BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004184
(770 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 584 bits (1505), Expect = e-165, Method: Compositional matrix adjust.
Identities = 394/739 (53%), Positives = 488/739 (66%), Gaps = 94/739 (12%)
Query: 47 IAEDVKDGCEGAVTASAVLQMPQEQPQGAMVCWERFLHLRSLKVLLVENDDSTRHVVAAL 106
I DV++G G LQ+P Q A VCWERFLH+R+++VLLVENDD TR++V AL
Sbjct: 43 ITMDVRNGSSGG------LQIPLSQQTAATVCWERFLHVRTIRVLLVENDDCTRYIVTAL 96
Query: 107 LRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPV 165
LRNC YEV EA+NG+QAWK+LEDL NHID+VLTEV MP LSG+ LL KI++HK+R+N+PV
Sbjct: 97 LRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLSGIGLLCKILNHKSRRNIPV 156
Query: 166 I----------IFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESCT-QTQ 214
I +FKCLSKGAVDFLVKPIRKNELK LWQHVWRRC SSSGSGSES T QTQ
Sbjct: 157 IMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVWRRCQSSSGSGSESGTHQTQ 216
Query: 215 KSIKSKNVENSGNNTGSNDEDNNGSIGVNGGDGSDDGSGTQSSWTKKAVEVD-SPRHMSP 273
KS+KSK+++ S ++GS+DE+ NGSIG+N DGS DGSG QSSWTKKAV+VD SPR +S
Sbjct: 217 KSVKSKSIKKSDQDSGSSDENENGSIGLNASDGSSDGSGAQSSWTKKAVDVDDSPRAVSL 276
Query: 274 SDQLAECPDSTCAQVIHSNAEITGSRRVPVTAAKECQDHEERCENFAKRSRDLDVGGQRS 333
D++ DSTCAQV+HSN E ++ V A KE Q+H+++ E+ RDL++ +R+
Sbjct: 277 WDRV----DSTCAQVVHSNPEFPSNQLVAPPAEKETQEHDDKFEDVTM-GRDLEISIRRN 331
Query: 334 LDLQLEYQTESPIKLVGT-KKTNRLDLGSSKLSEQIDRGQLDLNSESPSSKLKYEAAKLA 392
DL LE + E K G ++ N + SSK ++ +G LDL+SESPSSK +E
Sbjct: 332 CDLALEPKDEPLSKTTGIMRQDNSFEKSSSKWKMKVGKGPLDLSSESPSSKQMHEDG--- 388
Query: 393 GAITKIIDSDKEDT-EYEASNKPSKILDINSKSIKDSKELPSLELSLKRLRGVKDIGTTI 451
G+ K + S +D E EA N K LD N S+K S+EL +E S KR RG KD GT +
Sbjct: 389 GSSFKAMSSHLQDNREPEAPNTHLKTLDTNEASVKISEELMHVEHSSKRHRGTKDDGTLV 448
Query: 452 QDDRNVLRRSDSSAFSRYNTASNVNKGPGGNIESAS-QVVNSLEIIKKGSDCGIQSHSNG 510
+DDRNVLRRS+ SAFSRYN ASN NK GGN+ S S Q NS ++IKK ++ HSN
Sbjct: 449 RDDRNVLRRSEGSAFSRYNPASNANKISGGNLGSTSLQDNNSQDLIKK-TEAAYDCHSNM 507
Query: 511 D---PLNQSSNGGSNNMDMGSTT-NNAFIKPAGLKNKSEVSSTVNCLHSSSFQPTKNDLL 566
+ P N S+ GSNN DM STT NNAF KP K S SS+V SSFQP L
Sbjct: 508 NESLPHNHRSHVGSNNFDMSSTTENNAFTKPGAPKVSSAGSSSVK---HSSFQP----LP 560
Query: 567 CSPRQVLLDKRDDLVASSVLVHPRSTQEQLTQHYDN--CHHLVHNMQQQHLPHDHDQLSL 624
C H++N ++LVH +++ LP
Sbjct: 561 C------------------------------DHHNNHASYNLVHVAERKKLP-------- 582
Query: 625 KKMAEAVPQCGSSNMLGGFVEGNAG--NYSINGSASGSNHGSNGQNGSSTAVNAGGMNVE 682
PQCGSSN+ +EGN NYS+NGS SGS HGSNG GSS +NAGGMN+
Sbjct: 583 -------PQCGSSNVYNETIEGNNNTVNYSVNGSVSGSGHGSNGPYGSSNGMNAGGMNMG 635
Query: 683 SDNGIAGKSGSGGASGSGSGSGNR--IDKNKFADREAAVTKYRQKKTERCFRKKVRYQSR 740
SDNG AGK+G+G SGSGSGSG+ D+NK + REAA+TK+RQK+ ERCFRKKVRYQSR
Sbjct: 636 SDNG-AGKNGNGDGSGSGSGSGSGNLADENKISQREAALTKFRQKRKERCFRKKVRYQSR 694
Query: 741 KRLAEQRPRIRGQFVRQTA 759
K+LAEQRPR+RGQFVR+TA
Sbjct: 695 KKLAEQRPRVRGQFVRKTA 713
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 512 bits (1319), Expect = e-144, Method: Compositional matrix adjust.
Identities = 348/726 (47%), Positives = 459/726 (63%), Gaps = 48/726 (6%)
Query: 69 QEQPQGAMVCWERFLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILE 128
Q++ Q +V WERFL +++L+VLLVENDDSTR VV+ALLR C YEV A NGL AW+ LE
Sbjct: 62 QKEHQVRIVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLE 121
Query: 129 DLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVI----------IFKCLSKGAVD 177
DL NHIDLVLTEV MP LSG+ LLSKI SHK K++PVI +FKCLSKGAVD
Sbjct: 122 DLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVD 181
Query: 178 FLVKPIRKNELKNLWQHVWRRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 237
FLVKPIRKNELKNLWQHVWRRCHSSSGSGSES +TQK K K + NN+GSN+++ +
Sbjct: 182 FLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIRTQKCTKPKVDDEYENNSGSNNDNED 241
Query: 238 G----------SIGVNGGDGSDDGSGTQSSWTKKAVEVDSPRHMSPSDQLAECPDSTCAQ 287
S+G N DGSD+GSGTQSSWTK+AVE+DSP+ MSP DQ ++ PDSTCAQ
Sbjct: 242 DDDNDEDDDDLSVGHNARDGSDNGSGTQSSWTKRAVEIDSPQQMSP-DQPSDLPDSTCAQ 300
Query: 288 VIHSNAEITGSRRVPVTAAKECQDHEERCENFAKRSRDLDVGGQRSLDLQLEYQTESP-- 345
VIH +EI +R +P + + H+E N + L++G R + +EYQ+ SP
Sbjct: 301 VIHPTSEICSNRWLPTANKRSGKKHKE--NNDDSMGKYLEIGAPR--NSSMEYQS-SPRE 355
Query: 346 IKLVGTKKTNRLDLGSSKLSEQIDRGQLDLNSESPSSKLKYEAAKLAGAITKIIDSDKED 405
+ + T+K + + SK + + D S + ++ + L +I + D +
Sbjct: 356 MSVNPTEKQHETLMPQSKTTRETD-------SRNTQNEPTTQTVDLISSIARSTDDKQVV 408
Query: 406 TEYEASNKPSKILDINSKSIKDSKELPSLELSLKRLRGVKDIGTTIQDDRNVLRRSDSSA 465
A + SK+ D N K+ ++ S EL LKRL+ T I D+RN+L+RSD SA
Sbjct: 409 RINNAPDCSSKVPDGNDKNRDSLIDMTSEELGLKRLKTTGS-ATEIHDERNILKRSDLSA 467
Query: 466 FSRYNTASNVNKGPGGNIESASQVVNSLEIIKKGSDCGIQSHSNGDPLNQSSNGGSNNMD 525
F+RY+T N+G G S S NS E +K S+C ++S+S+ + Q SNG SNN D
Sbjct: 468 FTRYHTTVASNQGGAGFGGSCSPQDNSSEALKTDSNCKVKSNSDAAEIKQGSNGSSNNND 527
Query: 526 MGSTTNNAFIKPAGLKNKSEVSSTVNCL-HSSSFQPTKNDLLCSPRQVL-LDKRDDLVAS 583
MGS+T NA KP+ + K S V H+S+F P + SP V+ DK D+ +A+
Sbjct: 528 MGSSTKNAITKPSSNRGKVISPSAVKATQHTSAFHPVQRQT--SPANVVGKDKVDEGIAN 585
Query: 584 SVLV-HPRSTQEQLTQHYDNCHHLVHNMQQQHLPHDHDQLSLKKMAEAVPQCGSSNMLGG 642
V V HP Q QH+ + H+ VH M QQ Q S+++ + QCGSSN+
Sbjct: 586 GVNVGHPVDVQNSFMQHHHHVHYYVHVMTQQQ-----QQPSIERGSSDA-QCGSSNVFDP 639
Query: 643 FVEGNAGNYSINGSASGSNHGSNGQNGSSTAVNAGGMNVESDNGIAGKSGSGGASGSGSG 702
+EG+A NYS+NGS SG ++G+NGQ G STA N G N+E+ NGI ++G+GG +GSGSG
Sbjct: 640 PIEGHAANYSVNGSFSGGHNGNNGQRGPSTAPNVGRPNMETVNGIVDENGAGGGNGSGSG 699
Query: 703 SGNRIDKNKFADREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQTANEN 762
SGN + +N REAA+ K+RQK+ R F KKVRYQSRKRLAEQRPRIRGQFVRQ+ E+
Sbjct: 700 SGNDLYQNGVCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQED 759
Query: 763 TSREPE 768
+ + E
Sbjct: 760 QAGQDE 765
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 512 bits (1318), Expect = e-144, Method: Compositional matrix adjust.
Identities = 348/726 (47%), Positives = 459/726 (63%), Gaps = 48/726 (6%)
Query: 69 QEQPQGAMVCWERFLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILE 128
Q++ Q +V WERFL +++L+VLLVENDDSTR VV+ALLR C YEV A NGL AW+ LE
Sbjct: 62 QKEHQVQIVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLE 121
Query: 129 DLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVI----------IFKCLSKGAVD 177
DL NHIDLVLTEV MP LSG+ LLSKI SHK K++PVI +FKCLSKGAVD
Sbjct: 122 DLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVD 181
Query: 178 FLVKPIRKNELKNLWQHVWRRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 237
FLVKPIRKNELKNLWQHVWRRCHSSSGSGSES +TQK K K + NN+GSN+++ +
Sbjct: 182 FLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIRTQKCTKPKVDDEYENNSGSNNDNED 241
Query: 238 G----------SIGVNGGDGSDDGSGTQSSWTKKAVEVDSPRHMSPSDQLAECPDSTCAQ 287
S+G N DGSD+GSGTQSSWTK+AVE+DSP+ MSP DQ ++ PDSTCAQ
Sbjct: 242 DDDNDEDDDDLSVGHNARDGSDNGSGTQSSWTKRAVEIDSPQQMSP-DQPSDLPDSTCAQ 300
Query: 288 VIHSNAEITGSRRVPVTAAKECQDHEERCENFAKRSRDLDVGGQRSLDLQLEYQTESP-- 345
VIH +EI +R +P + + H+E N + L++G R + +EYQ+ SP
Sbjct: 301 VIHPTSEICSNRWLPTANKRSGKKHKE--NNDDSMGKYLEIGAPR--NSSMEYQS-SPRE 355
Query: 346 IKLVGTKKTNRLDLGSSKLSEQIDRGQLDLNSESPSSKLKYEAAKLAGAITKIIDSDKED 405
+ + T+K + + SK + + D S + ++ + L +I + D +
Sbjct: 356 MSVNPTEKQHETLMPQSKTTRETD-------SRNTQNEPTTQTVDLISSIARSTDDKQVV 408
Query: 406 TEYEASNKPSKILDINSKSIKDSKELPSLELSLKRLRGVKDIGTTIQDDRNVLRRSDSSA 465
A + SK+ D N K+ ++ S EL LKRL+ T I D+RN+L+RSD SA
Sbjct: 409 RINNAPDCSSKVPDGNDKNRDSLIDMTSEELGLKRLKTTGS-ATEIHDERNILKRSDLSA 467
Query: 466 FSRYNTASNVNKGPGGNIESASQVVNSLEIIKKGSDCGIQSHSNGDPLNQSSNGGSNNMD 525
F+RY+T N+G G S S NS E +K S+C ++S+S+ + Q SNG SNN D
Sbjct: 468 FTRYHTTVASNQGGAGFGGSCSPQDNSSEALKTDSNCKVKSNSDAAEIKQGSNGSSNNND 527
Query: 526 MGSTTNNAFIKPAGLKNKSEVSSTVNCL-HSSSFQPTKNDLLCSPRQVL-LDKRDDLVAS 583
MGS+T NA KP+ + K S V H+S+F P + SP V+ DK D+ +A+
Sbjct: 528 MGSSTKNAITKPSSNRGKVISPSAVKATQHTSAFHPVQRQT--SPANVVGKDKVDEGIAN 585
Query: 584 SVLV-HPRSTQEQLTQHYDNCHHLVHNMQQQHLPHDHDQLSLKKMAEAVPQCGSSNMLGG 642
V V HP Q QH+ + H+ VH M QQ Q S+++ + QCGSSN+
Sbjct: 586 GVNVGHPVDVQNSFMQHHHHVHYYVHVMTQQQ-----QQPSIERGSSDA-QCGSSNVFDP 639
Query: 643 FVEGNAGNYSINGSASGSNHGSNGQNGSSTAVNAGGMNVESDNGIAGKSGSGGASGSGSG 702
+EG+A NYS+NGS SG ++G+NGQ G STA N G N+E+ NGI ++G+GG +GSGSG
Sbjct: 640 PIEGHAANYSVNGSFSGGHNGNNGQRGPSTAPNVGRPNMETVNGIVDENGAGGGNGSGSG 699
Query: 703 SGNRIDKNKFADREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQTANEN 762
SGN + +N REAA+ K+RQK+ R F KKVRYQSRKRLAEQRPRIRGQFVRQ+ E+
Sbjct: 700 SGNDLYQNGVCYREAALNKFRQKRKVRNFGKKVRYQSRKRLAEQRPRIRGQFVRQSGQED 759
Query: 763 TSREPE 768
+ + E
Sbjct: 760 QAGQDE 765
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 485 bits (1248), Expect = e-136, Method: Compositional matrix adjust.
Identities = 354/720 (49%), Positives = 451/720 (62%), Gaps = 72/720 (10%)
Query: 69 QEQPQGAMVCWERFLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILE 128
Q PQ VCWERF+ +++KVLLV++DDSTR VV+ALLR+C YEV A NG QAW LE
Sbjct: 46 QRPPQ---VCWERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLE 102
Query: 129 DLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVI----------IFKCLSKGAVD 177
D+ N IDLVLTEV MP +SG++LLS+IM+H KN+PVI +FKCLSKGAVD
Sbjct: 103 DMQNSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVD 162
Query: 178 FLVKPIRKNELKNLWQHVWRRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 237
FLVKPIRKNELKNLWQHVWRRCHSSSGSGSES QTQK KSK+ + S NN+GSND+D++
Sbjct: 163 FLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIQTQKCAKSKSGDESNNNSGSNDDDDD 222
Query: 238 GSI--GVNGGDGSDDGSGT--QSSWTKKAVEVDSPRHMSPSDQLAECPDSTCAQVIHSNA 293
+ G+N DGSD+GSGT QSSWTK+AVE+DSP+ MSP DQLA+ PDSTCAQVIH +
Sbjct: 223 DGVIMGLNARDGSDNGSGTQAQSSWTKRAVEIDSPQAMSP-DQLADPPDSTCAQVIHLKS 281
Query: 294 EITGSRRVPVTAAKECQDHEERCENFAKRSRDLDVGGQRSLDLQLEYQTESPIKLVGTKK 353
+I +R +P T+ K + +E ++F + +DL++G R+L+ YQ+ + + K
Sbjct: 282 DICSNRWLPCTSNKNSKKQKETNDDF--KGKDLEIGSPRNLN--TAYQSSPNERSI--KP 335
Query: 354 TNRLDLGSSKLSEQIDRGQLDLNSESPSSKLK------YEAAKLAGAITKIIDSDKEDTE 407
T+R R + L + S + ++ AA L G++ K +D+ +
Sbjct: 336 TDR-------------RNEYPLQNNSKEAAMENLEESSVRAADLIGSMAKNMDAQQAARA 382
Query: 408 YEASNKPSKIL---DINSKSIKDSKELPSLELSLKRLRGVKDIGTTIQDD-RNVLRRSDS 463
A N SK+ D N +I +PSLELSLKR R D IQ++ RNVLRRSD
Sbjct: 383 TNAPNCSSKVPEGKDKNRDNI-----MPSLELSLKRSRSTGDDANAIQEEQRNVLRRSDL 437
Query: 464 SAFSRYNTASNVNKGPGGNIESASQVVNSLEIIKKGSDCGIQSHSNGDPLNQSSNGGSNN 523
SAF+RY+T N+G G + S S N E +K S ++S+S+ P+ Q SNG SNN
Sbjct: 438 SAFTRYHTPVASNQGGTGFVGSCSPHDNISEAMKTDSAYNMKSNSDAAPIKQGSNGSSNN 497
Query: 524 MDMGSTTNNAFIKPAGLKNKSEVSSTVNC-LHSSSFQPTKNDLLCSPRQVLLDKRDDLVA 582
DMGSTT N KP+ K + S V H+S+F P ++ SP ++ D VA
Sbjct: 498 NDMGSTTKNVVTKPSTNKERVMSPSAVKANGHTSAFHPAQH--WTSPANTTGKEKTDEVA 555
Query: 583 SSVL--VHPRSTQEQLTQHYDNCHHLVHNMQQQHLPHDHDQLSLKKMAEAVPQCGSSNML 640
++ P Q L QH H VH +S + PQCGSSN+
Sbjct: 556 NNAAKRAQPGEVQSNLVQHPRPILHYVHF-----------DVSRENGGSGAPQCGSSNVF 604
Query: 641 GGFVEGNAGNYSINGSASGSNHGSNGQNGSSTAVNAGGMNVESDNGIAGKSGSGGASGSG 700
VEG+A NY +NGS SGSN+GSNGQNGS+TAVNA N+E NG KSG GG +GSG
Sbjct: 605 DPPVEGHAANYGVNGSNSGSNNGSNGQNGSTTAVNAERPNMEIANGTINKSGPGGGNGSG 664
Query: 701 SGSGNRIDKNKFADRE---AAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQ 757
SGSGN + +F RE AAV K+RQK+ ER F KKVRYQSRKRLAEQRPR+RGQFVRQ
Sbjct: 665 SGSGNDMYLKRFTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 724
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 483 bits (1242), Expect = e-135, Method: Compositional matrix adjust.
Identities = 355/720 (49%), Positives = 451/720 (62%), Gaps = 72/720 (10%)
Query: 69 QEQPQGAMVCWERFLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILE 128
Q PQ VCWERF+ +++KVLLV++DDSTR VV+ALLR+C YEV A NG QAW LE
Sbjct: 46 QRPPQ---VCWERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLE 102
Query: 129 DLTNHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVI----------IFKCLSKGAVD 177
D+ N IDLVLTEV MP +SG++LLS+IM+H KN+PVI +FKCLSKGAVD
Sbjct: 103 DMQNSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVD 162
Query: 178 FLVKPIRKNELKNLWQHVWRRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 237
FLVKPIRKNELKNLWQHVWRRCHSSSGSGSES QTQK KSK+ + S NN GSND+D++
Sbjct: 163 FLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIQTQKCAKSKSGDESNNNNGSNDDDDD 222
Query: 238 GSI--GVNGGDGSDDGSGT--QSSWTKKAVEVDSPRHMSPSDQLAECPDSTCAQVIHSNA 293
+ G+N DGSD+GSGT QSSWTK+AVE+DSP+ MSP DQLA+ PDSTCAQVIH +
Sbjct: 223 DGVIMGLNARDGSDNGSGTQAQSSWTKRAVEIDSPQAMSP-DQLADPPDSTCAQVIHLKS 281
Query: 294 EITGSRRVPVTAAKECQDHEERCENFAKRSRDLDVGGQRSLDLQLEYQTESPIKLVGTKK 353
+I +R +P T+ K + +E ++F + +DL++G R+L+ YQ+ + + K
Sbjct: 282 DICSNRWLPCTSNKNSKKQKETNDDF--KGKDLEIGSPRNLN--TAYQSSPNERSI--KP 335
Query: 354 TNRLDLGSSKLSEQIDRGQLDLNSESPSSKLK------YEAAKLAGAITKIIDSDKEDTE 407
T+R R + L + S + ++ AA L G++ K +D+ +
Sbjct: 336 TDR-------------RNEYPLQNNSKEAAMENLEESSVRAADLIGSMAKNMDAQQAARA 382
Query: 408 YEASNKPSKIL---DINSKSIKDSKELPSLELSLKRLRGVKDIGTTIQDD-RNVLRRSDS 463
A N SK+ D N +I +PSLELSLKR R D IQ++ RNVLRRSD
Sbjct: 383 ANAPNCSSKVPEGKDKNRDNI-----MPSLELSLKRSRSTGDGANAIQEEQRNVLRRSDL 437
Query: 464 SAFSRYNTASNVNKGPGGNIESASQVVNSLEIIKKGSDCGIQSHSNGDPLNQSSNGGSNN 523
SAF+RY+T N+G G + S S NS E +K S ++S+S+ P+ Q SNG SNN
Sbjct: 438 SAFTRYHTPVASNQGGTGFMGSCSLHDNSSEAMKTDSAYNMKSNSDAAPIKQGSNGSSNN 497
Query: 524 MDMGSTTNNAFIKPAGLKNKSEVSSTVNC-LHSSSFQPTKNDLLCSPRQVLLDKRDDLVA 582
DMGSTT N KP+ K + S V H+S+F P ++ SP ++ D VA
Sbjct: 498 NDMGSTTKNVVTKPSTNKERVMSPSAVKANGHTSAFHPAQH--WTSPANTTGKEKTDEVA 555
Query: 583 SSVL--VHPRSTQEQLTQHYDNCHHLVHNMQQQHLPHDHDQLSLKKMAEAVPQCGSSNML 640
++ P Q L QH H VH +S + PQCGSSN+
Sbjct: 556 NNAAKRAQPGEVQSNLVQHPRPILHYVHF-----------DVSRENGGSGAPQCGSSNVF 604
Query: 641 GGFVEGNAGNYSINGSASGSNHGSNGQNGSSTAVNAGGMNVESDNGIAGKSGSGGASGSG 700
VEG+A NY +NGS SGSN+GSNGQNGS+TAVNA N+E NG KSG GG +GSG
Sbjct: 605 DPPVEGHAANYGVNGSNSGSNNGSNGQNGSTTAVNAERPNMEIANGTINKSGPGGGNGSG 664
Query: 701 SGSGNRIDKNKFADRE---AAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQ 757
SGSGN + +F RE AAV K+RQK+ ER F KKVRYQSRKRLAEQRPR+RGQFVRQ
Sbjct: 665 SGSGNDMYLKRFTQREHRVAAVIKFRQKRKERNFGKKVRYQSRKRLAEQRPRVRGQFVRQ 724
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 259 bits (663), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 198/466 (42%), Positives = 256/466 (54%), Gaps = 96/466 (20%)
Query: 72 PQGAMVCWERFLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLT 131
P +V WER+L +RSLKVLLVENDDSTRH+V ALL+NC YEVT + L+AW+ILED
Sbjct: 48 PLAHVVKWERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEK 107
Query: 132 NHIDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVI----------IFKCLSKGAVDFLV 180
+ IDLVLTEV MP SG LLSKIMSHKT KN+PVI +FKCLS GAVDFLV
Sbjct: 108 SCIDLVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLV 167
Query: 181 KPIRKNELKNLWQHVWRRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNNGSI 240
KPIRKNELKNLWQHVWRRCHSSSGSGSES +KS+K ++ + S N+ +DE N S
Sbjct: 168 KPIRKNELKNLWQHVWRRCHSSSGSGSESGIHDKKSVKPESTQGSENDASISDEHRNES- 226
Query: 241 GVNGG-----DGSDDGSGTQSSWTKKAVEVDSPRHMSPSDQLAECPDSTCAQVIHSNAEI 295
G +GG GSD+GSGTQSSWTK+A + S SPS+Q PD+ + + N
Sbjct: 227 GSSGGLSNQDGGSDNGSGTQSSWTKRASDTKS---TSPSNQF---PDAPNKKGTYENG-- 278
Query: 296 TGSRRVPVTAAKECQDHEERCENFAKRSRDLDVGGQRSLDLQLEYQTESPIKLVGTKKTN 355
V KE +D +E+ +G + + + E P
Sbjct: 279 ----CAHVNRLKEAEDQKEQ------------IGTGSQTGMSMSKKAEEP---------- 312
Query: 356 RLDLGSSKLSEQIDRGQLDLNSESPSSKLKYEAAKLAGAITKIIDSDKEDTEYEASNKPS 415
G L+ N+ KY L + + +DT N+ S
Sbjct: 313 ---------------GDLEKNA-------KYSVQAL--------ERNNDDT----LNRSS 338
Query: 416 KILDINSKSIKDSKE-LPSLELSLKRLRGVKDIGTTIQDDRNVLRRSDSSAFSRYNT-AS 473
+ SK+ ++E L SLE +LK+ R +D DR+VLR S+ SAFS+YN A+
Sbjct: 339 GNSQVESKAPSSNREDLQSLEQTLKKTREDRDYKVG---DRSVLRHSNLSAFSKYNNGAT 395
Query: 474 NVNKGPGGNIESASQVVNSLEIIKKGSDCGIQSHSNGDPLNQSSNG 519
+ K P N+ES S + + + GS S S+ +PL Q S+G
Sbjct: 396 SAKKAPEENVESCSPHDSPIAKL-LGS-----SSSSDNPLKQQSSG 435
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 64/99 (64%), Gaps = 15/99 (15%)
Query: 668 NGSSTAVNAGGMNVES----DNGIAGKSGSGGASGS-----GSGSGNRIDKNKFADREAA 718
NG+++A A NVES D+ IA GS +S + SGS +++A REAA
Sbjct: 392 NGATSAKKAPEENVESCSPHDSPIAKLLGSSSSSDNPLKQQSSGS------DRWAQREAA 445
Query: 719 VTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQ 757
+ K+R K+ ERCF KKVRY SRK+LAEQRP ++GQF+R+
Sbjct: 446 LMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKGQFIRK 484
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 166 bits (421), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 124/203 (61%), Gaps = 23/203 (11%)
Query: 76 MVCWERFLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHID 135
+V WERFL +L+VLLVE DDSTR ++AALLR C Y V +GL+AW++L+ +D
Sbjct: 38 LVKWERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVD 97
Query: 136 LVLTEV-MPCLSGVALLSKIMSHKTRKNLPVI----------IFKCLSKGAVDFLVKPIR 184
L+LTEV +P +SG ALL+ IM H KN+PVI ++KC+ KGA D+LVKP+R
Sbjct: 98 LILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLR 157
Query: 185 KNELKNLWQHVWRRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNNGSIGVNG 244
+NEL+NLWQHVWRR S + +S+ + E + N SN + ++ + NG
Sbjct: 158 RNELRNLWQHVWRR----QTSLAPDSFPWNESVGQQKAEGASAN-NSNGKRDDHVVSGNG 212
Query: 245 GDGSDDGSGTQSSWTKKAVEVDS 267
GD QSS T+ +E +S
Sbjct: 213 GDA-------QSSCTRPEMEGES 228
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 40/44 (90%)
Query: 715 REAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQT 758
REAA+TK+R K+ +RC+ KKVRY+SRK+LAEQRPRI+GQFVRQ
Sbjct: 509 REAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQV 552
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 123/198 (62%), Gaps = 15/198 (7%)
Query: 81 RFLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTE 140
R L ++VLL E DDSTRH++ ALLR CGY V A++G++AW IL++ + +IDLVLTE
Sbjct: 36 RMLPRMPVRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTE 95
Query: 141 V-MPCLSGVALLSKIMSHKTRKNLPVI----------IFKCLSKGAVDFLVKPIRKNELK 189
V +P +SG LLS IM H KN+PVI +FKC+ KGA DFLVKPIRKNEL+
Sbjct: 96 VELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELR 155
Query: 190 NLWQHVWRRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNNGSIGVNGGDGSD 249
NLWQHVWR+ SSG TQ + ++ ++ + +G + +N + + S+
Sbjct: 156 NLWQHVWRK-QLSSGVLDVQHTQQEDNLTERHEQKTGVTKAEHVTEN---VVHKNMECSE 211
Query: 250 DGSGTQSSWTKKAVEVDS 267
S QSS T+ +E DS
Sbjct: 212 QESDAQSSCTRSELEADS 229
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 62/106 (58%), Gaps = 23/106 (21%)
Query: 664 SNGQNGSSTAVNAGGMNVESDNGIAGKSGSGGASGSGSG-------SGNRIDKNK----- 711
+ G++GSST +++ A K+ SG S S S N + +N
Sbjct: 522 TTGESGSSTVLDS-----------ARKTLSGSVCDSSSNHMIAPTESSNVVPENPDGLRH 570
Query: 712 FADREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQ 757
+ REAA+ K+R K+ +RCF KKVRYQSRK LAEQRPR++GQFVRQ
Sbjct: 571 LSQREAALNKFRLKRKDRCFEKKVRYQSRKLLAEQRPRVKGQFVRQ 616
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 99/134 (73%), Gaps = 11/134 (8%)
Query: 76 MVCWERFLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHID 135
+V WE++L L+VLLVE+D STR ++ ALLR C Y+V ++GL AW++L++ +++ID
Sbjct: 25 VVQWEKYLPKTVLRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNID 84
Query: 136 LVLTEV-MPCLSGVALLSKIMSHKTRKNLPVI----------IFKCLSKGAVDFLVKPIR 184
L+LTE+ +P +SG ALL+ +M H+ KN+PVI + KC+ +GA D+L+KP+R
Sbjct: 85 LILTELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMR 144
Query: 185 KNELKNLWQHVWRR 198
KNELKNLWQHVWRR
Sbjct: 145 KNELKNLWQHVWRR 158
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 65/101 (64%), Gaps = 6/101 (5%)
Query: 664 SNGQNGSSTAVNAGGMNVESDNGIAGKSGSGGASGSGSGSGNRIDKNKFADREAAVTKYR 723
SN + +S V AG + ++ GIAG+S S + R +++ REAA+ K+R
Sbjct: 371 SNREKAASKEVEAGSQS--TNEGIAGQSSSTEKPKEEESAKQRWSRSQ---REAALMKFR 425
Query: 724 QKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQTANENTS 764
K+ +RCF KKVRYQSRK+LAEQRPR++GQFVR T N + S
Sbjct: 426 LKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVR-TVNSDAS 465
>sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana
GN=APRR1 PE=1 SV=1
Length = 618
Score = 93.2 bits (230), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 11/128 (8%)
Query: 82 FLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV 141
F+ +++LL +ND ++ V LL C Y+VT + Q L ID++L E+
Sbjct: 13 FIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEI 72
Query: 142 -MPCLSGVALLSKIMSHKTRKNLPVI----------IFKCLSKGAVDFLVKPIRKNELKN 190
+P G+ +L I K + +PVI + KCL GA D+LVKP+R NEL N
Sbjct: 73 DLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLN 132
Query: 191 LWQHVWRR 198
LW H+WRR
Sbjct: 133 LWTHMWRR 140
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 46/61 (75%)
Query: 697 SGSGSGSGNRIDKNKFADREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVR 756
S +G+ N + NK RE A+ K+R+K+ +RCF KK+RY +RKRLAE+RPR++GQFVR
Sbjct: 515 SPAGNPPSNEVRVNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVR 574
Query: 757 Q 757
+
Sbjct: 575 K 575
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 11/128 (8%)
Query: 82 FLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV 141
F+ +++LL ++D S+ V LL NC Y+VT A + Q +L ID++L EV
Sbjct: 22 FVDRSKVRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEV 81
Query: 142 -MPCLSGVALLSKIMSHKTRKNLPVI----------IFKCLSKGAVDFLVKPIRKNELKN 190
+P +L I +K +++P+I + KCL GA ++LVKP+R NEL N
Sbjct: 82 DLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLN 141
Query: 191 LWQHVWRR 198
LW HVWRR
Sbjct: 142 LWTHVWRR 149
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 715 REAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQ 757
R AA+ K+R K+ ERCF KKVRY +RK+LAE RPR+RGQFVRQ
Sbjct: 443 RAAALAKFRLKRKERCFDKKVRYVNRKKLAETRPRVRGQFVRQ 485
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 83.2 bits (204), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 35/170 (20%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLS 146
++VL V++D + ++ +LLR+C Y VT +A ++L + N DLV+++V MP +
Sbjct: 17 MRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPDMD 76
Query: 147 GVALLSKIMSHKTRKNLPVI----------IFKCLSKGAVDFLVKPIRKNELKNLWQHVW 196
G LL + +LPVI + K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 77 GFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHV- 132
Query: 197 RRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNNGSIGVNGGD 246
++S+ +N G+N + D +G+ GV D
Sbjct: 133 --------------------VRSRFDKNRGSNNNGDKRDGSGNEGVGNSD 162
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 14/125 (11%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLS 146
L+VL+V++D + ++ +LR C YEVT+ A +L + D+V+++V MP +
Sbjct: 37 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMD 96
Query: 147 GVALLSKIMSHKTRKNLPVI----------IFKCLSKGAVDFLVKPIRKNELKNLWQHVW 196
G LL + +LPVI + K ++ GAVD+L+KP+R LKN+WQHV
Sbjct: 97 GFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVV 153
Query: 197 RRCHS 201
R+ S
Sbjct: 154 RKRRS 158
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLS 146
L+VL+V++D + ++ +L C Y VT+ A +L N D+V+++V MP +
Sbjct: 28 LRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMD 87
Query: 147 GVALLSKIMSHKTRKNLPVI----------IFKCLSKGAVDFLVKPIRKNELKNLWQHVW 196
G LL + +LPVI + K ++ GAVD+L+KP+R LKN+WQHV
Sbjct: 88 GFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVV 144
Query: 197 RRCH-----SSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDN 236
R+ S GS T + + ++ E++ NN+ S +E N
Sbjct: 145 RKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVNEGN 189
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLS 146
++VL V++D + ++ LL+ C Y VT A ++L + N DLV+++V MP +
Sbjct: 17 MRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPDMD 76
Query: 147 GVALLSKIMSHKTRKNLPVI----------IFKCLSKGAVDFLVKPIRKNELKNLWQHVW 196
G LL + +LPVI + K + GA D+L+KP+R ELKN+WQHV
Sbjct: 77 GFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVV 133
Query: 197 RRCHSSS-----GSGSESCTQTQKSIKSKNVENSGNNTGSNDED 235
R+ +GS +C + + K + E G++++D
Sbjct: 134 RKSKLKKNKSNVSNGSGNCDKANRKRKEQYEEEEEEERGNDNDD 177
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 13/122 (10%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLS 146
L++L+V++D S ++ +L Y+VT + A IL + + DLVL++V MP ++
Sbjct: 11 LRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMN 70
Query: 147 GVALLSKIMSHKTRKNLPVIIFKC----------LSKGAVDFLVKPIRKNELKNLWQHVW 196
G LL ++ +LPVI+ ++ GA D+L+KPIR ELKN+WQHV
Sbjct: 71 GYNLLQQV--GLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVV 128
Query: 197 RR 198
RR
Sbjct: 129 RR 130
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 14/122 (11%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLS 146
L+VL+V++D + ++ +L+ C YEVT +A ++L + + D+V+++V MP +
Sbjct: 11 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMD 70
Query: 147 GVALLSKIMSHKTRKNLPVI----------IFKCLSKGAVDFLVKPIRKNELKNLWQHVW 196
G LL + +LPVI + K + GA D+L+KPIR ELK +WQHV
Sbjct: 71 GFKLLEHV---GLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 197 RR 198
R+
Sbjct: 128 RK 129
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTE-VMPCLS 146
L+VL++++D S V+ LL C Y+VT N +A + D +DLV+++ P
Sbjct: 11 LRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTED 70
Query: 147 GVALLSKIMSHKTRKNLPVIIF----------KCLSKGAVDFLVKPIRKNELKNLWQHVW 196
G+ +L ++ S + +P +I K ++ GA DFL+KP+R EL N+WQH++
Sbjct: 71 GLLILQEVTS---KFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIF 127
Query: 197 RR 198
R+
Sbjct: 128 RK 129
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTE-VMPCLS 146
L+VL++++D S V+ LL C Y+VT N +A + D +DLV+++ P
Sbjct: 11 LRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTED 70
Query: 147 GVALLSKIMSHKTRKNLPVIIF----------KCLSKGAVDFLVKPIRKNELKNLWQHVW 196
G+ +L ++ S + +P +I K ++ GA DFL+KP+R EL N+WQH++
Sbjct: 71 GLLILQEVTS---KFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIF 127
Query: 197 RR 198
R+
Sbjct: 128 RK 129
>sp|Q23917|PDE2_DICDI 3',5'-cyclic-nucleotide phosphodiesterase regA OS=Dictyostelium
discoideum GN=regA PE=1 SV=1
Length = 793
Score = 70.5 bits (171), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 16/127 (12%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLS 146
+++L+ ++DD R ++ LL+ Y VT NG AW+ + DLVLT+V MP ++
Sbjct: 160 VRILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYINKGQQKYDLVLTDVMMPHIT 219
Query: 147 GVALLSKIMSHKTRKNLPVIIFK-----------CLSKGAVDFLVKPIRKNELK----NL 191
G LL +I H +++PVI+ + G DFL KPI K LK +
Sbjct: 220 GFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQDFLTKPIAKELLKKKIDTV 279
Query: 192 WQHVWRR 198
Q +W+R
Sbjct: 280 LQSIWQR 286
>sp|O50055|COL1_ARATH Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1
PE=1 SV=1
Length = 355
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 15/126 (11%)
Query: 641 GGFVEGNAGNYSINGSASGSNHGSNGQNGSSTAVNAGGMNVESDNGIAGKSGSGGASGSG 700
G + E SIN + G+ SNG S VN M D G+ +S + A+ S
Sbjct: 209 GMYQEQQNFQLSINCGSWGALRSSNG--SLSHMVNVSSM----DLGVVPESTTSDATVSN 262
Query: 701 SGSGNRI-DKNKFA--------DREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIR 751
S + D+ + DREA V +YR+KK R F K +RY SRK AE+RPRI+
Sbjct: 263 PRSPKAVTDQPPYPPAQMLSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIK 322
Query: 752 GQFVRQ 757
G+F ++
Sbjct: 323 GRFAKK 328
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 17/136 (12%)
Query: 80 ERFLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLT 139
E FL +S +VLLV D ++ + L+ Y+VT+ +G +A L + IDLV+
Sbjct: 34 EEFL-TKSNRVLLVGADSNSS--LKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIW 90
Query: 140 EV-MPCLSGVALLS----------KIMSHKTRKNLPVIIFKCLSKGAVDFLVKPIRKNEL 188
+ MP ++G+ L+ IMSH+ +K + + + GA DFLVKP+ K +
Sbjct: 91 DFHMPDINGLDALNIIGKQMDLPVVIMSHEYKKE---TVMESIKYGACDFLVKPVSKEVI 147
Query: 189 KNLWQHVWRRCHSSSG 204
LW+HV+R+ S SG
Sbjct: 148 AVLWRHVYRKRMSKSG 163
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 21/182 (11%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLS 146
++VL V+++ + + LL C Y VT+ +A ++L + +N DLV+++V MP
Sbjct: 18 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 77
Query: 147 GVALLSKIMSHKTRKNLPVI----------IFKCLSKGAVDFLVKPIRKNELKNLWQHVW 196
G LL + +LPVI + K + GA D+LVKP+ EL+N+W HV
Sbjct: 78 GFKLLEIGL----EMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVV 133
Query: 197 R---RCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNNGSIGVNGGDGSDDGSG 253
+ + ++ SES + S K K + N++G D+ + G + DGSG
Sbjct: 134 KKNIKSYAKLLPPSESDSVPSASRKRK---DKVNDSGDEDDSDREEDDGEGSEQDGDGSG 190
Query: 254 TQ 255
T+
Sbjct: 191 TR 192
>sp|Q9FHH8|COL5_ARATH Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5
PE=2 SV=2
Length = 355
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 714 DREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQTANEN 762
DREA V +YR+K+ R F K +RY SRK AE RPRI+G+F ++T EN
Sbjct: 284 DREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETEN 332
>sp|Q9C9A9|COL7_ARATH Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana GN=COL7
PE=2 SV=1
Length = 392
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 661 NHGSNGQNGSSTAVNAGGMNVESDNGIAGKSGSGGASGSGSGSGNRIDKNKFADREAAVT 720
NHGS + G GG N + + G + GS + R +REA V
Sbjct: 292 NHGSPWKTGIKPECMLGG-NTCLPHVVGGYEKLMSSDGSVTRQQGRDGGGSDGEREARVL 350
Query: 721 KYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQTA 759
+Y++K+ R F KK+RY+ RK AEQRPRI+G+FV++T+
Sbjct: 351 RYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRTS 389
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 83/169 (49%), Gaps = 14/169 (8%)
Query: 90 VLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLSGV 148
VL+V+ + +T + +++ Y+V+ T+ +A L + I++V+ + MP + G+
Sbjct: 36 VLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFHMPGIDGL 95
Query: 149 ALLSKIMSHKTRKNLPVIIF----------KCLSKGAVDFLVKPIRKNELKNLWQHVWRR 198
L I S + +LPV+I K GA D++VKP+++ + N+WQH+ R+
Sbjct: 96 QALKSITS---KLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQHIVRK 152
Query: 199 CHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNNGSIGVNGGDG 247
+ + S + V++ T D D+ SI +NGG+G
Sbjct: 153 RLIFKPDVAPPKPRMTWSEVFQPVQSHLVPTDGLDRDHFDSITINGGNG 201
>sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4
PE=2 SV=2
Length = 362
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 694 GGASGSGSGSGN-RIDKNKFADREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRG 752
GG + SG+ G R A+REA V +YR+K+ R F K +RY SRK AE RPRI+G
Sbjct: 273 GGPATSGADPGTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKG 332
Query: 753 QFVRQT 758
+F ++T
Sbjct: 333 RFAKRT 338
>sp|Q9LU68|CIA2_ARATH Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana
GN=CIA2 PE=2 SV=1
Length = 435
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 715 REAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQTANENT 763
REA+V +Y++K+ R F KK+RYQ RK A+QRPR++G+FVR+ NE+T
Sbjct: 383 REASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRR-PNEST 430
>sp|O82798|ARR4_ARATH Two-component response regulator ARR4 OS=Arabidopsis thaliana
GN=ARR4 PE=1 SV=1
Length = 259
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 22/143 (15%)
Query: 83 LHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNH--------- 133
L L + VL V++ R V+ LLR +VT +G +A + L L N
Sbjct: 29 LDLDEVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFL-GLDNEKASAEFDRL 87
Query: 134 -IDLVLTEV-MPCLSGVALLSKIMSHKTRKNLPVIIF----------KCLSKGAVDFLVK 181
+DL++T+ MP ++G LL KI + +PV+I +CL +GA DFL+K
Sbjct: 88 KVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLK 147
Query: 182 PIRKNELKNLWQHVWRRCHSSSG 204
P++ ++K L H+ + S+G
Sbjct: 148 PVKLADVKRLRSHLTKDVKLSNG 170
>sp|Q9SK53|COL3_ARATH Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3
PE=1 SV=1
Length = 294
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 693 SGGASGSGSGSGNRIDKNKFADREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRG 752
SGG + + + + A+REA V +YR+K+ R F K +RY SRK AE RPRI+G
Sbjct: 207 SGGVTAEMTNTETPAVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKG 266
Query: 753 QFVRQT 758
+F ++T
Sbjct: 267 RFAKRT 272
>sp|Q9FDX8|HD1_ORYSJ Zinc finger protein HD1 OS=Oryza sativa subsp. japonica GN=HD1 PE=2
SV=1
Length = 395
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 714 DREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQT 758
DREA V +YR+KK R F K +RY++RK AE RPRI+G+F +++
Sbjct: 325 DREARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRS 369
>sp|Q8RWD0|COL16_ARATH Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana
GN=COL16 PE=2 SV=2
Length = 417
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 653 INGSASGSNHGSNGQNGSSTAVNAGGMNVESDNGIAGKSGSGGASGSGSGSGNRIDKNKF 712
+N + S G G SS M++ + G ++ G + + F
Sbjct: 297 LNYDSVISTWGGQGPPWSSGEPPERDMDISGWPAFSMVENGGESTHQKQYVGGCLPSSGF 356
Query: 713 AD--REAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQ 757
D REA V++YR+K+ R F KK+RY+ RK AE+RPR++G+FV++
Sbjct: 357 GDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 403
>sp|Q8LG76|COL6_ARATH Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana GN=COL6
PE=2 SV=2
Length = 406
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 37/45 (82%)
Query: 715 REAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQTA 759
REA V++YR+K+ R F KK+RY+ RK AE+RPR++G+FV++++
Sbjct: 357 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRSS 401
>sp|Q9ZWS7|ARR7_ARATH Two-component response regulator ARR7 OS=Arabidopsis thaliana
GN=ARR7 PE=1 SV=1
Length = 206
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 24/132 (18%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKIL-----------EDLTNHIDL 136
L VL V++ R V+ LLR +VT +G +A + L +DL ++L
Sbjct: 24 LHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGLDGGKGASNLKDL--KVNL 81
Query: 137 VLTEV-MPCLSGVALLSKIMSHKTRKNLPVIIF----------KCLSKGAVDFLVKPIRK 185
++T+ MP LSG LL KI + +PV+I +CL +GA +FL+KP++
Sbjct: 82 IVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEEFLLKPVKL 141
Query: 186 NELKNLWQHVWR 197
++K + Q + R
Sbjct: 142 ADVKRIKQLIMR 153
>sp|Q96502|COL2_ARATH Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2
PE=1 SV=1
Length = 347
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 714 DREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQ 757
+REA V +YR+KK R F K +RY SRK AE RPRI+G+F ++
Sbjct: 277 EREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKR 320
>sp|Q9KLK7|LUXQ_VIBCH Autoinducer 2 sensor kinase/phosphatase LuxQ OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=luxQ PE=1 SV=1
Length = 857
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 21/135 (15%)
Query: 86 RSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNH-IDLVLTE-VMP 143
++L+VLLVE++ + + A R G +V+ T+GLQA +E+L H DLVL + +P
Sbjct: 728 KTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQA---IEELKIHDYDLVLMDNQLP 784
Query: 144 CLSGVALLSKIMSHKTRKNLPVIIFKC------------LSKGAVDFLVKPIRKNELKNL 191
L GV I K +LPV+++ C GA LVKP+++ L
Sbjct: 785 YLDGVETTRTI---KKVLHLPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKA 841
Query: 192 WQHVWRRCHSSSGSG 206
+H ++ H +G
Sbjct: 842 LEH-FKHHHGQKNAG 855
>sp|Q9TLQ4|YCF27_CYACA Probable transcriptional regulator ycf27 OS=Cyanidium caldarium
GN=ycf27 PE=3 SV=1
Length = 249
Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 16/127 (12%)
Query: 86 RSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPC 144
R +L+V+++++ R ++ L GY V+ A NG +A KI T+ IDL++ +V MP
Sbjct: 10 RQHHLLIVDDENNIRKILQTRLTLLGYSVSTACNGEEALKIFT--THSIDLIILDVMMPK 67
Query: 145 LSGVALLSKIMSHKTRKNLPVIIFKCLSK----------GAVDFLVKPIRKNELKNLWQH 194
L G + +I + ++P+I+ L GA D+++KP EL+ Q
Sbjct: 68 LDGYGVCQEI---RKESDIPIIMLTALEDVLDKVTGLELGADDYVIKPFSPRELEARIQS 124
Query: 195 VWRRCHS 201
+ RR +
Sbjct: 125 ILRRIQT 131
>sp|Q9M9B3|COL8_ARATH Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana GN=COL8
PE=2 SV=2
Length = 319
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 36/46 (78%)
Query: 713 ADREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQT 758
++REA V +YR K+ R F KK+RY+ RK A++RPR++G+FVR++
Sbjct: 269 SEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRS 314
>sp|O23100|APRR8_ARATH Putative two-component response regulator-like APRR8 OS=Arabidopsis
thaliana GN=APRR8 PE=2 SV=2
Length = 367
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 15/129 (11%)
Query: 80 ERFLHLRSLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLT 139
ERF + + VLL+++D + ++ ++R CGY+V T I+ + IDLVL
Sbjct: 8 ERFSN--DICVLLLDSDATCLANLSEMIRKCGYKVVATTRADDLPLIINNKDKKIDLVLA 65
Query: 140 EV-MPCLSGVALLSKIMSHKTRKNLPVI---------IFKCLSKGAVDFLVKPIRKNELK 189
E + ++ LL KI ++ +PV+ I +CL +GA L KP+ +N+ K
Sbjct: 66 EFRLIEMNKYELLEKI---RSICEIPVVVSGAHVKDAIVECLCRGAKLCLEKPLMENDFK 122
Query: 190 NLWQHVWRR 198
LWQ R
Sbjct: 123 ILWQFTVSR 131
>sp|Q39057|CONS_ARATH Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1
SV=1
Length = 373
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 714 DREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQ 757
DREA V +YR+K+ R F K +RY SRK AE RPR+ G+F ++
Sbjct: 305 DREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR 348
>sp|Q06065|ATOC_ECOLI Acetoacetate metabolism regulatory protein AtoC OS=Escherichia coli
(strain K12) GN=atoC PE=3 SV=2
Length = 461
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 15/116 (12%)
Query: 89 KVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEV-MPCLSG 147
++L+V+++D+ R +++ G+E A NG A + D+ H D+VL ++ MP + G
Sbjct: 6 RILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADI--HPDVVLMDIRMPEMDG 63
Query: 148 VALLSKIMSHKTRKNLPVIIF----------KCLSKGAVDFLVKPIRKNELKNLWQ 193
+ L ++ SH+TR PVI+ + L GA D+++KP +EL + Q
Sbjct: 64 IKALKEMRSHETRT--PVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQ 117
>sp|Q7A0U4|SRRA_STAAW Transcriptional regulatory protein SrrA OS=Staphylococcus aureus
(strain MW2) GN=srrA PE=3 SV=1
Length = 241
Score = 53.1 bits (126), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 87 SLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEVMPCLS 146
S ++L+V+++D R ++ L +E+ EA+NG +A+++ + N+ ++L ++P +
Sbjct: 2 SNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAME-NNYACILLDLMLPEMD 60
Query: 147 GVALLSKIMSHKTRKNLPVIIFKC----------LSKGAVDFLVKPIRKNELKNLWQHVW 196
G+ + +K+ H K P+I+ GA D++VKP E+ + +
Sbjct: 61 GIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALL 117
Query: 197 RRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 237
RR S++ SE + K ++N + +++++ N
Sbjct: 118 RRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVN 158
>sp|Q9L524|SRRA_STAAU Transcriptional regulatory protein SrrA OS=Staphylococcus aureus
GN=srrA PE=2 SV=2
Length = 241
Score = 53.1 bits (126), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 87 SLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEVMPCLS 146
S ++L+V+++D R ++ L +E+ EA+NG +A+++ + N+ ++L ++P +
Sbjct: 2 SNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAME-NNYACILLDLMLPEMD 60
Query: 147 GVALLSKIMSHKTRKNLPVIIFKC----------LSKGAVDFLVKPIRKNELKNLWQHVW 196
G+ + +K+ H K P+I+ GA D++VKP E+ + +
Sbjct: 61 GIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALL 117
Query: 197 RRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 237
RR S++ SE + K ++N + +++++ N
Sbjct: 118 RRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVN 158
>sp|Q6G972|SRRA_STAAS Transcriptional regulatory protein SrrA OS=Staphylococcus aureus
(strain MSSA476) GN=srrA PE=3 SV=2
Length = 241
Score = 53.1 bits (126), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 87 SLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEVMPCLS 146
S ++L+V+++D R ++ L +E+ EA+NG +A+++ + N+ ++L ++P +
Sbjct: 2 SNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAME-NNYACILLDLMLPEMD 60
Query: 147 GVALLSKIMSHKTRKNLPVIIFKC----------LSKGAVDFLVKPIRKNELKNLWQHVW 196
G+ + +K+ H K P+I+ GA D++VKP E+ + +
Sbjct: 61 GIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALL 117
Query: 197 RRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 237
RR S++ SE + K ++N + +++++ N
Sbjct: 118 RRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVN 158
>sp|Q6GGK6|SRRA_STAAR Transcriptional regulatory protein SrrA OS=Staphylococcus aureus
(strain MRSA252) GN=srrA PE=3 SV=2
Length = 241
Score = 53.1 bits (126), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 87 SLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEVMPCLS 146
S ++L+V+++D R ++ L +E+ EA+NG +A+++ + N+ ++L ++P +
Sbjct: 2 SNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAME-NNYACILLDLMLPEMD 60
Query: 147 GVALLSKIMSHKTRKNLPVIIFKC----------LSKGAVDFLVKPIRKNELKNLWQHVW 196
G+ + +K+ H K P+I+ GA D++VKP E+ + +
Sbjct: 61 GIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALL 117
Query: 197 RRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 237
RR S++ SE + K ++N + +++++ N
Sbjct: 118 RRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVN 158
>sp|Q7A5H6|SRRA_STAAN Transcriptional regulatory protein SrrA OS=Staphylococcus aureus
(strain N315) GN=srrA PE=1 SV=1
Length = 241
Score = 53.1 bits (126), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 87 SLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEVMPCLS 146
S ++L+V+++D R ++ L +E+ EA+NG +A+++ + N+ ++L ++P +
Sbjct: 2 SNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAME-NNYACILLDLMLPEMD 60
Query: 147 GVALLSKIMSHKTRKNLPVIIFKC----------LSKGAVDFLVKPIRKNELKNLWQHVW 196
G+ + +K+ H K P+I+ GA D++VKP E+ + +
Sbjct: 61 GIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALL 117
Query: 197 RRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 237
RR S++ SE + K ++N + +++++ N
Sbjct: 118 RRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVN 158
>sp|Q7A2R6|SRRA_STAAM Transcriptional regulatory protein SrrA OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=srrA PE=1 SV=1
Length = 241
Score = 53.1 bits (126), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 87 SLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEVMPCLS 146
S ++L+V+++D R ++ L +E+ EA+NG +A+++ + N+ ++L ++P +
Sbjct: 2 SNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAME-NNYACILLDLMLPEMD 60
Query: 147 GVALLSKIMSHKTRKNLPVIIFKC----------LSKGAVDFLVKPIRKNELKNLWQHVW 196
G+ + +K+ H K P+I+ GA D++VKP E+ + +
Sbjct: 61 GIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALL 117
Query: 197 RRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 237
RR S++ SE + K ++N + +++++ N
Sbjct: 118 RRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVN 158
>sp|Q5HFT0|SRRA_STAAC Transcriptional regulatory protein SrrA OS=Staphylococcus aureus
(strain COL) GN=srrA PE=2 SV=1
Length = 241
Score = 53.1 bits (126), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 87 SLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEVMPCLS 146
S ++L+V+++D R ++ L +E+ EA+NG +A+++ + N+ ++L ++P +
Sbjct: 2 SNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAME-NNYACILLDLMLPEMD 60
Query: 147 GVALLSKIMSHKTRKNLPVIIFKC----------LSKGAVDFLVKPIRKNELKNLWQHVW 196
G+ + +K+ H K P+I+ GA D++VKP E+ + +
Sbjct: 61 GIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALL 117
Query: 197 RRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 237
RR S++ SE + K ++N + +++++ N
Sbjct: 118 RRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVN 158
>sp|Q2FY79|SRRA_STAA8 Transcriptional regulatory protein SrrA OS=Staphylococcus aureus
(strain NCTC 8325) GN=srrA PE=3 SV=1
Length = 241
Score = 53.1 bits (126), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 87 SLKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKILEDLTNHIDLVLTEVMPCLS 146
S ++L+V+++D R ++ L +E+ EA+NG +A+++ + N+ ++L ++P +
Sbjct: 2 SNEILIVDDEDRIRRLLKMYLERESFEIHEASNGQEAYELAME-NNYACILLDLMLPEMD 60
Query: 147 GVALLSKIMSHKTRKNLPVIIFKC----------LSKGAVDFLVKPIRKNELKNLWQHVW 196
G+ + +K+ H K P+I+ GA D++VKP E+ + +
Sbjct: 61 GIQVATKLREH---KQTPIIMLTAKGEETNRVEGFESGADDYIVKPFSPREVVLRVKALL 117
Query: 197 RRCHSSSGSGSESCTQTQKSIKSKNVENSGNNTGSNDEDNN 237
RR S++ SE + K ++N + +++++ N
Sbjct: 118 RRTQSTTVEQSEPHARDVIEFKHLEIDNDAHRVLADNQEVN 158
>sp|Q7G8V2|ARR15_ARATH Two-component response regulator ARR15 OS=Arabidopsis thaliana
GN=ARR15 PE=1 SV=1
Length = 206
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 24/139 (17%)
Query: 88 LKVLLVENDDSTRHVVAALLRNCGYEVTEATNGLQAWKIL-----------EDLTNHIDL 136
L VL V++ R V+ LL+ +VT +G +A + L +DL ++L
Sbjct: 18 LHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDL--KVNL 75
Query: 137 VLTEV-MPCLSGVALLSKIMSHKTRKNLPVIIF----------KCLSKGAVDFLVKPIRK 185
++T+ MP L+G LL KI + +PV+I +C+ +GA +FL+KP++
Sbjct: 76 IVTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKL 135
Query: 186 NELKNLWQHVWRRCHSSSG 204
++K L + + R + G
Sbjct: 136 ADVKRLKELIMRGGEAEEG 154
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.127 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 286,717,136
Number of Sequences: 539616
Number of extensions: 12702352
Number of successful extensions: 102002
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 320
Number of HSP's successfully gapped in prelim test: 850
Number of HSP's that attempted gapping in prelim test: 68924
Number of HSP's gapped (non-prelim): 25563
length of query: 770
length of database: 191,569,459
effective HSP length: 125
effective length of query: 645
effective length of database: 124,117,459
effective search space: 80055761055
effective search space used: 80055761055
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 65 (29.6 bits)