Query 004181
Match_columns 770
No_of_seqs 551 out of 3897
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 16:51:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004181.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004181hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3org_A CMCLC; transporter, tra 100.0 2.5E-77 8.5E-82 702.6 37.3 562 86-764 5-627 (632)
2 1ots_A Voltage-gated CLC-type 100.0 1.3E-64 4.4E-69 572.5 41.9 417 88-564 32-450 (465)
3 3nd0_A SLL0855 protein; CLC fa 100.0 3.2E-64 1.1E-68 567.3 40.5 416 87-564 27-442 (466)
4 4ene_A CLC-EC1, H(+)/CL(-) exc 100.0 1.4E-63 4.9E-68 560.6 43.0 415 88-564 17-435 (446)
5 4esy_A CBS domain containing m 99.8 5.8E-19 2E-23 172.5 11.3 130 619-760 13-160 (170)
6 3lv9_A Putative transporter; C 99.7 1.2E-17 4.2E-22 158.9 15.3 124 620-762 19-145 (148)
7 3k6e_A CBS domain protein; str 99.7 4.8E-18 1.6E-22 164.0 12.3 128 624-764 15-144 (156)
8 2ef7_A Hypothetical protein ST 99.7 2E-17 6.7E-22 154.2 14.2 128 622-766 2-129 (133)
9 3kpb_A Uncharacterized protein 99.7 1.9E-17 6.4E-22 151.8 13.0 120 624-762 1-120 (122)
10 3fv6_A YQZB protein; CBS domai 99.7 5.5E-17 1.9E-21 156.5 15.5 137 617-767 10-149 (159)
11 3hf7_A Uncharacterized CBS-dom 99.7 1.6E-17 5.3E-22 154.9 11.2 125 623-763 1-128 (130)
12 3jtf_A Magnesium and cobalt ef 99.7 1.9E-17 6.4E-22 154.0 11.7 121 622-762 3-126 (129)
13 3i8n_A Uncharacterized protein 99.7 1.9E-17 6.5E-22 154.1 11.2 123 621-761 3-128 (130)
14 3gby_A Uncharacterized protein 99.7 1.1E-17 3.7E-22 155.2 9.3 124 622-762 3-126 (128)
15 3lfr_A Putative metal ION tran 99.7 1.1E-17 3.7E-22 157.2 9.2 126 623-765 2-130 (136)
16 3nqr_A Magnesium and cobalt ef 99.7 1.2E-17 4.1E-22 154.8 9.2 121 623-761 2-125 (127)
17 3lhh_A CBS domain protein; str 99.7 4.2E-17 1.4E-21 159.7 13.5 126 620-764 38-166 (172)
18 3ctu_A CBS domain protein; str 99.7 4.1E-17 1.4E-21 156.6 12.6 134 619-765 10-145 (156)
19 3lqn_A CBS domain protein; csg 99.7 2.6E-17 8.7E-22 156.9 11.0 135 618-765 9-146 (150)
20 2o16_A Acetoin utilization pro 99.7 8.2E-17 2.8E-21 155.6 14.4 132 622-765 3-138 (160)
21 2p9m_A Hypothetical protein MJ 99.7 4.8E-17 1.7E-21 152.4 12.3 128 619-762 3-136 (138)
22 2rih_A Conserved protein with 99.7 9.6E-17 3.3E-21 151.3 14.3 123 623-762 4-128 (141)
23 3oco_A Hemolysin-like protein 99.7 4.4E-17 1.5E-21 156.1 12.1 127 620-765 16-146 (153)
24 2yzi_A Hypothetical protein PH 99.7 6.1E-17 2.1E-21 151.8 12.6 128 621-765 4-132 (138)
25 4gqw_A CBS domain-containing p 99.7 2.7E-17 9.4E-22 156.4 10.3 134 622-766 3-147 (152)
26 1pbj_A Hypothetical protein; s 99.7 8.8E-17 3E-21 147.8 13.1 122 624-762 1-122 (125)
27 3fhm_A Uncharacterized protein 99.7 6.9E-17 2.4E-21 156.8 12.8 132 618-764 18-152 (165)
28 3kxr_A Magnesium transporter, 99.7 1.2E-16 4.2E-21 161.2 14.8 128 621-769 51-181 (205)
29 2pfi_A Chloride channel protei 99.7 1.6E-16 5.5E-21 153.3 13.9 139 621-765 10-150 (164)
30 3k2v_A Putative D-arabinose 5- 99.7 8.6E-17 2.9E-21 153.3 11.2 119 624-758 28-148 (149)
31 1y5h_A Hypothetical protein RV 99.7 3.7E-17 1.3E-21 152.3 8.0 127 620-762 4-131 (133)
32 2d4z_A Chloride channel protei 99.7 3.2E-16 1.1E-20 162.6 15.7 134 620-765 9-249 (250)
33 3sl7_A CBS domain-containing p 99.7 8.1E-17 2.8E-21 157.9 10.2 132 623-765 3-159 (180)
34 1yav_A Hypothetical protein BS 99.7 1.1E-16 3.8E-21 154.2 10.7 134 620-766 10-146 (159)
35 2j9l_A Chloride channel protei 99.7 3.4E-16 1.2E-20 154.3 13.9 137 618-766 5-169 (185)
36 2rc3_A CBS domain; in SITU pro 99.7 3.8E-16 1.3E-20 145.9 13.4 123 625-763 7-132 (135)
37 2emq_A Hypothetical conserved 99.7 2.1E-16 7.2E-21 151.6 11.0 132 620-764 7-141 (157)
38 1o50_A CBS domain-containing p 99.7 3.4E-16 1.2E-20 150.5 12.4 133 618-763 10-154 (157)
39 3oi8_A Uncharacterized protein 99.7 1.3E-16 4.5E-21 153.5 8.9 119 620-757 34-155 (156)
40 3ocm_A Putative membrane prote 99.7 5.1E-16 1.8E-20 152.3 13.0 124 620-763 32-158 (173)
41 2uv4_A 5'-AMP-activated protei 99.7 7.5E-16 2.6E-20 147.3 13.7 137 616-762 15-151 (152)
42 1pvm_A Conserved hypothetical 99.6 6.6E-16 2.2E-20 152.8 13.1 125 624-762 9-133 (184)
43 1ots_A Voltage-gated CLC-type 99.6 3.3E-15 1.1E-19 168.7 18.4 193 348-559 34-239 (465)
44 2nyc_A Nuclear protein SNF4; b 99.6 2.2E-15 7.4E-20 141.9 13.7 132 623-762 7-141 (144)
45 4fry_A Putative signal-transdu 99.6 1.4E-15 4.9E-20 145.9 11.7 125 624-764 7-137 (157)
46 3nd0_A SLL0855 protein; CLC fa 99.6 6.7E-15 2.3E-19 165.7 19.0 191 349-559 31-234 (466)
47 3ddj_A CBS domain-containing p 99.6 2.2E-15 7.7E-20 160.0 14.1 137 621-768 153-291 (296)
48 3l2b_A Probable manganase-depe 99.6 1.3E-15 4.3E-20 157.8 11.0 129 623-762 6-244 (245)
49 2oux_A Magnesium transporter; 99.6 2.1E-15 7.4E-20 160.0 12.6 128 621-769 134-266 (286)
50 4ene_A CLC-EC1, H(+)/CL(-) exc 99.6 1.8E-14 6.3E-19 161.6 20.5 192 348-559 19-224 (446)
51 1vr9_A CBS domain protein/ACT 99.6 7E-15 2.4E-19 149.1 13.8 119 623-762 12-130 (213)
52 2yvy_A MGTE, Mg2+ transporter 99.6 6.3E-15 2.2E-19 155.7 13.5 127 621-768 132-263 (278)
53 3org_A CMCLC; transporter, tra 99.6 4.7E-14 1.6E-18 165.5 18.9 190 349-551 10-210 (632)
54 3t4n_C Nuclear protein SNF4; C 99.5 6.4E-14 2.2E-18 150.7 15.6 134 621-762 184-320 (323)
55 2zy9_A Mg2+ transporter MGTE; 99.5 4E-14 1.4E-18 160.4 14.2 126 622-768 153-283 (473)
56 3pc3_A CG1753, isoform A; CBS, 99.5 3.1E-14 1.1E-18 163.8 12.5 133 619-764 379-513 (527)
57 2yzq_A Putative uncharacterize 99.5 2.4E-14 8.2E-19 150.6 10.4 130 622-762 124-279 (282)
58 3ddj_A CBS domain-containing p 99.5 7.2E-14 2.5E-18 148.3 12.8 123 623-762 92-214 (296)
59 3kh5_A Protein MJ1225; AMPK, A 99.5 3.6E-14 1.2E-18 148.8 10.1 126 623-760 147-279 (280)
60 3kh5_A Protein MJ1225; AMPK, A 99.5 1.8E-13 6.1E-18 143.5 15.1 122 623-761 83-204 (280)
61 2qrd_G Protein C1556.08C; AMPK 99.5 4.7E-13 1.6E-17 144.6 14.8 133 623-763 181-316 (334)
62 2yzq_A Putative uncharacterize 99.4 1.9E-13 6.6E-18 143.7 9.1 117 624-761 1-118 (282)
63 2v8q_E 5'-AMP-activated protei 99.4 1.1E-12 3.8E-17 141.4 13.4 136 617-762 28-177 (330)
64 2v8q_E 5'-AMP-activated protei 99.4 7.5E-13 2.6E-17 142.8 11.5 132 624-763 190-324 (330)
65 3t4n_C Nuclear protein SNF4; C 99.4 1.2E-12 4.2E-17 140.6 12.4 126 625-762 115-248 (323)
66 3usb_A Inosine-5'-monophosphat 99.4 1.7E-12 5.7E-17 148.1 11.8 122 622-762 111-234 (511)
67 4fxs_A Inosine-5'-monophosphat 99.3 6E-13 2.1E-17 151.2 3.8 118 624-760 89-207 (496)
68 2qrd_G Protein C1556.08C; AMPK 99.3 1.6E-11 5.4E-16 132.5 14.6 135 617-762 15-172 (334)
69 1me8_A Inosine-5'-monophosphat 99.3 2.2E-13 7.5E-18 155.4 -0.3 124 620-762 92-221 (503)
70 1zfj_A Inosine monophosphate d 99.3 1.5E-11 5.1E-16 140.3 12.8 120 624-762 90-211 (491)
71 4avf_A Inosine-5'-monophosphat 99.2 5.9E-13 2E-17 151.2 -0.4 120 623-761 87-206 (490)
72 1vrd_A Inosine-5'-monophosphat 99.2 1.2E-12 4.1E-17 149.4 0.2 121 624-762 95-215 (494)
73 4af0_A Inosine-5'-monophosphat 99.2 1.5E-12 5.3E-17 144.5 0.0 113 627-760 141-256 (556)
74 2cu0_A Inosine-5'-monophosphat 99.0 1.9E-11 6.5E-16 139.0 -0.1 114 625-761 94-207 (486)
75 1jcn_A Inosine monophosphate d 99.0 5.6E-12 1.9E-16 144.5 -5.0 121 624-760 108-231 (514)
76 1vr9_A CBS domain protein/ACT 98.8 7.9E-09 2.7E-13 104.4 7.5 122 623-758 71-192 (213)
77 3ghd_A A cystathionine beta-sy 98.7 1.7E-08 5.7E-13 83.2 7.3 64 634-701 2-65 (70)
78 3fio_A A cystathionine beta-sy 98.4 3.8E-07 1.3E-11 74.2 7.3 65 633-701 1-65 (70)
79 4esy_A CBS domain containing m 98.3 4.8E-07 1.7E-11 87.5 5.2 59 690-759 15-73 (170)
80 3ghd_A A cystathionine beta-sy 98.3 1.9E-06 6.5E-11 70.7 7.3 46 709-760 2-47 (70)
81 3nqr_A Magnesium and cobalt ef 98.2 2E-06 7E-11 78.6 7.6 58 622-680 67-124 (127)
82 3i8n_A Uncharacterized protein 98.2 1.9E-06 6.5E-11 79.2 6.9 59 622-681 70-128 (130)
83 3kpb_A Uncharacterized protein 98.2 2.4E-06 8.1E-11 77.2 6.7 58 624-681 62-119 (122)
84 3lhh_A CBS domain protein; str 98.2 2.3E-06 7.7E-11 83.0 6.6 63 690-761 39-102 (172)
85 3jtf_A Magnesium and cobalt ef 98.1 6.3E-06 2.2E-10 75.6 8.8 59 622-681 67-125 (129)
86 3k6e_A CBS domain protein; str 98.1 2.2E-06 7.6E-11 81.8 5.8 60 620-681 82-141 (156)
87 4gqw_A CBS domain-containing p 98.1 3E-06 1E-10 79.4 6.6 60 622-681 83-142 (152)
88 3lfr_A Putative metal ION tran 98.1 5.2E-06 1.8E-10 77.0 8.1 59 622-681 68-126 (136)
89 3lv9_A Putative transporter; C 98.1 5.2E-06 1.8E-10 78.0 8.0 58 623-681 87-144 (148)
90 2ef7_A Hypothetical protein ST 98.1 4.9E-06 1.7E-10 76.4 7.6 59 623-681 66-124 (133)
91 3kxr_A Magnesium transporter, 98.1 5.6E-06 1.9E-10 82.9 8.5 62 622-683 114-175 (205)
92 3gby_A Uncharacterized protein 98.1 2.2E-06 7.6E-11 78.4 5.0 58 624-681 68-125 (128)
93 2d4z_A Chloride channel protei 98.1 5.8E-06 2E-10 85.4 8.4 65 690-763 10-74 (250)
94 3oco_A Hemolysin-like protein 98.1 5.8E-06 2E-10 78.2 7.6 58 623-681 85-142 (153)
95 3sl7_A CBS domain-containing p 98.1 4.3E-06 1.5E-10 80.9 6.8 62 622-683 96-157 (180)
96 3hf7_A Uncharacterized CBS-dom 98.1 4.2E-06 1.5E-10 77.0 6.4 58 623-681 69-126 (130)
97 3lqn_A CBS domain protein; csg 98.0 9.7E-06 3.3E-10 76.1 8.6 60 621-682 84-143 (150)
98 1pbj_A Hypothetical protein; s 98.0 7.2E-06 2.5E-10 74.2 6.7 59 622-681 63-121 (125)
99 3l2b_A Probable manganase-depe 98.0 8E-06 2.7E-10 83.8 7.8 59 692-761 6-64 (245)
100 3fio_A A cystathionine beta-sy 98.0 1.2E-05 4.1E-10 65.1 7.3 47 709-761 2-48 (70)
101 1o50_A CBS domain-containing p 98.0 6.6E-06 2.3E-10 78.1 6.4 59 622-681 94-152 (157)
102 2rc3_A CBS domain; in SITU pro 98.0 7E-06 2.4E-10 75.6 6.3 59 622-681 72-130 (135)
103 2p9m_A Hypothetical protein MJ 98.0 7.9E-06 2.7E-10 75.4 6.5 60 622-681 71-135 (138)
104 2yzi_A Hypothetical protein PH 98.0 1.4E-05 4.9E-10 73.7 7.9 58 690-758 4-61 (138)
105 2rih_A Conserved protein with 98.0 1.2E-05 4.1E-10 74.7 7.4 58 693-761 5-64 (141)
106 2nyc_A Nuclear protein SNF4; b 98.0 9E-06 3.1E-10 75.5 6.3 59 623-681 76-140 (144)
107 2o16_A Acetoin utilization pro 98.0 1.3E-05 4.4E-10 76.5 7.6 59 692-761 4-62 (160)
108 2uv4_A 5'-AMP-activated protei 97.9 1.3E-05 4.5E-10 75.6 7.5 58 623-680 86-149 (152)
109 3oi8_A Uncharacterized protein 97.9 1.4E-05 4.6E-10 76.0 7.2 55 622-677 101-155 (156)
110 3fv6_A YQZB protein; CBS domai 97.9 9.5E-06 3.2E-10 77.3 6.0 61 622-682 79-144 (159)
111 4fry_A Putative signal-transdu 97.9 8.3E-06 2.9E-10 77.3 5.5 60 622-682 76-135 (157)
112 3ocm_A Putative membrane prote 97.9 2E-05 6.9E-10 76.5 8.3 81 668-762 16-97 (173)
113 2emq_A Hypothetical conserved 97.9 2.3E-05 7.8E-10 74.1 8.2 59 621-681 80-138 (157)
114 3usb_A Inosine-5'-monophosphat 97.9 6.9E-05 2.3E-09 85.3 13.4 104 622-738 173-277 (511)
115 3k2v_A Putative D-arabinose 5- 97.9 2.3E-05 7.9E-10 73.6 7.9 60 693-761 28-87 (149)
116 3ctu_A CBS domain protein; str 97.9 1.5E-05 5.3E-10 75.3 6.5 62 692-762 14-75 (156)
117 3fhm_A Uncharacterized protein 97.9 1.4E-05 4.9E-10 76.5 6.3 60 621-681 90-149 (165)
118 1y5h_A Hypothetical protein RV 97.9 1.5E-05 5E-10 73.2 5.9 58 622-680 72-129 (133)
119 2j9l_A Chloride channel protei 97.8 2.5E-05 8.4E-10 75.9 7.4 61 621-682 105-165 (185)
120 1pvm_A Conserved hypothetical 97.8 2E-05 6.8E-10 77.0 6.7 60 622-681 73-132 (184)
121 1me8_A Inosine-5'-monophosphat 97.8 4.8E-06 1.6E-10 94.8 1.9 100 622-735 159-260 (503)
122 1yav_A Hypothetical protein BS 97.8 2.6E-05 8.9E-10 74.1 6.5 59 621-681 83-141 (159)
123 2pfi_A Chloride channel protei 97.8 3.3E-05 1.1E-09 73.3 6.7 63 690-761 10-72 (164)
124 2oux_A Magnesium transporter; 97.7 3.6E-05 1.2E-09 81.0 7.4 61 622-682 199-259 (286)
125 2yvy_A MGTE, Mg2+ transporter 97.7 3.3E-05 1.1E-09 81.0 6.5 60 622-681 197-256 (278)
126 2zy9_A Mg2+ transporter MGTE; 97.7 6.4E-05 2.2E-09 84.9 8.3 61 622-682 217-277 (473)
127 3pc3_A CG1753, isoform A; CBS, 97.5 0.0001 3.4E-09 84.5 7.1 63 690-763 381-445 (527)
128 1zfj_A Inosine monophosphate d 97.4 0.00076 2.6E-08 76.5 12.0 60 622-681 150-210 (491)
129 2cu0_A Inosine-5'-monophosphat 97.3 6.1E-05 2.1E-09 85.4 2.0 100 622-737 148-247 (486)
130 4af0_A Inosine-5'-monophosphat 97.2 0.00012 4.1E-09 81.7 2.8 58 623-680 199-256 (556)
131 4avf_A Inosine-5'-monophosphat 97.2 0.00018 6.2E-09 81.4 4.1 60 622-681 145-206 (490)
132 1vrd_A Inosine-5'-monophosphat 97.1 0.00025 8.7E-09 80.5 3.8 60 622-681 153-214 (494)
133 4fxs_A Inosine-5'-monophosphat 97.0 0.0011 3.8E-08 75.0 8.0 52 695-757 91-142 (496)
134 1jcn_A Inosine monophosphate d 96.4 0.00036 1.2E-08 79.6 -1.1 59 622-680 171-231 (514)
No 1
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=100.00 E-value=2.5e-77 Score=702.59 Aligned_cols=562 Identities=19% Similarity=0.231 Sum_probs=422.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcCCCcccccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 004181 86 VGNSGVIISSCLVGLLTGIGVVLFNKGVHEIRDFFWDGIPYGGASWLREKPIPAIWIRVVLVPACGGFIVSILNQLRYAL 165 (770)
Q Consensus 86 ~~~~~~~l~a~liGv~~G~~a~~f~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~gglivg~l~~~~~~~ 165 (770)
+..+.++++++++|+++|+++.+|+.+++++++++.... .+... ...|+.++++|++++++++++.+..
T Consensus 5 ~~~~r~~~~~~lvGi~~gl~~~~~~~~i~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~--- 73 (632)
T 3org_A 5 MYLLRLVCFLTLLGVTAALFIFAVDLAVHGLEELRMKIS-----RLAGR---FAGYILYVVSGVALCLLSTFWCAVL--- 73 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHSCH---HHHHHHHHHHHHHHHHHHHHHHHHS---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHhhh---hHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 445677889999999999999999999999988653210 00100 1234445678999998888875321
Q ss_pred cCCCCCCcchhhccccCCCCCCCCccccccchhhhcccCCCCCccccchhhhhHHHHHHHHHHHHHHhcCCccCCchhHH
Q 004181 166 SLDDDDDDDVQQVQDKSYPPPHPQAQAKDDISVITVSSTTSLPTIYYDYLKIAFQPLLKAVAACITLGTGNSLGPEGPSV 245 (770)
Q Consensus 166 ~~~~~~g~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~k~~~~~~~lg~G~s~G~EgP~v 245 (770)
.+...|+||||+++......+ +.++..++++.+.|++++++++++|+|+|||||++
T Consensus 74 -~p~a~GsGIp~v~~~l~g~~~-----------------------~~~~~~~~~~~~~K~~~~~l~igsG~s~GrEGP~v 129 (632)
T 3org_A 74 -STEAEGSGLPQMKSILSGFYD-----------------------KMRSALELRVLFAKALGLICAIGGGLPVGWEGPNV 129 (632)
T ss_dssp -CGGGCBCSHHHHHHHTTTTHH-----------------------HHGGGGSHHHHHHHHHHHHHHHHTTCSCBSHHHHH
T ss_pred -CCccCCCCHHHHHHHHhCccc-----------------------cccccccHHHHHHHHHHHHHHHhcCCCccccchHH
Confidence 223457789999863211000 01334566788999999999999999999999999
Q ss_pred HHHHHHHHHHHh--hcc---CCccchhhHhhcccchhHHhhccchhhHHHHHHhhcccccccccchhhhhhhHHHHHHHH
Q 004181 246 EIGKSIAKGVGN--LFD---RRPRRKVSLVAAGSAAGISSGFNAAVAGCFFAVESVIWPSSAADSSASLAYTTSMVILSA 320 (770)
Q Consensus 246 ~iga~ig~~l~~--~~~---~~~~~~r~l~~~G~aagiaa~F~aPl~g~lf~~E~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (770)
|+||++|+.+++ +|+ .++.+||.+++||+|||+||+||||+||++|++|++..++ +.++++ +.+++|
T Consensus 130 qiGa~ig~~~~~~~~f~~~~~~~~~~r~ll~aGaaAG~aaaF~aPlaGvlFalE~~~~~~-------~~~~~~-~~~~as 201 (632)
T 3org_A 130 HIACIIAHQFYRLGVFKELCTDRALRLQTLAAACAVGLASSFGAPLGGVLYSIETIASFY-------LVQAFW-KGVLSA 201 (632)
T ss_dssp HHHHHHHHHHTTSHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTCSEE-------ETTHHH-HHHHHH
T ss_pred HHHHHHHHHHhhhhhhccccCCHHHHHHHHHHHHHHHHHHHhCCccHhHHHHHHHHHHHH-------hHHHHH-HHHHHH
Confidence 999999999999 776 4777899999999999999999999999999999997542 223444 467899
Q ss_pred HHHHHHHhhhcCCCC---cccC--C-ccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhHHHH
Q 004181 321 VIASVVSEVGLGSEP---AFKV--P-EYDFRSPGELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNGIPKAVFPV 394 (770)
Q Consensus 321 ~~a~~v~~~~~g~~~---~f~~--~-~~~~~~~~~l~~~illGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (770)
++|+++++.+.+... .|.. + +.+ +++.++ +++++|++||++|.+|++++.++.++ ++.+..+.+++++++
T Consensus 202 ~~a~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l-~~~~lGi~~Gl~g~~f~~~~~~~~~~--~~~~~~~~~~~~~~~ 277 (632)
T 3org_A 202 LSGAIVYELLYTTPLVEAFEGTNFDASDV-SRTQTL-LYAILGALMGVLGALFIRCVRSIYEL--RMRHYPGTNRYFLVG 277 (632)
T ss_dssp HHHHHHTTC------------------CC-CCSCTH-HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHSSTTCCTHHHHH
T ss_pred HHHHHHHHHhccCccccccccccccccCC-CcHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhcchhHHHHHH
Confidence 999998886544322 2221 1 122 256788 99999999999999999998877654 222223345677888
Q ss_pred HHHHHHHHHHHHhcccccC--CHHHHHHHHccCCCcc--CccHHHHHHHHHHHHHHHHHhhhcCCccceechHHHHHHHH
Q 004181 395 MGGLAVGLIALMFPEILYW--GFENVDILLESRPFVK--GLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAAT 470 (770)
Q Consensus 395 l~gl~vg~i~~~~P~~~g~--G~~~i~~l~~~~~~~~--~~~~~~l~~~~~~K~~~t~lt~gsG~~gG~f~P~l~iGa~~ 470 (770)
+++++++ .+.+|+..|. +++.++.++++..+.. ...+..++.++++|+++|++|+|+|+|||+|+|++++||++
T Consensus 278 ~~~~~~~--~l~~p~~~g~~~~~~~i~~l~~~~~~~~~~~~~~~~l~~~~~~k~~~t~~s~g~g~pGGif~P~l~iGA~~ 355 (632)
T 3org_A 278 VVALFAS--ALQYPFRLFALDPRATINDLFKAVPLYQTDHFGWTELILMPIIKFILVALSIGLPLPAGVFVPSFLIGAGF 355 (632)
T ss_dssp HHHHHHH--HHTTTC------CHHHHHHHHSCC----------CCSSHHHHHHHHHHHHHTTSSSBCBCHHHHHHHHHHH
T ss_pred HHHHHHH--HHHHHHHhcCCcHHHHHHHHHcCCccccccchhHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHH
Confidence 8887776 3568987665 6888988887653311 12223466778999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhhcCCCccccccccccchHHHHHHHHHHHHHHHcCchHHHHHHHHHHhCCcchHHHHHHHHHHHHHHhh
Q 004181 471 GMAYGKFINFAIAQSNPTIHFSILEVASPQAYGLVGMAATLAGVCQVPLTSVLLLFELTQDYRIVLPLLGAVGLSSWFTS 550 (770)
Q Consensus 471 G~~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~alvGaaA~la~~~~aPls~~vi~~Eltg~~~~~lPlm~a~~ia~~v~~ 550 (770)
|+++|.+++.++|. ..+|+.||++||||+++|++|+|++++ |++||||++++++|+|+++++|+++++
T Consensus 356 G~~~g~~~~~~~p~-----------~~~p~~~a~vGmaa~~~~v~~ap~t~v-i~~E~tg~~~~~lpl~ia~~~a~~v~~ 423 (632)
T 3org_A 356 GRLYGELMRVVFGN-----------AIVPGSYAVVGAAAFTAGVTRALSCAV-IIFEVTGQIRHLVPVLISVLLAVIVGN 423 (632)
T ss_dssp HHHHHHHHHHHHCT-----------TSCHHHHHHHHHHHHHHHHSCCTTHHH-HHHHHTCCCSCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCc-----------ccchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCChhHHHHHHHHHHHHHHHHH
Confidence 99999999887764 257899999999999999999999875 899999999999999999999999987
Q ss_pred hccccccchhhHHHhhhccccccchhhhccccccCCcccccccchhhhhccccccccccccccchhhhhhcccccccccc
Q 004181 551 GQMRRRDVKETKVAVHANTNRKRQFEIYTSRTRGLSSSDLLAEEEPYAINLCEVESSLCIDDWNLEVEELKRRVFVSEVM 630 (770)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dll~~~~~~~~~l~~~~s~~~l~d~~~~~~~~l~~i~V~diM 630 (770)
.+ ++++|+..... ++++. .+ +. ..+..++++|+|+|
T Consensus 424 ~~--~~~iY~~~~~~-----------------k~lp~----------l~------------~~---~~~~~~~~~V~diM 459 (632)
T 3org_A 424 AF--NRSLYETLVLM-----------------KHLPY----------MP------------IL---RRDRSPEMTAREIM 459 (632)
T ss_dssp HH--CCCHHHHHHHH-----------------TTCCE----------EE------------EE---CTTCCTTSBHHHHC
T ss_pred Hh--CCCHHHHHHHh-----------------cCCCc----------cc------------cc---cccccccCcHHHHh
Confidence 64 46888865432 11110 00 00 11223678999999
Q ss_pred c--cceeEEeCCCCHHHHHHHHH-hcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhh-h-------------------
Q 004181 631 R--TRYVTVLMTTLLIEALTLML-AEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAK-T------------------- 687 (770)
Q Consensus 631 ~--~~~~~v~~~~tl~eal~~m~-~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~-~------------------- 687 (770)
+ +++++++++++++|+.+.|. +++++.+||+|++++++|+||++|+.+.+.+.... .
T Consensus 460 ~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 539 (632)
T 3org_A 460 HPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVLLDAADLSE 539 (632)
T ss_dssp BCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC------------------------
T ss_pred hcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhcccccccccceeccCHHHHHh
Confidence 9 89999999999999999999 79999999999999999999999998765321000 0
Q ss_pred ---ccc--------------------cccccccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCC
Q 004181 688 ---SRS--------------------KKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQR 744 (770)
Q Consensus 688 ---~~~--------------------~~~~V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~ 744 (770)
... .+.+++|+|++ ++.++++|+++.|+.++|.+++.+++||+| +
T Consensus 540 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~------~pitV~~~~~l~ea~~~M~~~~i~~lpVve------~ 607 (632)
T 3org_A 540 NIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDV------SPIVVTSYSLVRQLHFLFVMLMPSMIYVTE------R 607 (632)
T ss_dssp -------------------------------CCSCCC------CCCEEETTCBHHHHHHHHHHTCCSEEEEEE------T
T ss_pred hcccCCCCCcccchhhhcccceEeeccccccchhhcC------CCceecCCCcHHHHHHHHHhcCCCEEEEEE------C
Confidence 000 00136778887 899999999999999999999999999994 7
Q ss_pred CeEEEEEeHHHHHHHHHHHH
Q 004181 745 GQLVGLLDRESIILACRALA 764 (770)
Q Consensus 745 g~lvGIIT~~DIl~~~~~~~ 764 (770)
|+++|+||++|+++++.+..
T Consensus 608 G~lvGIVT~~Dll~~~~~~~ 627 (632)
T 3org_A 608 GKLVGIVEREDVAYGYSNSL 627 (632)
T ss_dssp TEEEEEEEGGGTEECCCC--
T ss_pred CEEEEEEehhhHHHHHhhhH
Confidence 99999999999988765543
No 2
>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
Probab=100.00 E-value=1.3e-64 Score=572.52 Aligned_cols=417 Identities=22% Similarity=0.335 Sum_probs=347.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcCCCcccccCCCchh-HHHHHHHHHHHHHHHHHHHHHHhhhc
Q 004181 88 NSGVIISSCLVGLLTGIGVVLFNKGVHEIRDFFWDGIPYGGASWLREKPIPAI-WIRVVLVPACGGFIVSILNQLRYALS 166 (770)
Q Consensus 88 ~~~~~l~a~liGv~~G~~a~~f~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~p~~gglivg~l~~~~~~~~ 166 (770)
.+.++++++++|+++|+++.+|+.+++++++++++..+... ....+ |..++++|+++|++++++.+.. .
T Consensus 32 ~~~~~~~~~liGv~~Gl~~~~f~~~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ll~~~l~~~~--~- 101 (465)
T 1ots_A 32 PLAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTA-------DNYPLLLTVAFLCSAVLAMFGYFLVRKY--A- 101 (465)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-------SSHHHHHHHHHHHHHHHHHHHHHHHHHH--C-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-------cccccHHHHHHHHHHHHHHHHHHHHHHh--C-
Confidence 35678899999999999999999999999999887532110 00123 4334678989898888876421 1
Q ss_pred CCCCCCcchhhccccCCCCCCCCccccccchhhhcccCCCCCccccchhhhhHHHHHHHHHHHHHHhcCCccCCchhHHH
Q 004181 167 LDDDDDDDVQQVQDKSYPPPHPQAQAKDDISVITVSSTTSLPTIYYDYLKIAFQPLLKAVAACITLGTGNSLGPEGPSVE 246 (770)
Q Consensus 167 ~~~~~g~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~k~~~~~~~lg~G~s~G~EgP~v~ 246 (770)
+...|+++||+++..... ++...+++.+.|++++++++++|+|+|||||++|
T Consensus 102 -p~a~GsGip~v~~~l~~~---------------------------~~~~~~r~~~~k~~~~~lti~sG~s~GrEGP~vq 153 (465)
T 1ots_A 102 -PEAGGSGIPEIEGALEDQ---------------------------RPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQ 153 (465)
T ss_dssp -GGGSSCSHHHHHHHHTTC---------------------------SCCCHHHHHHHHHHHHHHHHHTTCSCBSHHHHHH
T ss_pred -ccccCCChHHHHHHHhCC---------------------------CCCCcHHHHHHHHHHHHHHHhcCCCcCCcchHHH
Confidence 223466799988632110 1122345778999999999999999999999999
Q ss_pred HHHHHHHHHHhhccC-CccchhhHhhcccchhHHhhccchhhHHHHHHhhcccccccccchhhhhhhHHHHHHHHHHHHH
Q 004181 247 IGKSIAKGVGNLFDR-RPRRKVSLVAAGSAAGISSGFNAAVAGCFFAVESVIWPSSAADSSASLAYTTSMVILSAVIASV 325 (770)
Q Consensus 247 iga~ig~~l~~~~~~-~~~~~r~l~~~G~aagiaa~F~aPl~g~lf~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 325 (770)
+|+++|++++|++++ +++++|.+++||+|||+||+||||++|++|++|++..++.. ..+++. +++++|++|++
T Consensus 154 iGa~ig~~l~~~~~l~~~~~~r~li~~GaaAGlaAaF~APlaGvlFalE~l~~~~~~-----~~~~~~-~~~~as~~a~~ 227 (465)
T 1ots_A 154 IGGNIGRMVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRY-----TLISIK-AVFIGVIMSTI 227 (465)
T ss_dssp HHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTTTSCSSSC-----CCCCHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHCCchHHHHHHHHHHHHhcch-----HHHHHH-HHHHHHHHHHH
Confidence 999999999999995 88999999999999999999999999999999999754321 112244 46889999999
Q ss_pred HHhhhcCCCCcccCCccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhHHHHHHHHHHHHHHH
Q 004181 326 VSEVGLGSEPAFKVPEYDFRSPGELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNGIPKAVFPVMGGLAVGLIAL 405 (770)
Q Consensus 326 v~~~~~g~~~~f~~~~~~~~~~~~l~~~illGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gl~vg~i~~ 405 (770)
+++.++|+++.|.++.++..+..++++++++|++||++|.+|++++.+..++++++.+..+++++++++++|++++++.+
T Consensus 228 v~~~~~G~~~~f~~~~~~~~~~~~l~~~illGi~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gl~~g~l~~ 307 (465)
T 1ots_A 228 MYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGF 307 (465)
T ss_dssp HHHHHSCSCCSSCCCCCCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCceeecCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHHHHHHHHHHH
Confidence 99998999999998877666778999999999999999999999998888877765432112234789999999999999
Q ss_pred HhcccccCCHHHHHHHHccCCCccCccHHHHHHHHHHHHHHHHHhhhcCCccceechHHHHHHHHhHHHHHHHHHhhhcC
Q 004181 406 MFPEILYWGFENVDILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIAQS 485 (770)
Q Consensus 406 ~~P~~~g~G~~~i~~l~~~~~~~~~~~~~~l~~~~~~K~~~t~lt~gsG~~gG~f~P~l~iGa~~G~~~g~~~~~~~~~~ 485 (770)
++|+.+|+|++.++.+++++ .+...++.++++|+++|++|+|+|+|||+|+|++++||++|+++|.+++.++|.
T Consensus 308 ~~P~~lG~G~~~i~~~~~~~-----~~~~~l~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~p~- 381 (465)
T 1ots_A 308 VAPATSGGGFNLIPIATAGN-----FSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQ- 381 (465)
T ss_dssp HCGGGSSCSTTHHHHHHHTC-----SCHHHHHHHHHHHHHHHHHHHHTTCSSBSHHHHHHHHHHHHHHHHHHHHHHCGG-
T ss_pred HhHhhcCChHHHHHHHHcCC-----chHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHHHHHHHHHHHHHHHHHCCc-
Confidence 99999999999999998764 466678888999999999999999999999999999999999999999988775
Q ss_pred CCccccccccccchHHHHHHHHHHHHHHHcCchHHHHHHHHHHhCCcchHHHHHHHHHHHHHHhhhccccccchhhHHH
Q 004181 486 NPTIHFSILEVASPQAYGLVGMAATLAGVCQVPLTSVLLLFELTQDYRIVLPLLGAVGLSSWFTSGQMRRRDVKETKVA 564 (770)
Q Consensus 486 ~~~~~~~~~~~~~p~~~alvGaaA~la~~~~aPls~~vi~~Eltg~~~~~lPlm~a~~ia~~v~~~~~~~~~~~~~~~~ 564 (770)
...+|+.||++||+|+++|++|+|+|++++++|+||++++++|+|+++++|+++++.+ .++++|+....
T Consensus 382 ---------~~~~~~~~alvGmaa~~a~v~raPlt~ivlv~Eltg~~~~llpl~ia~~iA~~v~~~~-~~~~iY~~~l~ 450 (465)
T 1ots_A 382 ---------YHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFT-GGKPLYSAILA 450 (465)
T ss_dssp ---------GTCCHHHHHHHHHTHHHHHTSCCHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHTT-TCCCHHHHHHH
T ss_pred ---------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHH
Confidence 3468999999999999999999999999999999999999999999999999988653 57889987544
No 3
>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A
Probab=100.00 E-value=3.2e-64 Score=567.30 Aligned_cols=416 Identities=22% Similarity=0.342 Sum_probs=340.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcCCCcccccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 004181 87 GNSGVIISSCLVGLLTGIGVVLFNKGVHEIRDFFWDGIPYGGASWLREKPIPAIWIRVVLVPACGGFIVSILNQLRYALS 166 (770)
Q Consensus 87 ~~~~~~l~a~liGv~~G~~a~~f~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~gglivg~l~~~~~~~~ 166 (770)
.+..+++.++++|+++|+++.+|+.+++++++++++..... ...+ ...|..+++++.+++++.+++. +.+
T Consensus 27 ~~~~l~l~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~-----~~~~-~~~~~l~~~~~~~~~~l~~~l~--~~~-- 96 (466)
T 3nd0_A 27 LHPRTLVAAIVVGLITGVLGAGFKSAVNNMLQWRSQLAQIL-----APIP-PLAWLVTALISGGMVALSFWLM--KRF-- 96 (466)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----TTSC-THHHHHHHHHHHHHHHHHHHHH--TTT--
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----cccc-HHHHHHHHHHHHHHHHHHHHHH--HHH--
Confidence 34567899999999999999999999999999988753221 1111 0123322334444455455443 222
Q ss_pred CCCCCCcchhhccccCCCCCCCCccccccchhhhcccCCCCCccccchhhhhHHHHHHHHHHHHHHhcCCccCCchhHHH
Q 004181 167 LDDDDDDDVQQVQDKSYPPPHPQAQAKDDISVITVSSTTSLPTIYYDYLKIAFQPLLKAVAACITLGTGNSLGPEGPSVE 246 (770)
Q Consensus 167 ~~~~~g~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~k~~~~~~~lg~G~s~G~EgP~v~ 246 (770)
.+...|+++||+++..... +.....++...|++++++++++|+|+|||||++|
T Consensus 97 ~p~a~GsGIp~v~~~l~g~---------------------------~~~~~~~~~~~k~~~~~ltig~G~S~GrEGP~vq 149 (466)
T 3nd0_A 97 APDTSGSGIPQIEGHLEGK---------------------------LPLVWQRVLPIKLVGGFLSLGAGMLAGFEGPTIQ 149 (466)
T ss_dssp CGGGSBCSHHHHHHHTTSS---------------------------SCCCHHHHHHHHHHHHHHHHHTTCSCCTHHHHHH
T ss_pred CCCcCCCCHHHHHHHHcCC---------------------------CCCchHHHHHHHHHHHHHHHhcCCCCCCcchHHH
Confidence 2234567799998642211 1122245678899999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCccchhhHhhcccchhHHhhccchhhHHHHHHhhcccccccccchhhhhhhHHHHHHHHHHHHHH
Q 004181 247 IGKSIAKGVGNLFDRRPRRKVSLVAAGSAAGISSGFNAAVAGCFFAVESVIWPSSAADSSASLAYTTSMVILSAVIASVV 326 (770)
Q Consensus 247 iga~ig~~l~~~~~~~~~~~r~l~~~G~aagiaa~F~aPl~g~lf~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v 326 (770)
+|+++|++++|+++++++++|.+++||+|||+||+||||++|++|++|++..++.. +...+. +++++|++|+++
T Consensus 150 iGa~ig~~l~~~~~~~~~~~r~ll~aGaAAGlaAaF~APlaGvlFalE~l~~~~~~-----~~~~~~-~~~~as~~a~~v 223 (466)
T 3nd0_A 150 MGGSIGQMTGGWFKATQENQRILIAVGAGAGLATAFNAPLAGVALIGEEMHPRFRS-----QTLAYH-SLLFGCVMATII 223 (466)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHSSSCCCCSS-----CCTTHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhCCchHHHHHHHHhhhccccH-----HHHHHH-HHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998754321 122333 478899999999
Q ss_pred HhhhcCCCCcccCCccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhHHHHHHHHHHHHHHHH
Q 004181 327 SEVGLGSEPAFKVPEYDFRSPGELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNGIPKAVFPVMGGLAVGLIALM 406 (770)
Q Consensus 327 ~~~~~g~~~~f~~~~~~~~~~~~l~~~illGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gl~vg~i~~~ 406 (770)
++.+.|+++.|.+++++..+..++++++++|++||++|.+|++++.+..++++++.+ .+++++++++|++++++.++
T Consensus 224 ~~~~~g~~~~f~~~~~~~~~~~~l~~~illGi~~Gl~g~lf~~~~~~~~~~~~~~~~---~~~~~~~~l~g~~~g~l~~~ 300 (466)
T 3nd0_A 224 LRMIRGQSAIISLTEFKRVPLDSLWMFIILGILFGVMGYTFNRGLFKVLDWFDRLPP---LATKWKGFLLGSIIGILSLF 300 (466)
T ss_dssp HHHHTCSSCSSCCTTCCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCH---HHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHcCCCCceecCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc---ccHHHHHHHHHHHHHHHHHH
Confidence 999999999999887666678899999999999999999999998877666554321 34667889999999999999
Q ss_pred hcccccCCHHHHHHHHccCCCccCccHHHHHHHHHHHHHHHHHhhhcCCccceechHHHHHHHHhHHHHHHHHHhhhcCC
Q 004181 407 FPEILYWGFENVDILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIAQSN 486 (770)
Q Consensus 407 ~P~~~g~G~~~i~~l~~~~~~~~~~~~~~l~~~~~~K~~~t~lt~gsG~~gG~f~P~l~iGa~~G~~~g~~~~~~~~~~~ 486 (770)
+|+.+|+|++.++.+++++ .+...++.++++|+++|++|+|+|+|||+|+|++++||++|+++|.+++.++|.
T Consensus 301 ~p~~~G~G~~~i~~~~~~~-----~~~~~L~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~p~-- 373 (466)
T 3nd0_A 301 PLPLTDGGDNAVLWAFNSQ-----SHFSTLILVFCGRFLLTLICYGSGAIGGIFAPMLGIASIVSVAMARHFHLLFPS-- 373 (466)
T ss_dssp SSSCSSSSHHHHHHHTTSC-----CCHHHHHHHHHHHHHHHHHHHHTTCBCCSHHHHHHHHHHHHHHHHHHHHHHCTT--
T ss_pred HHHHcCCcHHHHHHHHcCC-----ccHHHHHHHHHHHHHHHHHHHhCCCCCceehHHHHHHHHHHHHHHHHHHHhCCc--
Confidence 9999999999999988764 466778889999999999999999999999999999999999999999988774
Q ss_pred CccccccccccchHHHHHHHHHHHHHHHcCchHHHHHHHHHHhCCcchHHHHHHHHHHHHHHhhhccccccchhhHHH
Q 004181 487 PTIHFSILEVASPQAYGLVGMAATLAGVCQVPLTSVLLLFELTQDYRIVLPLLGAVGLSSWFTSGQMRRRDVKETKVA 564 (770)
Q Consensus 487 ~~~~~~~~~~~~p~~~alvGaaA~la~~~~aPls~~vi~~Eltg~~~~~lPlm~a~~ia~~v~~~~~~~~~~~~~~~~ 564 (770)
...+|+.|+++||+|++++++|+|+|++++++|+||++++++|+|+++++|+++++. +.++++|+....
T Consensus 374 --------~~~~~~~~a~vGmaa~~a~v~~aPlt~ivlv~Eltg~~~~~lpl~ia~~iA~~v~~~-~~~~~iY~~~l~ 442 (466)
T 3nd0_A 374 --------QIPEPAVMAIAGMGALVAATVRAPLTAILLTIEMTDNYFVILPLLVTCLVASVVAEA-LGGKPIYTVLLE 442 (466)
T ss_dssp --------TCSSTHHHHHHTTSHHHHHHHSCHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHTT-SCCCCHHHHHHH
T ss_pred --------cccCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHCChHHHHHHHHHHHHHHHHHHH-hCCCChHHHHHH
Confidence 246799999999999999999999999999999999999999999999999998864 467899997654
No 4
>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...
Probab=100.00 E-value=1.4e-63 Score=560.61 Aligned_cols=415 Identities=22% Similarity=0.335 Sum_probs=337.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcCCCcccccCCCchhHHH---HHHHHHHHHHHHHHHHHHHhh
Q 004181 88 NSGVIISSCLVGLLTGIGVVLFNKGVHEIRDFFWDGIPYGGASWLREKPIPAIWIR---VVLVPACGGFIVSILNQLRYA 164 (770)
Q Consensus 88 ~~~~~l~a~liGv~~G~~a~~f~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~p~~gglivg~l~~~~~~ 164 (770)
...+++.++++|+++|+++.+|+.+++++++++++....... .+|+. +++++.+++++++++.+. +
T Consensus 17 ~~~~~~~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~l~~~--~ 85 (446)
T 4ene_A 17 PLAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTAD---------NYPLLLTVAFLCSAVLAMFGYFLVRK--Y 85 (446)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS---------SHHHHHHHHHHHHHHHHHHHHHHHHH--H
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---------cchHHHHHHHHHHHHHHHHHHHHHHH--h
Confidence 456788999999999999999999999999998865322110 12322 233445556666666432 2
Q ss_pred hcCCCCCCcchhhccccCCCCCCCCccccccchhhhcccCCCCCccccchhhhhHHHHHHHHHHHHHHhcCCccCCchhH
Q 004181 165 LSLDDDDDDDVQQVQDKSYPPPHPQAQAKDDISVITVSSTTSLPTIYYDYLKIAFQPLLKAVAACITLGTGNSLGPEGPS 244 (770)
Q Consensus 165 ~~~~~~~g~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~k~~~~~~~lg~G~s~G~EgP~ 244 (770)
. +...|+++||+++.... .++.+.+++...|++++++++++|+|+|||||+
T Consensus 86 ~--p~a~GsGip~v~~~l~~---------------------------~~~~~~~r~~~~k~~~~~lti~~G~s~GrEGP~ 136 (446)
T 4ene_A 86 A--PEAGGSGIPEIEGALED---------------------------QRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPT 136 (446)
T ss_dssp C--GGGSSCSHHHHHHHHHT---------------------------CSCCCHHHHHHHHHHHHHHHHHTTCSCBSHHHH
T ss_pred C--cccCCCCHHHHHHHHhC---------------------------CCccchHHHHHHHHHHHHHHHhcCCccCCcchH
Confidence 2 22346779998753110 012233456788999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCccchh-hHhhcccchhHHhhccchhhHHHHHHhhcccccccccchhhhhhhHHHHHHHHHHH
Q 004181 245 VEIGKSIAKGVGNLFDRRPRRKV-SLVAAGSAAGISSGFNAAVAGCFFAVESVIWPSSAADSSASLAYTTSMVILSAVIA 323 (770)
Q Consensus 245 v~iga~ig~~l~~~~~~~~~~~r-~l~~~G~aagiaa~F~aPl~g~lf~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 323 (770)
+|+|+++|++++|+++++++++| .+++||+|||+||+||||++|++|++|++..+.. ++++++. +++++|++|
T Consensus 137 vqiGa~ig~~~~~~~~~~~~~~r~~ll~aGaaAG~aaaF~aPlaGvlFalE~l~~~~~-----~~~~~~~-~~~~as~~a 210 (446)
T 4ene_A 137 VQIGGNIGRMVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFR-----YTLISIK-AVFIGVIMS 210 (446)
T ss_dssp HHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTSCSSS-----CCCCCHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhCCcchHHHHHHHHHHhhcc-----hhHHHHH-HHHHHHHHH
Confidence 99999999999999998888886 9999999999999999999999999999864321 1113344 468899999
Q ss_pred HHHHhhhcCCCCcccCCccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchhHHHHHHHHHHHHH
Q 004181 324 SVVSEVGLGSEPAFKVPEYDFRSPGELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNGIPKAVFPVMGGLAVGLI 403 (770)
Q Consensus 324 ~~v~~~~~g~~~~f~~~~~~~~~~~~l~~~illGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gl~vg~i 403 (770)
+++++.+.|+++.|++++++..+..+++.++++|++||++|.+|++++.+..++++++.+....+..+.+.++|++++++
T Consensus 211 ~~v~~~~~g~~~~~~~~~~~~~~~~~l~~~illGi~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~l 290 (446)
T 4ene_A 211 TIMYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLL 290 (446)
T ss_dssp HHHHHHTTTTCCSCCCCCCCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHH
Confidence 99999999999999998877667789999999999999999999999988887777654321111122334667788889
Q ss_pred HHHhcccccCCHHHHHHHHccCCCccCccHHHHHHHHHHHHHHHHHhhhcCCccceechHHHHHHHHhHHHHHHHHHhhh
Q 004181 404 ALMFPEILYWGFENVDILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIA 483 (770)
Q Consensus 404 ~~~~P~~~g~G~~~i~~l~~~~~~~~~~~~~~l~~~~~~K~~~t~lt~gsG~~gG~f~P~l~iGa~~G~~~g~~~~~~~~ 483 (770)
.+++|+.+|+||+.++++++++ .+...++.++++|+++|++|+|+|+|||+|+|++++||++|+++|.+++.++|
T Consensus 291 ~~~~p~~~G~G~~~i~~~~~~~-----~~~~~L~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~p 365 (446)
T 4ene_A 291 GFVAPATSGGGFNLIPIATAGN-----FSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFP 365 (446)
T ss_dssp HHHCGGGSSCCSTHHHHHHTTC-----SCHHHHHHHHHHHHHHHHHHHTTTCSSBSHHHHHHHHHHHHHHHHHHHHHHCG
T ss_pred HHHhHhhcCCcHHHHHHHHcCC-----chHHHHHHHHHHHHHHHHHHHccCCCcchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999988764 46677888999999999999999999999999999999999999999998877
Q ss_pred cCCCccccccccccchHHHHHHHHHHHHHHHcCchHHHHHHHHHHhCCcchHHHHHHHHHHHHHHhhhccccccchhhHH
Q 004181 484 QSNPTIHFSILEVASPQAYGLVGMAATLAGVCQVPLTSVLLLFELTQDYRIVLPLLGAVGLSSWFTSGQMRRRDVKETKV 563 (770)
Q Consensus 484 ~~~~~~~~~~~~~~~p~~~alvGaaA~la~~~~aPls~~vi~~Eltg~~~~~lPlm~a~~ia~~v~~~~~~~~~~~~~~~ 563 (770)
. ...+|+.|+++||+|+++|++|+|+|++++++|+||++++++|+|+++++|+++++. +.++++||...
T Consensus 366 ~----------~~~~~~~~a~vGmaa~~a~~~~aPlt~~vl~~Eltg~~~~~lpl~ia~~ia~~v~~~-~~~~~iY~~~l 434 (446)
T 4ene_A 366 Q----------YHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQF-TGGKPLYSAIL 434 (446)
T ss_dssp G----------GTCCHHHHHHHHHTHHHHHHTCCHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHH-TTCCCHHHHHH
T ss_pred c----------cccCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHCChhHHHHHHHHHHHHHHHHHH-hCCCChHHHHH
Confidence 5 246899999999999999999999999999999999999999999999999999865 46789999754
Q ss_pred H
Q 004181 564 A 564 (770)
Q Consensus 564 ~ 564 (770)
.
T Consensus 435 ~ 435 (446)
T 4ene_A 435 A 435 (446)
T ss_dssp H
T ss_pred H
Confidence 3
No 5
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.78 E-value=5.8e-19 Score=172.52 Aligned_cols=130 Identities=26% Similarity=0.322 Sum_probs=113.0
Q ss_pred hhccccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHh--------------
Q 004181 619 ELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQ-------------- 684 (770)
Q Consensus 619 ~~l~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~-------------- 684 (770)
..+++++|+|+|+++++++++++|+.+|++.|.+++++.+||+|++|+++|+||.+|+.+......
T Consensus 13 ~~l~~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~ 92 (170)
T 4esy_A 13 RAIRQVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIPA 92 (170)
T ss_dssp HHHHTSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCH
T ss_pred HHHcCCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccch
Confidence 457789999999999999999999999999999999999999999999999999999976431100
Q ss_pred ----hhhccccccccccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHH
Q 004181 685 ----AKTSRSKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILAC 760 (770)
Q Consensus 685 ----~~~~~~~~~~V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~ 760 (770)
.......+.+++++|++ ++.++++++++.+|+++|.+++++++||+| +|+++|+||++||++++
T Consensus 93 ~~~~~~~~~~~~~~v~~im~~------~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd------~g~lvGivt~~Dil~~l 160 (170)
T 4esy_A 93 PEVEHLFETGRKLTASAVMTQ------PVVTAAPEDSVGSIADQMRRHGIHRIPVVQ------DGVPVGIVTRRDLLKLL 160 (170)
T ss_dssp HHHHHHHHHHTTCBHHHHCBC------CSCCBCTTSBHHHHHHHHHHTTCSEEEEEE------TTEEEEEEEHHHHTTTS
T ss_pred hhHHhhhccccccchhhhccc------CcccCCcchhHHHHHHHHHHcCCcEEEEEE------CCEEEEEEEHHHHHHHH
Confidence 00112345678999998 899999999999999999999999999998 68999999999999875
No 6
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.75 E-value=1.2e-17 Score=158.90 Aligned_cols=124 Identities=15% Similarity=0.151 Sum_probs=112.6
Q ss_pred hcccccccccccc--ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCC-CcEEEEEehHHHHHHHHHHhhhhccccccccc
Q 004181 620 LKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKKLLVS 696 (770)
Q Consensus 620 ~l~~i~V~diM~~--~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~ 696 (770)
.+...+|+|+|++ +++++++++++.++++.|.+++++.+||+|++ ++++|+||.+|+.+.+.... +.+++
T Consensus 19 ~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~-------~~~v~ 91 (148)
T 3lv9_A 19 EFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN-------KIELE 91 (148)
T ss_dssp GGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-------CCCGG
T ss_pred ccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC-------CccHH
Confidence 3667899999998 99999999999999999999999999999988 89999999999998765321 56789
Q ss_pred cccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 697 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 697 dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
++| + ++.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++++..
T Consensus 92 ~~m-~------~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-----~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 92 EIL-R------DIIYISENLTIDKALERIRKEKLQLAIVVDE-----YGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp GTC-B------CCEEEETTSBHHHHHHHHHHHTCSEEEEECT-----TSSEEEEEEHHHHHHHHHH
T ss_pred Hhc-C------CCeEECCCCCHHHHHHHHHhcCCeEEEEEeC-----CCCEEEEEEHHHHHHHHhC
Confidence 999 5 6899999999999999999999999999997 7999999999999998754
No 7
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.75 E-value=4.8e-18 Score=163.97 Aligned_cols=128 Identities=17% Similarity=0.203 Sum_probs=112.1
Q ss_pred ccccccccc--ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhcccccccccccccc
Q 004181 624 VFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSA 701 (770)
Q Consensus 624 i~V~diM~~--~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~ 701 (770)
.+++++|++ +++++++++|+.+|++.|.+++++++||+|++++++|+||.+|+.+.+...........+.+++++|.+
T Consensus 15 ~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~im~~ 94 (156)
T 3k6e_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTKT 94 (156)
T ss_dssp TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGTCBC
T ss_pred ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHHhhcC
Confidence 468899986 899999999999999999999999999999999999999999999887654433334556789999998
Q ss_pred CCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHH
Q 004181 702 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALA 764 (770)
Q Consensus 702 ~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~ 764 (770)
++.++++++++.+|+++|.+++ .+||||+ +|+++|+||++|+++++....
T Consensus 95 ------~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~-----~g~l~GiiT~~Dil~~~~~~~ 144 (156)
T 3k6e_A 95 ------DVAVVSPDFTITEVLHKLVDES--FLPVVDA-----EGIFQGIITRKSILKAVNALL 144 (156)
T ss_dssp ------SCCCBCTTCCHHHHHHHTTTSS--EEEEECT-----TSBEEEEEEHHHHHHHHHHHS
T ss_pred ------CceecccccHHHHHHHHHHHcC--CeEEEec-----CCEEEEEEEHHHHHHHHHHHh
Confidence 7899999999999999998776 5999997 899999999999999987654
No 8
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.74 E-value=2e-17 Score=154.23 Aligned_cols=128 Identities=23% Similarity=0.336 Sum_probs=113.5
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhcccccccccccccc
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSA 701 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~ 701 (770)
++++|+++|.++++++++++++.++++.|.+++.+.+||+| +++++|+|+.+|+.+.+.... ..+.+++++|.+
T Consensus 2 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~-----~~~~~v~~~~~~ 75 (133)
T 2ef7_A 2 EEEIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGK-----SLETKAEEFMTA 75 (133)
T ss_dssp CCCBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTC-----CTTCBGGGTSEE
T ss_pred CcccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcCC-----CcccCHHHHcCC
Confidence 56789999999999999999999999999999999999999 899999999999988765321 234678999987
Q ss_pred CCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHHhh
Q 004181 702 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALATR 766 (770)
Q Consensus 702 ~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~~~ 766 (770)
++.++++++++.++++.|.+++.+.+||+|+ +|+++|+||++|+++.+.+..++
T Consensus 76 ------~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-----~g~~~Giit~~dll~~~~~~~~~ 129 (133)
T 2ef7_A 76 ------SLITIREDSPITGALALMRQFNIRHLPVVDD-----KGNLKGIISIRDITRAIDDMFET 129 (133)
T ss_dssp ------CCCCEETTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHHHHHC--
T ss_pred ------CCEEECCCCCHHHHHHHHHHcCCCEEEEECC-----CCeEEEEEEHHHHHHHHHHHHHH
Confidence 7889999999999999999999999999997 78999999999999998776543
No 9
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.73 E-value=1.9e-17 Score=151.82 Aligned_cols=120 Identities=23% Similarity=0.318 Sum_probs=109.2
Q ss_pred cccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhccccccccccccccCC
Q 004181 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSADG 703 (770)
Q Consensus 624 i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~~~ 703 (770)
++|+++|.+++.++++++++.++++.|.+++.+.+||+|++++++|+|+.+|+.+.+.. ...+++++|.+
T Consensus 1 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~--------~~~~v~~~~~~-- 70 (122)
T 3kpb_A 1 TLVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ--------NKKTIEEIMTR-- 70 (122)
T ss_dssp CBHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHT--------TCCBGGGTSBS--
T ss_pred CchHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHh--------cccCHHHHhcC--
Confidence 47899999999999999999999999999999999999999999999999999987642 12368999987
Q ss_pred CCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 704 ETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 704 ~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
++.++++++++.++++.|.+++.+.+||+|+ +|+++|+||++|+++++.+
T Consensus 71 ----~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-----~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 71 ----NVITAHEDEPVDHVAIKMSKYNISGVPVVDD-----YRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp ----SCCCEETTSBHHHHHHHHHHHTCSEEEEECT-----TCBEEEEEEHHHHHHHHC-
T ss_pred ----CCeEECCCCCHHHHHHHHHHhCCCeEEEECC-----CCCEEEEEeHHHHHHHhhc
Confidence 7889999999999999999999999999997 7999999999999998754
No 10
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.72 E-value=5.5e-17 Score=156.54 Aligned_cols=137 Identities=13% Similarity=0.203 Sum_probs=118.1
Q ss_pred hhhhccccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhccccccccc
Q 004181 617 VEELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVS 696 (770)
Q Consensus 617 ~~~~l~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~ 696 (770)
....+..++|+|+|++ ++++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+.+... ....+.+++
T Consensus 10 l~~~l~~~~v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~----~~~~~~~v~ 84 (159)
T 3fv6_A 10 LADKLKKLQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQ----QELTSVPVH 84 (159)
T ss_dssp HHHHHTTCBGGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSC----SCTTTCBGG
T ss_pred HHHHHhhCCHHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhcc----CcccCcCHH
Confidence 4566888999999998 55999999999999999999999999999999999999999999876321 123456789
Q ss_pred cccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCC---eEEEEEeHHHHHHHHHHHHhhh
Q 004181 697 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRG---QLVGLLDRESIILACRALATRK 767 (770)
Q Consensus 697 dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g---~lvGIIT~~DIl~~~~~~~~~~ 767 (770)
++|++ ..++.++++++++.+|+++|.+++.+.+||+|+ +| +++|+||++||++++.+...+.
T Consensus 85 ~~m~~----~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~~~~~vGiit~~dil~~l~~~~~~~ 149 (159)
T 3fv6_A 85 IIMTR----MPNITVCRREDYVMDIAKHLIEKQIDALPVIKD-----TDKGFEVIGRVTKTNMTKILVSLSENE 149 (159)
T ss_dssp GTSEE----TTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEE-----CSSSEEEEEEEEHHHHHHHHHHHHTTC
T ss_pred HHHcC----CCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeC-----CCcceeEEEEEEHHHHHHHHHHHhhcc
Confidence 99974 124678999999999999999999999999997 67 9999999999999998876543
No 11
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.72 E-value=1.6e-17 Score=154.93 Aligned_cols=125 Identities=14% Similarity=0.116 Sum_probs=107.9
Q ss_pred cccccccccc--ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCC-CCcEEEEEehHHHHHHHHHHhhhhcccccccccccc
Q 004181 623 RVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDN-DNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMC 699 (770)
Q Consensus 623 ~i~V~diM~~--~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~-~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim 699 (770)
+++|+|+|++ +++++++++++.++++.|.+++++.+||+|+ +++++|+||.+|+.+..... ......+++++|
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~----~~~~~~~v~~~m 76 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEK----KEFTKEIMLRAA 76 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSS----SCCCHHHHHHHS
T ss_pred CcCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhcc----CccchhhHHHhc
Confidence 3689999974 7899999999999999999999999999975 58999999999999876421 112345688888
Q ss_pred ccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHH
Q 004181 700 SADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRAL 763 (770)
Q Consensus 700 ~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~ 763 (770)
. ++.++++++++.++++.|.+++.+.+||+|+ +|+++|+||++|+++++..+
T Consensus 77 ~-------~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-----~g~lvGiit~~Dil~~l~g~ 128 (130)
T 3hf7_A 77 D-------EIYFVPEGTPLSTQLVKFQRNKKKVGLVVDE-----YGDIQGLVTVEDILEEIVGD 128 (130)
T ss_dssp B-------CCCEEETTCBHHHHHHHHHHHCCCEEEEECT-----TSCEEEEEEHHHHHHHHHC-
T ss_pred c-------CCeEeCCCCcHHHHHHHHHhcCCeEEEEEcC-----CCCEEEEeeHHHHHHHHhCC
Confidence 4 4789999999999999999999999999997 79999999999999987543
No 12
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.72 E-value=1.9e-17 Score=154.00 Aligned_cols=121 Identities=17% Similarity=0.194 Sum_probs=107.0
Q ss_pred cccccccccc--cceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCC-CcEEEEEehHHHHHHHHHHhhhhccccccccccc
Q 004181 622 RRVFVSEVMR--TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEM 698 (770)
Q Consensus 622 ~~i~V~diM~--~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~di 698 (770)
.+++|+|+|+ ++++++++++++.++++.|.+++++.+||+|++ ++++|+||.+|+.+... ..+.+++++
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~--------~~~~~v~~~ 74 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYML--------EPALDIRSL 74 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGT--------CTTSCGGGG
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhc--------cCCcCHHHH
Confidence 4678999999 678999999999999999999999999999986 89999999999987642 134568888
Q ss_pred cccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 699 CSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 699 m~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
|++ +.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++++..
T Consensus 75 m~~-------~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~-----~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 75 VRP-------AVFIPEVKRLNVLLREFRASRNHLAIVIDE-----HGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp CBC-------CCEEETTCBHHHHHHHHHTSSCCEEEEECC------CCEEEEEEHHHHHHHHHH
T ss_pred hCC-------CeEeCCCCcHHHHHHHHHhcCCeEEEEEeC-----CCCEEEEEEHHHHHHHHhC
Confidence 864 779999999999999999999999999997 7999999999999998764
No 13
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.72 E-value=1.9e-17 Score=154.09 Aligned_cols=123 Identities=19% Similarity=0.131 Sum_probs=106.6
Q ss_pred cccccccccccc--ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCC-CcEEEEEehHHHHHHHHHHhhhhcccccccccc
Q 004181 621 KRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSE 697 (770)
Q Consensus 621 l~~i~V~diM~~--~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~d 697 (770)
+++++|+|+|++ +++++++++++.++++.|.+++++.+||+|++ ++++|+||.+|+.+..... ..+.++++
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~------~~~~~v~~ 76 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSG------SGQKQLGA 76 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTT------TTTSBHHH
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcC------CCcCCHHH
Confidence 567899999995 56799999999999999999999999999987 8999999999999876532 13567899
Q ss_pred ccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHH
Q 004181 698 MCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (770)
Q Consensus 698 im~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~ 761 (770)
+|+ ++.++++++++.++++.|.+++.+.+||+|+ +|+++|+||++|+++++.
T Consensus 77 ~m~-------~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-----~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 77 VMR-------PIQVVLNNTALPKVFDQMMTHRLQLALVVDE-----YGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp HSE-------ECCEEETTSCHHHHHHHHHHHTCCEEEEECT-----TSCEEEEEEHHHHHHHHH
T ss_pred Hhc-------CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcC-----CCCEEEEEEHHHHHHHHc
Confidence 995 3789999999999999999999999999997 799999999999998864
No 14
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.72 E-value=1.1e-17 Score=155.20 Aligned_cols=124 Identities=21% Similarity=0.221 Sum_probs=110.8
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhcccccccccccccc
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSA 701 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~ 701 (770)
.+++++++|.++++++++++++.++++.|.+++.+.+||+|+ ++++|+||.+|+.+...+. ...+.+++++|.+
T Consensus 3 ~s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~~-----~~~~~~v~~~m~~ 76 (128)
T 3gby_A 3 ASVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGW-----PTVKEKLGEELLE 76 (128)
T ss_dssp TTCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSSS-----CCTTCBCCGGGCB
T ss_pred cceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhhC-----CcccCcHHHHccC
Confidence 367899999999999999999999999999999999999998 9999999999998764311 1123568999987
Q ss_pred CCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 702 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 702 ~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
++.++++++++.++++.|.+++.+++||+|+ +|+++|+||++|+++++.+
T Consensus 77 ------~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~-----~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 77 ------TVRSYRPGEQLFDNLISVAAAKCSVVPLADE-----DGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp ------CCCCBCTTSBGGGSHHHHHHCSSSEEEEECT-----TCBEEEEEEHHHHHHHHHT
T ss_pred ------CCcEECCCCCHHHHHHHHHhCCCcEEEEECC-----CCCEEEEEEHHHHHHHHHh
Confidence 7889999999999999999999999999997 8999999999999998865
No 15
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.71 E-value=1.1e-17 Score=157.20 Aligned_cols=126 Identities=14% Similarity=0.131 Sum_probs=107.4
Q ss_pred ccccccccc--cceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCC-CcEEEEEehHHHHHHHHHHhhhhcccccccccccc
Q 004181 623 RVFVSEVMR--TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMC 699 (770)
Q Consensus 623 ~i~V~diM~--~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim 699 (770)
+++|+++|+ ++++++++++++.++++.|.+++++.+||+|++ ++++|+||.+|+.+.+.. ....+.+++++|
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~-----~~~~~~~v~~~m 76 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILK-----ADGDSDDVKKLL 76 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGS-----SSGGGCCGGGTC
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHh-----ccCCCcCHHHHc
Confidence 568999999 578999999999999999999999999999987 899999999999876531 112456789999
Q ss_pred ccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHHh
Q 004181 700 SADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALAT 765 (770)
Q Consensus 700 ~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~~ 765 (770)
++ +.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++++.....
T Consensus 77 ~~-------~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-----~g~lvGiit~~Dil~~l~~~~~ 130 (136)
T 3lfr_A 77 RP-------ATFVPESKRLNVLLREFRANHNHMAIVIDE-----YGGVAGLVTIEDVLEQIVGDIE 130 (136)
T ss_dssp BC-------CCEEETTCBHHHHHHHHHHHTCCEEEEECT-----TSCEEEEEEHHHHHTTC-----
T ss_pred CC-------CeEECCCCcHHHHHHHHHhcCCeEEEEEeC-----CCCEEEEEEHHHHHHHHhCCCc
Confidence 64 789999999999999999999999999997 7999999999999998765443
No 16
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.71 E-value=1.2e-17 Score=154.80 Aligned_cols=121 Identities=17% Similarity=0.219 Sum_probs=106.6
Q ss_pred ccccccccccc--eeEEeCCCCHHHHHHHHHhcCCcEEEEeCCC-CcEEEEEehHHHHHHHHHHhhhhcccccccccccc
Q 004181 623 RVFVSEVMRTR--YVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMC 699 (770)
Q Consensus 623 ~i~V~diM~~~--~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim 699 (770)
+++|+|+|+++ ++++++++++.++++.|.+++++.+||+|++ ++++|+||.+|+.+.+.. ...+.+++++|
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~------~~~~~~v~~~m 75 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRS------DAEAFSMDKVL 75 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGST------TCCCCCHHHHC
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhc------cCCCCCHHHHc
Confidence 56899999964 9999999999999999999999999999988 899999999999876531 12456789999
Q ss_pred ccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHH
Q 004181 700 SADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (770)
Q Consensus 700 ~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~ 761 (770)
++ +.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++++.
T Consensus 76 ~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~~~Giit~~dll~~l~ 125 (127)
T 3nqr_A 76 RT-------AVVVPESKRVDRMLKEFRSQRYHMAIVIDE-----FGGVSGLVTIEDILELIV 125 (127)
T ss_dssp BC-------CCEEETTCBHHHHHHHHHHTTCCEEEEECT-----TSCEEEEEEHHHHHHHC-
T ss_pred CC-------CeEECCCCcHHHHHHHHHhcCCeEEEEEeC-----CCCEEEEEEHHHHHHHHh
Confidence 64 679999999999999999999999999997 799999999999998753
No 17
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.71 E-value=4.2e-17 Score=159.67 Aligned_cols=126 Identities=17% Similarity=0.146 Sum_probs=110.1
Q ss_pred hccccccccccc--cceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCC-CcEEEEEehHHHHHHHHHHhhhhccccccccc
Q 004181 620 LKRRVFVSEVMR--TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKKLLVS 696 (770)
Q Consensus 620 ~l~~i~V~diM~--~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~ 696 (770)
.+..++|+|+|+ ++++++++++++.++++.|.+++++.+||+|++ ++++|+||.+|+.+..... .+.+++
T Consensus 38 ~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~-------~~~~v~ 110 (172)
T 3lhh_A 38 RLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAG-------ERLELV 110 (172)
T ss_dssp -----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTT-------CCCCGG
T ss_pred ccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhc-------CcccHH
Confidence 466789999999 688999999999999999999999999999987 9999999999999876421 256789
Q ss_pred cccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHH
Q 004181 697 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALA 764 (770)
Q Consensus 697 dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~ 764 (770)
++| + ++.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++++....
T Consensus 111 ~im-~------~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~-----~g~lvGiit~~Dil~~l~~~~ 166 (172)
T 3lhh_A 111 DLV-K------NCNFVPNSLSGMELLEHFRTTGSQMVFVVDE-----YGDLKGLVTLQDMMDALTGEF 166 (172)
T ss_dssp GGC-B------CCEEEETTCCHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHHHTTC
T ss_pred HHh-c------CCeEeCCCCCHHHHHHHHHHcCCeEEEEEeC-----CCCEEEEeeHHHHHHHHhCCC
Confidence 999 6 6899999999999999999999999999997 799999999999999876543
No 18
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.71 E-value=4.1e-17 Score=156.61 Aligned_cols=134 Identities=17% Similarity=0.180 Sum_probs=114.7
Q ss_pred hhccccccccccc--cceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhccccccccc
Q 004181 619 ELKRRVFVSEVMR--TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVS 696 (770)
Q Consensus 619 ~~l~~i~V~diM~--~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~ 696 (770)
..+...+++|+|+ ++++++++++++.++++.|.+++++.+||+|++|+++|+||.+|+.+.+...........+.+++
T Consensus 10 ~~l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~ 89 (156)
T 3ctu_A 10 ETFLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIV 89 (156)
T ss_dssp HHHHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGG
T ss_pred HHHHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHH
Confidence 3455678999999 68999999999999999999999999999999999999999999998876432222223467799
Q ss_pred cccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHHh
Q 004181 697 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALAT 765 (770)
Q Consensus 697 dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~~ 765 (770)
++|++ ++.++++++++.++++.|.+++ ++||+|+ +|+++|+||++|+++++.+..+
T Consensus 90 ~~m~~------~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~-----~g~~~Giit~~dil~~l~~~~~ 145 (156)
T 3ctu_A 90 HMTKT------DVAVVSPDFTITEVLHKLVDES--FLPVVDA-----EGIFQGIITRKSILKAVNALLH 145 (156)
T ss_dssp GGCBC------SCCCBCSSCCHHHHHHHTTTSS--EEEEECT-----TSBEEEEEETTHHHHHHHHHSC
T ss_pred HhccC------CceeeCCCCcHHHHHHHHHHcC--eEEEEcC-----CCeEEEEEEHHHHHHHHHHHHH
Confidence 99987 7889999999999999999886 7999997 7999999999999999887654
No 19
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.71 E-value=2.6e-17 Score=156.87 Aligned_cols=135 Identities=18% Similarity=0.160 Sum_probs=115.7
Q ss_pred hhhcccccccccccc--ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhh-hhccccccc
Q 004181 618 EELKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQA-KTSRSKKLL 694 (770)
Q Consensus 618 ~~~l~~i~V~diM~~--~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~-~~~~~~~~~ 694 (770)
...+..++|+|+|++ +++++++++++.++++.|.+++++.+||+|++++++|+||.+|+.+.+..... ......+.+
T Consensus 9 ~~~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~ 88 (150)
T 3lqn_A 9 KDEFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEMK 88 (150)
T ss_dssp HHHHHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCB
T ss_pred HHhhhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcCC
Confidence 455788999999994 69999999999999999999999999999999999999999999987632110 011234567
Q ss_pred cccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHHh
Q 004181 695 VSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALAT 765 (770)
Q Consensus 695 V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~~ 765 (770)
++++|++ ++.++++++++.+++++|.+++. +||+|+ +|+++|+||++|+++++.+..+
T Consensus 89 v~~~m~~------~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~-----~g~~~Giit~~dil~~l~~~~~ 146 (150)
T 3lqn_A 89 VEQVMKQ------DIPVLKLEDSFAKALEMTIDHPF--ICAVNE-----DGYFEGILTRRAILKLLNKKVR 146 (150)
T ss_dssp GGGTCBS------SCCEEETTCBHHHHHHHHHHCSE--EEEECT-----TCBEEEEEEHHHHHHHHHHHC-
T ss_pred HHHHhcC------CCceeCCCCCHHHHHHHHHhCCE--EEEECC-----CCcEEEEEEHHHHHHHHHHHhH
Confidence 8999987 78999999999999999999986 999997 7999999999999999887654
No 20
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.71 E-value=8.2e-17 Score=155.56 Aligned_cols=132 Identities=22% Similarity=0.262 Sum_probs=113.7
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhh----hcccccccccc
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAK----TSRSKKLLVSE 697 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~----~~~~~~~~V~d 697 (770)
..++|+|+|.++++++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+.+...... .....+.++.+
T Consensus 3 ~~~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (160)
T 2o16_A 3 LMIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFE 82 (160)
T ss_dssp CCCBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHHH
T ss_pred CcCcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHHH
Confidence 35789999999999999999999999999999999999999899999999999999876531100 11234567899
Q ss_pred ccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHHh
Q 004181 698 MCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALAT 765 (770)
Q Consensus 698 im~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~~ 765 (770)
+|++ ++.++++++++.+|+++|.+++.+.+||+| +|+++|+||++||++.+.+..+
T Consensus 83 im~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd------~g~lvGiit~~dil~~~~~~~~ 138 (160)
T 2o16_A 83 VMHT------DVTSVAPQAGLKESAIYMQKHKIGCLPVVA------KDVLVGIITDSDFVTIAINLLE 138 (160)
T ss_dssp HSCS------CEEEBCTTSBHHHHHHHHHHTTCSCEEEEE------TTEEEEEECHHHHHHHHHHHHH
T ss_pred HhcC------CCeEECCCCCHHHHHHHHHHhCCCEEEEEE------CCEEEEEEEHHHHHHHHHHHhc
Confidence 9987 789999999999999999999999999998 5899999999999999877554
No 21
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.70 E-value=4.8e-17 Score=152.42 Aligned_cols=128 Identities=26% Similarity=0.369 Sum_probs=112.2
Q ss_pred hhccccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHH-HHHHHHHhhhhcccccccccc
Q 004181 619 ELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDI-EEFSKYAQAKTSRSKKLLVSE 697 (770)
Q Consensus 619 ~~l~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL-~~~l~~~~~~~~~~~~~~V~d 697 (770)
+.+.+++|+++|++++.++++++++.++++.|.+++.+.+||+|++++++|+|+.+|+ .+.+.. ....+.++++
T Consensus 3 ~~l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~-----~~~~~~~v~~ 77 (138)
T 2p9m_A 3 DTLKNIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRD-----KYTLETTIGD 77 (138)
T ss_dssp --CTTCBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTT-----CCCSSCBHHH
T ss_pred cccccCCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhh-----cccCCcCHHH
Confidence 3467889999999999999999999999999999999999999989999999999999 776531 1234567899
Q ss_pred ccccCCCCccCCeEeCCCCCHHHHHHHHHhcC-----CCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 698 MCSADGETCCVPCTATPNMNLLSALILMDRYG-----VNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 698 im~~~~~~~~~~~~V~~d~sL~eal~~m~~~~-----~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
+|.+ ++.++++++++.++++.|.+++ .+.+||+|+ +|+++|+||++|+++.+.+
T Consensus 78 ~m~~------~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~-----~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 78 VMTK------DVITIHEDASILEAIKKMDISGKKEEIINQLPVVDK-----NNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp HSCS------SCCCEETTSBHHHHHHHHTCC-----CCCEEEEECT-----TSBEEEEEEHHHHHHHHHH
T ss_pred HhCC------CcEEECCCCCHHHHHHHHHhcCCccccccEEEEECC-----CCeEEEEEEHHHHHHHHHh
Confidence 9987 7889999999999999999999 999999997 7999999999999998765
No 22
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.70 E-value=9.6e-17 Score=151.29 Aligned_cols=123 Identities=18% Similarity=0.175 Sum_probs=109.8
Q ss_pred ccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCC--cEEEEEehHHHHHHHHHHhhhhccccccccccccc
Q 004181 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDN--ILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCS 700 (770)
Q Consensus 623 ~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g--~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~ 700 (770)
.++|+|+|.+++.++++++++.++++.|.+++.+.+||+|+++ +++|+||.+|+.+.+.+.. ..+.+++++|.
T Consensus 4 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~-----~~~~~v~~~m~ 78 (141)
T 2rih_A 4 AIRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRL-----DLDGPAMPIAN 78 (141)
T ss_dssp -CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTC-----CTTSBSGGGCB
T ss_pred ceEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCC-----CCCCCHHHHcC
Confidence 3689999999999999999999999999999999999999888 9999999999998764221 23567899998
Q ss_pred cCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 701 ADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 701 ~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
+ ++.+++++ ++.+++++|.+++.+++||+|+ +|+++|+||++|++++...
T Consensus 79 ~------~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~-----~g~~~Giit~~dll~~~~~ 128 (141)
T 2rih_A 79 S------PITVLDTD-PVHVAAEKMRRHNIRHVVVVNK-----NGELVGVLSIRDLCFERAI 128 (141)
T ss_dssp C------CCEEETTS-BHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHSCHHH
T ss_pred C------CCeEEcCC-CHHHHHHHHHHcCCeEEEEEcC-----CCcEEEEEEHHHHHHHHHH
Confidence 7 78999999 9999999999999999999997 7999999999999887554
No 23
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.70 E-value=4.4e-17 Score=156.13 Aligned_cols=127 Identities=20% Similarity=0.170 Sum_probs=111.7
Q ss_pred hcccccccccccc--ceeEEeCCCCHHHHHHHHHhcCCcEEEEe-CC-CCcEEEEEehHHHHHHHHHHhhhhcccccccc
Q 004181 620 LKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIV-DN-DNILIGLLTLGDIEEFSKYAQAKTSRSKKLLV 695 (770)
Q Consensus 620 ~l~~i~V~diM~~--~~~~v~~~~tl~eal~~m~~~~~~~lpVV-d~-~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V 695 (770)
.+...+|+++|++ +++++++++++.++++.|.+++++.+||+ |+ +++++|+||.+|+.+.+... .+.++
T Consensus 16 ~l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~-------~~~~v 88 (153)
T 3oco_A 16 EMNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARID-------DKAKI 88 (153)
T ss_dssp HHHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHH-------TTSBG
T ss_pred ccCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcC-------CCCcH
Confidence 3567899999997 89999999999999999999999999999 75 48999999999999876532 15678
Q ss_pred ccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHHh
Q 004181 696 SEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALAT 765 (770)
Q Consensus 696 ~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~~ 765 (770)
+++| + ++.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++++.....
T Consensus 89 ~~~m-~------~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~-----~g~~vGivt~~dil~~l~~~~~ 146 (153)
T 3oco_A 89 STIM-R------DIVSVPENMKVPDVMEEMSAHRVPMAIVIDE-----YGGTSGIITDKDVYEELFGNLR 146 (153)
T ss_dssp GGTC-B------CCEEEETTSBHHHHHHHHHHTTCSCEEEECT-----TSCEEEEECHHHHHHHHHC---
T ss_pred HHHh-C------CCeEECCCCCHHHHHHHHHHcCCcEEEEEeC-----CCCEEEEeeHHHHHHHHhccCC
Confidence 9999 6 6899999999999999999999999999997 7999999999999999765443
No 24
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.70 E-value=6.1e-17 Score=151.83 Aligned_cols=128 Identities=20% Similarity=0.253 Sum_probs=112.9
Q ss_pred ccccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHH-HHHHHhhhhcccccccccccc
Q 004181 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEE-FSKYAQAKTSRSKKLLVSEMC 699 (770)
Q Consensus 621 l~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~-~l~~~~~~~~~~~~~~V~dim 699 (770)
+..++|+++|.++++++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+ .+... ...+.+++++|
T Consensus 4 l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~-----~~~~~~v~~~m 78 (138)
T 2yzi_A 4 DMKAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPG-----LPYDIPVERIM 78 (138)
T ss_dssp CTTSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTC-----CCTTSBGGGTC
T ss_pred hhhhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcC-----CcccCCHHHHh
Confidence 5678999999999999999999999999999999999999998999999999999974 33211 13456789999
Q ss_pred ccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHHh
Q 004181 700 SADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALAT 765 (770)
Q Consensus 700 ~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~~ 765 (770)
++ ++.++++++++.++++.|.+++.+++ |+|+ +|+++|+||++|+++.+.+..+
T Consensus 79 ~~------~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~-----~g~~~Giit~~dil~~~~~~~~ 132 (138)
T 2yzi_A 79 TR------NLITANVNTPLGEVLRKMAEHRIKHI-LIEE-----EGKIVGIFTLSDLLEASRRRLE 132 (138)
T ss_dssp BC------SCCEEETTSBHHHHHHHHHHHTCSEE-EEEE-----TTEEEEEEEHHHHHHHHHCCSC
T ss_pred hC------CCeEECCCCcHHHHHHHHHhcCCCEE-EECC-----CCCEEEEEEHHHHHHHHHHHHH
Confidence 87 78999999999999999999999999 9997 7999999999999999876543
No 25
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.70 E-value=2.7e-17 Score=156.36 Aligned_cols=134 Identities=25% Similarity=0.312 Sum_probs=110.5
Q ss_pred ccccccccccc--ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHH---------hhhhccc
Q 004181 622 RRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA---------QAKTSRS 690 (770)
Q Consensus 622 ~~i~V~diM~~--~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~---------~~~~~~~ 690 (770)
+.++|+|+|++ +++++++++++.++++.|.+++++.+||+|++++++|+||.+|+.+..... .......
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 82 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKT 82 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC----
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHh
Confidence 45789999998 899999999999999999999999999999999999999999997543211 0000123
Q ss_pred cccccccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHHhh
Q 004181 691 KKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALATR 766 (770)
Q Consensus 691 ~~~~V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~~~ 766 (770)
.+.++.++|.+ ++.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++.+.+..++
T Consensus 83 ~~~~v~~~m~~------~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~-----~g~~~Giit~~dil~~~~~~~~~ 147 (152)
T 4gqw_A 83 NGKLVGDLMTP------APLVVEEKTNLEDAAKILLETKYRRLPVVDS-----DGKLVGIITRGNVVRAALQIKRS 147 (152)
T ss_dssp -CCBHHHHSEE------SCCCEESSSBHHHHHHHHHHSSCCEEEEECT-----TSBEEEEEEHHHHHHHHHC----
T ss_pred ccccHHHhcCC------CceEECCCCcHHHHHHHHHHCCCCEEEEECC-----CCcEEEEEEHHHHHHHHHhcccc
Confidence 35678999988 7889999999999999999999999999997 79999999999999998765443
No 26
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.70 E-value=8.8e-17 Score=147.81 Aligned_cols=122 Identities=20% Similarity=0.218 Sum_probs=108.4
Q ss_pred cccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhccccccccccccccCC
Q 004181 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSADG 703 (770)
Q Consensus 624 i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~~~ 703 (770)
++|+|+|.+++.++++++++.++++.|.+++.+.+||+| +++++|+|+.+|+.+.+.+.. ...+.+++++|.+
T Consensus 1 m~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~~----~~~~~~v~~~m~~-- 73 (125)
T 1pbj_A 1 MRVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGD----DLAEVKVWEVMER-- 73 (125)
T ss_dssp -CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHTC----CTTTSBHHHHCBC--
T ss_pred CCHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcCC----cccccCHHHHcCC--
Confidence 478999999999999999999999999999999999999 899999999999997765321 2345678999987
Q ss_pred CCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 704 ETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 704 ~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
++.++++++++.++++.|.+++.+.+||+| +|+++|+||++|+++++.+
T Consensus 74 ----~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd------~~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 74 ----DLVTISPRATIKEAAEKMVKNVVWRLLVEE------DDEIIGVISATDILRAKMA 122 (125)
T ss_dssp ----GGGEECTTSCHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHHHHC-
T ss_pred ----CCeEECCCCCHHHHHHHHHhcCCcEEEEEE------CCEEEEEEEHHHHHHHHHh
Confidence 788999999999999999999999999999 5899999999999998754
No 27
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=6.9e-17 Score=156.80 Aligned_cols=132 Identities=20% Similarity=0.177 Sum_probs=116.1
Q ss_pred hhhcccccccccccc---ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhccccccc
Q 004181 618 EELKRRVFVSEVMRT---RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLL 694 (770)
Q Consensus 618 ~~~l~~i~V~diM~~---~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~ 694 (770)
...+..++|+|+|.+ +++++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+.+.... ....+.+
T Consensus 18 ~~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~---~~~~~~~ 94 (165)
T 3fhm_A 18 YFQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQG---AASLQQS 94 (165)
T ss_dssp CCSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHG---GGGGTSB
T ss_pred hHhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcC---CccccCC
Confidence 345778999999996 7999999999999999999999999999999999999999999998876432 1234567
Q ss_pred cccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHH
Q 004181 695 VSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALA 764 (770)
Q Consensus 695 V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~ 764 (770)
++++|.+ ++.++++++++.+++++|.+++.+.+||+| +|+++|+||++||++++.+..
T Consensus 95 v~~~m~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd------~g~~~Giit~~dil~~~~~~~ 152 (165)
T 3fhm_A 95 VSVAMTK------NVVRCQHNSTTDQLMEIMTGGRFRHVPVEE------NGRLAGIISIGDVVKARIGEI 152 (165)
T ss_dssp GGGTSBS------SCCCBCTTCBHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHHHTTCC-
T ss_pred HHHHhcC------CCeEECCCCcHHHHHHHHHHcCCCEEEEEE------CCEEEEEEEHHHHHHHHHHHH
Confidence 8999987 788999999999999999999999999999 589999999999999975543
No 28
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.70 E-value=1.2e-16 Score=161.19 Aligned_cols=128 Identities=15% Similarity=0.141 Sum_probs=113.2
Q ss_pred ccccccccccccceeEEeCCCCHHHHHHHHHhc---CCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhcccccccccc
Q 004181 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAE---KQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSE 697 (770)
Q Consensus 621 l~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~---~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~d 697 (770)
....+|+++|+++++++++++|+.++++.|.++ +.+.+||+|++++++|+||.+|+... ..+.++++
T Consensus 51 ~~~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~----------~~~~~v~~ 120 (205)
T 3kxr_A 51 YSENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKH----------EPHEPLIS 120 (205)
T ss_dssp SCTTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTS----------CTTSBGGG
T ss_pred CCcchHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhC----------CCcchHHH
Confidence 455689999999999999999999999999986 78899999999999999999999642 23567899
Q ss_pred ccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHHhhhhc
Q 004181 698 MCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALATRKSL 769 (770)
Q Consensus 698 im~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~~~~~l 769 (770)
+|++ ++.++++++++.++++.|.+++.+.+||||+ +|+++|+||++|+++.+++..++++.
T Consensus 121 im~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~-----~g~lvGiIT~~Dil~~i~~e~~ed~~ 181 (205)
T 3kxr_A 121 LLSE------DSRALTANTTLLDAAEAIEHSREIELPVIDD-----AGELIGRVTLRAATALVREHYEAQLM 181 (205)
T ss_dssp GCCS------SCCCEETTSCHHHHHHHHHTSSCSEEEEECT-----TSBEEEEEEHHHHHHHHHHHHC----
T ss_pred HhcC------CCeEECCCCCHHHHHHHHHhcCCCEEEEEcC-----CCeEEEEEEHHHHHHHHHHHHHHHHH
Confidence 9987 7899999999999999999999999999997 89999999999999999988877653
No 29
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.69 E-value=1.6e-16 Score=153.29 Aligned_cols=139 Identities=17% Similarity=0.185 Sum_probs=113.4
Q ss_pred ccccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCC--CCcEEEEEehHHHHHHHHHHhhhhccccccccccc
Q 004181 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDN--DNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEM 698 (770)
Q Consensus 621 l~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~--~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~di 698 (770)
...++|+|+|.++++++++++++.++++.|.+++.+.+||+|+ +++++|+||.+|+.+.+...........+..+.++
T Consensus 10 ~~~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~~~ 89 (164)
T 2pfi_A 10 SHHVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQDI 89 (164)
T ss_dssp CCSCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCBHHHH
T ss_pred ccCCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccchhhhh
Confidence 4568899999999999999999999999999999999999996 79999999999999876432211111234567888
Q ss_pred cccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHHh
Q 004181 699 CSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALAT 765 (770)
Q Consensus 699 m~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~~ 765 (770)
|.++......+.++++++++.+++++|.+++.+++||+| +|+++|+||++|+++++.+...
T Consensus 90 m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd------~g~l~Giit~~dil~~~~~~~~ 150 (164)
T 2pfi_A 90 LARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS------RGRAVGCVSWVEMKKAISNLTN 150 (164)
T ss_dssp HHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE------TTEEEEEEEHHHHHHHHHHHHS
T ss_pred hcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE------CCEEEEEEEHHHHHHHHHhhhC
Confidence 876211111168899999999999999999999999999 5899999999999999887654
No 30
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.68 E-value=8.6e-17 Score=153.32 Aligned_cols=119 Identities=20% Similarity=0.271 Sum_probs=107.7
Q ss_pred ccccccccc--ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhcccccccccccccc
Q 004181 624 VFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSA 701 (770)
Q Consensus 624 i~V~diM~~--~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~ 701 (770)
++|+|+|.+ +++++++++++.++++.|.+++++.+||+|++++++|+||.+|+.+.+... ....+.+++++|++
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~----~~~~~~~v~~~m~~ 103 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTG----VDMRDASIADVMTR 103 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSS----SCCTTCBHHHHSEE
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcC----CCcccCcHHHHcCC
Confidence 689999999 999999999999999999999999999999999999999999999876421 12346778999987
Q ss_pred CCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHH
Q 004181 702 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIIL 758 (770)
Q Consensus 702 ~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~ 758 (770)
++.++++++++.++++.|.+++.+.+||+|+ ++++|+||++||++
T Consensus 104 ------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~------~~~~Giit~~dil~ 148 (149)
T 3k2v_A 104 ------GGIRIRPGTLAVDALNLMQSRHITCVLVADG------DHLLGVVHMHDLLR 148 (149)
T ss_dssp ------SCCEECTTCBHHHHHHHHHHHTCSEEEEEET------TEEEEEEEHHHHTC
T ss_pred ------CCeEECCCCCHHHHHHHHHHcCCCEEEEecC------CEEEEEEEHHHhhc
Confidence 7889999999999999999999999999995 49999999999975
No 31
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.68 E-value=3.7e-17 Score=152.30 Aligned_cols=127 Identities=20% Similarity=0.169 Sum_probs=108.3
Q ss_pred hccccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHH-HHHHHhhhhccccccccccc
Q 004181 620 LKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEE-FSKYAQAKTSRSKKLLVSEM 698 (770)
Q Consensus 620 ~l~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~-~l~~~~~~~~~~~~~~V~di 698 (770)
.++.++|+++|.+++.++++++++.++++.|.+++.+.+||+|++++++|+|+.+|+.+ .+... ....+.+++++
T Consensus 4 ~~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~----~~~~~~~v~~~ 79 (133)
T 1y5h_A 4 PFTMTTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAG----LDPNTATAGEL 79 (133)
T ss_dssp ----CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGT----CCTTTSBHHHH
T ss_pred hhhhcCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcC----CCccccCHHHH
Confidence 45667999999999999999999999999999999999999998999999999999984 43211 11245678999
Q ss_pred cccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 699 CSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 699 m~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
|.+ ++.++++++++.++++.|.+++.+.+||+| +|+++|+||++|+++++.+
T Consensus 80 m~~------~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd------~g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 80 ARD------SIYYVDANASIQEMLNVMEEHQVRRVPVIS------EHRLVGIVTEADIARHLPE 131 (133)
T ss_dssp HTT------CCCCEETTCCHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHHTCC-
T ss_pred hcC------CCEEECCCCCHHHHHHHHHHcCCCEEEEEE------CCEEEEEEEHHHHHHHHHh
Confidence 987 788999999999999999999999999999 5899999999999987643
No 32
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.68 E-value=3.2e-16 Score=162.58 Aligned_cols=134 Identities=19% Similarity=0.220 Sum_probs=107.9
Q ss_pred hccccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCC--CcEEEEEehHHHHHHHHHHhhhhcc--------
Q 004181 620 LKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND--NILIGLLTLGDIEEFSKYAQAKTSR-------- 689 (770)
Q Consensus 620 ~l~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~--g~lvGiVt~~dL~~~l~~~~~~~~~-------- 689 (770)
...+++|+|+|+++++++.+++++.++.++|.+++++.+||||++ ++++|+|+++||.+.+.........
T Consensus 9 ~~~~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~ 88 (250)
T 2d4z_A 9 NKYNIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEA 88 (250)
T ss_dssp CCSSCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCB
T ss_pred ccCCCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence 456789999999999999999999999999999999999999974 6899999999999876532100000
Q ss_pred ----------------------c---------------------------------------------------------
Q 004181 690 ----------------------S--------------------------------------------------------- 690 (770)
Q Consensus 690 ----------------------~--------------------------------------------------------- 690 (770)
.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (250)
T 2d4z_A 89 DEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFE 168 (250)
T ss_dssp CCC---------------------------------------------------------------------------CC
T ss_pred cccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccc
Confidence 0
Q ss_pred ---------------ccccc--c-cccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEe
Q 004181 691 ---------------KKLLV--S-EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLD 752 (770)
Q Consensus 691 ---------------~~~~V--~-dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT 752 (770)
.+..+ + .+|+ ..|+++.+++++.+++++|.+.+++++||++ +|+++||||
T Consensus 169 ~~i~~~~~~~~~~~~l~~~Vdl~~~~md------~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~------~GrLVGIVT 236 (250)
T 2d4z_A 169 EMLTLEEIYRWEQREKNVVVNFETCRID------QSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS------MGKLVGVVA 236 (250)
T ss_dssp SCCBHHHHHHHHHHHTTCBCCTTSSCEE------CCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE------TTEEEEEEE
T ss_pred cccChhhhhhHHHHhcCceecccccccc------CCCeEECCCCcHHHHHHHHHHhCCeEEEEEE------CCEEEEEEE
Confidence 00111 1 1344 4899999999999999999999999999998 699999999
Q ss_pred HHHHHHHHHHHHh
Q 004181 753 RESIILACRALAT 765 (770)
Q Consensus 753 ~~DIl~~~~~~~~ 765 (770)
++||++++....+
T Consensus 237 rkDl~kai~~~~~ 249 (250)
T 2d4z_A 237 LAEIQAAIEGSYQ 249 (250)
T ss_dssp HHHHHHHHHC---
T ss_pred HHHHHHHHHHHhc
Confidence 9999999876543
No 33
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.68 E-value=8.1e-17 Score=157.90 Aligned_cols=132 Identities=21% Similarity=0.311 Sum_probs=112.0
Q ss_pred cccccccccc--ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHh----------------
Q 004181 623 RVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQ---------------- 684 (770)
Q Consensus 623 ~i~V~diM~~--~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~---------------- 684 (770)
.++|+|+|++ +++++++++++.++++.|.+++++.+||+|++++++|+||.+|+.+......
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 82 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTW 82 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CC
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchh
Confidence 4689999999 8999999999999999999999999999999999999999999985321000
Q ss_pred -------hhhccccccccccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHH
Q 004181 685 -------AKTSRSKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESII 757 (770)
Q Consensus 685 -------~~~~~~~~~~V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl 757 (770)
.......+.+++++|++ ++.++++++++.+++++|.+++.+++||+|+ +|+++|+||++|++
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~m~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~~vGiit~~dil 151 (180)
T 3sl7_A 83 KTFNELQKLISKTYGKVVGDLMTP------SPLVVRDSTNLEDAARLLLETKFRRLPVVDA-----DGKLIGILTRGNVV 151 (180)
T ss_dssp CSHHHHHHHHHTTTTCBHHHHSEE------SCCCEETTSBHHHHHHHHTTSTTCEEEEECT-----TCBEEEEEEHHHHH
T ss_pred hhhHHHHHHHhccccccHHHHhCC------CceEeCCCCcHHHHHHHHHHcCCCEEEEECC-----CCeEEEEEEHHHHH
Confidence 00012345678999988 7889999999999999999999999999997 79999999999999
Q ss_pred HHHHHHHh
Q 004181 758 LACRALAT 765 (770)
Q Consensus 758 ~~~~~~~~ 765 (770)
+++.+..+
T Consensus 152 ~~~~~~~~ 159 (180)
T 3sl7_A 152 RAALQIKR 159 (180)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 99876543
No 34
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.67 E-value=1.1e-16 Score=154.17 Aligned_cols=134 Identities=14% Similarity=0.088 Sum_probs=113.4
Q ss_pred hcccccccccccc--ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhh-hhccccccccc
Q 004181 620 LKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQA-KTSRSKKLLVS 696 (770)
Q Consensus 620 ~l~~i~V~diM~~--~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~-~~~~~~~~~V~ 696 (770)
.+..++|+++|.+ +++++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+.+..... ......+.+++
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~ 89 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVE 89 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHH
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCHH
Confidence 3567899999998 99999999999999999999999999999999999999999999987632110 01113456789
Q ss_pred cccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHHhh
Q 004181 697 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALATR 766 (770)
Q Consensus 697 dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~~~ 766 (770)
++|.+ ++.++++++++.+++++|.+++. +||+|+ +|+++|+||++|+++++.+...+
T Consensus 90 ~~m~~------~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~-----~g~~vGiit~~dil~~~~~~~~~ 146 (159)
T 1yav_A 90 EVMLT------DIPRLHINDPIMKGFGMVINNGF--VCVEND-----EQVFEGIFTRRVVLKELNKHIRS 146 (159)
T ss_dssp HHSBC------SCCEEETTSBHHHHHHHTTTCSE--EEEECT-----TCBEEEEEEHHHHHHHHHHHC--
T ss_pred HhcCC------CCceEcCCCCHHHHHHHHHhCCE--EEEEeC-----CCeEEEEEEHHHHHHHHHHHHHh
Confidence 99987 78899999999999999999876 999997 79999999999999998776543
No 35
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.67 E-value=3.4e-16 Score=154.26 Aligned_cols=137 Identities=19% Similarity=0.285 Sum_probs=114.8
Q ss_pred hhhccccccccccccc----eeEE--eCCCCHHHHHHHHHhcCCcEEEEe--CCCCcEEEEEehHHHHHHHHHHhhhh--
Q 004181 618 EELKRRVFVSEVMRTR----YVTV--LMTTLLIEALTLMLAEKQSCAMIV--DNDNILIGLLTLGDIEEFSKYAQAKT-- 687 (770)
Q Consensus 618 ~~~l~~i~V~diM~~~----~~~v--~~~~tl~eal~~m~~~~~~~lpVV--d~~g~lvGiVt~~dL~~~l~~~~~~~-- 687 (770)
++.++..+|+|+|+++ ++++ ++++++.+|++.|.+++++.+||+ |++++++|+||.+|+.+.+.......
T Consensus 5 ~~~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~ 84 (185)
T 2j9l_A 5 EEFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDG 84 (185)
T ss_dssp ----CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSC
T ss_pred hhhhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCC
Confidence 3567789999999987 7888 999999999999999999999999 78899999999999998875432100
Q ss_pred ------------------ccccccccccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEE
Q 004181 688 ------------------SRSKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVG 749 (770)
Q Consensus 688 ------------------~~~~~~~V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvG 749 (770)
....+.++.++|++ ++.++++++++.+|+++|.+++.+.+||+| +|+++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~------~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd------~g~~vG 152 (185)
T 2j9l_A 85 VVSTSIIYFTEHSPPLPPYTPPTLKLRNILDL------SPFTVTDLTPMEIVVDIFRKLGLRQCLVTH------NGRLLG 152 (185)
T ss_dssp CCTTCEEECSSSCCCCCTTCCCCEECGGGEES------SCCEEETTSBHHHHHHHHHHHTCSEEEEEE------TTEEEE
T ss_pred ccccceeecccCCcccccccccCccHHHhhCc------CCeEeCCCCCHHHHHHHHHhCCCcEEEEEE------CCEEEE
Confidence 01345678899987 789999999999999999999999999998 689999
Q ss_pred EEeHHHHHHHHHHHHhh
Q 004181 750 LLDRESIILACRALATR 766 (770)
Q Consensus 750 IIT~~DIl~~~~~~~~~ 766 (770)
+||++|+++++.+..++
T Consensus 153 iit~~dll~~l~~~~~~ 169 (185)
T 2j9l_A 153 IITKKDVLKHIAQMANQ 169 (185)
T ss_dssp EEEHHHHHHHHHHHCC-
T ss_pred EEEHHHHHHHHHHhhcc
Confidence 99999999998876544
No 36
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.67 E-value=3.8e-16 Score=145.90 Aligned_cols=123 Identities=20% Similarity=0.273 Sum_probs=108.2
Q ss_pred ccccccc---cceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhcccccccccccccc
Q 004181 625 FVSEVMR---TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSA 701 (770)
Q Consensus 625 ~V~diM~---~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~ 701 (770)
+|+|+|+ ++++++++++++.++++.|.+++.+.+||+| +++++|+||.+|+.+..... .....+.+++++|.+
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~---~~~~~~~~v~~~m~~ 82 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLL---DKPVKDTQVKEIMTR 82 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGS---SSCGGGSBGGGTSBC
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHc---CCCcccCCHHHhccC
Confidence 8999999 8999999999999999999999999999998 89999999999998643211 112346679999987
Q ss_pred CCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHH
Q 004181 702 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRAL 763 (770)
Q Consensus 702 ~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~ 763 (770)
++.++++++++.++++.|.+++.+.+||+| +|+++|+||++|+++++.+.
T Consensus 83 ------~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd------~g~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 83 ------QVAYVDLNNTNEDCMALITEMRVRHLPVLD------DGKVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp ------SCCCBCTTCBHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHHHHHC-
T ss_pred ------CCeEECCCCcHHHHHHHHHHhCCCEEEEEe------CCEEEEEEEHHHHHHHHHhc
Confidence 788999999999999999999999999999 58999999999999987654
No 37
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.66 E-value=2.1e-16 Score=151.59 Aligned_cols=132 Identities=16% Similarity=0.127 Sum_probs=111.4
Q ss_pred hcccccccccccc--ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhh-hhccccccccc
Q 004181 620 LKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQA-KTSRSKKLLVS 696 (770)
Q Consensus 620 ~l~~i~V~diM~~--~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~-~~~~~~~~~V~ 696 (770)
.+..++|+++|.+ +++++++++++.++++.|.+++++.+||+|++++++|+||.+|+.+.+..... ......+.+++
T Consensus 7 ~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~ 86 (157)
T 2emq_A 7 EFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERLETMKVE 86 (157)
T ss_dssp ---CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSBCGGGGGTCBGG
T ss_pred hHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccccchHHhcCCcHH
Confidence 4677899999997 89999999999999999999999999999999999999999999876532100 00123456789
Q ss_pred cccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHH
Q 004181 697 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALA 764 (770)
Q Consensus 697 dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~ 764 (770)
++|.+ ++.++++++++.++++.|.+++. +||+|+ +|+++|+||++|+++.+.+..
T Consensus 87 ~~m~~------~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~-----~g~~~Giit~~dil~~~~~~~ 141 (157)
T 2emq_A 87 EVMNR------NIPRLRLDDSLMKAVGLIVNHPF--VCVEND-----DGYFAGIFTRREVLKQLNKQL 141 (157)
T ss_dssp GTCBC------CCCEEETTSBHHHHHHHHHHSSE--EEEECS-----SSSEEEEEEHHHHHHHHHHTT
T ss_pred HHhCC------CCceecCCCcHHHHHHHHhhCCE--EEEEcC-----CCeEEEEEEHHHHHHHHHHHh
Confidence 99987 78999999999999999999987 999997 799999999999999987654
No 38
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.66 E-value=3.4e-16 Score=150.53 Aligned_cols=133 Identities=21% Similarity=0.255 Sum_probs=113.0
Q ss_pred hhhccccccccccccceeEEeCCCCHHHHHHHHHhcCCcE-EEEeCCCCcEEEEEehHHHHHHHHHH------hh-----
Q 004181 618 EELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSC-AMIVDNDNILIGLLTLGDIEEFSKYA------QA----- 685 (770)
Q Consensus 618 ~~~l~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~-lpVVd~~g~lvGiVt~~dL~~~l~~~------~~----- 685 (770)
.+....++|+++|+++++++++++++.+|++.|.+++.+. +||+|++ +++|+||.+|+.+.+... ..
T Consensus 10 ~~~~~~~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~ 88 (157)
T 1o50_A 10 HHHMKVKDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSGFHFFGFIPKEELIRS 88 (157)
T ss_dssp CTTCBHHHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHHHHHHCCCC-------
T ss_pred hhhhccccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHhhhHHhhhccHHHHHH
Confidence 3456678999999999999999999999999999999999 9999987 999999999999875421 00
Q ss_pred hhccccccccccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHH
Q 004181 686 KTSRSKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRAL 763 (770)
Q Consensus 686 ~~~~~~~~~V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~ 763 (770)
......+.+++++|++ +.++++++++.+|+++|.+++.+.+||+|+ +|+++|+||++|+++.+.+.
T Consensus 89 ~~~~~~~~~v~~im~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~~vGiit~~dll~~l~~~ 154 (157)
T 1o50_A 89 SMKRLIAKNASEIMLD-------PVYVHMDTPLEEALKLMIDNNIQEMPVVDE-----KGEIVGDLNSLEILLALWKG 154 (157)
T ss_dssp CCCCCSSCBHHHHCBC-------CCCBCTTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHHHHS
T ss_pred HHHHHcCCcHHHHcCC-------CeEECCCCCHHHHHHHHHHCCCcEEEEEcC-----CCEEEEEEEHHHHHHHHHHh
Confidence 0012345678888864 678999999999999999999999999997 78999999999999998764
No 39
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.66 E-value=1.3e-16 Score=153.48 Aligned_cols=119 Identities=16% Similarity=0.166 Sum_probs=106.4
Q ss_pred hcccccccccccc--ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCC-cEEEEEehHHHHHHHHHHhhhhccccccccc
Q 004181 620 LKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDN-ILIGLLTLGDIEEFSKYAQAKTSRSKKLLVS 696 (770)
Q Consensus 620 ~l~~i~V~diM~~--~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g-~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~ 696 (770)
.+.+.+|+|+|++ +++++++++++.++++.|.+++++.+||+|+++ +++|+||.+|+.+..... .+.+++
T Consensus 34 ~l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~-------~~~~v~ 106 (156)
T 3oi8_A 34 DFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP-------EQFHLK 106 (156)
T ss_dssp HHTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG-------GGCCHH
T ss_pred ccCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC-------CcccHH
Confidence 4667899999997 799999999999999999999999999999874 999999999998764311 356789
Q ss_pred cccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHH
Q 004181 697 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESII 757 (770)
Q Consensus 697 dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl 757 (770)
++|++ +.++++++++.++++.|.+++.+.+||+|+ +|+++|+||++|++
T Consensus 107 ~im~~-------~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-----~g~~~Givt~~Dil 155 (156)
T 3oi8_A 107 SILRP-------AVFVPEGKSLTALLKEFREQRNHMAIVIDE-----YGGTSGLVTFEDII 155 (156)
T ss_dssp HHCBC-------CCEEETTSBHHHHHHHHHHTTCCEEEEECT-----TSSEEEEEEHHHHC
T ss_pred HHcCC-------CEEECCCCCHHHHHHHHHhcCCeEEEEECC-----CCCEEEEEEHHHhc
Confidence 99964 789999999999999999999999999997 79999999999986
No 40
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.65 E-value=5.1e-16 Score=152.33 Aligned_cols=124 Identities=13% Similarity=0.056 Sum_probs=108.7
Q ss_pred hcccccccccccc--ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCC-CcEEEEEehHHHHHHHHHHhhhhccccccccc
Q 004181 620 LKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKKLLVS 696 (770)
Q Consensus 620 ~l~~i~V~diM~~--~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~ 696 (770)
.+..++|+++|++ +++++++++++.++++.|.+++++.+||+|++ ++++|+||.+|+.+..... .+.+++
T Consensus 32 ~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~-------~~~~v~ 104 (173)
T 3ocm_A 32 TLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITE-------GRVRRN 104 (173)
T ss_dssp HHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHH-------SSCCGG
T ss_pred ccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcC-------CcchhH
Confidence 4677899999974 78999999999999999999999999999987 8999999999999876532 134466
Q ss_pred cccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHH
Q 004181 697 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRAL 763 (770)
Q Consensus 697 dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~ 763 (770)
+| + ++.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++||++++...
T Consensus 105 -~~-~------~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde-----~g~lvGiIT~~Dil~~l~~~ 158 (173)
T 3ocm_A 105 -RL-R------DPIIVHESIGILRLMDTLKRSRGQLVLVADE-----FGAIEGLVTPIDVFEAIAGE 158 (173)
T ss_dssp -GS-B------CCCEECGGGCHHHHHHHHHHSTTCCEEEECT-----TCCEEEEECHHHHHHHHHCC
T ss_pred -hc-C------CCeEECCCCcHHHHHHHHHHcCCeEEEEEeC-----CCCEEEEEeHHHHHHHHhCc
Confidence 44 4 5789999999999999999999999999997 79999999999999987643
No 41
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.65 E-value=7.5e-16 Score=147.27 Aligned_cols=137 Identities=13% Similarity=0.093 Sum_probs=113.3
Q ss_pred hhhhhccccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhcccccccc
Q 004181 616 EVEELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLV 695 (770)
Q Consensus 616 ~~~~~l~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V 695 (770)
...+.+++++|+++ +++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+...... ....+.++
T Consensus 15 ~~~~~l~~~~v~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~---~~~~~~~v 89 (152)
T 2uv4_A 15 FMSKSLEELQIGTY--ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKT---YNNLDVSV 89 (152)
T ss_dssp HHTSBHHHHTCSBC--SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSS---CCCTTSBG
T ss_pred HHHhhHHHccCCcc--CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchh---hhhhcchH
Confidence 34556778899998 88999999999999999999999999999999999999999999998764211 01234568
Q ss_pred ccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 696 SEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 696 ~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
.++|..+..+.+++.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++++.+
T Consensus 90 ~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~~vGiit~~dil~~l~~ 151 (152)
T 2uv4_A 90 TKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDE-----NDVVKGIVSLSDILQALVL 151 (152)
T ss_dssp GGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECT-----TSBEEEEEEHHHHHHHHC-
T ss_pred HHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECC-----CCeEEEEEEHHHHHHHHHh
Confidence 8888621111126889999999999999999999999999997 7999999999999998643
No 42
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.65 E-value=6.6e-16 Score=152.75 Aligned_cols=125 Identities=14% Similarity=0.208 Sum_probs=111.4
Q ss_pred cccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhccccccccccccccCC
Q 004181 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSADG 703 (770)
Q Consensus 624 i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~~~ 703 (770)
++|+++|+++++++++++++.++++.|.+++++.+||+|++++++|+||.+|+.+.+... .....+.+++++|.+
T Consensus 9 ~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~---~~~~~~~~v~~im~~-- 83 (184)
T 1pvm_A 9 MRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPR---NKKPDEVPIRLVMRK-- 83 (184)
T ss_dssp CBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGG---CCCGGGSBGGGTSBS--
T ss_pred cCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhc---ccCcccCCHHHHhCC--
Confidence 789999999999999999999999999999999999999889999999999998765321 112345678999987
Q ss_pred CCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 704 ETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 704 ~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
++.++++++++.+|+++|.+++.+.+||+|+ +|+++|+||++|+++++.+
T Consensus 84 ----~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 84 ----PIPKVKSDYDVKDVAAYLSENGLERCAVVDD-----PGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp ----SCCEEETTCBHHHHHHHHHHHTCSEEEEECT-----TCCEEEEEEHHHHTTTSCH
T ss_pred ----CCcEECCCCCHHHHHHHHHHcCCcEEEEEcC-----CCeEEEEEEHHHHHHHHHh
Confidence 7889999999999999999999999999996 7999999999999987654
No 43
>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
Probab=99.63 E-value=3.3e-15 Score=168.65 Aligned_cols=193 Identities=16% Similarity=0.169 Sum_probs=148.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC---Cchh----HHHHHHHHHHHHHHH-HhcccccCCHHHHH
Q 004181 348 GELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNG---IPKA----VFPVMGGLAVGLIAL-MFPEILYWGFENVD 419 (770)
Q Consensus 348 ~~l~~~illGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~~---~~~~----~~~~l~gl~vg~i~~-~~P~~~g~G~~~i~ 419 (770)
..+...+++|+++|+++.+|..+.+++.+++........ .+.+ +.+++++++++.+.. +.|+..|+|.+.+.
T Consensus 34 ~~~~~~~liGv~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~~~p~a~GsGip~v~ 113 (465)
T 1ots_A 34 AILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIE 113 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGSSCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhCccccCCChHHHH
Confidence 345677899999999999999999988877665533221 1112 234555666666554 67999999999999
Q ss_pred HHHccCCCccCccHHHHHHHHHHHHHHHHHhhhcCCccceechHHHHHHHHhHHHHHHHHHhhhcCCCccccccccccch
Q 004181 420 ILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIAQSNPTIHFSILEVASP 499 (770)
Q Consensus 420 ~l~~~~~~~~~~~~~~l~~~~~~K~~~t~lt~gsG~~gG~f~P~l~iGa~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~p 499 (770)
..+++.. +... ....+.|++.+.+|+++|.|.|.++|+.++||++|..+++.++. . +..+.
T Consensus 114 ~~l~~~~---~~~~---~r~~~~k~~~~~lti~sG~s~GrEGP~vqiGa~ig~~l~~~~~l---~----------~~~~~ 174 (465)
T 1ots_A 114 GALEDQR---PVRW---WRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRL---K----------GDEAR 174 (465)
T ss_dssp HHHTTCS---CCCH---HHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHHHHTTC---C----------SHHHH
T ss_pred HHHhCCC---CCCc---HHHHHHHHHHHHHHHhcCCCcCCcchHHHHHHHHHHHHHHHhcc---C----------CHHHH
Confidence 8887641 1221 44577899999999999999999999999999999999997652 0 22456
Q ss_pred HHHHHHHHHHHHHHHcCchHHHHHHHHHHh-CCcc--h--HHHHHHHHHHHHHHhhhccccccch
Q 004181 500 QAYGLVGMAATLAGVCQVPLTSVLLLFELT-QDYR--I--VLPLLGAVGLSSWFTSGQMRRRDVK 559 (770)
Q Consensus 500 ~~~alvGaaA~la~~~~aPls~~vi~~Elt-g~~~--~--~lPlm~a~~ia~~v~~~~~~~~~~~ 559 (770)
..+..+|+||.+++++++|++++++.+|.. ++++ . +.|.++++++++++++.+...++.|
T Consensus 175 r~li~~GaaAGlaAaF~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~~G~~~~f 239 (465)
T 1ots_A 175 HTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFNHEVALI 239 (465)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHTTTTSCSSSCCCCCHHHHHHHHHHHHHHHHHHSCSCCSS
T ss_pred HHHHHHHHHHHHHHHHCCchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCCcee
Confidence 789999999999999999999999999964 5444 5 8999999999998887654444433
No 44
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.63 E-value=2.2e-15 Score=141.91 Aligned_cols=132 Identities=20% Similarity=0.225 Sum_probs=107.6
Q ss_pred cccccc---ccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhcccccccccccc
Q 004181 623 RVFVSE---VMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMC 699 (770)
Q Consensus 623 ~i~V~d---iM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim 699 (770)
+.++++ +|.++++++++++++.++++.|.+++.+.+||+|++++++|+|+.+|+.+.+.... ....+.++.++|
T Consensus 7 ~~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~---~~~~~~~v~~~m 83 (144)
T 2nyc_A 7 KIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGI---YNDLSLSVGEAL 83 (144)
T ss_dssp GSBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC-------CCSBHHHHH
T ss_pred hcchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcccc---cccCCccHHHHH
Confidence 446677 88899999999999999999999999999999998999999999999998764211 112356788888
Q ss_pred ccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 700 SADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 700 ~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
.+.+...+++.++++++++.++++.|.+++.+.+||+|+ +|+++|+||++|+++++.+
T Consensus 84 ~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-----~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 84 MRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD-----VGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp HHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECT-----TSBEEEEEEHHHHHHHHHH
T ss_pred hcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECC-----CCCEEEEEEHHHHHHHHHh
Confidence 641100014679999999999999999999999999997 7999999999999998754
No 45
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.62 E-value=1.4e-15 Score=145.94 Aligned_cols=125 Identities=21% Similarity=0.302 Sum_probs=109.4
Q ss_pred cccccccc------cceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhcccccccccc
Q 004181 624 VFVSEVMR------TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSE 697 (770)
Q Consensus 624 i~V~diM~------~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~d 697 (770)
.+|+|+|+ +++.++++++++.+|++.|.+++++.+||+| +++++|+||.+|+.+.+.... ....+.++++
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~---~~~~~~~v~~ 82 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQE---RSSKATRVEE 82 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGGGT---CCSSSCBHHH
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHhcc---CCccccCHHH
Confidence 47999999 5569999999999999999999999999965 899999999999998764221 1234677899
Q ss_pred ccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHH
Q 004181 698 MCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALA 764 (770)
Q Consensus 698 im~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~ 764 (770)
+|++ ++.++++++++.+++++|.+++.+++||+| +|+++|+||++|+++++.+..
T Consensus 83 ~m~~------~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd------~g~~~Giit~~dil~~l~~~~ 137 (157)
T 4fry_A 83 IMTA------KVRYVEPSQSTDECMALMTEHRMRHLPVLD------GGKLIGLISIGDLVKSVIADQ 137 (157)
T ss_dssp HSBS------SCCCBCTTSBHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHHHHHTTC
T ss_pred HcCC------CCcEECCCCcHHHHHHHHHHcCCCEEEEEE------CCEEEEEEEHHHHHHHHHHHH
Confidence 9987 788999999999999999999999999998 589999999999999987644
No 46
>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A
Probab=99.62 E-value=6.7e-15 Score=165.73 Aligned_cols=191 Identities=18% Similarity=0.225 Sum_probs=143.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc---CCchhHHHH-HHHH---HHHHHH-HHhcccccCCHHHHHH
Q 004181 349 ELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDN---GIPKAVFPV-MGGL---AVGLIA-LMFPEILYWGFENVDI 420 (770)
Q Consensus 349 ~l~~~illGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~---~~~~~~~~~-l~gl---~vg~i~-~~~P~~~g~G~~~i~~ 420 (770)
.+...+++|+++|+++.+|..+..++.+++....... +++.|+.++ ++++ +.+.+. .+.|+..|+|.+.++.
T Consensus 31 l~l~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~l~~~~~p~a~GsGIp~v~~ 110 (466)
T 3nd0_A 31 TLVAAIVVGLITGVLGAGFKSAVNNMLQWRSQLAQILAPIPPLAWLVTALISGGMVALSFWLMKRFAPDTSGSGIPQIEG 110 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCTHHHHHHHHHHHHHHHHHHHHHTTTCGGGSBCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHCCCcCCCCHHHHHH
Confidence 4567789999999999999999998887766553322 222233333 2222 222222 3469999999999988
Q ss_pred HHccCCCccCccHHHHHHHHHHHHHHHHHhhhcCCccceechHHHHHHHHhHHHHHHHHHhhhcCCCccccccccccchH
Q 004181 421 LLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIAQSNPTIHFSILEVASPQ 500 (770)
Q Consensus 421 l~~~~~~~~~~~~~~l~~~~~~K~~~t~lt~gsG~~gG~f~P~l~iGa~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~p~ 500 (770)
.+++.. +... ......|++.+.+|+++|.|.|.++|+.++||++|..+++.++. +..+..
T Consensus 111 ~l~g~~---~~~~---~~~~~~k~~~~~ltig~G~S~GrEGP~vqiGa~ig~~l~~~~~~--------------~~~~~r 170 (466)
T 3nd0_A 111 HLEGKL---PLVW---QRVLPIKLVGGFLSLGAGMLAGFEGPTIQMGGSIGQMTGGWFKA--------------TQENQR 170 (466)
T ss_dssp HTTSSS---CCCH---HHHHHHHHHHHHHHHHTTCSCCTHHHHHHHHHHHHHHHHHHTTC--------------CHHHHH
T ss_pred HHcCCC---CCch---HHHHHHHHHHHHHHHhcCCCCCCcchHHHHHHHHHHHHHHHcCC--------------ChhHHH
Confidence 887541 1221 34567899999999999999999999999999999999998753 224567
Q ss_pred HHHHHHHHHHHHHHcCchHHHHHHHHHH-hCCcc----hHHHHHHHHHHHHHHhhhccccccch
Q 004181 501 AYGLVGMAATLAGVCQVPLTSVLLLFEL-TQDYR----IVLPLLGAVGLSSWFTSGQMRRRDVK 559 (770)
Q Consensus 501 ~~alvGaaA~la~~~~aPls~~vi~~El-tg~~~----~~lPlm~a~~ia~~v~~~~~~~~~~~ 559 (770)
.+..+|+||.+++++++|++++++.+|. .++++ .+.|.++++++++++++.+..+++.|
T Consensus 171 ~ll~aGaAAGlaAaF~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~~g~~~~f 234 (466)
T 3nd0_A 171 ILIAVGAGAGLATAFNAPLAGVALIGEEMHPRFRSQTLAYHSLLFGCVMATIILRMIRGQSAII 234 (466)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHSSSCCCCSSCCTTHHHHHHHHHHHHHHHHHHTCSSCSS
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHHcCCCCce
Confidence 8999999999999999999999999996 45552 36799999999999887665554444
No 47
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.62 E-value=2.2e-15 Score=160.02 Aligned_cols=137 Identities=16% Similarity=0.156 Sum_probs=119.1
Q ss_pred ccccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhh--hccccccccccc
Q 004181 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAK--TSRSKKLLVSEM 698 (770)
Q Consensus 621 l~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~--~~~~~~~~V~di 698 (770)
....+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+...... .....+.+++++
T Consensus 153 ~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~ 232 (296)
T 3ddj_A 153 DEIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVVKDV 232 (296)
T ss_dssp CCCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBHHHH
T ss_pred cccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHHhhcChhhhcCcCHHHH
Confidence 345689999999999999999999999999999999999999999999999999999887532111 011245678999
Q ss_pred cccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHHhhhh
Q 004181 699 CSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALATRKS 768 (770)
Q Consensus 699 m~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~~~~~ 768 (770)
|++ ++.++++++++.+|+++|.+++.+++||+|+ +|+++|+||++||++++.+...++.
T Consensus 233 m~~------~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~-----~g~~~Giit~~Dil~~l~~~~~~~~ 291 (296)
T 3ddj_A 233 MVT------NLVTIDELASVNRAAAEMIVKRIGSLLILNK-----DNTIRGIITERDLLIALHHILVMEK 291 (296)
T ss_dssp SBC------CCCBCCTTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHHHHHHHHHH
T ss_pred hCC------CCeEECCCCcHHHHHHHHHHcCCCEEEEECC-----CCeEEEEEcHHHHHHHHHHHhcchh
Confidence 987 7899999999999999999999999999997 7999999999999999987766543
No 48
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.61 E-value=1.3e-15 Score=157.80 Aligned_cols=129 Identities=16% Similarity=0.176 Sum_probs=104.1
Q ss_pred ccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhh---------------
Q 004181 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKT--------------- 687 (770)
Q Consensus 623 ~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~--------------- 687 (770)
..+|+|+|+++++++++++++.+|++.|.+++++.+||+|++|+++|+||.+|+.+.+.......
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v~~~ 85 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNILDT 85 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHHHHH
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999998764210000
Q ss_pred --------------------------------------------------------------------------------
Q 004181 688 -------------------------------------------------------------------------------- 687 (770)
Q Consensus 688 -------------------------------------------------------------------------------- 687 (770)
T Consensus 86 l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~~~~ 165 (245)
T 3l2b_A 86 LSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAKKNNI 165 (245)
T ss_dssp TTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHHHTC
T ss_pred hCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHcCC
Confidence
Q ss_pred --------------ccccccccccccc-cCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEe
Q 004181 688 --------------SRSKKLLVSEMCS-ADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLD 752 (770)
Q Consensus 688 --------------~~~~~~~V~dim~-~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT 752 (770)
......+++++|+ + ++.++++++++.+++++|.+++++.+||+|+ +|+++|+||
T Consensus 166 ~~i~t~~d~~~~~~~~~~~~~v~~im~~~------~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~-----~~~~~Giit 234 (245)
T 3l2b_A 166 TVITTPHDSFTASRLIVQSLPVDYVMTKD------NLVAVSTDDLVEDVKVTMSETRYSNYPVIDE-----NNKVVGSIA 234 (245)
T ss_dssp EEEECSSCHHHHHHHGGGGSBHHHHSBCT------TCCCEETTSBHHHHHHHHHHHCCSEEEEECT-----TCBEEEEEE
T ss_pred eEEEeCCChHHHHHHHhcCCceeeEecCC------ccEEECCCCcHHHHHHHHHhcCCceEEEEcC-----CCeEEEEEE
Confidence 0011345778887 5 7899999999999999999999999999997 799999999
Q ss_pred HHHHHHHHHH
Q 004181 753 RESIILACRA 762 (770)
Q Consensus 753 ~~DIl~~~~~ 762 (770)
++|++++.++
T Consensus 235 ~~dll~~~~~ 244 (245)
T 3l2b_A 235 RFHLISTHKK 244 (245)
T ss_dssp CC--------
T ss_pred HHHhhchhhc
Confidence 9999987654
No 49
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.61 E-value=2.1e-15 Score=160.01 Aligned_cols=128 Identities=16% Similarity=0.241 Sum_probs=113.9
Q ss_pred ccccccccccccceeEEeCCCCHHHHHHHHHhc-----CCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhcccccccc
Q 004181 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAE-----KQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLV 695 (770)
Q Consensus 621 l~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~-----~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V 695 (770)
....+|+++|+++++++++++++.++++.|.++ +++.+||+|++++++|+||.+|+.+. ..+.++
T Consensus 134 ~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~----------~~~~~v 203 (286)
T 2oux_A 134 YEDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN----------DDDTLI 203 (286)
T ss_dssp SCTTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS----------CTTSBH
T ss_pred CChHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC----------CCCCcH
Confidence 345789999999999999999999999999987 78889999999999999999999753 235678
Q ss_pred ccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHHhhhhc
Q 004181 696 SEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALATRKSL 769 (770)
Q Consensus 696 ~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~~~~~l 769 (770)
+++|++ ++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++.+.+..+++..
T Consensus 204 ~~im~~------~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~-----~g~lvGiIT~~Dil~~i~~e~~ed~~ 266 (286)
T 2oux_A 204 ADILNE------RVISVHVGDDQEDVAQTIRDYDFLAVPVTDY-----DDHLLGIVTVDDIIDVIDDEAASDYS 266 (286)
T ss_dssp HHHSBS------CCCCEETTSBHHHHHHHHHHHTCSEEEEECT-----TCBEEEEEEHHHHHHHHHHHHHC---
T ss_pred HHHcCC------CCeeecCCCCHHHHHHHHHHcCCcEEEEEcC-----CCeEEEEEEHHHHHHHHHHHhHHHHH
Confidence 999987 7889999999999999999999999999997 79999999999999999888776653
No 50
>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...
Probab=99.60 E-value=1.8e-14 Score=161.63 Aligned_cols=192 Identities=15% Similarity=0.158 Sum_probs=144.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCchh---HHH----HHHHHHHHHHH-HHhcccccCCHHHHH
Q 004181 348 GELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNGIPKA---VFP----VMGGLAVGLIA-LMFPEILYWGFENVD 419 (770)
Q Consensus 348 ~~l~~~illGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~---~~~----~l~gl~vg~i~-~~~P~~~g~G~~~i~ 419 (770)
..+...+++|+++|+++.+|..+.+++.+++...........+ +.+ .+++++++.+. .+.|+..|+|.++++
T Consensus 19 ~~~~~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~a~GsGip~v~ 98 (446)
T 4ene_A 19 AILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIE 98 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGSSCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCHHHHH
Confidence 4466788999999999999999999988877655432222211 111 12334444443 347999999999998
Q ss_pred HHHccCCCccCccHHHHHHHHHHHHHHHHHhhhcCCccceechHHHHHHHHhHHHHHHHHHhhhcCCCccccccccccch
Q 004181 420 ILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIAQSNPTIHFSILEVASP 499 (770)
Q Consensus 420 ~l~~~~~~~~~~~~~~l~~~~~~K~~~t~lt~gsG~~gG~f~P~l~iGa~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~p 499 (770)
..+++. ..... ......|++.+.+|+++|.|.|.++|+.++||++|..+++.++. +..+.
T Consensus 99 ~~l~~~---~~~~~---~r~~~~k~~~~~lti~~G~s~GrEGP~vqiGa~ig~~~~~~~~~--------------~~~~~ 158 (446)
T 4ene_A 99 GALEDQ---RPVRW---WRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRL--------------KGDEA 158 (446)
T ss_dssp HHHHTC---SCCCH---HHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHHHHTTC--------------CSHHH
T ss_pred HHHhCC---Cccch---HHHHHHHHHHHHHHHhcCCccCCcchHHHHHHHHHHHHHHHcCC--------------CHHHH
Confidence 888754 12231 34567899999999999999999999999999999999987652 12344
Q ss_pred H-HHHHHHHHHHHHHHcCchHHHHHHHHHHh-CCc----chHHHHHHHHHHHHHHhhhccccccch
Q 004181 500 Q-AYGLVGMAATLAGVCQVPLTSVLLLFELT-QDY----RIVLPLLGAVGLSSWFTSGQMRRRDVK 559 (770)
Q Consensus 500 ~-~~alvGaaA~la~~~~aPls~~vi~~Elt-g~~----~~~lPlm~a~~ia~~v~~~~~~~~~~~ 559 (770)
. .+..+|+||.+++++++|++++++.+|.. +++ ..+.|.+++++++.++++.+..+++.|
T Consensus 159 r~~ll~aGaaAG~aaaF~aPlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~~g~~~~~ 224 (446)
T 4ene_A 159 RHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFNHEVALI 224 (446)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTSCSSSCCCCCHHHHHHHHHHHHHHHHHTTTTCCSC
T ss_pred HHHHHHHHHHHHHHHHhCCcchHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHcCCCcee
Confidence 4 89999999999999999999999999965 433 348999999999998887665444433
No 51
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.59 E-value=7e-15 Score=149.14 Aligned_cols=119 Identities=18% Similarity=0.154 Sum_probs=108.3
Q ss_pred ccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhccccccccccccccC
Q 004181 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSAD 702 (770)
Q Consensus 623 ~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~~ 702 (770)
..+++++|.++++++++++++.|+++.|.+++.+.+||+|++++++|+||.+|+.+.. .+.+++++|++
T Consensus 12 ~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~----------~~~~v~~im~~- 80 (213)
T 1vr9_A 12 HMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLD----------LDSSVFNKVSL- 80 (213)
T ss_dssp -CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSC----------TTSBSGGGCBC-
T ss_pred ccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhc----------CCCcHHHHccC-
Confidence 3478999999999999999999999999999999999999899999999999997543 24568999987
Q ss_pred CCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 703 GETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 703 ~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
++.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++.+..
T Consensus 81 -----~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~lvGiit~~Dil~~~~~ 130 (213)
T 1vr9_A 81 -----PDFFVHEEDNITHALLLFLEHQEPYLPVVDE-----EMRLKGAVSLHDFLEALIE 130 (213)
T ss_dssp -----TTCCEETTSBHHHHHHHHHHCCCSEEEEECT-----TCBEEEEEEHHHHHHHHHH
T ss_pred -----CCEEECCCCcHHHHHHHHHHhCCCEEEEEcC-----CCEEEEEEEHHHHHHHHHH
Confidence 7889999999999999999999999999996 7999999999999998754
No 52
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.58 E-value=6.3e-15 Score=155.72 Aligned_cols=127 Identities=23% Similarity=0.276 Sum_probs=108.6
Q ss_pred ccccccccccccceeEEeCCCCHHHHHHHHHhc-----CCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhcccccccc
Q 004181 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAE-----KQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLV 695 (770)
Q Consensus 621 l~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~-----~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V 695 (770)
....+++++|+++++++++++++.++++.|.++ +.+.+||+|++++++|+||.+|+... ..+.++
T Consensus 132 ~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~----------~~~~~v 201 (278)
T 2yvy_A 132 YEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA----------DPRTRV 201 (278)
T ss_dssp SCTTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS----------CTTCBS
T ss_pred CCcchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC----------CCCCcH
Confidence 345789999999999999999999999999987 67999999999999999999999753 135678
Q ss_pred ccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHHhhhh
Q 004181 696 SEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALATRKS 768 (770)
Q Consensus 696 ~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~~~~~ 768 (770)
+++|++ ++.++++++++.+++++|.+++.+.+||||+ +|+++|+||.+|+++.+.+..+++.
T Consensus 202 ~~im~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~lvGivT~~Dil~~i~~e~~ed~ 263 (278)
T 2yvy_A 202 AEIMNP------KVVYVRTDTDQEEVARLMADYDFTVLPVVDE-----EGRLVGIVTVDDVLDVLEAEATEDI 263 (278)
T ss_dssp TTTSBS------SCCCEETTSBHHHHHHHHHHHTCSEEEEECT-----TSBEEEEEEHHHHHHHC--------
T ss_pred HHHhCC------CCeEEeCCCCHHHHHHHHHhcCCCEEEEEeC-----CCeEEEEEEHHHHHHHHHHHhHHHH
Confidence 999987 7889999999999999999999999999997 7999999999999999887766554
No 53
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.56 E-value=4.7e-14 Score=165.55 Aligned_cols=190 Identities=16% Similarity=0.106 Sum_probs=142.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc----C-CchhHHHHHHHHHHHHHH-HHhcccccCCHHHHHHHH
Q 004181 349 ELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDN----G-IPKAVFPVMGGLAVGLIA-LMFPEILYWGFENVDILL 422 (770)
Q Consensus 349 ~l~~~illGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~----~-~~~~~~~~l~gl~vg~i~-~~~P~~~g~G~~~i~~l~ 422 (770)
.+.+.+++|+++|+++.+|..+..++.+++..+.... + +.+.+.|++++++.+.+. .+.|+..|+|.++++..+
T Consensus 10 ~~~~~~lvGi~~gl~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~a~GsGIp~v~~~l 89 (632)
T 3org_A 10 LVCFLTLLGVTAALFIFAVDLAVHGLEELRMKISRLAGRFAGYILYVVSGVALCLLSTFWCAVLSTEAEGSGLPQMKSIL 89 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGCBCSHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHH
Confidence 4566789999999999999999888877654332211 1 112335677777777665 678999999999998877
Q ss_pred ccCCCccCccHHHHHHHHHHHHHHHHHhhhcCCccceechHHHHHHHHhHHHHH--HHHHhhhcCCCccccccccccchH
Q 004181 423 ESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGK--FINFAIAQSNPTIHFSILEVASPQ 500 (770)
Q Consensus 423 ~~~~~~~~~~~~~l~~~~~~K~~~t~lt~gsG~~gG~f~P~l~iGa~~G~~~g~--~~~~~~~~~~~~~~~~~~~~~~p~ 500 (770)
++.. +......-+..++.|++.+.+|+|+|+|.|.++|++++||++|..+++ .++....+ ..+..
T Consensus 90 ~g~~--~~~~~~~~~~~~~~K~~~~~l~igsG~s~GrEGP~vqiGa~ig~~~~~~~~f~~~~~~-----------~~~~r 156 (632)
T 3org_A 90 SGFY--DKMRSALELRVLFAKALGLICAIGGGLPVGWEGPNVHIACIIAHQFYRLGVFKELCTD-----------RALRL 156 (632)
T ss_dssp TTTH--HHHGGGGSHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHTTSHHHHHHHHS-----------HHHHH
T ss_pred hCcc--ccccccccHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHHHHHhhhhhhccccCC-----------HHHHH
Confidence 6531 000111224567789999999999999999999999999999998887 66532211 23456
Q ss_pred HHHHHHHHHHHHHHcCchHHHHHHHHHHhC-Cc--chHHHHHHHHHHHHHHhhh
Q 004181 501 AYGLVGMAATLAGVCQVPLTSVLLLFELTQ-DY--RIVLPLLGAVGLSSWFTSG 551 (770)
Q Consensus 501 ~~alvGaaA~la~~~~aPls~~vi~~Eltg-~~--~~~lPlm~a~~ia~~v~~~ 551 (770)
.+..+|+||.+|++++||+++++|.+|... ++ ..+.|.++++++++++++.
T Consensus 157 ~ll~aGaaAG~aaaF~aPlaGvlFalE~~~~~~~~~~~~~~~~as~~a~~v~~~ 210 (632)
T 3org_A 157 QTLAAACAVGLASSFGAPLGGVLYSIETIASFYLVQAFWKGVLSALSGAIVYEL 210 (632)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHTCSEEETTHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhCCccHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999865 33 4678999999898877653
No 54
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.53 E-value=6.4e-14 Score=150.68 Aligned_cols=134 Identities=20% Similarity=0.205 Sum_probs=114.3
Q ss_pred ccccccccc---cccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhcccccccccc
Q 004181 621 KRRVFVSEV---MRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSE 697 (770)
Q Consensus 621 l~~i~V~di---M~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~d 697 (770)
....+++++ |.+++.++++++++.++++.|.+++++.+||+|++|+++|+||.+|+.+.+..... ...+.++++
T Consensus 184 ~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~---~~~~~~v~~ 260 (323)
T 3t4n_C 184 FLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIY---NDLSLSVGE 260 (323)
T ss_dssp GCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTTHH---HHTTSBHHH
T ss_pred hhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhchh---hhccCCHHH
Confidence 345689999 99999999999999999999999999999999999999999999999988753221 123567889
Q ss_pred ccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 698 MCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 698 im~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
+|++++....++.++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++++..
T Consensus 261 ~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-----~~~l~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 261 ALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD-----VGRLVGVLTLSDILKYILL 320 (323)
T ss_dssp HGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECT-----TSBEEEEEEHHHHHHHHHH
T ss_pred HHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECC-----CCcEEEEEEHHHHHHHHHh
Confidence 99862221225789999999999999999999999999997 7999999999999998754
No 55
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.53 E-value=4e-14 Score=160.45 Aligned_cols=126 Identities=23% Similarity=0.283 Sum_probs=112.8
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhc-----CCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhccccccccc
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAE-----KQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVS 696 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~-----~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~ 696 (770)
...+++++|+++++++++++++.|+++.|+++ +.+.+||+|++++++|+||.+|+... ..+.+++
T Consensus 153 ~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~----------~~~~~v~ 222 (473)
T 2zy9_A 153 EEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA----------DPRTRVA 222 (473)
T ss_dssp CTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS----------CTTSBGG
T ss_pred CCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC----------CCCCcHH
Confidence 45789999999999999999999999999986 46899999999999999999999752 2356799
Q ss_pred cccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHHhhhh
Q 004181 697 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALATRKS 768 (770)
Q Consensus 697 dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~~~~~ 768 (770)
++|++ ++.+++++++++++.+.|.+++.+.+||||+ +|+++|+||.+|+++.+.+..+++.
T Consensus 223 dim~~------~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe-----~g~lvGiIT~~Dil~~i~~e~~ed~ 283 (473)
T 2zy9_A 223 EIMNP------KVVYVRTDTDQEEVARLMADYDFTVLPVVDE-----EGRLVGIVTVDDVLDVLEAEATEDI 283 (473)
T ss_dssp GTSBS------SCCCEESSSBHHHHHHHHHHHTCSEEEEECT-----TSBEEEEEEHHHHHHHHHHHHHHHH
T ss_pred HHhCC------CCeEEeCCCcHHHHHHHHHhcCCcEEEEEcC-----CCEEEEEEehHhhHHHHHHHhhhhh
Confidence 99987 7899999999999999999999999999997 8999999999999999877665443
No 56
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.52 E-value=3.1e-14 Score=163.83 Aligned_cols=133 Identities=12% Similarity=0.041 Sum_probs=113.7
Q ss_pred hhccccccccccccceeEEeCC-CCHHHHHHHHHhcCCcEEEEeC-CCCcEEEEEehHHHHHHHHHHhhhhccccccccc
Q 004181 619 ELKRRVFVSEVMRTRYVTVLMT-TLLIEALTLMLAEKQSCAMIVD-NDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVS 696 (770)
Q Consensus 619 ~~l~~i~V~diM~~~~~~v~~~-~tl~eal~~m~~~~~~~lpVVd-~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~ 696 (770)
..+...+|+|+|+++++++.++ +++.|+++.|.+++++.+||+| ++++++|+||.+||.+.+.... ...+.+++
T Consensus 379 ~~l~~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~----~~~~~~V~ 454 (527)
T 3pc3_A 379 HWWWSLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMN----RQQSDPAI 454 (527)
T ss_dssp CTTTTSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHC----CCTTSBGG
T ss_pred ccccCCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhcc----CcCCCcHH
Confidence 4477889999999999999999 9999999999999999999999 7899999999999998875422 23456799
Q ss_pred cccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHHH
Q 004181 697 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRALA 764 (770)
Q Consensus 697 dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~~ 764 (770)
++|++ ++.++++++++.+++++|.+++. +||||++. ..+|+++||||++||++++.+..
T Consensus 455 ~im~~------~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~-~~~g~lvGIVT~~Dll~~l~~~~ 513 (527)
T 3pc3_A 455 KALNK------RVIRLNESEILGKLARVLEVDPS--VLILGKNP-AGKVELKALATKLDVTTFIAAGK 513 (527)
T ss_dssp GGEET------TCCEEETTSBHHHHHHHHTTCSE--EEEEEECS-SSCEEEEEEEEHHHHHHHHHTCC
T ss_pred HHhcC------CCeEECCCCcHHHHHHHHhhCCE--EEEEeCCc-ccCCeEEEEEEHHHHHHHHHhcc
Confidence 99988 78999999999999999977764 79999610 00289999999999999987643
No 57
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.51 E-value=2.4e-14 Score=150.63 Aligned_cols=130 Identities=22% Similarity=0.297 Sum_probs=108.8
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHH------HHHH------HH------
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIE------EFSK------YA------ 683 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~------~~l~------~~------ 683 (770)
...+++++|.+++.++++++++.++++.|.+++.+.+||+|++++++|++|.+|+. +.+. ..
T Consensus 124 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (282)
T 2yzq_A 124 KGVEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIMKSTELAASSEEEWIL 203 (282)
T ss_dssp GGCBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC-----------------
T ss_pred ccCcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhhccchhhhhhhhhhhc
Confidence 35689999999999999999999999999999999999999899999999999998 4432 00
Q ss_pred --h------hhhccccccccccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHH
Q 004181 684 --Q------AKTSRSKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRES 755 (770)
Q Consensus 684 --~------~~~~~~~~~~V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~D 755 (770)
. .......+.+++++|++ ++.++++++++.+|+++|.+++.+++||+|+ +|+++|+||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~v~~im~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~~~lvGiit~~D 272 (282)
T 2yzq_A 204 ESHPTLLFEKFELQLPNKPVAEIMTR------DVIVATPHMTVHEVALKMAKYSIEQLPVIRG-----EGDLIGLIRDFD 272 (282)
T ss_dssp ---------------CCCBGGGTCBS------SCCCBCTTSBHHHHHHHHHHHTCSEEEEEET-----TTEEEEEEEHHH
T ss_pred ccchHHHHhHhhhhhccCCHHHhcCC------CCceeCCCCCHHHHHHHHHHcCcceeEEECC-----CCCEEEEEeHHH
Confidence 0 00012245678999988 7899999999999999999999999999996 689999999999
Q ss_pred HHHHHHH
Q 004181 756 IILACRA 762 (770)
Q Consensus 756 Il~~~~~ 762 (770)
+++++.+
T Consensus 273 il~~~~~ 279 (282)
T 2yzq_A 273 LLKVLVK 279 (282)
T ss_dssp HGGGGCC
T ss_pred HHHHHHh
Confidence 9987643
No 58
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.50 E-value=7.2e-14 Score=148.33 Aligned_cols=123 Identities=21% Similarity=0.223 Sum_probs=111.5
Q ss_pred ccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhccccccccccccccC
Q 004181 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSAD 702 (770)
Q Consensus 623 ~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~~ 702 (770)
+.+++++|++++.++.+++++.++++.|.+++++.+||+|++++++|++|.+|+.+.+.. ...+.+++++|.+
T Consensus 92 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~~------~~~~~~v~~~m~~- 164 (296)
T 3ddj_A 92 TTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKD------LDEIFPVKVFMST- 164 (296)
T ss_dssp TSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGGG------SCCCCBHHHHSBC-
T ss_pred cccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhhc------ccccccHHHhhcC-
Confidence 578999999999999999999999999999999999999999999999999999876531 1234578999987
Q ss_pred CCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 703 GETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 703 ~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
++.++++++++.++++.|.+++.+.+||+|+ +|+++|+||++|+++.+.+
T Consensus 165 -----~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~~~~ 214 (296)
T 3ddj_A 165 -----KVQTIYKEVRLDQAVKLMLRRGFRRLPVIDD-----DNKVVGIVTVVNAIKQLAK 214 (296)
T ss_dssp -----SCCCEETTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHHHH
T ss_pred -----CCeEECCCCCHHHHHHHHHHcCCCEEEEEcC-----CCEEEEEEEHHHHHHHHHH
Confidence 7889999999999999999999999999997 7999999999999998764
No 59
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.50 E-value=3.6e-14 Score=148.84 Aligned_cols=126 Identities=14% Similarity=0.160 Sum_probs=109.3
Q ss_pred ccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhh-------cccccccc
Q 004181 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKT-------SRSKKLLV 695 (770)
Q Consensus 623 ~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~-------~~~~~~~V 695 (770)
..+++++|.+++.++++++++.++++.|.+++.+.+||+ ++|+++|+||.+|+.+.+....... ....+.++
T Consensus 147 ~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v 225 (280)
T 3kh5_A 147 NEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLGSDWAFNHMQTGNVREITNVRM 225 (280)
T ss_dssp TCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHHTSHHHHHHHHSCCTHHHHHCBH
T ss_pred CCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHHhhhhhhhhhcccchhhhhCCcH
Confidence 358999999999999999999999999999999999999 6899999999999998874221100 11245678
Q ss_pred ccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHH
Q 004181 696 SEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILAC 760 (770)
Q Consensus 696 ~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~ 760 (770)
+++|++ ++.++++++++.+|++.|.+++.+++||+|+ +|+++|+||++|+++++
T Consensus 226 ~~~m~~------~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~-----~g~~~Givt~~dil~~l 279 (280)
T 3kh5_A 226 EEIMKR------DVITAKEGDKLKKIAEIMVTNDIGALPVVDE-----NLRIKGIITEKDVLKYF 279 (280)
T ss_dssp HHHSBS------SCCCBCTTCBHHHHHHHHHHHTCCEEEEECT-----TCBEEEEEEHHHHGGGG
T ss_pred HHHhcC------CCEEECCCCCHHHHHHHHHHCCCCEEEEECC-----CCeEEEEEeHHHHHHhh
Confidence 999987 7889999999999999999999999999997 78999999999998764
No 60
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.49 E-value=1.8e-13 Score=143.54 Aligned_cols=122 Identities=25% Similarity=0.303 Sum_probs=109.7
Q ss_pred ccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhccccccccccccccC
Q 004181 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSAD 702 (770)
Q Consensus 623 ~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~~ 702 (770)
+.+++++|.+++.++++++++.++++.|.+++++.+||+|++++++|++|.+|+.+.+.... ..+.+++++|++
T Consensus 83 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~-----~~~~~v~~~m~~- 156 (280)
T 3kh5_A 83 NEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKI-----DENEVIDDYITR- 156 (280)
T ss_dssp TSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGS-----CTTCBSGGGCBC-
T ss_pred hhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcC-----CCCCCHHHHhCC-
Confidence 56899999999999999999999999999999999999999999999999999998764221 233468899987
Q ss_pred CCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHH
Q 004181 703 GETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (770)
Q Consensus 703 ~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~ 761 (770)
++.++++++++.++++.|.+++.+.+||++ +|+++|+||.+|+++.+.
T Consensus 157 -----~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~------~~~~~Givt~~dl~~~~~ 204 (280)
T 3kh5_A 157 -----DVIVATPGERLKDVARTMVRNGFRRLPVVS------EGRLVGIITSTDFIKLLG 204 (280)
T ss_dssp -----SCCCBCTTCBHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHHHHT
T ss_pred -----CCeEECCCCcHHHHHHHHHHcCCCEEEEEE------CCEEEEEEEHHHHHHHHh
Confidence 788999999999999999999999999995 789999999999999874
No 61
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.45 E-value=4.7e-13 Score=144.60 Aligned_cols=133 Identities=17% Similarity=0.123 Sum_probs=111.0
Q ss_pred cccccc---ccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhcccccccccccc
Q 004181 623 RVFVSE---VMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMC 699 (770)
Q Consensus 623 ~i~V~d---iM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim 699 (770)
..++++ +|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.... ....+.++.++|
T Consensus 181 ~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~---~~~~~~~v~~~m 257 (334)
T 2qrd_G 181 RVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQDGD---YSNLDLSVGEAL 257 (334)
T ss_dssp CCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHTTSC---GGGGGSBHHHHH
T ss_pred hCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhhccc---cccccCcHHHHH
Confidence 467888 58999999999999999999999999999999999999999999999998764211 012346688888
Q ss_pred ccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHH
Q 004181 700 SADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRAL 763 (770)
Q Consensus 700 ~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~ 763 (770)
++.....+++.++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++++.+.
T Consensus 258 ~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-----~g~l~Giit~~dil~~~~~~ 316 (334)
T 2qrd_G 258 LKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDE-----NLKLEGILSLADILNYIIYD 316 (334)
T ss_dssp TTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECT-----TCBEEEEEEHHHHHHHHHSC
T ss_pred hcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECC-----CCeEEEEEeHHHHHHHHHhc
Confidence 730000025789999999999999999999999999997 79999999999999987643
No 62
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.42 E-value=1.9e-13 Score=143.68 Aligned_cols=117 Identities=23% Similarity=0.227 Sum_probs=88.9
Q ss_pred cccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhccccccccccccccCC
Q 004181 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSADG 703 (770)
Q Consensus 624 i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~~~ 703 (770)
++|+++|++++.++++++++.+|++.|.+++++.+||+|++++++|+++.+|+.+... +.+++++|.+
T Consensus 1 m~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~~~~~Giv~~~dl~~~~~----------~~~v~~~m~~-- 68 (282)
T 2yzq_A 1 MRVKTIMTQNPVTITLPATRNYALELFKKYKVRSFPVVNKEGKLVGIISVKRILVNPD----------EEQLAMLVKR-- 68 (282)
T ss_dssp CBHHHHSEESCCCEESSCC------------CCEEEEECTTCCEEEEEESSCC--------------------CCCBS--
T ss_pred CchHHhccCCCeEECCCCcHHHHHHHHHHcCCCeEEEEcCCCcEEEEEEHHHHHhhhc----------cCCHHHHcCC--
Confidence 4789999999999999999999999999999999999998899999999999986542 3568889987
Q ss_pred CCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHH-HHH
Q 004181 704 ETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIIL-ACR 761 (770)
Q Consensus 704 ~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~-~~~ 761 (770)
++.++++++++.++++.|.+++.+.+||+|+ +|+++|+||++|+++ .+.
T Consensus 69 ----~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-----~~~~~Giit~~di~~~~~~ 118 (282)
T 2yzq_A 69 ----DVPVVKENDTLKKAAKLMLEYDYRRVVVVDS-----KGKPVGILTVGDIIRRYFA 118 (282)
T ss_dssp ----CCCEEETTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHTTT
T ss_pred ----CCcEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCEEEEEEEHHHHHHHHHh
Confidence 6889999999999999999999999999997 789999999999998 554
No 63
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.40 E-value=1.1e-12 Score=141.45 Aligned_cols=136 Identities=13% Similarity=0.171 Sum_probs=111.7
Q ss_pred hhhhcccccccccc--ccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCC-CcEEEEEehHHHHHHHHHHhhh-h---cc
Q 004181 617 VEELKRRVFVSEVM--RTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAK-T---SR 689 (770)
Q Consensus 617 ~~~~l~~i~V~diM--~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~-g~lvGiVt~~dL~~~l~~~~~~-~---~~ 689 (770)
-.+.+.+.+|+|+| +++++++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+.+.+...... . ..
T Consensus 28 ~~~~l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~~~~~~ 107 (330)
T 2v8q_E 28 YTTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQIYE 107 (330)
T ss_dssp HHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccccchhH
Confidence 45667889999999 7789999999999999999999999999999987 7999999999999876432110 0 01
Q ss_pred ccccc-------cccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 690 SKKLL-------VSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 690 ~~~~~-------V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
..+.. ++++|.+ ++.++++++++.++++.|.+++.+.+||+|++ +|+++|+||.+|+++.+.+
T Consensus 108 l~~~~~~~~~~~~~~im~~------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~----~~~~~Givt~~dl~~~~~~ 177 (330)
T 2v8q_E 108 LEEHKIETWREVYLQDSFK------PLVCISPNASLFDAVSSLIRNKIHRLPVIDPE----SGNTLYILTHKRILKFLKL 177 (330)
T ss_dssp GGGCBHHHHHHHHSSSSCC------CCCCBCTTSBHHHHHHHHHHHTCSCEEEECTT----TCCEEEEECHHHHHHHHHH
T ss_pred HhhccHHHHHHHHhhcccC------CceEeCCCCCHHHHHHHHHHCCCCeEEEEeCC----CCcEEEEEcHHHHHHHHHH
Confidence 11122 3456766 78899999999999999999999999999841 4799999999999998754
No 64
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.39 E-value=7.5e-13 Score=142.78 Aligned_cols=132 Identities=14% Similarity=0.098 Sum_probs=108.4
Q ss_pred cccccc--cc-cceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhccccccccccccc
Q 004181 624 VFVSEV--MR-TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCS 700 (770)
Q Consensus 624 i~V~di--M~-~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~ 700 (770)
.+++++ |. +++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+...... ....+.++.++|.
T Consensus 190 ~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~~~~~~---~~~~~~~v~~~~~ 266 (330)
T 2v8q_E 190 KSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKT---YNNLDVSVTKALQ 266 (330)
T ss_dssp SBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGGGGSSC---CCCCSSBHHHHGG
T ss_pred CCHHHhcccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHHHhccc---cccccCcHHHHHh
Confidence 345555 55 78999999999999999999999999999999999999999999987653110 1112456788885
Q ss_pred cCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHH
Q 004181 701 ADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRAL 763 (770)
Q Consensus 701 ~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~ 763 (770)
....+.+++.++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++++.+.
T Consensus 267 ~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~-----~g~l~Giit~~Dil~~~~~~ 324 (330)
T 2v8q_E 267 HRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDE-----HDVVKGIVSLSDILQALVLT 324 (330)
T ss_dssp GCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECT-----TSBEEEEEEHHHHHHHHHSS
T ss_pred ccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcC-----CCcEEEEEeHHHHHHHHHhh
Confidence 32222237899999999999999999999999999997 79999999999999987654
No 65
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.38 E-value=1.2e-12 Score=140.55 Aligned_cols=126 Identities=15% Similarity=0.213 Sum_probs=105.2
Q ss_pred ccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCc-----EEEEEehHHHHHHHHHHhhhhccccccccccc-
Q 004181 625 FVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNI-----LIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEM- 698 (770)
Q Consensus 625 ~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~-----lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~di- 698 (770)
++.++|.++++++++++++.++++.|.+++.+.+||+|++++ ++|++|.+|+.+.+...... ....+.+++++
T Consensus 115 ~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~-~~~~~~~v~~~~ 193 (323)
T 3t4n_C 115 RALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRE-THFLKIPIGDLN 193 (323)
T ss_dssp HHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGG-GGGCCSBGGGTT
T ss_pred HHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCc-hhhhhCcHHHcC
Confidence 456677889999999999999999999999999999998775 99999999999887533221 22345578888
Q ss_pred --cccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 699 --CSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 699 --m~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
|.+ ++.++++++++.++.+.|.+++.+.+||+|+ +|+++|+||++|+++.+.+
T Consensus 194 ~~m~~------~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~-----~~~~~Giit~~dl~~~~~~ 248 (323)
T 3t4n_C 194 IITQD------NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE-----NGYLINVYEAYDVLGLIKG 248 (323)
T ss_dssp CSBCT------TCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-----TCBEEEEEETTHHHHHHHT
T ss_pred CCCCC------CcEEECCCCcHHHHHHHHHHcCCCEEEEECC-----CCeEEEEEeHHHHHHHHhh
Confidence 766 7889999999999999999999999999997 7999999999999998654
No 66
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.36 E-value=1.7e-12 Score=148.09 Aligned_cols=122 Identities=19% Similarity=0.215 Sum_probs=108.2
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCC--CCcEEEEEehHHHHHHHHHHhhhhcccccccccccc
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDN--DNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMC 699 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~--~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim 699 (770)
+-++.++.|.++++++++++++.|+++.|.+++++.+||+|+ +++++|+||.+|++.. ...+.+++++|
T Consensus 111 ~V~~~~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~---------~~~~~~V~~vM 181 (511)
T 3usb_A 111 KVKRSESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFI---------QDYSIKISDVM 181 (511)
T ss_dssp HHHTSSSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTC---------CCSSSBHHHHC
T ss_pred HhhccccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhh---------ccCCCcHHHhc
Confidence 335677888899999999999999999999999999999998 8999999999999641 12456789999
Q ss_pred ccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 700 SADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 700 ~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
++ .++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++....
T Consensus 182 ~~-----~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe-----~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 182 TK-----EQLITAPVGTTLSEAEKILQKYKIEKLPLVDN-----NGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp CC-----CCCCCEETTCCHHHHHHHHHHHTCSEEEEECT-----TSBEEEEEEHHHHHHHHHC
T ss_pred cc-----CCCEEECCCCCHHHHHHHHHHcCCCEEEEEeC-----CCCEeeeccHHHHHHhhhc
Confidence 84 25789999999999999999999999999998 8999999999999998754
No 67
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.30 E-value=6e-13 Score=151.17 Aligned_cols=118 Identities=18% Similarity=0.117 Sum_probs=92.6
Q ss_pred cccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhccccccccccccc-cC
Q 004181 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCS-AD 702 (770)
Q Consensus 624 i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~-~~ 702 (770)
.+++++|.++++++++++++.|+++.|.+++++.+||+|++++++|+||.+|++.. ...+.+++++|+ +
T Consensus 89 k~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~---------~~~~~~v~diM~p~- 158 (496)
T 4fxs_A 89 KIFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV---------TDLTKSVAAVMTPK- 158 (496)
T ss_dssp HHCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC---------CCTTSBGGGTSEEG-
T ss_pred cccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc---------ccCCCcHHHHhcCC-
Confidence 46788999999999999999999999999999999999999999999999999621 134567999998 3
Q ss_pred CCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHH
Q 004181 703 GETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILAC 760 (770)
Q Consensus 703 ~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~ 760 (770)
.++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++..
T Consensus 159 ----~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe-----~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 159 ----ERLATVKEGATGAEVQEKMHKARVEKILVVND-----EFQLKGMITAKDFHKAE 207 (496)
T ss_dssp ----GGCCEEECC----CGGGTCC---CCCEEEECT-----TSBCCEEECCC-----C
T ss_pred ----CCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC-----CCCEEEeehHhHHHHhh
Confidence 13789999999999999999999999999998 89999999999999864
No 68
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.30 E-value=1.6e-11 Score=132.53 Aligned_cols=135 Identities=21% Similarity=0.316 Sum_probs=107.1
Q ss_pred hhhhcccccccccccc--ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCC-CcEEEEEehHHHHHHHHHHhh---hhc--
Q 004181 617 VEELKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQA---KTS-- 688 (770)
Q Consensus 617 ~~~~l~~i~V~diM~~--~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~-g~lvGiVt~~dL~~~l~~~~~---~~~-- 688 (770)
..+.+++.+|+|+|++ +++++++++|+.++++.|.+++++.+||+|++ ++++|+|+.+|+.+.+..... ...
T Consensus 15 ~~~~l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~~~~~~~ 94 (334)
T 2qrd_G 15 IQAFIRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSSSFPEAI 94 (334)
T ss_dssp HHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHHCSCGGGG
T ss_pred HHHHHhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhccCCccHH
Confidence 3455777999999976 57889999999999999999999999999976 899999999999987643211 000
Q ss_pred -ccccccc-------ccccccCCCCccCC--eEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCC-e----EEEEEeH
Q 004181 689 -RSKKLLV-------SEMCSADGETCCVP--CTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRG-Q----LVGLLDR 753 (770)
Q Consensus 689 -~~~~~~V-------~dim~~~~~~~~~~--~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g-~----lvGIIT~ 753 (770)
...+..+ +++|.+ ++ .++.+++++.++++.|.+++.+++||+|+ ++ + ++|+||.
T Consensus 95 ~~~~~~~~~~i~~~l~~im~~------~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~~~~~~Givt~ 163 (334)
T 2qrd_G 95 AEIDKFRLLGLREVERKIGAI------PPETIYVHPMHSLMDACLAMSKSRARRIPLIDV-----DGETGSEMIVSVLTQ 163 (334)
T ss_dssp GGGGSCBHHHHHHHHHHHTCS------CSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEE-----ETTTTEEEEEEEEEH
T ss_pred HHHhhhchhhHHHHHHhhccC------CCceeeeCCCCcHHHHHHHHHHCCceEEEEEeC-----CCCcCccceEEEeeH
Confidence 1112222 234544 45 89999999999999999999999999996 43 4 9999999
Q ss_pred HHHHHHHHH
Q 004181 754 ESIILACRA 762 (770)
Q Consensus 754 ~DIl~~~~~ 762 (770)
+|+++.+..
T Consensus 164 ~dl~~~~~~ 172 (334)
T 2qrd_G 164 YRILKFISM 172 (334)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999988754
No 69
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.29 E-value=2.2e-13 Score=155.43 Aligned_cols=124 Identities=16% Similarity=0.150 Sum_probs=5.7
Q ss_pred hccccccccc-cccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCC---CcEEEEEehHHHHHHHHHHhhhhcccccccc
Q 004181 620 LKRRVFVSEV-MRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND---NILIGLLTLGDIEEFSKYAQAKTSRSKKLLV 695 (770)
Q Consensus 620 ~l~~i~V~di-M~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~---g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V 695 (770)
.+++++..+. |+++++++++++|+.|+++.|.+++++.+||+|++ ++++|+||.+|+++. . ...+.++
T Consensus 92 ~v~~V~~~e~gM~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~-~-------~~~~~~V 163 (503)
T 1me8_A 92 MVHAVKNFKAGFVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID-L-------TQTETKV 163 (503)
T ss_dssp HHHHHHTTTC----------------------------------------------------------------------
T ss_pred HHhhhhhcccCcccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh-h-------ccccCcH
Confidence 3455566666 99999999999999999999999999999999987 899999999999864 1 1235678
Q ss_pred ccccccCCCCccC--CeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 696 SEMCSADGETCCV--PCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 696 ~dim~~~~~~~~~--~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
+++|++ + +.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++||++.+..
T Consensus 164 ~diM~~------~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe-----~g~lvGiIT~~Dil~~~~~ 221 (503)
T 1me8_A 164 SDMMTP------FSKLVTAHQDTKLSEANKIIWEKKLNALPIIDD-----DQHLRYIVFRKDYDRSQVC 221 (503)
T ss_dssp ---------------------------------------------------------------------
T ss_pred HHHhCC------CCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcC-----CCeEEEEEEecHHHHhhhc
Confidence 999987 5 889999999999999999999999999997 8999999999999998753
No 70
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.27 E-value=1.5e-11 Score=140.34 Aligned_cols=120 Identities=21% Similarity=0.183 Sum_probs=107.2
Q ss_pred cccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeC--CCCcEEEEEehHHHHHHHHHHhhhhcccccccccccccc
Q 004181 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVD--NDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSA 701 (770)
Q Consensus 624 i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd--~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~ 701 (770)
.+++++|.+++.++++++++.|+++.|.+++++.+||+| ++++++|+||.+|+.+.. ..+.+++++|++
T Consensus 90 ~~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~---------~~~~~v~~im~~ 160 (491)
T 1zfj_A 90 KRSENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS---------DYNAPISEHMTS 160 (491)
T ss_dssp HHHTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS---------CSSSBTTTSCCC
T ss_pred hhHHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc---------cCCCcHHHHcCC
Confidence 357899999999999999999999999999999999999 889999999999997531 245678999974
Q ss_pred CCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 702 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 702 ~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
.++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++.+.+
T Consensus 161 -----~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~-----~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 161 -----EHLVTAAVGTDLETAERILHEHRIEKLPLVDN-----SGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp -----SCCCCEETTCCHHHHHHHHHHTTCSEEEEECT-----TSBEEEEEEHHHHHHHHHC
T ss_pred -----CCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC-----CCcEEEEEEHHHHHHHHhc
Confidence 14678999999999999999999999999997 8999999999999998763
No 71
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.24 E-value=5.9e-13 Score=151.15 Aligned_cols=120 Identities=21% Similarity=0.083 Sum_probs=4.2
Q ss_pred ccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhccccccccccccccC
Q 004181 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSAD 702 (770)
Q Consensus 623 ~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~~ 702 (770)
..+++++|.++++++++++++.|+++.|.+++++.+||+| +++++|+||.+|++... ..+.+++++|++
T Consensus 87 vk~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~~---------~~~~~V~~vMtp- 155 (490)
T 4avf_A 87 VKKHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRVKP---------NAGDTVAAIMTP- 155 (490)
T ss_dssp HHHCCC--------------------------------------------------------------------------
T ss_pred hcccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhhcc---------ccCCcHHHHhcc-
Confidence 3568899999999999999999999999999999999999 89999999999996321 235678999983
Q ss_pred CCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHH
Q 004181 703 GETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (770)
Q Consensus 703 ~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~ 761 (770)
.+++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++..+
T Consensus 156 ---~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe-----~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 156 ---KDKLVTAREGTPLEEMKAKLYENRIEKMLVVDE-----NFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp -----------------------------------------------------------
T ss_pred ---CCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCcEEEEEehHHhhhhcc
Confidence 014789999999999999999999999999997 899999999999999753
No 72
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.21 E-value=1.2e-12 Score=149.42 Aligned_cols=121 Identities=21% Similarity=0.252 Sum_probs=7.2
Q ss_pred cccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhccccccccccccccCC
Q 004181 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSADG 703 (770)
Q Consensus 624 i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~~~ 703 (770)
.+++++|+++++++++++++.|+++.|.+++++.+||+|++++++|+||.+|+++.. ..+.+++++|++
T Consensus 95 ~~~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~---------~~~~~v~~im~~-- 163 (494)
T 1vrd_A 95 KKTENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEK---------NLSKKIKDLMTP-- 163 (494)
T ss_dssp HTC-----------------------------------------------------------------------------
T ss_pred hhHhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhc---------CCCCcHHHHhCC--
Confidence 467899999999999999999999999999999999999889999999999998631 134568899974
Q ss_pred CCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 704 ETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 704 ~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
.+++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++.+..
T Consensus 164 --~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~-----~g~lvGiIt~~Dll~~~~~ 215 (494)
T 1vrd_A 164 --REKLIVAPPDISLEKAKEILHQHRIEKLPLVSK-----DNKLVGLITIKDIMSVIEH 215 (494)
T ss_dssp ----------------------------------------------------CHHHHTC
T ss_pred --CCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcC-----CCeEEEEEEHHHHHhhhcc
Confidence 124789999999999999999999999999997 8999999999999998654
No 73
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.20 E-value=1.5e-12 Score=144.48 Aligned_cols=113 Identities=17% Similarity=0.189 Sum_probs=0.9
Q ss_pred ccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCC---CCcEEEEEehHHHHHHHHHHhhhhccccccccccccccCC
Q 004181 627 SEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDN---DNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSADG 703 (770)
Q Consensus 627 ~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~---~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~~~ 703 (770)
...|..+++++.|++|+.|++++|.+++++.+||+|+ +++++|+||.+|++.. ..+.+++++|++
T Consensus 141 e~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~----------d~~~~V~evMT~-- 208 (556)
T 4af0_A 141 ENGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ----------DAETPIKSVMTT-- 208 (556)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred ccCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc----------ccceEhhhhccc--
Confidence 4567789999999999999999999999999999986 6899999999998642 124579999998
Q ss_pred CCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHH
Q 004181 704 ETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILAC 760 (770)
Q Consensus 704 ~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~ 760 (770)
+.++++++.++++|.++|.+++++.+||||+ +++++|+||++|+.+..
T Consensus 209 ----~lvt~~~~~~leeA~~iL~~~kieklpVVd~-----~g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 209 ----EVVTGSSPITLEKANSLLRETKKGKLPIVDS-----NGHLVSLVARSDLLKNQ 256 (556)
T ss_dssp ---------------------------------------------------------
T ss_pred ----ceEEecCCCCHHHHHHHHHHccccceeEEcc-----CCcEEEEEEechhhhhh
Confidence 7899999999999999999999999999998 89999999999998764
No 74
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.04 E-value=1.9e-11 Score=139.05 Aligned_cols=114 Identities=24% Similarity=0.336 Sum_probs=2.2
Q ss_pred ccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhccccccccccccccCCC
Q 004181 625 FVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSADGE 704 (770)
Q Consensus 625 ~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~~~~ 704 (770)
..++.|..+++++++++++.++++.|.+++++.+||+|+ ++++|+|+.+|+.. . .+.+++++|++
T Consensus 94 ~~~~~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~--~---------~~~~v~~im~~--- 158 (486)
T 2cu0_A 94 RAERLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA--R---------EGKLVKELMTK--- 158 (486)
T ss_dssp TCC-----------------------------------------------------------------------------
T ss_pred chhhccccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc--C---------CCCCHHHHccC---
Confidence 457789999999999999999999999999999999997 99999999999975 1 24568999987
Q ss_pred CccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHH
Q 004181 705 TCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (770)
Q Consensus 705 ~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~ 761 (770)
++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++...
T Consensus 159 ---~~~~v~~~~~l~eal~~m~~~~~~~lpVVde-----~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 159 ---EVITVPESIEVEEALKIMIENRIDRLPVVDE-----RGKLVGLITMSDLVARKK 207 (486)
T ss_dssp --------------------------------------------------------C
T ss_pred ---CCeEECCcCcHHHHHHHHHHcCCCEEEEEec-----CCeEEEEEEHHHHHHhhh
Confidence 6889999999999999999999999999997 899999999999998754
No 75
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.04 E-value=5.6e-12 Score=144.55 Aligned_cols=121 Identities=18% Similarity=0.216 Sum_probs=71.1
Q ss_pred cccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCC---CCcEEEEEehHHHHHHHHHHhhhhccccccccccccc
Q 004181 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDN---DNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCS 700 (770)
Q Consensus 624 i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~---~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~ 700 (770)
.+++++|.++++++++++++.|+++.|.+++++.+||+|+ +++++|+||.+|+.+... ...+.+++++|+
T Consensus 108 ~~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~-------~~~~~~v~~vm~ 180 (514)
T 1jcn_A 108 KNFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAE-------KDHTTLLSEVMT 180 (514)
T ss_dssp HTCCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC-----------------------
T ss_pred hhhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhh-------ccCCCCHHHHhC
Confidence 3688999999999999999999999999999999999997 589999999999976421 123456888887
Q ss_pred cCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHH
Q 004181 701 ADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILAC 760 (770)
Q Consensus 701 ~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~ 760 (770)
+ .+++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++.+
T Consensus 181 ~----~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~-----~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 181 P----RIELVVAPAGVTLKEANEILQRSKKGKLPIVND-----CDELVAIIARTDLKKNR 231 (514)
T ss_dssp C----CBCCCCEETTCCSTTTTTHHHHHTCSCCCEESS-----SSCCC----CCCCSSCC
T ss_pred C----CCCCeEECCCCCHHHHHHHHHHcCCCcccEECC-----CCeEEEEEEHHHHHHHh
Confidence 4 124789999999999999999999999999997 89999999999988754
No 76
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.77 E-value=7.9e-09 Score=104.36 Aligned_cols=122 Identities=15% Similarity=0.030 Sum_probs=56.3
Q ss_pred ccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhccccccccccccccC
Q 004181 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSAD 702 (770)
Q Consensus 623 ~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~~ 702 (770)
+.+++++|+++++++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.... ...+.+.+
T Consensus 71 ~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~---------~~~~~~~~- 140 (213)
T 1vr9_A 71 DSSVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEAL---------AMDVPGIR- 140 (213)
T ss_dssp TSBSGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSC---------C--------
T ss_pred CCcHHHHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHh---------cCCCCcEE-
Confidence 56899999999999999999999999999999999999998899999999999998764211 12232322
Q ss_pred CCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHH
Q 004181 703 GETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIIL 758 (770)
Q Consensus 703 ~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~ 758 (770)
-.+.+.....++.++.+.|.+++.+.++|++.+.+++..+++.-|+..|+-+
T Consensus 141 ----l~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~~~~~~~~~v~~~v~~~~~~~ 192 (213)
T 1vr9_A 141 ----FSVLLEDKPGELRKVVDALALSNINILSVITTRSGDGKREVLIKVDAVDEGT 192 (213)
T ss_dssp --------------------------------------------------------
T ss_pred ----EEEEeCCCCccHHHHHHHHHHCCCcEEEEEEEecCCCEEEEEEEEccCCHHH
Confidence 0111223445699999999999999999986522222233444444444433
No 77
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.74 E-value=1.7e-08 Score=83.15 Aligned_cols=64 Identities=17% Similarity=0.244 Sum_probs=54.3
Q ss_pred eeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhcccccccccccccc
Q 004181 634 YVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSA 701 (770)
Q Consensus 634 ~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~ 701 (770)
+++++|++++.||++.|.+++.+++||+| +++++|++|.+|+.+.+.. ......+.+++|+|++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~---~~~~~~~~~V~~iMt~ 65 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVA---KGKNPKEVKVEEIMTK 65 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTT---TTCCGGGCBGGGTCEE
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHh---cCCCcccCCHHHhcCC
Confidence 57899999999999999999999999998 6899999999999865432 1223456789999998
No 78
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.44 E-value=3.8e-07 Score=74.22 Aligned_cols=65 Identities=15% Similarity=0.238 Sum_probs=54.3
Q ss_pred ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhcccccccccccccc
Q 004181 633 RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSA 701 (770)
Q Consensus 633 ~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~ 701 (770)
++.++++++++.|+++.|.+++++.+||+|+ ++++|+||.+|+.+.+.... ....+.+++++|++
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~~~---~~~~~~~v~~im~~ 65 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAKG---KNPKEVKVEEIMTK 65 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTTT---CCGGGCBGGGTCEE
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHcC---CCcccCCHHHhcCC
Confidence 3578999999999999999999999999997 99999999999998764221 11346679999987
No 79
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.29 E-value=4.8e-07 Score=87.47 Aligned_cols=59 Identities=17% Similarity=0.275 Sum_probs=54.6
Q ss_pred ccccccccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHH
Q 004181 690 SKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILA 759 (770)
Q Consensus 690 ~~~~~V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~ 759 (770)
..+++|+|+|++ ++.++++++++.+|++.|.+++++.+||+|+ +|+++|+||.+|+++.
T Consensus 15 l~~~~V~diM~~------~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-----~g~lvGiit~~Dll~~ 73 (170)
T 4esy_A 15 IRQVPIRDILTS------PVVTVREDDTLDAVAKTMLEHQIGCAPVVDQ-----NGHLVGIITESDFLRG 73 (170)
T ss_dssp HHTSBGGGGCCS------CCCCEETTSBHHHHHHHHHHTTCSEEEEECT-----TSCEEEEEEGGGGGGG
T ss_pred HcCCCHHHhcCC------CCcEECCcCcHHHHHHHHHHcCCeEEEEEcC-----CccEEEEEEHHHHHHH
Confidence 457889999998 7899999999999999999999999999997 8999999999999764
No 80
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.25 E-value=1.9e-06 Score=70.71 Aligned_cols=46 Identities=11% Similarity=0.213 Sum_probs=42.8
Q ss_pred CeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHH
Q 004181 709 PCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILAC 760 (770)
Q Consensus 709 ~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~ 760 (770)
+++++|++++.||.++|.+++++++||+| +|+++||+|.+|+++.+
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d------~~~lvGIvT~~Di~~~~ 47 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME------GDEILGVVTERDILDKV 47 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE------TTEEEEEEEHHHHHHHT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE------CCEEEEEEEHHHHHHHH
Confidence 57899999999999999999999999998 68999999999998764
No 81
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.22 E-value=2e-06 Score=78.63 Aligned_cols=58 Identities=24% Similarity=0.285 Sum_probs=53.5
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHH
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFS 680 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l 680 (770)
...+++++|++ +.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+
T Consensus 67 ~~~~v~~~m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 67 EAFSMDKVLRT-AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp CCCCHHHHCBC-CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC
T ss_pred CCCCHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 46789999965 78999999999999999999999999999999999999999998764
No 82
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.20 E-value=1.9e-06 Score=79.19 Aligned_cols=59 Identities=31% Similarity=0.381 Sum_probs=54.1
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
...+++++|+ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 70 ~~~~v~~~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 70 GQKQLGAVMR-PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp TTSBHHHHSE-ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred CcCCHHHHhc-CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHc
Confidence 3678999995 5889999999999999999999999999999999999999999998763
No 83
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.17 E-value=2.4e-06 Score=77.20 Aligned_cols=58 Identities=19% Similarity=0.178 Sum_probs=54.9
Q ss_pred cccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 624 i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
.+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 62 ~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 62 KTIEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFG 119 (122)
T ss_dssp CBGGGTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC
T ss_pred cCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhh
Confidence 4899999999999999999999999999999999999999899999999999998764
No 84
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.15 E-value=2.3e-06 Score=82.97 Aligned_cols=63 Identities=13% Similarity=0.139 Sum_probs=52.8
Q ss_pred ccccccccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCC-CeEEEEEeHHHHHHHHH
Q 004181 690 SKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQR-GQLVGLLDRESIILACR 761 (770)
Q Consensus 690 ~~~~~V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~-g~lvGIIT~~DIl~~~~ 761 (770)
..+.+++++|++ ..++.++++++++.+|++.|.+++.+.+||+|+ + ++++|+||.+|+++...
T Consensus 39 l~~~~v~diM~~----~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~-----~~~~lvGivt~~dl~~~~~ 102 (172)
T 3lhh_A 39 LDERTISSLMVP----RSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRN-----NVDDMVGIISAKQLLSESI 102 (172)
T ss_dssp ----CTTTTSEE----GGGCCCEETTSCHHHHHHHHHTCCCSEEEEESS-----STTSEEEEEEHHHHHHHHH
T ss_pred cCCCCHHHhCcc----HHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeC-----CCCeEEEEEEHHHHHHHHh
Confidence 456779999983 126789999999999999999999999999996 5 89999999999998864
No 85
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.12 E-value=6.3e-06 Score=75.57 Aligned_cols=59 Identities=20% Similarity=0.222 Sum_probs=53.2
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
...+++++|++ +.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 67 ~~~~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~ 125 (129)
T 3jtf_A 67 PALDIRSLVRP-AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIV 125 (129)
T ss_dssp TTSCGGGGCBC-CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHH
T ss_pred CCcCHHHHhCC-CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 35689999965 889999999999999999999999999999999999999999998764
No 86
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.12 E-value=2.2e-06 Score=81.84 Aligned_cols=60 Identities=18% Similarity=0.223 Sum_probs=54.5
Q ss_pred hccccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 620 LKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 620 ~l~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
.....+|+++|.+++.++++++++.++++.|.+++ .+||+|++|+++|+||.+|+.+.+.
T Consensus 82 ~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~ 141 (156)
T 3k6e_A 82 IMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVN 141 (156)
T ss_dssp HHTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred cccccCHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHH
Confidence 34578999999999999999999999999998765 5999999999999999999998875
No 87
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.12 E-value=3e-06 Score=79.41 Aligned_cols=60 Identities=25% Similarity=0.337 Sum_probs=56.1
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
...+++++|.++++++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 83 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~ 142 (152)
T 4gqw_A 83 NGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAAL 142 (152)
T ss_dssp -CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred ccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHH
Confidence 356899999999999999999999999999999999999999999999999999999875
No 88
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.12 E-value=5.2e-06 Score=76.98 Aligned_cols=59 Identities=22% Similarity=0.186 Sum_probs=53.8
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
...+++++|++ +.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 68 ~~~~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 68 DSDDVKKLLRP-ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp GGCCGGGTCBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC-
T ss_pred CCcCHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 45789999976 899999999999999999999999999999999999999999987653
No 89
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.11 E-value=5.2e-06 Score=77.96 Aligned_cols=58 Identities=22% Similarity=0.244 Sum_probs=54.9
Q ss_pred ccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 623 ~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
..+++++| +++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 87 ~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 144 (148)
T 3lv9_A 87 KIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIV 144 (148)
T ss_dssp CCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHH
T ss_pred CccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 67899999 88999999999999999999999999999999999999999999998764
No 90
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.10 E-value=4.9e-06 Score=76.40 Aligned_cols=59 Identities=22% Similarity=0.272 Sum_probs=55.9
Q ss_pred ccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 623 ~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
..+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 66 ~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 124 (133)
T 2ef7_A 66 ETKAEEFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAID 124 (133)
T ss_dssp TCBGGGTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred ccCHHHHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999998875
No 91
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.10 E-value=5.6e-06 Score=82.87 Aligned_cols=62 Identities=15% Similarity=0.164 Sum_probs=57.7
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHH
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA 683 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~ 683 (770)
.+.+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.+.
T Consensus 114 ~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e 175 (205)
T 3kxr_A 114 PHEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREH 175 (205)
T ss_dssp TTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred CcchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 45689999999999999999999999999999999999999999999999999999988643
No 92
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.09 E-value=2.2e-06 Score=78.42 Aligned_cols=58 Identities=19% Similarity=0.132 Sum_probs=55.1
Q ss_pred cccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 624 i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
.+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 68 ~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 68 EKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp CBCCGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred CcHHHHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 6799999999999999999999999999999999999999999999999999998764
No 93
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.08 E-value=5.8e-06 Score=85.36 Aligned_cols=65 Identities=12% Similarity=0.129 Sum_probs=57.0
Q ss_pred ccccccccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHHH
Q 004181 690 SKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRAL 763 (770)
Q Consensus 690 ~~~~~V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~~ 763 (770)
..+..++|+|++ ++.++.+++++.+|.++|.+++++.+||||++ ++++++|+||++||++++...
T Consensus 10 ~~~~~v~diMt~------~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~---~~~~LvGiIt~~dl~~~l~~~ 74 (250)
T 2d4z_A 10 KYNIQVGDIMVR------DVTSIASTSTYGDLLHVLRQTKLKFFPFVDTP---DTNTLLGSIDRTEVEGLLQRR 74 (250)
T ss_dssp CSSCBTTSSSBS------SCCCEETTCBHHHHHHHHHHCCCSEEEEESCT---TTCBEEEEEEHHHHHHHHHHH
T ss_pred cCCCChHHhcCC------CCeEECCCCCHHHHHHHHHhcCCCEEEEEecC---CCCeEEEEEEHHHHHHHHHHh
Confidence 456789999998 88999999999999999999999999999961 136899999999999987654
No 94
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.07 E-value=5.8e-06 Score=78.24 Aligned_cols=58 Identities=21% Similarity=0.209 Sum_probs=55.2
Q ss_pred ccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 623 ~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
..+++++| +++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 85 ~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~ 142 (153)
T 3oco_A 85 KAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELF 142 (153)
T ss_dssp TSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHH
T ss_pred CCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHh
Confidence 67899999 89999999999999999999999999999999999999999999998875
No 95
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.07 E-value=4.3e-06 Score=80.93 Aligned_cols=62 Identities=29% Similarity=0.304 Sum_probs=57.7
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHH
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA 683 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~ 683 (770)
...+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+...
T Consensus 96 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~~ 157 (180)
T 3sl7_A 96 YGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQI 157 (180)
T ss_dssp TTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred ccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999987643
No 96
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.07 E-value=4.2e-06 Score=76.98 Aligned_cols=58 Identities=22% Similarity=0.190 Sum_probs=53.4
Q ss_pred ccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 623 ~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
..+++++| +++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 69 ~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 69 KEIMLRAA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIV 126 (130)
T ss_dssp HHHHHHHS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred hhhHHHhc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHh
Confidence 35789999 67889999999999999999999999999999999999999999998764
No 97
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.05 E-value=9.7e-06 Score=76.13 Aligned_cols=60 Identities=18% Similarity=0.234 Sum_probs=55.0
Q ss_pred ccccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHH
Q 004181 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (770)
Q Consensus 621 l~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~ 682 (770)
....+++++|.+++.++++++++.++++.|.+++. +||+|++|+++|+||.+|+.+.+.+
T Consensus 84 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~ 143 (150)
T 3lqn_A 84 LEEMKVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNK 143 (150)
T ss_dssp GGGCBGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred HhcCCHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHH
Confidence 35678999999999999999999999999999876 9999999999999999999998753
No 98
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.01 E-value=7.2e-06 Score=74.21 Aligned_cols=59 Identities=24% Similarity=0.245 Sum_probs=55.2
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
...+++++|.+++.++++++++.++++.|.+++.+.+||+|+ |+++|+||.+|+.+.+.
T Consensus 63 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 63 AEVKVWEVMERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKM 121 (125)
T ss_dssp TTSBHHHHCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC
T ss_pred cccCHHHHcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 467899999999999999999999999999999999999997 99999999999998764
No 99
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.01 E-value=8e-06 Score=83.76 Aligned_cols=59 Identities=22% Similarity=0.322 Sum_probs=54.8
Q ss_pred ccccccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHH
Q 004181 692 KLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (770)
Q Consensus 692 ~~~V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~ 761 (770)
+.+++|+|++ ++.++++++++.+|+++|.+++++++||+|+ +|+++|+||..|+++.+.
T Consensus 6 ~~~v~~im~~------~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~-----~~~l~Giit~~di~~~~~ 64 (245)
T 3l2b_A 6 KLKVEDLEMD------KIAPLAPEVSLKMAWNIMRDKNLKSIPVADG-----NNHLLGMLSTSNITATYM 64 (245)
T ss_dssp CCBGGGSCCB------CCCCBCTTCBHHHHHHHHHHTTCSEEEEECT-----TCBEEEEEEHHHHHHHHH
T ss_pred cCcHHHhcCC------CCcEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCEEEEEEEHHHHHHHHH
Confidence 4578999988 7899999999999999999999999999997 799999999999999874
No 100
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.01 E-value=1.2e-05 Score=65.15 Aligned_cols=47 Identities=11% Similarity=0.195 Sum_probs=43.5
Q ss_pred CeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHH
Q 004181 709 PCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (770)
Q Consensus 709 ~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~ 761 (770)
+.++++++++.+|++.|.+++.+.+||+| +|+++|+||.+|+++.+.
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d------~~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME------GDEILGVVTERDILDKVV 48 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE------TTEEEEEEEHHHHHHHTT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEE------CCEEEEEEEHHHHHHHHH
Confidence 56899999999999999999999999999 589999999999999853
No 101
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.99 E-value=6.6e-06 Score=78.15 Aligned_cols=59 Identities=31% Similarity=0.193 Sum_probs=55.5
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
...+++++|.+ ++++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 94 ~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 94 IAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALW 152 (157)
T ss_dssp SSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred cCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 46789999999 999999999999999999999999999998999999999999998875
No 102
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=97.99 E-value=7e-06 Score=75.65 Aligned_cols=59 Identities=22% Similarity=0.339 Sum_probs=55.4
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
...+++++|.+++.++++++++.++++.|.+++.+.+||+| +|+++|+||.+|+.+.+.
T Consensus 72 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 72 KDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp GGSBGGGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred ccCCHHHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHH
Confidence 46789999999999999999999999999999999999999 799999999999998764
No 103
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=97.98 E-value=7.9e-06 Score=75.44 Aligned_cols=60 Identities=23% Similarity=0.321 Sum_probs=55.0
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcC-----CcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEK-----QSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~-----~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
.+.+++++|.+++.++++++++.++++.|.+++ .+.+||+|++|+++|+||.+|+.+.+.
T Consensus 71 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 71 LETTIGDVMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp SSCBHHHHSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CCcCHHHHhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 456899999999999999999999999999999 999999998999999999999998764
No 104
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=97.96 E-value=1.4e-05 Score=73.73 Aligned_cols=58 Identities=21% Similarity=0.316 Sum_probs=52.9
Q ss_pred ccccccccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHH
Q 004181 690 SKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIIL 758 (770)
Q Consensus 690 ~~~~~V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~ 758 (770)
..+..++++|.+ ++.++++++++.+|.+.|.+++.+.+||+|+ +|+++|+||.+|+++
T Consensus 4 l~~~~v~~im~~------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~ 61 (138)
T 2yzi_A 4 DMKAPIKVYMTK------KLLGVKPSTSVQEASRLMMEFDVGSLVVIND-----DGNVVGFFTKSDIIR 61 (138)
T ss_dssp CTTSBGGGTCBC------CCCEECTTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHH
T ss_pred hhhhhHHHHhcC------CCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCcEEEEEeHHHHHH
Confidence 356778999987 7889999999999999999999999999997 799999999999984
No 105
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=97.96 E-value=1.2e-05 Score=74.71 Aligned_cols=58 Identities=12% Similarity=0.170 Sum_probs=53.0
Q ss_pred cccccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCC--eEEEEEeHHHHHHHHH
Q 004181 693 LLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRG--QLVGLLDRESIILACR 761 (770)
Q Consensus 693 ~~V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g--~lvGIIT~~DIl~~~~ 761 (770)
..++++|.+ ++.++++++++.+|++.|.+++.+.+||+|+ ++ +++|+||.+|+++.+.
T Consensus 5 ~~v~~im~~------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~~~Givt~~dl~~~~~ 64 (141)
T 2rih_A 5 IRTSELLKR------PPVSLPETATIREVATELAKNRVGLAVLTAR-----DNPKRPVAVVSERDILRAVA 64 (141)
T ss_dssp CBGGGGCCS------CCEEEETTCBHHHHHHHHHHHTCSEEEEEET-----TEEEEEEEEEEHHHHHHHHH
T ss_pred eEHHHHhcC------CCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC-----CCcceeEEEEEHHHHHHHHh
Confidence 468899987 7899999999999999999999999999996 67 9999999999998764
No 106
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=97.95 E-value=9e-06 Score=75.45 Aligned_cols=59 Identities=22% Similarity=0.253 Sum_probs=53.3
Q ss_pred cccccccccc------ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 623 RVFVSEVMRT------RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 623 ~i~V~diM~~------~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
..+++++|.+ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 76 ~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 76 SLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp CSBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 5689999986 6899999999999999999999999999998999999999999998764
No 107
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=97.95 E-value=1.3e-05 Score=76.45 Aligned_cols=59 Identities=24% Similarity=0.383 Sum_probs=53.9
Q ss_pred ccccccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHH
Q 004181 692 KLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (770)
Q Consensus 692 ~~~V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~ 761 (770)
..+++++|++ ++.++++++++.+|++.|.+++.+.+||+|+ +|+++|+||.+|+++...
T Consensus 4 ~~~v~dim~~------~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-----~~~lvGivt~~dl~~~~~ 62 (160)
T 2o16_A 4 MIKVEDMMTR------HPHTLLRTHTLNDAKHLMEALDIRHVPIVDA-----NKKLLGIVSQRDLLAAQE 62 (160)
T ss_dssp CCBGGGTSEE------SCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-----TCBEEEEEEHHHHHHHHH
T ss_pred cCcHHHHhcC------CCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCcEEEEEeHHHHHHHHH
Confidence 4568999987 7889999999999999999999999999997 799999999999998764
No 108
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.95 E-value=1.3e-05 Score=75.56 Aligned_cols=58 Identities=16% Similarity=0.318 Sum_probs=53.8
Q ss_pred ccccccccc------cceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHH
Q 004181 623 RVFVSEVMR------TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFS 680 (770)
Q Consensus 623 ~i~V~diM~------~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l 680 (770)
+.+++++|. +++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+
T Consensus 86 ~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 86 DVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp TSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred cchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHH
Confidence 457889996 7899999999999999999999999999999889999999999998875
No 109
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=97.93 E-value=1.4e-05 Score=76.03 Aligned_cols=55 Identities=22% Similarity=0.277 Sum_probs=51.2
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHH
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIE 677 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~ 677 (770)
...+++++|++ +.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.
T Consensus 101 ~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 101 EQFHLKSILRP-AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp GGCCHHHHCBC-CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred CcccHHHHcCC-CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 46789999976 88999999999999999999999999999999999999999984
No 110
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=97.92 E-value=9.5e-06 Score=77.27 Aligned_cols=61 Identities=10% Similarity=0.166 Sum_probs=56.9
Q ss_pred ccccccccccc--ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCC---cEEEEEehHHHHHHHHH
Q 004181 622 RRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDN---ILIGLLTLGDIEEFSKY 682 (770)
Q Consensus 622 ~~i~V~diM~~--~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g---~lvGiVt~~dL~~~l~~ 682 (770)
...+++++|.+ ++.++++++++.++++.|.+++.+.+||+|++| +++|+||.+|+.+.+.+
T Consensus 79 ~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 79 TSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp TTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHH
T ss_pred cCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHH
Confidence 56789999998 899999999999999999999999999999888 99999999999998764
No 111
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=97.92 E-value=8.3e-06 Score=77.29 Aligned_cols=60 Identities=23% Similarity=0.305 Sum_probs=56.3
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHH
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~ 682 (770)
...+++++|.+++.++++++++.++++.|.+++.+.+||+| +|+++|+||.+|+.+.+..
T Consensus 76 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~ 135 (157)
T 4fry_A 76 KATRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIA 135 (157)
T ss_dssp SSCBHHHHSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHT
T ss_pred cccCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999 7999999999999998763
No 112
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.92 E-value=2e-05 Score=76.48 Aligned_cols=81 Identities=6% Similarity=-0.004 Sum_probs=61.2
Q ss_pred EEEEehHHHHHHHHHHhhhhccccccccccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCC-Ce
Q 004181 668 IGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQR-GQ 746 (770)
Q Consensus 668 vGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~-g~ 746 (770)
-|.++..+-...... ....+..++++|++ ..++.++++++++.+|+++|.+++.+.+||+|+ + ++
T Consensus 16 ~g~l~~~e~~~i~~~-----l~l~~~~v~diM~~----~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-----~~~~ 81 (173)
T 3ocm_A 16 VPAFGVEERNMVSGV-----LTLAERSIRSIMTP----RTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRG-----SLDE 81 (173)
T ss_dssp --CCCHHHHHHHHHH-----HHHTTSCSTTTSEE----GGGCCCEETTSCHHHHHHHHHHSSCSEEEEESS-----STTS
T ss_pred cCCcCHHHHHHHHHH-----hccCCCCHHHhCCc----HHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeC-----CCCC
Confidence 366775554322211 12456789999974 125788999999999999999999999999986 5 89
Q ss_pred EEEEEeHHHHHHHHHH
Q 004181 747 LVGLLDRESIILACRA 762 (770)
Q Consensus 747 lvGIIT~~DIl~~~~~ 762 (770)
++|+||.+|+++...+
T Consensus 82 lvGivt~~Dl~~~~~~ 97 (173)
T 3ocm_A 82 VVGIGRAKDLVADLIT 97 (173)
T ss_dssp EEEEEEHHHHHHHHHH
T ss_pred EEEEEEHHHHHHHHhc
Confidence 9999999999988654
No 113
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=97.90 E-value=2.3e-05 Score=74.08 Aligned_cols=59 Identities=17% Similarity=0.265 Sum_probs=54.5
Q ss_pred ccccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 621 l~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
....+++++|.+++.++++++++.++++.|.+++. +||+|++|+++|+||.+|+.+.+.
T Consensus 80 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~ 138 (157)
T 2emq_A 80 LETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLN 138 (157)
T ss_dssp GGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHH
T ss_pred hcCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHH
Confidence 34678999999999999999999999999999876 999998999999999999998875
No 114
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.89 E-value=6.9e-05 Score=85.27 Aligned_cols=104 Identities=20% Similarity=0.267 Sum_probs=77.4
Q ss_pred ccccccccccc-ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhccccccccccccc
Q 004181 622 RRVFVSEVMRT-RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCS 700 (770)
Q Consensus 622 ~~i~V~diM~~-~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~ 700 (770)
.+.+++++|++ +++++++++++.|+++.|.+++.+.+||+|++|+++|+||.+|+.+.+.... ...|.+.
T Consensus 173 ~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~---------a~~D~~~ 243 (511)
T 3usb_A 173 YSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPN---------SAKDKQG 243 (511)
T ss_dssp SSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTT---------CCBCTTS
T ss_pred CCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhccc---------chhhhcc
Confidence 45789999998 9999999999999999999999999999999999999999999998875211 1223332
Q ss_pred cCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEec
Q 004181 701 ADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVME 738 (770)
Q Consensus 701 ~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~ 738 (770)
+ ......+.......+..+.+.+.+.+.+.|-..
T Consensus 244 r----l~V~aavg~~~d~~era~aLveaGvd~I~Id~a 277 (511)
T 3usb_A 244 R----LLVGAAVGVTADAMTRIDALVKASVDAIVLDTA 277 (511)
T ss_dssp C----BCCEEEECSSTTHHHHHHHHHHTTCSEEEEECS
T ss_pred c----eeeeeeeeeccchHHHHHHHHhhccceEEeccc
Confidence 2 001123443444455566777889988766543
No 115
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=97.89 E-value=2.3e-05 Score=73.63 Aligned_cols=60 Identities=12% Similarity=0.136 Sum_probs=52.9
Q ss_pred cccccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHH
Q 004181 693 LLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (770)
Q Consensus 693 ~~V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~ 761 (770)
.+++|+|.+ ..++.++++++++.+|++.|.+++.+.+||+|+ +|+++|+||.+|+.+.+.
T Consensus 28 ~~v~dim~~----~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~~~ 87 (149)
T 3k2v_A 28 LRVNDIMHT----GDEIPHVGLQATLRDALLEITRKNLGMTAICDD-----DMNIIGIFTDGDLRRVFD 87 (149)
T ss_dssp SBGGGTSBC----GGGSCEECTTCBHHHHHHHHHHHTSSEEEEECT-----TCBEEEEEEHHHHHHHHC
T ss_pred cCHHHHhcC----CCCCeEECCCCcHHHHHHHHHhCCCcEEEEECC-----CCcEEEEecHHHHHHHHh
Confidence 478999975 124789999999999999999999999999997 799999999999998753
No 116
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=97.87 E-value=1.5e-05 Score=75.33 Aligned_cols=62 Identities=18% Similarity=0.143 Sum_probs=53.8
Q ss_pred ccccccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHHH
Q 004181 692 KLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRA 762 (770)
Q Consensus 692 ~~~V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~~ 762 (770)
...++|+|++ .+++.++++++++.+|.+.|.+++.+.+||+|+ +|+++|+||.+|+++...+
T Consensus 14 ~~~v~dim~p----~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-----~~~~~Giit~~dl~~~~~~ 75 (156)
T 3ctu_A 14 LGQEETFLTP----AKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD-----EKQFVGTIGLRDIMAYQME 75 (156)
T ss_dssp HTTGGGGEEE----GGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC------CBEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHcCc----ccCceEECCCCCHHHHHHHHHHCCCceEeEECC-----CCEEEEEEcHHHHHHHHHh
Confidence 4568999984 226789999999999999999999999999997 7999999999999988754
No 117
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=97.87 E-value=1.4e-05 Score=76.51 Aligned_cols=60 Identities=17% Similarity=0.211 Sum_probs=56.0
Q ss_pred ccccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 621 l~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
....+++++|.+++.++++++++.++++.|.+++.+.+||+|+ |+++|+||.+|+.+.+.
T Consensus 90 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~ 149 (165)
T 3fhm_A 90 SLQQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARI 149 (165)
T ss_dssp GGTSBGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTT
T ss_pred cccCCHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 4467899999999999999999999999999999999999998 99999999999998764
No 118
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=97.86 E-value=1.5e-05 Score=73.15 Aligned_cols=58 Identities=19% Similarity=0.236 Sum_probs=53.9
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHH
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFS 680 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l 680 (770)
...+++++|.+++.++++++++.++++.|.+++.+.+||+|+ |+++|+||.+|+.+.+
T Consensus 72 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 72 NTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHL 129 (133)
T ss_dssp TTSBHHHHHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTC
T ss_pred cccCHHHHhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 357899999999999999999999999999999999999997 9999999999998754
No 119
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.84 E-value=2.5e-05 Score=75.95 Aligned_cols=61 Identities=11% Similarity=0.119 Sum_probs=56.5
Q ss_pred ccccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHH
Q 004181 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (770)
Q Consensus 621 l~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~ 682 (770)
....+++++|.+++.++++++++.++++.|.+++.+.+||+| +|+++|+||.+|+.+.+..
T Consensus 105 ~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~ 165 (185)
T 2j9l_A 105 PPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQ 165 (185)
T ss_dssp CCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred ccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 345789999999999999999999999999999999999999 8999999999999998764
No 120
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=97.83 E-value=2e-05 Score=77.00 Aligned_cols=60 Identities=18% Similarity=0.252 Sum_probs=55.7
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
...+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 73 ~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 73 DEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp GGSBGGGTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSC
T ss_pred ccCCHHHHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 457899999999999999999999999999999999999998899999999999987653
No 121
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.80 E-value=4.8e-06 Score=94.79 Aligned_cols=100 Identities=17% Similarity=0.132 Sum_probs=19.3
Q ss_pred cccccccccccc--eeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhcccccccccccc
Q 004181 622 RRVFVSEVMRTR--YVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMC 699 (770)
Q Consensus 622 ~~i~V~diM~~~--~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim 699 (770)
.+.+|+++|+++ ++++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+.+..... ..|.+
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~~~---------~~d~~ 229 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHNE---------LVDSQ 229 (503)
T ss_dssp ---------------------------------------------------------------CCC---------CBCTT
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcccc---------hhccc
Confidence 456899999987 9999999999999999999999999999999999999999999987642111 11211
Q ss_pred ccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEE
Q 004181 700 SADGETCCVPCTATPNMNLLSALILMDRYGVNQVPV 735 (770)
Q Consensus 700 ~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpV 735 (770)
.+ . .....+.. .+..+..+.+.+.+.+.+.|
T Consensus 230 ~~--l--~v~a~v~~-~~~~e~~~~l~e~gv~~l~V 260 (503)
T 1me8_A 230 KR--Y--LVGAGINT-RDFRERVPALVEAGADVLCI 260 (503)
T ss_dssp SC--B--CCEEEECS-SSHHHHHHHHHHHTCSEEEE
T ss_pred cc--c--ccccccCc-hhHHHHHHHHHhhhccceEE
Confidence 11 0 01124455 55666688888889987655
No 122
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=97.78 E-value=2.6e-05 Score=74.06 Aligned_cols=59 Identities=12% Similarity=0.225 Sum_probs=54.1
Q ss_pred ccccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 621 l~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
....+++++|.+++.++++++++.++++.|.+++. +||+|++|+++|+||.+|+.+.+.
T Consensus 83 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~ 141 (159)
T 1yav_A 83 LDQITVEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELN 141 (159)
T ss_dssp TTTSBHHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHH
T ss_pred hccCCHHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHH
Confidence 34678999999999999999999999999998876 999999999999999999998875
No 123
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=97.75 E-value=3.3e-05 Score=73.33 Aligned_cols=63 Identities=19% Similarity=0.283 Sum_probs=54.6
Q ss_pred ccccccccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHHH
Q 004181 690 SKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (770)
Q Consensus 690 ~~~~~V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl~~~~ 761 (770)
..+..++|+|.+ ++.++++++++.+|++.|.+++.+.+||+|++ ++|+++|+||.+|+.+...
T Consensus 10 ~~~~~v~dim~~------~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~---~~~~~~Givt~~dl~~~~~ 72 (164)
T 2pfi_A 10 SHHVRVEHFMNH------SITTLAKDTPLEEVVKVVTSTDVTEYPLVEST---ESQILVGIVQRAQLVQALQ 72 (164)
T ss_dssp CCSCBHHHHCBC------CCCCEETTCBHHHHHHHHHTCCCSEEEEESCT---TTCBEEEEEEHHHHHHHHH
T ss_pred ccCCCHHHHcCC------CCeEECCCCcHHHHHHHHHhCCCCceeEEecC---CCCEEEEEEEHHHHHHHHH
Confidence 345778999988 78899999999999999999999999999841 0589999999999998763
No 124
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.74 E-value=3.6e-05 Score=81.04 Aligned_cols=61 Identities=15% Similarity=0.254 Sum_probs=57.2
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHH
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~ 682 (770)
...+++++|.++++++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+..
T Consensus 199 ~~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 199 DDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp TTSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred CCCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 4578999999999999999999999999999999999999999999999999999988764
No 125
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.72 E-value=3.3e-05 Score=80.96 Aligned_cols=60 Identities=27% Similarity=0.329 Sum_probs=56.0
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
...+++++|.++++++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 197 ~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 197 PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp TTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC-
T ss_pred CCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999998764
No 126
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.66 E-value=6.4e-05 Score=84.86 Aligned_cols=61 Identities=26% Similarity=0.312 Sum_probs=57.5
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHH
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~ 682 (770)
.+.+++++|++++.++++++++.++++.|.+++...+||+|++|+++|+||.+|+.+.+.+
T Consensus 217 ~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 217 PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp TTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHH
Confidence 4678999999999999999999999999999999999999999999999999999988764
No 127
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.50 E-value=0.0001 Score=84.49 Aligned_cols=63 Identities=24% Similarity=0.383 Sum_probs=56.5
Q ss_pred ccccccccccccCCCCccCCeEeCCC-CCHHHHHHHHHhcCCCEeEEEe-ccCCCCCCeEEEEEeHHHHHHHHHHH
Q 004181 690 SKKLLVSEMCSADGETCCVPCTATPN-MNLLSALILMDRYGVNQVPVVM-EHIPGQRGQLVGLLDRESIILACRAL 763 (770)
Q Consensus 690 ~~~~~V~dim~~~~~~~~~~~~V~~d-~sL~eal~~m~~~~~~~lpVVd-~~~~~~~g~lvGIIT~~DIl~~~~~~ 763 (770)
..+.+|+|+|++ ++.+++++ +++.+++++|.+++++++||+| + +++++|+||.+||++.+.+.
T Consensus 381 l~~~~V~diM~~------~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~-----~g~lvGiVt~~Dll~~l~~~ 445 (527)
T 3pc3_A 381 WWSLAIAELELP------APPVILKSDATVGEAIALMKKHRVDQLPVVDQD-----DGSVLGVVGQETLITQIVSM 445 (527)
T ss_dssp TTTSBGGGGCCC------CCSCCEETTCBHHHHHHHHHHHTCSEEEEECTT-----TCCEEEEEEHHHHHHHHHHH
T ss_pred ccCCcHHHhCcC------CCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECC-----CCEEEEEEEHHHHHHHHHhc
Confidence 346789999988 78899999 9999999999999999999999 5 78999999999999887543
No 128
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.36 E-value=0.00076 Score=76.47 Aligned_cols=60 Identities=30% Similarity=0.318 Sum_probs=56.5
Q ss_pred ccccccccccc-ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 622 RRVFVSEVMRT-RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 622 ~~i~V~diM~~-~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
.+.+++++|++ +++++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+.+.
T Consensus 150 ~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 150 YNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp SSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHh
Confidence 45789999998 8999999999999999999999999999999999999999999998875
No 129
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.30 E-value=6.1e-05 Score=85.37 Aligned_cols=100 Identities=27% Similarity=0.380 Sum_probs=17.4
Q ss_pred cccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHHHHhhhhcccccccccccccc
Q 004181 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSA 701 (770)
Q Consensus 622 ~~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dim~~ 701 (770)
.+.+++++|++++.++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+...... ..++.+..
T Consensus 148 ~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~~~~---------~~~~~~g~ 218 (486)
T 2cu0_A 148 EGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKKYKN---------AVRDENGE 218 (486)
T ss_dssp -----------------------------------------------------------CCTT---------CCBCTTSC
T ss_pred CCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhhccc---------cccccCCc
Confidence 356899999999999999999999999999999999999999999999999999998753110 11111111
Q ss_pred CCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEe
Q 004181 702 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVM 737 (770)
Q Consensus 702 ~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd 737 (770)
.. ....+..++ .+....+.+.+.+.+ |+|
T Consensus 219 --~~--v~~~~~~~~--~~~a~~l~~~gvd~l-vvd 247 (486)
T 2cu0_A 219 --LL--VAAAVSPFD--IKRAIELDKAGVDVI-VVD 247 (486)
T ss_dssp --BC--CEEEECTTC--HHHHHHHHHTTCSEE-EEE
T ss_pred --ee--ecceechhh--HHHHHHHHHhcCCce-EEE
Confidence 00 011233444 455677888888876 565
No 130
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.19 E-value=0.00012 Score=81.75 Aligned_cols=58 Identities=26% Similarity=0.241 Sum_probs=0.0
Q ss_pred ccccccccccceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHH
Q 004181 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFS 680 (770)
Q Consensus 623 ~i~V~diM~~~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l 680 (770)
+.+|+++|++++++++++.+++||.++|.+++...+||||++++++|+||.+|+.+..
T Consensus 199 ~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 199 ETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQ 256 (556)
T ss_dssp ----------------------------------------------------------
T ss_pred ceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhh
Confidence 4689999999999999999999999999999999999999999999999999998764
No 131
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.18 E-value=0.00018 Score=81.43 Aligned_cols=60 Identities=27% Similarity=0.294 Sum_probs=0.0
Q ss_pred cccccccccc-c-ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 622 RRVFVSEVMR-T-RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 622 ~~i~V~diM~-~-~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
.+.+++++|+ + +++++++++++.|+++.|.+++.+.+||+|++++++|+||.+|+.+...
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp --------------------------------------------------------------
T ss_pred cCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 4568999999 4 6999999999999999999999999999999999999999999998754
No 132
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.06 E-value=0.00025 Score=80.46 Aligned_cols=60 Identities=20% Similarity=0.275 Sum_probs=4.6
Q ss_pred ccccccccccc--ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHHH
Q 004181 622 RRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (770)
Q Consensus 622 ~~i~V~diM~~--~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l~ 681 (770)
.+.+++++|++ +++++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+.+.
T Consensus 153 ~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 153 LSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp --------------------------------------------------------CHHHHT
T ss_pred CCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhc
Confidence 35689999998 9999999999999999999999999999999999999999999998764
No 133
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=96.97 E-value=0.0011 Score=75.05 Aligned_cols=52 Identities=23% Similarity=0.386 Sum_probs=46.5
Q ss_pred cccccccCCCCccCCeEeCCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHH
Q 004181 695 VSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESII 757 (770)
Q Consensus 695 V~dim~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd~~~~~~~g~lvGIIT~~DIl 757 (770)
++++|.. ++.++++++++.|+.++|.+++.+.+||+|+ +++++|+||.+|+.
T Consensus 91 ~~~~m~~------d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~-----~~~lvGiVt~rDL~ 142 (496)
T 4fxs_A 91 FEAGVVT------HPVTVRPEQTIADVMELTHYHGFAGFPVVTE-----NNELVGIITGRDVR 142 (496)
T ss_dssp CCC--CB------CCCCBCSSSBHHHHHHHHTSSCCCEEEEECS-----SSBEEEEEEHHHHT
T ss_pred ccccccc------CceEECCCCCHHHHHHHHHHcCCcEEEEEcc-----CCEEEEEEEHHHHh
Confidence 4677776 7899999999999999999999999999997 78999999999996
No 134
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.43 E-value=0.00036 Score=79.61 Aligned_cols=59 Identities=22% Similarity=0.275 Sum_probs=42.5
Q ss_pred ccccccccccc--ceeEEeCCCCHHHHHHHHHhcCCcEEEEeCCCCcEEEEEehHHHHHHH
Q 004181 622 RRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFS 680 (770)
Q Consensus 622 ~~i~V~diM~~--~~~~v~~~~tl~eal~~m~~~~~~~lpVVd~~g~lvGiVt~~dL~~~l 680 (770)
...+++++|++ +++++++++++.++++.|.+++.+.+||||++|+++|+||.+|+.+.+
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNR 231 (514)
T ss_dssp ----------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCC
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHh
Confidence 45689999998 999999999999999999999999999999999999999999998654
Done!