Your job contains 1 sequence.
>004180
MADGEGDIRRLKCKKCDNVGFECAYDGFYYCTHCNALDDEIVETGVADEDFMATGAGTGT
ALYQASHARQVANSRPANHFVPLSQQSSFWSPLFDEPNTTTTTTTTANYNDLDSIIHRIK
REEVSYTDMVGPTEPQDFGSSGPVKADYEDYHFEVRMKYVMGMQLMIQLQCEALVDKFNV
CPLICGVAASIWFRFLASTGLLSQGWADEAIVQSESQELESKDFQPRAKYRDEPHTLHGQ
RAVMIWYKLLRQKIPLSSSLAISFLACHVVREAILPTDIVKWSIEGKIPYFAAFVEIEKR
FGQTSVACSLSPSFMFRPSKSVPSQKLESFAASIAESIGLHLPPVNFYALASRYLKQLCL
PLGKILPRALKIQEWSMPPDLWLSTNECRFPTRVCVMSILIVSIRILYNINGFGAWEKSL
SSRKFFSSTSNIGGKFDPECNSKMRDEVEEISCSPSSVIGDSNAKSSKNSSHFKESELDA
EALLYDLEARYNDIHDSVTYEYSKDLPTYLKYCKDVVFAGLEPPHDDPEEAIMIEKFWKF
YQNEKESEAAEDSGKRCGIASKRKRSRDDLSLGSHYKESEKIREKEFTTRLSASADYESF
SGDDYPQQSLNGDNSSKSSEEYPNSEAIDEASAETIIDSAVKRLKLDMENNRFCYISPRV
QIKRLDYLQYVRKSDEGALTYAAHADYYILLRACATIAQVDIRSMHMAVLSFERRLAWLE
KRIDHCLHLTPPSVTCRFCSDPVELAAGDPICNATEDSADDHIGLSNLNT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004180
(770 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:504955973 - symbol:MEE12 "maternal effect embr... 876 3.3e-130 2
UNIPROTKB|Q5W770 - symbol:Os05g0352700 "TATA box-binding ... 655 1.9e-104 4
>TAIR|locus:504955973 [details] [associations]
symbol:MEE12 "maternal effect embryo arrest 12"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IMP] EMBL:AC004138 EMBL:CP002685 GO:GO:0005730
GO:GO:0046872 GO:GO:0009793 EMBL:AY735572 EMBL:AY735573
EMBL:AY735574 IPI:IPI00526069 RefSeq:NP_671769.1 UniGene:At.50973
PRIDE:Q5XVF0 EnsemblPlants:AT2G02955.1 GeneID:814824
KEGG:ath:AT2G02955 TAIR:At2g02955 eggNOG:NOG305893
HOGENOM:HOG000083963 InParanoid:Q5XVF0 OMA:GERSAAC PhylomeDB:Q5XVF0
ProtClustDB:CLSN2690105 Genevestigator:Q5XVF0 GO:GO:0001164
GO:GO:0001187 InterPro:IPR021752 Pfam:PF11781 Uniprot:Q5XVF0
Length = 666
Score = 876 (313.4 bits), Expect = 3.3e-130, Sum P(2) = 3.3e-130
Identities = 182/407 (44%), Positives = 249/407 (61%)
Query: 13 CKKCDNVGFECAYDGFYYCTHCNALDDEIVETGVADEDFMATGAGTGTALYQASHARQVA 72
C +C+N F+ DG+YYC C + +++TGV D D + G GT ALY H R
Sbjct: 3 CTECENDAFDEEDDGYYYCQRCGVQVENLIQTGVDDGDLIGEGGGTQGALYNPKHRR--T 60
Query: 73 NSRPANHFVPLSQQSSFWSPLFDEPNXXXXXXXXANYNDLDSIIHRIKREEVSYTDMVGP 132
+P P Q F D + N + +KR SY D P
Sbjct: 61 EPQP---ITP--SQPRFTD---DTSRYSQFKSQFESENGNKELPREVKRAPDSYVDKE-P 111
Query: 133 TEPQDFGSSGPVKADYEDYHFEVRMKYVMGMQLMIQLQCEALVDKFNVCPLICGVAASIW 192
TEP DF + YE+Y+ E R +YV +MI QC+ALVDKFNV PLI G+ I
Sbjct: 112 TEPVDFAAE---TLSYENYYDEARDRYVKAFLMMITYQCDALVDKFNVTPLIIGLVGPIS 168
Query: 193 FRFLASTGLLSQGWADEAIVQSE--SQELESKDFQPRAKYRDEPHTLHGQRAVMIWYKLL 250
R++A +G+ + WA+ AI SE S++ E KD + +++ EP + G+RAV IW+ +L
Sbjct: 169 LRYVALSGVYHKDWANNAIRDSEHQSEDGEVKDAKRLKRHKAEPRNIDGKRAVTIWFGIL 228
Query: 251 RQKIPLSSSLAISFLACHVVREAILPTDIVKWSIEGKIPYFAAFVEIEKRFGQTSVACSL 310
++ +PLSSSL ISFLACH +LPTDIV+W+ EGK+PY + F++I ++ G+ S AC +
Sbjct: 229 KKTMPLSSSLVISFLACHQAGAPVLPTDIVRWAREGKLPYLSCFLDIREQMGERSAACPV 288
Query: 311 SPSFMFRPSKSVPSQKLESFAASIAESIGLHLPPVNFYALASRYLKQLCLPLGKILPRAL 370
S M RP + + +Q LE+ A+ IA++IGL LPPVNFY +AS Y+KQL +P KIL A
Sbjct: 289 KVSIMARPFQVISAQMLEARASVIADTIGLPLPPVNFYGIASNYIKQLSIPEDKILDLAR 348
Query: 371 KIQEWSMPPDLWLSTNECRFPTRVCVMSILIVSIRILYNINGFGAWE 417
IQ WS+PP+L+LSTNE + P+RVCVMSILIV+IR+LYNING G WE
Sbjct: 349 LIQNWSLPPELYLSTNEQKLPSRVCVMSILIVAIRMLYNINGLGVWE 395
Score = 422 (153.6 bits), Expect = 3.3e-130, Sum P(2) = 3.3e-130
Identities = 97/214 (45%), Positives = 133/214 (62%)
Query: 542 QNEKESEAAEDSGKRCGIASKRKRSRDDL-----SLGSHYKESEKI-------REKEFTT 589
++EK+ + GK A + S DD +L + Y + E I R+ +
Sbjct: 443 ESEKDLVSYLSLGKNEFFAGLEEDSPDDTYRIVDNLWNGYPKDEDIECLPKRGRDWDDDV 502
Query: 590 RLSASADYES-FSGDDYPQQSLNGDNSSKS-SEEYPNSEAIDEASAETIIDSAVKRLKLD 647
L+ + Y+S FS + P S + N S S + +SE + +S E + + A+KRL D
Sbjct: 503 SLNQLSLYDSRFSDGNNPCSSSSRRNESVSIGLDLSSSEHRESSSPEKLKEIAIKRLITD 562
Query: 648 MENNRFCYISPRVQIKRLDYLQYVRKSDEGALTYAAHADYYILLRACATIAQVDIRSMHM 707
M ++ FCYI PRV++KRLDYLQYVRK ++GAL YAAHADYYILLR CA +A++D+R+MH
Sbjct: 563 MGDDLFCYIPPRVKVKRLDYLQYVRKKEDGALIYAAHADYYILLRVCAKVAEIDVRNMHR 622
Query: 708 AVLSFERRLAWLEKRIDHCLHLTPPSVTCRFCSD 741
VLSFERRLAW+EKRID LHLT P +TC+ C D
Sbjct: 623 GVLSFERRLAWIEKRIDQVLHLTRPLMTCKHCCD 656
Score = 87 (35.7 bits), Expect = 7.8e-95, Sum P(2) = 7.8e-95
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 490 RYNDIHDSVTYEYSKDLPTYLKYCKDVVFAGLEPPHDDPEEAI-MIEKFWKFYQNEKESE 548
+Y+++ + T E KDL +YL K+ FAGLE D P++ +++ W Y +++ E
Sbjct: 433 KYHEVA-AETLESEKDLVSYLSLGKNEFFAGLE--EDSPDDTYRIVDNLWNGYPKDEDIE 489
Query: 549 AAEDSGK 555
G+
Sbjct: 490 CLPKRGR 496
>UNIPROTKB|Q5W770 [details] [associations]
symbol:Os05g0352700 "TATA box-binding protein-associated
factor RNA polymerase I subunit B" species:39947 "Oryza sativa
Japonica Group" [GO:0001164 "RNA polymerase I CORE element
sequence-specific DNA binding" evidence=ISS] [GO:0001187 "RNA
polymerase I CORE element sequence-specific DNA binding
transcription factor recruiting transcription factor activity"
evidence=ISS] [GO:0001189 "RNA polymerase I transcriptional
preinitiation complex assembly at the promoter for the nuclear
large rRNA transcript" evidence=ISS] GO:GO:0005730 GO:GO:0046872
EMBL:CM000142 eggNOG:NOG305893 HOGENOM:HOG000083963 GO:GO:0001164
GO:GO:0001187 EMBL:AC104711 KEGG:dosa:Os05t0352750-00
Gramene:Q5W770 Uniprot:Q5W770
Length = 634
Score = 655 (235.6 bits), Expect = 1.9e-104, Sum P(4) = 1.9e-104
Identities = 135/334 (40%), Positives = 201/334 (60%)
Query: 126 YTDMVGPTEPQDFGSSGPVKADYEDYHFEVRMKYVMGMQLMIQLQCEALVDKFNVCPLIC 185
+ D+ P+EP+DF + + ED VR +YV G+Q+++Q Q EALV++ V L
Sbjct: 100 FDDLGEPSEPRDFATGANAWGNPEDVAARVRWRYVRGLQVILQRQLEALVERHRVGSLAA 159
Query: 186 GVAASIWFRFLASTGLLSQGWADE--AIVQS-ESQELESKDFQPRAKYRDEPHTLHGQRA 242
+A +IW R++A++ + + W + AI S E SKD Q + D +
Sbjct: 160 SLAGTIWLRWVAASKVFDEMWVHKMLAIAASVEEGHSASKDKQSELE-GDAQKSQSSYE- 217
Query: 243 VMIWYKLLRQKIPLSSSLAISFLACHVVREAILPTDIVKWSIEGKIPYFAAFVEIEKRFG 302
++ + LR +P+ S+LA+ FLACHV RE ILPTDI +W++EGK+PY AAF +++K G
Sbjct: 218 -FLFLRSLRMMLPVYSTLAVCFLACHVARETILPTDICRWAMEGKLPYVAAFTQVDKLLG 276
Query: 303 QTSVACSLSPSFMFRPSKSVPSQKLESFAASIAESIGLHLPPVNFYALASRYLKQLCLPL 362
+ C LS +FRP++ + + +LE+ A SIA+ IGL LP VNFY +A R+LK+L LP+
Sbjct: 277 SSLNDCPLSSRQLFRPTRVIGAWQLEAAAGSIAQKIGLLLPSVNFYLIAQRFLKELSLPI 336
Query: 363 GKILPRALKIQEWSMPPDLWLSTNECRFPTRVCVMSILIVSIRILYNINGFGAWEXXXXX 422
KILP A +I EW+MP +LWLS+N R P+RVCVM+ILIV++R+LY ING G WE
Sbjct: 337 EKILPHACRIYEWAMPAELWLSSNPGRVPSRVCVMAILIVALRVLYGINGQGIWESIAQT 396
Query: 423 XXXXXXXXNIGG--KFDPECNSKMRDEVEEISCS 454
+P+ N+ + E+ C+
Sbjct: 397 ENAVGSDPEASAPHSIEPDSNNSEEFDARELLCT 430
Score = 241 (89.9 bits), Expect = 1.9e-104, Sum P(4) = 1.9e-104
Identities = 44/89 (49%), Positives = 61/89 (68%)
Query: 640 AVKRLKLDMENNRFCYISPRVQIKRLDYLQYVRKSDEGALTYAAHADYYILLRACATIAQ 699
A++ +K ME N FCY+SPR ++ YL Y R+ G+L Y AHADYYILLR A +A+
Sbjct: 528 ALQSIKSKMEENGFCYVSPRKRLVSDGYLLYTRRESSGSLIYVAHADYYILLRPFAKLAE 587
Query: 700 VDIRSMHMAVLSFERRLAWLEKRIDHCLH 728
VD+R +H +VL ERRL W+E+R+ L+
Sbjct: 588 VDVRVLHSSVLKLERRLGWIEERVGRSLN 616
Score = 117 (46.2 bits), Expect = 1.9e-104, Sum P(4) = 1.9e-104
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 497 SVTYEYSKDLPTYLKYCKDVVFAGLEPPHDDPEEAIMIEKFWKFYQNEKESEAAEDSGKR 556
+V ++YSK++ +YLKYCKDVVF G+ EE +I+ FW Y+ KE +++ K
Sbjct: 439 NVGHDYSKEVHSYLKYCKDVVFTGMT---FSLEEEHLIDIFWDMYKG-KEVMLLDENAKL 494
Query: 557 C 557
C
Sbjct: 495 C 495
Score = 65 (27.9 bits), Expect = 1.9e-104, Sum P(4) = 1.9e-104
Identities = 32/126 (25%), Positives = 50/126 (39%)
Query: 4 GEGDIRRLKCKKCDNVGFECAYD----GFYYCTHCNALDDEIVETGVADEDFMATGAGTG 59
G G I L C+ C + G E A D GF+ C C+A+ T DF T A
Sbjct: 13 GGGGIH-LVCEYCGH-GSEYAEDDADDGFFTCRQCSAIHTSTQNTATNPFDFPMTPA--- 67
Query: 60 TALYQASHARQVANSRPANHF-VPLSQQSSFWSPLFD---EPNXXXXXXXXAN-YNDLDS 114
+ ++H R + F P + +P FD EP+ AN + + +
Sbjct: 68 ---HLSAHRRPTQPTPTPKPFPAPRGAATGAAAPDFDDLGEPSEPRDFATGANAWGNPED 124
Query: 115 IIHRIK 120
+ R++
Sbjct: 125 VAARVR 130
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 770 734 0.00087 121 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 628 (67 KB)
Total size of DFA: 422 KB (2202 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 65.36u 0.10s 65.46t Elapsed: 00:00:03
Total cpu time: 65.36u 0.10s 65.46t Elapsed: 00:00:03
Start: Sat May 11 08:39:40 2013 End: Sat May 11 08:39:43 2013