ss_pred CC----------CCCCccEEEeccc
Q 004178 607 DS----------RLHGFDIGTCLEV 621 (770)
Q Consensus 607 p~----------~d~sFDlVVc~eV 621 (770)
.. ..+..|++|.+--
T Consensus 71 ~~v~~~~~~~~~~~G~iDiLVNNAG 95 (255)
T 4g81_D 71 LAIEAAFSKLDAEGIHVDILINNAG 95 (255)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCC
T ss_pred HHHHHHHHHHHHHCCCCcEEEECCC
Confidence 21 3468999998643
No 412
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=43.13 E-value=25 Score=37.33 Aligned_cols=46 Identities=15% Similarity=0.105 Sum_probs=37.2
Q ss_pred hhcCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 527 IKESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 527 L~~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
....++++||-+|+|. |.++..+++..+ .+|+++|.+++-++.+++
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAMG--AHVVAFTTSEAKREAAKA 236 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 3556789999999985 778888887553 679999999998888865
No 413
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=42.77 E-value=30 Score=36.38 Aligned_cols=46 Identities=13% Similarity=0.021 Sum_probs=35.0
Q ss_pred hhcC-CCCEEEEEcCc-cchHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 527 IKES-CATTLVDFGCG-SGSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 527 L~~~-~~~rVLDIGCG-tG~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
.... ++++||-+|+| .|.++..+++..+ .+|+++|.+++-++.+++
T Consensus 175 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~~~~~~~~~~~~ 222 (357)
T 2cf5_A 175 FGLKQPGLRGGILGLGGVGHMGVKIAKAMG--HHVTVISSSNKKREEALQ 222 (357)
T ss_dssp TSTTSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSTTHHHHHHT
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHH
Confidence 3455 78999999987 4677777777543 689999999887777753
No 414
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=42.75 E-value=28 Score=36.02 Aligned_cols=47 Identities=15% Similarity=0.155 Sum_probs=35.8
Q ss_pred HHhhcCCCCEEEEEcC--ccchHHHHHhcCCCCCceEEEEeCChHHHHHHH
Q 004178 525 QHIKESCATTLVDFGC--GSGSLLDSLLDYPTALEKIVGVDISQKSLSRAA 573 (770)
Q Consensus 525 ~~L~~~~~~rVLDIGC--GtG~ll~~LAk~ggp~~~VvGVDISeemLe~Ar 573 (770)
+..+..++++||-.|| |.|..+..+++..+ .+|+++|.+++.++.++
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~~~~~~~ 187 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKG--CKVVGAAGSDEKIAYLK 187 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH
Confidence 4445667899999998 56777766665443 69999999998888773
No 415
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=42.71 E-value=23 Score=37.39 Aligned_cols=51 Identities=22% Similarity=0.260 Sum_probs=38.3
Q ss_pred HHHHhhcCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 523 ALQHIKESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 523 Il~~L~~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
+.+..+..++++||-+|+|. |.++..+++..+ ..+|+++|.+++-++.+++
T Consensus 184 l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 184 AVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH
Confidence 33445566789999999874 777778887553 1389999999998888864
No 416
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=42.11 E-value=74 Score=33.50 Aligned_cols=162 Identities=11% Similarity=-0.019 Sum_probs=81.3
Q ss_pred CCEEEEEcCcc--chHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhccccc-CCCC-----CCCccEEEEECCc
Q 004178 532 ATTLVDFGCGS--GSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDA-AVPC-----TDVKSAVLFDGSI 603 (770)
Q Consensus 532 ~~rVLDIGCGt--G~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~-l~pr-----~~~~~Vef~~GDa 603 (770)
..+|.=||+|. +.++..|++.+ .+|+++|++++.++.+.+++........+. ..+. ....++++. .|+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G---~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~ 81 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGG---FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNL 81 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT---CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCH
Confidence 36788999995 34566677776 799999999999988876543322110000 0000 001123332 233
Q ss_pred cccCCCCCCccEEEeccccccCChh--HHHHHHHHHHHcccCCEEEEEecCCchhHHHhhhccccCCCCCchhhhhcccc
Q 004178 604 TVFDSRLHGFDIGTCLEVIEHMEED--EASQFGNIVLSSFRPRILIVSTPNYEYNAILQKSSSTIQEDDPDEKTQLQSCK 681 (770)
Q Consensus 604 edlp~~d~sFDlVVc~eVLEHL~~d--~~~~fleeI~rvLKPG~LIISTPN~efN~lf~~~~~~g~~e~pde~~~~~~~~ 681 (770)
.+. ....|+|+. -++++ ....+.+++...++|+.++++.-..-....+.... ..|.... ...
T Consensus 82 ~ea---v~~aDlVie-----avpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~~~-----~~~~r~i---g~H 145 (319)
T 2dpo_A 82 AEA---VEGVVHIQE-----CVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGL-----AHVKQCI---VAH 145 (319)
T ss_dssp HHH---TTTEEEEEE-----CCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTC-----TTGGGEE---EEE
T ss_pred HHH---HhcCCEEEE-----eccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHHhc-----CCCCCeE---Eee
Confidence 221 245677643 34432 23455567888999995444332221111222111 0011111 111
Q ss_pred ccCCCcc--------cccCHHHHHHHHHHHHHHCCcEEEE
Q 004178 682 FRNHDHK--------FEWTRDQFNCWATELAARHNYSVEF 713 (770)
Q Consensus 682 fRh~DHk--------fewTreEF~~Wa~~La~r~GY~VEF 713 (770)
+-++-+. ...|.++-.+.+..+.+..|-.+..
T Consensus 146 p~~P~~~~~lveiv~g~~t~~e~~~~~~~l~~~lGk~~v~ 185 (319)
T 2dpo_A 146 PVNPPYYIPLVELVPHPETSPATVDRTHALMRKIGQSPVR 185 (319)
T ss_dssp ECSSTTTCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCchhhcceEEEeCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 2222222 1235566666777888888877655
No 417
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=41.55 E-value=25 Score=37.17 Aligned_cols=51 Identities=25% Similarity=0.345 Sum_probs=38.3
Q ss_pred HHHHhhcCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 523 ALQHIKESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 523 Il~~L~~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
+.+.....++++||-+|+|. |.++..+++..+ ..+|+++|.+++-++.+++
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~ 234 (374)
T 2jhf_A 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVDINKDKFAKAKE 234 (374)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH
Confidence 33445566789999999875 777777877553 1389999999998888864
No 418
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=41.32 E-value=1.1e+02 Score=30.91 Aligned_cols=87 Identities=13% Similarity=0.248 Sum_probs=53.2
Q ss_pred CEEEEEcC-cc-c-hHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 533 TTLVDFGC-GS-G-SLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 533 ~rVLDIGC-Gt-G-~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
.+|.=||+ |. | .++..|++.+ .+|+++|.+++.++.+.+ . + +.. .+..+ .
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g---~~V~~~~r~~~~~~~~~~-~---------------g---~~~--~~~~~---~ 64 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSA---HHLAAIEIAPEGRDRLQG-M---------------G---IPL--TDGDG---W 64 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSS---SEEEEECCSHHHHHHHHH-T---------------T---CCC--CCSSG---G
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC---CEEEEEECCHHHHHHHHh-c---------------C---CCc--CCHHH---H
Confidence 48999999 85 3 3455666665 689999999887766543 1 1 111 12211 1
Q ss_pred CCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEec
Q 004178 610 LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTP 651 (770)
Q Consensus 610 d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTP 651 (770)
....|+|+.. ++++....+.+.+...++||.+++++-
T Consensus 65 ~~~aDvVi~a-----v~~~~~~~v~~~l~~~l~~~~ivv~~s 101 (286)
T 3c24_A 65 IDEADVVVLA-----LPDNIIEKVAEDIVPRVRPGTIVLILD 101 (286)
T ss_dssp GGTCSEEEEC-----SCHHHHHHHHHHHGGGSCTTCEEEESC
T ss_pred hcCCCEEEEc-----CCchHHHHHHHHHHHhCCCCCEEEECC
Confidence 2467887653 344444555666777888886666543
No 419
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=40.79 E-value=63 Score=31.18 Aligned_cols=71 Identities=11% Similarity=0.097 Sum_probs=46.7
Q ss_pred CCCEEEEEcCcc--ch-HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccE-EEEECCcc-c
Q 004178 531 CATTLVDFGCGS--GS-LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSA-VLFDGSIT-V 605 (770)
Q Consensus 531 ~~~rVLDIGCGt--G~-ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~V-ef~~GDae-d 605 (770)
.+++||=.|+.. |. ++..|++.+ .+|++++-+++.++.... .++ +++.+|+. .
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G---~~V~~~~R~~~~~~~~~~-------------------~~~~~~~~~Dl~~~ 77 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKG---HEPVAMVRNEEQGPELRE-------------------RGASDIVVANLEED 77 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSGGGHHHHHH-------------------TTCSEEEECCTTSC
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCC---CeEEEEECChHHHHHHHh-------------------CCCceEEEcccHHH
Confidence 478999999643 33 345556666 799999998875543322 257 88889986 2
Q ss_pred cCCCCCCccEEEeccccc
Q 004178 606 FDSRLHGFDIGTCLEVIE 623 (770)
Q Consensus 606 lp~~d~sFDlVVc~eVLE 623 (770)
+.....++|+|+......
T Consensus 78 ~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 78 FSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp CGGGGTTCSEEEECCCCC
T ss_pred HHHHHcCCCEEEECCCCC
Confidence 222346799999876543
No 420
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=40.79 E-value=21 Score=37.71 Aligned_cols=51 Identities=22% Similarity=0.251 Sum_probs=38.4
Q ss_pred HHHHhhcCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 523 ALQHIKESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 523 Il~~L~~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
+.+..+..++++||-+|+|. |.++..+++..+ ..+|+++|.+++-++.+++
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 183 AVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHHH
Confidence 33445566789999999874 777878887543 1389999999998888864
No 421
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=40.69 E-value=1.5e+02 Score=29.56 Aligned_cols=90 Identities=19% Similarity=0.145 Sum_probs=51.2
Q ss_pred CEEEEEcCcc-c-hHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCCC
Q 004178 533 TTLVDFGCGS-G-SLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSRL 610 (770)
Q Consensus 533 ~rVLDIGCGt-G-~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~d 610 (770)
.+|.=||+|. | .++..|++.+ ...+|+++|.+++.++.+++ . +... . ...|..+. .
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g-~~~~V~~~d~~~~~~~~~~~-~---------------g~~~-~-~~~~~~~~---~ 59 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSG-FKGKIYGYDINPESISKAVD-L---------------GIID-E-GTTSIAKV---E 59 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT-CCSEEEEECSCHHHHHHHHH-T---------------TSCS-E-EESCGGGG---G
T ss_pred cEEEEEecCHHHHHHHHHHHhcC-CCcEEEEEeCCHHHHHHHHH-C---------------CCcc-c-ccCCHHHH---h
Confidence 3688899985 3 3445565555 11389999999988776643 1 1100 1 11232221 2
Q ss_pred C-CccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEE
Q 004178 611 H-GFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVS 649 (770)
Q Consensus 611 ~-sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIIS 649 (770)
. ..|+|+.. +++.....+.+.+...++++.+++.
T Consensus 60 ~~~aDvVila-----vp~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 60 DFSPDFVMLS-----SPVRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp GTCCSEEEEC-----SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred cCCCCEEEEc-----CCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 3 67887553 4444444555567778899844443
No 422
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=40.68 E-value=3.6e+02 Score=31.90 Aligned_cols=162 Identities=15% Similarity=0.144 Sum_probs=86.9
Q ss_pred CCEEEEEcCccch--HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccc--cCCC-CCCCccEEEEECCcccc
Q 004178 532 ATTLVDFGCGSGS--LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLD--AAVP-CTDVKSAVLFDGSITVF 606 (770)
Q Consensus 532 ~~rVLDIGCGtG~--ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~--~l~p-r~~~~~Vef~~GDaedl 606 (770)
-++|--||+|.-. .+..++..+ ..|+-+|++++.++.+++.+......... .... .....++.+ ..|..++
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG---~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l 391 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVG---ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL 391 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT---CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEE-ESCGGGG
T ss_pred ccEEEEEcccHHHHHHHHHHHhCC---CchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcc-cCcHHHH
Confidence 3699999999743 455666766 89999999999999888765433211000 0000 111112222 2333332
Q ss_pred CCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEec-CCchhHHHhhhccccCCCCCchhhhhccccccCC
Q 004178 607 DSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTP-NYEYNAILQKSSSTIQEDDPDEKTQLQSCKFRNH 685 (770)
Q Consensus 607 p~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTP-N~efN~lf~~~~~~g~~e~pde~~~~~~~~fRh~ 685 (770)
...|+|+= .|+|-+. ....+.+++-.+++|+.++.+.- ...-..+-... ..|+... ...|-+|
T Consensus 392 ----~~aDlVIE-AV~E~l~--iK~~vf~~le~~~~~~aIlASNTSsl~i~~ia~~~------~~p~r~i---g~HFfnP 455 (742)
T 3zwc_A 392 ----STVDLVVE-AVFEDMN--LKKKVFAELSALCKPGAFLCTNTSALNVDDIASST------DRPQLVI---GTHFFSP 455 (742)
T ss_dssp ----GSCSEEEE-CCCSCHH--HHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHTTS------SCGGGEE---EEECCSS
T ss_pred ----hhCCEEEE-eccccHH--HHHHHHHHHhhcCCCCceEEecCCcCChHHHHhhc------CCccccc---cccccCC
Confidence 45676532 1334332 44566667999999995544433 22222222111 1222222 2234445
Q ss_pred Ccc--------cccCHHHHHHHHHHHHHHCCcEEEE
Q 004178 686 DHK--------FEWTRDQFNCWATELAARHNYSVEF 713 (770)
Q Consensus 686 DHk--------fewTreEF~~Wa~~La~r~GY~VEF 713 (770)
-|. ...|..+....+..++++.|-....
T Consensus 456 ~~~m~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~pV~ 491 (742)
T 3zwc_A 456 AHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVV 491 (742)
T ss_dssp TTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCceEEEecCCCCCHHHHHHHHHHHHHhCCCCcc
Confidence 443 2367677777777888888766543
No 423
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=40.65 E-value=78 Score=31.26 Aligned_cols=77 Identities=10% Similarity=0.065 Sum_probs=55.2
Q ss_pred CCCEEEEEcC-ccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc
Q 004178 531 CATTLVDFGC-GSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF 606 (770)
Q Consensus 531 ~~~rVLDIGC-GtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl 606 (770)
.++++|=.|+ |.|. ++..|++.+ .+|+.+|.+++.++.+.+.+.. ....++.++.+|+.+.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~------------~~~~~~~~~~~Dl~~~ 85 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEG---ADVVISDYHERRLGETRDQLAD------------LGLGRVEAVVCDVTST 85 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHT------------TCSSCEEEEECCTTCH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCC---CEEEEecCCHHHHHHHHHHHHh------------cCCCceEEEEeCCCCH
Confidence 5688999997 5543 566777877 8999999999888777665532 2235799999998764
Q ss_pred CC----------CCCCccEEEecccc
Q 004178 607 DS----------RLHGFDIGTCLEVI 622 (770)
Q Consensus 607 p~----------~d~sFDlVVc~eVL 622 (770)
.. ..+.+|+++.+..+
T Consensus 86 ~~v~~~~~~~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 86 EAVDALITQTVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCCcEEEECCCc
Confidence 32 12478999886554
No 424
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=40.48 E-value=67 Score=32.04 Aligned_cols=77 Identities=13% Similarity=0.025 Sum_probs=54.9
Q ss_pred CCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc-
Q 004178 531 CATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF- 606 (770)
Q Consensus 531 ~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl- 606 (770)
.+++||=.|++.|. ++..|++.+ .+|++++.+++.++.+.+.+.. ....++.++.+|+.+.
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G---~~V~~~~r~~~~~~~~~~~l~~------------~~~~~~~~~~~Dl~~~~ 75 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNG---IMVVLTCRDVTKGHEAVEKLKN------------SNHENVVFHQLDVTDPI 75 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHT------------TTCCSEEEEECCTTSCH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHh------------cCCCceEEEEccCCCcH
Confidence 46789999987663 456677776 7999999999887777665532 2234789999998875
Q ss_pred CC----------CCCCccEEEecccc
Q 004178 607 DS----------RLHGFDIGTCLEVI 622 (770)
Q Consensus 607 p~----------~d~sFDlVVc~eVL 622 (770)
.. ..+.+|+++.+-.+
T Consensus 76 ~~v~~~~~~~~~~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 76 ATMSSLADFIKTHFGKLDILVNNAGV 101 (311)
T ss_dssp HHHHHHHHHHHHHHSSCCEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCcc
Confidence 21 12579999987654
No 425
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=40.27 E-value=63 Score=33.23 Aligned_cols=89 Identities=19% Similarity=0.255 Sum_probs=51.4
Q ss_pred cCCCCEEEEEcCcc-chHH-HHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE-CCccc
Q 004178 529 ESCATTLVDFGCGS-GSLL-DSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD-GSITV 605 (770)
Q Consensus 529 ~~~~~rVLDIGCGt-G~ll-~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~-GDaed 605 (770)
...+++|+=+|+|. |... ..+...+ .+|+++|.+++..+.+.+ + .++... .++.+
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G---~~V~~~d~~~~~~~~~~~-~------------------g~~~~~~~~l~~ 211 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALG---ANVKVGARSSAHLARITE-M------------------GLVPFHTDELKE 211 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHH-T------------------TCEEEEGGGHHH
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHH-C------------------CCeEEchhhHHH
Confidence 34678999999984 4433 3334444 699999999865544322 1 112211 12222
Q ss_pred cCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEe
Q 004178 606 FDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVST 650 (770)
Q Consensus 606 lp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIIST 650 (770)
.....|+|+..--.+.+. + .....+|||.+++.+
T Consensus 212 ---~l~~aDvVi~~~p~~~i~-~-------~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 212 ---HVKDIDICINTIPSMILN-Q-------TVLSSMTPKTLILDL 245 (300)
T ss_dssp ---HSTTCSEEEECCSSCCBC-H-------HHHTTSCTTCEEEEC
T ss_pred ---HhhCCCEEEECCChhhhC-H-------HHHHhCCCCCEEEEE
Confidence 235789998766554333 1 245688999555543
No 426
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=40.11 E-value=26 Score=36.99 Aligned_cols=51 Identities=22% Similarity=0.271 Sum_probs=38.4
Q ss_pred HHHHhhcCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 523 ALQHIKESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 523 Il~~L~~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
+.+..+..++++||-+|+|. |.++..+++..+ ..+|+++|.+++-++.+++
T Consensus 187 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~ 238 (376)
T 1e3i_A 187 AINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGEKFPKAKA 238 (376)
T ss_dssp HHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGGGHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH
Confidence 33445566789999999874 777888887653 1389999999988888864
No 427
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=39.54 E-value=19 Score=34.21 Aligned_cols=47 Identities=13% Similarity=-0.000 Sum_probs=34.0
Q ss_pred HHhhcCCCCEEEEEcC--ccchHHHHHhcCCCCCceEEEEeCChHHHHHHH
Q 004178 525 QHIKESCATTLVDFGC--GSGSLLDSLLDYPTALEKIVGVDISQKSLSRAA 573 (770)
Q Consensus 525 ~~L~~~~~~rVLDIGC--GtG~ll~~LAk~ggp~~~VvGVDISeemLe~Ar 573 (770)
+.....++++||..|+ |.|..+..+++..+ .+|+++|.+++.++.++
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIG--ARIYTTAGSDAKREMLS 80 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHH
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHH
Confidence 3345567899999995 55776666665432 78999999998877664
No 428
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=39.32 E-value=34 Score=35.90 Aligned_cols=50 Identities=20% Similarity=0.147 Sum_probs=39.2
Q ss_pred HHhhcCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHHH
Q 004178 525 QHIKESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAKI 575 (770)
Q Consensus 525 ~~L~~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Arkr 575 (770)
+..+..++++||-+|+|. |.++..+++..+ ..+|+++|.+++-++.+++.
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAG-ACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEEESCHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHh
Confidence 455667789999999975 788888887653 23499999999999988763
No 429
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=39.09 E-value=69 Score=31.25 Aligned_cols=75 Identities=15% Similarity=0.164 Sum_probs=52.5
Q ss_pred cCCCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccc
Q 004178 529 ESCATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITV 605 (770)
Q Consensus 529 ~~~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaed 605 (770)
..++++||=.|++.|. ++..|++.+ .+|+.+|.+++.++...+.+. .++.+..+|+.+
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~D~~~ 71 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLG---SKVIISGSNEEKLKSLGNALK----------------DNYTIEVCNLAN 71 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHC----------------SSEEEEECCTTS
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHhc----------------cCccEEEcCCCC
Confidence 3467899999987663 456677776 899999999888776655431 367888888765
Q ss_pred cCC------CCCCccEEEecccc
Q 004178 606 FDS------RLHGFDIGTCLEVI 622 (770)
Q Consensus 606 lp~------~d~sFDlVVc~eVL 622 (770)
... ..+..|+++.+..+
T Consensus 72 ~~~~~~~~~~~~~id~li~~Ag~ 94 (249)
T 3f9i_A 72 KEECSNLISKTSNLDILVCNAGI 94 (249)
T ss_dssp HHHHHHHHHTCSCCSEEEECCC-
T ss_pred HHHHHHHHHhcCCCCEEEECCCC
Confidence 321 23578999886543
No 430
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=38.64 E-value=34 Score=36.81 Aligned_cols=44 Identities=16% Similarity=0.172 Sum_probs=31.2
Q ss_pred CCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHHH
Q 004178 530 SCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAKI 575 (770)
Q Consensus 530 ~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Arkr 575 (770)
..+++|+=+|+|. |..+..+++..+ .+|+++|.+++.++.+++.
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~G--a~V~~~d~~~~~l~~~~~~ 210 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMG--ATVTVLDINIDKLRQLDAE 210 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHh
Confidence 3578999999973 444444444332 6899999999888777653
No 431
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=38.39 E-value=49 Score=33.14 Aligned_cols=76 Identities=12% Similarity=0.044 Sum_probs=52.2
Q ss_pred CCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 531 CATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
.++++|=.|++.|. ++..|++.+ .+|+.+|.+++.++.+.+.+.. ...++.++.+|+.+..
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~D~~~~~ 83 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLG---ARVYTCSRNEKELDECLEIWRE-------------KGLNVEGSVCDLLSRT 83 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH-------------TTCCEEEEECCTTCHH
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHh-------------cCCceEEEECCCCCHH
Confidence 46889999986653 455667776 7999999998877665554421 1236888899987643
Q ss_pred C----------CC-CCccEEEecccc
Q 004178 608 S----------RL-HGFDIGTCLEVI 622 (770)
Q Consensus 608 ~----------~d-~sFDlVVc~eVL 622 (770)
. .. +.+|+++.+..+
T Consensus 84 ~~~~~~~~~~~~~~g~id~lv~nAg~ 109 (273)
T 1ae1_A 84 ERDKLMQTVAHVFDGKLNILVNNAGV 109 (273)
T ss_dssp HHHHHHHHHHHHTTSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCcEEEECCCC
Confidence 1 11 678999886543
No 432
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=38.34 E-value=12 Score=41.01 Aligned_cols=42 Identities=14% Similarity=0.152 Sum_probs=31.1
Q ss_pred CCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 531 CATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 531 ~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
++.+|+=+|+|. |..+..+++..+ .+|+++|.++.-++.+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG--a~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG--AKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT--CEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 578999999994 555544444333 689999999988777754
No 433
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=38.24 E-value=1.7e+02 Score=29.43 Aligned_cols=80 Identities=14% Similarity=0.078 Sum_probs=49.3
Q ss_pred CCCEEEEEcCcc--ch-HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEE-ECCcccc
Q 004178 531 CATTLVDFGCGS--GS-LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLF-DGSITVF 606 (770)
Q Consensus 531 ~~~rVLDIGCGt--G~-ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~-~GDaedl 606 (770)
++++||=.|+.. |. ++..|++.+ .+|++++-++...+...+.+... ...+++++ .+|+.+.
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~~D~~d~ 74 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHG---YKVRGTARSASKLANLQKRWDAK------------YPGRFETAVVEDMLKQ 74 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHHHHHH------------STTTEEEEECSCTTST
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEeCCcccHHHHHHHhhcc------------CCCceEEEEecCCcCh
Confidence 467899999642 32 334555665 79999999877655443332110 11368888 7898764
Q ss_pred CC---CCCCccEEEeccccccC
Q 004178 607 DS---RLHGFDIGTCLEVIEHM 625 (770)
Q Consensus 607 p~---~d~sFDlVVc~eVLEHL 625 (770)
.. ....+|+|+......+.
T Consensus 75 ~~~~~~~~~~d~vih~A~~~~~ 96 (342)
T 1y1p_A 75 GAYDEVIKGAAGVAHIASVVSF 96 (342)
T ss_dssp TTTTTTTTTCSEEEECCCCCSC
T ss_pred HHHHHHHcCCCEEEEeCCCCCC
Confidence 32 23478999887655443
No 434
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=38.21 E-value=24 Score=37.13 Aligned_cols=51 Identities=25% Similarity=0.343 Sum_probs=38.3
Q ss_pred HHHHhhcCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 523 ALQHIKESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 523 Il~~L~~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
+.+..+..++++||-+|+|. |.++..+++..+ ..+|+++|.+++-++.+++
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~~~~~~~~ 233 (373)
T 2fzw_A 182 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKDKFARAKE 233 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGGGHHHHHH
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH
Confidence 33445566789999999875 777777777543 1389999999998888864
No 435
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=37.85 E-value=1.1e+02 Score=29.70 Aligned_cols=75 Identities=12% Similarity=0.196 Sum_probs=49.0
Q ss_pred CCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC
Q 004178 532 ATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS 608 (770)
Q Consensus 532 ~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~ 608 (770)
++++|=.|++.|. ++..|++.+ .+|+.+|.+++.++...+.+.. ....++.++.+|+.+...
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~------------~~~~~~~~~~~D~~~~~~ 66 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARG---DRVAALDLSAETLEETARTHWH------------AYADKVLRVRADVADEGD 66 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHST------------TTGGGEEEEECCTTCHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHH------------hcCCcEEEEEecCCCHHH
Confidence 4678888876542 445666666 7899999998777665443310 112468899999876432
Q ss_pred ----------CCCCccEEEeccc
Q 004178 609 ----------RLHGFDIGTCLEV 621 (770)
Q Consensus 609 ----------~d~sFDlVVc~eV 621 (770)
..+.+|+|+....
T Consensus 67 ~~~~~~~~~~~~~~id~li~~Ag 89 (250)
T 2cfc_A 67 VNAAIAATMEQFGAIDVLVNNAG 89 (250)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCC
Confidence 0137899988654
No 436
>1x49_A Interferon-induced, double-stranded RNA- activated protein kinase; structure genomics, DSRM domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.50.1.1
Probab=37.76 E-value=26 Score=30.91 Aligned_cols=68 Identities=21% Similarity=0.226 Sum_probs=45.8
Q ss_pred ChhhHHHhhhhhcccCcceeecccCCccccccchhhhhhhhhcccccccccccCCCcccCCCceeeEEEEeeccCCcccc
Q 004178 212 FPREMLFMFCRQHWLSEPVFSTCSNSLKESSESSRFYEKSAALESAETGKECTSGGGTAASDNVRCEVKIFSKSRDPILE 291 (770)
Q Consensus 212 ~p~~~l~~fc~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 291 (770)
-|+..|-.+|..+++. |.|... . .. |......|.|+|.|-.+.
T Consensus 15 n~Kt~LqE~~Q~~~~~-p~Y~~~--~--------------------------~~--Gp~H~~~F~v~v~i~g~~------ 57 (97)
T 1x49_A 15 FYMDKLNKYRQMHGVA-ITYKEL--S--------------------------TS--GPPHDRRFTFQVLIDEKE------ 57 (97)
T ss_dssp HHHHHHHHHHHHHTCC-EEEEEE--E--------------------------EE--SCSSSCEEEEEEEESSCC------
T ss_pred CHHHHHHHHHHHcCCC-CeEEEE--E--------------------------ee--CCCCCCcEEEEEEECCEE------
Confidence 4788999999998885 877654 0 01 222234499999985421
Q ss_pred cCchhhhhhhhhhHhhhhhHHHHHHH
Q 004178 292 CSPKEFYKKQNESIENASLKVLSWLN 317 (770)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~l~~l~~~~ 317 (770)
+ ....-+..-+|=|+||.++|..|.
T Consensus 58 ~-~~G~G~SKK~Aeq~AA~~AL~~L~ 82 (97)
T 1x49_A 58 F-PEAKGRSKQEARNAAAKLAVDILD 82 (97)
T ss_dssp C-CCEEESSHHHHHHHHHHHHHHHHT
T ss_pred E-EEEeeCCHHHHHHHHHHHHHHHHH
Confidence 1 223446667899999999998774
No 437
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=37.36 E-value=67 Score=32.44 Aligned_cols=79 Identities=10% Similarity=0.058 Sum_probs=54.0
Q ss_pred hcCCCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeC-ChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCc
Q 004178 528 KESCATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDI-SQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSI 603 (770)
Q Consensus 528 ~~~~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDI-SeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDa 603 (770)
....++++|=.|++.|. ++..|++.+ .+|+.+|. +++.++...+.+.. ...++.++++|+
T Consensus 25 ~~~~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~Dv 88 (280)
T 4da9_A 25 TQKARPVAIVTGGRRGIGLGIARALAASG---FDIAITGIGDAEGVAPVIAELSG-------------LGARVIFLRADL 88 (280)
T ss_dssp SCCCCCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCCHHHHHHHHHHHHH-------------TTCCEEEEECCT
T ss_pred hccCCCEEEEecCCCHHHHHHHHHHHHCC---CeEEEEeCCCHHHHHHHHHHHHh-------------cCCcEEEEEecC
Confidence 44567899999987764 556777777 89999996 66666655554431 124689999998
Q ss_pred cccCCC----------CCCccEEEecccc
Q 004178 604 TVFDSR----------LHGFDIGTCLEVI 622 (770)
Q Consensus 604 edlp~~----------d~sFDlVVc~eVL 622 (770)
.+...- .+..|+++.+..+
T Consensus 89 ~d~~~v~~~~~~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 89 ADLSSHQATVDAVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp TSGGGHHHHHHHHHHHHSCCCEEEEECC-
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 875431 2478999886544
No 438
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=37.27 E-value=67 Score=32.81 Aligned_cols=75 Identities=12% Similarity=0.131 Sum_probs=56.4
Q ss_pred CCCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc
Q 004178 530 SCATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF 606 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl 606 (770)
.+++.+|=-|.+.|. .+..|++.+ .+|+.+|.+++.++.+.+.+.. ...++.++++|+.+.
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~G---a~Vv~~~~~~~~~~~~~~~i~~-------------~g~~~~~~~~Dvt~~ 68 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALND---SIVVAVELLEDRLNQIVQELRG-------------MGKEVLGVKADVSKK 68 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH-------------TTCCEEEEECCTTSH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHh-------------cCCcEEEEEccCCCH
Confidence 357899999988775 456777877 8999999999998887776642 124688999998764
Q ss_pred CC----------CCCCccEEEecc
Q 004178 607 DS----------RLHGFDIGTCLE 620 (770)
Q Consensus 607 p~----------~d~sFDlVVc~e 620 (770)
.. ..+..|++|.+-
T Consensus 69 ~~v~~~~~~~~~~~G~iDiLVNNA 92 (254)
T 4fn4_A 69 KDVEEFVRRTFETYSRIDVLCNNA 92 (254)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECC
Confidence 32 236799998754
No 439
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=37.06 E-value=1.1e+02 Score=34.12 Aligned_cols=100 Identities=19% Similarity=0.258 Sum_probs=59.2
Q ss_pred CEEEEEcCcc--chHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCC---------CccEEEEEC
Q 004178 533 TTLVDFGCGS--GSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTD---------VKSAVLFDG 601 (770)
Q Consensus 533 ~rVLDIGCGt--G~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~---------~~~Vef~~G 601 (770)
.+|.=||+|. +.++..+++.+ .+|+++|.+++.++.+.+.+......... ... ..++++. .
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG---~~V~l~D~~~e~l~~~~~~i~~~l~~~~~----~g~~~~~~~~~~~~~i~~~-~ 77 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHG---HQVLLYDISAEALTRAIDGIHARLNSRVT----RGKLTAETCERTLKRLIPV-T 77 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCEEEECSCHHHHHHHHHHHHHHHHTTTT----TTSSCHHHHHHHHHTEEEE-C
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHHHHHHHHH----cCCCCHHHHHHHHhceeEe-C
Confidence 4678889986 34566677776 78999999999999987765433221100 010 0133332 2
Q ss_pred CccccCCCCCCccEEEeccccccCChh--HHHHHHHHHHHcccCCEEEEE
Q 004178 602 SITVFDSRLHGFDIGTCLEVIEHMEED--EASQFGNIVLSSFRPRILIVS 649 (770)
Q Consensus 602 Daedlp~~d~sFDlVVc~eVLEHL~~d--~~~~fleeI~rvLKPG~LIIS 649 (770)
|.+. ....|+|+.. ++++ ....+.+++...++|+.++++
T Consensus 78 ~~~~----~~~aDlVIeA-----Vpe~~~vk~~v~~~l~~~~~~~~Ilas 118 (483)
T 3mog_A 78 DIHA----LAAADLVIEA-----ASERLEVKKALFAQLAEVCPPQTLLTT 118 (483)
T ss_dssp CGGG----GGGCSEEEEC-----CCCCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CHHH----hcCCCEEEEc-----CCCcHHHHHHHHHHHHHhhccCcEEEe
Confidence 3322 2456887543 3332 234555678889999955543
No 440
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=36.77 E-value=1e+02 Score=30.60 Aligned_cols=90 Identities=14% Similarity=0.145 Sum_probs=53.3
Q ss_pred CEEEEEcCcc-ch-HHHHHhcCCCCCce-EEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 533 TTLVDFGCGS-GS-LLDSLLDYPTALEK-IVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 533 ~rVLDIGCGt-G~-ll~~LAk~ggp~~~-VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
.+|.=||||. |. ++..|++.+ .+ |+.+|.+++.++.+.+.+ .+.. ..+..+.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g---~~~v~~~~~~~~~~~~~~~~~------------------g~~~-~~~~~~~--- 65 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKG---FRIVQVYSRTEESARELAQKV------------------EAEY-TTDLAEV--- 65 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT---CCEEEEECSSHHHHHHHHHHT------------------TCEE-ESCGGGS---
T ss_pred CeEEEEcCCHHHHHHHHHHHHCC---CeEEEEEeCCHHHHHHHHHHc------------------CCce-eCCHHHH---
Confidence 5788999984 33 344555554 45 899999998877665432 1222 2233322
Q ss_pred CCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEecC
Q 004178 610 LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPN 652 (770)
Q Consensus 610 d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTPN 652 (770)
....|+|+.. ++++....+.+.+...+++|.+++++-+
T Consensus 66 ~~~~Dvvi~a-----v~~~~~~~v~~~l~~~~~~~~ivv~~s~ 103 (266)
T 3d1l_A 66 NPYAKLYIVS-----LKDSAFAELLQGIVEGKREEALMVHTAG 103 (266)
T ss_dssp CSCCSEEEEC-----CCHHHHHHHHHHHHTTCCTTCEEEECCT
T ss_pred hcCCCEEEEe-----cCHHHHHHHHHHHHhhcCCCcEEEECCC
Confidence 2357887553 3433344555567778888965665544
No 441
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=36.69 E-value=78 Score=31.32 Aligned_cols=75 Identities=13% Similarity=0.075 Sum_probs=53.8
Q ss_pred CCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 531 CATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
.++++|=.|++.|. ++..|++.+ .+|+.+|.+++.++.+.+.+. ....++.++.+|+.+..
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~~~~~Dv~~~~ 68 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEG---ARVVITGRTKEKLEEAKLEIE-------------QFPGQILTVQMDVRNTD 68 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHC-------------CSTTCEEEEECCTTCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHH-------------hcCCcEEEEEccCCCHH
Confidence 46788988987653 456677777 799999999988887766552 12347889999987643
Q ss_pred C----------CCCCccEEEeccc
Q 004178 608 S----------RLHGFDIGTCLEV 621 (770)
Q Consensus 608 ~----------~d~sFDlVVc~eV 621 (770)
. ..+..|+++.+-.
T Consensus 69 ~v~~~~~~~~~~~g~id~lv~nAg 92 (257)
T 3imf_A 69 DIQKMIEQIDEKFGRIDILINNAA 92 (257)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCC
Confidence 2 1247899987654
No 442
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=36.34 E-value=88 Score=32.25 Aligned_cols=102 Identities=14% Similarity=0.096 Sum_probs=54.9
Q ss_pred CEEEEEcCcc-c-hHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCC--ccEEEEECCccccCC
Q 004178 533 TTLVDFGCGS-G-SLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDV--KSAVLFDGSITVFDS 608 (770)
Q Consensus 533 ~rVLDIGCGt-G-~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~--~~Vef~~GDaedlp~ 608 (770)
.+|.=||+|. | .++..|++.+ .+|+++|.+++.++..++...-.... .... .++.....|..+.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~-- 72 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKG---QSVLAWDIDAQRIKEIQDRGAIIAEG-------PGLAGTAHPDLLTSDIGLA-- 72 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHHTSEEEES-------SSCCEEECCSEEESCHHHH--
T ss_pred CeEEEECCCHHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHhcCCeEEec-------cccccccccceecCCHHHH--
Confidence 5899999986 3 3455666665 78999999988777665421000000 0000 0000111222211
Q ss_pred CCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEecC
Q 004178 609 RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPN 652 (770)
Q Consensus 609 ~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTPN 652 (770)
...+|+|+..--- .....+.+.+...+++|.+++..++
T Consensus 73 -~~~~D~vi~~v~~-----~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 73 -VKDADVILIVVPA-----IHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp -HTTCSEEEECSCG-----GGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred -HhcCCEEEEeCCc-----hHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 2468887654322 2233445568888999955666666
No 443
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=36.15 E-value=53 Score=34.95 Aligned_cols=43 Identities=19% Similarity=0.151 Sum_probs=30.8
Q ss_pred CCCEEEEEcCc-cchHHHHHhcCCCCCceEEEEeCChHHHHHHHHH
Q 004178 531 CATTLVDFGCG-SGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKI 575 (770)
Q Consensus 531 ~~~rVLDIGCG-tG~ll~~LAk~ggp~~~VvGVDISeemLe~Arkr 575 (770)
++++|+=+|+| .|..+..+++..+ .+|+++|.+++-++.+++.
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~G--a~V~v~dr~~~r~~~~~~~ 209 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLG--AQVQIFDINVERLSYLETL 209 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHh
Confidence 45899999997 3444444444332 5999999999888877654
No 444
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=35.89 E-value=18 Score=40.03 Aligned_cols=42 Identities=14% Similarity=0.133 Sum_probs=31.8
Q ss_pred CCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 531 CATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 531 ~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
++.+|+=+|+|. |..+..+++..+ .+|+++|.++.-++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lG--a~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLG--AVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHH
Confidence 578999999994 555555555433 799999999988877754
No 445
>2dmy_A Spermatid perinuclear RNA-binding protein; DSRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=35.58 E-value=28 Score=30.62 Aligned_cols=72 Identities=10% Similarity=0.044 Sum_probs=49.2
Q ss_pred cccCCCChhhHHHhhhhhcccCcceeecccCCccccccchhhhhhhhhcccccccccccCCCcccCCCceeeEEEEeecc
Q 004178 206 TNWRGSFPREMLFMFCRQHWLSEPVFSTCSNSLKESSESSRFYEKSAALESAETGKECTSGGGTAASDNVRCEVKIFSKS 285 (770)
Q Consensus 206 ~~w~g~~p~~~l~~fc~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 285 (770)
-+|..--|...|..+|..+ ..|.|... . .. |......|.|+|.|-.+.
T Consensus 11 ~~~~~~d~Kt~LqE~~Q~~--~~p~Y~~~--------~--------------------~~--Gp~H~~~F~~~v~v~g~~ 58 (97)
T 2dmy_A 11 LDSKAIDLMNALMRLNQIR--PGLQYKLL--------S--------------------QS--GPVHAPVFTMSVDVDGTT 58 (97)
T ss_dssp CCCCSSSCTHHHHHHHHHS--CSCCCEEE--------E--------------------EE--SCSSSCEEEEEEEETTEE
T ss_pred ccCCCCCHHHHHHHHHhcC--CCceEEEE--------E--------------------ee--CCCCCCeEEEEEEECCEE
Confidence 3688888999999999874 56766654 0 01 222234499999985432
Q ss_pred CCcccccCchhhhhhhhhhHhhhhhHHHHHHH
Q 004178 286 RDPILECSPKEFYKKQNESIENASLKVLSWLN 317 (770)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 317 (770)
+. ..=+..-+|=|+||.++|.-|.
T Consensus 59 ------~~--G~G~SKK~Aeq~AA~~aL~~L~ 82 (97)
T 2dmy_A 59 ------YE--ASGPSKKTAKLHVAVKVLQAMG 82 (97)
T ss_dssp ------EE--EEESSHHHHHHHHHHHHHHHHT
T ss_pred ------EE--EeeCCHHHHHHHHHHHHHHHhC
Confidence 22 2335667899999999998773
No 446
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=35.29 E-value=20 Score=37.95 Aligned_cols=51 Identities=24% Similarity=0.340 Sum_probs=39.0
Q ss_pred HHHHhhcCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 523 ALQHIKESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 523 Il~~L~~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
+.+.....++++||-+|+|. |.++..+++..+ ..+|+++|.+++-++.|++
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~~a~~ 236 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYETAKK 236 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHHHHHT
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH
Confidence 44555666789999999974 788888887653 2389999999998888764
No 447
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=35.28 E-value=50 Score=34.96 Aligned_cols=49 Identities=14% Similarity=0.080 Sum_probs=38.8
Q ss_pred HHhhcCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 525 QHIKESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 525 ~~L~~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
+.....++++||-+|+|. |.++..+++..+ ..+|+++|.+++-++.+++
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~ 225 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATKRRLAEE 225 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH
Confidence 455667789999999975 778888887653 2389999999998888865
No 448
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=35.22 E-value=32 Score=35.61 Aligned_cols=51 Identities=16% Similarity=0.130 Sum_probs=38.9
Q ss_pred HHHHHhhcCCCCEEEEEcC--ccchHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 522 YALQHIKESCATTLVDFGC--GSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 522 ~Il~~L~~~~~~rVLDIGC--GtG~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
.+.+..+..++++||-.|+ |.|..+..+++..+ .+|+++|.+++-++.+.+
T Consensus 140 al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~ 192 (336)
T 4b7c_A 140 ALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKG--CRVVGIAGGAEKCRFLVE 192 (336)
T ss_dssp HHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 3435556677899999998 56778777776553 699999999988887743
No 449
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=34.97 E-value=75 Score=32.46 Aligned_cols=78 Identities=19% Similarity=0.100 Sum_probs=56.4
Q ss_pred cCCCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccc
Q 004178 529 ESCATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITV 605 (770)
Q Consensus 529 ~~~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaed 605 (770)
...+++||=.|++.|. ++..|++.+ .+|+.+|.+++.++.+.+.+.. ...++.++.+|+.+
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~-------------~~~~~~~~~~Dv~d 91 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRG---ARLVLSDVDQPALEQAVNGLRG-------------QGFDAHGVVCDVRH 91 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH-------------TTCCEEEEECCTTC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHh-------------cCCceEEEEccCCC
Confidence 3467899999998763 556777777 7999999999888877665532 12468899999876
Q ss_pred cCC----------CCCCccEEEecccc
Q 004178 606 FDS----------RLHGFDIGTCLEVI 622 (770)
Q Consensus 606 lp~----------~d~sFDlVVc~eVL 622 (770)
... ..+..|+++.+-.+
T Consensus 92 ~~~v~~~~~~~~~~~g~id~lvnnAg~ 118 (301)
T 3tjr_A 92 LDEMVRLADEAFRLLGGVDVVFSNAGI 118 (301)
T ss_dssp HHHHHHHHHHHHHHHSSCSEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEECCCc
Confidence 432 12478999986543
No 450
>2b7v_A Double-stranded RNA-specific editase 1; RNA editing, RNA-binding protein, hydrolase; NMR {Rattus norvegicus} SCOP: d.50.1.1 PDB: 2l2k_B
Probab=34.67 E-value=55 Score=26.79 Aligned_cols=39 Identities=8% Similarity=-0.003 Sum_probs=27.5
Q ss_pred CCceeeEEEEeeccCCcccccCchhhhhhhhhhHhhhhhHHHHHHHh
Q 004178 272 SDNVRCEVKIFSKSRDPILECSPKEFYKKQNESIENASLKVLSWLNA 318 (770)
Q Consensus 272 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 318 (770)
...|.|+|.|-.+ . ++ ..=+..-+|=|+||.++|..|..
T Consensus 30 ~~~F~~~v~v~~~----~--~~--G~G~SKK~Aeq~AA~~al~~L~~ 68 (71)
T 2b7v_A 30 AKSFVMSVVVDGQ----F--FE--GSGRNKKLAKARAAQSALATVFN 68 (71)
T ss_dssp TCCEEEEEECSSC----E--EE--EEESSHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEECCE----E--EE--EeeCCHHHHHHHHHHHHHHHHHh
Confidence 3459999998542 1 32 23355678999999999988753
No 451
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=34.38 E-value=41 Score=32.75 Aligned_cols=76 Identities=17% Similarity=0.076 Sum_probs=49.4
Q ss_pred CCCEEEEEcCccc---hHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 531 CATTLVDFGCGSG---SLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG---~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
.+++||=.|++.| .++..|++.+ .+|+++|.+++.++...+.+.. ...++.++.+|+.+..
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~D~~~~~ 73 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAG---ASVVVSDINADAANHVVDEIQQ-------------LGGQAFACRCDITSEQ 73 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTT---CEEEEEESCHHHHHHHHHHHHH-------------TTCCEEEEECCTTCHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHHHHH-------------hCCceEEEEcCCCCHH
Confidence 4678888886544 2345566666 7999999998776655544421 1236888899987643
Q ss_pred C----------CCCCccEEEecccc
Q 004178 608 S----------RLHGFDIGTCLEVI 622 (770)
Q Consensus 608 ~----------~d~sFDlVVc~eVL 622 (770)
. ..+.+|+|+....+
T Consensus 74 ~~~~~~~~~~~~~~~~d~vi~~Ag~ 98 (255)
T 1fmc_A 74 ELSALADFAISKLGKVDILVNNAGG 98 (255)
T ss_dssp HHHHHHHHHHHHHSSCCEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCC
Confidence 2 01378999876543
No 452
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=34.35 E-value=49 Score=34.41 Aligned_cols=46 Identities=22% Similarity=0.304 Sum_probs=36.8
Q ss_pred hcCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 528 KESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 528 ~~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
...++++||-+|+|. |.++..+++..+ ..+|+++|.+++-++.+++
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~~ 214 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALARE 214 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH
Confidence 456789999999975 778888887531 2799999999999988865
No 453
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=34.27 E-value=1.2e+02 Score=30.66 Aligned_cols=76 Identities=14% Similarity=0.081 Sum_probs=54.4
Q ss_pred CCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 531 CATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
.++++|=.|++.|. ++..|++.+ .+|+.+|.+++.++.+.+.+. ....++.++.+|+.+..
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~l~-------------~~~~~~~~~~~Dv~d~~ 90 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADG---VTVGALGRTRTEVEEVADEIV-------------GAGGQAIALEADVSDEL 90 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHHHT-------------TTTCCEEEEECCTTCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHH-------------hcCCcEEEEEccCCCHH
Confidence 56889999987764 456677777 899999999988877766552 12346889999987643
Q ss_pred C----------CCCCccEEEecccc
Q 004178 608 S----------RLHGFDIGTCLEVI 622 (770)
Q Consensus 608 ~----------~d~sFDlVVc~eVL 622 (770)
. ..+..|+++.+..+
T Consensus 91 ~v~~~~~~~~~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 91 QMRNAVRDLVLKFGHLDIVVANAGI 115 (283)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCC
Confidence 1 12479999886543
No 454
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=34.26 E-value=32 Score=34.23 Aligned_cols=93 Identities=15% Similarity=0.219 Sum_probs=51.1
Q ss_pred CEEEEEcCcc-c-hHHHHHhcCC-CCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 533 TTLVDFGCGS-G-SLLDSLLDYP-TALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 533 ~rVLDIGCGt-G-~ll~~LAk~g-gp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
.+|.=||||. | .++..|++.+ .+..+|+++|.+++.++...+.+ .+.. ..|..+.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~------------------g~~~-~~~~~e~--- 60 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY------------------GLTT-TTDNNEV--- 60 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH------------------CCEE-CSCHHHH---
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh------------------CCEE-eCChHHH---
Confidence 4678899995 2 3556666665 01238999999998877765432 1111 1122111
Q ss_pred CCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEecC
Q 004178 610 LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPN 652 (770)
Q Consensus 610 d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTPN 652 (770)
....|+|+..- ++.....+.+.+...++||.++++..+
T Consensus 61 ~~~aDvVilav-----~~~~~~~v~~~l~~~l~~~~~vvs~~~ 98 (247)
T 3gt0_A 61 AKNADILILSI-----KPDLYASIINEIKEIIKNDAIIVTIAA 98 (247)
T ss_dssp HHHCSEEEECS-----CTTTHHHHC---CCSSCTTCEEEECSC
T ss_pred HHhCCEEEEEe-----CHHHHHHHHHHHHhhcCCCCEEEEecC
Confidence 12468776543 333444555567777888855555444
No 455
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=33.82 E-value=95 Score=31.24 Aligned_cols=76 Identities=17% Similarity=0.053 Sum_probs=53.5
Q ss_pred CCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 531 CATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
.++++|=.|++.|. ++..|++.+ .+|+.+|.+++.++.+.+.+.. ...++.++.+|+.+..
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~r~~~~~~~~~~~l~~-------------~~~~~~~~~~Dv~d~~ 86 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARG---IAVYGCARDAKNVSAAVDGLRA-------------AGHDVDGSSCDVTSTD 86 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHT-------------TTCCEEEEECCTTCHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHh-------------cCCcEEEEECCCCCHH
Confidence 36789999987663 456777777 8999999999888777665531 2346889999987643
Q ss_pred C----------CCCCccEEEecccc
Q 004178 608 S----------RLHGFDIGTCLEVI 622 (770)
Q Consensus 608 ~----------~d~sFDlVVc~eVL 622 (770)
. ..+..|+++.+..+
T Consensus 87 ~v~~~~~~~~~~~g~id~lv~nAg~ 111 (279)
T 3sju_A 87 EVHAAVAAAVERFGPIGILVNSAGR 111 (279)
T ss_dssp HHHHHHHHHHHHHCSCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCC
Confidence 2 12478999886543
No 456
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=33.81 E-value=22 Score=36.99 Aligned_cols=50 Identities=16% Similarity=0.260 Sum_probs=39.1
Q ss_pred HHHHhhcCCCCEEEEEcCc--cchHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 523 ALQHIKESCATTLVDFGCG--SGSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 523 Il~~L~~~~~~rVLDIGCG--tG~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
+.+.....++++||-+|+| .|..+..+++..+ .+|+++|.+++-++.+++
T Consensus 136 ~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 136 CTETLNLQRNDVLLVNACGSAIGHLFAQLSQILN--FRLIAVTRNNKHTEELLR 187 (340)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH
T ss_pred HHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh
Confidence 3455566778999999987 6777777777543 799999999988888865
No 457
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=33.81 E-value=56 Score=32.46 Aligned_cols=76 Identities=9% Similarity=-0.060 Sum_probs=54.7
Q ss_pred CCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 531 CATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
.++++|=.|++.|. ++..|++.+ .+|+.+|.+++.++.+.+.+.. ...++.++.+|+.+..
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~Dv~~~~ 69 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEG---FTVFAGRRNGEKLAPLVAEIEA-------------AGGRIVARSLDARNED 69 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTT---CEEEEEESSGGGGHHHHHHHHH-------------TTCEEEEEECCTTCHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHh-------------cCCeEEEEECcCCCHH
Confidence 46789999988763 556777777 7999999998887777665532 1247899999987643
Q ss_pred CC---------CCCccEEEecccc
Q 004178 608 SR---------LHGFDIGTCLEVI 622 (770)
Q Consensus 608 ~~---------d~sFDlVVc~eVL 622 (770)
.- .+..|+++.+..+
T Consensus 70 ~v~~~~~~~~~~g~id~lv~nAg~ 93 (252)
T 3h7a_A 70 EVTAFLNAADAHAPLEVTIFNVGA 93 (252)
T ss_dssp HHHHHHHHHHHHSCEEEEEECCCC
T ss_pred HHHHHHHHHHhhCCceEEEECCCc
Confidence 20 1578999876543
No 458
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=33.53 E-value=36 Score=35.30 Aligned_cols=50 Identities=14% Similarity=0.067 Sum_probs=38.0
Q ss_pred HHHHhhcCCCCEEEEEcC--ccchHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 523 ALQHIKESCATTLVDFGC--GSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 523 Il~~L~~~~~~rVLDIGC--GtG~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
+.+..+..++++||-.|+ |.|..+..+++..+ .+|+++|.+++.++.+++
T Consensus 147 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--~~V~~~~~~~~~~~~~~~ 198 (345)
T 2j3h_A 147 FYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMG--CYVVGSAGSKEKVDLLKT 198 (345)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH
T ss_pred HHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 334455667899999998 57777777776543 689999999988887764
No 459
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=33.36 E-value=96 Score=30.82 Aligned_cols=75 Identities=16% Similarity=0.067 Sum_probs=55.0
Q ss_pred CCCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc
Q 004178 530 SCATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF 606 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl 606 (770)
..++++|=.|++.|. ++..|++.+ .+|+.+|.+++.++...+.+.. ...++.++.+|+.+.
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~Dv~~~ 72 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQG---ADLVLAARTVERLEDVAKQVTD-------------TGRRALSVGTDITDD 72 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH-------------TTCCEEEEECCTTCH
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCc---CEEEEEeCCHHHHHHHHHHHHh-------------cCCcEEEEEcCCCCH
Confidence 357899999987764 556777777 8999999999888777665532 124688999998764
Q ss_pred CC----------CCCCccEEEecc
Q 004178 607 DS----------RLHGFDIGTCLE 620 (770)
Q Consensus 607 p~----------~d~sFDlVVc~e 620 (770)
.. ..+..|+++.+.
T Consensus 73 ~~v~~~~~~~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 73 AQVAHLVDETMKAYGRVDVVINNA 96 (264)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEECC
T ss_pred HHHHHHHHHHHHHcCCCcEEEECC
Confidence 32 135789998865
No 460
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=33.33 E-value=41 Score=34.98 Aligned_cols=45 Identities=11% Similarity=0.098 Sum_probs=35.9
Q ss_pred hcCCCCEEEEEcC--ccchHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 528 KESCATTLVDFGC--GSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 528 ~~~~~~rVLDIGC--GtG~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
+..++++||-+|+ |.|..+..+++..+ .+|+++|.+++.++.+++
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G--~~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFG--ARVIATAGSEDKLRRAKA 209 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHh
Confidence 4557899999998 57888777776543 699999999998888754
No 461
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=32.86 E-value=92 Score=30.22 Aligned_cols=73 Identities=16% Similarity=0.158 Sum_probs=48.9
Q ss_pred CCCEEEEEcCccc---hHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccE-EEEECCcccc
Q 004178 531 CATTLVDFGCGSG---SLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSA-VLFDGSITVF 606 (770)
Q Consensus 531 ~~~rVLDIGCGtG---~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~V-ef~~GDaedl 606 (770)
.++++|=.|++.| .++..|++.+ .+|+++|.+++.++...+.+. .++ .++.+|+.+.
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~~D~~~~ 70 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASG---ARLILIDREAAALDRAAQELG----------------AAVAARIVADVTDA 70 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHG----------------GGEEEEEECCTTCH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhc----------------ccceeEEEEecCCH
Confidence 4678999997655 2455666666 789999999877665544331 245 7888898764
Q ss_pred CCC---------CCCccEEEecccc
Q 004178 607 DSR---------LHGFDIGTCLEVI 622 (770)
Q Consensus 607 p~~---------d~sFDlVVc~eVL 622 (770)
..- .+.+|+++....+
T Consensus 71 ~~~~~~~~~~~~~~~id~li~~Ag~ 95 (254)
T 2wsb_A 71 EAMTAAAAEAEAVAPVSILVNSAGI 95 (254)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHhhCCCcEEEECCcc
Confidence 321 1478999886543
No 462
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=32.45 E-value=79 Score=32.30 Aligned_cols=93 Identities=11% Similarity=0.013 Sum_probs=54.9
Q ss_pred CEEEEEcCccc--hHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCCC
Q 004178 533 TTLVDFGCGSG--SLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSRL 610 (770)
Q Consensus 533 ~rVLDIGCGtG--~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~d 610 (770)
.+|.=||||.- .++..|++.+.+..+|+.+|.+++.++..++.+ .+... .|..+. .
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~------------------gi~~~-~~~~~~---~ 61 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKC------------------GVHTT-QDNRQG---A 61 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTT------------------CCEEE-SCHHHH---H
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHc------------------CCEEe-CChHHH---H
Confidence 57888999852 345566666522248999999998877665421 12222 222211 1
Q ss_pred CCccEEEeccccccCChhHHHHHHHHHHHc-ccCCEEEEEecC
Q 004178 611 HGFDIGTCLEVIEHMEEDEASQFGNIVLSS-FRPRILIVSTPN 652 (770)
Q Consensus 611 ~sFDlVVc~eVLEHL~~d~~~~fleeI~rv-LKPG~LIISTPN 652 (770)
...|+|+..- ++.....+.+++... ++++.+++++-+
T Consensus 62 ~~aDvVilav-----~p~~~~~vl~~l~~~~l~~~~iiiS~~a 99 (280)
T 3tri_A 62 LNADVVVLAV-----KPHQIKMVCEELKDILSETKILVISLAV 99 (280)
T ss_dssp SSCSEEEECS-----CGGGHHHHHHHHHHHHHTTTCEEEECCT
T ss_pred hcCCeEEEEe-----CHHHHHHHHHHHHhhccCCCeEEEEecC
Confidence 3568876543 334445556667777 888855565544
No 463
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=32.32 E-value=43 Score=34.92 Aligned_cols=46 Identities=15% Similarity=0.080 Sum_probs=35.3
Q ss_pred hhcCCCCEEEEEcC--ccchHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 527 IKESCATTLVDFGC--GSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 527 L~~~~~~rVLDIGC--GtG~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
....++++||-+|+ |.|..+..+++..+ .+|+++|.+++.++.+++
T Consensus 165 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--a~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 165 ANLMAGHWVAISGAAGGLGSLAVQYAKAMG--YRVLGIDGGEGKEELFRS 212 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECSTTHHHHHHH
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCC--CcEEEEcCCHHHHHHHHH
Confidence 35567899999999 56777777776443 699999999887777654
No 464
>1whq_A RNA helicase A; double-stranded RNA binding domain, DSRBD, DSRM, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Mus musculus} SCOP: d.50.1.1 PDB: 2rs6_A
Probab=32.19 E-value=35 Score=30.23 Aligned_cols=69 Identities=14% Similarity=0.315 Sum_probs=46.8
Q ss_pred ChhhHHHhhhhhcccCcceeecccCCccccccchhhhhhhhhcccccccccccCCCcccCCCceeeEEEEeeccCCcccc
Q 004178 212 FPREMLFMFCRQHWLSEPVFSTCSNSLKESSESSRFYEKSAALESAETGKECTSGGGTAASDNVRCEVKIFSKSRDPILE 291 (770)
Q Consensus 212 ~p~~~l~~fc~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 291 (770)
=|...|-.+|..+ +..|.|... .. |......|.|+|.|-.. +
T Consensus 7 d~Kt~LqE~~Qk~-~~~P~Y~~~-----------------------------~~--Gp~H~~~F~~~V~v~g~--~---- 48 (99)
T 1whq_A 7 GIKNFLYAWCGKR-KMTPAYEIR-----------------------------AV--GNKNRQKFMCEVRVEGF--N---- 48 (99)
T ss_dssp SSHHHHHHHHHHT-TCCCEEEEE-----------------------------EE--ECSSSEEEEEEEECTTC--S----
T ss_pred CHHHHHHHHHHHC-CCCCeEEEe-----------------------------ee--cCCCCCeEEEEEEECCe--E----
Confidence 4788899999888 888888653 01 11222349999988431 1
Q ss_pred cCchhhhhhhhhhHhhhhhHHHHHHHh
Q 004178 292 CSPKEFYKKQNESIENASLKVLSWLNA 318 (770)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~l~~l~~~~~ 318 (770)
.-....-+..-+|=|+||.++|.+|..
T Consensus 49 ~~~~G~G~SKK~Aeq~AA~~AL~~L~~ 75 (99)
T 1whq_A 49 YAGMGNSTNKKDAQSNAARDFVNYLVR 75 (99)
T ss_dssp CCEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccCCHHHHHHHHHHHHHHHHHh
Confidence 122334466779999999999999863
No 465
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=32.19 E-value=45 Score=34.70 Aligned_cols=44 Identities=23% Similarity=0.199 Sum_probs=35.4
Q ss_pred hcCCCCEEEEEcCcc-chHHHHHhcCC--CCCceEEEEeCChHHHHHHHH
Q 004178 528 KESCATTLVDFGCGS-GSLLDSLLDYP--TALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 528 ~~~~~~rVLDIGCGt-G~ll~~LAk~g--gp~~~VvGVDISeemLe~Ark 574 (770)
+. ++++||-+|+|. |.++..+++.. + .+|+++|.+++-++.+++
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~G--a~Vi~~~~~~~~~~~~~~ 214 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKN--ITIVGISRSKKHRDFALE 214 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTT--CEEEEECSCHHHHHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCC--CEEEEEeCCHHHHHHHHH
Confidence 45 789999999974 77777777654 3 689999999998888865
No 466
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=31.56 E-value=74 Score=31.56 Aligned_cols=77 Identities=13% Similarity=0.030 Sum_probs=54.3
Q ss_pred CCCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc
Q 004178 530 SCATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF 606 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl 606 (770)
..+++||=.|++.|. ++..|++.+ .+|+.+|.+++.++...+.+.. ...++.++.+|+.+.
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~D~~~~ 90 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLG---ARVVLTARDVEKLRAVEREIVA-------------AGGEAESHACDLSHS 90 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH-------------TTCEEEEEECCTTCH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHH-------------hCCceeEEEecCCCH
Confidence 457899999987653 455667776 7899999999888777665532 124688999998764
Q ss_pred CC----------CCCCccEEEecccc
Q 004178 607 DS----------RLHGFDIGTCLEVI 622 (770)
Q Consensus 607 p~----------~d~sFDlVVc~eVL 622 (770)
.. ..+..|+++.+..+
T Consensus 91 ~~v~~~~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 91 DAIAAFATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 32 12468999886544
No 467
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=31.47 E-value=50 Score=34.67 Aligned_cols=46 Identities=15% Similarity=0.030 Sum_probs=36.6
Q ss_pred hhcCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 527 IKESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 527 L~~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
.+..++++||-+|+|. |.++..+++..+ .+|+++|.+++-++.+++
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~~~~~~~~~ 221 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSSRKREDAMK 221 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHH
Confidence 4566789999999874 777777777543 689999999988888865
No 468
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=31.20 E-value=91 Score=31.03 Aligned_cols=78 Identities=13% Similarity=0.025 Sum_probs=53.3
Q ss_pred CCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 531 CATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
.++++|=.|++.|. ++..|++.+ .+|+.+|.+++.++.+.+.+... .....+.++.+|+.+..
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~D~~~~~ 74 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEG---ANVLINGRREENVNETIKEIRAQ-----------YPDAILQPVVADLGTEQ 74 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHHHHHH-----------CTTCEEEEEECCTTSHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhh-----------CCCceEEEEecCCCCHH
Confidence 46789999987653 456677777 89999999998877766655321 11235788888886532
Q ss_pred C------CCCCccEEEecccc
Q 004178 608 S------RLHGFDIGTCLEVI 622 (770)
Q Consensus 608 ~------~d~sFDlVVc~eVL 622 (770)
. ..+..|+++.+-.+
T Consensus 75 ~~~~~~~~~g~id~lv~nAg~ 95 (267)
T 3t4x_A 75 GCQDVIEKYPKVDILINNLGI 95 (267)
T ss_dssp HHHHHHHHCCCCSEEEECCCC
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 1 23578999886543
No 469
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=31.13 E-value=76 Score=34.02 Aligned_cols=95 Identities=12% Similarity=0.084 Sum_probs=55.5
Q ss_pred CCEEEEEcCcc-c-hHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 532 ATTLVDFGCGS-G-SLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 532 ~~rVLDIGCGt-G-~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
..+|.=||+|. | .++..|++.+ .+|+++|.+++.++.+.+. + +.. ..+..++-..
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G---~~V~v~dr~~~~~~~l~~~----------------g---~~~-~~s~~e~~~~ 78 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGG---HECVVYDLNVNAVQALERE----------------G---IAG-ARSIEEFCAK 78 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHTT----------------T---CBC-CSSHHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHC----------------C---CEE-eCCHHHHHhc
Confidence 46899999985 3 3456667776 7999999999877665431 1 110 1122222111
Q ss_pred CCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEecCCc
Q 004178 610 LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPNYE 654 (770)
Q Consensus 610 d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTPN~e 654 (770)
....|+|+..- +.+....+.+.+...|++|.++|..-+..
T Consensus 79 a~~~DvVi~~v-----p~~~v~~vl~~l~~~l~~g~iiId~st~~ 118 (358)
T 4e21_A 79 LVKPRVVWLMV-----PAAVVDSMLQRMTPLLAANDIVIDGGNSH 118 (358)
T ss_dssp SCSSCEEEECS-----CGGGHHHHHHHHGGGCCTTCEEEECSSCC
T ss_pred CCCCCEEEEeC-----CHHHHHHHHHHHHhhCCCCCEEEeCCCCC
Confidence 12358876543 22233445566888899996666555443
No 470
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=30.95 E-value=1.2e+02 Score=30.39 Aligned_cols=74 Identities=16% Similarity=0.084 Sum_probs=52.0
Q ss_pred CCCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc
Q 004178 530 SCATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF 606 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl 606 (770)
..++++|=.|++.|. ++..|++.+ .+|+.+|.+++.++.+.+.+ ..++.++.+|+.+.
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G---~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dl~d~ 74 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRG---ATVIMAVRDTRKGEAAARTM----------------AGQVEVRELDLQDL 74 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHTTS----------------SSEEEEEECCTTCH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHh----------------cCCeeEEEcCCCCH
Confidence 457899999987653 456677776 79999999987776554321 24789999998764
Q ss_pred CC------CCCCccEEEecccc
Q 004178 607 DS------RLHGFDIGTCLEVI 622 (770)
Q Consensus 607 p~------~d~sFDlVVc~eVL 622 (770)
.. ..+..|+++.+..+
T Consensus 75 ~~v~~~~~~~~~iD~lv~nAg~ 96 (291)
T 3rd5_A 75 SSVRRFADGVSGADVLINNAGI 96 (291)
T ss_dssp HHHHHHHHTCCCEEEEEECCCC
T ss_pred HHHHHHHHhcCCCCEEEECCcC
Confidence 32 12578999886543
No 471
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=30.77 E-value=1.2e+02 Score=30.15 Aligned_cols=77 Identities=8% Similarity=0.035 Sum_probs=54.4
Q ss_pred CCCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc
Q 004178 530 SCATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF 606 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl 606 (770)
..++++|=.|.+.|. ++..|++.+ .+|+.+|.+++.++.+.+.+.. .+..++.++.+|+.+.
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~------------~~~~~~~~~~~Dv~~~ 72 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAG---ANVAVAGRSTADIDACVADLDQ------------LGSGKVIGVQTDVSDR 72 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHT------------TSSSCEEEEECCTTSH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHh------------hCCCcEEEEEcCCCCH
Confidence 356889988977653 456677777 7999999999888777665532 1224789999998764
Q ss_pred CC----------CCCCccEEEeccc
Q 004178 607 DS----------RLHGFDIGTCLEV 621 (770)
Q Consensus 607 p~----------~d~sFDlVVc~eV 621 (770)
.. ..+..|+++.+-.
T Consensus 73 ~~v~~~~~~~~~~~g~id~lvnnAg 97 (262)
T 3pk0_A 73 AQCDALAGRAVEEFGGIDVVCANAG 97 (262)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCC
Confidence 32 1247899988654
No 472
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=30.74 E-value=2.9e+02 Score=29.49 Aligned_cols=110 Identities=12% Similarity=0.032 Sum_probs=61.8
Q ss_pred HHHHHhhcC-CCCEEEEEcCccchHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEE
Q 004178 522 YALQHIKES-CATTLVDFGCGSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFD 600 (770)
Q Consensus 522 ~Il~~L~~~-~~~rVLDIGCGtG~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~ 600 (770)
++++.+... .+.+||.+|.+.|.++..|+... ++.+.=|-......+.++... + -....+++..
T Consensus 28 ~ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~~-----~~~~~ds~~~~~~~~~n~~~~--~--------~~~~~~~~~~ 92 (375)
T 4dcm_A 28 YLLQQLDDTEIRGPVLILNDAFGALSCALAEHK-----PYSIGDSYISELATRENLRLN--G--------IDESSVKFLD 92 (375)
T ss_dssp HHHHTTTTCCCCSCEEEECCSSSHHHHHTGGGC-----CEEEESCHHHHHHHHHHHHHT--T--------CCGGGSEEEE
T ss_pred HHHHhhhhccCCCCEEEECCCCCHHHHhhccCC-----ceEEEhHHHHHHHHHHHHHHc--C--------CCccceEecc
Confidence 455554332 45689999999999998887543 455533554444455555321 0 0112356543
Q ss_pred CCccccCCCCCCccEEEeccccccCChhHHHHHHHHHHHcccCC-EEEEEecCC
Q 004178 601 GSITVFDSRLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPR-ILIVSTPNY 653 (770)
Q Consensus 601 GDaedlp~~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG-~LIISTPN~ 653 (770)
. .+ .....||+|+...- .++ ..+...+..+...|+|| .+++...+.
T Consensus 93 ~-~~---~~~~~~~~v~~~lp-k~~--~~l~~~L~~l~~~l~~~~~i~~~g~~~ 139 (375)
T 4dcm_A 93 S-TA---DYPQQPGVVLIKVP-KTL--ALLEQQLRALRKVVTSDTRIIAGAKAR 139 (375)
T ss_dssp T-TS---CCCSSCSEEEEECC-SCH--HHHHHHHHHHHTTCCTTSEEEEEEEGG
T ss_pred c-cc---ccccCCCEEEEEcC-CCH--HHHHHHHHHHHhhCCCCCEEEEEeccc
Confidence 2 22 22467998755221 222 23344555688889999 666655553
No 473
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=30.71 E-value=61 Score=34.55 Aligned_cols=42 Identities=17% Similarity=0.302 Sum_probs=29.6
Q ss_pred CCCCEEEEEcCcc-chHHHHHh-cCCCCCceEEEEeCChHHHHHHHH
Q 004178 530 SCATTLVDFGCGS-GSLLDSLL-DYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 530 ~~~~rVLDIGCGt-G~ll~~LA-k~ggp~~~VvGVDISeemLe~Ark 574 (770)
..+++|+=+|+|. |..+..++ ..+ .+|+++|.+++.++.+++
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~G---a~V~~~d~~~~~~~~~~~ 207 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMG---AQVTILDVNHKRLQYLDD 207 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCC---CEEEEEECCHHHHHHHHH
Confidence 3568999999963 44443333 344 699999999988776654
No 474
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=30.38 E-value=92 Score=27.10 Aligned_cols=102 Identities=18% Similarity=0.221 Sum_probs=52.5
Q ss_pred CCEEEEEcCcc-chH-HHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC--
Q 004178 532 ATTLVDFGCGS-GSL-LDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD-- 607 (770)
Q Consensus 532 ~~rVLDIGCGt-G~l-l~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp-- 607 (770)
.++|+=+|+|. |.. +..|.+.+ .+|+.+|.+++.++.+++ ....++.+|..+..
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g---~~v~~~d~~~~~~~~~~~-------------------~~~~~~~~d~~~~~~l 63 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMG---HEVLAVDINEEKVNAYAS-------------------YATHAVIANATEENEL 63 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT---CCCEEEESCHHHHHTTTT-------------------TCSEEEECCTTCHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHH-------------------hCCEEEEeCCCCHHHH
Confidence 45799999863 332 23444444 689999998765443211 12345667765421
Q ss_pred -C-CCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEecCCchhHHH
Q 004178 608 -S-RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPNYEYNAIL 659 (770)
Q Consensus 608 -~-~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTPN~efN~lf 659 (770)
. ....+|+|+..---. ...........+.+.++.+++...+..+...+
T Consensus 64 ~~~~~~~~d~vi~~~~~~----~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l 113 (144)
T 2hmt_A 64 LSLGIRNFEYVIVAIGAN----IQASTLTTLLLKELDIPNIWVKAQNYYHHKVL 113 (144)
T ss_dssp HTTTGGGCSEEEECCCSC----HHHHHHHHHHHHHTTCSEEEEECCSHHHHHHH
T ss_pred HhcCCCCCCEEEECCCCc----hHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence 1 134689887643211 01112222345556666555555554433333
No 475
>3llh_A RISC-loading complex subunit tarbp2; DSRBD, DSRM, microrna, RNA binding protein; 2.14A {Homo sapiens}
Probab=29.80 E-value=46 Score=28.75 Aligned_cols=72 Identities=18% Similarity=0.209 Sum_probs=45.6
Q ss_pred ccCCCChhhHHHhhhhhcccCcceeecccCCccccccchhhhhhhhhcccccccccccCCCcccCCCceeeEEEEeeccC
Q 004178 207 NWRGSFPREMLFMFCRQHWLSEPVFSTCSNSLKESSESSRFYEKSAALESAETGKECTSGGGTAASDNVRCEVKIFSKSR 286 (770)
Q Consensus 207 ~w~g~~p~~~l~~fc~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 286 (770)
+..+--|...|-.+|..+. ..|.|...+ .. |......|.|+|.|-.
T Consensus 10 ~~~~kd~Ks~LqE~~q~~~-~~p~Y~~~~----------------------------~~--Gp~H~~~F~~~v~v~g--- 55 (90)
T 3llh_A 10 ANPGKTPISLLQEYGTRIG-KTPVYDLLK----------------------------AE--GQAHQPNFTFRVTVGD--- 55 (90)
T ss_dssp ---CCCHHHHHHHHHHHTT-CCCEEEEEE----------------------------EC-------CCEEEEEEETT---
T ss_pred cccCCCHHHHHHHHHHhcC-CCCEEEEEE----------------------------eE--CCCCCCcEEEEEEECC---
Confidence 3456679999999996555 478887640 11 2222345999999952
Q ss_pred CcccccCchhhhhhhhhhHhhhhhHHHHHHH
Q 004178 287 DPILECSPKEFYKKQNESIENASLKVLSWLN 317 (770)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 317 (770)
.+ . ...=+..-+|=|+||.++|..|.
T Consensus 56 -~~--~--~G~G~SKK~Aeq~AA~~aL~~L~ 81 (90)
T 3llh_A 56 -TS--C--TGQGPSKKAAKHKAAEVALKHLK 81 (90)
T ss_dssp -EE--E--EEEESSHHHHHHHHHHHHHHHHC
T ss_pred -EE--E--EEEeCCHHHHHHHHHHHHHHHHH
Confidence 11 2 23445667899999999998773
No 476
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=29.49 E-value=61 Score=34.04 Aligned_cols=48 Identities=13% Similarity=0.104 Sum_probs=36.0
Q ss_pred HHhhcCCCCEEEEEcC--ccchHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 525 QHIKESCATTLVDFGC--GSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 525 ~~L~~~~~~rVLDIGC--GtG~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
+..+..++++||-.|+ |.|..+..+++..+ .+|+++|.+++.++.+++
T Consensus 164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~ 213 (351)
T 1yb5_A 164 HSACVKAGESVLVHGASGGVGLAACQIARAYG--LKILGTAGTEEGQKIVLQ 213 (351)
T ss_dssp TTSCCCTTCEEEEETCSSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH
T ss_pred HhhCCCCcCEEEEECCCChHHHHHHHHHHHCC--CEEEEEeCChhHHHHHHH
Confidence 3445567899999997 46777776766543 789999999988887654
No 477
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=29.45 E-value=1e+02 Score=31.90 Aligned_cols=45 Identities=20% Similarity=0.215 Sum_probs=35.9
Q ss_pred hcCCCCEEEEEcCc-cchHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 528 KESCATTLVDFGCG-SGSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 528 ~~~~~~rVLDIGCG-tG~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
...++++||-+|+| .|..+..+++..+ .+|+++|.+++-++.+++
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~ 206 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMG--LNVVAVDIGDEKLELAKE 206 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHH
Confidence 55678999999996 4777777776543 699999999998888764
No 478
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=29.44 E-value=60 Score=33.79 Aligned_cols=46 Identities=22% Similarity=0.368 Sum_probs=35.2
Q ss_pred hhcCCCCEEEEEcCc--cchHHHHHhcCC-CCCceEEEEeCChHHHHHHHH
Q 004178 527 IKESCATTLVDFGCG--SGSLLDSLLDYP-TALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 527 L~~~~~~rVLDIGCG--tG~ll~~LAk~g-gp~~~VvGVDISeemLe~Ark 574 (770)
.+..++++||-.|+| .|..+..+++.. + .+|+++|.+++.++.+++
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~G--a~Vi~~~~~~~~~~~~~~ 214 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSG--ATIIGVDVREEAVEAAKR 214 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTC--CEEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCC--CeEEEEcCCHHHHHHHHH
Confidence 456678999999998 566666666543 3 789999999998888754
No 479
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=29.40 E-value=2.3e+02 Score=30.04 Aligned_cols=104 Identities=9% Similarity=-0.051 Sum_probs=59.0
Q ss_pred CCEEEEEcCcc--chHHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCCC
Q 004178 532 ATTLVDFGCGS--GSLLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDSR 609 (770)
Q Consensus 532 ~~rVLDIGCGt--G~ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~~ 609 (770)
..+|.=||+|. +.++..|++.+ .+|+.+|.+++.++..++.-.. ..++.......++.+. .|+.+.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G---~~V~l~~r~~~~~~~i~~~~~~-----~~~l~g~~l~~~i~~t-~d~~ea--- 96 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG---QKVRLWSYESDHVDEMQAEGVN-----NRYLPNYPFPETLKAY-CDLKAS--- 96 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT---CCEEEECSCHHHHHHHHHHSSB-----TTTBTTCCCCTTEEEE-SCHHHH---
T ss_pred CCeEEEECccHHHHHHHHHHHHCC---CeEEEEeCCHHHHHHHHHcCCC-----cccCCCCccCCCeEEE-CCHHHH---
Confidence 46799999985 33556677766 7899999999887766542100 0011001111223332 232211
Q ss_pred CCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEEEecC
Q 004178 610 LHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIVSTPN 652 (770)
Q Consensus 610 d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LIISTPN 652 (770)
....|+|+.. ++......+.+.+...++|+.++++.-+
T Consensus 97 ~~~aDvVila-----Vp~~~~~~vl~~i~~~l~~~~ivvs~~k 134 (356)
T 3k96_A 97 LEGVTDILIV-----VPSFAFHEVITRMKPLIDAKTRIAWGTK 134 (356)
T ss_dssp HTTCCEEEEC-----CCHHHHHHHHHHHGGGCCTTCEEEECCC
T ss_pred HhcCCEEEEC-----CCHHHHHHHHHHHHHhcCCCCEEEEEeC
Confidence 2457887653 3444555666778888999954554433
No 480
>2khx_A Ribonuclease 3; drosha, RNA binding domain, hydrolase, gene regulation, NUCL protein, gene regulation,nuclear protein; NMR {Homo sapiens}
Probab=29.13 E-value=60 Score=27.84 Aligned_cols=67 Identities=15% Similarity=0.130 Sum_probs=42.9
Q ss_pred hhhHHHhhhhh-----cccCcceeecccCCccccccchhhhhhhhhcccccccccccCCCcccCCCceeeEEEEeeccCC
Q 004178 213 PREMLFMFCRQ-----HWLSEPVFSTCSNSLKESSESSRFYEKSAALESAETGKECTSGGGTAASDNVRCEVKIFSKSRD 287 (770)
Q Consensus 213 p~~~l~~fc~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 287 (770)
|...|-.+|.. ..+..|.|... . .. |..-...|.|+|.|-.+.
T Consensus 3 ~Kt~LQE~~Q~~~~~~~~~~~p~Y~~~--~--------------------------~~--Gp~H~~~F~v~V~v~g~~-- 50 (85)
T 2khx_A 3 PKSQLQQCCLTLRTEGKEPDIPLYKTL--Q--------------------------TV--GPSHARTYTVAVYFKGER-- 50 (85)
T ss_dssp SCHHHHHHHHHCCCSSSCCCCCCEEEC--C--------------------------CC--CSSSCCCEEEEEEETTEE--
T ss_pred HHHHHHHHHhhhhhhcCCCCCceEEEE--E--------------------------eE--CCCCCCcEEEEEEECCEE--
Confidence 56788888875 34677877664 0 01 222334499999985421
Q ss_pred cccccCchhhhhhhhhhHhhhhhHHHHHH
Q 004178 288 PILECSPKEFYKKQNESIENASLKVLSWL 316 (770)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 316 (770)
+ ....-+..-+|=|+||.++|.-|
T Consensus 51 ----~-~~G~G~SKK~AEq~AA~~AL~~L 74 (85)
T 2khx_A 51 ----I-GCGKGPSIQQAEMGAAMDALEKY 74 (85)
T ss_dssp ----C-CCEEESSHHHHHHHHHHHHHTTC
T ss_pred ----E-EEEeeCCHHHHHHHHHHHHHHHH
Confidence 1 22344666789999999998543
No 481
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=29.09 E-value=91 Score=31.81 Aligned_cols=78 Identities=9% Similarity=0.014 Sum_probs=51.8
Q ss_pred CCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 531 CATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
.++++|=.|++.|. ++..|++.+ .+|+.+|.+++.++...+.+.... ....++.++.+|+.+..
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G---~~V~~~~r~~~~~~~~~~~l~~~~----------~~~~~~~~~~~Dv~d~~ 91 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEG---AQVTITGRNEDRLEETKQQILKAG----------VPAEKINAVVADVTEAS 91 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT----------CCGGGEEEEECCTTSHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHhcC----------CCCceEEEEecCCCCHH
Confidence 46789988977653 455667776 799999999887776655443110 00126888999987643
Q ss_pred C----------CCCCccEEEeccc
Q 004178 608 S----------RLHGFDIGTCLEV 621 (770)
Q Consensus 608 ~----------~d~sFDlVVc~eV 621 (770)
. ..+.+|+++.+..
T Consensus 92 ~v~~~~~~~~~~~g~iD~lvnnAG 115 (297)
T 1xhl_A 92 GQDDIINTTLAKFGKIDILVNNAG 115 (297)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCC
Confidence 2 1247899988654
No 482
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=29.07 E-value=2.4e+02 Score=30.02 Aligned_cols=83 Identities=17% Similarity=0.209 Sum_probs=53.7
Q ss_pred CCEEEEEcCcc--ch-HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC
Q 004178 532 ATTLVDFGCGS--GS-LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS 608 (770)
Q Consensus 532 ~~rVLDIGCGt--G~-ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~ 608 (770)
+++||=.|.+. |. ++..|++.+. .+|+++|.++..+....+.+.... .....++.++.+|+.+...
T Consensus 35 ~k~vLVTGatG~IG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~~~~l~~~~---------~~~~~~v~~~~~Dl~d~~~ 103 (399)
T 3nzo_A 35 QSRFLVLGGAGSIGQAVTKEIFKRNP--QKLHVVDISENNMVELVRDIRSSF---------GYINGDFQTFALDIGSIEY 103 (399)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTCC--SEEEEECSCHHHHHHHHHHHHHHT---------CCCSSEEEEECCCTTSHHH
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCCC--CEEEEEECCcchHHHHHHHHHHhc---------CCCCCcEEEEEEeCCCHHH
Confidence 67899999542 22 3344555542 689999999987766655443211 1112578999999877431
Q ss_pred -----CCCCccEEEeccccccC
Q 004178 609 -----RLHGFDIGTCLEVIEHM 625 (770)
Q Consensus 609 -----~d~sFDlVVc~eVLEHL 625 (770)
...++|+|+.....-|.
T Consensus 104 ~~~~~~~~~~D~Vih~Aa~~~~ 125 (399)
T 3nzo_A 104 DAFIKADGQYDYVLNLSALKHV 125 (399)
T ss_dssp HHHHHHCCCCSEEEECCCCCCG
T ss_pred HHHHHHhCCCCEEEECCCcCCC
Confidence 23679999987666555
No 483
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=29.03 E-value=1.3e+02 Score=30.64 Aligned_cols=81 Identities=15% Similarity=0.057 Sum_probs=54.0
Q ss_pred CCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 531 CATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
.++++|=.|++.|. ++..|++.+....+|+.++.+++.++.+.+.+... ....++.++.+|+.+..
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~Dv~d~~ 100 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQE-----------FPNAKVHVAQLDITQAE 100 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHH-----------CTTCEEEEEECCTTCGG
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhh-----------CCCCeEEEEECCCCCHH
Confidence 46899999987664 34455555411238999999998888776655321 11246889999987653
Q ss_pred C----------CCCCccEEEecccc
Q 004178 608 S----------RLHGFDIGTCLEVI 622 (770)
Q Consensus 608 ~----------~d~sFDlVVc~eVL 622 (770)
. ..+..|+++.+-.+
T Consensus 101 ~v~~~~~~~~~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 101 KIKPFIENLPQEFKDIDILVNNAGK 125 (287)
T ss_dssp GHHHHHHTSCGGGCSCCEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCc
Confidence 2 12579999986543
No 484
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=28.95 E-value=27 Score=35.95 Aligned_cols=39 Identities=21% Similarity=0.175 Sum_probs=32.4
Q ss_pred EEEEEcC--ccchHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 534 TLVDFGC--GSGSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 534 rVLDIGC--GtG~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
+||=.|+ |.|.++..+++..+ .+|+++|.+++-++.+++
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G--a~Vi~~~~~~~~~~~~~~ 189 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG--YQVAAVSGRESTHGYLKS 189 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCGGGHHHHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh
Confidence 3999997 46888888888664 699999999998888865
No 485
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=28.93 E-value=1.4e+02 Score=29.93 Aligned_cols=79 Identities=15% Similarity=0.003 Sum_probs=54.9
Q ss_pred CCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 531 CATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
.++++|=.|.+.|. ++..|++.+ .+|+.+|.+++.++.+.+.+... .....++.++.+|+.+..
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~~~~Dv~~~~ 76 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAG---ASVMIVGRNPDKLAGAVQELEAL----------GANGGAIRYEPTDITNED 76 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHTT----------CCSSCEEEEEECCTTSHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHHh----------CCCCceEEEEeCCCCCHH
Confidence 56899999987663 456777777 79999999998887776655321 011237899999987643
Q ss_pred C----------CCCCccEEEecccc
Q 004178 608 S----------RLHGFDIGTCLEVI 622 (770)
Q Consensus 608 ~----------~d~sFDlVVc~eVL 622 (770)
. ..+..|+++.+-.+
T Consensus 77 ~v~~~~~~~~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 77 ETARAVDAVTAWHGRLHGVVHCAGG 101 (281)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCc
Confidence 2 12478999876543
No 486
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=28.75 E-value=64 Score=31.74 Aligned_cols=76 Identities=12% Similarity=-0.026 Sum_probs=50.0
Q ss_pred CCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 531 CATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
.+++||=.|++.|. ++..|++.+ .+|+.++.+++.++...+.+.. ...++.++.+|+.+..
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~D~~~~~ 76 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFG---AVIHTCARNEYELNECLSKWQK-------------KGFQVTGSVCDASLRP 76 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH-------------TTCCEEEEECCTTSHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHh-------------cCCeeEEEECCCCCHH
Confidence 46788988876552 445666666 7999999998777665554421 1236888889987642
Q ss_pred CC-----------CCCccEEEecccc
Q 004178 608 SR-----------LHGFDIGTCLEVI 622 (770)
Q Consensus 608 ~~-----------d~sFDlVVc~eVL 622 (770)
.- .+.+|+|+....+
T Consensus 77 ~~~~~~~~~~~~~~~~id~li~~Ag~ 102 (266)
T 1xq1_A 77 EREKLMQTVSSMFGGKLDILINNLGA 102 (266)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEECCC
T ss_pred HHHHHHHHHHHHhCCCCcEEEECCCC
Confidence 10 1578999876543
No 487
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=28.73 E-value=83 Score=35.53 Aligned_cols=44 Identities=11% Similarity=0.075 Sum_probs=31.6
Q ss_pred cCCCCEEEEEcCcc-chHHHHHhcCCCCCceEEEEeCChHHHHHHHH
Q 004178 529 ESCATTLVDFGCGS-GSLLDSLLDYPTALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 529 ~~~~~rVLDIGCGt-G~ll~~LAk~ggp~~~VvGVDISeemLe~Ark 574 (770)
...+++|+=+|+|. |..+..+++..+ .+|+++|.++.-++.|++
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~G--a~Viv~d~~~~~~~~A~~ 315 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQG--ARVSVTEIDPINALQAMM 315 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHH
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 45689999999984 554444444332 699999999987777654
No 488
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=28.60 E-value=1.5e+02 Score=30.57 Aligned_cols=78 Identities=18% Similarity=0.160 Sum_probs=55.6
Q ss_pred CCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 531 CATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
.+++||=.|++.|. ++..|++.+ .+|++++.+++.++.+.+.+... ....++.++.+|+.+..
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G---~~Vv~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~Dl~~~~ 72 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQG---CKVAIADIRQDSIDKALATLEAE-----------GSGPEVMGVQLDVASRE 72 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHH-----------TCGGGEEEEECCTTCHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhc-----------CCCCeEEEEECCCCCHH
Confidence 46799999988764 556677777 79999999998888776655321 12237899999987643
Q ss_pred C----------CCCCccEEEecccc
Q 004178 608 S----------RLHGFDIGTCLEVI 622 (770)
Q Consensus 608 ~----------~d~sFDlVVc~eVL 622 (770)
. ..+..|+++.+-.+
T Consensus 73 ~v~~~~~~~~~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 73 GFKMAADEVEARFGPVSILCNNAGV 97 (319)
T ss_dssp HHHHHHHHHHHHTCCEEEEEECCCC
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCc
Confidence 1 12578999987554
No 489
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=28.55 E-value=63 Score=27.18 Aligned_cols=68 Identities=15% Similarity=0.085 Sum_probs=39.7
Q ss_pred CCEEEEEcCcc-ch-HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC--
Q 004178 532 ATTLVDFGCGS-GS-LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD-- 607 (770)
Q Consensus 532 ~~rVLDIGCGt-G~-ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp-- 607 (770)
..+|+=+|+|. |. ++..|.+.+ ..+|+++|.+++.++.... ..+.+..+|+.+..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g--~~~v~~~~r~~~~~~~~~~-------------------~~~~~~~~d~~~~~~~ 63 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSS--NYSVTVADHDLAALAVLNR-------------------MGVATKQVDAKDEAGL 63 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCS--SEEEEEEESCHHHHHHHHT-------------------TTCEEEECCTTCHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC--CceEEEEeCCHHHHHHHHh-------------------CCCcEEEecCCCHHHH
Confidence 46899999952 22 233344443 2689999999876655431 13556666665421
Q ss_pred -CCCCCccEEEecc
Q 004178 608 -SRLHGFDIGTCLE 620 (770)
Q Consensus 608 -~~d~sFDlVVc~e 620 (770)
.....+|+|+..-
T Consensus 64 ~~~~~~~d~vi~~~ 77 (118)
T 3ic5_A 64 AKALGGFDAVISAA 77 (118)
T ss_dssp HHHTTTCSEEEECS
T ss_pred HHHHcCCCEEEECC
Confidence 1124677776543
No 490
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=28.28 E-value=1.6e+02 Score=29.21 Aligned_cols=78 Identities=13% Similarity=-0.044 Sum_probs=55.0
Q ss_pred CCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 531 CATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
.++++|=.|++.|. ++..|++.+ .+|+.+|.+++.++.+.+.+... ....++.++.+|+.+..
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~Dv~~~~ 72 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAG---AAVAFCARDGERLRAAESALRQR-----------FPGARLFASVCDVLDAL 72 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHH-----------STTCCEEEEECCTTCHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHHh-----------cCCceEEEEeCCCCCHH
Confidence 46889999987763 456777777 79999999998887776655321 12235888999987643
Q ss_pred C----------CCCCccEEEecccc
Q 004178 608 S----------RLHGFDIGTCLEVI 622 (770)
Q Consensus 608 ~----------~d~sFDlVVc~eVL 622 (770)
. ..+..|+++.+-.+
T Consensus 73 ~v~~~~~~~~~~~g~id~lvnnAg~ 97 (265)
T 3lf2_A 73 QVRAFAEACERTLGCASILVNNAGQ 97 (265)
T ss_dssp HHHHHHHHHHHHHCSCSEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 2 12578999886543
No 491
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=28.19 E-value=22 Score=37.68 Aligned_cols=40 Identities=15% Similarity=0.174 Sum_probs=26.8
Q ss_pred CCCEEEEEcCc-cchHHHHHhcCCCCCceEEEEeCChHHHHHHH
Q 004178 531 CATTLVDFGCG-SGSLLDSLLDYPTALEKIVGVDISQKSLSRAA 573 (770)
Q Consensus 531 ~~~rVLDIGCG-tG~ll~~LAk~ggp~~~VvGVDISeemLe~Ar 573 (770)
+..+||=+||| .|......+... ..|+..|++.+.++.++
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~---~~v~~~~~~~~~~~~~~ 55 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE---FDVYIGDVNNENLEKVK 55 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT---SEEEEEESCHHHHHHHT
T ss_pred CccEEEEECCCHHHHHHHHHHhcC---CCeEEEEcCHHHHHHHh
Confidence 35689999997 455443333332 68999999988776653
No 492
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=28.00 E-value=3e+02 Score=31.75 Aligned_cols=116 Identities=13% Similarity=0.095 Sum_probs=66.1
Q ss_pred CCCEEEEEcCccchHHHHHhcCCC-------CCceEEEEeCChHHHHHHHHHHhhhhh--cc-c----ccCCCC-----C
Q 004178 531 CATTLVDFGCGSGSLLDSLLDYPT-------ALEKIVGVDISQKSLSRAAKIIHSKLS--KK-L----DAAVPC-----T 591 (770)
Q Consensus 531 ~~~rVLDIGCGtG~ll~~LAk~gg-------p~~~VvGVDISeemLe~ArkrL~~~~s--~~-~----~~l~pr-----~ 591 (770)
+...|+-+|||-=.....|....+ ...+++=||. ++.++.-++.+..... .. . ....+. -
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~-p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDY-SDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFL 185 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEEC-HHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECcc-HHHHHHHHHHHHcChHHHHhhccccccccccccccccc
Confidence 457899999998888877765421 1356666774 4444444444432110 00 0 000000 0
Q ss_pred CCccEEEEECCccccCC-----------CCCCccEEEeccccccCChhHHHHHHHHHHHcccCCEEEE
Q 004178 592 DVKSAVLFDGSITVFDS-----------RLHGFDIGTCLEVIEHMEEDEASQFGNIVLSSFRPRILIV 648 (770)
Q Consensus 592 ~~~~Vef~~GDaedlp~-----------~d~sFDlVVc~eVLEHL~~d~~~~fleeI~rvLKPG~LII 648 (770)
...+..++..|+.+... ....-=++++-.++.+|+++....+++.+.+ +.++.+++
T Consensus 186 ~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~-~~~~~~~~ 252 (695)
T 2zwa_A 186 TTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK-MENSHFII 252 (695)
T ss_dssp ECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT-SSSEEEEE
T ss_pred cCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh-CCCceEEE
Confidence 01367888899876421 1122335677789999999999999987765 44344444
No 493
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=27.88 E-value=1.2e+02 Score=30.11 Aligned_cols=71 Identities=15% Similarity=0.079 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc
Q 004178 530 SCATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF 606 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl 606 (770)
..++++|=.|++.|. ++..|++.+ .+|+.+|.+++.++.+.+.+ ..++.++.+|+.+.
T Consensus 28 l~~k~vlVTGas~GIG~aia~~l~~~G---~~Vi~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dl~~~ 88 (281)
T 3ppi_A 28 FEGASAIVSGGAGGLGEATVRRLHADG---LGVVIADLAAEKGKALADEL----------------GNRAEFVSTNVTSE 88 (281)
T ss_dssp GTTEEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHH----------------CTTEEEEECCTTCH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCC---CEEEEEeCChHHHHHHHHHh----------------CCceEEEEcCCCCH
Confidence 357789999987763 556777777 79999999998877665543 13688899998764
Q ss_pred CC---------CCCCccEEEec
Q 004178 607 DS---------RLHGFDIGTCL 619 (770)
Q Consensus 607 p~---------~d~sFDlVVc~ 619 (770)
.. ..+..|+++.+
T Consensus 89 ~~v~~~~~~~~~~~~id~lv~~ 110 (281)
T 3ppi_A 89 DSVLAAIEAANQLGRLRYAVVA 110 (281)
T ss_dssp HHHHHHHHHHTTSSEEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCeEEEc
Confidence 31 23578888876
No 494
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=27.68 E-value=92 Score=31.56 Aligned_cols=62 Identities=8% Similarity=0.040 Sum_probs=43.3
Q ss_pred CCCEEEEEcCccch---HHHHHhcCCCCCceEEEEe-CChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc
Q 004178 531 CATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVD-ISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF 606 (770)
Q Consensus 531 ~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVD-ISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl 606 (770)
.++++|=.|++.|. ++..|++.+ .+|+.+| .+++.++.+.+.+... ...++.++.+|+.+.
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G---~~V~~~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~Dl~~~ 72 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEG---YAVCLHYHRSAAEANALSATLNAR------------RPNSAITVQADLSNV 72 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTT---CEEEEEESSCHHHHHHHHHHHHHH------------STTCEEEEECCCSSS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC---CeEEEEcCCCHHHHHHHHHHHhhh------------cCCeeEEEEeecCCc
Confidence 46788888887663 455667776 7999999 9988777665554210 123688889998775
Q ss_pred C
Q 004178 607 D 607 (770)
Q Consensus 607 p 607 (770)
.
T Consensus 73 ~ 73 (291)
T 1e7w_A 73 A 73 (291)
T ss_dssp C
T ss_pred c
Confidence 5
No 495
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=27.67 E-value=2.6e+02 Score=26.25 Aligned_cols=95 Identities=11% Similarity=0.065 Sum_probs=54.5
Q ss_pred EEEEEcCc--cch-HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccCC-C
Q 004178 534 TLVDFGCG--SGS-LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFDS-R 609 (770)
Q Consensus 534 rVLDIGCG--tG~-ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp~-~ 609 (770)
+||=.|+. .|. ++..|++.+ .+|++++-++..+... ...+++++.+|+.+... .
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~-------------------~~~~~~~~~~D~~d~~~~~ 59 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRG---HEVLAVVRDPQKAADR-------------------LGATVATLVKEPLVLTEAD 59 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHH-------------------TCTTSEEEECCGGGCCHHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCC---CEEEEEEecccccccc-------------------cCCCceEEecccccccHhh
Confidence 57888863 233 344555665 7999999987654321 01368899999876543 2
Q ss_pred CCCccEEEeccccccCC--hhHHHHHHHHHHHcccC-C--EEEEEe
Q 004178 610 LHGFDIGTCLEVIEHME--EDEASQFGNIVLSSFRP-R--ILIVST 650 (770)
Q Consensus 610 d~sFDlVVc~eVLEHL~--~d~~~~fleeI~rvLKP-G--~LIIST 650 (770)
..++|+|+.....-+-+ ..........+.+.++. | ++++++
T Consensus 60 ~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS 105 (224)
T 3h2s_A 60 LDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG 105 (224)
T ss_dssp HTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred cccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 35789998876553211 11122223345556654 3 555554
No 496
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=27.57 E-value=1.5e+02 Score=29.52 Aligned_cols=76 Identities=18% Similarity=0.212 Sum_probs=52.8
Q ss_pred CCCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCC----------------hHHHHHHHHHHhhhhhcccccCCCC
Q 004178 530 SCATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDIS----------------QKSLSRAAKIIHSKLSKKLDAAVPC 590 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDIS----------------eemLe~ArkrL~~~~s~~~~~l~pr 590 (770)
..++++|=.|++.|. ++..|++.+ .+|+.+|.+ ++.++...+.+.
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G---~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 72 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEG---ADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVK------------- 72 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTT---CEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHH-------------
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCC---CeEEEEeccccccccccccccccCCHHHHHHHHHHHh-------------
Confidence 357899999998764 566777777 899999987 566655544442
Q ss_pred CCCccEEEEECCccccCC----------CCCCccEEEeccc
Q 004178 591 TDVKSAVLFDGSITVFDS----------RLHGFDIGTCLEV 621 (770)
Q Consensus 591 ~~~~~Vef~~GDaedlp~----------~d~sFDlVVc~eV 621 (770)
....++.++.+|+.+... ..+..|+++.+-.
T Consensus 73 ~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg 113 (286)
T 3uve_A 73 GHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAG 113 (286)
T ss_dssp TTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred hcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCc
Confidence 123478899999876432 1247899988654
No 497
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=27.37 E-value=1.6e+02 Score=28.97 Aligned_cols=74 Identities=19% Similarity=0.148 Sum_probs=52.6
Q ss_pred CCCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCcccc
Q 004178 530 SCATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVF 606 (770)
Q Consensus 530 ~~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedl 606 (770)
..++++|=.|++.|. ++..|++.+ .+|+.+|.+++.++...+.+. .++.++.+|+.+.
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~D~~~~ 66 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREG---ATVAIADIDIERARQAAAEIG----------------PAAYAVQMDVTRQ 66 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHC----------------TTEEEEECCTTCH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhC----------------CCceEEEeeCCCH
Confidence 356889999987663 456777777 899999999887776655331 3578889998764
Q ss_pred CC----------CCCCccEEEecccc
Q 004178 607 DS----------RLHGFDIGTCLEVI 622 (770)
Q Consensus 607 p~----------~d~sFDlVVc~eVL 622 (770)
.. ..+..|+++.+-.+
T Consensus 67 ~~v~~~~~~~~~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 67 DSIDAAIAATVEHAGGLDILVNNAAL 92 (259)
T ss_dssp HHHHHHHHHHHHHSSSCCEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 32 12479999986544
No 498
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=27.33 E-value=77 Score=33.25 Aligned_cols=46 Identities=17% Similarity=0.257 Sum_probs=35.5
Q ss_pred hhcCCCCEEEEEcCc-cchHHHHHhcCC-CCCceEEEEeCChHHHHHHHH
Q 004178 527 IKESCATTLVDFGCG-SGSLLDSLLDYP-TALEKIVGVDISQKSLSRAAK 574 (770)
Q Consensus 527 L~~~~~~rVLDIGCG-tG~ll~~LAk~g-gp~~~VvGVDISeemLe~Ark 574 (770)
.+..++++||=+|+| .|.++..+++.. + .+|+++|.+++-++.+++
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~G--a~Vi~~~~~~~~~~~~~~ 229 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTP--ATVIALDVKEEKLKLAER 229 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCC--CEEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC--CeEEEEeCCHHHHHHHHH
Confidence 456678999999986 356666777653 3 689999999998888864
No 499
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=27.23 E-value=3.8e+02 Score=27.81 Aligned_cols=39 Identities=21% Similarity=0.314 Sum_probs=25.5
Q ss_pred CCCEEEEEcCcc-ch-HHHHHhcCCCCCceEEEEeCChHHHH
Q 004178 531 CATTLVDFGCGS-GS-LLDSLLDYPTALEKIVGVDISQKSLS 570 (770)
Q Consensus 531 ~~~rVLDIGCGt-G~-ll~~LAk~ggp~~~VvGVDISeemLe 570 (770)
...+|.=+|+|. |. ++..++..+ ...+|+.+|++++.++
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~-~~~ev~l~Di~~~~~~ 45 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQG-IADEIVLIDANESKAI 45 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHT-CCSEEEEECSSHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCC-CCCEEEEEeCCcchHH
Confidence 356899999984 22 333343332 2368999999987554
No 500
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=27.14 E-value=1.3e+02 Score=29.18 Aligned_cols=76 Identities=12% Similarity=0.071 Sum_probs=50.9
Q ss_pred CCCEEEEEcCccch---HHHHHhcCCCCCceEEEEeCChHHHHHHHHHHhhhhhcccccCCCCCCCccEEEEECCccccC
Q 004178 531 CATTLVDFGCGSGS---LLDSLLDYPTALEKIVGVDISQKSLSRAAKIIHSKLSKKLDAAVPCTDVKSAVLFDGSITVFD 607 (770)
Q Consensus 531 ~~~rVLDIGCGtG~---ll~~LAk~ggp~~~VvGVDISeemLe~ArkrL~~~~s~~~~~l~pr~~~~~Vef~~GDaedlp 607 (770)
.+++||=.|++.|. ++..|++.+ .+|+++|.++..++...+.+.. ...++.++.+|+.+..
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~l~~-------------~~~~~~~~~~D~~~~~ 75 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAG---ARVIIADLDEAMATKAVEDLRM-------------EGHDVSSVVMDVTNTE 75 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHH-------------TTCCEEEEECCTTCHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHHHh-------------cCCceEEEEecCCCHH
Confidence 46789999976542 445666666 7999999998776655544421 1236889999987643
Q ss_pred C----------CCCCccEEEecccc
Q 004178 608 S----------RLHGFDIGTCLEVI 622 (770)
Q Consensus 608 ~----------~d~sFDlVVc~eVL 622 (770)
. ..+.+|+|+....+
T Consensus 76 ~~~~~~~~~~~~~~~id~vi~~Ag~ 100 (260)
T 3awd_A 76 SVQNAVRSVHEQEGRVDILVACAGI 100 (260)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 2 01468999876543
Done!