Query 004190
Match_columns 770
No_of_seqs 342 out of 1919
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 17:09:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004190.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004190hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3abz_A Beta-glucosidase I; gly 100.0 5E-146 2E-150 1306.7 56.4 632 50-763 3-833 (845)
2 3zyz_A Beta-D-glucoside glucoh 100.0 1E-145 3E-150 1286.9 56.3 637 49-763 12-709 (713)
3 2x41_A Beta-glucosidase; hydro 100.0 4E-144 1E-148 1280.4 51.3 636 51-768 2-717 (721)
4 1x38_A Beta-D-glucan exohydrol 100.0 2E-115 5E-120 1016.8 41.5 521 41-626 4-601 (602)
5 3rrx_A EXO-1,3/1,4-beta-glucan 100.0 4E-115 1E-119 1026.6 42.1 515 48-631 21-619 (822)
6 3bmx_A Uncharacterized lipopro 100.0 5E-103 2E-107 917.1 35.0 497 46-628 28-640 (642)
7 3sql_A Glycosyl hydrolase fami 100.0 3.7E-73 1.3E-77 642.0 27.3 399 109-567 102-523 (535)
8 3tev_A Glycosyl hyrolase, fami 100.0 5.6E-59 1.9E-63 504.4 19.2 252 78-364 70-337 (351)
9 4gvf_A Beta-hexosaminidase; TI 100.0 3.4E-52 1.1E-56 449.9 7.4 249 80-357 54-314 (349)
10 4g6c_A Beta-hexosaminidase 1; 100.0 1.3E-51 4.6E-56 445.6 9.6 251 76-357 59-322 (348)
11 2oxn_A Beta-hexosaminidase; TI 100.0 1.1E-51 3.7E-56 445.5 8.7 245 80-357 54-308 (340)
12 3idu_A Uncharacterized protein 96.8 0.0043 1.5E-07 57.0 8.6 52 667-727 32-84 (127)
13 2l0d_A Cell surface protein; s 95.8 0.029 9.9E-07 50.4 8.4 63 667-751 18-82 (114)
14 2kut_A Uncharacterized protein 95.3 0.013 4.6E-07 53.2 4.2 57 667-727 15-73 (122)
15 3isy_A Bsupi, intracellular pr 90.9 1.2 4E-05 40.3 9.4 70 667-751 17-99 (120)
16 2x3c_A Toxic extracellular end 88.0 0.53 1.8E-05 50.4 5.8 63 668-732 36-116 (343)
17 2e6j_A Hydin protein; PAPD, st 84.7 2.2 7.4E-05 37.3 7.2 62 668-735 26-87 (112)
18 1w8o_A Bacterial sialidase; 3D 83.5 2.1 7.1E-05 49.2 8.2 100 615-752 338-439 (601)
19 1yew_A Particulate methane mon 81.0 3.1 0.00011 44.0 7.5 57 667-727 263-336 (382)
20 2iaa_C Azurin; quinoprotein, t 78.7 3.1 0.00011 37.8 6.0 54 671-726 27-99 (128)
21 4ep8_B Urease subunit beta; al 78.0 3.9 0.00013 35.1 5.8 51 670-724 20-82 (101)
22 1cuo_A Protein (azurin ISO-2); 77.2 3.7 0.00013 37.4 6.0 56 671-726 28-100 (129)
23 4ubp_B Protein (urease (chain 71.6 6.6 0.00022 35.1 5.8 52 669-724 25-88 (126)
24 4ac7_B Urease subunit beta; hy 71.6 6.6 0.00022 35.1 5.8 52 669-724 25-88 (126)
25 2ys4_A Hydrocephalus-inducing 67.8 9.8 0.00033 33.9 6.4 59 668-737 41-99 (122)
26 3fsa_A Azurin; copper, cupredo 67.7 9.7 0.00033 34.4 6.3 55 671-726 28-100 (125)
27 3ay2_A Lipid modified azurin p 66.6 4.8 0.00016 38.4 4.2 15 712-726 125-139 (167)
28 1nwp_A Azurin; electron transp 65.3 11 0.00037 34.2 6.2 64 671-735 28-112 (128)
29 2ccw_A Azurin II, AZN-2; elect 59.0 16 0.00056 33.0 6.2 15 712-726 86-100 (129)
30 3rfr_A PMOB; membrane, oxidore 51.2 26 0.0009 37.5 6.9 56 667-727 297-368 (419)
31 1xf1_A C5A peptidase, SCP; hyd 50.7 13 0.00045 45.0 5.3 59 668-727 499-564 (926)
32 3qga_A UREA2, fusion of urease 47.8 22 0.00074 34.9 5.2 51 670-724 125-187 (225)
33 2aan_A Auracyanin A; cupredoxi 46.5 34 0.0012 30.9 6.3 17 710-726 98-114 (139)
34 1e9y_A Urease subunit alpha; h 43.7 22 0.00077 35.1 4.7 50 671-724 126-187 (238)
35 3kmh_A D-lyxose isomerase; cup 42.6 24 0.00083 35.3 4.8 55 676-736 131-195 (246)
36 2x0j_A Malate dehydrogenase; o 41.6 6.6 0.00023 41.0 0.6 58 473-535 65-124 (294)
37 3qbt_B Inositol polyphosphate 39.6 68 0.0023 29.2 7.2 55 669-727 44-100 (140)
38 3q48_A Chaperone CUPB2; IG fol 36.6 96 0.0033 31.4 8.4 54 671-726 45-102 (257)
39 2qsv_A Uncharacterized protein 35.5 2E+02 0.0067 28.0 10.4 50 669-728 20-70 (220)
40 2cal_A Rusticyanin; iron respi 35.1 72 0.0025 29.5 6.7 20 671-690 70-89 (154)
41 2qsv_A Uncharacterized protein 35.0 66 0.0023 31.5 6.8 52 668-727 134-185 (220)
42 2lv4_A Putative outer membrane 34.8 44 0.0015 29.8 4.7 67 701-767 48-135 (146)
43 4ay0_A Chaperone protein CAF1M 34.7 93 0.0032 30.6 7.8 53 671-727 29-84 (218)
44 3vku_A L-LDH, L-lactate dehydr 34.3 23 0.00078 37.4 3.4 58 473-535 72-131 (326)
45 4dzg_A PLIG; lysozyme inhibito 33.5 50 0.0017 29.1 5.0 43 712-754 35-95 (114)
46 4hci_A Cupredoxin 1; structura 33.0 83 0.0028 26.4 6.2 16 711-726 61-76 (100)
47 1iby_A Nitrosocyanin; RED copp 33.0 55 0.0019 28.1 5.2 40 671-726 47-86 (112)
48 1qhq_A Protein (auracyanin); e 30.1 84 0.0029 28.2 6.2 26 711-752 98-123 (140)
49 4djm_A DRAB; chaperone, PILI; 28.3 1E+02 0.0034 30.9 6.8 52 671-726 39-91 (239)
50 3vta_A Cucumisin; subtilisin-l 28.2 2.9E+02 0.0098 31.5 11.6 79 668-765 537-618 (621)
51 2co7_B SAFB chaperone, putativ 28.0 96 0.0033 30.6 6.5 52 671-726 29-81 (221)
52 4h7p_A Malate dehydrogenase; s 27.0 17 0.00058 38.7 0.8 56 473-534 96-155 (345)
53 4aj2_A L-lactate dehydrogenase 26.7 21 0.00071 37.8 1.4 57 474-535 84-142 (331)
54 1oju_A MDH, malate dehydrogena 26.1 16 0.00055 37.9 0.5 58 473-535 65-124 (294)
55 3ldh_A Lactate dehydrogenase; 25.7 29 0.00099 36.7 2.3 57 474-535 86-144 (330)
56 3hhp_A Malate dehydrogenase; M 25.4 18 0.00063 37.9 0.7 58 473-535 65-124 (312)
57 5mdh_A Malate dehydrogenase; o 25.2 39 0.0013 35.7 3.2 59 473-535 75-135 (333)
58 3hrz_B Cobra venom factor; ser 25.0 1.2E+02 0.0041 30.4 6.8 62 667-732 95-158 (252)
59 3pqe_A L-LDH, L-lactate dehydr 25.0 19 0.00064 38.1 0.7 58 473-535 69-128 (326)
60 3qis_A Inositol polyphosphate 25.0 1.3E+02 0.0046 31.9 7.5 57 668-728 46-104 (366)
61 3tl2_A Malate dehydrogenase; c 24.6 19 0.00064 37.9 0.6 58 473-535 74-133 (315)
62 4hs4_A Chromate reductase; tri 24.1 1.2E+02 0.0041 29.1 6.3 52 467-529 63-119 (199)
63 3nep_X Malate dehydrogenase; h 23.2 18 0.00062 37.9 0.2 58 473-535 65-124 (314)
64 2q3z_A Transglutaminase 2; tra 23.1 90 0.0031 36.2 5.9 58 668-727 487-548 (687)
65 3szu_A ISPH, 4-hydroxy-3-methy 21.2 65 0.0022 33.8 3.9 140 393-566 152-296 (328)
66 3o0l_A Uncharacterized protein 20.8 3.3E+02 0.011 23.7 7.9 59 667-727 37-96 (112)
67 3gvi_A Malate dehydrogenase; N 20.1 30 0.001 36.4 1.1 58 473-535 71-130 (324)
No 1
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=100.00 E-value=4.7e-146 Score=1306.68 Aligned_cols=632 Identities=29% Similarity=0.462 Sum_probs=547.3
Q ss_pred HHHHHHHHhcCCHHHHHHHhcC----CCCCCCCCCCchhhhHhhhhccccccCCCcccCCCCCCCccccccccccccCCH
Q 004190 50 PQRVNDLIGRLSLQEKVKLLIS----GAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNA 125 (770)
Q Consensus 50 ~~rv~~ll~~MTleEKi~ql~~----~~~~~~rlgip~~~~~~~~~~g~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~ 125 (770)
+.|+++||++||||||++||.+ ...+++|+|||.+ ++.|++||+. +.++.+ ..++|.||++++||||||+
T Consensus 3 ~~r~~~ll~~mTleEKi~~l~g~~~~~~~~~~rlgiP~l-~~~D~~~G~~----~~~~~~-~~~~t~fP~~~~laat~d~ 76 (845)
T 3abz_A 3 KFDVEQLLSELNQDEKISLLSAVDFWHTKKIERLGIPAV-RVSDGPNGIR----GTKFFD-GVPSGCFPNGTGLASTFDR 76 (845)
T ss_dssp CCCHHHHHHHCCHHHHHHHTBCSSSSBCCCBGGGTBCCC-BEEECTTSCC----CSCSTT-CCCBCCCCCHHHHHHTCCH
T ss_pred HHHHHHHHHcCCHHHHHHHhcCCCccccccCcccCCCCE-EEEecCCCee----eeeccC-CCCcCcCcCHHHHHhcCCH
Confidence 4689999999999999999986 3567899999998 6789999975 223311 0248999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCcceE-ecccccccCCCCCCccCCCCCCChHHHHHHHHHHHHHhhcCCCCcceeEEee
Q 004190 126 TLWEAIGRVVSDEARAMYNGGTAGLTY-WSPNVNIFRDPRWGRGQETPGEDPVLSGKYAASYVRGLQGSDGDRLKVAASC 204 (770)
Q Consensus 126 ~l~~~~g~~~g~E~ra~~~~g~~G~~~-laP~~dl~r~p~~gr~~e~fgeDP~l~~~~~~a~v~G~Q~~~g~~~~v~a~~ 204 (770)
+|++++|+++|+|+|++ |+|+ |||++||+|||+|||++|+|||||+|+++|+.|+|+|+|+ +| |+||+
T Consensus 77 ~l~~~~g~~~g~E~ra~------Gi~~~laP~vdi~r~P~~gR~~EsfgeDP~lv~~~a~a~v~GlQ~-~g----V~a~~ 145 (845)
T 3abz_A 77 DLLETAGKLMAKESIAK------NAAVILGPTTNMQRGPLGGRGFESFSEDPYLAGMATSSVVKGMQG-EG----IAATV 145 (845)
T ss_dssp HHHHHHHHHHHHHHHHT------TCSEEECCBCCCCSSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHH-TT----CBCEE
T ss_pred HHHHHHHHHHHHHHHHc------CCCEEecceECCCcCCCCCcccccCCCCHHHHHHHHHHHHHHHhh-CC----eeEEe
Confidence 99999999999999999 8898 9999999999999999999999999999999999999999 78 99999
Q ss_pred cccccccCCCCCCCcccccccccCHHHHHhhccHHHHHHHHcCCccEEEecccCCCCcccccCHHHHHHhhhcccccceE
Q 004190 205 KHFTAYDLDNWNGVDRFHFNAKVSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGY 284 (770)
Q Consensus 205 KHFpg~~~~~~~~~~r~~~~~~~~~~~l~e~~l~PF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR~e~Gf~G~ 284 (770)
||||||+++ ..|...++.+++++|+|+||+||++||+++.+++||||||++||+|||.|++||++|||+||||+|+
T Consensus 146 KHFpg~g~e----~~r~~~~~~v~~~~L~e~~L~PF~~ai~~ag~~~VM~syn~ing~pa~~s~~ll~~lLR~e~GF~G~ 221 (845)
T 3abz_A 146 KHFVCNDLE----DQRFSSNSIVSERALREIYLEPFRLAVKHANPVCIMTAYNKVNGEHCSQSKKLLIDILRDEWKWDGM 221 (845)
T ss_dssp EEETTCCCC----TTTTTCEEECCHHHHHHTTSHHHHHHHHHHCCSEEEECSSEETTEEGGGCHHHHTCCCCCCTCCCSE
T ss_pred eccccCCcc----cCCccccCCCCHHHHHHhhHHHHHHHHHhcCCCEEEecCCCcCCEeccCCHHHHHHHHhhccCCCeE
Confidence 999999865 3577778889999999999999999997444679999999999999999999999999999999999
Q ss_pred EEcCchhhccccccccccCChHHHHHHHHHcCCCcCCC-c--chh-HHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHhC-
Q 004190 285 IVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCG-P--FLG-LHTESAVQRGL-LSEIDINNALVNTLTVQMRLG- 358 (770)
Q Consensus 285 VvSD~~~~~~~~~~~~~~~~~~ea~~~al~AG~D~~~~-~--~~~-~~l~~av~~G~-i~~~~ld~av~RiL~~k~~~G- 358 (770)
|||||+++. ++++|++||+||+|+ + ++. +.|.+||++|+ |++++||+||+|||++|+++|
T Consensus 222 VvSD~~~~~--------------~~~~Al~AG~D~~m~~~~~~~~~~~l~~av~~G~~i~~~~id~av~RIL~~k~~~g~ 287 (845)
T 3abz_A 222 LMSDWFGTY--------------TTAAAIKNGLDIEFPGPTRWRTRALVSHSLNSREQITTEDVDDRVRQVLKMIKFVVD 287 (845)
T ss_dssp EECCTTCCC--------------CSHHHHHHTCCBBCSSSCSSCCHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEcccccHH--------------HHHHHHHcCCCcccCCchhhhHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHHhCC
Confidence 999998763 247899999999996 2 223 48999999999 999999999999999999999
Q ss_pred ---CCCCCCCCCCCCCCCCCccCChhhHHHHHHHHhhceeeeccCCCCCCcccCCcceEEEEccCCCCceeecccccc-c
Q 004190 359 ---MFDGEPSSQPYGHLGPKDVCTPDHQELALEAARQGIVLLKNQGPSLPLSHIRHRTVAVIGPNSDVTVTMIGNYAG-I 434 (770)
Q Consensus 359 ---l~~~~p~~~~~~~~~~~~v~~~~h~~la~~aA~esiVLLKN~~~~LPL~~~~~~kIaviG~~a~~~~~~~G~~~g-~ 434 (770)
+|+ +|. .......+++++|+++++++|++|||||||++++|||++ .+||+||||+|+....++|+++. .
T Consensus 288 l~~~~~-~p~----~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~--~~~iaviGp~A~~~~~~Gggs~~~~ 360 (845)
T 3abz_A 288 NLEKTG-IVE----NGPESTSNNTKETSDLLRKIAADSIVLLKNKNNILPLKK--EDNIIVIGPNAKAKTSSGGGSASMN 360 (845)
T ss_dssp THHHHC-CCT----TCCCCCTTCSHHHHHHHHHHHHHHCEEEEECTTCCSCCT--TSCEEEESTTTSCCCCSCBSTTCCC
T ss_pred cccccc-CCc----cCccccccCCHHHHHHHHHHHHhCcEEeccCCcccCCCC--CCEEEEEcCCcchhhccCCCccCcc
Confidence 998 442 222223478999999999999999999999999999986 46999999999988766655544 5
Q ss_pred CCCcCCHHHHHHhhh--eeeeeeccCcc------------------------------------c---------------
Q 004190 435 ACGYTTPLQGIGRYA--RTIHQQGCKDV------------------------------------A--------------- 461 (770)
Q Consensus 435 ~~~~~t~~~gl~~~~--~~~~~~g~~~~------------------------------------~--------------- 461 (770)
+.+.+||++||+++. .+.|.+||... .
T Consensus 361 ~~~~vtpl~gi~~~~~~~v~y~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (845)
T 3abz_A 361 SYYVVSPYEGIVNKLGKEVDYTVGAYSHKSIGGLAESSLIDAAKPADAENSGLIAKFYSNPVEERSDDEEPFHVTKVNRS 440 (845)
T ss_dssp BSCCCCHHHHHHHHHTSCCEEECCCCCCSSCCBSGGGEESSTTSCSCTTTBSEEEEEESSCTTTSCTTCCCSEEEEECSS
T ss_pred cCCcCCHHHHHHHhhcCceeeccccccccccccccccccccccccccCCCCceEEEEeccCcccCcccccceeeeecccc
Confidence 778899999999875 36666555200 0
Q ss_pred --------------------------------------------------------------------------------
Q 004190 462 -------------------------------------------------------------------------------- 461 (770)
Q Consensus 462 -------------------------------------------------------------------------------- 461 (770)
T Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~l~idg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (845)
T 3abz_A 441 NVHLFDFKHEKVDPKNPYFFVTLTGQYVPQEDGDYIFSLQVYGSGLFYLNDELIIDQKHNQERGSFCFGAGTKERTKKLT 520 (845)
T ss_dssp EEECTTCCCTTSBTTBCCCEEEEEEEECCSSSEEEEEEEEEESEEEEEETTEEEEEESSSCCBCSTTTTTSBCCEEEEEE
T ss_pred ceeecccccccccccccceeEEEEEEEecCCCccEEEEEeecCceEEEECCEEEeeccccccccccccccCcccceeEEE
Confidence
Q ss_pred ------------C------------------------Cc-hhhHHHHHHHhhccCEEEEEeCCCccccccccccCCCCCC
Q 004190 462 ------------C------------------------AD-DQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLP 504 (770)
Q Consensus 462 ------------~------------------------~~-~~~~~~a~~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp 504 (770)
. .+ ...+++|+++|++||+|||++|.++..|+||.||.+|.||
T Consensus 521 l~~g~~y~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Av~~A~~ADvvVv~vG~~~~~e~Eg~DR~~l~LP 600 (845)
T 3abz_A 521 LKKGQVYNVRVEYGSGPTSGLVGEFGAGGFQAGVIKAIDDDEEIRNAAELAAKHDKAVLIIGLNGEWETEGYDRENMDLP 600 (845)
T ss_dssp ECTTCCEEEEEEEECTTTSCCSSCCCCCEEEEEEEECCCHHHHHHHHHHHHHTSSEEEEEEECCTTTSBTTBCCSSSCCC
T ss_pred ecCCceeeEEEEeccCCcccccccccccceeecccccccchhhHHHHHHHHhcCCEEEEEEecCCccccccCCcccccCC
Confidence 0 00 1347789999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhhCCCCEEEEEecCCeeeeccccCCCCcceEEeccCCCchhHHHHHHHHcCCCCCCcccccccCCcccc
Q 004190 505 GRQQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYI 584 (770)
Q Consensus 505 ~~q~~li~~v~~~~~~pvIvVl~~g~P~~l~~~~~~~~v~AiL~a~~~G~e~g~AladVL~G~~nPsGkLPvT~~p~~~~ 584 (770)
+.|++||++|+++ ++|||||+++|+|++|+|++ +++|||++||||||+|+||||||||++|||||||+|| |+++
T Consensus 601 ~~Q~~LI~aV~a~-~~~tVVVl~sG~pv~m~w~~---~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkLP~T~-p~~~- 674 (845)
T 3abz_A 601 KRTNELVRAVLKA-NPNTVIVNQSGTPVEFPWLE---DANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLSW-PFKL- 674 (845)
T ss_dssp TTHHHHHHHHHHH-CSCEEEEEECSSCCCCTTGG---GCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCCSSCB-CSSG-
T ss_pred HHHHHHHHHHHHh-CCCEEEEEeCCCcccCcchh---ccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCCceee-eCch-
Confidence 9999999999976 56899999999999999984 7999999999999999999999999999999999999 5664
Q ss_pred CCCCccccC-CCC----CCCCCCCCCcccccC---CCcccccCcCCCCCCceec--ccccCccccccCCCCCCccccccc
Q 004190 585 TNLPMTEMA-MRP----SQSKRYPGRTYRFYK---GPVVYPFGHGMSYTNFVHT--VANAPTVVAVPLDGRHGSINATIS 654 (770)
Q Consensus 585 ~~~p~~~~~-~~~----~~~~~~~g~~Yr~~~---~~~lypFG~GLSYTtF~ys--~~~~~~~~~~~~~~~~~~~~~~~~ 654 (770)
+|+|.++.. ... +.+..|. +||||+ .+|+||||||||||||+|+ ++++.
T Consensus 675 ~d~P~~~~~~~~~g~~~y~eg~~v--gYR~y~~~~~~plfPFG~GLSYTtF~ys~~~l~v~------------------- 733 (845)
T 3abz_A 675 QDNPAFLNFKTEFGRVIYGEDIFV--GYRYYEKLQRKVAFPFGYGLSYTTFELDISDFKVT------------------- 733 (845)
T ss_dssp GGSTTTTSCSCBTTEEECTTTTCC--THHHHHHHTCCCSBCTTCCBCSSCEEEEEEEEEEC-------------------
T ss_pred hhCCccccCCCCCCceeccCCccC--CCcchhcCCCceeecccCCCcceeEEEeccccccc-------------------
Confidence 568865321 100 1122333 599997 5799999999999999999 88721
Q ss_pred ccccccccccCCceeEEEEEEEEeCC-CCCcceEEEEEEeCCCC-CCCcccccccccceecCCCCeEEEEEEec-cCCCe
Q 004190 655 GKAIKVTHAKCNRLTLGVQVDVKNVG-SKDGAHTLLVFSTPPAG-HWAPHKQLVAFEKVHVPAGAQQRVGINIH-VCKYL 731 (770)
Q Consensus 655 ~~~~~~~~~~~~~~~~~v~v~VtNtG-~~~G~eVvQlYv~~~~~-~~~P~k~L~gF~kv~L~pGes~~V~~~l~-~~~~l 731 (770)
++.++|+|+||||| +++|+||||||+++|.+ +.+|+|+||||+||+|+||||++|+|+|+ . ++|
T Consensus 734 ------------~~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~-~~l 800 (845)
T 3abz_A 734 ------------DDKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKGFEKVHLEPGEKKTVNIDLELK-DAI 800 (845)
T ss_dssp ------------SSEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEEEEEEEECTTCEEEEEEEEEHH-HHH
T ss_pred ------------CCeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheeccceeEEECCCCEEEEEEEeCCh-HHe
Confidence 14699999999999 99999999999999987 57899999999999999999999999999 8 799
Q ss_pred eEEeCC-CcEEeeCeEEEEEEeCCCCeEEEEEE
Q 004190 732 SVVDRS-GTRRIPLGEHNIHIGGTKHSVSLHAA 763 (770)
Q Consensus 732 s~~d~~-~~~~~~~G~y~~~vG~ss~~~~~~~~ 763 (770)
++||+. ++|++|+|+|+|+||.||++++++..
T Consensus 801 ~~~d~~~~~~~~e~G~y~v~vG~ss~di~l~~~ 833 (845)
T 3abz_A 801 SYFNEELGKWHVEAGEYLVSVGTSSDDILSVKE 833 (845)
T ss_dssp CEEETTTTEEEECSEEEEEEEESSTTCEEEEEE
T ss_pred eEEecCCCeEEEcCCEEEEEEECCCCCceeEEE
Confidence 999996 78999999999999999999876543
No 2
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=100.00 E-value=9.6e-146 Score=1286.89 Aligned_cols=637 Identities=25% Similarity=0.391 Sum_probs=535.6
Q ss_pred hHHHHHHHHhcCCHHHHHHHhcCC----------CCCCCCCCCchhhhHhhhhccccccCCCcccCCCCCCCcccccccc
Q 004190 49 IPQRVNDLIGRLSLQEKVKLLISG----------AAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVIT 118 (770)
Q Consensus 49 ~~~rv~~ll~~MTleEKi~ql~~~----------~~~~~rlgip~~~~~~~~~~g~~~~~~g~~~~~~~~~~t~fP~~~~ 118 (770)
+++|+++||++||||||++||.+. +.+++|||||.+. +.|++||++.. .++|.||++++
T Consensus 12 a~~ra~~l~~~lTl~EK~~l~~g~~~~~~~~~~~~~~i~rlgiP~~~-~~Dg~~G~r~~----------~~~T~fP~~~~ 80 (713)
T 3zyz_A 12 AYDKAKAALAKLNLQDKVGIVSGVGWNGGPCVGNTSPASKISYPSLC-LQDGPLGVRYS----------TGSTAFTPGVQ 80 (713)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHBBCCTTCSSSSEEBCCBGGGTBCCCE-EECCTTSCTTC----------SSCCCCCCHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHhcCCCcccCccccccCCcCCCCCceEE-EEecCceEECC----------CCCCcCcCHHH
Confidence 789999999999999999999753 5689999999984 67888887422 24899999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHhhcCCCCcceE-eccccc-ccCCCCCCccCCCCCCChHHHHHHHHHHHHHhhcCCCC
Q 004190 119 TASSFNATLWEAIGRVVSDEARAMYNGGTAGLTY-WSPNVN-IFRDPRWGRGQETPGEDPVLSGKYAASYVRGLQGSDGD 196 (770)
Q Consensus 119 laat~d~~l~~~~g~~~g~E~ra~~~~g~~G~~~-laP~~d-l~r~p~~gr~~e~fgeDP~l~~~~~~a~v~G~Q~~~g~ 196 (770)
+|||||++|++++|+++|+|+|++ |+|+ |+|++| |.|||+|||++|+|||||+|+++|+.|+|+|+|+ .|
T Consensus 81 laat~d~~l~~~~g~~~g~E~ra~------Gi~~~laP~vd~v~r~P~~gR~~e~fgeDP~l~~~~a~a~v~Glq~-~g- 152 (713)
T 3zyz_A 81 AASTWDVNLIRERGQFIGEEVKAS------GIHVILGPVAGPLGKTPQGGRNWEGFGVDPYLTGIAMGQTINGIQS-VG- 152 (713)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHT------TCSEECCCBCSSCCCSTTCTTGGGTTCSCHHHHHHHHHHHHHHHHH-TT-
T ss_pred HHhcCCHHHHHHHHHHHHHHHHhc------CCCEEECCeecccCCCCCCCcccccccCCHHHHHHHHHHHHHHHhh-CC-
Confidence 999999999999999999999999 8898 999999 8899999999999999999999999999999999 78
Q ss_pred cceeEEeecccccccCCCCCCCcccccccccCHHHHHhhccHHHHHHHHcCCccEEEecccCCCCcccccCHHHHHHhhh
Q 004190 197 RLKVAASCKHFTAYDLDNWNGVDRFHFNAKVSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIR 276 (770)
Q Consensus 197 ~~~v~a~~KHFpg~~~~~~~~~~r~~~~~~~~~~~l~e~~l~PF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR 276 (770)
|++|+||||||+++. .|...++.+++++|+|+||+||+++|++| +++||||||++||+|||.|++||++|||
T Consensus 153 ---V~a~~KHF~g~g~e~----~r~~~~~~v~~~~l~e~~l~pF~~ai~ag-~~~VM~syn~vng~pa~~s~~ll~~iLR 224 (713)
T 3zyz_A 153 ---VQATAKHYILNEQEL----NRETISSNPDDRTLHELYTWPFADAVQAN-VASVMCSYNKVNTTWACEDQYTLQTVLK 224 (713)
T ss_dssp ---CEEEEEEETTCCCST----TTTTCEECCCHHHHHHTTTHHHHHHHHTT-CSEEEECSSEETTEEGGGCHHHHCCCCC
T ss_pred ---eEEEEecCccCCccc----cCccccCcCCHHHHHHhhhHHHHHHHHcC-CCeEEeeccccCCccCcCCHHHHHHHHH
Confidence 999999999999764 45556778999999999999999999988 5699999999999999999999999999
Q ss_pred cccccceEEEcCchhhccccccccccCChHHHHHHHHHcCCCcCCCc--------chhHHHHHHHHcCCCCHHHHHHHHH
Q 004190 277 GEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCGP--------FLGLHTESAVQRGLLSEIDINNALV 348 (770)
Q Consensus 277 ~e~Gf~G~VvSD~~~~~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~--------~~~~~l~~av~~G~i~~~~ld~av~ 348 (770)
+||||+|+|||||+++. ++++|++||+||+|+. ++.+.|.+||++|+|+++|||+||+
T Consensus 225 ~e~GF~G~VvSD~~a~~--------------~~~~ai~AG~D~~m~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~ 290 (713)
T 3zyz_A 225 DQLGFPGYVMTDWNAQH--------------TTVQSANSGLDMSMPGTDFNGNNRLWGPALTNAVNSNQVPTSRVDDMVT 290 (713)
T ss_dssp CCSCCCSEEEESTTCCC--------------CSHHHHHHTCCBBSSSSCTTSCCCCSTHHHHHHHHTTSSCHHHHHHHHH
T ss_pred HHcCCCEEEEecCccHH--------------HHHHHHHcCCCEeCCCCcccchhHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 99999999999998642 3578999999999963 2458899999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCCCCCCCccCChhhHHHHHHHHhhceeeeccCCCCCCcccCCcceEEEEccCCCCce---
Q 004190 349 NTLTVQMRLGMFDGEPSSQPYGHLGPKDVCTPDHQELALEAARQGIVLLKNQGPSLPLSHIRHRTVAVIGPNSDVTV--- 425 (770)
Q Consensus 349 RiL~~k~~~Gl~~~~p~~~~~~~~~~~~v~~~~h~~la~~aA~esiVLLKN~~~~LPL~~~~~~kIaviG~~a~~~~--- 425 (770)
|||++|+++|+|| ++. |..+. ....+++|+++++++|+||||||||++++|||++. +||+||||+|+...
T Consensus 291 RIL~~k~~lg~~~-~~~--~~~~~--~~~~~~~h~~la~~~a~~sivLLKN~~~~LPL~~~--~~IaViG~~A~~~~~G~ 363 (713)
T 3zyz_A 291 RILAAWYLTGQDQ-AGY--PSFNI--SRNVQGNHKTNVRAIARDGIVLLKNDANILPLKKP--ASIAVVGSAAIIGNHAR 363 (713)
T ss_dssp HHHHHHHHTTTTS-TTC--CCCCT--TSCCCTTTHHHHHHHHHHTCEEEEEGGGCCSCCCC--SEEEEESGGGSCCTTTT
T ss_pred HHHHHHHHhCCcc-cCC--CCccc--ccccCHHHHHHHHHhhhcceEEEccCCCccccCCC--CEEEEECCCcccccccc
Confidence 9999999999997 332 22221 12237899999999999999999999999999874 69999999987421
Q ss_pred --------------eecccccc--cCCCcCCHHHHHHhhhe-----eeeeeccCcccCCchhhHHHHHHHhhccCEEEEE
Q 004190 426 --------------TMIGNYAG--IACGYTTPLQGIGRYAR-----TIHQQGCKDVACADDQLFGAAIDASRQADATILV 484 (770)
Q Consensus 426 --------------~~~G~~~g--~~~~~~t~~~gl~~~~~-----~~~~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~ 484 (770)
...|++++ .+++.+|++++|+++.. +.+.. ...+++++++|+++|++||+
T Consensus 364 ~~~~~~~~~~~~~~~~~g~gs~~~~~~~~~t~~~~i~~~~~~~g~~v~~~~---------~~~~~~a~~~A~~aDv~Iv~ 434 (713)
T 3zyz_A 364 NSPSCNDKGCDDGALGMGWGSGAVNYPYFVAPYDAINTRASSQGTQVTLSN---------TDNTSSGASAARGKDVAIVF 434 (713)
T ss_dssp TCTTSGGGCCCCSSCCCCBSTTCCCCSCCCCHHHHHHHHHHTTTCEEEEEC---------SCCHHHHHHHHTTCSEEEEE
T ss_pred ccccccccccccCceecccCCCCcCcCCCCCHHHHHHHHhccCCeEEEEeC---------CccHHHHHHHhhcCCEEEEE
Confidence 11233333 46678999999998742 33321 22478899999999999999
Q ss_pred eCCCcccccccc--------ccCCCCCChhHHHHHHHHHhhCCCCEEEEEecCCeeee-ccccCCCCcceEEeccCCCch
Q 004190 485 MGLDQSIEAEAL--------DRAGLLLPGRQQELVSKVSMASKGPTILVLMSGGPIDV-AFAKNDPRIAAIIWAGYPGQA 555 (770)
Q Consensus 485 vG~~~~~~~Eg~--------Dr~~l~Lp~~q~~li~~v~~~~~~pvIvVl~~g~P~~l-~~~~~~~~v~AiL~a~~~G~e 555 (770)
+|.. ++||. ||.+|.||+.|.+||++|+++ ++|+|||+++|+|++| +|+ +.++++|||++|||||+
T Consensus 435 vg~~---~gEg~~~~~g~~gDR~~l~Lp~~Q~~Li~~v~~~-~~~~VVVl~sG~p~~~~~w~-~~~~v~Ail~aw~pGqe 509 (713)
T 3zyz_A 435 ITAD---SGEGYITVEGNAGDRNNLDPWHNGNALVQAVAGA-NSNVIVVVHSVGAIILEQIL-ALPQVKAVVWAGLPSQE 509 (713)
T ss_dssp EEEC---CBCTTCCBTTBCSSCSCSSCSTTHHHHHHHHHHH-CSCEEEEEEESSCCCCHHHH-TCTTEEEEEECCCCGGG
T ss_pred eccc---CCCCccccccCCCCcccccCChhHHHHHHHHHHh-CCCeEEEEecCCcccchhhh-hccccCEEEEcCCCCch
Confidence 9853 46666 999999999999999999975 5789999999999999 676 44689999999999999
Q ss_pred hHHHHHHHHcCCCCCCcccccccCCccccCCCCccccCCCCCCCCCCCC---CcccccCC---CcccccCcCCCCCCcee
Q 004190 556 GGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPG---RTYRFYKG---PVVYPFGHGMSYTNFVH 629 (770)
Q Consensus 556 ~g~AladVL~G~~nPsGkLPvT~~p~~~~~~~p~~~~~~~~~~~~~~~g---~~Yr~~~~---~~lypFG~GLSYTtF~y 629 (770)
+|+||||||||++|||||||+||| ++. +|+|.... +.+ ...|.+ ++||||+. +|+||||||||||||+|
T Consensus 510 gG~AiAdvL~G~~nPSGkLP~T~p-~~~-~d~p~~~~-~~~--~~~y~eg~~vgYRy~d~~~~~plypFG~GLSYTtF~y 584 (713)
T 3zyz_A 510 SGNALVDVLWGDVSPSGKLVYTIA-KSP-NDYNTRIV-SGG--SDSFSEGLFIDYKHFDDANITPRYEFGYGLSYTKFNY 584 (713)
T ss_dssp HHHHHHHHHTTSSCCCCCCSSCBC-SCG-GGSSCCCC-CSS--EECCTTTTCCHHHHHHHTTCCCSBCTTCCBCSSCEEE
T ss_pred hhheehhhhcCCcCCCccCcceec-CCh-hhCCCccc-cCC--ccccCCCCccCceeccCCCCceeecCCCCCCcccEEE
Confidence 999999999999999999999995 543 56774321 111 112322 47999985 79999999999999999
Q ss_pred cccccCccccccCCCCCCcccccccccccccccccCCceeEEEEEEEEeCCCCCcceEEEEEEeCCCC-CCCcccccccc
Q 004190 630 TVANAPTVVAVPLDGRHGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHTLLVFSTPPAG-HWAPHKQLVAF 708 (770)
Q Consensus 630 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~-~~~P~k~L~gF 708 (770)
++++++... .... .. .........+++++.++|+|+|||||+++|+||||||+++|.+ ..+|+|+||||
T Consensus 585 s~l~~~~~~-~~~~-------~~--~~~~~gg~~~~~~~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF 654 (713)
T 3zyz_A 585 SRLSVLSTA-KSGP-------AT--GAVVPGGPSDLFQNVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGF 654 (713)
T ss_dssp EEEEEEECC-CCEE-------CC--SCEETTEETTTTSEEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEE
T ss_pred eeeEecccc-ccCc-------cc--ccccccccccccCCeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhc
Confidence 999854310 0000 00 0000000011235689999999999999999999999999987 47899999999
Q ss_pred cceecCCCCeEEEEEEeccCCCeeEEeCC-CcEEeeCeEEEEEEeCCCCeEEEEEE
Q 004190 709 EKVHVPAGAQQRVGINIHVCKYLSVVDRS-GTRRIPLGEHNIHIGGTKHSVSLHAA 763 (770)
Q Consensus 709 ~kv~L~pGes~~V~~~l~~~~~ls~~d~~-~~~~~~~G~y~~~vG~ss~~~~~~~~ 763 (770)
+||+|+||||++|+|+|+. ++|++||+. ++|++|+|+|+|+||.||++++++..
T Consensus 655 ~kv~L~pGes~~V~~~l~~-~~ls~~d~~~~~w~ve~G~y~v~vG~sS~d~~l~~~ 709 (713)
T 3zyz_A 655 AKLNLTPGQSGTATFNIRR-RDLSYWDTASQKWVVPSGSFGISVGASSRDIRLTST 709 (713)
T ss_dssp EEEEECTTCEEEEEEEEEG-GGGCEEETTTTEEEECCEEEEEEEESSSSCEEEEEE
T ss_pred ccceeCCCCeEEEEEEEcH-HHeeeeecCCCeEEEcCceEEEEEECCCCCcceeEE
Confidence 9999999999999999998 899999986 78999999999999999999988654
No 3
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=100.00 E-value=4.1e-144 Score=1280.36 Aligned_cols=636 Identities=28% Similarity=0.463 Sum_probs=540.2
Q ss_pred HHHHHHHhcCCHHHHHHHhcC-------------------CCCCCCCCCCchhhhHhhhhccccccCCCcccCCCCCCCc
Q 004190 51 QRVNDLIGRLSLQEKVKLLIS-------------------GAAAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGAT 111 (770)
Q Consensus 51 ~rv~~ll~~MTleEKi~ql~~-------------------~~~~~~rlgip~~~~~~~~~~g~~~~~~g~~~~~~~~~~t 111 (770)
+|+++||++||||||++||.+ .+.+++|+|||.+ ++.|++||+... .+..++....++|
T Consensus 2 ~r~~~ll~~mTleEK~~~l~g~~~~~~~g~~~~~~~g~~g~~~~v~rlgiP~~-~~~D~~~G~~~~-~~~~~~~~~~~~t 79 (721)
T 2x41_A 2 EKVNEILSQLTLEEKVKLVVGVGLPGLFGNPHSRVAGAAGETHPVPRVGLPAF-VLADGPAGLRIN-PTRENDENTYYTT 79 (721)
T ss_dssp CHHHHHHHHCCHHHHHHHTBCCCSTTSTTCCCCSSTTCSEECCCBGGGTBCCC-EEECCTTSCCCC-SCCTTCCCCCCCC
T ss_pred hhHHHHHHcCCHHHHHHHhcCCCCCccccccccccccccccccCcccCCCCCE-EEEcCCCCcccc-ccccccccCCCcc
Confidence 589999999999999999986 3456899999998 679999998521 1111111124689
Q ss_pred cccccccccccCCHHHHHHHHHHHHHHHHHhhcCCCCcceE-ecccccccCCCCCCccCCCCCCChHHHHHHHHHHHHHh
Q 004190 112 SFPQVITTASSFNATLWEAIGRVVSDEARAMYNGGTAGLTY-WSPNVNIFRDPRWGRGQETPGEDPVLSGKYAASYVRGL 190 (770)
Q Consensus 112 ~fP~~~~laat~d~~l~~~~g~~~g~E~ra~~~~g~~G~~~-laP~~dl~r~p~~gr~~e~fgeDP~l~~~~~~a~v~G~ 190 (770)
.||+++++|||||++|++++|+++|+|+|++ |+|+ |+|++||+|||+|||++|+|||||+|+++|+.|+|+||
T Consensus 80 ~fP~~~~laat~d~~l~~~~g~~~a~E~~a~------Gi~~~~aP~vdi~r~p~~gR~~e~fgeDP~l~~~~a~a~v~G~ 153 (721)
T 2x41_A 80 AFPVEIMLASTWNRELLEEVGKAMGEEVREY------GVDVLLAPAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKGV 153 (721)
T ss_dssp CCCCHHHHHHTCCHHHHHHHHHHHHHHHHHT------TCSEECCCBCCCCCSTTCTTGGGSCCSSHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHhhcCCHHHHHHHHHHHHHHHHHh------CCCEEeeceECCCCCCCCCcccccCCCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999 8898 99999999999999999999999999999999999999
Q ss_pred hcCCCCcceeEEeecccccccCCCCCCCcccccccccCHHHHHhhccHHHHHHHHcCCccEEEecccCCCCcccccCHHH
Q 004190 191 QGSDGDRLKVAASCKHFTAYDLDNWNGVDRFHFNAKVSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNI 270 (770)
Q Consensus 191 Q~~~g~~~~v~a~~KHFpg~~~~~~~~~~r~~~~~~~~~~~l~e~~l~PF~~ai~~g~~~~vM~sy~~vng~pa~~s~~l 270 (770)
|+ +| |++|+||||||+++ +.|...++.+++++|+|+||+||++||+++.+++||||||++||.|||.|++|
T Consensus 154 q~-~g----V~a~~KHF~g~g~e----~~r~~~ds~~~~~~l~e~~l~pF~~ai~~a~~~~vM~sy~~i~g~pa~~s~~l 224 (721)
T 2x41_A 154 QS-QG----VGACIKHFVANNQE----TNRMVVDTIVSERALREIYLRGFEIAVKKSKPWSVMSAYNKLNGKYCSQNEWL 224 (721)
T ss_dssp HT-TT----CBCEEEEETTCCCC----TTTTTCEEECCHHHHHHTHHHHHHHHHHHHCCSEEEECSSEETTEEGGGCHHH
T ss_pred hh-CC----eEEEecccccCCCC----CCCCcccCCCCHHHHHhhhHHHHHHHHHhcCCCEEEecCCCCCCccccCCHHH
Confidence 99 78 99999999999965 35777788899999999999999999995446799999999999999999999
Q ss_pred HHHhhhcccccceEEEcCchhhccccccccccCChHHHHHHHHHcCCCcCCCcc-hh---------HHHHHHHHcCCCCH
Q 004190 271 LKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCGPF-LG---------LHTESAVQRGLLSE 340 (770)
Q Consensus 271 l~~lLR~e~Gf~G~VvSD~~~~~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~~-~~---------~~l~~av~~G~i~~ 340 (770)
|++|||+||||+|+|||||+++. ++++|++||+||+|+.. .. +.|.+||++|+|++
T Consensus 225 l~~lLR~e~GF~G~VvSD~~~~~--------------~~~~al~AG~D~~m~~~~~~~~~~~~~~~~~l~~av~~G~i~~ 290 (721)
T 2x41_A 225 LKKVLREEWGFEGFVMSDWYAGD--------------NPVEQLKAGNDLIMPGKAYQVNTERRDEIEEIMEALKEGKLSE 290 (721)
T ss_dssp HTCCCCCCTCCCSEEEECTTCSS--------------CHHHHHHHTCCBBCSCCGGGTCTTCCCHHHHHHHHHHHTSSCH
T ss_pred HHHHHHHhcCCCEEEEccCchHH--------------HHHHHHHcCCCcccCCCcccccchhHHHHHHHHHHHHcCCccH
Confidence 99999999999999999998753 46889999999998632 22 88999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCccCChhhHHHHHHHHhhceeeeccCCCCCCcccCCcceEEEEccC
Q 004190 341 IDINNALVNTLTVQMRLGMFDGEPSSQPYGHLGPKDVCTPDHQELALEAARQGIVLLKNQGPSLPLSHIRHRTVAVIGPN 420 (770)
Q Consensus 341 ~~ld~av~RiL~~k~~~Gl~~~~p~~~~~~~~~~~~v~~~~h~~la~~aA~esiVLLKN~~~~LPL~~~~~~kIaviG~~ 420 (770)
++||+||+|||++|+++|+|+ +|. + ...+++++|+++++++|+||||||||++ +|||++. +||+|+|++
T Consensus 291 ~~id~av~Ril~~k~~~gl~~-~~~---~----~~~~~~~~h~~la~~~A~esiVLLKN~~-~LPL~~~--~kIaviG~~ 359 (721)
T 2x41_A 291 EVLDECVRNILKVLVNAPSFK-NYR---Y----SNKPDLEKHAKVAYEAGAEGVVLLRNEE-ALPLSEN--SKIALFGTG 359 (721)
T ss_dssp HHHHHHHHHHHHHHTTSGGGG-TCC---C----CSCCCHHHHHHHHHHHHHHHCEEEEESS-CCSCCTT--CCEEEESGG
T ss_pred HHHHHHHHHHHHHHHHhCCCC-CCC---c----ccccCCHHHHHHHHHHHHhchhhhcCCC-cCCCCCC--CEEEEEecC
Confidence 999999999999999999999 431 1 2346789999999999999999999998 9999864 699999999
Q ss_pred CCCceeeccc-ccccCCCcCCHHHHHHhh-he------eeee-------------ec---cCcc--cCCchhhH--HHHH
Q 004190 421 SDVTVTMIGN-YAGIACGYTTPLQGIGRY-AR------TIHQ-------------QG---CKDV--ACADDQLF--GAAI 472 (770)
Q Consensus 421 a~~~~~~~G~-~~g~~~~~~t~~~gl~~~-~~------~~~~-------------~g---~~~~--~~~~~~~~--~~a~ 472 (770)
++....++++ +...+.+.+|++++|+++ .. +.|. .| +... ...+...+ ++++
T Consensus 360 A~~~~~~g~gs~~~~~~~~vt~~~gl~~~G~~~~~~~~v~y~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~a~ 439 (721)
T 2x41_A 360 QIETIKGGTGSGDTHPRYAISILEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPRRDSWGTIIKPKLPENFLSEKEIH 439 (721)
T ss_dssp GTSCCCSCBSTTCCCCSCCCCHHHHHHHTTCCBCHHHHHHHHHHHHHHHHSTTTSCBC-----CBCCCCCSCCSCHHHHH
T ss_pred CcCccccCCCCCCcCcCCCCCHHHHHHHhccCCCCceEEEEeecccccccccccCCCccceeccccCCCchhhhcHHHHH
Confidence 9887543322 233577889999999987 32 4555 44 3110 11223445 7889
Q ss_pred HHhhccCEEEEEeCCCccccccccccC----CCCCChhHHHHHHHHH----hhCCCCEEEEEecCCeeee-ccccCCCCc
Q 004190 473 DASRQADATILVMGLDQSIEAEALDRA----GLLLPGRQQELVSKVS----MASKGPTILVLMSGGPIDV-AFAKNDPRI 543 (770)
Q Consensus 473 ~~a~~aD~vIv~vG~~~~~~~Eg~Dr~----~l~Lp~~q~~li~~v~----~~~~~pvIvVl~~g~P~~l-~~~~~~~~v 543 (770)
++++++|+|||++|.+ ++||.||. +|.||+.|.+||++++ + .++|||||+++|+|++| +|+ +++
T Consensus 440 ~~a~~aDvvIv~vg~~---~gEg~Dr~~~~~~l~Lp~~q~~LI~~v~~~~~~-~~~~vVVVl~~g~P~~l~~~~---~~v 512 (721)
T 2x41_A 440 KLAKKNDVAVIVISRI---SGEGYDRKPVKGDFYLSDDETDLIKTVSREFHE-QGKKVIVLLNIGSPVEVVSWR---DLV 512 (721)
T ss_dssp HHHHHCSEEEEEEECC---CBTTCCCCSSBTTTBCCHHHHHHHHHHHHHHHH-TTCCEEEEEECSSCCCCTTTG---GGC
T ss_pred HHHhcCCEEEEEEecc---ccccccccCCCCCccCCHHHHHHHHHHHHHHHH-hCCCEEEEEecCCceEccchh---hcC
Confidence 9999999999999976 68999999 9999999999999998 6 46789999999999999 665 479
Q ss_pred ceEEeccCCCchhHHHHHHHHcCCCCCCcccccccCCccccCCCCccccCCCCCC---CCCCC-C--CcccccCC---Cc
Q 004190 544 AAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQ---SKRYP-G--RTYRFYKG---PV 614 (770)
Q Consensus 544 ~AiL~a~~~G~e~g~AladVL~G~~nPsGkLPvT~~p~~~~~~~p~~~~~~~~~~---~~~~~-g--~~Yr~~~~---~~ 614 (770)
+|||++|+||+++|+|+||||||++|||||||+|| |+++ +|+|..++...+.. ...|. | .+|||||. +|
T Consensus 513 ~AiL~a~~pG~egg~AlAdVL~G~vnPSGkLPvT~-p~~~-~~~p~~~~~~~~~~~~~~~~y~eg~~vgYry~d~~~~~p 590 (721)
T 2x41_A 513 DGILLVWQAGQETGRIVADVLTGRINPSGKLPTTF-PRDY-SDVPSWTFPGEPKDNPQKVVYEEDIYVGYRYYDTFGVEP 590 (721)
T ss_dssp SEEEECCCCGGGHHHHHHHHHHTSSCCCCCCSSCE-ESSG-GGCSCTTTTCBSTTSCSEEECTTTTCCTHHHHHHHTCCE
T ss_pred CEEEEcCCCchhHHHHHHHHHcCCCCCCCCCceee-cCcc-ccCccccCCCCCccccccccccCCcccccceeecCCCce
Confidence 99999999999999999999999999999999999 5664 56887222111110 01122 1 36999974 79
Q ss_pred ccccCcCCCCCCceecccccCccccccCCCCCCcccccccccccccccccCCceeEEEEEEEEeCCCCCcceEEEEEEeC
Q 004190 615 VYPFGHGMSYTNFVHTVANAPTVVAVPLDGRHGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGSKDGAHTLLVFSTP 694 (770)
Q Consensus 615 lypFG~GLSYTtF~ys~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~ 694 (770)
+||||||||||||+|+++++.. .++.++|+|+|||||+++|+||||||+++
T Consensus 591 lypFG~GLSYTtF~ys~~~~~~-----------------------------~~~~~~v~v~VtNtG~~~G~eVvQlYv~~ 641 (721)
T 2x41_A 591 AYEFGYGLSYTTFEYSDLNVSF-----------------------------DGETLRVQYRIENTGGRAGKEVSQVYIKA 641 (721)
T ss_dssp EECTTCCBCSSCEEEEEEEEEE-----------------------------CSSEEEEEEEEEECSSSCBCCEEEEEEEC
T ss_pred eeccCCCCCcceeEeeceEeec-----------------------------CCCeEEEEEEEEECCCCCCcEEeeEEEcc
Confidence 9999999999999999987321 12479999999999999999999999999
Q ss_pred CCC-CCCcccccccccce-ecCCCCeEEEEEEeccCCCeeEEeCCCcEEeeCeEEEEEEeCCCCeEEEEE--Eecccc
Q 004190 695 PAG-HWAPHKQLVAFEKV-HVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPLGEHNIHIGGTKHSVSLHA--ATLGVI 768 (770)
Q Consensus 695 ~~~-~~~P~k~L~gF~kv-~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G~y~~~vG~ss~~~~~~~--~~~~~~ 768 (770)
|.+ +.+|+|+||||+|| +|+||||++|+|+|++ ++|++|| .++|++|+|+|+|+||+||++++++. ++.+.+
T Consensus 642 ~~~~~~~P~k~L~gF~kv~~L~pGes~~V~~~l~~-~~l~~~d-~~~~~~e~G~y~v~vG~ss~d~~~~~~~~v~~~~ 717 (721)
T 2x41_A 642 PKGKIDKPFQELKAFHKTRLLNPGESEEVVLEIPV-RDLASFN-GEEWVVEAGEYEVRVGASSRNIKLKGTFSVGEER 717 (721)
T ss_dssp CCSSSCCCSCEEEEEEECCCBCTTCEEEEEEEEEG-GGGCEEC-SSCEEECCEEEEEEEEEETTEEEEEEEEEECSCE
T ss_pred CCCCCCCchHHhhcccccccCCCCCeEEEEEEECH-HHhcEEc-CCeEEEeCceEEEEEECCCCCcceEEEEEECceE
Confidence 987 57899999999999 9999999999999998 8999999 99999999999999999999986654 345543
No 4
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A*
Probab=100.00 E-value=1.6e-115 Score=1016.80 Aligned_cols=521 Identities=27% Similarity=0.423 Sum_probs=447.8
Q ss_pred CCCCCCCChHHHHHHHHhcCCHHHHHHHhcCCC------------------------C--------------------CC
Q 004190 41 PFCQVSLPIPQRVNDLIGRLSLQEKVKLLISGA------------------------A--------------------AV 76 (770)
Q Consensus 41 ~~~d~~~~~~~rv~~ll~~MTleEKi~ql~~~~------------------------~--------------------~~ 76 (770)
||+|++++.++|+++||++|||||||+||++.. + ..
T Consensus 4 ~~~d~~~~~~~rv~~ll~~MTleEKigQl~~~~~~~~~~~~i~~~~vG~vi~~~~~~~~~~~~~~~~~~l~~~lq~~a~~ 83 (602)
T 1x38_A 4 LYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKACMS 83 (602)
T ss_dssp GGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHHHHT
T ss_pred cccCCCCCHHHHHHHHHHcCCHHHHHhhhcccccccccHHHHHhcCCceEEeCCcccccccCCHHHHHHHHHHHHHHhcc
Confidence 899999999999999999999999999997410 0 14
Q ss_pred CCCCCchhhhHhhhhccccccCCCcccCCCCCCCccccccccccccCCHHHHHHHHHHHHHHHHHhhcCCCCcceE-ecc
Q 004190 77 PRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNATLWEAIGRVVSDEARAMYNGGTAGLTY-WSP 155 (770)
Q Consensus 77 ~rlgip~~~~~~~~~~g~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~g~E~ra~~~~g~~G~~~-laP 155 (770)
+|+|||.+ ++.|++||+... .++|.||+++++|||||++|++++|+++|+|+|++ |+|+ |+|
T Consensus 84 ~rlgiP~l-~~~D~~~G~~~~----------~~~t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~------Gi~~~~aP 146 (602)
T 1x38_A 84 TRLGIPMI-YGIDAVHGQNNV----------YGATIFPHNVGLGATRDPYLVKRIGEATALEVRAT------GIQYAFAP 146 (602)
T ss_dssp SSSCCCCE-EEECCSSSSTTS----------TTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHT------TCCEECCC
T ss_pred ccCCCCcE-EEEcCCCceeCC----------CCCCCCCCHHHHHhccCHHHHHHHHHHHHHHHHHc------CCCEEeec
Confidence 68899987 788999987421 25899999999999999999999999999999999 8998 999
Q ss_pred cccccCCCCCCccCCCCCCChHHHHHHHHHHHHHhhcCCCC-----------cceeEEeecccccccCCCCCCCcccccc
Q 004190 156 NVNIFRDPRWGRGQETPGEDPVLSGKYAASYVRGLQGSDGD-----------RLKVAASCKHFTAYDLDNWNGVDRFHFN 224 (770)
Q Consensus 156 ~~dl~r~p~~gr~~e~fgeDP~l~~~~~~a~v~G~Q~~~g~-----------~~~v~a~~KHFpg~~~~~~~~~~r~~~~ 224 (770)
++||+|||+|||++|||||||+|+++|+. ||+|+|++... ..+|+||+|||||||.+.. ++...+
T Consensus 147 ~vdv~r~p~~GR~~esfgeDP~lv~~~a~-~v~GlQ~~~~~~~~~~~~~~~~~~gV~a~~KHFpg~g~~~~---~~~~~~ 222 (602)
T 1x38_A 147 CIAVCRDPRWGRCYESYSEDRRIVQSMTE-LIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVD---GINENN 222 (602)
T ss_dssp BCCCCSCTTSTTGGGSSCSSHHHHHHGGG-HHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGG---GCTTCE
T ss_pred eeccccCCCcCccccCcCCCHHHHHHHHH-HHHHhcCCCccccccccccccccCCeEEEeccccCCCcccc---Cccccc
Confidence 99999999999999999999999999999 99999982100 1249999999999987542 244456
Q ss_pred cccCHHHHHhhccHHHHHHHHcCCccEEEecccCCCCcccccCHHHHHHhhhcccccceEEEcCchhhccccccccccCC
Q 004190 225 AKVSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTST 304 (770)
Q Consensus 225 ~~~~~~~l~e~~l~PF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR~e~Gf~G~VvSD~~~~~~~~~~~~~~~~ 304 (770)
+.+++++|+|+||+||++||++| +++||||||.+||+|||.|++||++|||+||||+|+|||||++|.++...|+ .+
T Consensus 223 ~~~~~~~l~e~~l~pF~~ai~ag-~~~vM~sy~~v~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~~~~~~~~--~~ 299 (602)
T 1x38_A 223 TIINREGLMNIHMPAYKNAMDKG-VSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAG--SD 299 (602)
T ss_dssp ECCCHHHHHHHTSHHHHHHHHTT-CCEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSSSTT--TT
T ss_pred CcCCHHHHHHHHHHHHHHHHHcC-CCEEEecccccCCccccCCHHHHHHHhhcccCCCeEEEccchHHHHHHhhcC--CC
Confidence 78999999999999999999998 5699999999999999999999999999999999999999999998876444 46
Q ss_pred hHHHHHHHHHcCCCcCCCcc----hhHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCC-CCccCC
Q 004190 305 PEEAAADAIRAGLDLDCGPF----LGLHTESAVQRGLLSEIDINNALVNTLTVQMRLGMFDGEPSSQPYGHLG-PKDVCT 379 (770)
Q Consensus 305 ~~ea~~~al~AG~D~~~~~~----~~~~l~~av~~G~i~~~~ld~av~RiL~~k~~~Gl~~~~p~~~~~~~~~-~~~v~~ 379 (770)
..|++++|++||+||+|.+. +.+.|.+||++|+|+++|||+||+|||++|+++|+|+ +| |.+.. ...+++
T Consensus 300 ~~~a~~~al~AG~D~~m~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~~k~~~glf~-~p----~~~~~~~~~~~~ 374 (602)
T 1x38_A 300 YSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFE-NP----YADPAMAEQLGK 374 (602)
T ss_dssp HHHHHHHHHHHTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTT-CC----SCCGGGGGGTTC
T ss_pred HHHHHHHHHHcCCCcccCCcchhhHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCC-CC----CCCcchhhccCC
Confidence 78999999999999998642 4578999999999999999999999999999999999 44 33221 135789
Q ss_pred hhhHHHHHHHHhhceeeeccCC--C---CCCcccCCcceEEEEccCCCCceeecccccc-------cCCCcCCHHHHHHh
Q 004190 380 PDHQELALEAARQGIVLLKNQG--P---SLPLSHIRHRTVAVIGPNSDVTVTMIGNYAG-------IACGYTTPLQGIGR 447 (770)
Q Consensus 380 ~~h~~la~~aA~esiVLLKN~~--~---~LPL~~~~~~kIaviG~~a~~~~~~~G~~~g-------~~~~~~t~~~gl~~ 447 (770)
++|+++++++|+||||||||++ + +|||++. .+||+|+||+++....++|+|+- .+...++++++|++
T Consensus 375 ~~~~~la~~~a~~sivLLKN~~~~~~~~~LPL~~~-~~~iaviG~~A~~~~~~~gg~~~~~~g~~~~~~~~~t~~~~l~~ 453 (602)
T 1x38_A 375 QEHRDLAREAARKSLVLLKNGKTSTDAPLLPLPKK-APKILVAGSHADNLGYQCGGWTIEWQGDTGRTTVGTTILEAVKA 453 (602)
T ss_dssp HHHHHHHHHHHHHHCEEEEECSSTTSCCCCSCCSC-CSEEEEESTTTTCHHHHHCSSSSSTTCCSSCCSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHhceEEeccCCCCCcccccccCCC-CCEEEEEcCCCccccccCCcceeeccCCCCCCCCcccHHHHHHH
Confidence 9999999999999999999997 5 9999865 47999999999986555666532 24567899999998
Q ss_pred hh----eeeeeeccCcccCCchhhHHHHHHHhhccCEEEEEeCCCccccccccccCCCCCChhHHHHHHHHHhhCCCCEE
Q 004190 448 YA----RTIHQQGCKDVACADDQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSMASKGPTI 523 (770)
Q Consensus 448 ~~----~~~~~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp~~q~~li~~v~~~~~~pvI 523 (770)
+. .+.|..++. .++. .++++|++||++|.++..++|| ||.+|.||+.|.+||+++++ ++|+|
T Consensus 454 ~~~~~~~v~~~~~~~----------~~~~-~a~~aD~viv~~g~~~~~e~~g-dr~~l~lp~~q~~li~~v~~--~~~~V 519 (602)
T 1x38_A 454 AVDPSTVVVFAENPD----------AEFV-KSGGFSYAIVAVGEHPYTETKG-DNLNLTIPEPGLSTVQAVCG--GVRCA 519 (602)
T ss_dssp HSCTTCEEEEESSCC----------HHHH-HHTTCSCEEEEEECCCCCGGGG-CCSSCCCCSSSHHHHHHHHT--TSCEE
T ss_pred HhCCCeEEEEcCCCC----------HHHH-HHhhCCEEEEEeccCcccccCC-CcCCcCCChhHHHHHHHHHh--CCCEE
Confidence 64 467766541 1222 3889999999999888888888 99999999999999999986 67999
Q ss_pred EEEecCCeeeeccccCCCCcceEEeccCCCchhHHHHHHHHcCCCCCCcccccccCCccccCCCCccccCCCCCCCCCCC
Q 004190 524 LVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTSNPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYP 603 (770)
Q Consensus 524 vVl~~g~P~~l~~~~~~~~v~AiL~a~~~G~e~g~AladVL~G~~nPsGkLPvT~~p~~~~~~~p~~~~~~~~~~~~~~~ 603 (770)
||+++|+|++|.++. ++++|||++|+||+++ +|+||||||++|||||||+||| ++. +|+|.+ .
T Consensus 520 vVl~~g~P~~l~~~~--~~~~Ail~a~~pG~~g-~AiadvL~G~~nPsGkLP~t~p-~~~-~~~p~~------------~ 582 (602)
T 1x38_A 520 TVLISGRPVVVQPLL--AASDALVAAWLPGSEG-QGVTDALFGDFGFTGRLPRTWF-KSV-DQLPMN------------V 582 (602)
T ss_dssp EEEECSSCCCCHHHH--HHCSEEEEEECCCSBT-HHHHHHHTTSSCCCCCCSSCBC-SCG-GGCSCC------------T
T ss_pred EEEeCCCceeccchh--hccCeEEeccCCchHH-HHHHHHHcCCCCCCccCccccc-Ccc-ccCCcc------------C
Confidence 999999999996543 5899999999999997 9999999999999999999985 543 667752 1
Q ss_pred CCcccccCCCcccccCcCCCCCC
Q 004190 604 GRTYRFYKGPVVYPFGHGMSYTN 626 (770)
Q Consensus 604 g~~Yr~~~~~~lypFG~GLSYTt 626 (770)
+||||+ |+||||||||||+
T Consensus 583 --g~~~~~--plypFG~GLSYt~ 601 (602)
T 1x38_A 583 --GDAHYD--PLFRLGYGLTTNA 601 (602)
T ss_dssp --TCSSCC--CSBCTTCCBCCCC
T ss_pred --CCCCCC--ccCcCCCCcCCCC
Confidence 388885 9999999999996
No 5
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A
Probab=100.00 E-value=3.6e-115 Score=1026.58 Aligned_cols=515 Identities=26% Similarity=0.439 Sum_probs=435.1
Q ss_pred ChHHHHHHHHhcCCHHHHHHHhcCCCC--------------------C-----------------------------CCC
Q 004190 48 PIPQRVNDLIGRLSLQEKVKLLISGAA--------------------A-----------------------------VPR 78 (770)
Q Consensus 48 ~~~~rv~~ll~~MTleEKi~ql~~~~~--------------------~-----------------------------~~r 78 (770)
+.++||++||++||||||||||++... + ..|
T Consensus 21 ~~~~rV~~ll~~MTLeEKiGQL~~~~~~~~~~~~i~~~~vGgvi~~~~~~p~~~~~~s~~q~~~l~~~lq~~a~~~~~~r 100 (822)
T 3rrx_A 21 AVEAQIEKLLAKMTIEQKVAQMIQPEIGYLTVEQMRKYGFGSYLNGGNTAPYGNKRADQATWLKYADEMYLAAMDSTLDG 100 (822)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHEECBTTTCCHHHHHHHCCSEEEECSSSCGGGCSSCCHHHHHHHHHHHHHHHHCCTTTC
T ss_pred cHHHHHHHHHHcCCHHHHHhCccccccCCCCHHHHHhCCCceEEECCccCccccccCCHHHHHHHHHHHHHHHHhhhccc
Confidence 689999999999999999999986310 0 036
Q ss_pred CCCchhhhHhhhhccccccCCCcccCCCCCCCccccccccccccCCHHHHHHHHHHHHHHHHHhhcCCCCcceE-ecccc
Q 004190 79 LGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNATLWEAIGRVVSDEARAMYNGGTAGLTY-WSPNV 157 (770)
Q Consensus 79 lgip~~~~~~~~~~g~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~g~E~ra~~~~g~~G~~~-laP~~ 157 (770)
+|||.+ ++.|++||+... .++|.||+++++|||||++|++++|+++|+|+|++ |+|+ |+|++
T Consensus 101 lgIPll-~~~D~~~G~~~~----------~~aT~FP~~i~laAt~d~~L~~~~g~~ia~E~ra~------Gin~~~aPvv 163 (822)
T 3rrx_A 101 IAIPTV-WGTDAMHGHSNV----------YGATLFPHNIGLGAARDTDLIKRIGQATAKEVAAT------GIEWSFAPTV 163 (822)
T ss_dssp CCCCCE-EEEECTTSSTTS----------TTCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHTT------TCCEEEEEEC
T ss_pred CCCCeE-EEeccCCcEEcc----------CCCCCCcCHHHHhhcCCHHHHHHHHHHHHHHHHhc------CCcEeecccc
Confidence 899987 678888886421 25899999999999999999999999999999999 8998 99999
Q ss_pred cccCCCCCCccCCCCCCChHHHHHHHHHHHHHhhcCCC----CcceeEEeecccccccCCCCCCCcccccccccCHHHHH
Q 004190 158 NIFRDPRWGRGQETPGEDPVLSGKYAASYVRGLQGSDG----DRLKVAASCKHFTAYDLDNWNGVDRFHFNAKVSKQDIE 233 (770)
Q Consensus 158 dl~r~p~~gr~~e~fgeDP~l~~~~~~a~v~G~Q~~~g----~~~~v~a~~KHFpg~~~~~~~~~~r~~~~~~~~~~~l~ 233 (770)
||.|||+|||++|+|||||+|+++|+.|||+|||+..+ +..+|+||+|||||||... .+|...++.+++++|+
T Consensus 164 Dv~rdPr~GR~~EsfGEDP~lv~~~a~A~V~GlQ~~~~~~~~~~~gV~a~~KHFpG~G~~~---~~r~~~~~~vs~~~L~ 240 (822)
T 3rrx_A 164 AVVRDDRWGRTYESYSEDPDLVKRYAGEMVTGIQGDVGADFLKGSNRIATAKHFVGDGGTE---RGVDRGNTLIDEKGLR 240 (822)
T ss_dssp CCCSCTTSTTGGGSSCSCHHHHHHHHHHHHHHHHCCSSTTTTCTTCCEEEEEEESCGGGBG---GGCTTCEECCCHHHHH
T ss_pred ccccCCCcCccccCCCCCHHHHHHHHHHHHHHHhcccccccccCCCeEEEeeeccCCCccc---cCccCccCcCCHHHHH
Confidence 99999999999999999999999999999999998310 1124999999999998532 2455556789999999
Q ss_pred hhccHHHHHHHHcCCccEEEecccCCCCcccccCHHHHHHhhhcccccceEEEcCchhhccccccccccCChHHHHHHHH
Q 004190 234 DTFDVPFRMCVMEGKVASVMCSYNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAI 313 (770)
Q Consensus 234 e~~l~PF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR~e~Gf~G~VvSD~~~~~~~~~~~~~~~~~~ea~~~al 313 (770)
|+||+||+++|++| +.+||||||.+||+|+|.|++||++|||+||||+|+|||||++|+.+.+ +..+++++|+
T Consensus 241 e~~L~PF~~aI~ag-~~sVM~syn~vng~pa~~s~~lLtdlLR~e~GF~G~VvSD~~~~~~i~~------~~~ea~~~Al 313 (822)
T 3rrx_A 241 DIHSAGYFSAINQG-VQSVMASFNSWNGKRVHGDKHLLTDVLKNQLGFDGFVVSDWNAHKFVEG------CDLEQCAQAI 313 (822)
T ss_dssp HTTSHHHHHHHHTT-CSEEEECSSEETTEEGGGCHHHHTCCCCCCSCCCSEEECCTTGGGGSTT------CBTTBCHHHH
T ss_pred HHhhHHHHHHHHcC-CCEEEeccccCCCccccCCHHHHHHHHHHhcCCCeEEecccchhhhhcC------ChHHHHHHHH
Confidence 99999999999988 5699999999999999999999999999999999999999999987643 2346788999
Q ss_pred HcCCCcCCCcc----hhHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCC--CCCCCCCCCccCChhhHHHHH
Q 004190 314 RAGLDLDCGPF----LGLHTESAVQRGLLSEIDINNALVNTLTVQMRLGMFDGEPSS--QPYGHLGPKDVCTPDHQELAL 387 (770)
Q Consensus 314 ~AG~D~~~~~~----~~~~l~~av~~G~i~~~~ld~av~RiL~~k~~~Gl~~~~p~~--~~~~~~~~~~v~~~~h~~la~ 387 (770)
+||+||+|.+. +.+.|.++|++|+|+++|||+||+|||++|+++|||| +|.. .++.. ....+++++|+++++
T Consensus 314 ~AG~Dm~m~~~~~~~~~~~l~~aV~~G~i~e~rID~av~RIL~~K~~lGLfd-~p~~~~~~~~~-~~~~v~~~eh~~lAr 391 (822)
T 3rrx_A 314 NAGVDVIMVPEHFEAFYHNTVKQVKAGVIAESRINDAVRRFLRAKIRWGVFT-KSKPSARPESQ-HPQWLGAAEHRTLAR 391 (822)
T ss_dssp HHTCCBEECTTTHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTTTT-SCCGGGSGGGS-CGGGTTCHHHHHHHH
T ss_pred HcCCCEECCCccHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCC-CCCcccccccc-cccccCCHHHHHHHH
Confidence 99999999753 4578999999999999999999999999999999999 4421 11211 123578999999999
Q ss_pred HHHhhceeeeccCCCCCCcccCCcceEEEEccCCCCceeeccccc----c------cCCCcCCHHHHHHhhh-----eee
Q 004190 388 EAARQGIVLLKNQGPSLPLSHIRHRTVAVIGPNSDVTVTMIGNYA----G------IACGYTTPLQGIGRYA-----RTI 452 (770)
Q Consensus 388 ~aA~esiVLLKN~~~~LPL~~~~~~kIaviG~~a~~~~~~~G~~~----g------~~~~~~t~~~gl~~~~-----~~~ 452 (770)
++|+||||||||++++|||++. +||+||||+|++...+.|+|+ | ..++.+|+++||+++. .+.
T Consensus 392 e~A~eSiVLLKN~~~~LPL~~~--~~IaViGp~A~~~~~~~Ggws~~~~G~gs~~~~~~~~~t~l~gi~~~~~~~~~~v~ 469 (822)
T 3rrx_A 392 EAVRKSLVLLKNNESILPIKAS--SRILVAGKGANAINMQAGGWSVSWQGTDNTNSDFPNATSIFSGLQSQVTKAGGKIT 469 (822)
T ss_dssp HHHHHHCEEEEEGGGCCSBCTT--SEEEEESTTTTCHHHHHCSSSSSSSCTTCCGGGSTTCBCHHHHHHHHHHHTTCEEE
T ss_pred HHHHhceEEEecCCCccCCCCC--CeEEEEcCCccchhhccCCcceeccccCCCcCCCCCCCCHHHHHHHHHHhcCCeEE
Confidence 9999999999999899999874 699999999998766677764 1 1346789999999874 233
Q ss_pred eeeccCcccCCchhhHHHHHHHhhccCEEEEEeCCCccccccccccCCCCCC---hhHHHHHHHHHhhCCCCEEEEEecC
Q 004190 453 HQQGCKDVACADDQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLP---GRQQELVSKVSMASKGPTILVLMSG 529 (770)
Q Consensus 453 ~~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp---~~q~~li~~v~~~~~~pvIvVl~~g 529 (770)
|... .+.++++|++||++|+++..|++| ||.+|.|| +.|.+||+++++ .++|||||+++|
T Consensus 470 ~~~~---------------~~~a~~aDv~Iv~~Ge~~~~e~~g-Dr~~L~lp~g~~~q~~Li~av~a-~g~pvVvVl~sG 532 (822)
T 3rrx_A 470 LSES---------------GEYTSKPDVAIVVIGEEPYAEWFG-DIELLEFQHETKHALALLKQLKA-DNIPVVTVFLSG 532 (822)
T ss_dssp ECTT---------------CCCSSCCSEEEEEEECCCCCGGGG-CCSCCBTTTTTCHHHHHHHHHHH-TTCCEEEEEECS
T ss_pred Eccc---------------ccccccCCeEEEEecCCcccccCC-CcccccCCCCChHHHHHHHHHHH-hCCCEEEEEeCC
Confidence 3211 125788999999999988777776 99999999 679999999986 578999999999
Q ss_pred CeeeeccccCCCCcceEEeccCCCchhHHHHHHHHcCCC------CCCcccccccCCccccCCCCccccCCCCCCCCCCC
Q 004190 530 GPIDVAFAKNDPRIAAIIWAGYPGQAGGTAIADILFGTS------NPGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYP 603 (770)
Q Consensus 530 ~P~~l~~~~~~~~v~AiL~a~~~G~e~g~AladVL~G~~------nPsGkLPvT~~p~~~~~~~p~~~~~~~~~~~~~~~ 603 (770)
+|+.|.++. ++++|||++||||++++ ||||||||++ |||||||+|| |++ .+|+|+.+.
T Consensus 533 rP~~l~~~~--~~~~Ail~aw~pG~eGg-AiAdVLfG~v~g~~~~nPSGkLP~T~-P~~-~~q~P~~~~----------- 596 (822)
T 3rrx_A 533 RPLWVNKEL--NASDAFVAAWLPGSEGE-GVADVLLTNKQGKTQFDFTGKLSFSW-PKY-DDQFTLNLN----------- 596 (822)
T ss_dssp SCCBCHHHH--HTCSEEEEEECCCSBTH-HHHHHHBBCTTSCBSCCCCCCCSSCB-CSS-TTCTTCCTT-----------
T ss_pred cceeccchh--hhCCeEEEcCCCCchhH-HHHHHHhcccccccccCCCCCCceec-cCC-cccCCcccC-----------
Confidence 999996554 47999999999999986 9999999997 9999999998 555 478886211
Q ss_pred CCcccccCCCcccccCcCCCCCCceecc
Q 004190 604 GRTYRFYKGPVVYPFGHGMSYTNFVHTV 631 (770)
Q Consensus 604 g~~Yr~~~~~~lypFG~GLSYTtF~ys~ 631 (770)
+.+| +|+||||||||||||+|..
T Consensus 597 ---~~~~--~PlypFG~GLSYt~f~~~~ 619 (822)
T 3rrx_A 597 ---DADY--DPLFAYGYGLTYQDNINVP 619 (822)
T ss_dssp ---CSSC--CCSBCTTCCBCTTCCCCCC
T ss_pred ---CCCC--ccccCCCCCcCCCCCcccc
Confidence 1122 7999999999999999964
No 6
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A*
Probab=100.00 E-value=4.8e-103 Score=917.14 Aligned_cols=497 Identities=20% Similarity=0.248 Sum_probs=401.9
Q ss_pred CCChHHHHHHHHhcCCHHHHHHHhcCCCCC---------------C----------------------------------
Q 004190 46 SLPIPQRVNDLIGRLSLQEKVKLLISGAAA---------------V---------------------------------- 76 (770)
Q Consensus 46 ~~~~~~rv~~ll~~MTleEKi~ql~~~~~~---------------~---------------------------------- 76 (770)
+.+.++||++||++||||||||||++.... .
T Consensus 28 ~~~~~~rv~~ll~~MTleEKiGQl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vGgvil~~~n~~~~~q~~~l~~ 107 (642)
T 3bmx_A 28 ASKRAIDANQIVNRMSLDEKLGQMLMPDFRNWQKEGESSPQALTKMNDEVASLVKKYQFGGIILFAENVKTTKQTVQLTD 107 (642)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHTEECBCSEECCTTCSSCEECCSCCHHHHHHHHHHCCSEEECCGGGCSSHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCHHHHHhCceeecccccccccccccCCCCCCcHHHHHHHHhCCCcEEEECCCCCCCHHHHHHHHH
Confidence 457899999999999999999999763210 0
Q ss_pred ----CCCCCchhhhHhhhhccccccCCCcccCCCCCCCccccccccccccCCHHHHHHHHHHHHHHHHHhhcCCCCcceE
Q 004190 77 ----PRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNATLWEAIGRVVSDEARAMYNGGTAGLTY 152 (770)
Q Consensus 77 ----~rlgip~~~~~~~~~~g~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~g~E~ra~~~~g~~G~~~ 152 (770)
.++|||.+ +..|++||. ...... .|.||+++++|||||++|++++|+++|+|+|++ |+|+
T Consensus 108 ~lq~~~~~iPll-i~~D~e~G~--------v~r~~~-~t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~------Gi~~ 171 (642)
T 3bmx_A 108 DYQKASPKIPLM-LSIDQEGGI--------VTRLGE-GTNFPGNMALGAARSRINAYQTGSIIGKELSAL------GINT 171 (642)
T ss_dssp HHHHHCSSSCCE-EEECCCBTT--------BCCCSS-SCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH------TCCE
T ss_pred HHHHHhcCCCcE-EEEcCCCCc--------eecCCC-CCCCCCHHHHHhhCCHHHHHHHHHHHHHHHHHc------CCCE
Confidence 13455544 334444443 111112 399999999999999999999999999999999 8998
Q ss_pred -ecccccccCCCCCCc-cCCCCCCChHHHHHHHHHHHHHhhcCCCCcceeEEeecccccccCC---CCCCCccccccccc
Q 004190 153 -WSPNVNIFRDPRWGR-GQETPGEDPVLSGKYAASYVRGLQGSDGDRLKVAASCKHFTAYDLD---NWNGVDRFHFNAKV 227 (770)
Q Consensus 153 -laP~~dl~r~p~~gr-~~e~fgeDP~l~~~~~~a~v~G~Q~~~g~~~~v~a~~KHFpg~~~~---~~~~~~r~~~~~~~ 227 (770)
|+|++||+|||+||| ++|+|||||+++++|+.|||+|+|+ .| |++|+|||||||.. +|.+.++ +.+
T Consensus 172 ~~aPvvDv~r~p~~grig~rsfgeDP~lv~~~a~a~v~Glq~-~g----V~a~~KHFpg~g~~~~dsh~~~~~----~~~ 242 (642)
T 3bmx_A 172 DFSPVVDINNNPDNPVIGVRSFSSNRELTSRLGLYTMKGLQR-QD----IASALKHFPGHGDTDVDSHYGLPL----VSH 242 (642)
T ss_dssp ECCCBCCCCCCTTCSSSGGGSSCSSHHHHHHHHHHHHHHHHH-TT----CEEEEEEETCCTTCSSCTTTSCCB----CCC
T ss_pred EECCccccCCCCCCCcccccccCCCHHHHHHHHHHHHHHHHh-CC----ceEEeccccCCCCccCCCCCCCce----ecc
Confidence 999999999999997 7899999999999999999999999 78 99999999999754 3333332 356
Q ss_pred CHHHHHhhccHHHHHHHHcCCccEEEec---ccCCC-------------CcccccCHHHHHHhhhcccccceEEEcCchh
Q 004190 228 SKQDIEDTFDVPFRMCVMEGKVASVMCS---YNQVN-------------GVPTCADPNILKRTIRGEWRLNGYIVSDCDS 291 (770)
Q Consensus 228 ~~~~l~e~~l~PF~~ai~~g~~~~vM~s---y~~vn-------------g~pa~~s~~ll~~lLR~e~Gf~G~VvSD~~~ 291 (770)
++++|+|+||+||+++|++|. ++|||| ||.+| |+|||+|++||++|||+||||+|+|||||++
T Consensus 243 ~~~~l~e~~l~PF~~ai~ag~-~~VM~ah~~y~~id~~~~~~~~~g~~~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~ 321 (642)
T 3bmx_A 243 GQERLREVELYPFQKAIDAGA-DMVMTAHVQFPAFDDTTYKSKLDGSDILVPATLSKKVMTGLLRQEMGFNGVIVTDALN 321 (642)
T ss_dssp CHHHHHHTTHHHHHHHHHTTC-CEEEECCCBCTTTCCCEEECTTTSCEEECBGGGCHHHHCCCCCCCSCCCSEEECSCTT
T ss_pred CHHHHhhhhHHHHHHHHHcCC-CEEEEccccccccCccccccccccccCcccccCCHHHHHHHhhCcCCCCEEEEeCchh
Confidence 999999999999999999885 799999 66777 7899999999999999999999999999999
Q ss_pred hccccccccccCChHHHHHHHHHcCCCcCCCc-------------chhHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhC
Q 004190 292 VGVYYDTQHFTSTPEEAAADAIRAGLDLDCGP-------------FLGLHTESAVQRGLLSEIDINNALVNTLTVQMRLG 358 (770)
Q Consensus 292 ~~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~-------------~~~~~l~~av~~G~i~~~~ld~av~RiL~~k~~~G 358 (770)
|+++.+. .+..+++++|++||+||+|.+ .+.+.|.+||++|+|+++|||+||+|||++|+++|
T Consensus 322 m~ai~~~----~~~~~a~~~Al~AG~D~~l~~~~~~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~~k~~~g 397 (642)
T 3bmx_A 322 MKAIADH----FGQEEAVVMAVKAGVDIALMPASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNSVERIISLKIKRG 397 (642)
T ss_dssp SHHHHTT----SCHHHHHHHHHHHTCSBEESCSCCCSGGGTHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHhc----CCHHHHHHHHHHcCCCEecccccccccccchhHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHcC
Confidence 9988752 267899999999999999543 24578999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCC------CCccCChhhHHHHHHHHhhceeeeccCCCCCCcccCCcceEEEEccCCCCceeeccccc
Q 004190 359 MFDGEPSSQPYGHLG------PKDVCTPDHQELALEAARQGIVLLKNQGPSLPLSHIRHRTVAVIGPNSDVTVTMIGNYA 432 (770)
Q Consensus 359 l~~~~p~~~~~~~~~------~~~v~~~~h~~la~~aA~esiVLLKN~~~~LPL~~~~~~kIaviG~~a~~~~~~~G~~~ 432 (770)
+|+..| |.+.. ...+++++|+++++++|+||||||||++++|||++++.+||+|+||++..
T Consensus 398 l~~~~p----~~~~~~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~~~~~~iaviG~~~~~--------- 464 (642)
T 3bmx_A 398 MYPARN----SDSTKEKIAKAKKIVGSKQHLKAEKKLAEKAVTVLKNEQHTLPFKPKKGSRILIVAPYEEQ--------- 464 (642)
T ss_dssp CSSCCC----CCCHHHHHHHHHHHTTCHHHHHHHHHHHHHHCEEEEEGGGCCSCCCCTTCEEEEEESSHHH---------
T ss_pred CCcCCC----CcccccchhhhhhhcCCHHHHHHHHHHHHhCEEEEccCCCcCCCCCCCCCEEEEEeCCccc---------
Confidence 999423 33210 12467999999999999999999999989999985445799999987432
Q ss_pred ccCCCcCCHHHHHHhhh---eeeeeeccCcccCCchhhHHHHHHHhhccCEEEEEeCCCccccccccccCCCCCChhH--
Q 004190 433 GIACGYTTPLQGIGRYA---RTIHQQGCKDVACADDQLFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQ-- 507 (770)
Q Consensus 433 g~~~~~~t~~~gl~~~~---~~~~~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp~~q-- 507 (770)
..+++++|+++. ...+..++... ......+++++++++++|+|||+++.......| ++.+|+.|
T Consensus 465 -----~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~a~~aDvvIv~~~~~~~~~~e-----~~~l~~~q~~ 533 (642)
T 3bmx_A 465 -----TASIEQTIHDLIKRKKIKPVSLSKMN-FASQVFKTEHEKQVKEADYIITGSYVVKNDPVV-----NDGVIDDTIS 533 (642)
T ss_dssp -----HHHHHHHHHHHHHTTSSCCCEEEEEE-CTTCCCCHHHHHHHHHCSEEEEEECCSSCCCCE-----ETTEECCCCC
T ss_pred -----hhhHHHHHHHhhCCCCeeEEeccCCC-CcchhhHHHHHHHHhhCCEEEEEecCCCCCchh-----ccCCcccccc
Confidence 246789998875 33333332111 111234678899999999999955532111122 34567777
Q ss_pred ----------HHHHHHHHhhCCCCEEEEEecCCeeeeccccCCCCcceEEeccCC--------CchhHHHHHHHHcCCCC
Q 004190 508 ----------QELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYP--------GQAGGTAIADILFGTSN 569 (770)
Q Consensus 508 ----------~~li~~v~~~~~~pvIvVl~~g~P~~l~~~~~~~~v~AiL~a~~~--------G~e~g~AladVL~G~~n 569 (770)
.+||+++++ .++|||||. .|+|++++|+. +++|||++|++ |+++|+|+||||||++|
T Consensus 534 ~~~~~~~~~~~~li~~~~~-~~~pvVvv~-~g~P~~l~~~~---~~~Ail~a~~~~G~~~g~~g~~~g~AiadvLfG~~n 608 (642)
T 3bmx_A 534 DSSKWATVFPRAVMKAALQ-HNKPFVLMS-LRNPYDAANFE---EAKALIAVYGFKGYANGRYLQPNIPAGVMAIFGQAK 608 (642)
T ss_dssp SSTTHHHHHHHHHHHHHHH-TTCCEEEEE-CSCGGGGGGCT---TCSEEEECSCCCCEETTEESCSHHHHHHHHHTTSSC
T ss_pred ccccccchhHHHHHHHHHH-cCCCEEEEe-cCChhcccccc---ccCeEEEEccCcccccccccchHHHHHHHHHcCCCC
Confidence 999999976 678988765 59999999874 69999999999 79999999999999999
Q ss_pred CCcccccccCCccccCCCCccccCCCCCCCCCCCCCcccccCCCcccccCcCCCCCCce
Q 004190 570 PGGKLPMTWYPQEYITNLPMTEMAMRPSQSKRYPGRTYRFYKGPVVYPFGHGMSYTNFV 628 (770)
Q Consensus 570 PsGkLPvT~~p~~~~~~~p~~~~~~~~~~~~~~~g~~Yr~~~~~~lypFG~GLSYTtF~ 628 (770)
||||||+|||++. . + .+|+||||||||||+|.
T Consensus 609 PsGkLPvt~p~~~----~---------------~--------~~plfpfG~GLsYt~~~ 640 (642)
T 3bmx_A 609 PKGTLPVDIPSVT----K---------------P--------GNTLYPLGYGLNIKTGR 640 (642)
T ss_dssp CCCCCSSCEECSS----S---------------T--------TSEEECTTCCBCTTTCS
T ss_pred CCccCceeeeccC----C---------------C--------CCcccCCCCCccCCCCC
Confidence 9999999995321 1 1 26899999999999985
No 7
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A*
Probab=100.00 E-value=3.7e-73 Score=641.96 Aligned_cols=399 Identities=18% Similarity=0.194 Sum_probs=304.1
Q ss_pred CCccccccccccccCCH------HHHHHHHHHHHHHHHHhhcCCCCcceE-ecccccccCCCCCC-ccCCCCCCChHHHH
Q 004190 109 GATSFPQVITTASSFNA------TLWEAIGRVVSDEARAMYNGGTAGLTY-WSPNVNIFRDPRWG-RGQETPGEDPVLSG 180 (770)
Q Consensus 109 ~~t~fP~~~~laat~d~------~l~~~~g~~~g~E~ra~~~~g~~G~~~-laP~~dl~r~p~~g-r~~e~fgeDP~l~~ 180 (770)
++|.||+++++|||||. +|++++|+++|+|+|++ |+|+ |+|++||.|||+|| |++|+|||||++++
T Consensus 102 ~~T~fP~~~alaat~~~d~~~~~~La~~~G~~~a~Elra~------Gin~~fAPvvDv~r~P~~g~ig~rsfGEDP~lv~ 175 (535)
T 3sql_A 102 GATEFPPPMAFGEIWRTDPHQAIALAETMGATTAQEALSL------GINWVLAPVLDVNNNPHNPVINIRAFGETPDQVS 175 (535)
T ss_dssp TSCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH------TCCEECCCBCCCCCCTTCSSSGGGSSCSSHHHHH
T ss_pred CCCCCCCHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHh------CCCEEecCeeccCCCCCCCCccccCCCCCHHHHH
Confidence 57999999999999955 78999999999999999 8998 99999999999999 68999999999999
Q ss_pred HHHHHHHHHhhcCCCCcceeEEeecccccccCCCCCCCcccccccccCHHHHHhhccHHHHHHHHcCCccEEEecccCCC
Q 004190 181 KYAASYVRGLQGSDGDRLKVAASCKHFTAYDLDNWNGVDRFHFNAKVSKQDIEDTFDVPFRMCVMEGKVASVMCSYNQVN 260 (770)
Q Consensus 181 ~~~~a~v~G~Q~~~g~~~~v~a~~KHFpg~~~~~~~~~~r~~~~~~~~~~~l~e~~l~PF~~ai~~g~~~~vM~sy~~vn 260 (770)
+|+.|||+|+|+ .| |++|+|||||||.+..+.+-.. ..+.+++++|+|+||+||+++|++| +++||||||.+|
T Consensus 176 ~~a~A~v~GlQ~-~g----V~a~~KHFpG~G~~~~Dsh~~~-~~v~~s~~~L~e~~L~PF~~aI~ag-~~sVM~ah~~v~ 248 (535)
T 3sql_A 176 ALGTAFIRGAQQ-YA----VLTTAKHFPGHGDTATDSHLAL-PTISHDDTRLNTVELPPFKAAIQGG-VDAVMNAHLMIP 248 (535)
T ss_dssp HHHHHHHHHHTT-SS----CBCEEEEETCCCSCSCCTTTSC-CBCCCCHHHHHHTTSHHHHHHHHTT-CSEEEECCCBBT
T ss_pred HHHHHHHHHHhh-cc----cceeeeeecccCCcccCCccCC-CcCCCCHHHHHHHHHHHHHHHHHcC-CCEEEecCccCC
Confidence 999999999999 78 9999999999986432211111 1234699999999999999999988 569999999887
Q ss_pred ----CcccccCHHHHHHhhhcccccceEEEcCchhhccccccccccCChHHHHHHHHHcCCCcCCCc----chhHHHHHH
Q 004190 261 ----GVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADAIRAGLDLDCGP----FLGLHTESA 332 (770)
Q Consensus 261 ----g~pa~~s~~ll~~lLR~e~Gf~G~VvSD~~~~~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~----~~~~~l~~a 332 (770)
+.|||.|+++|+++||+||||+|+|||||++|+++.+. .+..|++++|++||+||+|.+ .+.+.|.+|
T Consensus 249 ~lD~~~PAs~S~~lLtdlLR~e~GF~G~VvSD~l~m~ai~~~----~~~~eaa~~Al~AG~Dm~l~~~~~~~~~~~l~~A 324 (535)
T 3sql_A 249 AWDQQYPATLSPAILTGQLRHKLGFKGLIVTDALVMGGITQF----AAPDTVVVQAIAAGADILLMPPDVDGAIIAIETA 324 (535)
T ss_dssp TTBSSSCGGGCHHHHCCCCCCCSCCCSEEECSCTTSHHHHTT----SCHHHHHHHHHHHTCSBEESCSCHHHHHHHHHHH
T ss_pred CcCCCcCcccCHHHHHHHHHHhcCCCceEEcChhHHHHHHhc----CCHHHHHHHHHHCCCCeecCCCCHHHHHHHHHHH
Confidence 48999999999999999999999999999999988652 367899999999999998643 346789999
Q ss_pred HHcCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCccCChhhHHHHHHHHhhceeeeccCCCCCCcc----c
Q 004190 333 VQRGLLSEIDINNALVNTLTVQMRLGMFDGEPSSQPYGHLGPKDVCTPDHQELALEAARQGIVLLKNQGPSLPLS----H 408 (770)
Q Consensus 333 v~~G~i~~~~ld~av~RiL~~k~~~Gl~~~~p~~~~~~~~~~~~v~~~~h~~la~~aA~esiVLLKN~~~~LPL~----~ 408 (770)
|++|+|+++|||+||+|||++|+++|+|+. + +... ...+++++|+++++++|+||||| +++|||+ +
T Consensus 325 V~~G~i~e~rId~av~RIL~~K~~lGl~~~-~----~~~~-~~~~~~~eh~~lA~e~A~eSiVL----~~~LPL~~~~~~ 394 (535)
T 3sql_A 325 IKTGQLSESRIYESVERIWQAKQKILTATP-S----TFPQ-GISGDRPETRKTVAMVLERATKH----QKSLVKISSFPD 394 (535)
T ss_dssp HHHTSSCHHHHHHHHHHHHHHHHHHHTSCC-C----CTTT-TCCTTCHHHHHHHHHHHHHHCEE----CSSCCCCCCCST
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHhcCCCC-C----ccch-hhccCCHHHHHHHHHHHHhCeEE----CCcCCCCccccc
Confidence 999999999999999999999999999983 3 1222 23678999999999999999999 3599998 3
Q ss_pred CCcceEEEEccCCCCceeecccccccCCCcCCHHHHHHhh-heeeeeeccCcccCCchhhHHHHHHHhhccCEEEEEeCC
Q 004190 409 IRHRTVAVIGPNSDVTVTMIGNYAGIACGYTTPLQGIGRY-ARTIHQQGCKDVACADDQLFGAAIDASRQADATILVMGL 487 (770)
Q Consensus 409 ~~~~kIaviG~~a~~~~~~~G~~~g~~~~~~t~~~gl~~~-~~~~~~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv~vG~ 487 (770)
++.++|+|||++++.+. |.|.++..++| ++. +++.+...++ +... ......-.+=+++-.
T Consensus 395 ~~~~~laVIG~~a~~~~-----~~g~~~~~~~P----~~~G~~~~~~~~~~---------~~~~-~~~~~~~~~q~f~r~ 455 (535)
T 3sql_A 395 NFARNLIVVDSVLKSPF-----LRPNCPAIAIP----QRHGYAAEIVELKT---------LPRL-QLEAIPTLIQCFLRG 455 (535)
T ss_dssp TSEEEEEEESCGGGCTT-----CCTTCHHHHHH----HTTTEEEEEEETTT---------GGGB-CCCSSCEEEEEEECC
T ss_pred CCCCEEEEECCCCCCcc-----cCCCCCcccCH----HHcCceEEEEcCcc---------cccc-ccCCCCeEEEEeecC
Confidence 44689999999987643 44444444444 333 3455544331 0000 001112222334422
Q ss_pred CccccccccccCCCCCChhHHHHHHHHHhhCCCCEEEEEecCCeeeeccccCCCCcceEEeccCCCc--hhHHHHHHHHc
Q 004190 488 DQSIEAEALDRAGLLLPGRQQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAIIWAGYPGQ--AGGTAIADILF 565 (770)
Q Consensus 488 ~~~~~~Eg~Dr~~l~Lp~~q~~li~~v~~~~~~pvIvVl~~g~P~~l~~~~~~~~v~AiL~a~~~G~--e~g~AladVL~ 565 (770)
++.. .+-. |+ .+.++++.+... +--++.-|+||...|+. +..+.|-|+|.+|| +++.-+...|+
T Consensus 456 ~~f~-------~~~~-~~--~~~~~~l~~~~~--~~~~~~yg~py~~~~~~--~~~~~~p~~~~~gq~~~~q~~~~~~~~ 521 (535)
T 3sql_A 456 NPFT-------EKLA-DP--IDVLQKIAAQIP--LQGVIFYGSPYFLEALQ--TTLPEIPWWFSYGQMAIAQAEICTSLW 521 (535)
T ss_dssp CSSC-------SSCC-CC--HHHHHHHHHHSC--EEEEEEEECCTTHHHHH--HHCTTSCEEEESCCSHHHHHHHHHHTC
T ss_pred CCCC-------CCcc-hH--HHHHHHHHhcCc--eeEEEEeCChhHHHHHH--HHhhcCCcccCCccCHHHHHHHHHHHh
Confidence 2221 1222 33 567777766432 33333348899988774 22335556788886 55555666777
Q ss_pred CC
Q 004190 566 GT 567 (770)
Q Consensus 566 G~ 567 (770)
+.
T Consensus 522 ~~ 523 (535)
T 3sql_A 522 EE 523 (535)
T ss_dssp SS
T ss_pred cc
Confidence 63
No 8
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans}
Probab=100.00 E-value=5.6e-59 Score=504.39 Aligned_cols=252 Identities=19% Similarity=0.248 Sum_probs=212.3
Q ss_pred CCCCchhhhHhhhhccccccCCCcccCCCCCCCccccccccccccCCHHHHHHHHHHHHHHHHHhhcCCCCcceE-eccc
Q 004190 78 RLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNATLWEAIGRVVSDEARAMYNGGTAGLTY-WSPN 156 (770)
Q Consensus 78 rlgip~~~~~~~~~~g~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~g~E~ra~~~~g~~G~~~-laP~ 156 (770)
++|||.+ +..|.++|.... ..+.|.||+++++|||||++|++++|+++|+|+|++ |+|+ |+|+
T Consensus 70 ~~~iPll-i~~D~egG~v~r---------~~~~t~~P~~~~laat~d~~l~~~~g~~~a~E~ra~------Gi~~~~aPv 133 (351)
T 3tev_A 70 VMGEHAL-IAIDHEGGAITR---------PEFWPFAPSAMSLGAADDQQLTEDVNAALARQLRSV------GINWNFTPV 133 (351)
T ss_dssp HHCTTCE-EEECC----------------------CCCHHHHHHHCCHHHHHHHHHHHHHHHHHH------TCCEECCCB
T ss_pred HhCCCCc-eeEeCCCCeEeC---------CCCCCCCCCHHHHHhcCCHHHHHHHHHHHHHHHHHc------CCCEeccce
Confidence 4688876 566666664211 135789999999999999999999999999999999 8998 9999
Q ss_pred ccccCCCCCCccC-CCCCCChHHHHHHHHHHHHHhhcCCCCcceeEEeecccccccCCC---CCCCcccccccccCHHHH
Q 004190 157 VNIFRDPRWGRGQ-ETPGEDPVLSGKYAASYVRGLQGSDGDRLKVAASCKHFTAYDLDN---WNGVDRFHFNAKVSKQDI 232 (770)
Q Consensus 157 ~dl~r~p~~gr~~-e~fgeDP~l~~~~~~a~v~G~Q~~~g~~~~v~a~~KHFpg~~~~~---~~~~~r~~~~~~~~~~~l 232 (770)
+||.|||+|||+. |+|||||+++++|+.|||+|+|+ .| |++|+|||||||.+. |.+.+ .+.+++++|
T Consensus 134 ~Dv~r~p~~~rig~RsfgeDP~lv~~~a~a~v~Glq~-~g----V~a~~KHFpG~g~~~~dsh~~~~----~~~~s~~~L 204 (351)
T 3tev_A 134 LDINVNPANPVIGDRAYGSDAARVTRHGRAALAGHTR-EG----VAPCAKHFPGHGDTHQDSHLALP----RVSKSRAEL 204 (351)
T ss_dssp CCCCCCTTCCSSGGGSSCSSHHHHHHHHHHHHHHHHT-TT----CEECEEEETCCTTCBCSSTTSCC----EECCCHHHH
T ss_pred eEeccCCCCCcccccCCCCCHHHHHHHHHHHHHHHHH-cC----CeEEeeeccCCCCCcCCCCcCCC----cCCCCHHHH
Confidence 9999999999975 69999999999999999999999 78 999999999998643 33222 346799999
Q ss_pred HhhccHHHHHHHHcCCccEEEec---ccCCCC-cccccCHHHHHHhhhcccccceEEEcCchhhccccccccccCChHHH
Q 004190 233 EDTFDVPFRMCVMEGKVASVMCS---YNQVNG-VPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEA 308 (770)
Q Consensus 233 ~e~~l~PF~~ai~~g~~~~vM~s---y~~vng-~pa~~s~~ll~~lLR~e~Gf~G~VvSD~~~~~~~~~~~~~~~~~~ea 308 (770)
+|+||+||+++ ++| +.+|||| ||.+|| .|||+|+++|++|||+||||+|+|||||++|+++... .+..++
T Consensus 205 ~e~~l~PF~~a-~ag-~~~VM~aHi~y~~id~~~Pa~~s~~ll~~lLR~elGF~G~VvSD~~~m~~i~~~----~~~~~~ 278 (351)
T 3tev_A 205 DAGELAPFRAL-LPE-TPAIMTAHIVYDALDAEHPATLSPRILTGLLREEWGYDGVIVTDSMGMQAIDAN----YGRGEA 278 (351)
T ss_dssp HHTTTHHHHHH-GGG-CSEEEECSCEETTTBSSSCGGGCHHHHCCCCCCCSCCCSEEEECCTTSHHHHHH----SCHHHH
T ss_pred HHhhhHHHHHH-hcC-CCEEEecceEecCCCCCcCccCCHHHHHHHHHhhcCCCeEEEeccchHHHHHhc----CCHHHH
Confidence 99999999999 777 5699999 888998 7999999999999999999999999999999988652 246799
Q ss_pred HHHHHHcCCCcCCCcc-------hhHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCCCCC
Q 004190 309 AADAIRAGLDLDCGPF-------LGLHTESAVQRGLLSEIDINNALVNTLTVQMRLGMFDGEP 364 (770)
Q Consensus 309 ~~~al~AG~D~~~~~~-------~~~~l~~av~~G~i~~~~ld~av~RiL~~k~~~Gl~~~~p 364 (770)
+++|++||+||+|.+. +.+.|.++|++ ++++||+||+|||++|+++|+|+ +|
T Consensus 279 ~~~Al~AG~D~~l~~~~~~~~~~~~~~l~~av~~---~~~~id~av~RIL~~k~~~g~f~-~P 337 (351)
T 3tev_A 279 AVRALRAGADLVMALGRREVQQATLAAVAEYVPE---NQAAVATKRERLRALARRFPAQA-DE 337 (351)
T ss_dssp HHHHHHHTCSBEECCSSHHHHHHHHHHHHHHGGG---CHHHHHHHHHHHHHHHHHSCCCC---
T ss_pred HHHHHHcCCCEECCCCChhHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHhCCCC-CC
Confidence 9999999999998632 34678899988 99999999999999999999999 54
No 9
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A*
Probab=100.00 E-value=3.4e-52 Score=449.95 Aligned_cols=249 Identities=18% Similarity=0.206 Sum_probs=205.8
Q ss_pred CCchhhhHhhhhccccccCCCcccCCCCCCCccccccccccccCCH----HHHHHHHHHHHHHHHHhhcCCCCcceE-ec
Q 004190 80 GIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNA----TLWEAIGRVVSDEARAMYNGGTAGLTY-WS 154 (770)
Q Consensus 80 gip~~~~~~~~~~g~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~----~l~~~~g~~~g~E~ra~~~~g~~G~~~-la 154 (770)
+||.+ +..|.++|.. .++ ..++|.||+++++|||||+ +|++++|+++|+|+|++ |+|+ |+
T Consensus 54 ~iPll-i~vD~egG~v-----~r~---~~g~t~fP~~~~lgat~d~~~~~~la~~~g~~~a~Elra~------Gin~~fa 118 (349)
T 4gvf_A 54 RNHLV-VAVDQEGGRV-----QRF---REGFTRLPAAQSFFALHGLEEGGRLAQEAGWLMASEMIAM------DIDISFA 118 (349)
T ss_dssp SSCCE-EEECEEETTE-----ESC---CTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT------TCCEECC
T ss_pred CCCce-eeecCCCcee-----ecc---CCCCCCCccHHHHHHhcCcchHHHHHHHHHHHHHHHHHHc------CCCEEec
Confidence 68877 5666666642 122 2468999999999999999 89999999999999999 8998 99
Q ss_pred ccccccC-CCCCCccCCCCCCChHHHHHHHHHHHHHhhcCCCCcceeEEeecccccccCCCCCCCcccccccccCHHHHH
Q 004190 155 PNVNIFR-DPRWGRGQETPGEDPVLSGKYAASYVRGLQGSDGDRLKVAASCKHFTAYDLDNWNGVDRFHFNAKVSKQDIE 233 (770)
Q Consensus 155 P~~dl~r-~p~~gr~~e~fgeDP~l~~~~~~a~v~G~Q~~~g~~~~v~a~~KHFpg~~~~~~~~~~r~~~~~~~~~~~l~ 233 (770)
|++||.| +|.|| +|+|||||+++++|+.|||+|+|+ .| |++|+|||||||.+..+.+.... ....+.++|+
T Consensus 119 Pv~Dv~r~~~~ig--~rsfgeDP~lv~~~a~a~v~Glq~-~G----V~a~~KHFpG~G~~~~dsh~~~~-v~~~s~~el~ 190 (349)
T 4gvf_A 119 PVLDVGHISAAIG--ERSYHADPAKALAMATRFIDGMHD-AG----MKTTGKHFPGHGAVTADSHKETP-CDPRPETDIR 190 (349)
T ss_dssp CBCCCCSCCTTTG--GGSSCSSHHHHHHHHHHHHHHHHH-HT----CCCEEEEETCCTTCCCCSSSSCC-BCCCCHHHHH
T ss_pred CcccCCCCCCCCc--CcCCCCCHHHHHHHHHHHHHHHHH-cC----ceeeecccccCCCcccCCCCCCC-CCCcCHHHHH
Confidence 9999998 57766 899999999999999999999999 78 99999999999975432221111 1235789999
Q ss_pred hhccHHHHHHHHcCCccEEEec---ccCCCCcccccCHHHHHHhhhcccccceEEEcCchhhccccccccccCChHHHHH
Q 004190 234 DTFDVPFRMCVMEGKVASVMCS---YNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAA 310 (770)
Q Consensus 234 e~~l~PF~~ai~~g~~~~vM~s---y~~vng~pa~~s~~ll~~lLR~e~Gf~G~VvSD~~~~~~~~~~~~~~~~~~ea~~ 310 (770)
|.||+||+++|++|.+.+|||| ||++|+.|||+|+++|++|||+||||+|+|||||++|+++. ...+..|+++
T Consensus 191 ~~~l~PF~~aI~~g~~~~VM~aHv~y~~id~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~----~~~~~~eaa~ 266 (349)
T 4gvf_A 191 GKDMSVFRTLISENKLDAIMPAHVIYRAIDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAA----IMGSYAERAQ 266 (349)
T ss_dssp HTHHHHHHHHHHTTCCSEEEECSCBCTTTCSSCGGGCHHHHCCCCCCCTCCCSEEEEEEGGGCCCG----GGCCHHHHHH
T ss_pred HHHhHHHHHHHHcCCCCeEeecccccCCCCCCCCcCCHHHHHHHHHHhcCCCEEEEecCCcccccc----ccCCHHHHHH
Confidence 9999999999999966799999 99999999999999999999999999999999999998753 3467889999
Q ss_pred HHHHcCCCcCCCcc---hhHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Q 004190 311 DAIRAGLDLDCGPF---LGLHTESAVQRGLLSEIDINNALVNTLTVQMRL 357 (770)
Q Consensus 311 ~al~AG~D~~~~~~---~~~~l~~av~~G~i~~~~ld~av~RiL~~k~~~ 357 (770)
+|++||+||+|.+. ....+++++.. ++++|+++++.|++.-.+.+
T Consensus 267 ~Al~AG~Dm~l~~~~~~~~~~~l~al~~--~~~~r~~~~~~r~~~~~~~l 314 (349)
T 4gvf_A 267 ASLDAGCDMILVCNNRKGAVSVLDNLSP--IKAERVTRLYHKGSFSRREL 314 (349)
T ss_dssp HHHHHTCSEEEECSCHHHHHHHHHHSCC--CCCGGGGGGCCCCCCCHHHH
T ss_pred HHHHcCCCEEcCCCCHHHHHHHHHHhhh--ccHHHHHHHhhcCCCCHHHH
Confidence 99999999998643 33456677754 67788888777664443333
No 10
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A*
Probab=100.00 E-value=1.3e-51 Score=445.64 Aligned_cols=251 Identities=19% Similarity=0.182 Sum_probs=201.2
Q ss_pred CCCCCCchhhhHhhhhccccccCCCcccCCCCCCCccccccccccccCCH------HHHHHHHHHHHHHHHHhhcCCCCc
Q 004190 76 VPRLGIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFNA------TLWEAIGRVVSDEARAMYNGGTAG 149 (770)
Q Consensus 76 ~~rlgip~~~~~~~~~~g~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~------~l~~~~g~~~g~E~ra~~~~g~~G 149 (770)
+.+++||.+ +..|..+|.. .++. ..++|.||+++++|||||+ +|++++|+++|+|+|++ |
T Consensus 59 i~~~~iPll-i~vD~EgG~v-----~r~~--~~g~t~fP~~~~laat~d~d~~~~~~la~~~g~~~a~El~a~------G 124 (348)
T 4g6c_A 59 IRAVREDIL-IAVDHEGGRV-----QRFR--TDGFTVLPAMRRLGELWDRDVLLATKVATAVGYILAAELRAC------G 124 (348)
T ss_dssp HHHHCTTCE-EEECEEETTE-----ESCC--STTCCCCCCHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT------T
T ss_pred HHHhCCCce-EEecCCCCce-----ecCC--CCCCCCCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHc------C
Confidence 345678876 5566666532 1221 1368999999999999997 79999999999999999 8
Q ss_pred ceE-ecccccccCCCCCCccCCCCCCChHHHHHHHHHHHHHhhcCCCCcceeEEeecccccccCCCCCCCcccccccccC
Q 004190 150 LTY-WSPNVNIFRDPRWGRGQETPGEDPVLSGKYAASYVRGLQGSDGDRLKVAASCKHFTAYDLDNWNGVDRFHFNAKVS 228 (770)
Q Consensus 150 ~~~-laP~~dl~r~p~~gr~~e~fgeDP~l~~~~~~a~v~G~Q~~~g~~~~v~a~~KHFpg~~~~~~~~~~r~~~~~~~~ 228 (770)
+|+ |+|++||.+++.+-++.|+|||||+++++|+.|||+|+|+ .| |++|+|||||||.+..+.+-... ....+
T Consensus 125 i~~~~aPv~Dv~~gr~~~iG~rsfgeDP~lv~~~a~A~v~Glq~-~G----V~a~~KHFpG~G~~~~dsh~~~~-v~~~~ 198 (348)
T 4g6c_A 125 IDMSFTPVLDLDYGHSKVIGDRAFHRDPRVVTLLAKSLNHGLSL-AG----MANCGKHFPGHGFAEADSHVALP-TDDRT 198 (348)
T ss_dssp CCEECCCBCCCCCSCCTTTGGGSCCSSHHHHHHHHHHHHHHHHH-TT----CCCCEEEETCSSSCCC----CCC-EECCC
T ss_pred CCEeecCccCCCCCCCCCccCcCCCCCHHHHHHHHHHHHHHHHh-cC----CceeeCCCCCCCCccCCCCCCCC-cCCCC
Confidence 998 9999999844333344699999999999999999999999 78 99999999999865422221111 11346
Q ss_pred HHHHHhhccHHHHHHHHcCCccEEEec---ccCCCCcccccCHHHHHHhhhcccccceEEEcCchhhccccccccccCCh
Q 004190 229 KQDIEDTFDVPFRMCVMEGKVASVMCS---YNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTP 305 (770)
Q Consensus 229 ~~~l~e~~l~PF~~ai~~g~~~~vM~s---y~~vng~pa~~s~~ll~~lLR~e~Gf~G~VvSD~~~~~~~~~~~~~~~~~ 305 (770)
.++|++.||+||+++ ++| +++|||| ||.+|+.|||+|+++|++|||+||||+|+|||||++|+++. ...+.
T Consensus 199 ~~el~~~~l~PF~~a-~ag-~~~VM~aHv~y~~id~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~----~~~~~ 272 (348)
T 4g6c_A 199 LDAILEQDVAPYDWL-GLS-LAAVIPAHVIYTQVDKRPAGFSRVWLQDILRGKLGFTGAIFSDDLSMEAAR----EGGTL 272 (348)
T ss_dssp HHHHHHTTSHHHHHH-GGG-CCEEEECSCEETTTCSSCGGGCHHHHCCCCCCCSCCCSEEEEEETTCGGGG----TTCCH
T ss_pred HHHHHHHHHHHHHHH-hcC-CCeEEecceeecCCCCccccCCHHHHHHHHhhccCCCeEEEccCCchhhhh----hcCCH
Confidence 788888899999999 877 5699999 99999999999999999999999999999999999998764 34678
Q ss_pred HHHHHHHHHcCCCcCCCcc---hhHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Q 004190 306 EEAAADAIRAGLDLDCGPF---LGLHTESAVQRGLLSEIDINNALVNTLTVQMRL 357 (770)
Q Consensus 306 ~ea~~~al~AG~D~~~~~~---~~~~l~~av~~G~i~~~~ld~av~RiL~~k~~~ 357 (770)
.|++++|++||+||+|.+. ....++++|+. +.++++++||++++.+.
T Consensus 273 ~e~a~~Al~AG~Dm~l~~~~~~~~~~~~~al~~-----~~~~~~~~Ri~~l~~r~ 322 (348)
T 4g6c_A 273 TQAADAALAAGCDMVLVCNQPDAAEVVLNGLKA-----RASAESVRRIKRMRARG 322 (348)
T ss_dssp HHHHHHHHHHTCSEEECCSCHHHHHHHHHHCCC-------CHHHHHHHHTTSCCS
T ss_pred HHHHHHHHHcCCCEECCCCChHHHHHHHHHhhc-----ccchHHHHHHHHHHhcc
Confidence 8999999999999998743 34556666643 56789999999997653
No 11
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A
Probab=100.00 E-value=1.1e-51 Score=445.53 Aligned_cols=245 Identities=18% Similarity=0.159 Sum_probs=204.9
Q ss_pred CCchhhhHhhhhccccccCCCcccCCCCCCCccccccccccccCC--HHHHHHHHHHHHHHHHHhhcCCCCcceE-eccc
Q 004190 80 GIKGYEWWSEALHGVSNVGPGTKFGGDFPGATSFPQVITTASSFN--ATLWEAIGRVVSDEARAMYNGGTAGLTY-WSPN 156 (770)
Q Consensus 80 gip~~~~~~~~~~g~~~~~~g~~~~~~~~~~t~fP~~~~laat~d--~~l~~~~g~~~g~E~ra~~~~g~~G~~~-laP~ 156 (770)
+||.+ +..|..+|.. .+...++|.||+++++|| || ++|++++|+++|+|+|++ |+|+ |+|+
T Consensus 54 ~iPll-i~~D~egG~v--------~r~~~~~t~fP~~~~laa-~d~~~~la~~~g~~~a~E~ra~------Gi~~~~aPv 117 (340)
T 2oxn_A 54 KRPIL-IGVDQEGGRV--------QRFREGFSRIPPAQYYAR-AENGVELAEQGGWLMAAELIAH------DVDLSFAPV 117 (340)
T ss_dssp SSCCE-EEECEEETTE--------ESCCTTSCCCCCGGGGGG-STTHHHHHHHHHHHHHHHHHTT------TCCEECCCB
T ss_pred CCCeE-eeecCCCeeE--------eccCCCCCCCCCHHHHhC-CCcHHHHHHHHHHHHHHHHHHh------CCCEEecCc
Confidence 68876 5566666532 122246899999999999 99 999999999999999999 8998 9999
Q ss_pred ccccCCCCCCccCCCCCCChHHHHHHHHHHHHHhhcCCCCcceeEEeecccccccCCCCCCCccccccccc-CHHHHHhh
Q 004190 157 VNIFRDPRWGRGQETPGEDPVLSGKYAASYVRGLQGSDGDRLKVAASCKHFTAYDLDNWNGVDRFHFNAKV-SKQDIEDT 235 (770)
Q Consensus 157 ~dl~r~p~~gr~~e~fgeDP~l~~~~~~a~v~G~Q~~~g~~~~v~a~~KHFpg~~~~~~~~~~r~~~~~~~-~~~~l~e~ 235 (770)
+||.|+ +|.|+.|+|||||+++++|+.|+|+|+|+ .| |++|+|||||||.+..+.+ .+..+ +.++| |.
T Consensus 118 ~Dv~~~-~~~ig~rsfgeDP~lv~~~a~a~v~Glq~-~g----V~a~~KHFpG~G~~~~dsh----~~~~v~~~~~l-~~ 186 (340)
T 2oxn_A 118 LDMGFA-CKAIGNRAFGEDVQTVLKHSSAFLRGMKA-VG----MATTGKHFPGHGAVIADSH----LETPYDERETI-AQ 186 (340)
T ss_dssp CCCCSC-STTTGGGSSCSSHHHHHHHHHHHHHHHHH-TT----CCCEEEEETCCTTCCSCCS----SSSCBCCCSCC-HH
T ss_pred cCCCCC-CCcCcCCCCCCCHHHHHHHHHHHHHHHHH-CC----ceeeeccCcCCCCccCCCC----CCCccCCHHHH-HH
Confidence 999999 88888999999999999999999999999 78 9999999999997643222 12112 33889 99
Q ss_pred ccHHHHHHHHcCCccEEEec---ccCCCCcccccCHHHHHHhhhcccccceEEEcCchhhccccccccccCChHHHHHHH
Q 004190 236 FDVPFRMCVMEGKVASVMCS---YNQVNGVPTCADPNILKRTIRGEWRLNGYIVSDCDSVGVYYDTQHFTSTPEEAAADA 312 (770)
Q Consensus 236 ~l~PF~~ai~~g~~~~vM~s---y~~vng~pa~~s~~ll~~lLR~e~Gf~G~VvSD~~~~~~~~~~~~~~~~~~ea~~~a 312 (770)
||+||+++|++|.+.+|||| ||.+|+.|||+|+++|++|||+||||+|+|||||++|+++.. ..+..|++++|
T Consensus 187 ~l~PF~~ai~~g~~~~VM~aHv~y~~id~~Pa~~s~~ll~~lLR~elGF~G~VvSD~l~m~~~~~----~~~~~ea~~~A 262 (340)
T 2oxn_A 187 DMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVLREELGFKGIVFSDDLSMEGAAV----MGGPVERSHQA 262 (340)
T ss_dssp HHHHHHHHHHHTCCSEEEECSCBBTTTBSSCGGGCHHHHTCCCCCCTCCCSEEEEEEGGGSCHHH----HCSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCeeeeccccccccCCcCcccCHHHHHHHhhcccCCCeEEEcccchhhhhhc----cCCHHHHHHHH
Confidence 99999999999966799999 999999999999999999999999999999999999987642 35778999999
Q ss_pred HHcCCCcCCCcc---hhHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Q 004190 313 IRAGLDLDCGPF---LGLHTESAVQRGLLSEIDINNALVNTLTVQMRL 357 (770)
Q Consensus 313 l~AG~D~~~~~~---~~~~l~~av~~G~i~~~~ld~av~RiL~~k~~~ 357 (770)
++||+||+|.+. ....+.++++ .++++|+++++.|+....+++
T Consensus 263 l~AG~Dm~l~~~~~~~~~~~~~av~--~~~~~Rl~~~~~~~~~~~~~l 308 (340)
T 2oxn_A 263 LVAGCDMILICNKREAAVEVLDNLP--IMEVPQAEALLKKQQFSYSEL 308 (340)
T ss_dssp HHHTCSEEECCSCHHHHHHHHHHSC--CCCCGGGGGGSCSCCCCHHHH
T ss_pred HHcCCCEEcCCCCHHHHHHHHHHHH--HhhHHHHHHHhhcccccHHHH
Confidence 999999998643 3456777773 488999998887765433333
No 12
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=96.75 E-value=0.0043 Score=57.01 Aligned_cols=52 Identities=17% Similarity=0.141 Sum_probs=42.0
Q ss_pred ceeEEEEEEEEeCCCCC-cceEEEEEEeCCCCCCCcccccccccceecCCCCeEEEEEEecc
Q 004190 667 RLTLGVQVDVKNVGSKD-GAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHV 727 (770)
Q Consensus 667 ~~~~~v~v~VtNtG~~~-G~eVvQlYv~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 727 (770)
++.++++|+|+|.|..+ +.--|.||+.. ++.+-+.+.|+||++++|+|.+.+
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyvng---------~~v~t~~v~La~G~s~tv~f~~~~ 84 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYING---------TLYKNWTVSLGPKEEKVLTFNWTP 84 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEETT---------EEEEEEEEEECTTCEEEEEEEECC
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEECC---------EEEeeEEeccCCCCeEEEEEEEEc
Confidence 46799999999999985 67789999943 233444567999999999999986
No 13
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=95.82 E-value=0.029 Score=50.41 Aligned_cols=63 Identities=10% Similarity=0.153 Sum_probs=49.1
Q ss_pred ceeEEEEEEEEeCCCC-CcceEEEEEEeCCCCCCCcccccccccce-ecCCCCeEEEEEEeccCCCeeEEeCCCcEEeeC
Q 004190 667 RLTLGVQVDVKNVGSK-DGAHTLLVFSTPPAGHWAPHKQLVAFEKV-HVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPL 744 (770)
Q Consensus 667 ~~~~~v~v~VtNtG~~-~G~eVvQlYv~~~~~~~~P~k~L~gF~kv-~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~ 744 (770)
+..++++++|+|.|.. ++.-.|-||+.. .+.+...+ .|.+|++++|+|++.+ .. ++
T Consensus 18 ~~~~ti~atVkN~G~~~a~~~~V~ly~~g---------~~v~t~~v~~LaaG~s~tv~~~w~~-~~------------~~ 75 (114)
T 2l0d_A 18 NTVNTMTATIENQGNKDSTSFNVSLLVDG---------IVVDTQTVTSLESENSTNVDFHWTL-DG------------TA 75 (114)
T ss_dssp TSEEEEEEEEEECSSSCBCCEEEEEEETT---------EEEEEEEESCBCBTCEEEEEEEEEC-CC------------SC
T ss_pred CCeEEEEEEEEECCCCCCCCEEEEEEECC---------EEEcceecccccCCCEEEEEEEEee-cC------------cC
Confidence 4679999999999986 577789999854 35666677 5999999999998876 20 35
Q ss_pred eEEEEEE
Q 004190 745 GEHNIHI 751 (770)
Q Consensus 745 G~y~~~v 751 (770)
|.|+|.+
T Consensus 76 G~ytl~a 82 (114)
T 2l0d_A 76 NSYTLTV 82 (114)
T ss_dssp SEEEEEE
T ss_pred ceEEEEE
Confidence 7777765
No 14
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=95.26 E-value=0.013 Score=53.15 Aligned_cols=57 Identities=16% Similarity=0.231 Sum_probs=41.6
Q ss_pred ceeEEEEEEEEeCCCC-CcceEEEEEEeCCCCCCCcccccccccce-ecCCCCeEEEEEEecc
Q 004190 667 RLTLGVQVDVKNVGSK-DGAHTLLVFSTPPAGHWAPHKQLVAFEKV-HVPAGAQQRVGINIHV 727 (770)
Q Consensus 667 ~~~~~v~v~VtNtG~~-~G~eVvQlYv~~~~~~~~P~k~L~gF~kv-~L~pGes~~V~~~l~~ 727 (770)
++.++++++|+|.|.. ++.--|.+|+..|..... +.|-..| .|+||++.+++|++..
T Consensus 15 g~~vTvsatVkN~Gt~~s~a~~V~~yl~~p~~gg~----~vgt~tv~~LaaG~s~t~~v~~~~ 73 (122)
T 2kut_A 15 GEEITVSARVTNRGAAEAHNVPVAVYLGNPAQGGV----EIGRDTISRIPVGGTGLARVQWKA 73 (122)
T ss_dssp TCEEEEEEEEECCSSSCBCCCCEEECSSCTTTCCC----CCBCCCCSCBCTTCEEECCEEEEC
T ss_pred CCeEEEEEEEEeCCCcccCcEEEEEEeCCCccCCe----EEeeEEccccCCCCeEEEEEEEec
Confidence 4689999999999987 566789999998653222 3333335 5999999996555543
No 15
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=90.89 E-value=1.2 Score=40.25 Aligned_cols=70 Identities=9% Similarity=0.060 Sum_probs=48.0
Q ss_pred ceeEEEEEEEEeCCCCCc------ceEEEEEEeCCCCC-------CCcccccccccceecCCCCeEEEEEEeccCCCeeE
Q 004190 667 RLTLGVQVDVKNVGSKDG------AHTLLVFSTPPAGH-------WAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSV 733 (770)
Q Consensus 667 ~~~~~v~v~VtNtG~~~G------~eVvQlYv~~~~~~-------~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~ 733 (770)
++.+.++++|+|.|+.+- -.-..+.|.+..+. .+-- ...+....|+|||+.+.+++++.
T Consensus 17 g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~F--tQa~~~~tl~pGE~~~f~~~w~~------ 88 (120)
T 3isy_A 17 PEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMF--TQAFQNLTLESGETYDFSDVWKE------ 88 (120)
T ss_dssp SSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCC--CCCCEEEEECTTCEEEEEEEESS------
T ss_pred CCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchh--hhhhceEEECCCCEEEEEEEeCC------
Confidence 357999999999998432 12235556554431 1222 22667888999999999998872
Q ss_pred EeCCCcEEeeCeEEEEEE
Q 004190 734 VDRSGTRRIPLGEHNIHI 751 (770)
Q Consensus 734 ~d~~~~~~~~~G~y~~~v 751 (770)
.++||.|++.+
T Consensus 89 -------~~~pG~Ytl~a 99 (120)
T 3isy_A 89 -------VPEPGTYEVKV 99 (120)
T ss_dssp -------CCCSEEEEEEE
T ss_pred -------CCCCccEEEEE
Confidence 35799999854
No 16
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=87.99 E-value=0.53 Score=50.45 Aligned_cols=63 Identities=19% Similarity=0.080 Sum_probs=37.1
Q ss_pred eeEEEEEEEEeCCCCCc------------ceEEEEEEeC---CCCC---CCcccccccccceecCCCCeEEEEEEeccCC
Q 004190 668 LTLGVQVDVKNVGSKDG------------AHTLLVFSTP---PAGH---WAPHKQLVAFEKVHVPAGAQQRVGINIHVCK 729 (770)
Q Consensus 668 ~~~~v~v~VtNtG~~~G------------~eVvQlYv~~---~~~~---~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~ 729 (770)
+.+.|+++|||+|+.+= .+.++++-.. +... .+..-.+..| +.|+||||.+++|+|....
T Consensus 36 ~~~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f--~~L~pG~Sve~~~dla~~y 113 (343)
T 2x3c_A 36 DDVRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDF--QLLKAGQSLTVQAEVSGLY 113 (343)
T ss_dssp SCCEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGE--EEECTTCEEEEEEECTTTB
T ss_pred CCeEEEEEEEeCCCCceEeeccCCCCcCccceEEEEeCCcccceeeEEEeccCCChhhc--EEeCCCCeEEEEEehhhcc
Confidence 34789999999998541 1234444210 1110 1111123444 6799999999999997644
Q ss_pred Cee
Q 004190 730 YLS 732 (770)
Q Consensus 730 ~ls 732 (770)
+|+
T Consensus 114 dLs 116 (343)
T 2x3c_A 114 DMS 116 (343)
T ss_dssp TCC
T ss_pred ccC
Confidence 554
No 17
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.73 E-value=2.2 Score=37.34 Aligned_cols=62 Identities=16% Similarity=0.117 Sum_probs=37.2
Q ss_pred eeEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCcccccccccceecCCCCeEEEEEEeccCCCeeEEe
Q 004190 668 LTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVD 735 (770)
Q Consensus 668 ~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d 735 (770)
...+.+++++|+|+....= ++ ....... ...--....+-.|+||++.+|++++.+ +....++
T Consensus 26 ~~~~~~~~l~N~g~~p~~~--~~--~~~~~~~-~~~f~v~p~~g~i~pg~~~~i~V~f~~-~~~g~f~ 87 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALF--NM--TPPTSAL-GACFVFSPKEGIIEPSGVQAIQISFSS-IILGNFE 87 (112)
T ss_dssp CCEEEEEEEEECCSSCEEE--EE--CCCSSHH-HHHCEEESSEEEECTTBCCEEEEEECC-CCCEEEE
T ss_pred CEEEEEEEEEECCcceEEE--EE--ecCCccc-cCcEEEECCcCEECCCCEEEEEEEEEC-CCcceEE
Confidence 3578899999999975421 11 1111000 000011234457999999999999998 5566654
No 18
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=83.50 E-value=2.1 Score=49.19 Aligned_cols=100 Identities=16% Similarity=0.155 Sum_probs=61.7
Q ss_pred ccccCcCCCCCCceecccccCccccccCCCCCCcccccccccccccccccCCceeEEEEEEEEeCCC--CCcceEEEEEE
Q 004190 615 VYPFGHGMSYTNFVHTVANAPTVVAVPLDGRHGSINATISGKAIKVTHAKCNRLTLGVQVDVKNVGS--KDGAHTLLVFS 692 (770)
Q Consensus 615 lypFG~GLSYTtF~ys~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~VtNtG~--~~G~eVvQlYv 692 (770)
+|..|.|+.|..|..+.+...... ... +.... . .+++.+|+++|+|.+. ++|.+++ ||+
T Consensus 338 ~ye~~~~i~~~~~~~~~l~~~~~~-~~~-------------~~~~~---~-~g~~~~~~~~vtn~~~~~~~~~~~~-~~~ 398 (601)
T 1w8o_A 338 LYEPGTGIRYANFNLAWLGGICAP-FTI-------------PDVAL---E-PGQQVTVPVAVTNQSGIAVPKPSLQ-LDA 398 (601)
T ss_dssp EECCSSEEEEEEECHHHHTBCSCC-EEC-------------CCEEE---C-TTCEEEEEEEEECCSSSCBSSCEEE-EEC
T ss_pred EEecCCcceEEEecHHHhccccCC-CcC-------------cccee---c-CCceeEEEEEEECCCceeccCceEE-Eec
Confidence 466667788888877766521100 000 00000 0 1357899999999977 7898887 888
Q ss_pred eCCCCCCCcccccccccceecCCCCeEEEEEEeccCCCeeEEeCCCcEEeeCeEEEEEEe
Q 004190 693 TPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPLGEHNIHIG 752 (770)
Q Consensus 693 ~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G~y~~~vG 752 (770)
........ .-..++|||+.++.|+|.. .+- +++|.|.+-+.
T Consensus 399 ~~~~~~~~--------~~~~~~~g~~~t~~~~vt~-~~~----------~~~g~y~l~~~ 439 (601)
T 1w8o_A 399 SPDWQVQG--------SVEPLMPGRQAKGQVTITV-PAG----------TTPGRYRVGAT 439 (601)
T ss_dssp CTTSEEEE--------EECCBCTTCEEEEEEEEEC-CTT----------CCCEEEEEEEE
T ss_pred CCCcEEec--------cccccCCCCceEEEEEEec-CCC----------CCCCcEEeeEE
Confidence 44332211 2257899999999888887 321 44677776555
No 19
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=81.00 E-value=3.1 Score=44.00 Aligned_cols=57 Identities=12% Similarity=0.208 Sum_probs=37.5
Q ss_pred ceeEEEEEEEEeCCCCCcceEEEE---------EEeCCCC--CCCccccccccccee------cCCCCeEEEEEEecc
Q 004190 667 RLTLGVQVDVKNVGSKDGAHTLLV---------FSTPPAG--HWAPHKQLVAFEKVH------VPAGAQQRVGINIHV 727 (770)
Q Consensus 667 ~~~~~v~v~VtNtG~~~G~eVvQl---------Yv~~~~~--~~~P~k~L~gF~kv~------L~pGes~~V~~~l~~ 727 (770)
+.+++++++|||+|+ +.|+| |+.+... ...-..+|.+.+... ++|||+++++++..-
T Consensus 263 gR~l~~~~~VtN~g~----~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~PGETr~~~v~a~d 336 (382)
T 1yew_A 263 GRAMRMKLTITNHGN----SPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLAPGETRTVDVTASD 336 (382)
T ss_dssp CSEEEEEEEEEECSS----SCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBCTTCEEEEEEEEEC
T ss_pred CcEEEEEEEEEcCCC----CceEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcCCCceeEEEEEeeh
Confidence 468999999999986 44555 3332211 122345666554433 899999999998763
No 20
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=78.66 E-value=3.1 Score=37.83 Aligned_cols=54 Identities=9% Similarity=0.215 Sum_probs=31.0
Q ss_pred EEEEEEEeCCCCC----cceEEEEEEeCCCCC------CC------c---ccccccccceecCCCCeEEEEEEec
Q 004190 671 GVQVDVKNVGSKD----GAHTLLVFSTPPAGH------WA------P---HKQLVAFEKVHVPAGAQQRVGINIH 726 (770)
Q Consensus 671 ~v~v~VtNtG~~~----G~eVvQlYv~~~~~~------~~------P---~k~L~gF~kv~L~pGes~~V~~~l~ 726 (770)
+|+|+++|+|... +.++|-.=-...... .. | .+.| +....|.|||+.+|+|+++
T Consensus 27 ~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~--~~t~~l~pGes~~vtf~~~ 99 (128)
T 2iaa_C 27 EFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVI--AHTSVIGGGETDSVTFDVS 99 (128)
T ss_dssp EEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEE--EECCCBCTTCEEEEEEESS
T ss_pred EEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhh--ccceeeCCCCEEEEEEecc
Confidence 5789999999987 777663210000000 00 0 0111 1112479999999999986
No 21
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=78.00 E-value=3.9 Score=35.13 Aligned_cols=51 Identities=22% Similarity=0.272 Sum_probs=30.9
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCCCCCCc-----ccccccc-------cceecCCCCeEEEEEE
Q 004190 670 LGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAP-----HKQLVAF-------EKVHVPAGAQQRVGIN 724 (770)
Q Consensus 670 ~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~P-----~k~L~gF-------~kv~L~pGes~~V~~~ 724 (770)
-+++++|+|||+|+ +|+=-+..-....| ...=.|| .-|..+|||+++|++.
T Consensus 20 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV 82 (101)
T 4ep8_B 20 ATCRVVVENHGDRP----IQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELV 82 (101)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEE
T ss_pred CEEEEEEEeCCCcc----eEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEE
Confidence 47889999999987 67633221110011 1111222 3567899999999874
No 22
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=77.23 E-value=3.7 Score=37.42 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=31.2
Q ss_pred EEEEEEEeCCCCC----cceEEEEEEeCCCCC------CC------ccccccc-ccceecCCCCeEEEEEEec
Q 004190 671 GVQVDVKNVGSKD----GAHTLLVFSTPPAGH------WA------PHKQLVA-FEKVHVPAGAQQRVGINIH 726 (770)
Q Consensus 671 ~v~v~VtNtG~~~----G~eVvQlYv~~~~~~------~~------P~k~L~g-F~kv~L~pGes~~V~~~l~ 726 (770)
+|+|+++|+|+.. +.++|-.=-..+... .. |...-+. +.-..|.|||+.+|+|+.+
T Consensus 28 ~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svtf~~~ 100 (129)
T 1cuo_A 28 EFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVKFKVS 100 (129)
T ss_dssp EEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEEEEGG
T ss_pred EEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEEEecc
Confidence 5788999999987 777654321110000 00 1000000 1112479999999999986
No 23
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=71.59 E-value=6.6 Score=35.15 Aligned_cols=52 Identities=13% Similarity=0.102 Sum_probs=31.5
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCc-----ccccccc-------cceecCCCCeEEEEEE
Q 004190 669 TLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAP-----HKQLVAF-------EKVHVPAGAQQRVGIN 724 (770)
Q Consensus 669 ~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~P-----~k~L~gF-------~kv~L~pGes~~V~~~ 724 (770)
.-+++++|+|||+|+ ||+=-+..--...| ...=.|+ .-|..+|||+++|++.
T Consensus 25 r~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ubp_B 25 REKTTIRVSNTGDRP----IQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp SCEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CcEEEEEEEeCCCCC----EEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 346899999999987 67643322111111 1111222 3567799999999884
No 24
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=71.59 E-value=6.6 Score=35.15 Aligned_cols=52 Identities=13% Similarity=0.102 Sum_probs=31.5
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCc-----ccccccc-------cceecCCCCeEEEEEE
Q 004190 669 TLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAP-----HKQLVAF-------EKVHVPAGAQQRVGIN 724 (770)
Q Consensus 669 ~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~P-----~k~L~gF-------~kv~L~pGes~~V~~~ 724 (770)
.-+++++|+|||+|+ ||+=-+..--...| ...=.|+ .-|..+|||+++|++.
T Consensus 25 r~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ac7_B 25 REKTTIRVSNTGDRP----IQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp SCEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CcEEEEEEEeCCCCC----EEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 346899999999987 67643322111111 1111222 3567799999999884
No 25
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.81 E-value=9.8 Score=33.86 Aligned_cols=59 Identities=12% Similarity=0.193 Sum_probs=39.1
Q ss_pred eeEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCcccccccccceecCCCCeEEEEEEeccCCCeeEEeCC
Q 004190 668 LTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRS 737 (770)
Q Consensus 668 ~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~ 737 (770)
.+-+.++.|+|+|+.+++=-.+ ...+- ...|. +-.|+|||+.+|++++.+ +....|+..
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~--~~~~F-~i~P~-------~g~L~pg~~~~i~V~F~P-~~~g~~~~~ 99 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIK--TCRPF-SIEPA-------IGTLNVGESMQLEVEFEP-QSVGDHSGR 99 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEE--CCTTE-EEESS-------EEEECTTCEEEEEEEECC-SSSBCCCCB
T ss_pred CeEEEEEEEEECCCCCEEEEEe--cCCCe-EEECC-------cCEECCCCEEEEEEEEEc-CCCccEEEE
Confidence 3567899999999987753222 11111 12243 256899999999999999 556555443
No 26
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=67.71 E-value=9.7 Score=34.42 Aligned_cols=55 Identities=18% Similarity=0.289 Sum_probs=34.6
Q ss_pred EEEEEEEeCCCCC----cceEEEEEEeCCCCC------CCcccc--------cccccceecCCCCeEEEEEEec
Q 004190 671 GVQVDVKNVGSKD----GAHTLLVFSTPPAGH------WAPHKQ--------LVAFEKVHVPAGAQQRVGINIH 726 (770)
Q Consensus 671 ~v~v~VtNtG~~~----G~eVvQlYv~~~~~~------~~P~k~--------L~gF~kv~L~pGes~~V~~~l~ 726 (770)
+|+++++|+|+.+ |.++|-.=-.+.... ..|.+. ...-.+ .|.|||+.+|+|+.+
T Consensus 28 ~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~-~l~pGes~~vtf~~~ 100 (125)
T 3fsa_A 28 QFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTK-LIGSGEKDSVTFDVS 100 (125)
T ss_dssp EEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECC-CBCTTCEEEEEEEGG
T ss_pred EEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccc-eeCCCcEEEEEEeCc
Confidence 6789999999998 999887622111110 012111 111122 289999999999987
No 27
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=66.55 E-value=4.8 Score=38.37 Aligned_cols=15 Identities=7% Similarity=0.240 Sum_probs=13.4
Q ss_pred ecCCCCeEEEEEEec
Q 004190 712 HVPAGAQQRVGINIH 726 (770)
Q Consensus 712 ~L~pGes~~V~~~l~ 726 (770)
.|.|||+.+|+|+++
T Consensus 125 ~l~pGet~svtf~~~ 139 (167)
T 3ay2_A 125 LIGGGEESSLTLDPA 139 (167)
T ss_dssp CBCTTCEEEEEECGG
T ss_pred eeCCCCEEEEEEecC
Confidence 479999999999876
No 28
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=65.31 E-value=11 Score=34.17 Aligned_cols=64 Identities=14% Similarity=0.167 Sum_probs=34.9
Q ss_pred EEEEEEEeCCCCC----cceEEEEEEeCCCC-----C-CCccc--------ccccccceecCCCCeEEEEEEec---cCC
Q 004190 671 GVQVDVKNVGSKD----GAHTLLVFSTPPAG-----H-WAPHK--------QLVAFEKVHVPAGAQQRVGINIH---VCK 729 (770)
Q Consensus 671 ~v~v~VtNtG~~~----G~eVvQlYv~~~~~-----~-~~P~k--------~L~gF~kv~L~pGes~~V~~~l~---~~~ 729 (770)
+|+|+++|+|... +.++|-.=-..... . ..|.+ +..... ..|.|||+.+|+|+.+ +..
T Consensus 28 ~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t-~~l~pGet~svtf~~~~l~~G~ 106 (128)
T 1nwp_A 28 TFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHT-KVIGAGEKDSVTFDVSKLAAGE 106 (128)
T ss_dssp EEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEEC-CCBCTTCEEEEEEEGGGSCTTS
T ss_pred EEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheee-eeeCCCCEEEEEEeccccCCCc
Confidence 5789999999886 77765421100000 0 00000 001111 1489999999999986 212
Q ss_pred CeeEEe
Q 004190 730 YLSVVD 735 (770)
Q Consensus 730 ~ls~~d 735 (770)
+..||-
T Consensus 107 ~Y~f~C 112 (128)
T 1nwp_A 107 KYGFFC 112 (128)
T ss_dssp CEEEEC
T ss_pred eEEEEE
Confidence 356654
No 29
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=59.00 E-value=16 Score=33.04 Aligned_cols=15 Identities=13% Similarity=0.355 Sum_probs=13.6
Q ss_pred ecCCCCeEEEEEEec
Q 004190 712 HVPAGAQQRVGINIH 726 (770)
Q Consensus 712 ~L~pGes~~V~~~l~ 726 (770)
.|.|||+.+|+|+.+
T Consensus 86 ~l~pGet~svtf~~~ 100 (129)
T 2ccw_A 86 VIGGGESDSVTFDVS 100 (129)
T ss_dssp CBCTTCEEEEEEEGG
T ss_pred EECCCCEEEEEEecc
Confidence 479999999999986
No 30
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=51.23 E-value=26 Score=37.49 Aligned_cols=56 Identities=16% Similarity=0.200 Sum_probs=34.0
Q ss_pred ceeEEEEEEEEeCCCCCcceEEEE--EEeCCC--------C-CCCcccccc---c--ccceecCCCCeEEEEEEecc
Q 004190 667 RLTLGVQVDVKNVGSKDGAHTLLV--FSTPPA--------G-HWAPHKQLV---A--FEKVHVPAGAQQRVGINIHV 727 (770)
Q Consensus 667 ~~~~~v~v~VtNtG~~~G~eVvQl--Yv~~~~--------~-~~~P~k~L~---g--F~kv~L~pGes~~V~~~l~~ 727 (770)
+.+++++++|||+|+-+ ||| |-.... . ......+|. | =.. -++|||+++++++++-
T Consensus 297 gR~l~~~~~VtN~g~~p----vrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~s~~-pI~PGETrt~~V~a~d 368 (419)
T 3rfr_A 297 GRELTINVKVKNGTSQP----VRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLSNDD-VIAPGESKEIVVKIQD 368 (419)
T ss_dssp SSEEEEEEEEECCSSSC----BEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCCCCC-CBCTTCEEEEEEEEEC
T ss_pred CcEEEEEEEEecCCCCc----eEEeeEEEccEEEeCcccccCCCCCchhhhhccCCCCCC-CcCCCcceEEEEEeeh
Confidence 46899999999998744 344 221111 0 111122332 2 333 6999999999998764
No 31
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=50.68 E-value=13 Score=45.05 Aligned_cols=59 Identities=24% Similarity=0.313 Sum_probs=38.4
Q ss_pred eeEEEEEEEEeCCCCCcceEEEEEEeC--CCCC---CCcccccccc--cceecCCCCeEEEEEEecc
Q 004190 668 LTLGVQVDVKNVGSKDGAHTLLVFSTP--PAGH---WAPHKQLVAF--EKVHVPAGAQQRVGINIHV 727 (770)
Q Consensus 668 ~~~~v~v~VtNtG~~~G~eVvQlYv~~--~~~~---~~P~k~L~gF--~kv~L~pGes~~V~~~l~~ 727 (770)
..++++++|||+|+.+...+.++-+.. +... ..|. .|.-+ .++.|+|||+++++++++.
T Consensus 499 ~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~-~l~~~~~~~vtv~ag~~~~~~vt~~~ 564 (926)
T 1xf1_A 499 DKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPK-VLYETSWQKITIPANSSKQVTVPIDA 564 (926)
T ss_dssp SEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEE-EEEECCCEEEEECTTEEEEEEEEEEC
T ss_pred ccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccc-eeEeccCCeEEECCCCEEEEEEEEEc
Confidence 368899999999986654443333321 2221 2353 34322 4578999999999999986
No 32
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=47.81 E-value=22 Score=34.94 Aligned_cols=51 Identities=20% Similarity=0.092 Sum_probs=30.6
Q ss_pred EEEEEEEEeCCCCCcceEEEEEEeCCCCCCCc-----ccccccc-------cceecCCCCeEEEEEE
Q 004190 670 LGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAP-----HKQLVAF-------EKVHVPAGAQQRVGIN 724 (770)
Q Consensus 670 ~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~P-----~k~L~gF-------~kv~L~pGes~~V~~~ 724 (770)
-+++++|+|||+|+ ||+=-+...-...| ...=.|| .-|..+|||+++|++.
T Consensus 125 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 187 (225)
T 3qga_A 125 EITELKVTNKGPKS----LHVGSHFHFFEANRALEFDREKAYGKRLDIPSGNTLRIGAGETKTVHLI 187 (225)
T ss_dssp CCEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred ceEEEEEEECCCCc----eeeccccchhhcCchhhccHHHhCCcccccCCCCeEeeCCCCeeEEEEE
Confidence 35789999999987 66633322111111 1111122 3467799999999884
No 33
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=46.50 E-value=34 Score=30.87 Aligned_cols=17 Identities=6% Similarity=-0.050 Sum_probs=13.8
Q ss_pred ceecCCCCeEEEEEEec
Q 004190 710 KVHVPAGAQQRVGINIH 726 (770)
Q Consensus 710 kv~L~pGes~~V~~~l~ 726 (770)
...|.|||+.+++|+.+
T Consensus 98 t~~l~pGet~~v~f~~~ 114 (139)
T 2aan_A 98 SPLANGNETVEVTFTAP 114 (139)
T ss_dssp CCCBCTTCEEEEEEECC
T ss_pred ccccCCCCEEEEEEECC
Confidence 34589999999998875
No 34
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=43.73 E-value=22 Score=35.13 Aligned_cols=50 Identities=22% Similarity=0.202 Sum_probs=30.7
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCCCc-----ccccccc-------cceecCCCCeEEEEEE
Q 004190 671 GVQVDVKNVGSKDGAHTLLVFSTPPAGHWAP-----HKQLVAF-------EKVHVPAGAQQRVGIN 724 (770)
Q Consensus 671 ~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~P-----~k~L~gF-------~kv~L~pGes~~V~~~ 724 (770)
+++++|+|||+|+ ||+=-+...-...| ...=.|| .-|..+||++++|++.
T Consensus 126 ~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTAVRFEPG~~r~V~LV 187 (238)
T 1e9y_A 126 AVSVKVKNVGDRP----VQIGSHFHFFEVNRCLDFDREKTFGKRLDIAAGTAVRFEPGEEKSVELI 187 (238)
T ss_dssp CCEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSSTTCEEEECTTCEEEEEEE
T ss_pred eEEEEEEeCCCCc----eEeccccchHhcCccccccHHHhCCcccCcCCCCeEeeCCCCeeEEEEE
Confidence 5789999999987 67643322211111 1112222 3567799999999984
No 35
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=42.63 E-value=24 Score=35.29 Aligned_cols=55 Identities=13% Similarity=0.134 Sum_probs=35.1
Q ss_pred EEeCCCCCcceEEEEEEeCCCCC--CC--------cccccccccceecCCCCeEEEEEEeccCCCeeEEeC
Q 004190 676 VKNVGSKDGAHTLLVFSTPPAGH--WA--------PHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDR 736 (770)
Q Consensus 676 VtNtG~~~G~eVvQlYv~~~~~~--~~--------P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~ 736 (770)
+-|-|. |.=+|+||.+.+... .. -.+.+..+.++.|.||||-+ |.+.-.-.||-+
T Consensus 131 iinRgG--G~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiT----l~Pg~~H~F~ae 195 (246)
T 3kmh_A 131 IINRGG--GNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESIC----LPPGLYHSFWAE 195 (246)
T ss_dssp EEEEEE--SCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEE----ECTTEEEEEEEC
T ss_pred EEecCC--CeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEe----cCCCCEEEEEec
Confidence 445543 567788898876631 11 24678889999999999855 555222244433
No 36
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=41.65 E-value=6.6 Score=40.98 Aligned_cols=58 Identities=17% Similarity=0.331 Sum_probs=34.9
Q ss_pred HHhhccCEEEEEeCCCccccccccccCCCCCChh--HHHHHHHHHhhCCCCEEEEEecCCeeeec
Q 004190 473 DASRQADATILVMGLDQSIEAEALDRAGLLLPGR--QQELVSKVSMASKGPTILVLMSGGPIDVA 535 (770)
Q Consensus 473 ~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp~~--q~~li~~v~~~~~~pvIvVl~~g~P~~l~ 535 (770)
+..++||+||++.|... .+|.+|.+|--... =.++++++.+.+++-+|+ ..+||++..
T Consensus 65 ~~~~~aDvVvitAG~pr---kpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivl--vvsNPvd~~ 124 (294)
T 2x0j_A 65 SLLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKIL--VVTNPMDVM 124 (294)
T ss_dssp GGGTTCSEEEECCCCCC---CSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEE--ECSSSHHHH
T ss_pred HHhCCCCEEEEecCCCC---CCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEE--EecCcchhh
Confidence 35789999999988654 55666655421000 134566676666654433 346899863
No 37
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=39.56 E-value=68 Score=29.21 Aligned_cols=55 Identities=11% Similarity=0.040 Sum_probs=32.9
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCC-CCCCccccccc-ccceecCCCCeEEEEEEecc
Q 004190 669 TLGVQVDVKNVGSKDGAHTLLVFSTPPA-GHWAPHKQLVA-FEKVHVPAGAQQRVGINIHV 727 (770)
Q Consensus 669 ~~~v~v~VtNtG~~~G~eVvQlYv~~~~-~~~~P~k~L~g-F~kv~L~pGes~~V~~~l~~ 727 (770)
..+-+++|+|||.+...=-. ..+. ........|.= =.+-.|.|||+..|++++..
T Consensus 44 ~~~~~l~I~Ntg~vpa~F~f----~~~~~~~~~~~~wl~v~P~~G~L~Pge~~~I~v~~~v 100 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPCHFSF----IPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYV 100 (140)
T ss_dssp CEEEEEEEEECSSSCEEEEE----ECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECB
T ss_pred eeeeEEEEEcCCccceEEEE----ecCCCchhhhhHhhhcCCcccccCCCCeeEEEEEEEE
Confidence 45779999999998764322 2221 10000000100 02347999999999999986
No 38
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=36.63 E-value=96 Score=31.39 Aligned_cols=54 Identities=15% Similarity=0.133 Sum_probs=35.1
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCCCcccccccccc----eecCCCCeEEEEEEec
Q 004190 671 GVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEK----VHVPAGAQQRVGINIH 726 (770)
Q Consensus 671 ~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~P~k~L~gF~k----v~L~pGes~~V~~~l~ 726 (770)
.++++|+|+|+. --.||..+.+......|.+.=.-|-= ..|+||+++.|+|...
T Consensus 45 ~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~pg~~q~lRI~~~ 102 (257)
T 3q48_A 45 EVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIAYL 102 (257)
T ss_dssp EEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcCCEEEECCCCceEEEEEEC
Confidence 588999999986 67999999864321112111011221 2589999999999543
No 39
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=35.48 E-value=2e+02 Score=28.01 Aligned_cols=50 Identities=16% Similarity=0.133 Sum_probs=30.8
Q ss_pred eEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCcccccccc-cceecCCCCeEEEEEEeccC
Q 004190 669 TLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAF-EKVHVPAGAQQRVGINIHVC 728 (770)
Q Consensus 669 ~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~P~k~L~gF-~kv~L~pGes~~V~~~l~~~ 728 (770)
..+.+++++|+|+..=.=. ++ +.|.- ++.- .-..|+|||+.+++++++..
T Consensus 20 ~~~~~~~i~N~g~~pl~i~-~~--~~p~~-------~~~~~~~~~I~PG~~g~I~vt~~~~ 70 (220)
T 2qsv_A 20 EGVVRLVVNNTDESDLQVA-VV--SLPSF-------VSLDDRAFRLQAREPRELNLSLAVP 70 (220)
T ss_dssp CCEEEEEEEECSSSCEEEE-EE--ECCTT-------EECSCCEEEECSSSCEEEEEEECCC
T ss_pred cceEEEEEEeCCCCceEEE-ec--cCCCc-------eEeeeCcceeCCCCceEEEEEEcch
Confidence 4567999999998553211 11 11110 1110 12468999999999999873
No 40
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=35.13 E-value=72 Score=29.52 Aligned_cols=20 Identities=20% Similarity=0.094 Sum_probs=13.0
Q ss_pred EEEEEEEeCCCCCcceEEEE
Q 004190 671 GVQVDVKNVGSKDGAHTLLV 690 (770)
Q Consensus 671 ~v~v~VtNtG~~~G~eVvQl 690 (770)
+|+++++|.|+.....++..
T Consensus 70 ~V~~~~tN~~~~~~H~~~i~ 89 (154)
T 2cal_A 70 TVDVTFINTNKGFGHSFDIT 89 (154)
T ss_dssp EEEEEEEECCTTCCCCCEEE
T ss_pred EEEEEEEcCCCCeeeEEEEe
Confidence 67889999865444554433
No 41
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=34.96 E-value=66 Score=31.52 Aligned_cols=52 Identities=17% Similarity=0.242 Sum_probs=34.4
Q ss_pred eeEEEEEEEEeCCCCCcceEEEEEEeCCCCCCCcccccccccceecCCCCeEEEEEEecc
Q 004190 668 LTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIHV 727 (770)
Q Consensus 668 ~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 727 (770)
...+.+++++|+|+..-. +..+-.+... . ...+.|-.|+|||+.+|+++++.
T Consensus 134 ~~~~~~f~i~N~G~~pL~-I~~v~~scgc--t-----~~~~~~~~i~PGe~~~i~v~~~~ 185 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLR-LHSVTTRNPA--L-----TAVPDRTEIKPGGSTLLRIAVDP 185 (220)
T ss_dssp SCEEEEEEEEECSSSCEE-EEEEEECSTT--E-----EEEESCSEECTTCEEEEEEEECH
T ss_pred CeEEEEEEEEECCCCCEE-EEEEEeCCCC--E-----eeecCCccCCCCCEEEEEEEEec
Confidence 467889999999986432 2222222211 1 11245677999999999999987
No 42
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=34.79 E-value=44 Score=29.82 Aligned_cols=67 Identities=10% Similarity=0.113 Sum_probs=42.6
Q ss_pred cccccccccceecCCCCeEEEEEEeccC-----------CCeeEEeCCCcE-------EeeCeEEEE---EEeCCCCeEE
Q 004190 701 PHKQLVAFEKVHVPAGAQQRVGINIHVC-----------KYLSVVDRSGTR-------RIPLGEHNI---HIGGTKHSVS 759 (770)
Q Consensus 701 P~k~L~gF~kv~L~pGes~~V~~~l~~~-----------~~ls~~d~~~~~-------~~~~G~y~~---~vG~ss~~~~ 759 (770)
|--.+..-.|.-|.||||.+|++-+.-- +....++-.|.| ...||+|.= +-|.++..+.
T Consensus 48 pDLtvisiDk~vL~PGESA~it~IvKDid~nPIn~v~i~~~~~~~~~~g~Wd~g~~Kkg~~PGeY~q~iTY~G~s~~~i~ 127 (146)
T 2lv4_A 48 PDLTVMSIDKSVLSPGESATITTIVKDIDGNPVNEVHINKTVARENLKGLWDYGPLKKENVPGKYTQVITYRGHSNERID 127 (146)
T ss_dssp GGGCEEECCCCCBCTTCEEEEEEECBBTTSCBCCCCCCBCCEECSCSSSEEEECCCEECSSSSEEEEEEEEETTCCCEEE
T ss_pred CCcEEEecCccccCCCcceEEEEEEEeCCCCcccceeeeeeeeccccccceeecceecCCCCcceEEEEEEcCCCCceEE
Confidence 4445667788889999999999854310 011111222344 446899975 4578888888
Q ss_pred EEEEeccc
Q 004190 760 LHAATLGV 767 (770)
Q Consensus 760 ~~~~~~~~ 767 (770)
++.+-.|.
T Consensus 128 l~yky~g~ 135 (146)
T 2lv4_A 128 ISFKYAMS 135 (146)
T ss_dssp EEEECSTT
T ss_pred EEeeeeee
Confidence 88865443
No 43
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=34.74 E-value=93 Score=30.65 Aligned_cols=53 Identities=19% Similarity=0.080 Sum_probs=34.6
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCC---CCcccccccccceecCCCCeEEEEEEecc
Q 004190 671 GVQVDVKNVGSKDGAHTLLVFSTPPAGH---WAPHKQLVAFEKVHVPAGAQQRVGINIHV 727 (770)
Q Consensus 671 ~v~v~VtNtG~~~G~eVvQlYv~~~~~~---~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 727 (770)
.++++|+|+|+. --.||..|.+.... ..|..-.==. ..|+||+.+.|+|....
T Consensus 29 ~~sl~l~N~~~~--p~LvQswv~~~~~~~~~~~pFivtPPl--~Rl~p~~~q~lRI~~~~ 84 (218)
T 4ay0_A 29 GVMVSVKNTQDY--PVLIQSRIYDENKEKESEDPFVVTPPL--FRLDAKQQNSLRIAQAG 84 (218)
T ss_dssp CEEEEEECCSSS--CEEEEEEEECTTSCCCSSCSEEEESSE--EEECTTCEEEEEEEECS
T ss_pred EEEEEEEcCCCC--CEEEEEEEecCCCCccccCCEEECCCe--EEeCCCCceEEEEEecC
Confidence 578999999976 47999999764431 1121110000 35899999999996543
No 44
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=34.26 E-value=23 Score=37.40 Aligned_cols=58 Identities=19% Similarity=0.322 Sum_probs=29.0
Q ss_pred HHhhccCEEEEEeCCCccccccccccCCCCCC--hhHHHHHHHHHhhCCCCEEEEEecCCeeeec
Q 004190 473 DASRQADATILVMGLDQSIEAEALDRAGLLLP--GRQQELVSKVSMASKGPTILVLMSGGPIDVA 535 (770)
Q Consensus 473 ~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp--~~q~~li~~v~~~~~~pvIvVl~~g~P~~l~ 535 (770)
++.++||+||++.|... .+|.+|.+|--- .--.++.+++.+.+++- ++ ++.+||+++.
T Consensus 72 ~a~~~aDiVvi~ag~~~---kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a-~i-lvvtNPvdi~ 131 (326)
T 3vku_A 72 SDAKDADLVVITAGAPQ---KPGETRLDLVNKNLKILKSIVDPIVDSGFNG-IF-LVAANPVDIL 131 (326)
T ss_dssp GGGTTCSEEEECCCCC-------------------CHHHHHHHHHTTTCCS-EE-EECSSSHHHH
T ss_pred HHhcCCCEEEECCCCCC---CCCchHHHHHHHHHHHHHHHHHHHHhcCCce-EE-EEccCchHHH
Confidence 46789999999888543 456677665211 11345666776655543 33 3446898863
No 45
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=33.50 E-value=50 Score=29.12 Aligned_cols=43 Identities=21% Similarity=0.214 Sum_probs=23.3
Q ss_pred ecCCCCeEEEEEEeccCCCeeEEeCC---------------CcE--Eee-CeEEEEEEeCC
Q 004190 712 HVPAGAQQRVGINIHVCKYLSVVDRS---------------GTR--RIP-LGEHNIHIGGT 754 (770)
Q Consensus 712 ~L~pGes~~V~~~l~~~~~ls~~d~~---------------~~~--~~~-~G~y~~~vG~s 754 (770)
.+++||+-+|+++-.....|.+++.. +.| +++ .|+|+|.|...
T Consensus 35 ~a~aGQ~l~V~ls~~~~~~f~I~~P~~~~~~~l~~g~~~~~~~~~g~LP~sG~Y~i~V~~~ 95 (114)
T 4dzg_A 35 VAXAGQTMTVXIGGSSNANFNVFAPGAQPGQAEAIGRNDGDGQWQGALPASGXYLIQVYQM 95 (114)
T ss_dssp CC-CCCEEEC-CEESTTCEEEEECTTCCTTTSCCSEECCTTSCCEEECSSCC-CEEEEECC
T ss_pred EecCCCEEEEEeCCCCcEEEEEECCCCCcccceeccccCCcceEEEEecCCCcEEEEEEec
Confidence 34677776666643332224444332 268 554 79999999964
No 46
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=33.01 E-value=83 Score=26.40 Aligned_cols=16 Identities=19% Similarity=0.397 Sum_probs=12.6
Q ss_pred eecCCCCeEEEEEEec
Q 004190 711 VHVPAGAQQRVGINIH 726 (770)
Q Consensus 711 v~L~pGes~~V~~~l~ 726 (770)
..|.||++.+++|+.+
T Consensus 61 ~~~~pg~~~~~~~t~~ 76 (100)
T 4hci_A 61 VVVESGKEKNITVKPK 76 (100)
T ss_dssp EEECTTCEEEEEECCC
T ss_pred eeecCCcceeEEEecc
Confidence 4689999988887654
No 47
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=32.96 E-value=55 Score=28.12 Aligned_cols=40 Identities=15% Similarity=0.184 Sum_probs=25.2
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCCCCcccccccccceecCCCCeEEEEEEec
Q 004190 671 GVQVDVKNVGSKDGAHTLLVFSTPPAGHWAPHKQLVAFEKVHVPAGAQQRVGINIH 726 (770)
Q Consensus 671 ~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~ 726 (770)
+|++.++|.+.. ... +.+ |. + |+ +..+.|||+.+++|+.+
T Consensus 47 ~V~~~~~n~d~~-~H~---~~i--------~~--~-~~-~~~i~pG~~~~~~f~~~ 86 (112)
T 1iby_A 47 AVKVVVENKSPI-SEG---FSI--------DA--F-GV-QEVIKAGETKTISFTAD 86 (112)
T ss_dssp EEEEEEEECSSS-CEE---EEE--------GG--G-TE-EEEECTTCEEEEEEECC
T ss_pred EEEEEEEECCCC-eEE---EEE--------cC--C-Cc-eeEeCCCCEEEEEEECC
Confidence 577888999754 111 111 11 1 22 56799999999999754
No 48
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=30.09 E-value=84 Score=28.15 Aligned_cols=26 Identities=15% Similarity=0.048 Sum_probs=19.9
Q ss_pred eecCCCCeEEEEEEeccCCCeeEEeCCCcEEeeCeEEEEEEe
Q 004190 711 VHVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPLGEHNIHIG 752 (770)
Q Consensus 711 v~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G~y~~~vG 752 (770)
..|.|||+.+++|+++. +|.|.++-+
T Consensus 98 ~~l~pG~~~~~~~~~~~----------------~G~y~f~C~ 123 (140)
T 1qhq_A 98 AMLNAGESGSVTFRTPA----------------PGTYLYICT 123 (140)
T ss_dssp CCBCTTEEEEEEEECCS----------------SEEEEEECC
T ss_pred eeeCCCceeEEEEEeCC----------------CeeEEEEeC
Confidence 45899999999888753 577777665
No 49
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=28.28 E-value=1e+02 Score=30.91 Aligned_cols=52 Identities=13% Similarity=0.022 Sum_probs=33.5
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCC-CCcccccccccceecCCCCeEEEEEEec
Q 004190 671 GVQVDVKNVGSKDGAHTLLVFSTPPAGH-WAPHKQLVAFEKVHVPAGAQQRVGINIH 726 (770)
Q Consensus 671 ~v~v~VtNtG~~~G~eVvQlYv~~~~~~-~~P~k~L~gF~kv~L~pGes~~V~~~l~ 726 (770)
.++++|+|+|+. --.||..+.+.... ..|....==. ..|+||+.+.|+|...
T Consensus 39 ~~sl~l~N~~~~--P~LvQsWv~~~~~~~~~pfivtPPl--fRlep~~~q~lRIi~~ 91 (239)
T 4djm_A 39 GETLTVINDQDY--PMLVQSEVLSEDQKSPAPFVVTPPL--FRLDGQQSSRLRIVRT 91 (239)
T ss_dssp CEEEEEEECSSS--CEEEEEEEECTTSSSBCSEEEESSE--EEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCC--cEEEEEEEEcCCCCccCCEEEcCCe--EEECCCCceEEEEEEC
Confidence 468899999976 47999999864331 1121000000 3589999999999643
No 50
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=28.16 E-value=2.9e+02 Score=31.53 Aligned_cols=79 Identities=13% Similarity=0.115 Sum_probs=47.9
Q ss_pred eeEEEEEEEEeCCCCCcceEEEEEEeCCCCC---CCcccccccccceecCCCCeEEEEEEeccCCCeeEEeCCCcEEeeC
Q 004190 668 LTLGVQVDVKNVGSKDGAHTLLVFSTPPAGH---WAPHKQLVAFEKVHVPAGAQQRVGINIHVCKYLSVVDRSGTRRIPL 744 (770)
Q Consensus 668 ~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~---~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~ 744 (770)
.+.+++-+|||.|..++...+ =+..|.++ ..|.+ |. | =+.||++++++++.. . .++.|. -
T Consensus 537 ~~~t~~rtvtnvg~~~~ty~~--~v~~p~gv~v~V~P~~-l~-f----~~~~~~~~~~vt~~~-~------~~~~~~--~ 599 (621)
T 3vta_A 537 FNQYFNRTLTSVAPQASTYRA--MISAPQGLTISVNPNV-LS-F----NGLGDRKSFTLTVRG-S------IKGFVV--S 599 (621)
T ss_dssp EEEEEEEEEEECSSSCEEEEE--EEECCSSEEEEEESSE-EE-E----CSTTCEEEEEEEEEE-C------CCSSEE--E
T ss_pred eEEEEEEEEEccCCCCeEEEE--EEECCCCcEEEEecCE-EE-E----cCCCcEEEEEEEEEe-c------CCCceE--E
Confidence 467888899999986654444 45566552 23542 21 2 267999888888764 2 234443 2
Q ss_pred eEEEEEEeCCCCeEEEEEEec
Q 004190 745 GEHNIHIGGTKHSVSLHAATL 765 (770)
Q Consensus 745 G~y~~~vG~ss~~~~~~~~~~ 765 (770)
|..++ .+..|.+|..+.++
T Consensus 600 g~l~w--~d~~h~Vr~Pi~v~ 618 (621)
T 3vta_A 600 ASLVW--SDGVHYVRSPITIT 618 (621)
T ss_dssp EEEEE--ECSSCCCEEEEEEE
T ss_pred EEEEE--EcCCEEEEeCEEEE
Confidence 55443 35567777777654
No 51
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=28.01 E-value=96 Score=30.59 Aligned_cols=52 Identities=15% Similarity=0.112 Sum_probs=33.9
Q ss_pred EEEEEEEeCCCCCcceEEEEEEeCCCCC-CCcccccccccceecCCCCeEEEEEEec
Q 004190 671 GVQVDVKNVGSKDGAHTLLVFSTPPAGH-WAPHKQLVAFEKVHVPAGAQQRVGINIH 726 (770)
Q Consensus 671 ~v~v~VtNtG~~~G~eVvQlYv~~~~~~-~~P~k~L~gF~kv~L~pGes~~V~~~l~ 726 (770)
.++++|+|+|+. --.+|..+.+.... ..|..-+=-. ..|+||+++.|+|...
T Consensus 29 ~~sl~l~N~~~~--p~LvQsWv~~~~~~~~~pfivtPPl--~rl~p~~~q~lRI~~~ 81 (221)
T 2co7_B 29 GATLSVSNPQNY--PILVQSSVKAADKSSPAPFLVMPPL--FRLEANQQSQLRIVRT 81 (221)
T ss_dssp CEEEEEECCSSS--CEEEEEEEEETTSSSBCSEEEESSE--EEECTTCEEEEEEEEC
T ss_pred EEEEEEEcCCCC--cEEEEEEEecCCCCccCCEEEeCCE--EEECCCCceEEEEEEC
Confidence 468889999975 67999999764321 1111000000 3589999999999654
No 52
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=26.97 E-value=17 Score=38.74 Aligned_cols=56 Identities=16% Similarity=0.244 Sum_probs=32.0
Q ss_pred HHhhccCEEEEEeCCCccccccccccCCCCCChhH----HHHHHHHHhhCCCCEEEEEecCCeeee
Q 004190 473 DASRQADATILVMGLDQSIEAEALDRAGLLLPGRQ----QELVSKVSMASKGPTILVLMSGGPIDV 534 (770)
Q Consensus 473 ~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp~~q----~~li~~v~~~~~~pvIvVl~~g~P~~l 534 (770)
++.++||+||++.|... .+|.+|.+|- ..- .++.+++.+...+.++ |+..+||++.
T Consensus 96 ~a~~~advVvi~aG~pr---kpGmtR~DLl--~~Na~I~~~~~~~i~~~a~~~~~-vlvvsNPvd~ 155 (345)
T 4h7p_A 96 VAFDGVAIAIMCGAFPR---KAGMERKDLL--EMNARIFKEQGEAIAAVAASDCR-VVVVGNPANT 155 (345)
T ss_dssp HHTTTCSEEEECCCCCC---CTTCCHHHHH--HHHHHHHHHHHHHHHHHSCTTCE-EEECSSSHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCCHHHHH--HHhHHHHHHHHHHHHhhccCceE-EEEeCCCcch
Confidence 46789999999887543 5566665541 111 2334455543333343 3345789875
No 53
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=26.67 E-value=21 Score=37.83 Aligned_cols=57 Identities=19% Similarity=0.277 Sum_probs=33.9
Q ss_pred HhhccCEEEEEeCCCccccccccccCCCCCCh--hHHHHHHHHHhhCCCCEEEEEecCCeeeec
Q 004190 474 ASRQADATILVMGLDQSIEAEALDRAGLLLPG--RQQELVSKVSMASKGPTILVLMSGGPIDVA 535 (770)
Q Consensus 474 ~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp~--~q~~li~~v~~~~~~pvIvVl~~g~P~~l~ 535 (770)
..++||++|++.|... .+|.+|.+|---. --.++.+++.+.+++ .+ +++.+||+++.
T Consensus 84 ~~~~aDiVvi~aG~~~---kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~-a~-vlvvtNPvdi~ 142 (331)
T 4aj2_A 84 VTANSKLVIITAGARQ---QEGESRLNLVQRNVNIFKFIIPNVVKYSPQ-CK-LLIVSNPVDIL 142 (331)
T ss_dssp GGTTEEEEEECCSCCC---CTTCCGGGGHHHHHHHHHHHHHHHHHHCTT-CE-EEECSSSHHHH
T ss_pred HhCCCCEEEEccCCCC---CCCccHHHHHHHHHHHHHHHHHHHHHHCCC-eE-EEEecChHHHH
Confidence 5789999999988643 4666776542111 113455566665544 33 34456898863
No 54
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=26.08 E-value=16 Score=37.94 Aligned_cols=58 Identities=14% Similarity=0.295 Sum_probs=32.9
Q ss_pred HHhhccCEEEEEeCCCccccccccccCCCCCCh--hHHHHHHHHHhhCCCCEEEEEecCCeeeec
Q 004190 473 DASRQADATILVMGLDQSIEAEALDRAGLLLPG--RQQELVSKVSMASKGPTILVLMSGGPIDVA 535 (770)
Q Consensus 473 ~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp~--~q~~li~~v~~~~~~pvIvVl~~g~P~~l~ 535 (770)
++.++||++|++.|... .+|.+|.++-.-. --.++++++.+.+++ .+++ +.+||+++.
T Consensus 65 ~a~~~aDiVViaag~~~---kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~-a~ii-vvsNPvd~~ 124 (294)
T 1oju_A 65 SLLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVENAPE-SKIL-VVTNPMDVM 124 (294)
T ss_dssp GGGTTCSEEEECCCCCC---CSSCCHHHHHHHHHHHHHHHHHHHHTTSTT-CEEE-ECSSSHHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHhhCCC-eEEE-EeCCcchHH
Confidence 46789999999988643 4455554431100 113445566655444 3433 346899873
No 55
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=25.73 E-value=29 Score=36.68 Aligned_cols=57 Identities=12% Similarity=0.075 Sum_probs=34.1
Q ss_pred HhhccCEEEEEeCCCccccccccccCCCCCChh--HHHHHHHHHhhCCCCEEEEEecCCeeeec
Q 004190 474 ASRQADATILVMGLDQSIEAEALDRAGLLLPGR--QQELVSKVSMASKGPTILVLMSGGPIDVA 535 (770)
Q Consensus 474 ~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp~~--q~~li~~v~~~~~~pvIvVl~~g~P~~l~ 535 (770)
..++||+||++.|... .+|.+|.++-.-.. -.++++++.+.+++ .++ ++.+||+++.
T Consensus 86 ~~~daDiVIitaG~p~---kpG~tR~dll~~N~~I~k~i~~~I~k~~P~-a~i-lvvtNPvdi~ 144 (330)
T 3ldh_A 86 VSAGSKLVVITAGARQ---QEGESRLNLVQRNVNIFKFIIPNIVKHSPD-CLK-ELHPELGTDK 144 (330)
T ss_dssp SCSSCSEEEECCSCCC---CSSCCTTGGGHHHHHHHHHHHHHHHHHCTT-CEE-EECSSSHHHH
T ss_pred HhCCCCEEEEeCCCCC---CCCCCHHHHHHhhHHHHHHHHHHHHhhCCC-ceE-EeCCCccHHH
Confidence 3788999999988653 56667765421111 13455566665544 333 4446898773
No 56
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=25.45 E-value=18 Score=37.85 Aligned_cols=58 Identities=21% Similarity=0.354 Sum_probs=32.7
Q ss_pred HHhhccCEEEEEeCCCccccccccccCCCCCC--hhHHHHHHHHHhhCCCCEEEEEecCCeeeec
Q 004190 473 DASRQADATILVMGLDQSIEAEALDRAGLLLP--GRQQELVSKVSMASKGPTILVLMSGGPIDVA 535 (770)
Q Consensus 473 ~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp--~~q~~li~~v~~~~~~pvIvVl~~g~P~~l~ 535 (770)
+..+++|+||++.|... .+|.+|.+|--- .--.++.+++.+.+++- ++ ++.+||+++.
T Consensus 65 ~~~~~aDivii~ag~~r---kpG~~R~dll~~N~~I~~~i~~~i~~~~p~a-~v-lvvtNPvd~~ 124 (312)
T 3hhp_A 65 PALEGADVVLISAGVAR---KPGMDRSDLFNVNAGIVKNLVQQVAKTCPKA-CI-GIITNPVNTT 124 (312)
T ss_dssp HHHTTCSEEEECCSCSC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTS-EE-EECSSCHHHH
T ss_pred HHhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCc-EE-EEecCcchhH
Confidence 46789999999888643 455555443100 01134455565555543 33 3347898763
No 57
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=25.20 E-value=39 Score=35.71 Aligned_cols=59 Identities=19% Similarity=0.256 Sum_probs=33.9
Q ss_pred HHhhccCEEEEEeCCCccccccccccCCCCCCh--hHHHHHHHHHhhCCCCEEEEEecCCeeeec
Q 004190 473 DASRQADATILVMGLDQSIEAEALDRAGLLLPG--RQQELVSKVSMASKGPTILVLMSGGPIDVA 535 (770)
Q Consensus 473 ~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp~--~q~~li~~v~~~~~~pvIvVl~~g~P~~l~ 535 (770)
+..+++|+||++.|... .+|.+|.+|--.. --.++++++.+..++-+++ ++.+||+++.
T Consensus 75 ~~~~daDvVvitAg~pr---kpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~v-ivvsNPvd~~ 135 (333)
T 5mdh_A 75 IAFKDLDVAILVGSMPR---RDGMERKDLLKANVKIFKCQGAALDKYAKKSVKV-IVVGNPANTN 135 (333)
T ss_dssp HHTTTCSEEEECCSCCC---CTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEE-EECSSSHHHH
T ss_pred HHhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEE-EEcCCchHHH
Confidence 46789999998877543 4566775542100 1234556666655443323 3346898773
No 58
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=24.98 E-value=1.2e+02 Score=30.43 Aligned_cols=62 Identities=10% Similarity=0.013 Sum_probs=39.4
Q ss_pred ceeEEEEEEEEeCCCCCcceEEEEEEeCCCCC-CCcccccccc-cceecCCCCeEEEEEEeccCCCee
Q 004190 667 RLTLGVQVDVKNVGSKDGAHTLLVFSTPPAGH-WAPHKQLVAF-EKVHVPAGAQQRVGINIHVCKYLS 732 (770)
Q Consensus 667 ~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~-~~P~k~L~gF-~kv~L~pGes~~V~~~l~~~~~ls 732 (770)
++.+.+.++|-|..+..-+--|+|...+.... ..+. ..+ +++.|.||+++.|.|.|.+ ..+.
T Consensus 95 GE~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~---~~~~~~v~v~a~~~~~v~f~i~p-~~~G 158 (252)
T 3hrz_B 95 NEQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKG---QRYRQQFPIKALSSRAVPFVIVP-LEQG 158 (252)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSS---CCEEEEEEECTTEEEEEEEEEEE-CSSE
T ss_pred CCEEEEEEEEEcccCceEEEEEEEEcCCceEeecCCC---CceEEEEEECCCCeEEEEEEEEe-ccCC
Confidence 46899999999998766444455544332211 1111 112 3467999999999999987 3343
No 59
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=24.97 E-value=19 Score=38.07 Aligned_cols=58 Identities=22% Similarity=0.322 Sum_probs=33.1
Q ss_pred HHhhccCEEEEEeCCCccccccccccCCCCCC--hhHHHHHHHHHhhCCCCEEEEEecCCeeeec
Q 004190 473 DASRQADATILVMGLDQSIEAEALDRAGLLLP--GRQQELVSKVSMASKGPTILVLMSGGPIDVA 535 (770)
Q Consensus 473 ~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp--~~q~~li~~v~~~~~~pvIvVl~~g~P~~l~ 535 (770)
++.++||++|++.|... .+|.+|.+|-.- .--.++++++.+.+++ .+ +++.+||+++.
T Consensus 69 ~a~~~aDvVvi~ag~p~---kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~-a~-vlvvtNPvd~~ 128 (326)
T 3pqe_A 69 EDCKDADIVCICAGANQ---KPGETRLELVEKNLKIFKGIVSEVMASGFD-GI-FLVATNPVDIL 128 (326)
T ss_dssp GGGTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHTTCC-SE-EEECSSSHHHH
T ss_pred HHhCCCCEEEEecccCC---CCCccHHHHHHHHHHHHHHHHHHHHHhcCC-eE-EEEcCChHHHH
Confidence 46789999999988643 345555433100 0123455666655544 33 34456898873
No 60
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=24.97 E-value=1.3e+02 Score=31.88 Aligned_cols=57 Identities=11% Similarity=-0.018 Sum_probs=34.1
Q ss_pred eeEEEEEEEEeCCCCCcceEEEEEEeCC-CCCCCcccccccc-cceecCCCCeEEEEEEeccC
Q 004190 668 LTLGVQVDVKNVGSKDGAHTLLVFSTPP-AGHWAPHKQLVAF-EKVHVPAGAQQRVGINIHVC 728 (770)
Q Consensus 668 ~~~~v~v~VtNtG~~~G~eVvQlYv~~~-~~~~~P~k~L~gF-~kv~L~pGes~~V~~~l~~~ 728 (770)
...+-+++|+|||.+...= -+..+ .....+...|.=. .+-.|.|||+..|++++...
T Consensus 46 ~~~~~~l~i~N~g~~pa~f----~f~~~~~~~~~~~~wl~v~p~~g~l~Pge~~~i~l~~~v~ 104 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHF----SFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYVS 104 (366)
T ss_dssp CCEEEEEEEEECSSSCEEE----EEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECBC
T ss_pred CeEEEEEEEEecCCceEEE----EEEeCCCCCCCCCCcEEEeCCccEECCCCEEEEEEEEEEC
Confidence 3577899999999886532 22222 1111111111111 23479999999999999873
No 61
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=24.60 E-value=19 Score=37.85 Aligned_cols=58 Identities=14% Similarity=0.360 Sum_probs=33.7
Q ss_pred HHhhccCEEEEEeCCCccccccccccCCCCCC--hhHHHHHHHHHhhCCCCEEEEEecCCeeeec
Q 004190 473 DASRQADATILVMGLDQSIEAEALDRAGLLLP--GRQQELVSKVSMASKGPTILVLMSGGPIDVA 535 (770)
Q Consensus 473 ~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp--~~q~~li~~v~~~~~~pvIvVl~~g~P~~l~ 535 (770)
+..++||+||++.|... .+|.+|.+|--- .--.++++++.+.+++ .+ +++.+||+++.
T Consensus 74 ~a~~~aDvVIiaag~p~---kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~-a~-vlvvsNPvd~~ 133 (315)
T 3tl2_A 74 ADTADSDVVVITAGIAR---KPGMSRDDLVATNSKIMKSITRDIAKHSPN-AI-IVVLTNPVDAM 133 (315)
T ss_dssp GGGTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCTT-CE-EEECCSSHHHH
T ss_pred HHhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCC-eE-EEECCChHHHH
Confidence 46789999999988643 455566443100 0123455566665554 33 34456898773
No 62
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=24.10 E-value=1.2e+02 Score=29.13 Aligned_cols=52 Identities=21% Similarity=0.173 Sum_probs=34.2
Q ss_pred hHHHHHHHhhccCEEEEEeCCCccccccccccCCCCCChhHHHHHHHHHh-----hCCCCEEEEEecC
Q 004190 467 LFGAAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSM-----ASKGPTILVLMSG 529 (770)
Q Consensus 467 ~~~~a~~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp~~q~~li~~v~~-----~~~~pvIvVl~~g 529 (770)
.+.+..+..+.||.+|++.-+. +..+|+.-..+|+.+.. -.+||+.++..+|
T Consensus 63 ~~~~~~~~i~~AD~iVi~tP~Y-----------~~s~p~~LK~~iD~~~~~~~~~l~gK~v~~v~tsg 119 (199)
T 4hs4_A 63 PVLTMAQQIATADAVVIVTPEY-----------NYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTASP 119 (199)
T ss_dssp HHHHHHHHHHHSSEEEEEECCB-----------TTBCCHHHHHHHHHHTTSSSCTTTTCEEEEEEECS
T ss_pred HHHHHHHHHHhCCEEEEEcCcc-----------CCCcCHHHHHHHHHhcccCCcccCCCEEEEEEeCC
Confidence 4566778889999988876321 34578877888888764 1346655554444
No 63
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=23.21 E-value=18 Score=37.93 Aligned_cols=58 Identities=19% Similarity=0.367 Sum_probs=29.6
Q ss_pred HHhhccCEEEEEeCCCccccccccccCCCCCC--hhHHHHHHHHHhhCCCCEEEEEecCCeeeec
Q 004190 473 DASRQADATILVMGLDQSIEAEALDRAGLLLP--GRQQELVSKVSMASKGPTILVLMSGGPIDVA 535 (770)
Q Consensus 473 ~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp--~~q~~li~~v~~~~~~pvIvVl~~g~P~~l~ 535 (770)
++.++||+||++.|... .+|.+|.+|-.- .--.++.+++.+.+++ .+ +++.+||+++.
T Consensus 65 ~a~~~aDvVii~ag~~~---kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~-a~-vivvtNPvd~~ 124 (314)
T 3nep_X 65 GPTEDSDVCIITAGLPR---SPGMSRDDLLAKNTEIVGGVTEQFVEGSPD-ST-IIVVANPLDVM 124 (314)
T ss_dssp GGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHHHTTCTT-CE-EEECCSSHHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCCHHHHHHhhHHHHHHHHHHHHHhCCC-cE-EEecCCchhHH
Confidence 46789999999988643 345555443110 0123445566655444 33 34456898773
No 64
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=23.13 E-value=90 Score=36.19 Aligned_cols=58 Identities=7% Similarity=-0.043 Sum_probs=42.5
Q ss_pred eeEEEEEEEEeCCCCCcceEEEEEEeCCCC--CCCcccccccc--cceecCCCCeEEEEEEecc
Q 004190 668 LTLGVQVDVKNVGSKDGAHTLLVFSTPPAG--HWAPHKQLVAF--EKVHVPAGAQQRVGINIHV 727 (770)
Q Consensus 668 ~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~--~~~P~k~L~gF--~kv~L~pGes~~V~~~l~~ 727 (770)
..+.|+++++|..+.. ..|+++++...- ...+..++... ..+.|.|+|+++|.+.|..
T Consensus 487 ~df~v~v~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~~l~p~~~~~v~~~i~y 548 (687)
T 2q3z_A 487 SDFDVFAHITNNTAEE--YVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILY 548 (687)
T ss_dssp CCEEEEEEEEECSSSC--EEEEEEEEEEEECTTCCEEEEEEEEEEEEEEECTTEEEEEEEEECH
T ss_pred CCEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCcccceEeeeeeeEEEECCCceEEEEEEECH
Confidence 4699999999998865 678888876432 23455555222 3457999999999999886
No 65
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=21.21 E-value=65 Score=33.85 Aligned_cols=140 Identities=12% Similarity=0.154 Sum_probs=66.0
Q ss_pred ceeeeccCCC--CCCcccCCcceEEEEccCCCCceeecccccccCCCcCCHHHHHHhhheeeeeeccCcccCC-chhhHH
Q 004190 393 GIVLLKNQGP--SLPLSHIRHRTVAVIGPNSDVTVTMIGNYAGIACGYTTPLQGIGRYARTIHQQGCKDVACA-DDQLFG 469 (770)
Q Consensus 393 siVLLKN~~~--~LPL~~~~~~kIaviG~~a~~~~~~~G~~~g~~~~~~t~~~gl~~~~~~~~~~g~~~~~~~-~~~~~~ 469 (770)
.+.|++|... -||+.. .++++++-....+.. .+..+.+.|++.+.-...+-. +.-|+ +...-+
T Consensus 152 ~~~vV~~~edv~~l~~~~--~~kv~~vsQTT~s~~-----------~~~~iv~~L~~r~p~i~~~~~-ntIC~AT~~RQ~ 217 (328)
T 3szu_A 152 GMYLVESPDDVWKLTVKN--EEKLSFMTQTTLSVD-----------DTSDVIDALRKRFPKIVGPRK-DDICYATTNRQE 217 (328)
T ss_dssp CEEEECSHHHHHHCCCSC--TTSEEEEECTTSCHH-----------HHHHHHHHHHHHCTTCBCCSS-CSCCHHHHHHHH
T ss_pred cEEEECCHHHHHhCCcCC--CCeEEEEEecCCcHH-----------HHHHHHHHHHHhCcccccCCC-CCcCHHHHHHHH
Confidence 4667776433 245432 358888763222110 112244566655421111101 11222 233445
Q ss_pred HHHHHhhccCEEEEEeCCCccccccccccCCCCCChhHHHHHHHHHhhCCCCEEEEEecCCeeeeccccCCCCcceE-Ee
Q 004190 470 AAIDASRQADATILVMGLDQSIEAEALDRAGLLLPGRQQELVSKVSMASKGPTILVLMSGGPIDVAFAKNDPRIAAI-IW 548 (770)
Q Consensus 470 ~a~~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp~~q~~li~~v~~~~~~pvIvVl~~g~P~~l~~~~~~~~v~Ai-L~ 548 (770)
++.+.++++|++||+-|.++ .+-.+|. ++++..+.|+.. +-+..=++..|+. .+..| |.
T Consensus 218 av~~lA~~vD~miVVGg~nS---------------SNT~rL~-eia~~~g~~ty~-Ie~~~el~~~wl~---g~~~VGIT 277 (328)
T 3szu_A 218 AVRALAEQAEVVLVVGSKNS---------------SNSNRLA-ELAQRMGKRAFL-IDDAKDIQEEWVK---EVKCVGVT 277 (328)
T ss_dssp HHHHHHHHCSEEEEECCTTC---------------HHHHHHH-HHHHHTTCEEEE-ESSGGGCCHHHHT---TCSEEEEE
T ss_pred HHHHHHHhCCEEEEeCCCCC---------------chHHHHH-HHHHHhCCCEEE-eCChHHCCHHHhC---CCCEEEEe
Confidence 56778899999887654332 2334444 566556666543 3333334445664 44444 44
Q ss_pred ccCCCch-hHHHHHHHHcC
Q 004190 549 AGYPGQA-GGTAIADILFG 566 (770)
Q Consensus 549 a~~~G~e-~g~AladVL~G 566 (770)
++-..++ --+.+.+.|..
T Consensus 278 AGASTP~~lieeVi~~l~~ 296 (328)
T 3szu_A 278 AGASAPDILVQNVVARLQQ 296 (328)
T ss_dssp ECTTCCHHHHHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHHHHH
Confidence 4433332 23444555543
No 66
>3o0l_A Uncharacterized protein; PFAM DUF1425 family member, structural genomics, joint cente structural genomics, JCSG, protein structure initiative; HET: MSE; 1.81A {Shewanella loihica}
Probab=20.79 E-value=3.3e+02 Score=23.70 Aligned_cols=59 Identities=12% Similarity=-0.040 Sum_probs=41.0
Q ss_pred ceeEEEEEEEEeCCCCCcceEEEEEEeCCCCCC-CcccccccccceecCCCCeEEEEEEecc
Q 004190 667 RLTLGVQVDVKNVGSKDGAHTLLVFSTPPAGHW-APHKQLVAFEKVHVPAGAQQRVGINIHV 727 (770)
Q Consensus 667 ~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~-~P~k~L~gF~kv~L~pGes~~V~~~l~~ 727 (770)
++..+++++|+|+.+.+=.=--.+|==+..+.. .|. ...++++.|.++|+.+|+..-+-
T Consensus 37 ~g~l~~~~~l~N~~~~~~~l~Yrf~WyD~~Gl~v~~~--~~~W~~l~l~~~~~~~l~~vapn 96 (112)
T 3o0l_A 37 AGFLRARGTIISKSPKDQRLQYKFTWYDINGATVEDE--GVSWKSLKLHGKQQMQVTALSPN 96 (112)
T ss_dssp GGCEEEEEEEEECSSSCEEEEEEEEEECTTSCBCCCT--TCCCEEEEECTTCEEEEEEECSS
T ss_pred CCeEEEEEEEEeCCCCCEEEEEEEEEECCCCCCcCCC--CCCcEEEEECCCCeEEEEEECCC
Confidence 467899999999987654433444444555532 232 24778899999999998876654
No 67
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=20.15 E-value=30 Score=36.40 Aligned_cols=58 Identities=17% Similarity=0.255 Sum_probs=30.1
Q ss_pred HHhhccCEEEEEeCCCccccccccccCCCCCC--hhHHHHHHHHHhhCCCCEEEEEecCCeeeec
Q 004190 473 DASRQADATILVMGLDQSIEAEALDRAGLLLP--GRQQELVSKVSMASKGPTILVLMSGGPIDVA 535 (770)
Q Consensus 473 ~~a~~aD~vIv~vG~~~~~~~Eg~Dr~~l~Lp--~~q~~li~~v~~~~~~pvIvVl~~g~P~~l~ 535 (770)
++.++||+||++.|... .+|.+|.++--. .--.++++++.+.+++ .++ ++.+||+++.
T Consensus 71 ~a~~~aDiVIiaag~p~---k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~-a~i-ivvtNPvd~~ 130 (324)
T 3gvi_A 71 AAIEGADVVIVTAGVPR---KPGMSRDDLLGINLKVMEQVGAGIKKYAPE-AFV-ICITNPLDAM 130 (324)
T ss_dssp GGGTTCSEEEECCSCCC---C-----CHHHHHHHHHHHHHHHHHHHHCTT-CEE-EECCSSHHHH
T ss_pred HHHCCCCEEEEccCcCC---CCCCCHHHHHHhhHHHHHHHHHHHHHHCCC-eEE-EecCCCcHHH
Confidence 46789999999988643 345555443100 0113445556555544 333 3446898873
Done!