BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004195
(769 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 142/307 (46%), Gaps = 28/307 (9%)
Query: 466 AYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTY 525
+YR +D L+EAT+ FD + G++YKG L DG VA++ +
Sbjct: 26 SYRVPLVD-LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET 84
Query: 526 HIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG---PGYKLT 582
IE +S RH +LVS +G C D +I LI++Y N L+ + G P ++
Sbjct: 85 EIETLSFCRHPHLVSLIGFC------DERNEMI-LIYKYMENGNLKRHLYGSDLPTMSMS 137
Query: 583 WVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARG- 641
W QR+ I +G+ +LHT + ++K ++LLDENF KI + + G
Sbjct: 138 WEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQ 194
Query: 642 -------KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVK 694
KG+ P + +KSDVY +++ +
Sbjct: 195 THLXXVVKGTLGYIDP----EYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV 250
Query: 695 DLLQVNIGT--DEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752
+L + + + + + IVDP + ++ ESL++ + ++CL+ +DRPS+ D LW L
Sbjct: 251 NLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
Query: 753 QFATQIQ 759
++A ++Q
Sbjct: 311 EYALRLQ 317
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 143/311 (45%), Gaps = 36/311 (11%)
Query: 466 AYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTY 525
+YR +D L+EAT+ FD + G++YKG L DG VA++ +
Sbjct: 26 SYRVPLVD-LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFET 84
Query: 526 HIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG---PGYKLT 582
IE +S RH +LVS +G C D +I LI++Y N L+ + G P ++
Sbjct: 85 EIETLSFCRHPHLVSLIGFC------DERNEMI-LIYKYMENGNLKRHLYGSDLPTMSMS 137
Query: 583 WVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARG- 641
W QR+ I +G+ +LHT + ++K ++LLDENF KI + + +G
Sbjct: 138 WEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGI----SKKGT 190
Query: 642 -----------KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVV 690
KG+ P + +KSDVY +++
Sbjct: 191 ELDQTHLXXVVKGTLGYIDP----EYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP 246
Query: 691 VLVKDLLQVNIGT--DEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDT 748
+ +L + + + + + IVDP + ++ ESL++ + ++CL+ +DRPS+ D
Sbjct: 247 REMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
Query: 749 LWNLQFATQIQ 759
LW L++A ++Q
Sbjct: 307 LWKLEYALRLQ 317
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 151/327 (46%), Gaps = 38/327 (11%)
Query: 464 LPAYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHM- 522
L + F+L EL+ A+D F + + + G++YKG+L DGTLVA++ LK + +
Sbjct: 22 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQ 81
Query: 523 YTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFI-----SGP 577
+ +E+IS H NL+ G C+ P+ + L++ Y N ++ S + S P
Sbjct: 82 FQTEVEMISMAVHRNLLRLRGFCM-----TPTERL--LVYPYMANGSVASCLRERPESQP 134
Query: 578 GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637
L W +R A+ +G+ +LH P + ++K ++LLDE F + + L L
Sbjct: 135 --PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 192
Query: 638 EARGKGSAEVSSPAKKT------SVLARTEQDDKSDVY-------DXXXXXXXXXXXXXX 684
+ + V + T L+ + +K+DV+ +
Sbjct: 193 DYK---DXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 249
Query: 685 TSENVVVL--VKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDR 742
++V++L VK LL+ ++ +++VD + DE +++++++ L C + P +R
Sbjct: 250 NDDDVMLLDWVKGLLK-----EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMER 304
Query: 743 PSVEDTLWNLQFATQIQGLKENNQEAL 769
P + + + L+ + +E +E +
Sbjct: 305 PKMSEVVRMLEGDGLAERWEEWQKEEM 331
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 151/328 (46%), Gaps = 40/328 (12%)
Query: 464 LPAYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHM- 522
L + F+L EL+ A+D F + + + G++YKG+L DG LVA++ LK + +
Sbjct: 14 LGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQ 73
Query: 523 YTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFI-----SGP 577
+ +E+IS H NL+ G C+ P+ + L++ Y N ++ S + S P
Sbjct: 74 FQTEVEMISMAVHRNLLRLRGFCM-----TPTERL--LVYPYMANGSVASCLRERPESQP 126
Query: 578 GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637
L W +R A+ +G+ +LH P + ++K ++LLDE F + + L L
Sbjct: 127 --PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 184
Query: 638 EARG-------KGSAEVSSPAKKTSVLARTEQDDKSDVY-------DXXXXXXXXXXXXX 683
+ + +G +P L+ + +K+DV+ +
Sbjct: 185 DYKDXHVXXAVRGXIGHIAP----EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 240
Query: 684 XTSENVVVL--VKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKD 741
++V++L VK LL+ ++ +++VD + DE +++++++ L C + P +
Sbjct: 241 ANDDDVMLLDWVKGLLK-----EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPME 295
Query: 742 RPSVEDTLWNLQFATQIQGLKENNQEAL 769
RP + + + L+ + +E +E +
Sbjct: 296 RPKMSEVVRMLEGDGLAERWEEWQKEEM 323
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 129/306 (42%), Gaps = 28/306 (9%)
Query: 467 YRTFTLDELKEATDCFD------SSSFMCDASHGQIYKGKLTDGTLVAIRSLK----MSK 516
+ +F+ ELK T+ FD + M + G +YKG + + T VA++ L ++
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 70
Query: 517 KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFIS- 575
+ + I++++K +H NLV LG FS D + ++Y+ Y PN +L +S
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLG----FSSDGDDLCLVYV---YMPNGSLLDRLSC 123
Query: 576 -GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634
L+W R A G+ FLH ++K ++LLDE F KI+ + L
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 635 LLAEARGK---GSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVV- 690
+E + S V + A R E KSD+Y E+
Sbjct: 181 RASEKFAQTVMXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP 240
Query: 691 VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLW 750
L+ D+ + ++ + +D MN+ S++ M + +CL + RP ++
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
Query: 751 NLQFAT 756
LQ T
Sbjct: 300 LLQEMT 305
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 128/306 (41%), Gaps = 28/306 (9%)
Query: 467 YRTFTLDELKEATDCFD------SSSFMCDASHGQIYKGKLTDGTLVAIRSLK----MSK 516
+ +F+ ELK T+ FD + M + G +YKG + + T VA++ L ++
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 64
Query: 517 KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFIS- 575
+ + I++++K +H NLV LG FS D + ++Y+ Y PN +L +S
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLG----FSSDGDDLCLVYV---YMPNGSLLDRLSC 117
Query: 576 -GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634
L+W R A G+ FLH ++K ++LLDE F KI+ + L
Sbjct: 118 LDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 174
Query: 635 LLAEARGKGSAE---VSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVV- 690
+E + V + A R E KSD+Y E+
Sbjct: 175 RASEKFAQXVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP 234
Query: 691 VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLW 750
L+ D+ + ++ + +D MN+ S++ M + +CL + RP ++
Sbjct: 235 QLLLDIKEEIEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 293
Query: 751 NLQFAT 756
LQ T
Sbjct: 294 LLQEMT 299
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 128/306 (41%), Gaps = 28/306 (9%)
Query: 467 YRTFTLDELKEATDCFD------SSSFMCDASHGQIYKGKLTDGTLVAIRSLK----MSK 516
+ +F+ ELK T+ FD + M + G +YKG + + T VA++ L ++
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 70
Query: 517 KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFIS- 575
+ + I++++K +H NLV LG FS D + ++Y+ Y PN +L +S
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLG----FSSDGDDLCLVYV---YMPNGSLLDRLSC 123
Query: 576 -GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634
L+W R A G+ FLH ++K ++LLDE F KI+ + L
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 635 LLAEARGKGSAE---VSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVV- 690
+E + V + A R E KSD+Y E+
Sbjct: 181 RASEKFAQTVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP 240
Query: 691 VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLW 750
L+ D+ + ++ + +D MN+ S++ M + +CL + RP ++
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
Query: 751 NLQFAT 756
LQ T
Sbjct: 300 LLQEMT 305
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 26/218 (11%)
Query: 467 YRTFTLDELKEATDCFD------SSSFMCDASHGQIYKGKLTDGTLVAIRSLK----MSK 516
+ +F+ ELK T+ FD + + G +YKG + + T VA++ L ++
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 61
Query: 517 KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFIS- 575
+ + I++ +K +H NLV LG FS D + ++Y+ Y PN +L +S
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLG----FSSDGDDLCLVYV---YXPNGSLLDRLSC 114
Query: 576 -GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634
L+W R A G+ FLH ++K ++LLDE F KI+ + L
Sbjct: 115 LDGTPPLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLA 171
Query: 635 LLAEARGK---GSAEVSSPAKKTSVLARTEQDDKSDVY 669
+E + S V + A R E KSD+Y
Sbjct: 172 RASEKFAQXVXXSRIVGTTAYXAPEALRGEITPKSDIY 209
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 98/224 (43%), Gaps = 10/224 (4%)
Query: 150 GSIPVQIS-SLRNLQTLILDDNKFTGAVPXXXXXXXXXXXXXXXXXXXXGFLPV-SLTGL 207
G IP +S + L L L N F GAVP G LP+ +L +
Sbjct: 280 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 339
Query: 208 QSLRVVSLSANHLSGEIPD-LRNLK-NLRVFDVQDNYF-GPRFPRL----HKKMVTLVLR 260
+ L+V+ LS N SGE+P+ L NL +L D+ N F GP P L + L L+
Sbjct: 340 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQ 399
Query: 261 NNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQN 320
NN F G P L + ++L L +S N G SL SL + L + N L G + Q
Sbjct: 400 NNGFT-GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQE 458
Query: 321 MSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNE 364
+ L + L N LTG +PS L + S N L+ E
Sbjct: 459 LMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 502
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 150 GSIPVQISSLRNLQTLILDDNKFTGAVPXXXXXXXXXXXXXXXXXXXXGFLPVSLTGLQS 209
G IP ++ ++ L+TLILD N TG +P G +P + L++
Sbjct: 453 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 512
Query: 210 LRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYFGPRFP----RLHKKMVTLVLRNNRF 264
L ++ LS N SG IP +L + ++L D+ N F P + K+ + R+
Sbjct: 513 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRY 572
Query: 265 QF--------------------GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSIT 304
+ G+ ++L + +I+ + G P+ + S+
Sbjct: 573 VYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMM 632
Query: 305 YLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLP 342
+LD+ N L+G + + + P L ++L N ++G +P
Sbjct: 633 FLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 670
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
Query: 206 GLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLH--KKMVTLVLRNNR 263
G L+ +++S N +SG++ D+ NL DV N F P L + L + N+
Sbjct: 173 GCGELKHLAISGNKISGDV-DVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNK 231
Query: 264 FQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMS- 322
G + + +L+ L+IS N+FVGP P L L S+ YL + NK TG + +S
Sbjct: 232 LS-GDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSG 288
Query: 323 -CNPQLAFVDLSSNLLTGYLP 342
C+ L +DLS N G +P
Sbjct: 289 ACD-TLTGLDLSGNHFYGAVP 308
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 73/185 (39%), Gaps = 23/185 (12%)
Query: 162 LQTLILDDNKFTGAVPXXXXXXXXXXXXXXXXXXXXGFLPVSLTGLQSLRVVSLSANHLS 221
LQ L L +N FTG +P G +P SL L LR + L N L
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 452
Query: 222 GEIP-DLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQ 280
GEIP +L +K L TL+L N G P L + L
Sbjct: 453 GEIPQELMYVKTLE---------------------TLILDFNDLT-GEIPSGLSNCTNLN 490
Query: 281 KLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGY 340
+ +S NR G + L ++ L + N +G + + L ++DL++NL G
Sbjct: 491 WISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGT 550
Query: 341 LPSCL 345
+P+ +
Sbjct: 551 IPAAM 555
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 85/249 (34%), Gaps = 49/249 (19%)
Query: 150 GSIPVQISSLRNLQTLILDDNKFTGAVPXXXXXXXXXXXXXXXXXXXXGFLPVSLTGLQS 209
G IP +S+ NL + L +N+ TG +P G +P L +S
Sbjct: 477 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRS 536
Query: 210 LRVVSLSANHLSGEIP------------------------------DLRNLKNLRVFDV- 238
L + L+ N +G IP + NL F
Sbjct: 537 LIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGI 596
Query: 239 ---QDNYFGPRFP-----RLHKKMVTLVLRNNRFQF----------GLNPDELRSYNQLQ 280
Q N R P R++ + NN G P E+ S L
Sbjct: 597 RSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLF 656
Query: 281 KLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGY 340
L++ N G + L + LD+ NKL G + Q MS L +DLS+N L+G
Sbjct: 657 ILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGP 716
Query: 341 LPSCLQVEA 349
+P Q E
Sbjct: 717 IPEMGQFET 725
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 21/136 (15%)
Query: 207 LQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQF 266
L SL V+ LSAN +SG N G ++ L + N+
Sbjct: 147 LNSLEVLDLSANSISGA-----------------NVVGWVLSDGCGELKHLAISGNKISG 189
Query: 267 GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQ 326
+ D R N L+ LD+S N F IP L ++ +LDI GNKL+G + +S +
Sbjct: 190 DV--DVSRCVN-LEFLDVSSNNF-STGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTE 245
Query: 327 LAFVDLSSNLLTGYLP 342
L +++SSN G +P
Sbjct: 246 LKLLNISSNQFVGPIP 261
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 98/224 (43%), Gaps = 10/224 (4%)
Query: 150 GSIPVQIS-SLRNLQTLILDDNKFTGAVPXXXXXXXXXXXXXXXXXXXXGFLPV-SLTGL 207
G IP +S + L L L N F GAVP G LP+ +L +
Sbjct: 283 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 342
Query: 208 QSLRVVSLSANHLSGEIPD-LRNLK-NLRVFDVQDNYF-GPRFPRL----HKKMVTLVLR 260
+ L+V+ LS N SGE+P+ L NL +L D+ N F GP P L + L L+
Sbjct: 343 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQ 402
Query: 261 NNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQN 320
NN F G P L + ++L L +S N G SL SL + L + N L G + Q
Sbjct: 403 NNGFT-GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQE 461
Query: 321 MSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNE 364
+ L + L N LTG +PS L + S N L+ E
Sbjct: 462 LMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 505
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 92/218 (42%), Gaps = 25/218 (11%)
Query: 150 GSIPVQISSLRNLQTLILDDNKFTGAVPXXXXXXXXXXXXXXXXXXXXGFLPVSLTGLQS 209
G IP ++ ++ L+TLILD N TG +P G +P + L++
Sbjct: 456 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 515
Query: 210 LRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYFGPRFP----RLHKKMVTLVLRNNRF 264
L ++ LS N SG IP +L + ++L D+ N F P + K+ + R+
Sbjct: 516 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRY 575
Query: 265 QF--------------------GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSIT 304
+ G+ ++L + +I+ + G P+ + S+
Sbjct: 576 VYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMM 635
Query: 305 YLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLP 342
+LD+ N L+G + + + P L ++L N ++G +P
Sbjct: 636 FLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
Query: 206 GLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLH--KKMVTLVLRNNR 263
G L+ +++S N +SG++ D+ NL DV N F P L + L + N+
Sbjct: 176 GCGELKHLAISGNKISGDV-DVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNK 234
Query: 264 FQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMS- 322
G + + +L+ L+IS N+FVGP P L L S+ YL + NK TG + +S
Sbjct: 235 LS-GDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSG 291
Query: 323 -CNPQLAFVDLSSNLLTGYLP 342
C+ L +DLS N G +P
Sbjct: 292 ACD-TLTGLDLSGNHFYGAVP 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 73/185 (39%), Gaps = 23/185 (12%)
Query: 162 LQTLILDDNKFTGAVPXXXXXXXXXXXXXXXXXXXXGFLPVSLTGLQSLRVVSLSANHLS 221
LQ L L +N FTG +P G +P SL L LR + L N L
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 455
Query: 222 GEIP-DLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQ 280
GEIP +L +K L TL+L N G P L + L
Sbjct: 456 GEIPQELMYVKTLE---------------------TLILDFNDLT-GEIPSGLSNCTNLN 493
Query: 281 KLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGY 340
+ +S NR G + L ++ L + N +G + + L ++DL++NL G
Sbjct: 494 WISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGT 553
Query: 341 LPSCL 345
+P+ +
Sbjct: 554 IPAAM 558
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 85/249 (34%), Gaps = 49/249 (19%)
Query: 150 GSIPVQISSLRNLQTLILDDNKFTGAVPXXXXXXXXXXXXXXXXXXXXGFLPVSLTGLQS 209
G IP +S+ NL + L +N+ TG +P G +P L +S
Sbjct: 480 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRS 539
Query: 210 LRVVSLSANHLSGEIP------------------------------DLRNLKNLRVFDV- 238
L + L+ N +G IP + NL F
Sbjct: 540 LIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGI 599
Query: 239 ---QDNYFGPRFP-----RLHKKMVTLVLRNNRFQF----------GLNPDELRSYNQLQ 280
Q N R P R++ + NN G P E+ S L
Sbjct: 600 RSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLF 659
Query: 281 KLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGY 340
L++ N G + L + LD+ NKL G + Q MS L +DLS+N L+G
Sbjct: 660 ILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGP 719
Query: 341 LPSCLQVEA 349
+P Q E
Sbjct: 720 IPEMGQFET 728
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 21/136 (15%)
Query: 207 LQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQF 266
L SL V+ LSAN +SG N G ++ L + N+
Sbjct: 150 LNSLEVLDLSANSISGA-----------------NVVGWVLSDGCGELKHLAISGNKISG 192
Query: 267 GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQ 326
+ D R N L+ LD+S N F IP L ++ +LDI GNKL+G + +S +
Sbjct: 193 DV--DVSRCVN-LEFLDVSSNNF-STGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTE 248
Query: 327 LAFVDLSSNLLTGYLP 342
L +++SSN G +P
Sbjct: 249 LKLLNISSNQFVGPIP 264
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 112/285 (39%), Gaps = 56/285 (19%)
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
E+K CF G+++ G T VAI++LK SP + +++ KL
Sbjct: 16 EVKLGQGCF-----------GEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKL 63
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQR 586
RH LV ++P IY++ EY +L F+ G K + +
Sbjct: 64 RHEKLVQLYA----VVSEEP----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 115
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARG 641
IA+ +A V+ + ++H +L+ ++L+ EN K+ + L L E AR
Sbjct: 116 IASGMAYVERMNYVH---------RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 166
Query: 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNI 701
+ A + ++ R KSDV+ +V +++L
Sbjct: 167 GAKFPIKWTAPEAALYGRF--TIKSDVWSFGILLTELTTKGRVPYPGMV--NREVL---- 218
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
D+ + P C E + + +L +C EP++RP+ E
Sbjct: 219 --DQVERGYRMP-----CPPECPESLHDLMCQCWRKEPEERPTFE 256
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 112/285 (39%), Gaps = 56/285 (19%)
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
E+K CF G+++ G T VAI++LK SP + +++ KL
Sbjct: 189 EVKLGQGCF-----------GEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKL 236
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQR 586
RH LV ++P IY++ EY +L F+ G K + +
Sbjct: 237 RHEKLVQLYA----VVSEEP----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 288
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARG 641
IA+ +A V+ + ++H +L+ ++L+ EN K+ + L L E AR
Sbjct: 289 IASGMAYVERMNYVH---------RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNI 701
+ A + ++ R KSDV+ +V +++L
Sbjct: 340 GAKFPIKWTAPEAALYGRF--TIKSDVWSFGILLTELTTKGRVPYPGMV--NREVL---- 391
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
D+ + P C E + + +L +C EP++RP+ E
Sbjct: 392 --DQVERGYRMP-----CPPECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 112/285 (39%), Gaps = 56/285 (19%)
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
E+K CF G+++ G T VAI++LK SP + +++ KL
Sbjct: 189 EVKLGQGCF-----------GEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKL 236
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQR 586
RH LV ++P IY++ EY +L F+ G K + +
Sbjct: 237 RHEKLVQLYA----VVSEEP----IYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 288
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARG 641
IA+ +A V+ + ++H +L+ ++L+ EN K+ + L L E AR
Sbjct: 289 IASGMAYVERMNYVH---------RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNI 701
+ A + ++ R KSDV+ +V +++L
Sbjct: 340 GAKFPIKWTAPEAALYGRF--TIKSDVWSFGILLTELTTKGRVPYPGMV--NREVL---- 391
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
D+ + P C E + + +L +C EP++RP+ E
Sbjct: 392 --DQVERGYRMP-----CPPECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 112/285 (39%), Gaps = 56/285 (19%)
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
E+K CF G+++ G T VAI++LK SP + +++ KL
Sbjct: 189 EVKLGQGCF-----------GEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKL 236
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQR 586
RH LV ++P IY++ EY +L F+ G K + +
Sbjct: 237 RHEKLVQLYA----VVSEEP----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 288
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARG 641
IA+ +A V+ + ++H +L+ ++L+ EN K+ + L L E AR
Sbjct: 289 IASGMAYVERMNYVH---------RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNI 701
+ A + ++ R KSDV+ +V +++L
Sbjct: 340 GAKFPIKWTAPEAALYGRF--TIKSDVWSFGILLTELTTKGRVPYPGMV--NREVL---- 391
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
D+ + P C E + + +L +C EP++RP+ E
Sbjct: 392 --DQVERGYRMP-----CPPECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 112/285 (39%), Gaps = 56/285 (19%)
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
E+K CF G+++ G T VAI++LK SP + +++ KL
Sbjct: 23 EVKLGQGCF-----------GEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKL 70
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQR 586
RH LV ++P IY++ EY +L F+ G K + +
Sbjct: 71 RHEKLVQLYA----VVSEEP----IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARG 641
IA+ +A V+ + ++H +L+ ++L+ EN K+ + L L E AR
Sbjct: 123 IASGMAYVERMNYVH---------RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNI 701
+ A + ++ R KSDV+ +V +++L
Sbjct: 174 GAKFPIKWTAPEAALYGRF--TIKSDVWSFGILLTELTTKGRVPYPGMV--NREVL---- 225
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
D+ + P C E + + +L +C +P++RP+ E
Sbjct: 226 --DQVERGYRMP-----CPPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 112/285 (39%), Gaps = 56/285 (19%)
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
E+K CF G+++ G T VAI++LK SP + +++ KL
Sbjct: 23 EVKLGQGCF-----------GEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKL 70
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQR 586
RH LV ++P IY++ EY +L F+ G K + +
Sbjct: 71 RHEKLVQLYA----VVSEEP----IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARG 641
IA+ +A V+ + ++H +L+ ++L+ EN K+ + L L E AR
Sbjct: 123 IASGMAYVERMNYVH---------RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ 173
Query: 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNI 701
+ A + ++ R KSDV+ +V +++L
Sbjct: 174 GAKFPIKWTAPEAALYGRF--TIKSDVWSFGILLTELTTKGRVPYPGMV--NREVL---- 225
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
D+ + P C E + + +L +C +P++RP+ E
Sbjct: 226 --DQVERGYRMP-----CPPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 112/285 (39%), Gaps = 56/285 (19%)
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
E+K CF G+++ G T VAI++LK S P + +++ KL
Sbjct: 272 EVKLGQGCF-----------GEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKL 319
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQR 586
RH LV ++P IY++ EY +L F+ G K + +
Sbjct: 320 RHEKLV----QLYAVVSEEP----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 371
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARG 641
IA+ +A V+ + ++H +L+ ++L+ EN K+ + L L E AR
Sbjct: 372 IASGMAYVERMNYVH---------RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 422
Query: 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNI 701
+ A + ++ R KSDV+ +V +++L
Sbjct: 423 GAKFPIKWTAPEAALYGRF--TIKSDVWSFGILLTELTTKGRVPYPGMV--NREVL---- 474
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
D+ + P C E + + +L +C EP++RP+ E
Sbjct: 475 --DQVERGYRMP-----CPPECPESLHDLMCQCWRKEPEERPTFE 512
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 113/285 (39%), Gaps = 56/285 (19%)
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
E+K CF G+++ G T VAI++LK SP + +++ KL
Sbjct: 20 EVKLGQGCF-----------GEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKL 67
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQ------R 586
RH LV ++P IY++ EY +L F+ G G L Q +
Sbjct: 68 RHEKLVQLYA----VVSEEP----IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQ 119
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARG 641
IA+ +A V+ + ++H +L+ ++L+ EN K+ + L L E AR
Sbjct: 120 IASGMAYVERMNYVH---------RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 170
Query: 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNI 701
+ A + ++ R KSDV+ +V +++L
Sbjct: 171 GAKFPIKWTAPEAALYGRF--TIKSDVWSFGILLTELTTKGRVPYPGMV--NREVL---- 222
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
D+ + P C E + + +L +C EP++RP+ E
Sbjct: 223 --DQVERGYRMP-----CPPECPESLHDLMCQCWRKEPEERPTFE 260
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 113/285 (39%), Gaps = 56/285 (19%)
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
E+K CF G+++ G T VAI++LK SP + +++ KL
Sbjct: 20 EVKLGQGCF-----------GEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKL 67
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQ------R 586
RH LV ++P IY++ EY +L F+ G G L Q +
Sbjct: 68 RHEKLVQLYA----VVSEEP----IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQ 119
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARG 641
IA+ +A V+ + ++H +L+ ++L+ EN K+ + L L E AR
Sbjct: 120 IASGMAYVERMNYVH---------RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQ 170
Query: 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNI 701
+ A + ++ R KSDV+ +V +++L
Sbjct: 171 GAKFPIKWTAPEAALYGRF--TIKSDVWSFGILLTELTTKGRVPYPGMV--NREVL---- 222
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
D+ + P C E + + +L +C EP++RP+ E
Sbjct: 223 --DQVERGYRMP-----CPPECPESLHDLMCQCWRKEPEERPTFE 260
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 111/285 (38%), Gaps = 56/285 (19%)
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
E+K CF G+++ G T VAI++LK SP + +++ KL
Sbjct: 23 EVKLGQGCF-----------GEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKL 70
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQR 586
RH LV ++P IY++ EY L F+ G K + +
Sbjct: 71 RHEKLVQLYA----VVSEEP----IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARG 641
IA+ +A V+ + ++H +L+ ++L+ EN K+ + L L E AR
Sbjct: 123 IASGMAYVERMNYVH---------RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNI 701
+ A + ++ R KSDV+ +V +++L
Sbjct: 174 GAKFPIKWTAPEAALYGRF--TIKSDVWSFGILLTELTTKGRVPYPGMV--NREVL---- 225
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
D+ + P C E + + +L +C +P++RP+ E
Sbjct: 226 --DQVERGYRMP-----CPPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 112/285 (39%), Gaps = 56/285 (19%)
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
E+K CF G+++ G T VAI++LK SP + +++ KL
Sbjct: 23 EVKLGQGCF-----------GEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKL 70
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQR 586
RH LV ++P IY++ EY +L F+ G K + +
Sbjct: 71 RHEKLVQLYA----VVSEEP----IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARG 641
IA+ +A V+ + ++H +L+ ++L+ EN K+ + L L E AR
Sbjct: 123 IASGMAYVERMNYVH---------RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNI 701
+ A + ++ R KSDV+ +V +++L
Sbjct: 174 GAKFPIKWTAPEAALYGRF--TIKSDVWSFGILLTELTTKGRVPYPGMV--NREVL---- 225
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
D+ + P C E + + +L +C +P++RP+ E
Sbjct: 226 --DQVERGYRMP-----CPPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 112/285 (39%), Gaps = 56/285 (19%)
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
E+K CF G+++ G T VAI++LK SP + +++ KL
Sbjct: 23 EVKLGQGCF-----------GEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKL 70
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQR 586
RH LV ++P IY++ EY +L F+ G K + +
Sbjct: 71 RHEKLVQLYA----VVSEEP----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARG 641
IA+ +A V+ + ++H +L+ ++L+ EN K+ + L L E AR
Sbjct: 123 IASGMAYVERMNYVH---------RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNI 701
+ A + ++ R KSDV+ +V +++L
Sbjct: 174 GAKFPIKWTAPEAALYGRF--TIKSDVWSFGILLTELTTKGRVPYPGMV--NREVL---- 225
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
D+ + P C E + + +L +C +P++RP+ E
Sbjct: 226 --DQVERGYRMP-----CPPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 112/285 (39%), Gaps = 56/285 (19%)
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
E+K CF G+++ G T VAI++LK SP + +++ KL
Sbjct: 12 EVKLGQGCF-----------GEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKL 59
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQR 586
RH LV ++P IY++ EY +L F+ G K + +
Sbjct: 60 RHEKLVQLYA----VVSEEP----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 111
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARG 641
IA+ +A V+ + ++H +L+ ++L+ EN K+ + L L E AR
Sbjct: 112 IASGMAYVERMNYVH---------RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 162
Query: 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNI 701
+ A + ++ R KSDV+ +V +++L
Sbjct: 163 GAKFPIKWTAPEAALYGRF--TIKSDVWSFGILLTELTTKGRVPYPGMV--NREVL---- 214
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
D+ + P C E + + +L +C +P++RP+ E
Sbjct: 215 --DQVERGYRMP-----CPPECPESLHDLMCQCWRKDPEERPTFE 252
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 110/285 (38%), Gaps = 56/285 (19%)
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
E+K CF G+++ G T VAI++LK SP + +++ KL
Sbjct: 14 EVKLGQGCF-----------GEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKL 61
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQR 586
RH LV S IY++ EY +L F+ G K + +
Sbjct: 62 RHEKLVQLYAVV--------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 113
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARG 641
IA+ +A V+ + ++H +L+ ++L+ EN K+ + L L E AR
Sbjct: 114 IASGMAYVERMNYVH---------RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 164
Query: 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNI 701
+ A + ++ R KSDV+ +V +++L
Sbjct: 165 GAKFPIKWTAPEAALYGRF--TIKSDVWSFGILLTELTTKGRVPYPGMV--NREVL---- 216
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
D+ + P C E + + +L +C +P++RP+ E
Sbjct: 217 --DQVERGYRMP-----CPPECPESLHDLMCQCWRKDPEERPTFE 254
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 111/285 (38%), Gaps = 56/285 (19%)
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
E+K CF G+++ G T VAI++LK SP + +++ KL
Sbjct: 23 EVKLGQGCF-----------GEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKL 70
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQR 586
RH LV ++P IY++ EY L F+ G K + +
Sbjct: 71 RHEKLVQLYA----VVSEEP----IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARG 641
IA+ +A V+ + ++H +L+ ++L+ EN K+ + L L E AR
Sbjct: 123 IASGMAYVERMNYVH---------RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNI 701
+ A + ++ R KSDV+ +V +++L
Sbjct: 174 GAKFPIKWTAPEAALYGRF--TIKSDVWSFGILLTELTTKGRVPYPGMV--NREVL---- 225
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
D+ + P C E + + +L +C +P++RP+ E
Sbjct: 226 --DQVERGYRMP-----CPPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 112/285 (39%), Gaps = 56/285 (19%)
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
E+K CF G+++ G T VAI++LK SP + +++ KL
Sbjct: 190 EVKLGQGCF-----------GEVWMGTWNGTTRVAIKTLK-PGNMSPEAFLQEAQVMKKL 237
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQR 586
RH LV ++P IY++ EY +L F+ G K + +
Sbjct: 238 RHEKLVQLYA----VVSEEP----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 289
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARG 641
IA+ +A V+ + ++H +L+ ++L+ EN K+ + L L E AR
Sbjct: 290 IASGMAYVERMNYVH---------RDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQ 340
Query: 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNI 701
+ A + ++ R KSDV+ +V +++L
Sbjct: 341 GAKFPIKWTAPEAALYGRF--TIKSDVWSFGILLTELTTKGRVPYPGMV--NREVL---- 392
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
D+ + P C E + + +L +C +P++RP+ E
Sbjct: 393 --DQVERGYRMP-----CPPECPESLHDLMCQCWRKDPEERPTFE 430
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 112/285 (39%), Gaps = 56/285 (19%)
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
E+K CF G+++ G T VAI++LK SP + +++ K+
Sbjct: 23 EVKLGQGCF-----------GEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKI 70
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQR 586
RH LV ++P IY++ EY +L F+ G K + +
Sbjct: 71 RHEKLVQLYA----VVSEEP----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARG 641
IA+ +A V+ + ++H +L+ ++L+ EN K+ + L L E AR
Sbjct: 123 IASGMAYVERMNYVH---------RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNI 701
+ A + ++ R KSDV+ +V +++L
Sbjct: 174 GAKFPIKWTAPEAALYGRF--TIKSDVWSFGILLTELTTKGRVPYPGMV--NREVL---- 225
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
D+ + P C E + + +L +C +P++RP+ E
Sbjct: 226 --DQVERGYRMP-----CPPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 111/285 (38%), Gaps = 56/285 (19%)
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
E+K CF G+++ G T VAI++LK SP + +++ KL
Sbjct: 23 EVKLGQGCF-----------GEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKL 70
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQR 586
RH LV ++P IY++ EY +L F+ G K + +
Sbjct: 71 RHEKLVQLYA----VVSEEP----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARG 641
IA+ +A V+ + ++H +L ++L+ EN K+ + L L E AR
Sbjct: 123 IASGMAYVERMNYVH---------RDLAAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNI 701
+ A + ++ R KSDV+ +V +++L
Sbjct: 174 GAKFPIKWTAPEAALYGRF--TIKSDVWSFGILLTELTTKGRVPYPGMV--NREVL---- 225
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
D+ + P C E + + +L +C +P++RP+ E
Sbjct: 226 --DQVERGYRMP-----CPPECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 111/285 (38%), Gaps = 56/285 (19%)
Query: 474 ELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
E+K CF G+++ G T VAI++LK SP + +++ KL
Sbjct: 13 EVKLGQGCF-----------GEVWMGTWNGTTRVAIKTLK-PGTMSPEAFLQEAQVMKKL 60
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQR 586
RH LV ++P I ++ EY +L F+ G K + +
Sbjct: 61 RHEKLVQLYA----VVSEEP----IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 112
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARG 641
IA+ +A V+ + ++H +L+ ++L+ EN K+ + L L E AR
Sbjct: 113 IASGMAYVERMNYVH---------RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ 163
Query: 642 KGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNI 701
+ A + ++ R KSDV+ +V +++L
Sbjct: 164 GAKFPIKWTAPEAALYGRF--TIKSDVWSFGILLTELTTKGRVPYPGMV--NREVL---- 215
Query: 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
D+ + P C E + + +L +C EP++RP+ E
Sbjct: 216 --DQVERGYRMP-----CPPECPESLHDLMCQCWRKEPEERPTFE 253
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 113/269 (42%), Gaps = 46/269 (17%)
Query: 491 ASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHM--YTYHIELISKLRHSNLVSALGHCLDF 548
S G +++ + G+ VA++ L + + + + ++ +LRH N+V +G
Sbjct: 48 GSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ- 105
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFI--SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVP 606
P++SI+ EY +L + SG +L +R++ A + KG+ +LH P
Sbjct: 106 ---PPNLSIVT---EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NP 158
Query: 607 GVFSNNLKITDVLLDENFHVKINSYNLP------LLAEARGKGSAEVSSPAKKTSVLART 660
+ NLK ++L+D+ + VK+ + L L+ G+ E +P VL
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAP----EVLRDE 214
Query: 661 EQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECS 720
++KSDVY S V++ LQ G + + AV +C
Sbjct: 215 PSNEKSDVY----------------SFGVILWELATLQQPWGNLNPAQVVA--AVGFKCK 256
Query: 721 DESLKR-----MMELCLRCLSNEPKDRPS 744
+ R + + C +NEP RPS
Sbjct: 257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPS 285
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G +VA++ L+ S + + IE++ L+H N+V G C + + LI E
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN-----LKLIME 96
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y P +LR ++ ++ ++ + I KG+++L T +L ++L++
Sbjct: 97 YLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 153
Query: 624 FHVKINSYNL 633
VKI + L
Sbjct: 154 NRVKIGDFGL 163
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G +VA++ L+ S + + IE++ L+H N+V G C + + LI E
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN-----LKLIME 94
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y P +LR ++ ++ ++ + I KG+++L T NL ++L++
Sbjct: 95 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRNLATRNILVENE 151
Query: 624 FHVKINSYNL 633
VKI + L
Sbjct: 152 NRVKIGDFGL 161
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G+++ G T VA++SLK SP + L+ +L+H LV +P
Sbjct: 23 GEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLV----RLYAVVTQEP 77
Query: 554 SISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
IY+I EY N +L F+ P G KLT + + A I +G+ F+ N
Sbjct: 78 ----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRN 130
Query: 613 LKITDVLLDENFHVKINSYNLPLLAE 638
L+ ++L+ + KI + L L E
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIE 156
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G +VA++ L+ S + + IE++ L+H N+V G C + + LI E
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN-----LKLIME 96
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y P +LR ++ ++ ++ + I KG+++L T +L ++L++
Sbjct: 97 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 153
Query: 624 FHVKINSYNL 633
VKI + L
Sbjct: 154 NRVKIGDFGL 163
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G +VA++ L+ S + + IE++ L+H N+V G C + + LI E
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN-----LKLIME 98
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y P +LR ++ ++ ++ + I KG+++L T +L ++L++
Sbjct: 99 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 155
Query: 624 FHVKINSYNL 633
VKI + L
Sbjct: 156 NRVKIGDFGL 165
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G +VA++ L+ S + + IE++ L+H N+V G C + + LI E
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN-----LKLIME 99
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y P +LR ++ ++ ++ + I KG+++L T +L ++L++
Sbjct: 100 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 156
Query: 624 FHVKINSYNL 633
VKI + L
Sbjct: 157 NRVKIGDFGL 166
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G +VA++ L+ S + + IE++ L+H N+V G C + + LI E
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN-----LKLIME 92
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y P +LR ++ ++ ++ + I KG+++L T +L ++L++
Sbjct: 93 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 149
Query: 624 FHVKINSYNL 633
VKI + L
Sbjct: 150 NRVKIGDFGL 159
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G +VA++ L+ S + + IE++ L+H N+V G C + + LI E
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN-----LKLIME 91
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y P +LR ++ ++ ++ + I KG+++L T +L ++L++
Sbjct: 92 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 148
Query: 624 FHVKINSYNL 633
VKI + L
Sbjct: 149 NRVKIGDFGL 158
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G +VA++ L+ S + + IE++ L+H N+V G C + + LI E
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN-----LKLIME 93
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y P +LR ++ ++ ++ + I KG+++L T +L ++L++
Sbjct: 94 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 150
Query: 624 FHVKINSYNL 633
VKI + L
Sbjct: 151 NRVKIGDFGL 160
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G +VA++ L+ S + + IE++ L+H N+V G C + + LI E
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN-----LKLIME 124
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y P +LR ++ ++ ++ + I KG+++L T +L ++L++
Sbjct: 125 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 181
Query: 624 FHVKINSYNL 633
VKI + L
Sbjct: 182 NRVKIGDFGL 191
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G +VA++ L+ S + + IE++ L+H N+V G C + + LI E
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN-----LKLIME 100
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y P +LR ++ ++ ++ + I KG+++L T +L ++L++
Sbjct: 101 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 157
Query: 624 FHVKINSYNL 633
VKI + L
Sbjct: 158 NRVKIGDFGL 167
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G +VA++ L+ S + + IE++ L+H N+V G C + + LI E
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN-----LKLIME 97
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y P +LR ++ ++ ++ + I KG+++L T +L ++L++
Sbjct: 98 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 154
Query: 624 FHVKINSYNL 633
VKI + L
Sbjct: 155 NRVKIGDFGL 164
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 112/269 (41%), Gaps = 46/269 (17%)
Query: 491 ASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHM--YTYHIELISKLRHSNLVSALGHCLDF 548
S G +++ + G+ VA++ L + + + + ++ +LRH N+V +G
Sbjct: 48 GSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ- 105
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFI--SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVP 606
P++SI+ EY +L + SG +L +R++ A + KG+ +LH P
Sbjct: 106 ---PPNLSIVT---EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NP 158
Query: 607 GVFSNNLKITDVLLDENFHVKINSYNLP------LLAEARGKGSAEVSSPAKKTSVLART 660
+ +LK ++L+D+ + VK+ + L L G+ E +P VL
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAP----EVLRDE 214
Query: 661 EQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECS 720
++KSDVY S V++ LQ G + + AV +C
Sbjct: 215 PSNEKSDVY----------------SFGVILWELATLQQPWGNLNPAQVVA--AVGFKCK 256
Query: 721 DESLKR-----MMELCLRCLSNEPKDRPS 744
+ R + + C +NEP RPS
Sbjct: 257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPS 285
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 473 DELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISK 532
DE + + + G+++ G T VA++SLK SP + L+ +
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQ 70
Query: 533 LRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAI 591
L+H LV +P IY+I EY N +L F+ P G KLT + + A
Sbjct: 71 LQHQRLVRLYA----VVTQEP----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 122
Query: 592 AIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638
I +G+ F+ +L+ ++L+ + KI + L L E
Sbjct: 123 QIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 166
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 473 DELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISK 532
DE + + + G+++ G T VA++SLK SP + L+ +
Sbjct: 14 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQ 72
Query: 533 LRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAI 591
L+H LV +P IY+I EY N +L F+ P G KLT + + A
Sbjct: 73 LQHQRLV----RLYAVVTQEP----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 124
Query: 592 AIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638
I +G+ F+ +L+ ++L+ + KI + L L E
Sbjct: 125 QIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 168
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G +VA++ L+ S + + IE++ L+H N+V G C + + LI E
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN-----LKLIME 93
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y P +LR ++ ++ ++ + I KG+++L T +L ++L++
Sbjct: 94 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 150
Query: 624 FHVKINSYNL 633
VKI + L
Sbjct: 151 NRVKIGDFGL 160
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 13/149 (8%)
Query: 491 ASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
G+++ G T VA++SLK SP + L+ +L+H LV
Sbjct: 33 GQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYA----VVT 87
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVF 609
+P IY+I EY N +L F+ P G KLT + + A I +G+ F+
Sbjct: 88 QEP----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 140
Query: 610 SNNLKITDVLLDENFHVKINSYNLPLLAE 638
+L+ ++L+ + KI + L L E
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIE 169
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G+++ G T VA++SLK SP + L+ +L+H LV +P
Sbjct: 32 GEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYA----VVTQEP 86
Query: 554 SISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
IY+I EY N +L F+ P G KLT + + A I +G+ F+ +
Sbjct: 87 ----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRD 139
Query: 613 LKITDVLLDENFHVKINSYNLPLLAE 638
L+ ++L+ + KI + L L E
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLIE 165
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 13/149 (8%)
Query: 491 ASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
G+++ G T VA++SLK SP + L+ +L+H LV
Sbjct: 24 GQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYA----VVT 78
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVF 609
+P IY+I EY N +L F+ P G KLT + + A I +G+ F+
Sbjct: 79 QEP----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 610 SNNLKITDVLLDENFHVKINSYNLPLLAE 638
+L+ ++L+ + KI + L L E
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIE 160
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G+++ G T VA++SLK SP + L+ +L+H LV +P
Sbjct: 29 GEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYA----VVTQEP 83
Query: 554 SISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
IY+I EY N +L F+ P G KLT + + A I +G+ F+ +
Sbjct: 84 ----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRD 136
Query: 613 LKITDVLLDENFHVKINSYNLPLLAE 638
L+ ++L+ + KI + L L E
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIE 162
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G+++ G T VA++SLK SP + L+ +L+H LV +P
Sbjct: 33 GEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYA----VVTQEP 87
Query: 554 SISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
IY+I EY N +L F+ P G KLT + + A I +G+ F+ +
Sbjct: 88 ----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRD 140
Query: 613 LKITDVLLDENFHVKINSYNLPLLAE 638
L+ ++L+ + KI + L L E
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIE 166
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G+++ G T VA++SLK SP + L+ +L+H LV +P
Sbjct: 28 GEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYA----VVTQEP 82
Query: 554 SISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
IY+I EY N +L F+ P G KLT + + A I +G+ F+ +
Sbjct: 83 ----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRD 135
Query: 613 LKITDVLLDENFHVKINSYNLPLLAE 638
L+ ++L+ + KI + L L E
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIE 161
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G +VA++ L+ S + + IE++ L+H N+V G C + + LI E
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN-----LKLIME 111
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y P +LR ++ ++ ++ + I KG+++L T +L ++L++
Sbjct: 112 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 168
Query: 624 FHVKINSYNL 633
VKI + L
Sbjct: 169 NRVKIGDFGL 178
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G +VA++ L+ S + + IE++ L+H N+V G C + + LI E
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN-----LKLIME 111
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y P +LR ++ ++ ++ + I KG+++L T +L ++L++
Sbjct: 112 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 168
Query: 624 FHVKINSYNL 633
VKI + L
Sbjct: 169 NRVKIGDFGL 178
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G+++ G T VA++SLK SP + L+ +L+H LV +P
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYA----VVTQEP 81
Query: 554 SISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
IY+I EY N +L F+ P G KLT + + A I +G+ F+ +
Sbjct: 82 ----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRD 134
Query: 613 LKITDVLLDENFHVKINSYNLPLLAE 638
L+ ++L+ + KI + L L E
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIE 160
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G+++ G T VA++SLK SP + L+ +L+H LV +P
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLV----RLYAVVTQEP 81
Query: 554 SISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
IY+I EY N +L F+ P G KLT + + A I +G+ F+ +
Sbjct: 82 ----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRD 134
Query: 613 LKITDVLLDENFHVKINSYNLPLLAE 638
L+ ++L+ + KI + L L E
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIE 160
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G +VA++ L+ S + + IE++ L+H N+V G C + + LI E
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN-----LKLIME 93
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y P +LR ++ ++ ++ + I KG+++L T +L ++L++
Sbjct: 94 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 150
Query: 624 FHVKINSYNL 633
VKI + L
Sbjct: 151 NRVKIGDFGL 160
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G+++ G T VA++SLK SP + L+ +L+H LV +P
Sbjct: 22 GEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYA----VVTQEP 76
Query: 554 SISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
IY+I EY N +L F+ P G KLT + + A I +G+ F+ +
Sbjct: 77 ----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 129
Query: 613 LKITDVLLDENFHVKINSYNLPLLAE 638
L+ ++L+ + KI + L L E
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIE 155
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 473 DELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISK 532
DE + + + G+++ G T VA++SLK SP + L+ +
Sbjct: 16 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQ 74
Query: 533 LRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAI 591
L+H LV +P IY+I EY N +L F+ P G KLT + + A
Sbjct: 75 LQHQRLVRLYA----VVTQEP----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 126
Query: 592 AIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638
I +G+ F+ +L+ ++L+ + KI + L L E
Sbjct: 127 QIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 170
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G+++ G T VA++SLK SP + L+ +L+H LV +P
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYA----VVTQEP 81
Query: 554 SISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
IY+I EY N +L F+ P G KLT + + A I +G+ F+ +
Sbjct: 82 ----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRD 134
Query: 613 LKITDVLLDENFHVKINSYNLPLLAE 638
L+ ++L+ + KI + L L E
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIE 160
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G +VA++ L+ S + + IE++ L+H N+V G C + + LI E
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN-----LKLIME 96
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
+ P +LR ++ ++ ++ + I KG+++L T +L ++L++
Sbjct: 97 FLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENE 153
Query: 624 FHVKINSYNL 633
VKI + L
Sbjct: 154 NRVKIGDFGL 163
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 15/133 (11%)
Query: 504 GTLVAIRSLKMSKKSSPHM---YTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560
G +VA+++LK P + I+++ L H +++ G C +D + L
Sbjct: 43 GEMVAVKALKAD--CGPQHRSGWKQEIDILRTLYHEHIIKYKGCC-----EDQGEKSLQL 95
Query: 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL 620
+ EY P +LR ++ P + + Q + A I +G+ +LH+ NL +VLL
Sbjct: 96 VMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLHS---QHYIHRNLAARNVLL 150
Query: 621 DENFHVKINSYNL 633
D + VKI + L
Sbjct: 151 DNDRLVKIGDFGL 163
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 118/290 (40%), Gaps = 52/290 (17%)
Query: 482 FDSSSFMCDASHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVS 540
F + GQ++K K DG I+ +K + + + ++ ++KL H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVH 68
Query: 541 ALGHCLDFSLDDPSIS----------IIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAA 589
G C D DP S +++ E+ TL +I G KL V +
Sbjct: 69 YNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127
Query: 590 AIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL-----AEARGKGS 644
I KGV ++H+ + + +LK +++ L + VKI + L R KG+
Sbjct: 128 FEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGT 184
Query: 645 AEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNIGTD 704
SP + ++ + + D+Y + +++ +LL V
Sbjct: 185 LRYMSPEQ----ISSQDYGKEVDLY------------------ALGLILAELLHVCDTAF 222
Query: 705 EARKSIVD--PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNL 752
E K D ++++ D+ K +++ + LS +P+DRP+ + L L
Sbjct: 223 ETSKFFTDLRDGIISDIFDKKEKTLLQ---KLLSKKPEDRPNTSEILRTL 269
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
Query: 504 GTLVAIRSLKMSKKSSPHM---YTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560
G +VA+++LK P + I+++ L H +++ G C +D + L
Sbjct: 43 GEMVAVKALKAD--CGPQHRSGWKQEIDILRTLYHEHIIKYKGCC-----EDQGEKSLQL 95
Query: 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL 620
+ EY P +LR ++ P + + Q + A I +G+ +LH NL +VLL
Sbjct: 96 VMEYVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLHA---QHYIHRNLAARNVLL 150
Query: 621 DENFHVKINSYNL 633
D + VKI + L
Sbjct: 151 DNDRLVKIGDFGL 163
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 11/132 (8%)
Query: 504 GTLVAIRSLKMSKKSSPHM--YTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLI 561
G VA++SLK + H+ IE++ L H N+V G C + + I LI
Sbjct: 50 GEQVAVKSLK-PESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG-----IKLI 103
Query: 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD 621
E+ P+ +L+ ++ K+ Q++ A+ I KG+ +L + +L +VL++
Sbjct: 104 MEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVE 160
Query: 622 ENFHVKINSYNL 633
VKI + L
Sbjct: 161 SEHQVKIGDFGL 172
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 11/132 (8%)
Query: 504 GTLVAIRSLKMSKKSSPHM--YTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLI 561
G VA++SLK + H+ IE++ L H N+V G C + + I LI
Sbjct: 38 GEQVAVKSLK-PESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG-----IKLI 91
Query: 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD 621
E+ P+ +L+ ++ K+ Q++ A+ I KG+ +L + +L +VL++
Sbjct: 92 MEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVE 148
Query: 622 ENFHVKINSYNL 633
VKI + L
Sbjct: 149 SEHQVKIGDFGL 160
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 24/195 (12%)
Query: 485 SSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYH--IELISKLRHSNLVSAL 542
S+ + S G +YKGK VA++ LK+ + + + ++ K RH N++ +
Sbjct: 41 STRIGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFM 98
Query: 543 GHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHT 602
G+ +L ++ ++ +L + K Q I A +G+ +LH
Sbjct: 99 GYMTKDNLA--------IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA 150
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLA---- 658
+ ++K ++ L E VKI + L + ++R GS +V P +A
Sbjct: 151 ---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATV-KSRWSGSQQVEQPTGSVLWMAPEVI 206
Query: 659 RTEQDD----KSDVY 669
R + ++ +SDVY
Sbjct: 207 RMQDNNPFSFQSDVY 221
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 108/276 (39%), Gaps = 55/276 (19%)
Query: 488 MCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLD 547
+ + G+++ G T VAI++LK SP + +++ KL+H LV
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQLYAVV-- 73
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFIS-GPGYKLT------WVQRIAAAIAIVKGVQFL 600
S IY++ EY +L F+ G G L ++AA +A ++ + ++
Sbjct: 74 ------SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYI 127
Query: 601 HTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE-----ARGKGSAEVSSPAKKTS 655
H +L+ ++L+ KI + L L E AR + A + +
Sbjct: 128 H---------RDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAA 178
Query: 656 VLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLL---QVNIGTDEARKSI-- 710
+ R KSDV+ + +L+ +L+ +V R+ +
Sbjct: 179 LYGRF--TIKSDVW------------------SFGILLTELVTKGRVPYPGMNNREVLEQ 218
Query: 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE 746
V+ C + + EL + C +P++RP+ E
Sbjct: 219 VERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFE 254
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 34/149 (22%)
Query: 503 DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIF 562
D LVA+++LK + ++ + EL++ L+H ++V G C++ DP I ++F
Sbjct: 42 DKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE---GDPLI----MVF 94
Query: 563 EYAPNETLRSFISGPG------------------YKLTWVQRIAAAIAIVKGVQFLHTGI 604
EY + L F+ G L Q+IAA + + F+H
Sbjct: 95 EYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVH--- 151
Query: 605 VPGVFSNNLKITDVLLDENFHVKINSYNL 633
+L + L+ EN VKI + +
Sbjct: 152 ------RDLATRNCLVGENLLVKIGDFGM 174
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 61/146 (41%), Gaps = 6/146 (4%)
Query: 150 GSIPVQISSLRNLQTLILDDNKFTGAVP-XXXXXXXXXXXXXXXXXXXXGFLPVSLTGLQ 208
G++P ISSL NL + D N+ +GA+P G +P + L
Sbjct: 139 GTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL- 197
Query: 209 SLRVVSLSANHLSGEIPDL-RNLKNLRVFDVQDNYFGPRFPR--LHKKMVTLVLRNNRFQ 265
+L V LS N L G+ L + KN + + N + L K + L LRNNR
Sbjct: 198 NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRI- 256
Query: 266 FGLNPDELRSYNQLQKLDISLNRFVG 291
+G P L L L++S N G
Sbjct: 257 YGTLPQGLTQLKFLHSLNVSFNNLCG 282
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 67/170 (39%), Gaps = 31/170 (18%)
Query: 198 GFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFP---RLHKK 253
G +P ++ L L + ++ ++SG IPD L +K L D N P
Sbjct: 91 GPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPN 150
Query: 254 MVTLVLRNNRFQFGLNPDELRSYNQL-QKLDISLNRFVGPFIPSLLSLPSITYLDIHGNK 312
+V + NR G PD S+++L + IS NR G P+ +L
Sbjct: 151 LVGITFDGNRIS-GAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL------------ 197
Query: 313 LTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLS 362
LAFVDLS N+L G + T+ + +KN L+
Sbjct: 198 -------------NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA 234
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 198 GFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDN 241
G LP LT L+ L +++S N+L GEIP NL+ V +N
Sbjct: 258 GTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANN 301
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 472 LDELKEATDCFDSSSFMCDASHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELI 530
L L++ F+ + + ++GQ+YKG+ + G L AI+ + ++ + I ++
Sbjct: 16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEI-KQEINML 74
Query: 531 SKL-RHSNLVSALGHCLDF---SLDDPSISIIYLIFEYAPNETLRSFI---SGPGYKLTW 583
K H N+ + G + +DD ++L+ E+ ++ I G K W
Sbjct: 75 KKYSHHRNIATYYGAFIKKNPPGMDDQ----LWLVMEFCGAGSVTDLIKNTKGNTLKEEW 130
Query: 584 VQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633
+ I I++G+ LH V ++K +VLL EN VK+ + +
Sbjct: 131 IAYICR--EILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV 175
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 117/303 (38%), Gaps = 65/303 (21%)
Query: 482 FDSSSFMCDASHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVS 540
F + GQ++K K DG IR +K + + + ++ ++KL H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIVH 69
Query: 541 ALGHCLDFSLDDPSIS-----------------------IIYLIFEYAPNETLRSFISGP 577
G C D DP S +++ E+ TL +I
Sbjct: 70 YNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 578 -GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636
G KL V + I KGV ++H+ + +LK +++ L + VKI + L
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 637 -----AEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVV 691
R KG+ SP + ++ + + D+Y + +
Sbjct: 186 LKNDGKRTRSKGTLRYMSPEQ----ISSQDYGKEVDLY------------------ALGL 223
Query: 692 LVKDLLQVNIGTDEARKSIVD--PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
++ +LL V E K D ++++ D+ K +++ + LS +P+DRP+ + L
Sbjct: 224 ILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQ---KLLSKKPEDRPNTSEIL 280
Query: 750 WNL 752
L
Sbjct: 281 RTL 283
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 36/151 (23%)
Query: 503 DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIF 562
D LVA+++LK + +S+ + EL++ L+H ++V G C + P + ++F
Sbjct: 47 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE---GRP----LLMVF 99
Query: 563 EYAPNETLRSFIS--GP------------------GYKLTWVQRIAAAIAIVKGVQFLHT 602
EY + L F+ GP G L ++AA + + G+ F+H
Sbjct: 100 EYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVH- 158
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNL 633
+L + L+ + VKI + +
Sbjct: 159 --------RDLATRNCLVGQGLVVKIGDFGM 181
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 36/151 (23%)
Query: 503 DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIF 562
D LVA+++LK + +S+ + EL++ L+H ++V G C + P + ++F
Sbjct: 70 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE---GRP----LLMVF 122
Query: 563 EYAPNETLRSFIS--GP------------------GYKLTWVQRIAAAIAIVKGVQFLHT 602
EY + L F+ GP G L ++AA + + G+ F+H
Sbjct: 123 EYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVH- 181
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNL 633
+L + L+ + VKI + +
Sbjct: 182 --------RDLATRNCLVGQGLVVKIGDFGM 204
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 36/151 (23%)
Query: 503 DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIF 562
D LVA+++LK + +S+ + EL++ L+H ++V G C + P + ++F
Sbjct: 41 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE---GRP----LLMVF 93
Query: 563 EYAPNETLRSFIS--GP------------------GYKLTWVQRIAAAIAIVKGVQFLHT 602
EY + L F+ GP G L ++AA + + G+ F+H
Sbjct: 94 EYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVH- 152
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNL 633
+L + L+ + VKI + +
Sbjct: 153 --------RDLATRNCLVGQGLVVKIGDFGM 175
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 28/176 (15%)
Query: 477 EATDCFDSSSFMCDASHGQIYKGKLTD-GTLVAIRSL------KMSKKSSPHMYTYHIEL 529
++ + +++ + + S+G + K + D G +VAI+ KM KK + I+L
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIA----MREIKL 77
Query: 530 ISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPN---ETLRSFISGPGYKLTWVQR 586
+ +LRH NLV+ L C YL+FE+ + + L F +G Y++ VQ+
Sbjct: 78 LKQLRHENLVNLLEVC-------KKKKRWYLVFEFVDHTILDDLELFPNGLDYQV--VQK 128
Query: 587 IAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK 642
I+ G+ F H+ + ++K ++L+ ++ VK+ + A G+
Sbjct: 129 Y--LFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G LVA++ L+ S + I+++ L +V G + + P + L+ E
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRG--VSYGPGRPELR---LVME 90
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y P+ LR F+ +L + + + I KG+++L + +L ++L++
Sbjct: 91 YLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESE 147
Query: 624 FHVKINSYNL 633
HVKI + L
Sbjct: 148 AHVKIADFGL 157
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 15/142 (10%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELIS--KLRHSNLVSALGHCLDFSLD 551
GQ+Y G+ VAIR + + + + + + E+++ + RH N+V +G C +
Sbjct: 47 GQVYHGRWHGE--VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC----MS 100
Query: 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSN 611
P ++II + TL S + L + A IVKG+ +LH G+
Sbjct: 101 PPHLAIITSL---CKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHK 154
Query: 612 NLKITDVLLDENFHVKINSYNL 633
+LK +V D N V I + L
Sbjct: 155 DLKSKNVFYD-NGKVVITDFGL 175
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G LVA++ L+ S + I+++ L +V G + + P + L+ E
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRG--VSYG---PGRQSLRLVME 94
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y P+ LR F+ +L + + + I KG+++L + +L ++L++
Sbjct: 95 YLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESE 151
Query: 624 FHVKINSYNL 633
HVKI + L
Sbjct: 152 AHVKIADFGL 161
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G LVA++ L+ S + I+++ L +V G + + P + L+ E
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRG--VSYG---PGRQSLRLVME 106
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y P+ LR F+ +L + + + I KG+++L + +L ++L++
Sbjct: 107 YLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESE 163
Query: 624 FHVKINSYNL 633
HVKI + L
Sbjct: 164 AHVKIADFGL 173
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G LVA++ L+ S + I+++ L +V G + + P + L+ E
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRG--VSYG---PGRQSLRLVME 93
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y P+ LR F+ +L + + + I KG+++L + +L ++L++
Sbjct: 94 YLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESE 150
Query: 624 FHVKINSYNL 633
HVKI + L
Sbjct: 151 AHVKIADFGL 160
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 30/164 (18%)
Query: 490 DASHGQIYKGKLTDGTL---VAIRSLKMSKKSSPHM-YTYHIELISKL-RHSNLVSALGH 544
+ + GQ+ K ++ L AI+ +K H + +E++ KL H N+++ LG
Sbjct: 32 EGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGA 91
Query: 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFI-------SGPGYK--------LTWVQRIAA 589
C +YL EYAP+ L F+ + P + L+ Q +
Sbjct: 92 C-------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 144
Query: 590 AIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633
A + +G+ +L NL ++L+ EN+ KI + L
Sbjct: 145 AADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGL 185
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 66/156 (42%), Gaps = 12/156 (7%)
Query: 491 ASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
S G +YKGK V + ++ + + ++ K RH N++ +G+
Sbjct: 24 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS----- 78
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
P ++I+ ++ +L + K ++ I A +G+ +LH +
Sbjct: 79 TKPQLAIVT---QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIH 132
Query: 611 NNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAE 646
+LK ++ L E+ VKI + L + ++R GS +
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQ 167
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 491 ASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTY--HIELISKLRHSNLVSALGHCLDF 548
S G +YKGK VA++ L ++ + + + + ++ K RH N++ +G+
Sbjct: 19 GSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS--- 73
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
P ++I+ ++ +L + K ++ I A +G+ +LH +
Sbjct: 74 --TKPQLAIVT---QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSI 125
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAE 646
+LK ++ L E+ VKI + L + ++R GS +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQ 162
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 66/156 (42%), Gaps = 12/156 (7%)
Query: 491 ASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
S G +YKGK V + ++ + + ++ K RH N++ +G+
Sbjct: 46 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS----- 100
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
P ++I+ ++ +L + K ++ I A +G+ +LH +
Sbjct: 101 TKPQLAIVT---QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIH 154
Query: 611 NNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAE 646
+LK ++ L E+ VKI + L + ++R GS +
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQ 189
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 66/156 (42%), Gaps = 12/156 (7%)
Query: 491 ASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
S G +YKGK V + ++ + + ++ K RH N++ +G+
Sbjct: 47 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS----- 101
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
P ++I+ ++ +L + K ++ I A +G+ +LH +
Sbjct: 102 TKPQLAIVT---QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIH 155
Query: 611 NNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAE 646
+LK ++ L E+ VKI + L + ++R GS +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQ 190
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 19/167 (11%)
Query: 494 GQIYKGKL--TDGTLV--AIRSL-KMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G +Y G L DG + A++SL +++ + ++ H N++S LG CL
Sbjct: 42 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR- 100
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
S P + + Y + LR+FI + T I + + KG++FL +
Sbjct: 101 SEGSPLV-----VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKF 152
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS 655
+L + +LDE F VK+ + L AR E S KT
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGL-----ARDMYDKEFDSVHNKTG 194
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 491 ASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTY--HIELISKLRHSNLVSALGHCLDF 548
S G +YKGK VA++ L ++ + + + + ++ K RH N++ +G+
Sbjct: 21 GSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS--- 75
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
P ++I+ ++ +L + K ++ I A +G+ +LH +
Sbjct: 76 --TKPQLAIVT---QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSI 127
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAE 646
+LK ++ L E+ VKI + L + ++R GS +
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQ 164
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 491 ASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTY--HIELISKLRHSNLVSALGHCLDF 548
S G +YKGK VA++ L ++ + + + + ++ K RH N++ +G+
Sbjct: 24 GSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS--- 78
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
P ++I+ ++ +L + K ++ I A +G+ +LH +
Sbjct: 79 --TKPQLAIVT---QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSI 130
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAE 646
+LK ++ L E+ VKI + L + ++R GS +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQ 167
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 19/167 (11%)
Query: 494 GQIYKGKL--TDGTLV--AIRSL-KMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G +Y G L DG + A++SL +++ + ++ H N++S LG CL
Sbjct: 45 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR- 103
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
S P + + Y + LR+FI + T I + + KG++FL +
Sbjct: 104 SEGSPLV-----VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKF 155
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS 655
+L + +LDE F VK+ + L AR E S KT
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGL-----ARDMYDKEFDSVHNKTG 197
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 491 ASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTY--HIELISKLRHSNLVSALGHCLDF 548
S G +YKGK VA++ L ++ + + + + ++ K RH N++ +G+
Sbjct: 19 GSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS--- 73
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
P ++I+ ++ +L + K ++ I A +G+ +LH +
Sbjct: 74 --TAPQLAIVT---QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSI 125
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAE 646
+LK ++ L E+ VKI + L + ++R GS +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQ 162
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 28/169 (16%)
Query: 462 ASLPAYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKK 517
A +P R FT+D+ FD + G +Y + + A++ L ++ K+
Sbjct: 5 AEMPK-RKFTIDD-------FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKE 56
Query: 518 SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGP 577
H IE+ S LRH N++ + D IYL+ E+AP L +
Sbjct: 57 GVEHQLRREIEIQSHLRHPNILRMYNYFHDRKR-------IYLMLEFAPRGELYKELQKH 109
Query: 578 G-----YKLTWVQRIAAAIAIVKGVQFLHTGIVPG----VFSNNLKITD 617
G T+++ +A A+ + +H I P + LKI D
Sbjct: 110 GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIAD 158
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 19/167 (11%)
Query: 494 GQIYKGKL--TDGTLV--AIRSL-KMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G +Y G L DG + A++SL +++ + ++ H N++S LG CL
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR- 102
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
S P + + Y + LR+FI + T I + + KG++FL +
Sbjct: 103 SEGSPLV-----VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKF 154
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS 655
+L + +LDE F VK+ + L AR E S KT
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGL-----ARDMYDKEFDSVHNKTG 196
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 19/167 (11%)
Query: 494 GQIYKGKL--TDGTLV--AIRSL-KMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G +Y G L DG + A++SL +++ + ++ H N++S LG CL
Sbjct: 49 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR- 107
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
S P + + Y + LR+FI + T I + + KG++FL +
Sbjct: 108 SEGSPLV-----VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKF 159
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS 655
+L + +LDE F VK+ + L AR E S KT
Sbjct: 160 VHRDLAARNCMLDEKFTVKVADFGL-----ARDMYDKEFDSVHNKTG 201
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 19/167 (11%)
Query: 494 GQIYKGKL--TDGTLV--AIRSL-KMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G +Y G L DG + A++SL +++ + ++ H N++S LG CL
Sbjct: 103 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR- 161
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
S P + + Y + LR+FI + T I + + KG++FL +
Sbjct: 162 SEGSPLV-----VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKF 213
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS 655
+L + +LDE F VK+ + L AR E S KT
Sbjct: 214 VHRDLAARNCMLDEKFTVKVADFGL-----ARDMYDKEFDSVHNKTG 255
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 98/250 (39%), Gaps = 35/250 (14%)
Query: 507 VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAP 566
VAI+ ++ +S + + +S++ H N+V G CL+ + L+ EYA
Sbjct: 35 VAIKQIE--SESERKAFIVELRQLSRVNHPNIVKLYGACLN---------PVCLVMEYAE 83
Query: 567 NETLRSFISG--PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF 624
+L + + G P T ++ + +GV +LH+ + +LK ++LL
Sbjct: 84 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG 143
Query: 625 HV-KINSYNLPLLAEAR---GKGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXX 680
V KI + + KGSA +P V + +K DV+
Sbjct: 144 TVLKICDFGTACDIQTHMTNNKGSAAWMAP----EVFEGSNYSEKCDVFSWGIILWEVIT 199
Query: 681 XXXXTSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMME-LCLRCLSNEP 739
E + + V+ GT P + N L + +E L RC S +P
Sbjct: 200 RRKPFDEIGGPAFRIMWAVHNGTR-------PPLIKN------LPKPIESLMTRCWSKDP 246
Query: 740 KDRPSVEDTL 749
RPS+E+ +
Sbjct: 247 SQRPSMEEIV 256
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 19/167 (11%)
Query: 494 GQIYKGKL--TDGTLV--AIRSL-KMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G +Y G L DG + A++SL +++ + ++ H N++S LG CL
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR- 102
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
S P + + Y + LR+FI + T I + + KG++FL +
Sbjct: 103 SEGSPLV-----VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKF 154
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS 655
+L + +LDE F VK+ + L AR E S KT
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGL-----ARDMYDKEFDSVHNKTG 196
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 28/169 (16%)
Query: 462 ASLPAYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKK 517
A +P R FT+D+ FD + G +Y + + A++ L ++ K+
Sbjct: 4 AEMPK-RKFTIDD-------FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKE 55
Query: 518 SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGP 577
H IE+ S LRH N++ + D IYL+ E+AP L +
Sbjct: 56 GVEHQLRREIEIQSHLRHPNILRMYNYFHDRKR-------IYLMLEFAPRGELYKELQKH 108
Query: 578 G-----YKLTWVQRIAAAIAIVKGVQFLHTGIVPG----VFSNNLKITD 617
G T+++ +A A+ + +H I P + LKI D
Sbjct: 109 GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIAD 157
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 19/167 (11%)
Query: 494 GQIYKGKL--TDGTLV--AIRSL-KMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G +Y G L DG + A++SL +++ + ++ H N++S LG CL
Sbjct: 45 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR- 103
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
S P + + Y + LR+FI + T I + + KG++FL +
Sbjct: 104 SEGSPLV-----VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKF 155
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS 655
+L + +LDE F VK+ + L AR E S KT
Sbjct: 156 VHRDLAARNCMLDEKFTVKVADFGL-----ARDMLDKEFDSVHNKTG 197
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 98/250 (39%), Gaps = 35/250 (14%)
Query: 507 VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAP 566
VAI+ ++ +S + + +S++ H N+V G CL+ + L+ EYA
Sbjct: 34 VAIKQIE--SESERKAFIVELRQLSRVNHPNIVKLYGACLN---------PVCLVMEYAE 82
Query: 567 NETLRSFISG--PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF 624
+L + + G P T ++ + +GV +LH+ + +LK ++LL
Sbjct: 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG 142
Query: 625 HV-KINSYNLPLLAEAR---GKGSAEVSSPAKKTSVLARTEQDDKSDVYDXXXXXXXXXX 680
V KI + + KGSA +P V + +K DV+
Sbjct: 143 TVLKICDFGTACDIQTHMTNNKGSAAWMAP----EVFEGSNYSEKCDVFSWGIILWEVIT 198
Query: 681 XXXXTSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMME-LCLRCLSNEP 739
E + + V+ GT P + N L + +E L RC S +P
Sbjct: 199 RRKPFDEIGGPAFRIMWAVHNGTR-------PPLIKN------LPKPIESLMTRCWSKDP 245
Query: 740 KDRPSVEDTL 749
RPS+E+ +
Sbjct: 246 SQRPSMEEIV 255
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 491 ASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
S G +YKGK V + ++ + + ++ K RH N++ +G+
Sbjct: 39 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS----- 93
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
P ++I+ ++ +L + K ++ I A +G+ +LH +
Sbjct: 94 TKPQLAIVT---QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIH 147
Query: 611 NNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAE 646
+LK ++ L E+ VKI + L ++R GS +
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLA-TEKSRWSGSHQ 182
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 491 ASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
S G +YKGK V + ++ + + ++ K RH N++ +G+
Sbjct: 23 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST---- 78
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
P ++I+ ++ +L + K + I A +G+ +LH +
Sbjct: 79 -KPQLAIVT---QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIH 131
Query: 611 NNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAE 646
+LK ++ L E+ VKI + L + ++R GS +
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATV-KSRWSGSHQ 166
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 70/158 (44%), Gaps = 16/158 (10%)
Query: 491 ASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTY--HIELISKLRHSNLVSALGHCLDF 548
S G +YKGK VA++ L ++ + + + + ++ K RH N++ +G+
Sbjct: 19 GSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS--- 73
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
P ++I+ ++ +L + K ++ I A +G+ +LH +
Sbjct: 74 --TKPQLAIVT---QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSI 125
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAE 646
+LK ++ L E+ VKI + L ++R GS +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLA-TEKSRWSGSHQ 162
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 102/269 (37%), Gaps = 41/269 (15%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y G +L VA+++LK + ++ +++H NLV LG C +
Sbjct: 43 GQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---T 98
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLHT 602
L+ P Y++ EY P L ++ + L +I++A+ ++ F+H
Sbjct: 99 LEPP----FYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIH- 153
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLAR 659
+L + L+ EN VK+ + L L+ A P K T+ LA
Sbjct: 154 --------RDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 205
Query: 660 TEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNEC 719
KSDV+ + DL QV +++ E
Sbjct: 206 NTFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQVY--------DLLEKGYRMEQ 252
Query: 720 SDESLKRMMELCLRCLSNEPKDRPSVEDT 748
+ ++ EL C P DRPS +T
Sbjct: 253 PEGCPPKVYELMRACWKWSPADRPSFAET 281
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 490 DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH---SNLVSALGHCL 546
D G+I G+ + T+V R L S++ Y I+++ K RH N V +
Sbjct: 11 DFKFGKIL-GEGSFSTVVLARELATSRE-------YAIKILEK-RHIIKENKVPYVTRER 61
Query: 547 DF--SLDDPSISIIYLIFE----------YAPNETLRSFISGPGYKLTWVQRIAAAIAIV 594
D LD P +Y F+ YA N L +I G R A IV
Sbjct: 62 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIV 120
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT 654
+++LH G+ +LK ++LL+E+ H++I + G+A+V SP K
Sbjct: 121 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDF-----------GTAKVLSPESKQ 166
Query: 655 S 655
+
Sbjct: 167 A 167
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 491 ASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
S G +YKGK V + ++ + + ++ K RH N++ +G+
Sbjct: 47 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS----- 101
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
P ++I+ ++ +L + K ++ I A +G+ +LH +
Sbjct: 102 TKPQLAIVT---QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIH 155
Query: 611 NNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAE 646
+LK ++ L E+ VKI + L ++R GS +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLA-TEKSRWSGSHQ 190
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 490 DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH---SNLVSALGHCL 546
D G+I G+ + T+V R L S++ Y I+++ K RH N V +
Sbjct: 10 DFKFGKIL-GEGSFSTVVLARELATSRE-------YAIKILEK-RHIIKENKVPYVTRER 60
Query: 547 DF--SLDDPSISIIYLIFE----------YAPNETLRSFISGPGYKLTWVQRIAAAIAIV 594
D LD P +Y F+ YA N L +I G R A IV
Sbjct: 61 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIV 119
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT 654
+++LH G+ +LK ++LL+E+ H++I + G+A+V SP K
Sbjct: 120 SALEYLHGK---GIIHRDLKPENILLNEDMHIQITDF-----------GTAKVLSPESKQ 165
Query: 655 S 655
+
Sbjct: 166 A 166
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 490 DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH---SNLVSALGHCL 546
D G+I G+ + T+V R L S++ Y I+++ K RH N V +
Sbjct: 9 DFKFGKIL-GEGSFSTVVLARELATSRE-------YAIKILEK-RHIIKENKVPYVTRER 59
Query: 547 DF--SLDDPSISIIYLIFE----------YAPNETLRSFISGPGYKLTWVQRIAAAIAIV 594
D LD P +Y F+ YA N L +I G R A IV
Sbjct: 60 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIV 118
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT 654
+++LH G+ +LK ++LL+E+ H++I + G+A+V SP K
Sbjct: 119 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDF-----------GTAKVLSPESKQ 164
Query: 655 S 655
+
Sbjct: 165 A 165
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 490 DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH---SNLVSALGHCL 546
D G+I G+ + T+V R L S++ Y I+++ K RH N V +
Sbjct: 8 DFKFGKIL-GEGSFSTVVLARELATSRE-------YAIKILEK-RHIIKENKVPYVTRER 58
Query: 547 DF--SLDDPSISIIYLIFE----------YAPNETLRSFISGPGYKLTWVQRIAAAIAIV 594
D LD P +Y F+ YA N L +I G R A IV
Sbjct: 59 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIV 117
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT 654
+++LH G+ +LK ++LL+E+ H++I + G+A+V SP K
Sbjct: 118 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDF-----------GTAKVLSPESKQ 163
Query: 655 S 655
+
Sbjct: 164 A 164
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 13/153 (8%)
Query: 504 GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFE 563
G ++ ++ L + + + ++++ L H N++ +G D ++ I E
Sbjct: 35 GEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG----VLYKDKRLNFIT---E 87
Query: 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623
Y TLR I + W QR++ A I G+ +LH+ + +L + L+ EN
Sbjct: 88 YIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVREN 144
Query: 624 FHVKINSYNLPLL---AEARGKGSAEVSSPAKK 653
+V + + L L + + +G + P +K
Sbjct: 145 KNVVVADFGLARLMVDEKTQPEGLRSLKKPDRK 177
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 490 DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH---SNLVSALGHCL 546
D G+I G+ + T+V R L S++ Y I+++ K RH N V +
Sbjct: 30 DFKFGKIL-GEGSFSTVVLARELATSRE-------YAIKILEK-RHIIKENKVPYVTRER 80
Query: 547 DF--SLDDPSISIIYLIFE----------YAPNETLRSFISGPGYKLTWVQRIAAAIAIV 594
D LD P +Y F+ YA N L +I G R A IV
Sbjct: 81 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIV 139
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT 654
+++LH G+ +LK ++LL+E+ H++I + G+A+V SP K
Sbjct: 140 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDF-----------GTAKVLSPESKQ 185
Query: 655 S 655
+
Sbjct: 186 A 186
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 490 DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH---SNLVSALGHCL 546
D G+I G+ + T+V R L S++ Y I+++ K RH N V +
Sbjct: 30 DFKFGKIL-GEGSFSTVVLARELATSRE-------YAIKILEK-RHIIKENKVPYVTRER 80
Query: 547 DF--SLDDPSISIIYLIFE----------YAPNETLRSFISGPGYKLTWVQRIAAAIAIV 594
D LD P +Y F+ YA N L +I G R A IV
Sbjct: 81 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIV 139
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT 654
+++LH G+ +LK ++LL+E+ H++I + G+A+V SP K
Sbjct: 140 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDF-----------GTAKVLSPESKQ 185
Query: 655 S 655
+
Sbjct: 186 A 186
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 28/169 (16%)
Query: 462 ASLPAYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKK 517
A +P R FT+D+ FD + G +Y + + A++ L ++ K+
Sbjct: 4 AEMPK-RKFTIDD-------FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKE 55
Query: 518 SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGP 577
H IE+ S LRH N++ + D IYL+ E+AP L +
Sbjct: 56 GVEHQLRREIEIQSHLRHPNILRMYNYFHDRKR-------IYLMLEFAPRGELYKELQKH 108
Query: 578 G-----YKLTWVQRIAAAIAIVKGVQFLHTGIVPG----VFSNNLKITD 617
G T+++ +A A+ + +H I P + LKI D
Sbjct: 109 GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIAD 157
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 490 DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH---SNLVSALGHCL 546
D G+I G+ + T+V R L S++ Y I+++ K RH N V +
Sbjct: 15 DFKFGKIL-GEGSFSTVVLARELATSRE-------YAIKILEK-RHIIKENKVPYVTRER 65
Query: 547 DF--SLDDPSISIIYLIFE----------YAPNETLRSFISGPGYKLTWVQRIAAAIAIV 594
D LD P +Y F+ YA N L +I G R A IV
Sbjct: 66 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIV 124
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT 654
+++LH G+ +LK ++LL+E+ H++I + G+A+V SP K
Sbjct: 125 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDF-----------GTAKVLSPESKQ 170
Query: 655 S 655
+
Sbjct: 171 A 171
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 490 DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH---SNLVSALGHCL 546
D G+I G+ + T+V R L S++ Y I+++ K RH N V +
Sbjct: 31 DFKFGKIL-GEGSFSTVVLARELATSRE-------YAIKILEK-RHIIKENKVPYVTRER 81
Query: 547 DF--SLDDPSISIIYLIFE----------YAPNETLRSFISGPGYKLTWVQRIAAAIAIV 594
D LD P +Y F+ YA N L +I G R A IV
Sbjct: 82 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIV 140
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT 654
+++LH G+ +LK ++LL+E+ H++I + G+A+V SP K
Sbjct: 141 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDF-----------GTAKVLSPESKQ 186
Query: 655 S 655
+
Sbjct: 187 A 187
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 490 DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH---SNLVSALGHCL 546
D G+I G+ + T+V R L S++ Y I+++ K RH N V +
Sbjct: 33 DFKFGKIL-GEGSFSTVVLARELATSRE-------YAIKILEK-RHIIKENKVPYVTRER 83
Query: 547 DF--SLDDPSISIIYLIFE----------YAPNETLRSFISGPGYKLTWVQRIAAAIAIV 594
D LD P +Y F+ YA N L +I G R A IV
Sbjct: 84 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIV 142
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT 654
+++LH G+ +LK ++LL+E+ H++I + G+A+V SP K
Sbjct: 143 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDF-----------GTAKVLSPESKQ 188
Query: 655 S 655
+
Sbjct: 189 A 189
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 68/164 (41%), Gaps = 30/164 (18%)
Query: 490 DASHGQIYKGKLTDGTL---VAIRSLKMSKKSSPHM-YTYHIELISKL-RHSNLVSALGH 544
+ + GQ+ K ++ L AI+ +K H + +E++ KL H N+++ LG
Sbjct: 35 EGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGA 94
Query: 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFI-------SGPGYK--------LTWVQRIAA 589
C +YL EYAP+ L F+ + P + L+ Q +
Sbjct: 95 C-------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 590 AIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633
A + +G+ +L +L ++L+ EN+ KI + L
Sbjct: 148 AADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL 188
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 19/167 (11%)
Query: 494 GQIYKGKL--TDGTLV--AIRSL-KMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G +Y G L DG + A++SL +++ + ++ H N++S LG CL
Sbjct: 43 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR- 101
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
S P + + Y + LR+FI + T I + + KG+++L +
Sbjct: 102 SEGSPLV-----VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKF 153
Query: 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTS 655
+L + +LDE F VK+ + L AR E S KT
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGL-----ARDMYDKEXXSVHNKTG 195
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 490 DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH---SNLVSALGHCL 546
D G+I G+ + T+V R L S++ Y I+++ K RH N V +
Sbjct: 31 DFKFGKIL-GEGSFSTVVLARELATSRE-------YAIKILEK-RHIIKENKVPYVTRER 81
Query: 547 DF--SLDDPSISIIYLIFE----------YAPNETLRSFISGPGYKLTWVQRIAAAIAIV 594
D LD P +Y F+ YA N L +I G R A IV
Sbjct: 82 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIV 140
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT 654
+++LH G+ +LK ++LL+E+ H++I + G+A+V SP K
Sbjct: 141 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDF-----------GTAKVLSPESKQ 186
Query: 655 S 655
+
Sbjct: 187 A 187
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 490 DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH---SNLVSALGHCL 546
D G+I G+ + T+V R L S++ Y I+++ K RH N V +
Sbjct: 33 DFKFGKIL-GEGSFSTVVLARELATSRE-------YAIKILEK-RHIIKENKVPYVTRER 83
Query: 547 DF--SLDDPSISIIYLIFE----------YAPNETLRSFISGPGYKLTWVQRIAAAIAIV 594
D LD P +Y F+ YA N L +I G R A IV
Sbjct: 84 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIV 142
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT 654
+++LH G+ +LK ++LL+E+ H++I + G+A+V SP K
Sbjct: 143 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDF-----------GTAKVLSPESKQ 188
Query: 655 S 655
+
Sbjct: 189 A 189
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 490 DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH---SNLVSALGHCL 546
D G+I G+ + T+V R L S++ Y I+++ K RH N V +
Sbjct: 34 DFKFGKIL-GEGSFSTVVLARELATSRE-------YAIKILEK-RHIIKENKVPYVTRER 84
Query: 547 DF--SLDDPSISIIYLIFE----------YAPNETLRSFISGPGYKLTWVQRIAAAIAIV 594
D LD P +Y F+ YA N L +I G R A IV
Sbjct: 85 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIV 143
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT 654
+++LH G+ +LK ++LL+E+ H++I + G+A+V SP K
Sbjct: 144 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDF-----------GTAKVLSPESKQ 189
Query: 655 S 655
+
Sbjct: 190 A 190
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 490 DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH---SNLVSALGHCL 546
D G+I G+ + T+V R L S++ Y I+++ K RH N V +
Sbjct: 33 DFKFGKIL-GEGSFSTVVLARELATSRE-------YAIKILEK-RHIIKENKVPYVTRER 83
Query: 547 DF--SLDDPSISIIYLIFE----------YAPNETLRSFISGPGYKLTWVQRIAAAIAIV 594
D LD P +Y F+ YA N L +I G R A IV
Sbjct: 84 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIV 142
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT 654
+++LH G+ +LK ++LL+E+ H++I + G+A+V SP K
Sbjct: 143 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDF-----------GTAKVLSPESKQ 188
Query: 655 S 655
+
Sbjct: 189 A 189
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 68/164 (41%), Gaps = 30/164 (18%)
Query: 490 DASHGQIYKGKLTDGTL---VAIRSLKMSKKSSPHM-YTYHIELISKL-RHSNLVSALGH 544
+ + GQ+ K ++ L AI+ +K H + +E++ KL H N+++ LG
Sbjct: 25 EGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGA 84
Query: 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFI-------SGPGYK--------LTWVQRIAA 589
C +YL EYAP+ L F+ + P + L+ Q +
Sbjct: 85 C-------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 137
Query: 590 AIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633
A + +G+ +L +L ++L+ EN+ KI + L
Sbjct: 138 AADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL 178
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 490 DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH---SNLVSALGHCL 546
D G+I G+ + T+V R L S++ Y I+++ K RH N V +
Sbjct: 31 DFKFGKIL-GEGSFSTVVLARELATSRE-------YAIKILEK-RHIIKENKVPYVTRER 81
Query: 547 DF--SLDDPSISIIYLIFE----------YAPNETLRSFISGPGYKLTWVQRIAAAIAIV 594
D LD P +Y F+ YA N L +I G R A IV
Sbjct: 82 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIV 140
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT 654
+++LH G+ +LK ++LL+E+ H++I + G+A+V SP K
Sbjct: 141 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDF-----------GTAKVLSPESKQ 186
Query: 655 S 655
+
Sbjct: 187 A 187
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 490 DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH---SNLVSALGHCL 546
D G+I G+ + T+V R L S++ Y I+++ K RH N V +
Sbjct: 38 DFKFGKIL-GEGSFSTVVLARELATSRE-------YAIKILEK-RHIIKENKVPYVTRER 88
Query: 547 DF--SLDDPSISIIYLIFE----------YAPNETLRSFISGPGYKLTWVQRIAAAIAIV 594
D LD P +Y F+ YA N L +I G R A IV
Sbjct: 89 DVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIV 147
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT 654
+++LH G+ +LK ++LL+E+ H++I + G+A+V SP K
Sbjct: 148 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDF-----------GTAKVLSPESKQ 193
Query: 655 S 655
+
Sbjct: 194 A 194
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 490 DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH---SNLVSALGHCL 546
D G+I G+ + T+V R L S++ Y I+++ K RH N V +
Sbjct: 34 DFKFGKIL-GEGSFSTVVLARELATSRE-------YAIKILEK-RHIIKENKVPYVTRER 84
Query: 547 DF--SLDDPSISIIYLIFE----------YAPNETLRSFISGPGYKLTWVQRIAAAIAIV 594
D LD P +Y F+ YA N L +I G R A IV
Sbjct: 85 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIV 143
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT 654
+++LH G+ +LK ++LL+E+ H++I + G+A+V SP K
Sbjct: 144 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDF-----------GTAKVLSPESKQ 189
Query: 655 S 655
+
Sbjct: 190 A 190
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 491 ASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
S G +YKGK V + ++ + + ++ K RH N++ +G+
Sbjct: 35 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST---- 90
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
P ++I+ ++ +L + K + I A +G+ +LH +
Sbjct: 91 -KPQLAIVT---QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIH 143
Query: 611 NNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAE 646
+LK ++ L E+ VKI + L ++R GS +
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLA-TEKSRWSGSHQ 178
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 590 AIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633
A I+ G+QFLH+ G+ +LK+ ++LLD++ H+KI + +
Sbjct: 125 AAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGM 165
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 590 AIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633
A I+ G+QFLH+ G+ +LK+ ++LLD++ H+KI + +
Sbjct: 124 AAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGM 164
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 490 DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH---SNLVSALGHCL 546
D G+I G+ + T+V R L S++ Y I+++ K RH N V +
Sbjct: 33 DFKFGKIL-GEGSFSTVVLARELATSRE-------YAIKILEK-RHIIKENKVPYVTRER 83
Query: 547 DF--SLDDPSISIIYLIFE----------YAPNETLRSFISGPGYKLTWVQRIAAAIAIV 594
D LD P +Y F+ YA N L +I G R A IV
Sbjct: 84 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTA-EIV 142
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT 654
+++LH G+ +LK ++LL+E+ H++I + G+A+V SP K
Sbjct: 143 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDF-----------GTAKVLSPESKQ 188
Query: 655 S 655
+
Sbjct: 189 A 189
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 494 GQIYKGKL--TDGTLV--AIRSL-KMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G +Y G L DG + A++SL +++ + ++ H N++S LG CL
Sbjct: 62 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR- 120
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
S P + + Y + LR+FI + T I + + KG+++L +
Sbjct: 121 SEGSPLV-----VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKF 172
Query: 609 FSNNLKITDVLLDENFHVKINSYNL 633
+L + +LDE F VK+ + L
Sbjct: 173 VHRDLAARNCMLDEKFTVKVADFGL 197
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 490 DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH---SNLVSALGHCL 546
D G+I G+ + T+V R L S++ Y I+++ K RH N V +
Sbjct: 33 DFKFGKIL-GEGSFSTVVLARELATSRE-------YAIKILEK-RHIIKENKVPYVTRER 83
Query: 547 DF--SLDDPSISIIYLIFE----------YAPNETLRSFISGPGYKLTWVQRIAAAIAIV 594
D LD P +Y F+ YA N L +I G R A IV
Sbjct: 84 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIV 142
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT 654
+++LH G+ +LK ++LL+E+ H++I + G+A+V SP K
Sbjct: 143 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDF-----------GTAKVLSPESKQ 188
Query: 655 S 655
+
Sbjct: 189 A 189
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 22/128 (17%)
Query: 528 ELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRI 587
+++S+L H V L F+ D +Y YA N L +I G R
Sbjct: 82 DVMSRLDHPFFVK-----LYFTFQDDEK--LYFGLSYAKNGELLKYIRKIGSFDETCTRF 134
Query: 588 AAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEV 647
A IV +++LH G+ +LK ++LL+E+ H++I + G+A+V
Sbjct: 135 YTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDF-----------GTAKV 179
Query: 648 SSPAKKTS 655
SP K +
Sbjct: 180 LSPESKQA 187
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 490 DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH---SNLVSALGHCL 546
D G+I G+ + T+V R L S++ Y I+++ K RH N V +
Sbjct: 33 DFKFGKIL-GEGSFSTVVLARELATSRE-------YAIKILEK-RHIIKENKVPYVTRER 83
Query: 547 DF--SLDDPSISIIYLIFE----------YAPNETLRSFISGPGYKLTWVQRIAAAIAIV 594
D LD P +Y F+ YA N L +I G R A IV
Sbjct: 84 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIV 142
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT 654
+++LH G+ +LK ++LL+E+ H++I + G+A+V SP K
Sbjct: 143 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDF-----------GTAKVLSPESKQ 188
Query: 655 S 655
+
Sbjct: 189 A 189
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 494 GQIYKGKL--TDGTLV--AIRSL-KMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G +Y G L DG + A++SL +++ + ++ H N++S LG CL
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR- 102
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
S P + + Y + LR+FI + T I + + KG+++L +
Sbjct: 103 SEGSPLV-----VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKF 154
Query: 609 FSNNLKITDVLLDENFHVKINSYNL 633
+L + +LDE F VK+ + L
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGL 179
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 39/181 (21%)
Query: 490 DASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH---SNLVSALGHCL 546
D G+I G+ + T+V R L S++ Y I+++ K RH N V +
Sbjct: 36 DFKFGKIL-GEGSFSTVVLARELATSRE-------YAIKILEK-RHIIKENKVPYVTRER 86
Query: 547 DF--SLDDPSISIIYLIFE----------YAPNETLRSFISGPGYKLTWVQRIAAAIAIV 594
D LD P +Y F+ YA N L +I G R A IV
Sbjct: 87 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIV 145
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKT 654
+++LH G+ +LK ++LL+E+ H++I + G+A+V SP K
Sbjct: 146 SALEYLHG---KGIIHRDLKPENILLNEDMHIQITDF-----------GTAKVLSPESKQ 191
Query: 655 S 655
+
Sbjct: 192 A 192
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 494 GQIYKGKL--TDGTLV--AIRSL-KMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G +Y G L DG + A++SL +++ + ++ H N++S LG CL
Sbjct: 63 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR- 121
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
S P + + Y + LR+FI + T I + + KG+++L +
Sbjct: 122 SEGSPLV-----VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKF 173
Query: 609 FSNNLKITDVLLDENFHVKINSYNL 633
+L + +LDE F VK+ + L
Sbjct: 174 VHRDLAARNCMLDEKFTVKVADFGL 198
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 494 GQIYKGKL--TDGTLV--AIRSL-KMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G +Y G L DG + A++SL +++ + ++ H N++S LG CL
Sbjct: 36 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR- 94
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
S P + + Y + LR+FI + T I + + KG+++L +
Sbjct: 95 SEGSPLV-----VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKF 146
Query: 609 FSNNLKITDVLLDENFHVKINSYNL 633
+L + +LDE F VK+ + L
Sbjct: 147 VHRDLAARNCMLDEKFTVKVADFGL 171
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 494 GQIYKGKL--TDGTLV--AIRSL-KMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G +Y G L DG + A++SL +++ + ++ H N++S LG CL
Sbjct: 43 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR- 101
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
S P + + Y + LR+FI + T I + + KG+++L +
Sbjct: 102 SEGSPLV-----VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKF 153
Query: 609 FSNNLKITDVLLDENFHVKINSYNL 633
+L + +LDE F VK+ + L
Sbjct: 154 VHRDLAARNCMLDEKFTVKVADFGL 178
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 494 GQIYKGKL--TDGTLV--AIRSL-KMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G +Y G L DG + A++SL +++ + ++ H N++S LG CL
Sbjct: 41 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR- 99
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
S P + + Y + LR+FI + T I + + KG+++L +
Sbjct: 100 SEGSPLV-----VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKF 151
Query: 609 FSNNLKITDVLLDENFHVKINSYNL 633
+L + +LDE F VK+ + L
Sbjct: 152 VHRDLAARNCMLDEKFTVKVADFGL 176
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 494 GQIYKGKL--TDGTLV--AIRSL-KMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G +Y G L DG + A++SL +++ + ++ H N++S LG CL
Sbjct: 42 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR- 100
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
S P + + Y + LR+FI + T I + + KG+++L +
Sbjct: 101 SEGSPLV-----VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKF 152
Query: 609 FSNNLKITDVLLDENFHVKINSYNL 633
+L + +LDE F VK+ + L
Sbjct: 153 VHRDLAARNCMLDEKFTVKVADFGL 177
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 503 DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIF 562
D LVA+++LK ++ + EL++ L+H ++V G C D DP I ++F
Sbjct: 44 DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGD---GDPLI----MVF 96
Query: 563 EYAPNETLRSFISGPG 578
EY + L F+ G
Sbjct: 97 EYMKHGDLNKFLRAHG 112
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 491 ASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
S G +YKGK V + ++ + + ++ K RH N++ +G+
Sbjct: 35 GSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST---- 90
Query: 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFS 610
P ++I+ ++ +L + K + I A +G+ +LH +
Sbjct: 91 -APQLAIVT---QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIH 143
Query: 611 NNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAE 646
+LK ++ L E+ VKI + L ++R GS +
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLA-TEKSRWSGSHQ 178
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNL 613
++ +Y + EY L I G K Q + A I G+ FLH G+ +L
Sbjct: 91 TVDRLYFVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISIGLFFLHKR---GIIYRDL 146
Query: 614 KITDVLLDENFHVKINSYNL 633
K+ +V+LD H+KI + +
Sbjct: 147 KLDNVMLDSEGHIKIADFGM 166
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 494 GQIYKGKL--TDGTLV--AIRSL-KMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G +Y G L DG + A++SL +++ + ++ H N++S LG CL
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR- 102
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
S P + + Y + LR+FI + T I + + KG+++L +
Sbjct: 103 SEGSPLV-----VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKF 154
Query: 609 FSNNLKITDVLLDENFHVKINSYNL 633
+L + +LDE F VK+ + L
Sbjct: 155 VHRDLAARNCMLDEKFTVKVADFGL 179
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 35.8 bits (81), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 28/181 (15%)
Query: 464 LPAYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSS 519
L + R +TL++ FD + G +Y + + A++ L ++ K
Sbjct: 3 LGSKRQWTLED-------FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGV 55
Query: 520 PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGY 579
H +E+ S LRH N++ G+ D + +YLI EYAP T+ +
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQ---- 104
Query: 580 KLTWV--QRIAAAIA-IVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636
KL+ QR A I + + + H+ V ++K ++LL N +KI + +
Sbjct: 105 KLSRFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVH 161
Query: 637 A 637
A
Sbjct: 162 A 162
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 28/181 (15%)
Query: 464 LPAYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSS 519
L + R +TL++ FD + G +Y + + A++ L ++ K
Sbjct: 3 LGSKRQWTLED-------FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGV 55
Query: 520 PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGY 579
H +E+ S LRH N++ G+ D + +YLI EYAP T+ +
Sbjct: 56 EHQLRREVEIQSHLRHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQ---- 104
Query: 580 KLTWV--QRIAAAIA-IVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636
KL+ QR A I + + + H+ V ++K ++LL N +KI + +
Sbjct: 105 KLSRFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVH 161
Query: 637 A 637
A
Sbjct: 162 A 162
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 35.8 bits (81), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 75/149 (50%), Gaps = 15/149 (10%)
Query: 488 MCDASHGQIYKGK--LTDGTLVAIRSLKMS-KKSSPHMYTYHIELISKLRHSNLVSALGH 544
+ + ++ +YKGK LTD LVA++ +++ ++ +P + L+ L+H+N+V+
Sbjct: 10 LGEGTYATVYKGKSKLTD-NLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVT---- 64
Query: 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI 604
D + S++ L+FEY ++ L+ ++ G + +++G+ + H
Sbjct: 65 LHDIIHTEKSLT---LVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR-- 118
Query: 605 VPGVFSNNLKITDVLLDENFHVKINSYNL 633
V +LK ++L++E +K+ + L
Sbjct: 119 -QKVLHRDLKPQNLLINERGELKLADFGL 146
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 494 GQIYKGKL--TDGTLV--AIRSL-KMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
G +Y G L DG + A++SL +++ + ++ H N++S LG CL
Sbjct: 39 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR- 97
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608
S P + + Y + LR+FI + T I + + KG+++L +
Sbjct: 98 SEGSPLV-----VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKF 149
Query: 609 FSNNLKITDVLLDENFHVKINSYNL 633
+L + +LDE F VK+ + L
Sbjct: 150 VHRDLAARNCMLDEKFTVKVADFGL 174
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 75/166 (45%), Gaps = 12/166 (7%)
Query: 475 LKEATDCFDSSSFMCDASHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
L+ A+D F+ + + + GQ+ K + D AI+ ++ +++ + + + L++ L
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVXLLASL 59
Query: 534 RHSNLVSALGHCLD---FSLDDPSI---SIIYLIFEYAPNETLRSFISGPGYKLTWVQRI 587
H +V L+ F ++ S +++ EY N TL I +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 588 AAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633
I++ + ++H+ G+ NLK ++ +DE+ +VKI + L
Sbjct: 120 RLFRQILEALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGL 162
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 24/264 (9%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLD 547
S +YKG T+ T+ VA L+ K KS + E + L+H N+V
Sbjct: 37 GSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD---S 93
Query: 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAI-AIVKGVQFLHTGIVP 606
+ I L+ E + TL++++ +K+ ++ + + I+KG+QFLHT P
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKR--FKVXKIKVLRSWCRQILKGLQFLHTR-TP 150
Query: 607 GVFSNNLKITDVLL-DENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDK 665
+ +LK ++ + VKI L L A A + +P + D+
Sbjct: 151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA-SFAKAVIGTPEFXAPEXYEEKYDES 209
Query: 666 SDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLK 725
DVY TSE ++ Q+ S V PA ++ + +K
Sbjct: 210 VDVY-----AFGXCXLEXATSEYPYSECQNAAQIY----RRVTSGVKPASFDKVAIPEVK 260
Query: 726 RMMELCLRCLSNEPKDRPSVEDTL 749
++E C+R +E R S++D L
Sbjct: 261 EIIEGCIRQNKDE---RYSIKDLL 281
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 12/149 (8%)
Query: 491 ASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
G+++ G + T VA+++LK S + L+ L+H LV +
Sbjct: 24 GQFGEVWMGYYNNSTKVAVKTLKPGTMSV-QAFLEEANLMKTLQHDKLVRLYAVV---TR 79
Query: 551 DDPSISIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVF 609
++P IY+I EY +L F+ S G K+ + I + I +G+ ++
Sbjct: 80 EEP----IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYI 132
Query: 610 SNNLKITDVLLDENFHVKINSYNLPLLAE 638
+L+ +VL+ E+ KI + L + E
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIE 161
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 14/179 (7%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G ++ G + VAI+++K S + E++ KL H LV G CL+ P
Sbjct: 41 GLVHLGYWLNKDKVAIKTIKEGSMSEDD-FIEEAEVMMKLSHPKLVQLYGVCLE---QAP 96
Query: 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNL 613
I L+FE+ + L ++ + + + +G+ +L V +L
Sbjct: 97 ----ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 149
Query: 614 KITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLARTEQDDKSDVY 669
+ L+ EN +K++ + + + + + S P K S V + + KSDV+
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 208
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 74/179 (41%), Gaps = 14/179 (7%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G + GK VA++ +K S + + + KL H LV G C S + P
Sbjct: 22 GVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQ-EAQTMMKLSHPKLVKFYGVC---SKEYP 77
Query: 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNL 613
IY++ EY N L +++ G L Q + + +G+ FL + +L
Sbjct: 78 ----IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDL 130
Query: 614 KITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLARTEQDDKSDVY 669
+ L+D + VK++ + + + + + S P K ++ V + KSDV+
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVW 189
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 67/156 (42%), Gaps = 22/156 (14%)
Query: 491 ASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
+G +YKG L D VA++ + + + + +I + + H N+ F +
Sbjct: 24 GRYGAVYKGSL-DERPVAVKVFSFANRQN-FINEKNIYRVPLMEHDNIAR-------FIV 74
Query: 551 DDPSISI-----IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI- 604
D ++ L+ EY PN +L ++S + WV A ++ +G+ +LHT +
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSL--HTSDWVSSCRLAHSVTRGLAYLHTELP 132
Query: 605 -----VPGVFSNNLKITDVLLDENFHVKINSYNLPL 635
P + +L +VL+ + I+ + L +
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSM 168
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFIS-----GPGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 92 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 144
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 145 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 177
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 17/97 (17%)
Query: 528 ELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG----PGYKLTW 583
+L + L+H N+++ G C L +P++ L+ E+A L +SG P + W
Sbjct: 58 KLFAMLKHPNIIALRGVC----LKEPNLC---LVMEFARGGPLNRVLSGKRIPPDILVNW 110
Query: 584 VQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL 620
A+ I +G+ +LH + + +LK +++L+
Sbjct: 111 ------AVQIARGMNYLHDEAIVPIIHRDLKSSNILI 141
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 92 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 144
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 145 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 177
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 74/179 (41%), Gaps = 14/179 (7%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G ++ G + VAI++++ S + E++ KL H LV G CL+ P
Sbjct: 19 GLVHLGYWLNKDKVAIKTIREGAMSEED-FIEEAEVMMKLSHPKLVQLYGVCLE---QAP 74
Query: 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNL 613
I L+FE+ + L ++ + + + +G+ +L V +L
Sbjct: 75 ----ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 127
Query: 614 KITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLARTEQDDKSDVY 669
+ L+ EN +K++ + + + + + S P K S V + + KSDV+
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 186
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 12/79 (15%)
Query: 558 IYLIFEYAPNE---TLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLK 614
+YL+F+Y + +R+ I P V + ++K +++LH+G G+ ++K
Sbjct: 86 VYLVFDYMETDLHAVIRANILEP------VHKQYVVYQLIKVIKYLHSG---GLLHRDMK 136
Query: 615 ITDVLLDENFHVKINSYNL 633
+++LL+ HVK+ + L
Sbjct: 137 PSNILLNAECHVKVADFGL 155
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 56/113 (49%), Gaps = 22/113 (19%)
Query: 527 IELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQR 586
I ++ KL H N+V L LDDP+ +Y++FE GP ++ ++
Sbjct: 87 IAILKKLDHPNVVK-----LVEVLDDPNEDHLYMVFELVNQ--------GPVMEVPTLKP 133
Query: 587 IAAAIA------IVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633
++ A ++KG+++LH + ++K +++L+ E+ H+KI + +
Sbjct: 134 LSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGV 183
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 83 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 135
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 136 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 168
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 74/179 (41%), Gaps = 14/179 (7%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G ++ G + VAI++++ S + E++ KL H LV G CL+ P
Sbjct: 21 GLVHLGYWLNKDKVAIKTIREGAMSEED-FIEEAEVMMKLSHPKLVQLYGVCLE---QAP 76
Query: 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNL 613
I L+FE+ + L ++ + + + +G+ +L V +L
Sbjct: 77 ----ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 129
Query: 614 KITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLARTEQDDKSDVY 669
+ L+ EN +K++ + + + + + S P K S V + + KSDV+
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 74/179 (41%), Gaps = 14/179 (7%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G ++ G + VAI++++ S + E++ KL H LV G CL+ P
Sbjct: 24 GLVHLGYWLNKDKVAIKTIREGAMSEED-FIEEAEVMMKLSHPKLVQLYGVCLE---QAP 79
Query: 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNL 613
I L+FE+ + L ++ + + + +G+ +L V +L
Sbjct: 80 ----ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 132
Query: 614 KITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLARTEQDDKSDVY 669
+ L+ EN +K++ + + + + + S P K S V + + KSDV+
Sbjct: 133 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 191
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 65/155 (41%), Gaps = 14/155 (9%)
Query: 484 SSSFMCDASHGQIYKGKLTDGTL----VAIRSL-KMSKKSSPHMYTYHIELISKLRHSNL 538
S + G +Y G+ D AI+SL ++++ + L+ L H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 539 VSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQ 598
++ +G L P + +++ Y + L FI P T I+ + + +G++
Sbjct: 85 LALIGIML------PPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGME 138
Query: 599 FLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633
+L +L + +LDE+F VK+ + L
Sbjct: 139 YLAEQ---KFVHRDLAARNCMLDESFTVKVADFGL 170
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 68 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 120
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 121 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 153
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFIS-----GPGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 66 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 151
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 74/179 (41%), Gaps = 14/179 (7%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G ++ G + VAI++++ S + E++ KL H LV G CL+ P
Sbjct: 21 GLVHLGYWLNKDKVAIKTIREGAMSEED-FIEEAEVMMKLSHPKLVQLYGVCLE---QAP 76
Query: 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNL 613
I L+FE+ + L ++ + + + +G+ +L V +L
Sbjct: 77 ----ICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---SVIHRDL 129
Query: 614 KITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLARTEQDDKSDVY 669
+ L+ EN +K++ + + + + + S P K S V + + KSDV+
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAP-NETLRSFISGPGYK----LTWVQRIA 588
RH N++ G+ D + +YLI EYAP E + + T++ +A
Sbjct: 71 RHPNILRLYGYFHD-------ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELA 123
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 156
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 69 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 154
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 67 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 119
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 152
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 67 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 119
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 152
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 12/149 (8%)
Query: 491 ASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550
G+++ G + T VA+++LK S + L+ L+H LV +
Sbjct: 23 GQFGEVWMGYYNNSTKVAVKTLKPGTMSV-QAFLEEANLMKTLQHDKLVRLYAVV---TK 78
Query: 551 DDPSISIIYLIFEYAPNETLRSFI-SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVF 609
++P IY+I E+ +L F+ S G K+ + I + I +G+ ++
Sbjct: 79 EEP----IYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYI 131
Query: 610 SNNLKITDVLLDENFHVKINSYNLPLLAE 638
+L+ +VL+ E+ KI + L + E
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIE 160
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAP-NETLRSFISGPGYK----LTWVQRIA 588
RH N++ G+ D + +YLI EYAP E + + T++ +A
Sbjct: 71 RHPNILRLYGYFHD-------ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELA 123
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 156
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 66 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 151
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 66 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 151
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 67 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 119
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 152
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 66 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 151
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 71 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 123
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 156
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 71 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 123
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 156
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 71 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 123
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 156
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFIS-----GPGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 69 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 154
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 56/138 (40%), Gaps = 16/138 (11%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 68 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 120
Query: 589 AAIAIVKGVQFLHTGIVP 606
A++ + +H I P
Sbjct: 121 NALSYCHSKRVIHRDIKP 138
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 69 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 154
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 75/166 (45%), Gaps = 12/166 (7%)
Query: 475 LKEATDCFDSSSFMCDASHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
L+ A+D F+ + + + GQ+ K + D AI+ ++ +++ + + + L++ L
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASL 59
Query: 534 RHSNLVSALGHCLDF-SLDDPSISI-----IYLIFEYAPNETLRSFISGPGYKLTWVQRI 587
H +V L+ + P ++ +++ EY N TL I +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 588 AAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633
I++ + ++H+ G+ +LK ++ +DE+ +VKI + L
Sbjct: 120 RLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGL 162
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 69 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 154
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 65 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 117
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 118 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 150
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 69 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 122 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 154
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 23/148 (15%)
Query: 468 RTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGT-LVAIRSL---KMSKKSSPHMY 523
R FT+D+ F+ + G +Y + +VA++ L ++ K+ H
Sbjct: 18 RHFTIDD-------FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQL 70
Query: 524 TYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAP-----NETLRSFISGPG 578
IE+ + L H N++ + D IYLI EYAP E +S
Sbjct: 71 RREIEIQAHLHHPNILRLYNYFYDRRR-------IYLILEYAPRGELYKELQKSCTFDEQ 123
Query: 579 YKLTWVQRIAAAIAIVKGVQFLHTGIVP 606
T ++ +A A+ G + +H I P
Sbjct: 124 RTATIMEELADALMYCHGKKVIHRDIKP 151
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 66 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 151
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 66 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 151
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 62/153 (40%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + + A++ L ++ K H +E+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 66 RHPNILRLYGYFHDSTR-------VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 119 NALSYCHSKKVIHRDIKPENLLLGSAGELKIAD 151
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 56/138 (40%), Gaps = 16/138 (11%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 69 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 121
Query: 589 AAIAIVKGVQFLHTGIVP 606
A++ + +H I P
Sbjct: 122 NALSYCHSKRVIHRDIKP 139
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 66 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 118
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 119 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 151
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 38/191 (19%)
Query: 496 IYKGKLTD-------GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
I KG+ D G VA++ +K ++ + ++++LRHSNLV LG ++
Sbjct: 29 IGKGEFGDVMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE- 85
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLH 601
+Y++ EY +L ++ G L + + A+ ++G F+H
Sbjct: 86 -----EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 140
Query: 602 TGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA---RGKGSAEVSSPAKKTSVLA 658
+L +VL+ E+ K++ + L A + GK + ++P L
Sbjct: 141 ---------RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP----EALR 187
Query: 659 RTEQDDKSDVY 669
+ KSDV+
Sbjct: 188 EKKFSTKSDVW 198
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 38/191 (19%)
Query: 496 IYKGKLTD-------GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
I KG+ D G VA++ +K ++ + ++++LRHSNLV LG ++
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE- 70
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLH 601
+Y++ EY +L ++ G L + + A+ ++G F+H
Sbjct: 71 -----EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 125
Query: 602 TGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA---RGKGSAEVSSPAKKTSVLA 658
+L +VL+ E+ K++ + L A + GK + ++P L
Sbjct: 126 ---------RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP----EALR 172
Query: 659 RTEQDDKSDVY 669
+ KSDV+
Sbjct: 173 EKKFSTKSDVW 183
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 70 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 122
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 123 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 155
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 488 MCDASHGQIYKG-KLTDGTLVAIRSLKM-SKKSSPHMYTYHIELISKLRHSNLVSALGHC 545
+ + ++ +YKG T G VA++ +K+ S++ +P I L+ +L+H N+V
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIV----RL 68
Query: 546 LDFSLDDPSISIIYLIFEYAPNETLRSFISG-------PGYKLTWVQRIAAAIAIVKGVQ 598
D + ++ L+FE+ N+ L+ ++ G +L V+ +++G+
Sbjct: 69 YDVIHTENKLT---LVFEFMDND-LKKYMDSRTVGNTPRGLELNLVKYFQW--QLLQGLA 122
Query: 599 FLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633
F H + +LK ++L+++ +K+ + L
Sbjct: 123 FCHEN---KILHRDLKPQNLLINKRGQLKLGDFGL 154
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 38/191 (19%)
Query: 496 IYKGKLTD-------GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
I KG+ D G VA++ +K ++ + ++++LRHSNLV LG ++
Sbjct: 201 IGKGEFGDVMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE- 257
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLH 601
+Y++ EY +L ++ G L + + A+ ++G F+H
Sbjct: 258 -----EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 312
Query: 602 TGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA---RGKGSAEVSSPAKKTSVLA 658
+L +VL+ E+ K++ + L A + GK + ++P L
Sbjct: 313 ---------RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP----EALR 359
Query: 659 RTEQDDKSDVY 669
+ KSDV+
Sbjct: 360 EKKFSTKSDVW 370
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 79/191 (41%), Gaps = 38/191 (19%)
Query: 496 IYKGKLTD-------GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548
I KG+ D G VA++ +K ++ + ++++LRHSNLV LG ++
Sbjct: 20 IGKGEFGDVMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE- 76
Query: 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLH 601
+Y++ EY +L ++ G L + + A+ ++G F+H
Sbjct: 77 -----EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 131
Query: 602 TGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA---RGKGSAEVSSPAKKTSVLA 658
+L +VL+ E+ K++ + L A + GK + ++P L
Sbjct: 132 ---------RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP----EALR 178
Query: 659 RTEQDDKSDVY 669
KSDV+
Sbjct: 179 EAAFSTKSDVW 189
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 554 SISIIYLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
++ +Y + EY L I G +K AA IAI G+ FL + G+ +
Sbjct: 413 TMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI--GLFFLQS---KGIIYRD 467
Query: 613 LKITDVLLDENFHVKINSYNL 633
LK+ +V+LD H+KI + +
Sbjct: 468 LKLDNVMLDSEGHIKIADFGM 488
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)
Query: 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLV-AIRSL---KMSKKSSPHMYTYHIELISKL 533
A + F+ + G +Y + + A++ L ++ K H +E+ S L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIA 588
RH N++ G+ D + +YLI EYAP T+ + T++ +A
Sbjct: 63 RHPNILRLYGYFHD-------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 115
Query: 589 AAIAIVKGVQFLHTGIVPGVF----SNNLKITD 617
A++ + +H I P + LKI D
Sbjct: 116 NALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 148
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 79/193 (40%), Gaps = 28/193 (14%)
Query: 464 LPAYRTF----TLDELKEATDCF----DSSSFMCDASHGQIYKGKLTDGTL--------- 506
LP RTF T ++ + F D+++ D G G++ G L
Sbjct: 16 LPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 507 VAIRSLKMS-KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYA 565
VAI++LK+ + + ++ + H N++ G + P + ++ EY
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV---TKSKP----VMIVTEYM 128
Query: 566 PNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH 625
N +L SF+ + T +Q + I G+++L G +L ++L++ N
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGFVHRDLAARNILINSNLV 185
Query: 626 VKINSYNLPLLAE 638
K++ + L + E
Sbjct: 186 CKVSDFGLSRVLE 198
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 78/193 (40%), Gaps = 28/193 (14%)
Query: 464 LPAYRTF----TLDELKEATDCF----DSSSFMCDASHGQIYKGKLTDGTL--------- 506
LP RTF T ++ + F D+++ D G G++ G L
Sbjct: 16 LPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 507 VAIRSLKMSKKSSPHM-YTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYA 565
VAI++LK+ + ++ + H N++ G + P + ++ EY
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV---TKSKP----VMIVTEYM 128
Query: 566 PNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH 625
N +L SF+ + T +Q + I G+++L G +L ++L++ N
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLV 185
Query: 626 VKINSYNLPLLAE 638
K++ + L + E
Sbjct: 186 CKVSDFGLARVLE 198
>pdb|2XOT|A Chain A, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
pdb|2XOT|B Chain B, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
Length = 361
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 15/132 (11%)
Query: 199 FLPVSLTGLQSLRVVSLSANHLSGE--IPDLRNLKNLRVFDVQDNYFGPR----FPRLHK 252
+ P LT L SL + N +S E +P + NLR D+ N+ F L +
Sbjct: 58 WTPTRLTNLHSLLLSHNHLNFISSEAFVP----VPNLRYLDLSSNHLHTLDEFLFSDL-Q 112
Query: 253 KMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLN---RFVGPFIPSLLSLPSITYLDIH 309
+ L+L NN ++ + QLQKL +S N RF I LP + LD+
Sbjct: 113 ALEVLLLYNNHIVV-VDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLS 171
Query: 310 GNKLTGLLLQNM 321
NKL L L ++
Sbjct: 172 SNKLKKLPLTDL 183
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 75/166 (45%), Gaps = 12/166 (7%)
Query: 475 LKEATDCFDSSSFMCDASHGQIYKGK-LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL 533
L+ A+D F+ + + + GQ+ K + D AI+ ++ +++ + + + L++ L
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASL 59
Query: 534 RHSNLVSALGHCLDF-SLDDPSISI-----IYLIFEYAPNETLRSFISGPGYKLTWVQRI 587
H +V L+ + P ++ +++ EY N TL I +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 588 AAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633
I++ + ++H+ G+ +LK ++ +DE+ +VKI + L
Sbjct: 120 RLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGL 162
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 79/193 (40%), Gaps = 28/193 (14%)
Query: 464 LPAYRTF----TLDELKEATDCF----DSSSFMCDASHGQIYKGKLTDGTL--------- 506
LP RTF T ++ + F D+++ D G G++ G L
Sbjct: 16 LPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 507 VAIRSLKMS-KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYA 565
VAI++LK+ + + ++ + H N++ G + P + ++ EY
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV---TKSKP----VMIVTEYM 128
Query: 566 PNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH 625
N +L SF+ + T +Q + I G+++L G +L ++L++ N
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLV 185
Query: 626 VKINSYNLPLLAE 638
K++ + L + E
Sbjct: 186 CKVSDFGLSRVLE 198
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 554 SISIIYLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
++ +Y + EY L I G +K AA IAI G+ FL + G+ +
Sbjct: 92 TMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI--GLFFLQS---KGIIYRD 146
Query: 613 LKITDVLLDENFHVKINSYNL 633
LK+ +V+LD H+KI + +
Sbjct: 147 LKLDNVMLDSEGHIKIADFGM 167
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 78/193 (40%), Gaps = 28/193 (14%)
Query: 464 LPAYRTF----TLDELKEATDCF----DSSSFMCDASHGQIYKGKLTDGTL--------- 506
LP RTF T ++ + F D+++ D G G++ G L
Sbjct: 16 LPGLRTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 507 VAIRSLKMSKKSSPHM-YTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYA 565
VAI++LK+ + ++ + H N++ G + P + ++ EY
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV---TKSKP----VMIVTEYM 128
Query: 566 PNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH 625
N +L SF+ + T +Q + I G+++L G +L ++L++ N
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLV 185
Query: 626 VKINSYNLPLLAE 638
K++ + L + E
Sbjct: 186 CKVSDFGLGRVLE 198
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 75/193 (38%), Gaps = 28/193 (14%)
Query: 464 LPAYRTFT--------LDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTL--------- 506
LP RTF + E D+++ D G G++ G L
Sbjct: 16 LPGLRTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 507 VAIRSLKMSKKSSPHM-YTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYA 565
VAI++LK+ + ++ + H N++ G + P + ++ EY
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV---TKSKP----VMIVTEYM 128
Query: 566 PNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH 625
N +L SF+ + T +Q + I G+++L G +L ++L++ N
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLV 185
Query: 626 VKINSYNLPLLAE 638
K++ + L + E
Sbjct: 186 CKVSDFGLSRVLE 198
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y+G +L VA+++LK + ++ +++H NLV LG C +
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---T 80
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLHT 602
+ P Y+I E+ L ++ + L +I++A+ ++ F+H
Sbjct: 81 REPP----FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH- 135
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLAR 659
+L + L+ EN VK+ + L L+ A P K T+ LA
Sbjct: 136 --------RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY 187
Query: 660 TEQDDKSDVY 669
+ KSDV+
Sbjct: 188 NKFSIKSDVW 197
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 491 ASHGQIYKGK-LTDGTLVAIRSLKMS--KKSSPHMYTYHIELISKLRHSNLVSALGHC-L 546
+ G+++K + G VA++ + M K+ P I+++ L+H N+V+ + C
Sbjct: 29 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 88
Query: 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVP 606
S + + IYL+F++ ++ L +S K T + ++ G+ ++H
Sbjct: 89 KASPYNRCKASIYLVFDFCEHD-LAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN--- 144
Query: 607 GVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAK 652
+ ++K +VL+ + +K+ + L AR A+ S P +
Sbjct: 145 KILHRDMKAANVLITRDGVLKLADFGL-----ARAFSLAKNSQPNR 185
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 34/168 (20%)
Query: 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVS 540
CF+ S DA +++ GK+ +L+ LK ++ M I + L H ++V
Sbjct: 33 CFEIS----DADTKEVFAGKIVPKSLL----LKPHQREKMSM---EISIHRSLAHQHVVG 81
Query: 541 ALGHCLDFSLDDPSISIIYLIFEYAPNETL------RSFISGPGYKLTWVQRIAAAIAIV 594
G F +D ++++ E +L R ++ P + Q IV
Sbjct: 82 FHGF---FEDND----FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ-------IV 127
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK 642
G Q+LH V +LK+ ++ L+E+ VKI + L E G+
Sbjct: 128 LGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 172
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y+G +L VA+++LK + ++ +++H NLV LG C +
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---T 77
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLHT 602
+ P Y+I E+ L ++ + L +I++A+ ++ F+H
Sbjct: 78 REPP----FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH- 132
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLAR 659
+L + L+ EN VK+ + L L+ A P K T+ LA
Sbjct: 133 --------RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY 184
Query: 660 TEQDDKSDVY 669
+ KSDV+
Sbjct: 185 NKFSIKSDVW 194
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 102/268 (38%), Gaps = 41/268 (15%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y+G +L VA+++LK + ++ +++H NLV LG C +
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---T 84
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLHT 602
+ P Y+I E+ L ++ + L +I++A+ ++ F+H
Sbjct: 85 REPP----FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH- 139
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLAR 659
+L + L+ EN VK+ + L L+ A P K T+ LA
Sbjct: 140 --------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 660 TEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNEC 719
+ KSDV+ + DL QV +++ E
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQVY--------ELLEKDYRMER 238
Query: 720 SDESLKRMMELCLRCLSNEPKDRPSVED 747
+ +++ EL C P DRPS +
Sbjct: 239 PEGCPEKVYELMRACWQWNPSDRPSFAE 266
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 34/168 (20%)
Query: 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVS 540
CF+ S DA +++ GK+ +L+ LK ++ M I + L H ++V
Sbjct: 55 CFEIS----DADTKEVFAGKIVPKSLL----LKPHQREKMSM---EISIHRSLAHQHVVG 103
Query: 541 ALGHCLDFSLDDPSISIIYLIFEYAPNETL------RSFISGPGYKLTWVQRIAAAIAIV 594
G F +D ++++ E +L R ++ P + Q IV
Sbjct: 104 FHGF---FEDND----FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ-------IV 149
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK 642
G Q+LH V +LK+ ++ L+E+ VKI + L E G+
Sbjct: 150 LGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 194
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 491 ASHGQIYKGK-LTDGTLVAIRSLKMS--KKSSPHMYTYHIELISKLRHSNLVSALGHC-L 546
+ G+++K + G VA++ + M K+ P I+++ L+H N+V+ + C
Sbjct: 29 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 88
Query: 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVP 606
S + IYL+F++ ++ L +S K T + ++ G+ ++H
Sbjct: 89 KASPYNRCKGSIYLVFDFCEHD-LAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN--- 144
Query: 607 GVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAK 652
+ ++K +VL+ + +K+ + L AR A+ S P +
Sbjct: 145 KILHRDMKAANVLITRDGVLKLADFGL-----ARAFSLAKNSQPNR 185
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 100/269 (37%), Gaps = 37/269 (13%)
Query: 488 MCDASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCL 546
+ +G++Y+G +L VA+++LK + ++ +++H NLV LG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC- 285
Query: 547 DFSLDDPSISIIYLIFEYAP-----NETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLH 601
+P II Y E R +S L +I++A+ ++ F+H
Sbjct: 286 ---TREPPFYIITEFMTYGNLLDYLRECNRQEVSAV-VLLYMATQISSAMEYLEKKNFIH 341
Query: 602 TGIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLA 658
NL + L+ EN VK+ + L L+ A P K T+ LA
Sbjct: 342 ---------RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 392
Query: 659 RTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNE 718
+ KSDV+ + DL QV +++ E
Sbjct: 393 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQV--------YELLEKDYRME 439
Query: 719 CSDESLKRMMELCLRCLSNEPKDRPSVED 747
+ +++ EL C P DRPS +
Sbjct: 440 RPEGCPEKVYELMRACWQWNPSDRPSFAE 468
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 491 ASHGQIYKGK-LTDGTLVAIRSLKMS--KKSSPHMYTYHIELISKLRHSNLVSALGHC-L 546
+ G+++K + G VA++ + M K+ P I+++ L+H N+V+ + C
Sbjct: 28 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 87
Query: 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVP 606
S + IYL+F++ ++ L +S K T + ++ G+ ++H
Sbjct: 88 KASPYNRCKGSIYLVFDFCEHD-LAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN--- 143
Query: 607 GVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAK 652
+ ++K +VL+ + +K+ + L AR A+ S P +
Sbjct: 144 KILHRDMKAANVLITRDGVLKLADFGL-----ARAFSLAKNSQPNR 184
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 63/132 (47%), Gaps = 20/132 (15%)
Query: 478 ATDCFDSSSFMCDASHGQIYKG--KLTDGTLVAIRSLKMS--KKSSPHMYTYHIELISKL 533
+ D + + + + ++G++YK +T+ T VAI+ +++ ++ P + L+ +L
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNET-VAIKRIRLEHEEEGVPGTAIREVSLLKEL 90
Query: 534 RHSNLV---SALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAA 590
+H N++ S + H ++LIFEYA N+ + P + ++ +
Sbjct: 91 QHRNIIELKSVIHHN----------HRLHLIFEYAENDLKKYMDKNPDVSMRVIK--SFL 138
Query: 591 IAIVKGVQFLHT 602
++ GV F H+
Sbjct: 139 YQLINGVNFCHS 150
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 34/168 (20%)
Query: 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVS 540
CF+ S DA +++ GK+ +L+ LK ++ M I + L H ++V
Sbjct: 37 CFEIS----DADTKEVFAGKIVPKSLL----LKPHQREKMSM---EISIHRSLAHQHVVG 85
Query: 541 ALGHCLDFSLDDPSISIIYLIFEYAPNETL------RSFISGPGYKLTWVQRIAAAIAIV 594
G F +D ++++ E +L R ++ P + Q IV
Sbjct: 86 FHGF---FEDND----FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ-------IV 131
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK 642
G Q+LH V +LK+ ++ L+E+ VKI + L E G+
Sbjct: 132 LGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 176
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 34/168 (20%)
Query: 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVS 540
CF+ S DA +++ GK+ +L+ LK ++ M I + L H ++V
Sbjct: 31 CFEIS----DADTKEVFAGKIVPKSLL----LKPHQREKMSM---EISIHRSLAHQHVVG 79
Query: 541 ALGHCLDFSLDDPSISIIYLIFEYAPNETL------RSFISGPGYKLTWVQRIAAAIAIV 594
G F +D ++++ E +L R ++ P + Q IV
Sbjct: 80 FHGF---FEDND----FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ-------IV 125
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK 642
G Q+LH V +LK+ ++ L+E+ VKI + L E G+
Sbjct: 126 LGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 34/168 (20%)
Query: 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVS 540
CF+ S DA +++ GK+ +L+ LK ++ M I + L H ++V
Sbjct: 57 CFEIS----DADTKEVFAGKIVPKSLL----LKPHQREKMSM---EISIHRSLAHQHVVG 105
Query: 541 ALGHCLDFSLDDPSISIIYLIFEYAPNETL------RSFISGPGYKLTWVQRIAAAIAIV 594
G F +D ++++ E +L R ++ P + Q IV
Sbjct: 106 FHGF---FEDND----FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ-------IV 151
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK 642
G Q+LH V +LK+ ++ L+E+ VKI + L E G+
Sbjct: 152 LGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 34/168 (20%)
Query: 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVS 540
CF+ S DA +++ GK+ +L+ LK ++ M I + L H ++V
Sbjct: 33 CFEIS----DADTKEVFAGKIVPKSLL----LKPHQREKMSM---EISIHRSLAHQHVVG 81
Query: 541 ALGHCLDFSLDDPSISIIYLIFEYAPNETL------RSFISGPGYKLTWVQRIAAAIAIV 594
G F +D ++++ E +L R ++ P + Q IV
Sbjct: 82 FHGF---FEDND----FVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ-------IV 127
Query: 595 KGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK 642
G Q+LH V +LK+ ++ L+E+ VKI + L E G+
Sbjct: 128 LGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 172
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 491 ASHGQIYKGK-LTDGTLVAIRSLKMS--KKSSPHMYTYHIELISKLRHSNLVSALGHC-L 546
+ G+++K + G VA++ + M K+ P I+++ L+H N+V+ + C
Sbjct: 29 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 88
Query: 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVP 606
S + IYL+F++ ++ L +S K T + ++ G+ ++H
Sbjct: 89 KASPYNRCKGSIYLVFDFCEHD-LAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN--- 144
Query: 607 GVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAK 652
+ ++K +VL+ + +K+ + L AR A+ S P +
Sbjct: 145 KILHRDMKAANVLITRDGVLKLADFGL-----ARAFSLAKNSQPNR 185
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 103/271 (38%), Gaps = 41/271 (15%)
Query: 488 MCDASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCL 546
+ +G++Y+G +L VA+++LK + ++ +++H NLV LG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC- 282
Query: 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQF 599
+ + P Y+I E+ L ++ + L +I++A+ ++ F
Sbjct: 283 --TREPP----FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 336
Query: 600 LHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--V 656
+H NL + L+ EN VK+ + L L+ A P K T+
Sbjct: 337 IH---------RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 387
Query: 657 LARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716
LA + KSDV+ + DL QV +++
Sbjct: 388 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQV--------YELLEKDYR 434
Query: 717 NECSDESLKRMMELCLRCLSNEPKDRPSVED 747
E + +++ EL C P DRPS +
Sbjct: 435 MERPEGCPEKVYELMRACWQWNPSDRPSFAE 465
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y+G +L VA+++LK + ++ +++H NLV LG C +
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---T 79
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLHT 602
+ P Y+I E+ L ++ + L +I++A+ ++ F+H
Sbjct: 80 REPP----FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH- 134
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLAR 659
+L + L+ EN VK+ + L L+ A P K T+ LA
Sbjct: 135 --------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 660 TEQDDKSDVY 669
+ KSDV+
Sbjct: 187 NKFSIKSDVW 196
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 102/268 (38%), Gaps = 41/268 (15%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y+G +L VA+++LK + ++ +++H NLV LG C +
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---T 84
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLHT 602
+ P Y+I E+ L ++ + L +I++A+ ++ F+H
Sbjct: 85 REPP----FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH- 139
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLAR 659
+L + L+ EN VK+ + L L+ A P K T+ LA
Sbjct: 140 --------RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAY 191
Query: 660 TEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNEC 719
+ KSDV+ + DL QV +++ E
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQVY--------ELLEKDYRMER 238
Query: 720 SDESLKRMMELCLRCLSNEPKDRPSVED 747
+ +++ EL C P DRPS +
Sbjct: 239 PEGCPEKVYELMRACWQWNPSDRPSFAE 266
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 78/193 (40%), Gaps = 28/193 (14%)
Query: 464 LPAYRTF----TLDELKEATDCF----DSSSFMCDASHGQIYKGKLTDGTL--------- 506
LP RT+ T ++ + F D+++ D G G++ G L
Sbjct: 16 LPGLRTYVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 507 VAIRSLKMSKKSSPHM-YTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYA 565
VAI++LK+ + ++ + H N++ G + P + ++ EY
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV---TKSKP----VMIVTEYM 128
Query: 566 PNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH 625
N +L SF+ + T +Q + I G+++L G +L ++L++ N
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLV 185
Query: 626 VKINSYNLPLLAE 638
K++ + L + E
Sbjct: 186 CKVSDFGLSRVLE 198
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 7/112 (6%)
Query: 206 GLQSLRVVSLSANHLSGE-IPD----LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLR 260
GL SL V+ ++ N +PD LRNL L + Q P + L +
Sbjct: 148 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMS 207
Query: 261 NNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLP-SITYLDIHGN 311
+N F F L+ + N LQ LD SLN + L P S+ +L++ N
Sbjct: 208 HNNF-FSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN 258
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 13/133 (9%)
Query: 210 LRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYF-------GPRFPRLHKKMVTLVLRNN 262
L+ + L+A HL G ++ L L+ + N+F FP L L +R N
Sbjct: 277 LQELDLTATHLKGLPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSL----THLYIRGN 332
Query: 263 RFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLL--SLPSITYLDIHGNKLTGLLLQN 320
+ L L LQ LD+S N SL +L + L++ N+ GL Q
Sbjct: 333 VKKLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQA 392
Query: 321 MSCNPQLAFVDLS 333
PQL +DL+
Sbjct: 393 FKECPQLELLDLA 405
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 103/271 (38%), Gaps = 41/271 (15%)
Query: 488 MCDASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCL 546
+ +G++Y+G +L VA+++LK + ++ +++H NLV LG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC- 324
Query: 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQF 599
+ + P Y+I E+ L ++ + L +I++A+ ++ F
Sbjct: 325 --TREPP----FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 378
Query: 600 LHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--V 656
+H NL + L+ EN VK+ + L L+ A P K T+
Sbjct: 379 IH---------RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 429
Query: 657 LARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716
LA + KSDV+ + DL QV +++
Sbjct: 430 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQV--------YELLEKDYR 476
Query: 717 NECSDESLKRMMELCLRCLSNEPKDRPSVED 747
E + +++ EL C P DRPS +
Sbjct: 477 MERPEGCPEKVYELMRACWQWNPSDRPSFAE 507
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 102/268 (38%), Gaps = 41/268 (15%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y+G +L VA+++LK + ++ +++H NLV LG C +
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---T 79
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLHT 602
+ P Y+I E+ L ++ + L +I++A+ ++ F+H
Sbjct: 80 REPP----FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH- 134
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLAR 659
+L + L+ EN VK+ + L L+ A P K T+ LA
Sbjct: 135 --------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 660 TEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNEC 719
+ KSDV+ + DL QV +++ E
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQVY--------ELLEKDYRMER 233
Query: 720 SDESLKRMMELCLRCLSNEPKDRPSVED 747
+ +++ EL C P DRPS +
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAE 261
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITD 617
+YLI EYA + ++ G ++ + + IV VQ+ H + +LK +
Sbjct: 89 LYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAEN 144
Query: 618 VLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDV 668
+LLD + ++KI + GK A +P L + ++ D +V
Sbjct: 145 LLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEV 195
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y+G +L VA+++LK + ++ +++H NLV LG C +
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---T 79
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLHT 602
+ P Y+I E+ L ++ + L +I++A+ ++ F+H
Sbjct: 80 REPP----FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH- 134
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLAR 659
+L + L+ EN VK+ + L L+ A P K T+ LA
Sbjct: 135 --------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 660 TEQDDKSDVY 669
+ KSDV+
Sbjct: 187 NKFSIKSDVW 196
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 102/268 (38%), Gaps = 41/268 (15%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y+G +L VA+++LK + ++ +++H NLV LG C +
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---T 79
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLHT 602
+ P Y+I E+ L ++ + L +I++A+ ++ F+H
Sbjct: 80 REPP----FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH- 134
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLAR 659
+L + L+ EN VK+ + L L+ A P K T+ LA
Sbjct: 135 --------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 660 TEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNEC 719
+ KSDV+ + DL QV +++ E
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQVY--------ELLEKDYRMER 233
Query: 720 SDESLKRMMELCLRCLSNEPKDRPSVED 747
+ +++ EL C P DRPS +
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAE 261
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 73/179 (40%), Gaps = 14/179 (7%)
Query: 494 GQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553
G ++ G + VAI++++ S + E++ KL H LV G CL+ P
Sbjct: 22 GLVHLGYWLNKDKVAIKTIREGAMSEED-FIEEAEVMMKLSHPKLVQLYGVCLE---QAP 77
Query: 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNL 613
I L+ E+ + L ++ + + + +G+ +L V +L
Sbjct: 78 ----ICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 130
Query: 614 KITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLARTEQDDKSDVY 669
+ L+ EN +K++ + + + + + S P K S V + + KSDV+
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 189
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 75/193 (38%), Gaps = 28/193 (14%)
Query: 464 LPAYRTFT--------LDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTL--------- 506
LP RT+ + E D+++ D G G++ G L
Sbjct: 14 LPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 73
Query: 507 VAIRSLKMSKKSSPHM-YTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYA 565
VAI++LK+ + ++ + H N++ G + P + ++ EY
Sbjct: 74 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV---TKSKP----VMIVTEYM 126
Query: 566 PNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH 625
N +L SF+ + T +Q + I G+++L G +L ++L++ N
Sbjct: 127 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLV 183
Query: 626 VKINSYNLPLLAE 638
K++ + L + E
Sbjct: 184 CKVSDFGLSRVLE 196
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 102/268 (38%), Gaps = 41/268 (15%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y+G +L VA+++LK + ++ +++H NLV LG C +
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---T 84
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLHT 602
+ P Y+I E+ L ++ + L +I++A+ ++ F+H
Sbjct: 85 REPP----FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH- 139
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLAR 659
+L + L+ EN VK+ + L L+ A P K T+ LA
Sbjct: 140 --------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 660 TEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNEC 719
+ KSDV+ + DL QV +++ E
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQVY--------ELLEKDYRMER 238
Query: 720 SDESLKRMMELCLRCLSNEPKDRPSVED 747
+ +++ EL C P DRPS +
Sbjct: 239 PEGCPEKVYELMRACWQWNPSDRPSFAE 266
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 102/268 (38%), Gaps = 41/268 (15%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y+G +L VA+++LK + ++ +++H NLV LG C +
Sbjct: 28 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---T 83
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLHT 602
+ P Y+I E+ L ++ + L +I++A+ ++ F+H
Sbjct: 84 REPP----FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH- 138
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLAR 659
+L + L+ EN VK+ + L L+ A P K T+ LA
Sbjct: 139 --------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 190
Query: 660 TEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNEC 719
+ KSDV+ + DL QV +++ E
Sbjct: 191 NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQVY--------ELLEKDYRMER 237
Query: 720 SDESLKRMMELCLRCLSNEPKDRPSVED 747
+ +++ EL C P DRPS +
Sbjct: 238 PEGCPEKVYELMRACWQWNPSDRPSFAE 265
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 24/188 (12%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y+G +L VA+++LK + ++ +++H NLV LG C
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---- 76
Query: 550 LDDPSISIIYLIFEYAP-----NETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI 604
+P II Y E R +S L +I++A+ ++ F+H
Sbjct: 77 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAV-VLLYMATQISSAMEYLEKKNFIH--- 132
Query: 605 VPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLARTE 661
+L + L+ EN VK+ + L L+ A P K T+ LA +
Sbjct: 133 ------RDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNK 186
Query: 662 QDDKSDVY 669
KSDV+
Sbjct: 187 FSIKSDVW 194
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 501 LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD------PS 554
L D VA++ L+ P Y + R + +AL H ++ D P+
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFY------LRFRREAQNAAALNHPAIVAVYDTGEAETPA 87
Query: 555 ISIIYLIFEYAPNETLRSFI--SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
+ Y++ EY TLR + GP ++ IA A + + F H G+ +
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA---CQALNFSHQN---GIIHRD 141
Query: 613 LKITDVLLDENFHVKINSYNLPLLAEARGK---------GSAEVSSP--AKKTSVLARTE 661
+K ++L+ VK+ + + G G+A+ SP A+ SV
Sbjct: 142 VKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSV----- 196
Query: 662 QDDKSDVY 669
D +SDVY
Sbjct: 197 -DARSDVY 203
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 75/193 (38%), Gaps = 28/193 (14%)
Query: 464 LPAYRTFT--------LDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTL--------- 506
LP RT+ + E D+++ D G G++ G L
Sbjct: 16 LPGLRTYVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEIS 75
Query: 507 VAIRSLKMSKKSSPHM-YTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIFEYA 565
VAI++LK+ + ++ + H N++ G + P + ++ EY
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV---TKSKP----VMIVTEYM 128
Query: 566 PNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH 625
N +L SF+ + T +Q + I G+++L G +L ++L++ N
Sbjct: 129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLV 185
Query: 626 VKINSYNLPLLAE 638
K++ + L + E
Sbjct: 186 CKVSDFGLSRVLE 198
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y+G +L VA+++LK + ++ +++H NLV LG C +
Sbjct: 37 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---T 92
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLHT 602
+ P Y+I E+ L ++ + L +I++A+ ++ F+H
Sbjct: 93 REPP----FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH- 147
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLAR 659
+L + L+ EN VK+ + L L+ A P K T+ LA
Sbjct: 148 --------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 199
Query: 660 TEQDDKSDVY 669
+ KSDV+
Sbjct: 200 NKFSIKSDVW 209
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 24/188 (12%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y+G +L VA+++LK + ++ +++H NLV LG C
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---- 78
Query: 550 LDDPSISIIYLIFEYAP-----NETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI 604
+P II Y E R +S L +I++A+ ++ F+H
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAV-VLLYMATQISSAMEYLEKKNFIH--- 134
Query: 605 VPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLARTE 661
+L + L+ EN VK+ + L L+ A P K T+ LA +
Sbjct: 135 ------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 662 QDDKSDVY 669
KSDV+
Sbjct: 189 FSIKSDVW 196
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 24/188 (12%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y+G +L VA+++LK + ++ +++H NLV LG C
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---- 83
Query: 550 LDDPSISIIYLIFEYAP-----NETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI 604
+P II Y E R +S L +I++A+ ++ F+H
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAV-VLLYMATQISSAMEYLEKKNFIH--- 139
Query: 605 VPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLARTE 661
+L + L+ EN VK+ + L L+ A P K T+ LA +
Sbjct: 140 ------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 662 QDDKSDVY 669
KSDV+
Sbjct: 194 FSIKSDVW 201
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/132 (18%), Positives = 58/132 (43%), Gaps = 12/132 (9%)
Query: 502 TDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLI 561
+ G LVA++ + + K+ + + ++ +H N+V L + D ++++
Sbjct: 174 SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL---VGDE----LWVV 226
Query: 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD 621
E+ L ++ ++ Q A +A+++ + LH GV ++K +LL
Sbjct: 227 MEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLT 281
Query: 622 ENFHVKINSYNL 633
+ VK++ +
Sbjct: 282 HDGRVKLSDFGF 293
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 24/188 (12%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y+G +L VA+++LK + ++ +++H NLV LG C
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---- 78
Query: 550 LDDPSISIIYLIFEYAP-----NETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI 604
+P II Y E R +S L +I++A+ ++ F+H
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAV-VLLYMATQISSAMEYLEKKNFIH--- 134
Query: 605 VPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLARTE 661
+L + L+ EN VK+ + L L+ A P K T+ LA +
Sbjct: 135 ------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 662 QDDKSDVY 669
KSDV+
Sbjct: 189 FSIKSDVW 196
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y+G +L VA+++LK + ++ +++H NLV LG C +
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---T 80
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLHT 602
+ P Y+I E+ L ++ + L +I++A+ ++ F+H
Sbjct: 81 REPP----FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH- 135
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLAR 659
+L + L+ EN VK+ + L L+ A P K T+ LA
Sbjct: 136 --------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAY 187
Query: 660 TEQDDKSDVY 669
+ KSDV+
Sbjct: 188 NKFSIKSDVW 197
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITD 617
+ ++ EY N +L SF+ + T +Q + I G+++L G +L +
Sbjct: 92 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARN 148
Query: 618 VLLDENFHVKINSYNLPLLAE 638
+L++ N K++ + L + E
Sbjct: 149 ILINSNLVCKVSDFGLSRVLE 169
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/132 (18%), Positives = 58/132 (43%), Gaps = 12/132 (9%)
Query: 502 TDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLI 561
+ G LVA++ + + K+ + + ++ +H N+V L + D ++++
Sbjct: 52 SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL---VGDE----LWVV 104
Query: 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD 621
E+ L ++ ++ Q A +A+++ + LH GV ++K +LL
Sbjct: 105 MEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLT 159
Query: 622 ENFHVKINSYNL 633
+ VK++ +
Sbjct: 160 HDGRVKLSDFGF 171
>pdb|4ECN|A Chain A, Crystal Structure Of A Leucine-Rich Repeat Protein
(Bt_0210) From Bacteroides Thetaiotaomicron Vpi-5482 At
2.80 A Resolution
Length = 876
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 268 LNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQL 327
LN +L+++ + D NR + + + + PS+ L I N + + + PQL
Sbjct: 773 LNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIRKV---DEKLTPQL 829
Query: 328 AFVDLSS--NLLTGYLPSCLQVEAKTRLVLYSK 358
+D++ N+ C +EA ++LY K
Sbjct: 830 YILDIADNPNISIDVTSVCPYIEAGXYVLLYDK 862
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITD 617
+ ++ EY N +L SF+ + T +Q + I G+++L G +L +
Sbjct: 109 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARN 165
Query: 618 VLLDENFHVKINSYNLPLLAE 638
+L++ N K++ + L + E
Sbjct: 166 ILINSNLVCKVSDFGLSRVLE 186
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/132 (18%), Positives = 58/132 (43%), Gaps = 12/132 (9%)
Query: 502 TDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLI 561
+ G LVA++ + + K+ + + ++ +H N+V L + D ++++
Sbjct: 54 SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL---VGDE----LWVV 106
Query: 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD 621
E+ L ++ ++ Q A +A+++ + LH GV ++K +LL
Sbjct: 107 MEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLT 161
Query: 622 ENFHVKINSYNL 633
+ VK++ +
Sbjct: 162 HDGRVKLSDFGF 173
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/132 (18%), Positives = 58/132 (43%), Gaps = 12/132 (9%)
Query: 502 TDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLI 561
+ G LVA++ + + K+ + + ++ +H N+V L + D ++++
Sbjct: 97 SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL---VGDE----LWVV 149
Query: 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD 621
E+ L ++ ++ Q A +A+++ + LH GV ++K +LL
Sbjct: 150 MEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLT 204
Query: 622 ENFHVKINSYNL 633
+ VK++ +
Sbjct: 205 HDGRVKLSDFGF 216
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 501 LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD------PS 554
L D VA++ L+ P Y + R + +AL H ++ D P+
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFY------LRFRREAQNAAALNHPAIVAVYDTGEAETPA 87
Query: 555 ISIIYLIFEYAPNETLRSFI--SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
+ Y++ EY TLR + GP ++ IA A + + F H G+ +
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA---CQALNFSHQN---GIIHRD 141
Query: 613 LKITDVLLDENFHVKINSYNLPLLAEARGK---------GSAEVSSP--AKKTSVLARTE 661
+K ++++ VK+ + + G G+A+ SP A+ SV
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV----- 196
Query: 662 QDDKSDVY 669
D +SDVY
Sbjct: 197 -DARSDVY 203
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 501 LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD------PS 554
L D VA++ L+ P Y + R + +AL H ++ D P+
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFY------LRFRREAQNAAALNHPAIVAVYDTGEAETPA 87
Query: 555 ISIIYLIFEYAPNETLRSFI--SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612
+ Y++ EY TLR + GP ++ IA A + + F H G+ +
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA---CQALNFSHQN---GIIHRD 141
Query: 613 LKITDVLLDENFHVKINSYNLPLLAEARGK---------GSAEVSSP--AKKTSVLARTE 661
+K ++++ VK+ + + G G+A+ SP A+ SV
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV----- 196
Query: 662 QDDKSDVY 669
D +SDVY
Sbjct: 197 -DARSDVY 203
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y+G +L VA+++LK + ++ +++H NLV LG C +
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---T 84
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLHT 602
+ P Y+I E+ L ++ + L +I++A+ ++ F+H
Sbjct: 85 REPP----FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH- 139
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLAR 659
+L + L+ EN VK+ + L L+ A P K T+ LA
Sbjct: 140 --------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 191
Query: 660 TEQDDKSDVY 669
+ KSDV+
Sbjct: 192 NKFSIKSDVW 201
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 24/185 (12%)
Query: 494 GQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552
G++Y+G +L VA+++LK + ++ +++H NLV LG C +
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC----TRE 79
Query: 553 PSISIIYLIFEYAP-----NETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG 607
P II Y E R +S L +I++A+ ++ F+H
Sbjct: 80 PPFYIITEFMTYGNLLDYLRECNRQEVSAV-VLLYMATQISSAMEYLEKKNFIH------ 132
Query: 608 VFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLARTEQDD 664
+L + L+ EN VK+ + L L+ A P K T+ LA +
Sbjct: 133 ---RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 665 KSDVY 669
KSDV+
Sbjct: 190 KSDVW 194
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y+G +L VA+++LK + ++ +++H NLV LG C +
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---T 81
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLHT 602
+ P Y+I E+ L ++ + L +I++A+ ++ F+H
Sbjct: 82 REPP----FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH- 136
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLAR 659
+L + L+ EN VK+ + L L+ A P K T+ LA
Sbjct: 137 --------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 188
Query: 660 TEQDDKSDVY 669
+ KSDV+
Sbjct: 189 NKFSIKSDVW 198
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y+G +L VA+++LK + ++ +++H NLV LG C +
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---T 81
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLHT 602
+ P Y+I E+ L ++ + L +I++A+ ++ F+H
Sbjct: 82 REPP----FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH- 136
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLAR 659
+L + L+ EN VK+ + L L+ A P K T+ LA
Sbjct: 137 --------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAY 188
Query: 660 TEQDDKSDVY 669
+ KSDV+
Sbjct: 189 NKFSIKSDVW 198
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/132 (18%), Positives = 58/132 (43%), Gaps = 12/132 (9%)
Query: 502 TDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLI 561
+ G LVA++ + + K+ + + ++ +H N+V L + D ++++
Sbjct: 43 SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL---VGDE----LWVV 95
Query: 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD 621
E+ L ++ ++ Q A +A+++ + LH GV ++K +LL
Sbjct: 96 MEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLT 150
Query: 622 ENFHVKINSYNL 633
+ VK++ +
Sbjct: 151 HDGRVKLSDFGF 162
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 491 ASHGQIYKGKLTDGTL-VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549
+G++Y+G +L VA+++LK + ++ +++H NLV LG C +
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVC---T 81
Query: 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYK-------LTWVQRIAAAIAIVKGVQFLHT 602
+ P Y+I E+ L ++ + L +I++A+ ++ F+H
Sbjct: 82 REPP----FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH- 136
Query: 603 GIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSPAKKTS--VLAR 659
+L + L+ EN VK+ + L L+ A P K T+ LA
Sbjct: 137 --------RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 188
Query: 660 TEQDDKSDVY 669
+ KSDV+
Sbjct: 189 NKFSIKSDVW 198
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 488 MCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVS 540
+ + ++G +YK + G A++ +++ K+ P I ++ +L+HSN+V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVK 64
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 488 MCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVS 540
+ + ++G +YK + G A++ +++ K+ P I ++ +L+HSN+V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVK 64
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 488 MCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVS 540
+ + ++G +YK + G A++ +++ K+ P I ++ +L+HSN+V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVK 64
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/132 (18%), Positives = 58/132 (43%), Gaps = 12/132 (9%)
Query: 502 TDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLI 561
+ G LVA++ + + K+ + + ++ +H N+V L + D ++++
Sbjct: 47 SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL---VGDE----LWVV 99
Query: 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD 621
E+ L ++ ++ Q A +A+++ + LH GV ++K +LL
Sbjct: 100 MEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLT 154
Query: 622 ENFHVKINSYNL 633
+ VK++ +
Sbjct: 155 HDGRVKLSDFGF 166
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 593 IVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSP- 650
I+KG+ +LH+ ++K +VLL E+ VK+ + + L + + K + V +P
Sbjct: 113 ILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF 169
Query: 651 AKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNIGTDEARKSI 710
V+ ++ D K+D++ SE + V L+ N
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN---------- 219
Query: 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
+P + + LK +E CL+ EP RP+ ++ L
Sbjct: 220 -NPPTLEGNYSKPLKEFVE---ACLNKEPSFRPTAKELL 254
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 203 SLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHK--KMVTLVLR 260
+L+GL SL+ +S S+N ++ P L NL L D+ N L K + +L+
Sbjct: 146 ALSGLTSLQQLSFSSNQVTDLKP-LANLTTLERLDISSNKVS-DISVLAKLTNLESLIAT 203
Query: 261 NNRFQFGLNPDELRSYNQLQKLD-ISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGL 316
NN+ ++ L LD +SLN I +L SL ++T LD+ N+++ L
Sbjct: 204 NNQIS------DITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNL 254
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 593 IVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSP- 650
I+KG+ +LH+ ++K +VLL E+ VK+ + + L + + K + V +P
Sbjct: 133 ILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF 189
Query: 651 AKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNIGTDEARKSI 710
V+ ++ D K+D++ SE + V L+ N
Sbjct: 190 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN---------- 239
Query: 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
+P + + LK +E CL+ EP RP+ ++ L
Sbjct: 240 -NPPTLEGNYSKPLKEFVE---ACLNKEPSFRPTAKELL 274
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 4/111 (3%)
Query: 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITD 617
+YLI EYA + ++ G ++ + + IV VQ+ H + +LK +
Sbjct: 86 LYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAEN 141
Query: 618 VLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDV 668
+LLD + ++KI + GK SP L + ++ D +V
Sbjct: 142 LLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEV 192
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Query: 204 LTGLQSLRVVSLSANHLSGE-IPD----LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLV 258
GL SL V+ ++ N +PD LRNL L + Q P + L
Sbjct: 465 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524
Query: 259 LRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLP-SITYLDIHGN 311
+ +N F F L+ + N LQ LD SLN + L P S+ +L++ N
Sbjct: 525 MSHNNF-FSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN 577
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 29.6 bits (65), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 203 SLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHK--KMVTLVLR 260
+L+GL SL+ +S S+N ++ P L NL L D+ N L K + +L+
Sbjct: 146 ALSGLTSLQQLSFSSNQVTDLKP-LANLTTLERLDISSNKVS-DISVLAKLTNLESLIAT 203
Query: 261 NNRFQFGLNPDELRSYNQLQKLD-ISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGL 316
NN+ ++ L LD +SLN I +L SL ++T LD+ N+++ L
Sbjct: 204 NNQIS------DITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNL 254
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 593 IVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSP- 650
I+KG+ +LH+ ++K +VLL E+ VK+ + + L + + K + V +P
Sbjct: 113 ILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF 169
Query: 651 AKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNIGTDEARKSI 710
V+ ++ D K+D++ SE + V L+ N
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN---------- 219
Query: 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
+P + + LK +E CL+ EP RP+ ++ L
Sbjct: 220 -NPPTLEGNYSKPLKEFVE---ACLNKEPSFRPTAKELL 254
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 7/114 (6%)
Query: 204 LTGLQSLRVVSLSANHLSGE-IPD----LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLV 258
GL SL V+ ++ N +PD LRNL L + Q P + L
Sbjct: 441 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 500
Query: 259 LRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLP-SITYLDIHGN 311
+ +N F F L+ + N LQ LD SLN + L P S+ +L++ N
Sbjct: 501 MSHNNF-FSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN 553
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 72/182 (39%), Gaps = 37/182 (20%)
Query: 507 VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD------PSISIIYL 560
VA++ L+ P Y + R + +AL H ++ D P+ + Y+
Sbjct: 40 VAVKVLRADLARDPSFY------LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 561 IFEYAPNETLRSFI--SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDV 618
+ EY TLR + GP ++ IA A + + F H G+ ++K ++
Sbjct: 94 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA---CQALNFSHQN---GIIHRDVKPANI 147
Query: 619 LLDENFHVKINSYNLPLLAEARGK---------GSAEVSSP--AKKTSVLARTEQDDKSD 667
++ VK+ + + G G+A+ SP A+ SV D +SD
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV------DARSD 201
Query: 668 VY 669
VY
Sbjct: 202 VY 203
>pdb|4FCG|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of The Type
Iii Effector Xcv3220 (Xopl)
Length = 328
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 13/107 (12%)
Query: 203 SLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNN 262
L LQSLR+ L I +L+NLK+L++ + + GP L K+ L LR
Sbjct: 181 GLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSALGPAIHHL-PKLEELDLRGC 239
Query: 263 RFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIH 309
LR+Y + L R + +LL+LP LDIH
Sbjct: 240 --------TALRNYPPIFGGRAPLKRLILKDCSNLLTLP----LDIH 274
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 72/182 (39%), Gaps = 37/182 (20%)
Query: 507 VAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD------PSISIIYL 560
VA++ L+ P Y + R + +AL H ++ D P+ + Y+
Sbjct: 57 VAVKVLRADLARDPSFY------LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 110
Query: 561 IFEYAPNETLRSFI--SGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDV 618
+ EY TLR + GP ++ IA A + + F H G+ ++K ++
Sbjct: 111 VMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA---CQALNFSHQN---GIIHRDVKPANI 164
Query: 619 LLDENFHVKINSYNLPLLAEARGK---------GSAEVSSP--AKKTSVLARTEQDDKSD 667
++ VK+ + + G G+A+ SP A+ SV D +SD
Sbjct: 165 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV------DARSD 218
Query: 668 VY 669
VY
Sbjct: 219 VY 220
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 19/159 (11%)
Query: 593 IVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP-LLAEARGKGSAEVSSP- 650
I+KG+ +LH+ ++K +VLL E+ VK+ + + L + + K + V +P
Sbjct: 128 ILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF 184
Query: 651 AKKTSVLARTEQDDKSDVYDXXXXXXXXXXXXXXTSENVVVLVKDLLQVNIGTDEARKSI 710
V+ ++ D K+D++ SE + V L+ N
Sbjct: 185 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN---------- 234
Query: 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTL 749
+P + + LK +E CL+ EP RP+ ++ L
Sbjct: 235 -NPPTLEGNYSKPLKEFVE---ACLNKEPSFRPTAKELL 269
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,571,777
Number of Sequences: 62578
Number of extensions: 583358
Number of successful extensions: 1795
Number of sequences better than 100.0: 303
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 270
Number of HSP's that attempted gapping in prelim test: 1548
Number of HSP's gapped (non-prelim): 420
length of query: 769
length of database: 14,973,337
effective HSP length: 106
effective length of query: 663
effective length of database: 8,340,069
effective search space: 5529465747
effective search space used: 5529465747
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)