Query 004195
Match_columns 769
No_of_seqs 771 out of 5422
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 17:16:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004195.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004195hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 1.3E-52 4.6E-57 439.0 18.0 254 480-757 13-289 (299)
2 4aoj_A High affinity nerve gro 100.0 2.5E-52 8.6E-57 443.0 20.1 256 480-759 41-321 (329)
3 4fih_A Serine/threonine-protei 100.0 1.4E-52 4.8E-57 444.0 17.4 255 480-758 74-331 (346)
4 4gt4_A Tyrosine-protein kinase 100.0 6.4E-52 2.2E-56 435.7 19.8 249 482-754 28-303 (308)
5 3fpq_A Serine/threonine-protei 100.0 4.1E-52 1.4E-56 432.0 18.0 256 483-757 29-289 (290)
6 3omv_A RAF proto-oncogene seri 100.0 1.2E-51 4E-56 431.7 21.0 255 480-757 36-300 (307)
7 4b9d_A Serine/threonine-protei 100.0 3E-52 1E-56 442.2 16.6 255 480-759 24-285 (350)
8 4fie_A Serine/threonine-protei 100.0 3E-51 1E-55 444.5 19.0 254 480-757 151-407 (423)
9 3hyh_A Carbon catabolite-derep 100.0 7.6E-51 2.6E-55 418.7 19.5 253 480-759 13-271 (275)
10 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.3E-51 1.1E-55 427.0 14.9 250 480-756 32-296 (311)
11 4g3f_A NF-kappa-beta-inducing 100.0 2.1E-50 7.1E-55 426.2 14.7 249 480-756 58-315 (336)
12 3ubd_A Ribosomal protein S6 ki 100.0 1.1E-50 3.7E-55 423.3 10.9 251 480-756 24-287 (304)
13 3hmm_A TGF-beta receptor type- 100.0 3.2E-50 1.1E-54 423.9 12.0 275 481-762 4-302 (303)
14 4ase_A Vascular endothelial gr 100.0 5.7E-49 2E-53 420.5 16.0 257 478-757 62-347 (353)
15 4g31_A Eukaryotic translation 100.0 2.1E-48 7.2E-53 407.9 15.5 258 480-756 5-285 (299)
16 4b99_A Mitogen-activated prote 100.0 8.9E-47 3E-51 410.7 20.1 272 480-757 54-351 (398)
17 4f9c_A Cell division cycle 7-r 100.0 2E-46 6.9E-51 403.6 15.2 266 474-756 15-358 (361)
18 3v5w_A G-protein coupled recep 100.0 4.7E-46 1.6E-50 421.1 14.2 255 479-756 188-455 (689)
19 3uto_A Twitchin; kinase, muscl 100.0 3.1E-45 1E-49 418.2 16.2 256 479-756 156-416 (573)
20 3uim_A Brassinosteroid insensi 100.0 5.3E-44 1.8E-48 382.5 17.8 284 466-757 16-311 (326)
21 2qkw_B Protein kinase; three-h 100.0 6.3E-44 2.2E-48 381.1 16.3 281 469-760 28-318 (321)
22 2c30_A Serine/threonine-protei 100.0 1.2E-42 4E-47 371.0 21.0 263 469-757 24-301 (321)
23 3fxz_A Serine/threonine-protei 100.0 9.3E-43 3.2E-47 367.6 19.3 255 479-757 19-276 (297)
24 3zgw_A Maternal embryonic leuc 100.0 2.4E-42 8.2E-47 371.2 17.8 255 478-758 8-268 (347)
25 3fe3_A MAP/microtubule affinit 100.0 2.1E-42 7E-47 369.6 16.0 253 479-757 14-271 (328)
26 1tki_A Titin; serine kinase, m 100.0 2.9E-42 9.8E-47 367.8 16.9 258 479-759 4-266 (321)
27 1ogq_A PGIP-2, polygalacturona 100.0 1.4E-41 4.9E-46 361.0 22.1 293 27-363 2-306 (313)
28 2yab_A Death-associated protei 100.0 7.4E-42 2.5E-46 369.7 19.9 255 478-755 10-277 (361)
29 3niz_A Rhodanese family protei 100.0 2.7E-42 9.4E-47 366.5 15.9 268 479-757 20-307 (311)
30 1o6l_A RAC-beta serine/threoni 100.0 1.1E-41 3.9E-46 364.9 19.7 251 480-756 5-266 (337)
31 2y0a_A Death-associated protei 100.0 2.4E-41 8E-46 361.7 19.7 254 480-756 11-277 (326)
32 1ob3_A PFPK5, cell division co 100.0 1.3E-41 4.5E-46 357.2 17.2 266 480-756 2-286 (288)
33 3s95_A LIMK-1, LIM domain kina 100.0 8.2E-42 2.8E-46 362.8 15.6 255 480-756 10-281 (310)
34 2nru_A Interleukin-1 receptor- 100.0 4.7E-41 1.6E-45 356.4 21.0 277 467-756 12-305 (307)
35 2pmi_A Negative RE, cyclin-dep 100.0 4.1E-41 1.4E-45 358.5 20.2 268 479-761 4-304 (317)
36 3c0i_A Peripheral plasma membr 100.0 2.1E-41 7.1E-46 365.9 18.1 257 479-757 23-293 (351)
37 3fdn_A Serine/threonine-protei 100.0 3.1E-41 1E-45 352.7 18.1 258 479-762 8-269 (279)
38 1kob_A Twitchin; kinase, intra 100.0 2.2E-41 7.6E-46 369.3 16.9 257 479-757 50-311 (387)
39 3tki_A Serine/threonine-protei 100.0 1.2E-41 4.1E-46 363.4 14.4 255 479-758 6-269 (323)
40 3p86_A Serine/threonine-protei 100.0 7.6E-41 2.6E-45 354.8 20.5 256 478-757 35-298 (309)
41 4hcu_A Tyrosine-protein kinase 100.0 2.6E-41 8.9E-46 351.2 16.5 253 480-757 10-266 (269)
42 4aw2_A Serine/threonine-protei 100.0 1.1E-41 3.9E-46 376.5 14.5 265 471-756 65-344 (437)
43 2bdw_A Hypothetical protein K1 100.0 5E-41 1.7E-45 364.1 19.3 258 477-757 26-291 (362)
44 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.4E-41 4.7E-46 366.7 14.4 252 479-756 22-286 (353)
45 2qol_A Ephrin receptor; recept 100.0 2.6E-41 8.8E-46 367.9 16.5 254 480-757 45-309 (373)
46 2zv2_A Calcium/calmodulin-depe 100.0 5.3E-41 1.8E-45 354.4 17.9 253 480-755 13-297 (298)
47 1fot_A TPK1 delta, CAMP-depend 100.0 7.3E-41 2.5E-45 356.0 19.1 249 480-756 6-264 (318)
48 2x4f_A Myosin light chain kina 100.0 3.4E-41 1.1E-45 366.8 16.5 252 484-757 93-349 (373)
49 3ugc_A Tyrosine-protein kinase 100.0 8.5E-42 2.9E-46 360.0 11.3 269 480-756 10-290 (295)
50 3kul_A Ephrin type-A receptor 100.0 5E-41 1.7E-45 359.0 17.4 255 480-758 49-314 (325)
51 3soa_A Calcium/calmodulin-depe 100.0 5E-41 1.7E-45 372.7 18.0 257 478-757 9-274 (444)
52 3rgz_A Protein brassinosteroid 100.0 9.7E-41 3.3E-45 397.9 21.5 329 23-363 4-357 (768)
53 1xjd_A Protein kinase C, theta 100.0 2.3E-41 7.9E-46 363.5 14.1 253 478-756 15-275 (345)
54 2psq_A Fibroblast growth facto 100.0 5.5E-41 1.9E-45 365.1 17.2 255 480-758 81-365 (370)
55 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.7E-41 5.6E-46 363.3 12.8 253 480-759 9-267 (336)
56 2eue_A Carbon catabolite derep 100.0 1.8E-40 6.2E-45 346.1 20.3 253 480-759 13-271 (275)
57 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.7E-41 1.3E-45 349.8 14.9 254 479-757 7-264 (268)
58 3g33_A Cell division protein k 100.0 2E-40 6.9E-45 351.7 20.8 275 478-758 7-304 (308)
59 4dc2_A Protein kinase C IOTA t 100.0 7.2E-41 2.5E-45 365.3 17.5 255 479-756 51-324 (396)
60 1rdq_E PKA C-alpha, CAMP-depen 100.0 1E-40 3.5E-45 359.6 18.1 250 480-756 41-299 (350)
61 3o0g_A Cell division protein k 100.0 1.4E-40 4.7E-45 350.2 18.6 267 480-757 2-289 (292)
62 4fr4_A YANK1, serine/threonine 100.0 6.1E-41 2.1E-45 364.6 16.0 254 480-756 15-277 (384)
63 2w4o_A Calcium/calmodulin-depe 100.0 7.8E-41 2.7E-45 361.0 16.7 256 478-758 51-313 (349)
64 3v8s_A RHO-associated protein 100.0 4.3E-41 1.5E-45 369.1 14.7 261 472-756 61-335 (410)
65 3gen_A Tyrosine-protein kinase 100.0 9.9E-41 3.4E-45 349.5 16.5 254 479-757 23-280 (283)
66 2vd5_A DMPK protein; serine/th 100.0 2.2E-41 7.5E-46 371.6 12.0 265 470-756 51-333 (412)
67 3f3z_A Calcium/calmodulin-depe 100.0 2.2E-40 7.5E-45 345.8 18.7 260 479-761 8-272 (277)
68 3cbl_A C-FES, proto-oncogene t 100.0 2.4E-41 8.2E-46 369.2 11.6 255 479-757 113-374 (377)
69 4euu_A Serine/threonine-protei 100.0 3.6E-40 1.2E-44 351.7 20.0 270 480-757 9-309 (319)
70 3uc3_A Serine/threonine-protei 100.0 6.2E-41 2.1E-45 363.4 14.1 258 479-758 19-282 (361)
71 3is5_A Calcium-dependent prote 100.0 2E-40 6.7E-45 347.7 17.2 254 480-756 22-284 (285)
72 2y94_A 5'-AMP-activated protei 100.0 2.7E-40 9.3E-45 369.2 19.2 253 480-758 16-274 (476)
73 2a2a_A Death-associated protei 100.0 3.6E-40 1.2E-44 352.0 19.3 256 479-756 11-278 (321)
74 3poz_A Epidermal growth factor 100.0 1E-40 3.5E-45 357.1 15.0 253 480-757 15-278 (327)
75 2ac3_A MAP kinase-interacting 100.0 1.9E-40 6.5E-45 353.3 16.9 256 480-758 12-303 (316)
76 3a62_A Ribosomal protein S6 ki 100.0 2.4E-40 8.2E-45 354.1 17.7 250 480-756 17-282 (327)
77 3soc_A Activin receptor type-2 100.0 4.7E-41 1.6E-45 358.9 12.1 274 479-759 23-320 (322)
78 2i0e_A Protein kinase C-beta I 100.0 1.6E-40 5.5E-45 358.1 16.3 251 479-756 19-282 (353)
79 3p1a_A MYT1 kinase, membrane-a 100.0 3.9E-41 1.3E-45 357.6 11.3 249 480-756 57-310 (311)
80 3pg1_A Mitogen-activated prote 100.0 2E-40 6.7E-45 360.3 17.0 281 471-758 13-324 (362)
81 2vgo_A Serine/threonine-protei 100.0 2.9E-40 9.9E-45 346.2 17.7 254 480-759 14-271 (284)
82 2jam_A Calcium/calmodulin-depe 100.0 2.1E-40 7E-45 351.0 16.7 257 479-757 8-268 (304)
83 3mtl_A Cell division protein k 100.0 1E-40 3.4E-45 356.6 14.4 270 480-760 2-291 (324)
84 3l9p_A Anaplastic lymphoma kin 100.0 1.1E-40 3.6E-45 362.6 14.8 257 480-760 71-348 (367)
85 3qd2_B Eukaryotic translation 100.0 8.1E-41 2.8E-45 358.4 13.7 258 479-755 5-330 (332)
86 3a8x_A Protein kinase C IOTA t 100.0 2.7E-40 9.3E-45 355.7 17.8 251 480-756 9-281 (345)
87 3lb7_A RAF proto-oncogene seri 100.0 9.3E-40 3.2E-44 346.2 21.6 256 480-758 36-301 (307)
88 3dbq_A Dual specificity protei 100.0 1.7E-40 5.7E-45 357.9 15.9 253 480-757 9-280 (343)
89 3kk8_A Calcium/calmodulin depe 100.0 4.1E-40 1.4E-44 345.0 18.4 262 479-762 5-273 (284)
90 1t4h_A Serine/threonine-protei 100.0 4.1E-40 1.4E-44 346.2 18.2 255 482-757 28-289 (290)
91 4ejn_A RAC-alpha serine/threon 100.0 9.9E-41 3.4E-45 372.7 14.3 252 479-756 147-410 (446)
92 3ttj_A Mitogen-activated prote 100.0 5E-40 1.7E-44 367.6 19.8 269 479-756 61-361 (464)
93 4eqm_A Protein kinase; transfe 100.0 3.2E-40 1.1E-44 347.7 17.1 255 479-755 10-273 (294)
94 3cok_A Serine/threonine-protei 100.0 1.9E-40 6.6E-45 346.4 15.1 256 479-759 10-271 (278)
95 3hko_A Calcium/calmodulin-depe 100.0 3.8E-40 1.3E-44 355.5 17.5 263 475-759 21-339 (345)
96 1u5q_A Serine/threonine protei 100.0 2.6E-40 8.7E-45 356.6 16.1 250 480-757 54-312 (348)
97 3eqc_A Dual specificity mitoge 100.0 8.1E-41 2.8E-45 363.0 12.2 268 480-758 33-332 (360)
98 4agu_A Cyclin-dependent kinase 100.0 4.8E-40 1.6E-44 349.3 17.4 267 480-757 3-291 (311)
99 3dtc_A Mitogen-activated prote 100.0 3.6E-40 1.2E-44 342.9 16.1 251 480-753 7-269 (271)
100 3kn6_A Ribosomal protein S6 ki 100.0 9.5E-41 3.3E-45 356.8 11.9 251 485-757 16-277 (325)
101 3gni_B Strad alpha; kinase fol 100.0 2.4E-40 8.1E-45 363.2 15.3 270 479-758 24-341 (389)
102 3q4u_A Activin receptor type-1 100.0 2.2E-40 7.5E-45 350.1 14.0 256 479-755 7-300 (301)
103 3tt0_A Basic fibroblast growth 100.0 7.6E-40 2.6E-44 358.1 18.7 257 479-759 68-354 (382)
104 3ork_A Serine/threonine protei 100.0 4.5E-40 1.5E-44 349.5 16.4 261 479-757 11-280 (311)
105 3rp9_A Mitogen-activated prote 100.0 1.2E-39 3.9E-44 365.6 20.5 271 479-757 52-403 (458)
106 1qcf_A Haematopoetic cell kina 100.0 4.7E-40 1.6E-44 367.8 17.3 253 478-756 186-443 (454)
107 4f0f_A Serine/threonine-protei 100.0 1.3E-39 4.4E-44 341.8 19.4 250 480-753 19-285 (287)
108 3bhy_A Death-associated protei 100.0 8.5E-40 2.9E-44 342.4 17.9 259 480-760 5-275 (283)
109 3llt_A Serine/threonine kinase 100.0 2.9E-40 9.9E-45 358.6 14.6 273 470-755 25-360 (360)
110 3dls_A PAS domain-containing s 100.0 3.4E-40 1.1E-44 354.0 14.6 248 478-757 22-281 (335)
111 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.2E-40 1.4E-44 367.8 16.0 257 479-761 183-444 (452)
112 1k9a_A Carboxyl-terminal SRC k 100.0 1.2E-39 4.1E-44 364.0 19.6 251 479-756 192-444 (450)
113 3vhe_A Vascular endothelial gr 100.0 3.3E-40 1.1E-44 358.0 14.6 264 471-757 13-355 (359)
114 2zmd_A Dual specificity protei 100.0 3E-40 1E-44 361.7 14.3 251 480-757 56-327 (390)
115 1luf_A Muscle-specific tyrosin 100.0 9.1E-40 3.1E-44 352.2 17.8 257 477-757 44-335 (343)
116 2qr7_A Ribosomal protein S6 ki 100.0 2.8E-40 9.6E-45 355.2 13.6 256 478-756 20-283 (342)
117 3gbz_A Kinase, CMGC CDK; ssgci 100.0 6.8E-40 2.3E-44 351.0 16.4 269 477-757 31-325 (329)
118 1ua2_A CAK, cell division prot 100.0 1E-39 3.4E-44 352.2 17.9 270 477-757 7-298 (346)
119 3eb0_A Putative uncharacterize 100.0 5.6E-40 1.9E-44 359.3 16.0 274 476-757 3-328 (383)
120 2j7t_A Serine/threonine-protei 100.0 7.3E-40 2.5E-44 346.3 16.3 258 478-757 17-282 (302)
121 1mp8_A Focal adhesion kinase 1 100.0 7.1E-40 2.4E-44 342.7 16.0 255 479-758 14-277 (281)
122 1nxk_A MAP kinase-activated pr 100.0 8.7E-40 3E-44 359.1 17.4 255 480-757 61-328 (400)
123 3t9t_A Tyrosine-protein kinase 100.0 1.5E-39 5.1E-44 337.4 18.2 253 480-757 8-264 (267)
124 3oz6_A Mitogen-activated prote 100.0 8.7E-40 3E-44 358.5 17.2 269 477-756 6-334 (388)
125 3kex_A Receptor tyrosine-prote 100.0 5.5E-40 1.9E-44 351.1 14.9 253 480-757 13-276 (325)
126 3i6u_A CDS1, serine/threonine- 100.0 6.7E-40 2.3E-44 362.5 16.0 258 477-757 132-406 (419)
127 3qup_A Tyrosine-protein kinase 100.0 6.4E-40 2.2E-44 350.3 15.3 261 478-756 21-297 (323)
128 2r5t_A Serine/threonine-protei 100.0 7.2E-40 2.5E-44 355.5 15.7 250 480-756 38-299 (373)
129 3a7i_A MST3 kinase, serine/thr 100.0 2.6E-39 9E-44 342.3 19.4 255 479-759 21-279 (303)
130 2acx_A G protein-coupled recep 100.0 4.2E-40 1.4E-44 372.5 14.1 253 479-756 183-450 (576)
131 4aaa_A Cyclin-dependent kinase 100.0 4E-40 1.4E-44 353.2 13.3 267 480-757 25-313 (331)
132 2yex_A Serine/threonine-protei 100.0 8.7E-40 3E-44 340.9 15.2 256 479-759 6-270 (276)
133 2clq_A Mitogen-activated prote 100.0 1.6E-39 5.6E-44 342.3 17.4 256 481-758 23-286 (295)
134 2y7j_A Phosphorylase B kinase 100.0 2.8E-39 9.5E-44 351.1 19.6 259 474-755 88-364 (365)
135 1opk_A P150, C-ABL, proto-onco 100.0 5.1E-40 1.7E-44 371.1 14.2 252 479-755 219-476 (495)
136 3lxl_A Tyrosine-protein kinase 100.0 1.1E-40 3.9E-45 356.8 8.3 269 480-756 23-302 (327)
137 2w5a_A Serine/threonine-protei 100.0 8.5E-40 2.9E-44 341.6 14.3 259 479-759 5-276 (279)
138 3mi9_A Cell division protein k 100.0 2.5E-39 8.7E-44 349.9 18.4 274 480-757 17-318 (351)
139 2izr_A Casein kinase I isoform 100.0 8.8E-40 3E-44 350.4 14.7 259 479-758 8-282 (330)
140 3byv_A Rhoptry kinase; malaria 100.0 5E-41 1.7E-45 366.9 4.8 257 479-760 72-369 (377)
141 3kvw_A DYRK2, dual specificity 100.0 1.2E-39 3.9E-44 361.6 15.8 272 479-764 96-422 (429)
142 3nsz_A CK II alpha, casein kin 100.0 1.7E-39 5.9E-44 348.1 16.6 260 480-758 36-327 (330)
143 1cm8_A Phosphorylated MAP kina 100.0 3.2E-39 1.1E-43 350.8 18.9 270 479-757 24-314 (367)
144 3op5_A Serine/threonine-protei 100.0 1E-39 3.4E-44 354.8 14.9 268 479-759 34-331 (364)
145 4fvq_A Tyrosine-protein kinase 100.0 7.2E-40 2.4E-44 344.1 13.3 249 480-756 8-274 (289)
146 3lij_A Calcium/calmodulin depe 100.0 2.9E-39 9.8E-44 365.6 19.1 256 479-757 36-298 (494)
147 2ivs_A Proto-oncogene tyrosine 100.0 1.4E-39 4.7E-44 346.1 15.4 255 479-757 22-311 (314)
148 2h6d_A 5'-AMP-activated protei 100.0 2.3E-39 7.9E-44 337.8 16.8 254 480-759 11-270 (276)
149 3com_A Serine/threonine-protei 100.0 2.7E-39 9.1E-44 344.0 17.5 256 478-757 27-285 (314)
150 1csn_A Casein kinase-1; phosph 100.0 2.3E-39 8E-44 341.6 16.9 257 480-760 10-286 (298)
151 2ozo_A Tyrosine-protein kinase 100.0 5E-39 1.7E-43 371.5 21.2 246 487-757 343-598 (613)
152 3lzb_A Epidermal growth factor 100.0 1.4E-39 4.9E-44 348.1 15.4 253 480-757 15-278 (327)
153 3nyv_A Calmodulin-domain prote 100.0 2.6E-39 8.7E-44 365.4 18.1 256 479-758 25-289 (484)
154 1rjb_A FL cytokine receptor; k 100.0 2.5E-39 8.5E-44 349.0 17.2 255 479-757 44-334 (344)
155 1x8b_A WEE1HU, WEE1-like prote 100.0 1.8E-39 6.2E-44 340.5 15.6 252 478-758 9-287 (289)
156 3q5i_A Protein kinase; CDPK, m 100.0 3.4E-39 1.2E-43 365.9 19.0 260 478-760 34-311 (504)
157 2eva_A TAK1 kinase - TAB1 chim 100.0 4.6E-39 1.6E-43 341.1 18.8 253 480-757 8-263 (307)
158 3q60_A ROP5B; pseudokinase, tr 100.0 2E-40 6.9E-45 361.3 8.2 270 480-760 62-362 (371)
159 3e3p_A Protein kinase, putativ 100.0 5.1E-39 1.7E-43 348.8 19.2 281 473-758 16-322 (360)
160 2rku_A Serine/threonine-protei 100.0 3E-39 1E-43 340.2 16.7 253 480-758 15-273 (294)
161 3qyz_A Mitogen-activated prote 100.0 3.2E-39 1.1E-43 350.8 17.4 269 478-759 25-322 (364)
162 3cc6_A Protein tyrosine kinase 100.0 2.6E-39 8.8E-44 338.5 16.0 255 479-758 11-274 (281)
163 3kmu_A ILK, integrin-linked ki 100.0 4.7E-39 1.6E-43 334.2 17.9 252 480-756 10-269 (271)
164 3mwu_A Calmodulin-domain prote 100.0 4.2E-39 1.4E-43 363.6 18.9 256 479-758 21-284 (486)
165 2vwi_A Serine/threonine-protei 100.0 1E-39 3.4E-44 345.3 12.9 264 479-757 14-294 (303)
166 3c4z_A Rhodopsin kinase; Ser/T 100.0 4E-39 1.4E-43 363.8 18.4 256 479-756 184-454 (543)
167 2owb_A Serine/threonine-protei 100.0 1.8E-39 6.1E-44 348.7 14.8 254 479-758 40-299 (335)
168 3kfa_A Tyrosine-protein kinase 100.0 2.6E-39 9.1E-44 339.5 15.5 255 478-757 11-271 (288)
169 4e5w_A Tyrosine-protein kinase 100.0 1.1E-39 3.8E-44 344.9 12.7 266 481-755 22-300 (302)
170 1mqb_A Ephrin type-A receptor 100.0 4E-39 1.4E-43 345.6 17.2 253 481-757 45-309 (333)
171 3gxj_A TGF-beta receptor type- 100.0 2.2E-40 7.6E-45 350.3 7.1 265 479-761 2-301 (303)
172 2pml_X PFPK7, Ser/Thr protein 100.0 1.4E-39 4.7E-44 351.6 13.2 268 479-757 30-329 (348)
173 2xrw_A Mitogen-activated prote 100.0 9E-39 3.1E-43 348.1 19.7 269 479-756 24-324 (371)
174 2r3i_A Cell division protein k 100.0 1.3E-38 4.6E-43 336.1 20.2 267 480-757 3-290 (299)
175 2pvf_A Fibroblast growth facto 100.0 4.7E-39 1.6E-43 345.3 16.9 256 479-758 34-319 (334)
176 1u59_A Tyrosine-protein kinase 100.0 6.3E-39 2.2E-43 336.6 17.5 252 481-757 10-272 (287)
177 3og7_A AKAP9-BRAF fusion prote 100.0 8.6E-39 2.9E-43 335.9 18.6 255 479-756 23-287 (289)
178 2fst_X Mitogen-activated prote 100.0 2.6E-39 8.9E-44 351.2 15.0 266 479-757 28-318 (367)
179 2h8h_A Proto-oncogene tyrosine 100.0 1.7E-39 5.8E-44 370.2 14.1 253 479-757 266-523 (535)
180 3lm5_A Serine/threonine-protei 100.0 5.8E-39 2E-43 343.5 17.3 260 475-756 23-293 (327)
181 3n9x_A Phosphotransferase; mal 100.0 5.1E-39 1.7E-43 357.1 17.5 271 479-757 25-368 (432)
182 1j1b_A Glycogen synthase kinas 100.0 3.6E-39 1.2E-43 356.8 16.1 268 481-757 55-343 (420)
183 3c1x_A Hepatocyte growth facto 100.0 2.6E-39 9E-44 351.7 14.6 253 481-756 90-354 (373)
184 2h34_A Serine/threonine-protei 100.0 9.6E-39 3.3E-43 339.0 18.4 255 479-756 33-295 (309)
185 3fme_A Dual specificity mitoge 100.0 3.9E-39 1.3E-43 338.6 15.2 256 479-759 6-275 (290)
186 1t46_A HOMO sapiens V-KIT hard 100.0 4.3E-39 1.5E-43 342.2 15.6 253 480-756 23-306 (313)
187 2a19_B Interferon-induced, dou 100.0 4.9E-39 1.7E-43 336.7 15.8 258 478-761 9-278 (284)
188 2x7f_A TRAF2 and NCK-interacti 100.0 2.9E-39 9.9E-44 345.7 14.3 269 470-757 14-293 (326)
189 1vzo_A Ribosomal protein S6 ki 100.0 1.4E-39 4.9E-44 352.1 11.9 254 480-756 54-327 (355)
190 2wtk_C Serine/threonine-protei 100.0 1.8E-38 6.2E-43 336.1 20.1 257 479-759 4-272 (305)
191 1fvr_A Tyrosine-protein kinase 100.0 9.8E-39 3.4E-43 341.8 17.9 254 480-757 25-300 (327)
192 1qpc_A LCK kinase; alpha beta 100.0 8.3E-39 2.8E-43 334.2 16.9 251 480-756 13-268 (279)
193 3pfq_A PKC-B, PKC-beta, protei 100.0 6.6E-39 2.2E-43 374.0 17.6 252 479-756 340-603 (674)
194 1zy4_A Serine/threonine-protei 100.0 2.5E-39 8.5E-44 342.0 12.6 263 478-758 4-291 (303)
195 4e7w_A Glycogen synthase kinas 100.0 3.6E-39 1.2E-43 353.8 14.2 270 480-757 40-328 (394)
196 2i6l_A Mitogen-activated prote 100.0 9.9E-39 3.4E-43 340.3 16.8 268 480-757 11-312 (320)
197 1byg_A CSK, protein (C-termina 100.0 3.2E-39 1.1E-43 337.2 12.7 252 479-757 20-273 (278)
198 1p4o_A Insulin-like growth fac 100.0 3.1E-39 1.1E-43 344.8 12.8 259 473-755 18-297 (322)
199 4exu_A Mitogen-activated prote 100.0 1.8E-38 6.2E-43 345.7 19.1 270 479-757 41-330 (371)
200 1phk_A Phosphorylase kinase; g 100.0 7.7E-39 2.6E-43 337.8 15.4 259 478-758 15-291 (298)
201 2yfx_A Tyrosine-protein kinase 100.0 8E-39 2.7E-43 342.5 15.5 256 480-759 30-306 (327)
202 1blx_A Cyclin-dependent kinase 100.0 3.3E-38 1.1E-42 337.4 20.3 275 477-757 8-303 (326)
203 2w1i_A JAK2; chromosomal rearr 100.0 5.3E-39 1.8E-43 343.7 14.1 264 480-756 41-321 (326)
204 3an0_A Dual specificity mitoge 100.0 5.8E-39 2E-43 345.5 14.2 257 478-759 49-319 (340)
205 3uzp_A CKI-delta, CKID, casein 100.0 1.1E-38 3.8E-43 336.1 16.0 262 479-763 8-286 (296)
206 3mdy_A Bone morphogenetic prot 100.0 1.7E-38 6E-43 341.2 17.6 268 476-761 33-335 (337)
207 4eut_A Serine/threonine-protei 100.0 1.6E-38 5.6E-43 349.1 17.6 268 480-757 9-309 (396)
208 4fl3_A Tyrosine-protein kinase 100.0 1.1E-38 3.7E-43 369.6 17.0 244 486-755 375-629 (635)
209 2ycf_A Serine/threonine-protei 100.0 9.1E-39 3.1E-43 341.2 15.1 255 479-756 9-280 (322)
210 2v62_A Serine/threonine-protei 100.0 4.3E-39 1.5E-43 347.2 12.5 262 480-756 37-327 (345)
211 3brb_A Proto-oncogene tyrosine 100.0 2.8E-38 9.5E-43 336.0 18.6 260 478-756 32-307 (313)
212 3rgf_A Cyclin-dependent kinase 100.0 2E-38 6.7E-43 349.8 18.0 266 481-757 21-340 (405)
213 2xir_A Vascular endothelial gr 100.0 9.2E-39 3.2E-43 340.1 14.8 263 472-757 19-310 (316)
214 2b9h_A MAP kinase FUS3, mitoge 100.0 1.4E-38 4.8E-43 344.4 16.3 268 479-758 10-313 (353)
215 3lxp_A Non-receptor tyrosine-p 100.0 3.1E-39 1E-43 344.2 10.7 264 482-756 33-309 (318)
216 3coi_A Mitogen-activated prote 100.0 4.9E-38 1.7E-42 340.1 20.2 269 480-758 24-313 (353)
217 2buj_A Serine/threonine-protei 100.0 3.3E-39 1.1E-43 343.8 10.7 258 480-757 29-306 (317)
218 4hgt_A Casein kinase I isoform 100.0 1.4E-38 4.7E-43 335.4 15.1 264 477-763 6-286 (296)
219 3fhr_A MAP kinase-activated pr 100.0 8.2E-39 2.8E-43 343.5 13.5 263 478-758 26-295 (336)
220 2i1m_A Macrophage colony-stimu 100.0 8.4E-39 2.9E-43 343.2 13.5 256 479-758 45-327 (333)
221 3pls_A Macrophage-stimulating 100.0 3.9E-38 1.3E-42 332.3 18.4 253 482-757 23-287 (298)
222 2vx3_A Dual specificity tyrosi 100.0 2.4E-38 8.3E-43 346.2 17.3 269 478-757 52-379 (382)
223 3f66_A Hepatocyte growth facto 100.0 2.5E-38 8.6E-43 333.9 16.8 254 480-756 25-290 (298)
224 1xbb_A Tyrosine-protein kinase 100.0 2.5E-38 8.5E-43 332.8 16.7 250 480-755 16-277 (291)
225 3ll6_A Cyclin G-associated kin 100.0 2.2E-38 7.6E-43 340.2 16.3 260 480-760 28-311 (337)
226 2jii_A Serine/threonine-protei 100.0 7.6E-39 2.6E-43 346.3 12.6 262 480-763 42-342 (352)
227 2wei_A Calmodulin-domain prote 100.0 4.8E-38 1.6E-42 329.9 18.0 258 478-758 20-284 (287)
228 2wqm_A Serine/threonine-protei 100.0 7.7E-38 2.6E-42 332.2 19.8 259 480-759 32-299 (310)
229 1b6c_B TGF-B superfamily recep 100.0 2.2E-38 7.6E-43 341.2 15.2 268 476-761 38-340 (342)
230 2iwi_A Serine/threonine-protei 100.0 8.5E-39 2.9E-43 339.9 11.7 253 475-759 26-292 (312)
231 1z57_A Dual specificity protei 100.0 3.6E-38 1.2E-42 338.8 16.5 267 479-758 13-336 (339)
232 4eco_A Uncharacterized protein 100.0 7E-38 2.4E-42 364.9 20.2 313 29-362 28-470 (636)
233 3cek_A Dual specificity protei 100.0 3.4E-38 1.1E-42 335.4 15.6 257 477-760 25-302 (313)
234 1wak_A Serine/threonine-protei 100.0 2.7E-38 9.2E-43 347.7 15.1 269 479-755 36-396 (397)
235 3a99_A Proto-oncogene serine/t 100.0 1E-38 3.5E-43 340.4 11.1 250 477-758 40-301 (320)
236 3g2f_A Bone morphogenetic prot 100.0 2.5E-38 8.6E-43 339.9 12.8 270 480-757 13-318 (336)
237 1u46_A ACK-1, activated CDC42 100.0 3.2E-38 1.1E-42 331.8 12.4 254 480-757 18-284 (291)
238 3e7e_A HBUB1, BUB1A, mitotic c 100.0 7.7E-38 2.6E-42 340.1 15.3 244 478-753 63-335 (365)
239 3aln_A Dual specificity mitoge 100.0 8.7E-38 3E-42 334.4 15.4 261 480-759 22-294 (327)
240 2eu9_A Dual specificity protei 100.0 1.1E-37 3.8E-42 337.3 15.4 267 479-758 18-341 (355)
241 1q8y_A SR protein kinase; tran 100.0 6.6E-38 2.3E-42 341.7 13.3 272 480-759 19-342 (373)
242 3m2w_A MAP kinase-activated pr 100.0 2.1E-37 7.2E-42 327.0 16.7 241 480-758 17-264 (299)
243 4ecn_A Leucine-rich repeat pro 100.0 3.9E-37 1.3E-41 364.8 20.8 315 26-362 264-710 (876)
244 3sv0_A Casein kinase I-like; t 100.0 2.9E-37 9.8E-42 345.4 18.2 255 479-757 6-278 (483)
245 2rio_A Serine/threonine-protei 100.0 1.7E-37 5.7E-42 344.9 15.8 252 481-756 16-301 (434)
246 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.2E-37 4.2E-42 331.9 14.1 252 479-757 32-302 (319)
247 2j0j_A Focal adhesion kinase 1 100.0 2.3E-37 7.7E-42 359.9 17.3 255 479-758 389-652 (656)
248 3p23_A Serine/threonine-protei 100.0 5.7E-38 1.9E-42 347.7 10.5 251 480-756 24-289 (432)
249 2dyl_A Dual specificity mitoge 100.0 3.4E-37 1.2E-41 328.2 15.2 254 479-756 24-289 (318)
250 3uqc_A Probable conserved tran 100.0 7.3E-37 2.5E-41 320.3 13.6 231 480-758 31-266 (286)
251 3rgz_A Protein brassinosteroid 100.0 4.3E-36 1.5E-40 357.8 21.3 255 111-366 393-721 (768)
252 3qa8_A MGC80376 protein; kinas 100.0 2.3E-37 7.7E-42 353.3 7.9 272 480-757 14-304 (676)
253 3dzo_A Rhoptry kinase domain; 100.0 2.1E-36 7.3E-41 333.8 10.8 254 479-757 77-370 (413)
254 2pzi_A Probable serine/threoni 100.0 2E-35 6.7E-40 347.0 11.0 243 480-755 80-325 (681)
255 2vuw_A Serine/threonine-protei 100.0 1E-35 3.4E-40 319.7 6.6 252 480-755 20-336 (336)
256 3v47_A TOLL-like receptor 5B a 100.0 1.9E-33 6.6E-38 315.0 19.0 268 96-364 38-386 (455)
257 4fcg_A Uncharacterized protein 100.0 3.4E-33 1.2E-37 298.3 15.5 275 28-361 24-313 (328)
258 3v47_A TOLL-like receptor 5B a 100.0 2E-32 6.7E-37 306.8 20.4 288 76-364 30-410 (455)
259 2id5_A Lingo-1, leucine rich r 100.0 1.3E-31 4.5E-36 301.9 25.3 286 77-363 33-334 (477)
260 4eco_A Uncharacterized protein 100.0 9.7E-32 3.3E-36 313.1 17.0 260 98-363 193-502 (636)
261 2id5_A Lingo-1, leucine rich r 100.0 1E-30 3.5E-35 294.7 23.9 294 70-365 15-312 (477)
262 1ogq_A PGIP-2, polygalacturona 100.0 1.5E-31 5.3E-36 283.7 16.0 231 112-366 50-285 (313)
263 3oja_B Anopheles plasmodium-re 100.0 1.5E-30 5.2E-35 301.2 24.7 261 97-364 60-339 (597)
264 3vq2_A TLR4, TOLL-like recepto 100.0 2.4E-30 8E-35 300.8 24.8 289 77-365 33-513 (606)
265 4g8a_A TOLL-like receptor 4; l 100.0 3.8E-30 1.3E-34 300.5 24.5 173 48-222 12-187 (635)
266 3t6q_A CD180 antigen; protein- 100.0 5E-30 1.7E-34 298.0 25.4 257 104-361 293-559 (606)
267 4ecn_A Leucine-rich repeat pro 100.0 4.1E-30 1.4E-34 304.8 23.4 249 101-358 504-785 (876)
268 3j0a_A TOLL-like receptor 5; m 100.0 5.1E-30 1.7E-34 308.6 23.6 287 76-363 24-376 (844)
269 3o6n_A APL1; leucine-rich repe 100.0 8.3E-30 2.8E-34 279.4 23.1 251 106-363 63-332 (390)
270 3j0a_A TOLL-like receptor 5; m 100.0 7.9E-30 2.7E-34 306.9 23.6 293 70-365 8-354 (844)
271 3t6q_A CD180 antigen; protein- 100.0 2.2E-29 7.4E-34 292.7 25.4 267 95-364 261-538 (606)
272 1ziw_A TOLL-like receptor 3; i 100.0 2.2E-29 7.4E-34 296.8 24.6 265 98-363 35-343 (680)
273 1xku_A Decorin; proteoglycan, 100.0 9.4E-29 3.2E-33 264.6 27.3 246 112-362 52-306 (330)
274 4fcg_A Uncharacterized protein 100.0 1.8E-29 6E-34 269.5 20.4 227 74-338 79-314 (328)
275 3vq2_A TLR4, TOLL-like recepto 100.0 7.4E-29 2.5E-33 288.1 27.2 302 59-365 5-489 (606)
276 2z7x_B TOLL-like receptor 1, v 100.0 2.3E-29 8E-34 286.8 22.1 112 253-367 303-417 (520)
277 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 7.4E-29 2.5E-33 285.3 26.5 259 95-362 59-463 (562)
278 1xku_A Decorin; proteoglycan, 100.0 7.1E-29 2.4E-33 265.5 24.4 260 94-360 58-330 (330)
279 2ft3_A Biglycan; proteoglycan, 100.0 7.6E-29 2.6E-33 265.5 24.4 245 112-362 54-307 (332)
280 2z7x_B TOLL-like receptor 1, v 100.0 4.8E-29 1.6E-33 284.2 23.6 132 228-363 321-458 (520)
281 2z81_A CD282 antigen, TOLL-lik 100.0 1.6E-29 5.5E-34 290.1 17.3 266 95-363 33-424 (549)
282 2z63_A TOLL-like receptor 4, v 100.0 6.7E-29 2.3E-33 286.3 22.1 138 228-365 370-510 (570)
283 2ft3_A Biglycan; proteoglycan, 100.0 3.2E-28 1.1E-32 260.7 23.1 259 94-360 60-331 (332)
284 1ziw_A TOLL-like receptor 3; i 100.0 3.8E-28 1.3E-32 286.1 24.3 285 76-361 25-365 (680)
285 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5.2E-28 1.8E-32 278.2 24.4 267 79-366 34-445 (562)
286 2z63_A TOLL-like receptor 4, v 100.0 3.8E-28 1.3E-32 280.0 23.2 287 77-365 29-486 (570)
287 3zyi_A Leucine-rich repeat-con 100.0 1.4E-27 4.7E-32 267.0 25.8 226 112-339 75-304 (452)
288 3oja_B Anopheles plasmodium-re 100.0 5.4E-28 1.8E-32 279.8 23.2 276 77-364 52-360 (597)
289 2z81_A CD282 antigen, TOLL-lik 100.0 4.3E-28 1.5E-32 278.3 21.5 286 77-365 27-489 (549)
290 2z66_A Variable lymphocyte rec 100.0 1.9E-28 6.4E-33 259.3 16.6 230 112-363 28-262 (306)
291 2z80_A TOLL-like receptor 2, v 100.0 1.6E-28 5.5E-33 265.3 16.3 252 112-364 52-316 (353)
292 3zyj_A Leucine-rich repeat-con 100.0 2.5E-27 8.5E-32 263.9 25.6 225 112-338 64-292 (440)
293 1wwl_A Monocyte differentiatio 100.0 2.8E-29 9.5E-34 266.3 7.6 245 109-363 40-310 (312)
294 3o6n_A APL1; leucine-rich repe 100.0 1.3E-27 4.3E-32 262.0 20.7 251 110-363 43-309 (390)
295 1wwl_A Monocyte differentiatio 100.0 1.9E-29 6.4E-34 267.7 5.4 228 104-339 57-310 (312)
296 2z66_A Variable lymphocyte rec 100.0 1.3E-27 4.5E-32 252.8 19.2 224 116-365 11-239 (306)
297 1ozn_A Reticulon 4 receptor; N 100.0 4.9E-27 1.7E-31 245.7 22.8 209 111-341 31-241 (285)
298 3zyi_A Leucine-rich repeat-con 100.0 5.8E-27 2E-31 261.9 24.3 242 115-362 57-303 (452)
299 4fmz_A Internalin; leucine ric 99.9 1E-26 3.4E-31 250.6 23.4 243 108-365 84-327 (347)
300 3zyj_A Leucine-rich repeat-con 99.9 1.1E-26 3.7E-31 258.7 24.5 242 115-362 46-292 (440)
301 4fmz_A Internalin; leucine ric 99.9 2.4E-26 8.1E-31 247.7 25.9 239 108-363 62-301 (347)
302 3bz5_A Internalin-J, INLJ; leu 99.9 1.9E-26 6.6E-31 257.0 25.1 254 76-365 42-302 (457)
303 3bz5_A Internalin-J, INLJ; leu 99.9 3.1E-26 1E-30 255.4 26.7 266 76-363 64-353 (457)
304 4g8a_A TOLL-like receptor 4; l 99.9 2.2E-26 7.5E-31 268.5 25.9 133 112-244 52-186 (635)
305 4azs_A Methyltransferase WBDD; 99.9 6.2E-29 2.1E-33 283.6 1.6 182 486-682 240-435 (569)
306 1o6v_A Internalin A; bacterial 99.9 5.5E-26 1.9E-30 255.0 25.3 266 76-363 68-345 (466)
307 1o6v_A Internalin A; bacterial 99.9 6.5E-26 2.2E-30 254.4 25.4 269 77-366 47-326 (466)
308 1jl5_A Outer protein YOPM; leu 99.9 1.3E-25 4.6E-30 250.0 26.6 221 112-363 131-371 (454)
309 1ozn_A Reticulon 4 receptor; N 99.9 5.1E-26 1.7E-30 238.0 21.7 224 115-363 14-239 (285)
310 2z80_A TOLL-like receptor 2, v 99.9 5.1E-27 1.7E-31 253.6 14.1 247 95-342 59-318 (353)
311 1jl5_A Outer protein YOPM; leu 99.9 4.2E-25 1.4E-29 246.1 26.5 224 111-363 110-351 (454)
312 2z62_A TOLL-like receptor 4, v 99.9 7.5E-26 2.6E-30 235.5 17.6 208 112-342 28-241 (276)
313 3g06_A SSPH2 (leucine-rich rep 99.9 1.2E-25 4.3E-30 258.0 20.6 278 49-366 12-301 (622)
314 3o53_A Protein LRIM1, AGAP0063 99.9 1.1E-27 3.7E-32 254.6 2.6 236 106-356 28-269 (317)
315 3oja_A Leucine-rich immune mol 99.9 4.9E-27 1.7E-31 264.2 7.3 214 110-338 32-250 (487)
316 2o6q_A Variable lymphocyte rec 99.9 8.8E-25 3E-29 226.6 22.9 217 59-339 3-219 (270)
317 3o53_A Protein LRIM1, AGAP0063 99.9 4.8E-26 1.6E-30 242.0 10.9 236 113-362 11-250 (317)
318 3oja_A Leucine-rich immune mol 99.9 1.1E-25 3.7E-30 253.2 12.7 215 134-362 32-250 (487)
319 2z62_A TOLL-like receptor 4, v 99.9 2E-24 6.7E-29 224.8 19.3 222 118-364 13-239 (276)
320 3rfs_A Internalin B, repeat mo 99.9 8.8E-25 3E-29 226.8 16.4 210 107-349 36-246 (272)
321 1p9a_G Platelet glycoprotein I 99.9 2.4E-23 8.3E-28 217.8 20.8 202 108-338 6-208 (290)
322 2o6q_A Variable lymphocyte rec 99.9 5.1E-23 1.7E-27 213.3 22.9 203 113-363 17-219 (270)
323 4glp_A Monocyte differentiatio 99.9 1.2E-23 4E-28 222.8 18.4 226 112-362 64-307 (310)
324 1p9a_G Platelet glycoprotein I 99.9 3.8E-23 1.3E-27 216.3 20.7 204 131-362 5-208 (290)
325 3rfs_A Internalin B, repeat mo 99.9 1.8E-23 6E-28 217.0 17.5 206 76-326 41-247 (272)
326 3en9_A Glycoprotease, O-sialog 99.9 7.5E-25 2.6E-29 248.5 5.7 181 483-685 339-538 (540)
327 2xwt_C Thyrotropin receptor; s 99.9 5.8E-23 2E-27 208.8 17.0 195 113-335 32-236 (239)
328 4glp_A Monocyte differentiatio 99.9 1.4E-23 4.6E-28 222.3 12.6 202 110-338 89-307 (310)
329 2xwt_C Thyrotropin receptor; s 99.9 7.9E-23 2.7E-27 207.8 17.1 203 127-359 25-236 (239)
330 3g06_A SSPH2 (leucine-rich rep 99.9 2E-22 6.7E-27 231.5 21.7 240 76-349 61-308 (622)
331 2ca6_A RAN GTPase-activating p 99.9 6.7E-25 2.3E-29 239.9 -1.3 238 106-364 26-318 (386)
332 1h6u_A Internalin H; cell adhe 99.9 1.6E-22 5.5E-27 213.6 15.9 195 108-339 37-231 (308)
333 3m19_A Variable lymphocyte rec 99.9 8.2E-22 2.8E-26 201.8 20.5 181 112-340 14-194 (251)
334 3goz_A Leucine-rich repeat-con 99.9 4.9E-24 1.7E-28 230.9 3.7 246 117-363 3-298 (362)
335 3m19_A Variable lymphocyte rec 99.9 7.8E-22 2.7E-26 202.0 19.6 163 59-242 3-166 (251)
336 2ca6_A RAN GTPase-activating p 99.9 2.5E-24 8.5E-29 235.4 -1.3 224 127-363 23-288 (386)
337 3goz_A Leucine-rich repeat-con 99.9 1.3E-23 4.5E-28 227.5 3.9 249 95-344 5-303 (362)
338 2ast_B S-phase kinase-associat 99.9 5.4E-24 1.9E-28 228.1 0.3 228 71-335 42-282 (336)
339 1z7x_W Ribonuclease inhibitor; 99.9 1.3E-24 4.5E-29 243.5 -4.7 260 104-364 105-413 (461)
340 1zar_A RIO2 kinase; serine kin 99.9 2.3E-22 7.9E-27 209.1 10.3 142 472-636 82-241 (282)
341 2ast_B S-phase kinase-associat 99.9 3.7E-23 1.3E-27 221.5 4.0 219 113-359 48-282 (336)
342 1h6u_A Internalin H; cell adhe 99.9 1.1E-21 3.8E-26 207.2 14.5 207 118-363 25-231 (308)
343 2o6s_A Variable lymphocyte rec 99.9 1.2E-21 4.2E-26 194.4 13.7 178 111-321 27-205 (208)
344 3cvr_A Invasion plasmid antige 99.9 1.9E-21 6.5E-26 220.5 16.4 188 112-348 59-253 (571)
345 3cvr_A Invasion plasmid antige 99.9 3.4E-21 1.2E-25 218.5 17.7 219 50-324 34-253 (571)
346 1z7x_W Ribonuclease inhibitor; 99.9 5.8E-24 2E-28 238.2 -5.6 255 108-363 24-327 (461)
347 2o6s_A Variable lymphocyte rec 99.8 8.3E-21 2.8E-25 188.4 15.5 178 116-348 11-188 (208)
348 4ay9_X Follicle-stimulating ho 99.8 1.3E-20 4.5E-25 202.8 17.9 220 112-358 30-255 (350)
349 4ay9_X Follicle-stimulating ho 99.8 6.2E-20 2.1E-24 197.5 19.6 212 116-352 13-229 (350)
350 3e6j_A Variable lymphocyte rec 99.8 1E-19 3.5E-24 183.3 15.3 136 112-248 40-176 (229)
351 1m9s_A Internalin B; cell inva 99.8 2.4E-20 8.3E-25 213.8 10.9 173 109-316 40-212 (605)
352 4b8c_D Glucose-repressible alc 99.8 3.6E-21 1.2E-25 226.3 3.4 200 28-250 129-335 (727)
353 1h6t_A Internalin B; cell adhe 99.8 1.7E-19 5.7E-24 188.8 13.6 171 134-339 44-214 (291)
354 1m9s_A Internalin B; cell inva 99.8 1.6E-19 5.6E-24 206.9 13.4 198 111-345 20-217 (605)
355 1h6t_A Internalin B; cell adhe 99.8 2.1E-19 7.3E-24 188.0 13.1 176 107-317 41-216 (291)
356 1dce_A Protein (RAB geranylger 99.8 7.6E-22 2.6E-26 225.0 -7.2 190 133-355 346-566 (567)
357 2v70_A SLIT-2, SLIT homolog 2 99.8 1.1E-18 3.8E-23 174.5 16.4 136 112-247 32-169 (220)
358 2v9t_B SLIT homolog 2 protein 99.8 4.3E-19 1.5E-23 177.5 13.4 134 112-245 32-166 (220)
359 2v70_A SLIT-2, SLIT homolog 2 99.8 1E-18 3.4E-23 174.9 15.9 69 272-340 100-168 (220)
360 2v9t_B SLIT homolog 2 protein 99.8 1E-18 3.6E-23 174.7 16.0 151 140-338 15-165 (220)
361 2xot_A Amphoterin-induced prot 99.8 3.7E-19 1.3E-23 192.3 13.1 111 113-223 40-151 (361)
362 1zth_A RIO1 serine protein kin 99.8 7.6E-20 2.6E-24 187.8 6.5 136 482-637 49-219 (258)
363 2xot_A Amphoterin-induced prot 99.8 4.7E-19 1.6E-23 191.5 13.0 127 115-244 21-149 (361)
364 3e6j_A Variable lymphocyte rec 99.8 3.2E-18 1.1E-22 172.3 17.4 102 117-221 24-125 (229)
365 4ezg_A Putative uncharacterize 99.8 8.7E-19 3E-23 172.2 11.4 131 109-243 41-171 (197)
366 1xeu_A Internalin C; cellular 99.8 7.5E-19 2.6E-23 180.9 9.8 170 135-340 18-187 (263)
367 1xeu_A Internalin C; cellular 99.8 7.9E-19 2.7E-23 180.7 8.5 172 110-317 17-188 (263)
368 4b8c_D Glucose-repressible alc 99.7 2.1E-19 7.1E-24 211.3 3.9 219 112-363 173-405 (727)
369 4ezg_A Putative uncharacterize 99.7 8.5E-18 2.9E-22 165.1 12.5 106 132-241 40-146 (197)
370 1w8a_A SLIT protein; signaling 99.7 6.6E-18 2.3E-22 165.0 9.7 113 113-225 30-143 (192)
371 1dce_A Protein (RAB geranylger 99.7 3.2E-20 1.1E-24 211.6 -9.1 189 157-365 346-549 (567)
372 1w8a_A SLIT protein; signaling 99.7 4.4E-17 1.5E-21 159.2 13.7 131 115-248 11-143 (192)
373 2ell_A Acidic leucine-rich nuc 99.7 3.4E-17 1.2E-21 156.3 10.4 133 110-244 22-160 (168)
374 3ogk_B Coronatine-insensitive 99.7 1.2E-18 3.9E-23 201.6 -0.0 255 104-362 212-526 (592)
375 2je0_A Acidic leucine-rich nuc 99.7 3E-17 1E-21 153.3 6.8 128 111-240 16-149 (149)
376 4gyi_A RIO2 kinase; protein ki 99.7 6.1E-17 2.1E-21 172.3 7.6 134 481-635 96-263 (397)
377 3ogk_B Coronatine-insensitive 99.7 4.8E-18 1.7E-22 196.4 -1.8 243 113-357 139-411 (592)
378 2o6r_A Variable lymphocyte rec 99.7 3.8E-16 1.3E-20 150.4 11.4 114 112-225 28-141 (177)
379 2wfh_A SLIT homolog 2 protein 99.6 9.8E-16 3.4E-20 149.6 13.7 108 113-221 32-139 (193)
380 2ell_A Acidic leucine-rich nuc 99.6 4.4E-16 1.5E-20 148.5 10.9 107 135-243 23-132 (168)
381 2o6r_A Variable lymphocyte rec 99.6 1.5E-15 5.2E-20 146.2 13.9 132 114-248 9-141 (177)
382 2wfh_A SLIT homolog 2 protein 99.6 2.7E-15 9.1E-20 146.5 15.0 128 115-246 13-141 (193)
383 2je0_A Acidic leucine-rich nuc 99.6 6.2E-16 2.1E-20 144.3 8.3 131 135-286 16-149 (149)
384 3sb4_A Hypothetical leucine ri 99.6 2.4E-15 8.3E-20 160.1 11.6 235 111-355 48-327 (329)
385 1a9n_A U2A', U2A'; complex (nu 99.6 1.7E-15 5.9E-20 145.6 7.5 133 107-244 14-153 (176)
386 1ds9_A Outer arm dynein; leuci 99.6 2.6E-17 8.9E-22 161.7 -6.6 108 109-221 15-128 (198)
387 3g39_A Variable lymphocyte rec 99.5 2.3E-14 7.8E-19 136.8 11.4 108 115-225 12-119 (170)
388 1a9n_A U2A', U2A'; complex (nu 99.5 9.2E-15 3.1E-19 140.5 8.0 109 131-243 14-125 (176)
389 2r9u_A Variable lymphocyte rec 99.5 1.7E-14 5.8E-19 138.2 9.7 108 115-225 15-122 (174)
390 1ds9_A Outer arm dynein; leuci 99.5 1.3E-16 4.5E-21 156.7 -6.9 106 132-241 14-125 (198)
391 2p1m_B Transport inhibitor res 99.5 2E-16 6.9E-21 182.8 -6.7 246 110-357 103-405 (594)
392 2p1m_B Transport inhibitor res 99.5 3.9E-16 1.3E-20 180.4 -4.3 63 299-362 430-494 (594)
393 3g39_A Variable lymphocyte rec 99.5 1.4E-13 4.6E-18 131.4 12.2 109 137-248 10-119 (170)
394 2r9u_A Variable lymphocyte rec 99.5 2.1E-13 7.3E-18 130.5 12.3 107 138-247 14-121 (174)
395 3sb4_A Hypothetical leucine ri 99.4 2.2E-13 7.4E-18 145.0 10.8 242 111-364 24-312 (329)
396 4fdw_A Leucine rich hypothetic 99.4 1E-11 3.4E-16 135.2 21.1 222 106-339 130-359 (401)
397 2ifg_A High affinity nerve gro 99.4 1.4E-12 4.9E-17 139.7 10.5 102 117-221 13-116 (347)
398 4fdw_A Leucine rich hypothetic 99.3 3.7E-11 1.3E-15 130.8 19.1 222 105-337 151-382 (401)
399 2ifg_A High affinity nerve gro 99.3 5.7E-12 2E-16 135.0 11.0 105 139-245 11-117 (347)
400 3tm0_A Aminoglycoside 3'-phosp 99.3 1.1E-11 3.8E-16 127.1 10.9 147 475-635 9-212 (263)
401 3un9_A NLR family member X1; l 99.2 8.4E-14 2.9E-18 150.2 -8.6 110 112-221 72-196 (372)
402 3un9_A NLR family member X1; l 99.2 1.6E-13 5.4E-18 148.0 -8.3 86 136-221 72-168 (372)
403 1nd4_A Aminoglycoside 3'-phosp 99.2 5.7E-11 1.9E-15 121.5 10.5 135 482-635 22-213 (264)
404 3dxp_A Putative acyl-COA dehyd 99.0 1E-09 3.5E-14 118.0 9.9 145 484-636 42-248 (359)
405 4fs7_A Uncharacterized protein 98.8 6.2E-08 2.1E-12 105.4 18.0 216 130-356 156-373 (394)
406 2ra8_A Uncharacterized protein 98.8 7.4E-10 2.5E-14 118.3 2.4 61 153-216 165-227 (362)
407 3sg8_A APH(2'')-ID; antibiotic 98.8 1.5E-09 5E-14 113.9 3.5 189 485-686 25-288 (304)
408 4fs7_A Uncharacterized protein 98.8 9.2E-08 3.1E-12 104.0 17.2 102 251-359 252-353 (394)
409 3rw6_A Nuclear RNA export fact 98.8 7.9E-11 2.7E-15 119.4 -6.7 104 132-237 137-257 (267)
410 2ra8_A Uncharacterized protein 98.7 1.3E-09 4.5E-14 116.3 1.0 113 106-221 133-265 (362)
411 4gt6_A Cell surface protein; l 98.6 2.4E-06 8.2E-11 92.7 22.8 246 105-359 80-367 (394)
412 3rw6_A Nuclear RNA export fact 98.6 4.2E-09 1.4E-13 106.7 -1.6 106 108-215 137-258 (267)
413 3d1u_A Putative fructosamine-3 98.5 5E-07 1.7E-11 93.4 13.4 76 484-570 19-97 (288)
414 1io0_A Tropomodulin; LRR prote 98.5 1.9E-08 6.6E-13 96.8 -0.3 116 106-221 30-164 (185)
415 3r70_A Aminoglycoside phosphot 98.4 6.3E-07 2.1E-11 94.4 11.2 136 481-636 38-237 (320)
416 4gt6_A Cell surface protein; l 98.3 6.2E-05 2.1E-09 81.5 22.4 246 106-359 57-344 (394)
417 1io0_A Tropomodulin; LRR prote 98.3 7.3E-08 2.5E-12 92.7 -0.9 115 129-243 29-163 (185)
418 3tdw_A Gentamicin resistance p 98.2 4.9E-06 1.7E-10 86.9 11.6 137 485-636 24-224 (306)
419 4gkh_A Aminoglycoside 3'-phosp 98.2 3.3E-06 1.1E-10 86.4 10.0 134 487-635 31-222 (272)
420 3ats_A Putative uncharacterize 98.2 2.3E-06 7.7E-11 91.6 8.6 83 486-572 26-122 (357)
421 4h09_A Hypothetical leucine ri 98.2 8.8E-05 3E-09 79.8 21.1 240 106-356 63-340 (379)
422 3ovc_A Hygromycin-B 4-O-kinase 98.1 6.9E-06 2.4E-10 87.8 10.2 139 484-636 45-243 (362)
423 2olc_A MTR kinase, methylthior 97.9 6.1E-05 2.1E-09 81.7 13.5 75 485-568 35-120 (397)
424 4h09_A Hypothetical leucine ri 97.9 0.00086 2.9E-08 71.9 21.3 243 106-359 40-320 (379)
425 3f7w_A Putative fructosamine-3 97.8 8.6E-05 2.9E-09 76.6 12.0 77 482-569 17-96 (288)
426 2q83_A YTAA protein; 2635576, 97.7 4.5E-05 1.5E-09 80.7 7.8 143 486-634 38-250 (346)
427 3jr1_A Putative fructosamine-3 97.6 0.00019 6.4E-09 74.6 10.5 137 484-632 40-232 (312)
428 3e4g_A ATP synthase subunit S, 97.5 3.6E-05 1.2E-09 72.1 2.2 82 137-218 62-149 (176)
429 2ppq_A HSK, HK, homoserine kin 97.4 0.00042 1.4E-08 72.5 10.2 164 468-635 5-216 (322)
430 1zyl_A Hypothetical protein YI 97.4 0.0017 5.9E-08 68.0 13.9 162 468-635 9-222 (328)
431 2pyw_A Uncharacterized protein 97.2 0.0011 3.7E-08 72.3 11.0 30 606-636 232-261 (420)
432 3e4g_A ATP synthase subunit S, 97.2 0.0001 3.5E-09 69.1 2.2 84 112-195 61-150 (176)
433 3dxq_A Choline/ethanolamine ki 97.1 0.0014 4.8E-08 67.8 9.6 71 485-570 23-95 (301)
434 3csv_A Aminoglycoside phosphot 96.9 0.0029 9.8E-08 66.4 10.4 30 606-635 183-216 (333)
435 3feg_A Choline/ethanolamine ki 96.8 0.0046 1.6E-07 65.9 11.0 138 486-635 56-253 (379)
436 2qg7_A Ethanolamine kinase PV0 96.8 0.005 1.7E-07 67.4 11.4 74 485-570 113-188 (458)
437 1nw1_A Choline kinase (49.2 KD 96.8 0.0048 1.6E-07 67.2 11.1 73 485-570 78-159 (429)
438 3rfe_A Platelet glycoprotein I 96.7 0.0024 8.1E-08 56.9 6.2 11 163-173 34-44 (130)
439 3rfe_A Platelet glycoprotein I 96.6 0.0028 9.6E-08 56.4 5.9 56 116-173 12-68 (130)
440 3c5i_A Choline kinase; choline 96.5 0.004 1.4E-07 66.4 7.9 73 486-570 39-121 (369)
441 1pgv_A TMD-1, tropomodulin TMD 96.5 0.0005 1.7E-08 65.6 0.6 112 108-219 37-168 (197)
442 1pgv_A TMD-1, tropomodulin TMD 96.1 0.001 3.5E-08 63.5 0.3 88 131-218 36-136 (197)
443 3i1a_A Spectinomycin phosphotr 95.7 0.035 1.2E-06 58.2 9.9 30 606-635 206-235 (339)
444 3f2s_A CK, chetk-alpha, cholin 95.3 0.054 1.9E-06 57.9 9.9 139 486-635 58-279 (401)
445 3mes_A Choline kinase; malaria 95.1 0.12 4E-06 55.8 11.8 74 485-570 75-157 (424)
446 2yle_A Protein spire homolog 1 94.9 0.021 7.2E-07 54.7 4.7 100 568-681 33-132 (229)
447 3g15_A CK, chetk-alpha, cholin 90.6 0.74 2.5E-05 49.2 9.5 28 608-635 246-279 (401)
448 2ks1_B Epidermal growth factor 84.1 0.065 2.2E-06 36.8 -2.4 29 390-418 9-37 (44)
449 3cxl_A N-chimerin; SH2, RHO-GA 79.2 0.26 8.8E-06 53.9 -1.4 59 485-546 147-214 (463)
450 4ann_A ESSB; membrane protein, 78.4 5.6 0.00019 38.0 7.8 114 534-686 43-158 (215)
451 4ano_A ESSB; membrane protein, 74.7 6.9 0.00023 37.5 7.3 68 558-634 63-131 (219)
452 2l2t_A Receptor tyrosine-prote 73.1 0.13 4.5E-06 35.1 -3.6 26 393-418 11-36 (44)
453 2k1k_A Ephrin type-A receptor 33.5 1.7 5.8E-05 28.8 -3.5 18 394-411 12-29 (38)
454 2lz0_A Uncharacterized protein 31.3 98 0.0033 25.2 6.1 14 155-168 15-28 (100)
455 2lz0_A Uncharacterized protein 29.2 62 0.0021 26.4 4.5 48 171-219 7-54 (100)
456 1cja_A Protein (actin-fragmin 20.4 4.5E+02 0.015 26.6 9.7 143 486-636 75-237 (342)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.3e-52 Score=438.96 Aligned_cols=254 Identities=21% Similarity=0.319 Sum_probs=205.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|...+.||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+.+.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~--- 89 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP--- 89 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS---
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE---
Confidence 35667789999999999999863 478899999986544445789999999999999999999999987443
Q ss_pred CcceEEEEEeccCCCchhhhhcCC------------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGP------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD 621 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld 621 (769)
.++|||||++|+|.++++.. ...++|.++.+|+.|||+||+|||++ +||||||||+|||++
T Consensus 90 ----~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~ 162 (299)
T 4asz_A 90 ----LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVG 162 (299)
T ss_dssp ----EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred ----EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEEC
Confidence 89999999999999999632 24699999999999999999999998 999999999999999
Q ss_pred CCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhh
Q 004195 622 ENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDL 696 (769)
Q Consensus 622 ~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~ 696 (769)
+++.+||+|||+|+....... ....++..|++||.+.+..|+.|+|||||||++|||+| |++||.+.....+...
T Consensus 163 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~ 242 (299)
T 4asz_A 163 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC 242 (299)
T ss_dssp GGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH
T ss_pred CCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 999999999999986544322 22345567899999999999999999999999999999 8999987544333222
Q ss_pred hhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 697 LQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 697 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+.... .+.....+++ ++.+++.+||+.||++||||+||++.++...+
T Consensus 243 i~~~~----------~~~~p~~~~~----~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 243 ITQGR----------VLQRPRTCPQ----EVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp HHHTC----------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHcCC----------CCCCCccchH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 22110 0112233444 48899999999999999999999888775543
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.5e-52 Score=442.97 Aligned_cols=256 Identities=20% Similarity=0.309 Sum_probs=202.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|...+.||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+...
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~--- 117 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRP--- 117 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS---
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE---
Confidence 34566788999999999999864 478999999986544445789999999999999999999999986443
Q ss_pred CcceEEEEEeccCCCchhhhhcCCC--------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccccee
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPG--------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVL 619 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 619 (769)
.+||||||++|+|.++++... .+++|.++++|+.|||+||+|||+. +||||||||+|||
T Consensus 118 ----~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NIL 190 (329)
T 4aoj_A 118 ----LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCL 190 (329)
T ss_dssp ----EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred ----EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEE
Confidence 899999999999999997432 3699999999999999999999998 9999999999999
Q ss_pred eCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHH
Q 004195 620 LDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVK 694 (769)
Q Consensus 620 ld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~ 694 (769)
+++++.+||+|||+|+....... ....++..|++||.+.+..|+.++|||||||++|||+| |+.||.+.....+.
T Consensus 191 l~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~ 270 (329)
T 4aoj_A 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI 270 (329)
T ss_dssp EETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHH
T ss_pred ECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 99999999999999976543321 22334556899999999999999999999999999999 89999765443332
Q ss_pred hhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 695 DLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 695 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
..+... ..+.....+++ ++.+|+.+||+.||++||||+||+++|+...+.+
T Consensus 271 ~~i~~g----------~~~~~p~~~~~----~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 271 DCITQG----------RELERPRACPP----EVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp HHHHHT----------CCCCCCTTCCH----HHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred HHHHcC----------CCCCCcccccH----HHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 222111 01222233444 4889999999999999999999999998776544
No 3
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.4e-52 Score=444.03 Aligned_cols=255 Identities=17% Similarity=0.296 Sum_probs=212.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
+.|+..+.||+|+||+||+|+.. +|+.||||+++.......+.+.+|+++|++++|||||+++++|.+.+ .+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~-------~~ 146 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-------EL 146 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETT-------EE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC-------EE
Confidence 45888899999999999999976 79999999998776666778999999999999999999999998744 48
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
|||||||++|+|.+++.+. .+++.++..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+...
T Consensus 147 ~ivmEy~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 221 (346)
T 4fih_A 147 WVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 221 (346)
T ss_dssp EEEECCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecC
Confidence 9999999999999999754 589999999999999999999999 99999999999999999999999999997654
Q ss_pred ccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 639 ARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 639 ~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
... ..+.+++..|++||.+.+..|+.++||||+||++|||+||++||.+.........+...... .....
T Consensus 222 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~--------~~~~~ 293 (346)
T 4fih_A 222 KEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP--------RLKNL 293 (346)
T ss_dssp SSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCC--------CCSCG
T ss_pred CCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC--------CCCcc
Confidence 332 23445677889999998889999999999999999999999999765443332222211110 00111
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
..++ .++.+|+.+||+.||++|||++|+++|+||.+..
T Consensus 294 ~~~s----~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~ 331 (346)
T 4fih_A 294 HKVS----PSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 331 (346)
T ss_dssp GGSC----HHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred ccCC----HHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCC
Confidence 1233 3489999999999999999999999999998643
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=6.4e-52 Score=435.69 Aligned_cols=249 Identities=20% Similarity=0.288 Sum_probs=202.0
Q ss_pred CCCcCccccCCceeEEEEEeC------CCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 482 FDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
+...+.||+|+||+||+|++. +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+.+.
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~---- 103 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP---- 103 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS----
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCE----
Confidence 344678999999999999863 46789999997543 2345789999999999999999999999986443
Q ss_pred cceEEEEEeccCCCchhhhhcCC---------------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccccee
Q 004195 555 ISIIYLIFEYAPNETLRSFISGP---------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVL 619 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 619 (769)
.++|||||++|||.++|... ...++|.++.+|+.|||+||+|||+. +||||||||+|||
T Consensus 104 ---~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NIL 177 (308)
T 4gt4_A 104 ---LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVL 177 (308)
T ss_dssp ---CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred ---EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceE
Confidence 79999999999999999632 13589999999999999999999998 9999999999999
Q ss_pred eCCCceeeecCCCCchhhhccC----CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHH
Q 004195 620 LDENFHVKINSYNLPLLAEARG----KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVK 694 (769)
Q Consensus 620 ld~~~~~kl~DFGla~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~ 694 (769)
+++++++||+|||+|+...... .....++..|++||.+....|+.++|||||||++|||+| |++||.+.....+.
T Consensus 178 l~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~ 257 (308)
T 4gt4_A 178 VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV 257 (308)
T ss_dssp ECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHH
T ss_pred ECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 9999999999999997654332 223345567899999999999999999999999999999 89999875544333
Q ss_pred hhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHh
Q 004195 695 DLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQF 754 (769)
Q Consensus 695 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~ 754 (769)
..+.... .+.....+++ .+.+++.+||+.||++||||+||+++|+.
T Consensus 258 ~~i~~~~----------~~~~p~~~~~----~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 258 EMIRNRQ----------VLPCPDDCPA----WVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp HHHHTTC----------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHHHcCC----------CCCCcccchH----HHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 3222110 0112233444 48899999999999999999999999874
No 5
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.1e-52 Score=432.04 Aligned_cols=256 Identities=20% Similarity=0.239 Sum_probs=202.3
Q ss_pred CCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 483 DSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 483 ~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
...+.||+|+||+||+|+.. ++..||||++...... ..+.|.+|++++++++|||||+++++|.+... ....+|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~---~~~~~~ 105 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK---GKKCIV 105 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEET---TEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccC---CCcEEE
Confidence 34567999999999999976 6899999999755322 23578999999999999999999999875322 134589
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC-CCceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD-ENFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~kl~DFGla~~~~ 638 (769)
+|||||++|+|.+++.+.+ .+++..+..|+.||++||+|||++ .++||||||||+|||++ +++.+||+|||+|+...
T Consensus 106 lvmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 106 LVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 9999999999999998544 699999999999999999999997 22399999999999997 47999999999998765
Q ss_pred ccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCch-hHHHHhhhhhccccccccccccCccccC
Q 004195 639 ARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENV-VVLVKDLLQVNIGTDEARKSIVDPAVMN 717 (769)
Q Consensus 639 ~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 717 (769)
.....+..++..|++||.+. ..|+.++|||||||++|||+||++||.+.. ...+...+.... ..+....
T Consensus 184 ~~~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~---------~~~~~~~ 253 (290)
T 3fpq_A 184 ASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV---------KPASFDK 253 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTC---------CCGGGGG
T ss_pred CCccCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCC---------CCCCCCc
Confidence 44444556677889999875 579999999999999999999999996532 222222111110 0111122
Q ss_pred CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 718 ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 718 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..++ ++.+++.+||+.||++|||++|+++|+||.++
T Consensus 254 ~~~~----~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~~ 289 (290)
T 3fpq_A 254 VAIP----EVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp CCCH----HHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred cCCH----HHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence 2333 38899999999999999999999999999754
No 6
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-51 Score=431.71 Aligned_cols=255 Identities=20% Similarity=0.301 Sum_probs=200.1
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||+||+|++++ .||||+++...... .+.|.+|++++++++|||||+++|+|.++ .
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~--------~ 105 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD--------N 105 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--------S
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC--------e
Confidence 356677899999999999999753 59999997543322 35799999999999999999999998642 2
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.+||||||++|+|.++++.....++|.++.+|+.|||+||+|||+. +||||||||+|||+++++++||+|||+|+..
T Consensus 106 ~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 182 (307)
T 3omv_A 106 LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-
T ss_pred EEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceec
Confidence 6999999999999999986666799999999999999999999998 9999999999999999999999999999765
Q ss_pred hccC----CcceeecCCCcchhhhcc---CCCCCCCCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhcccccccccc
Q 004195 638 EARG----KGSAEVSSPAKKTSVLAR---TEQDDKSDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 638 ~~~~----~~~~~~~~~~~~pe~~~~---~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~ 709 (769)
.... .....++..|++||.+.+ ..|+.|+|||||||++|||+||++||.+... ..+...+......+ .
T Consensus 183 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p-~--- 258 (307)
T 3omv_A 183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASP-D--- 258 (307)
T ss_dssp -----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCC-C---
T ss_pred ccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCC-C---
Confidence 4321 223456678899998853 3589999999999999999999999975432 22222222111100 0
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
-+.....++ ..+.+++.+||+.||++||||.||+++++....
T Consensus 259 --~~~~~~~~~----~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 259 --LSKLYKNCP----KAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp --STTSCTTSC----HHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred --cccccccch----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 011222334 448899999999999999999999999987643
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3e-52 Score=442.21 Aligned_cols=255 Identities=17% Similarity=0.264 Sum_probs=205.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|+||+||+|+.. +|+.||||+++...... .+.+.+|++++++++|||||++++++.+.+
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~------- 96 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENG------- 96 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-------
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC-------
Confidence 57999999999999999999975 79999999997654322 357899999999999999999999998743
Q ss_pred eEEEEEeccCCCchhhhhc-CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 557 IIYLIFEYAPNETLRSFIS-GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
.+|||||||++|+|.+++. +.+..+++.++..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+
T Consensus 97 ~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~ 173 (350)
T 4b9d_A 97 SLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIAR 173 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEES
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccce
Confidence 4899999999999999997 3344689999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-HhhhhhccccccccccccC
Q 004195 636 LAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 636 ~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~d 712 (769)
...... .....++..|++||.+.+..|+.++||||+||++|||+||++||........ ..+.....
T Consensus 174 ~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~----------- 242 (350)
T 4b9d_A 174 VLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF----------- 242 (350)
T ss_dssp CCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-----------
T ss_pred eecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-----------
Confidence 654322 2234567788999999999999999999999999999999999986543322 22222110
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
+.....+++ ++.+|+.+||+.||++|||++|+++|+|+.+..+
T Consensus 243 ~~~~~~~s~----~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~~ 285 (350)
T 4b9d_A 243 PPVSLHYSY----DLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIE 285 (350)
T ss_dssp CCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTTGG
T ss_pred CCCCccCCH----HHHHHHHHHccCChhHCcCHHHHhcCHHhhcCCC
Confidence 112223344 4899999999999999999999999999976543
No 8
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3e-51 Score=444.51 Aligned_cols=254 Identities=17% Similarity=0.306 Sum_probs=213.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
+.|+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+++|++++|||||+++++|.+.+ .+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~-------~~ 223 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-------EL 223 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETT-------EE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECC-------EE
Confidence 56888999999999999999976 79999999998776666778999999999999999999999998744 48
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
|||||||++|+|.++++.. .+++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+...
T Consensus 224 ~iVmEy~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~ 298 (423)
T 4fie_A 224 WVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 298 (423)
T ss_dssp EEEEECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeCCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECC
Confidence 9999999999999999754 589999999999999999999999 99999999999999999999999999997654
Q ss_pred cc--CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 639 AR--GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 639 ~~--~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
.. .....+++..|++||.+.+..|+.++|||||||++|||++|++||.+.........+...... .....
T Consensus 299 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~--------~~~~~ 370 (423)
T 4fie_A 299 KEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP--------RLKNL 370 (423)
T ss_dssp SSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC--------CCSCT
T ss_pred CCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC--------CCccc
Confidence 33 234456778899999999999999999999999999999999999765443332222211110 01111
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+++ ++.+|+.+||+.||++|||++|+++|+||.+.
T Consensus 371 ~~~s~----~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~ 407 (423)
T 4fie_A 371 HKVSP----SLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 407 (423)
T ss_dssp TSSCH----HHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred ccCCH----HHHHHHHHHcCCChhHCcCHHHHhcCHHhcCC
Confidence 23334 48899999999999999999999999999864
No 9
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.6e-51 Score=418.68 Aligned_cols=253 Identities=18% Similarity=0.235 Sum_probs=197.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|++++++++|||||++++++.+.+
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~------ 86 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD------ 86 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS------
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC------
Confidence 57999999999999999999975 79999999997543 233467999999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..|+||||| +|+|.+++.+.+ .+++.++..++.||+.||+|||++ +|+||||||+|||+++++++||+|||+|+
T Consensus 87 -~~~ivmEy~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~ 160 (275)
T 3hyh_A 87 -EIIMVIEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN 160 (275)
T ss_dssp -EEEEEEECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-
T ss_pred -EEEEEEeCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCe
Confidence 489999999 689999997554 699999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccC-CcceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LAEARG-KGSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~-~~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
...... ..+..++..|++||.+.+..| +.++||||+||++|||+||++||.+.........+... .+
T Consensus 161 ~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~-----------~~ 229 (275)
T 3hyh_A 161 IMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG-----------VY 229 (275)
T ss_dssp --------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-----------CC
T ss_pred ecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC-----------CC
Confidence 664433 234566778899999987776 57999999999999999999999875543322222111 01
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
.+....++ ++.+++.+||+.||++|||++|+++|+||....+
T Consensus 230 ~~p~~~s~----~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~~p 271 (275)
T 3hyh_A 230 TLPKFLSP----GAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLP 271 (275)
T ss_dssp CCCTTSCH----HHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTTCC
T ss_pred CCCCCCCH----HHHHHHHHHccCChhHCcCHHHHHcCcccccCCC
Confidence 11122333 4889999999999999999999999999976543
No 10
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.3e-51 Score=427.02 Aligned_cols=250 Identities=18% Similarity=0.267 Sum_probs=209.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||+||+|+.. +|+.||||++.+. .....+.+.+|+++|++++|||||++++++.+.+
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~------ 105 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE------ 105 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS------
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC------
Confidence 56999999999999999999975 7999999999753 2344577999999999999999999999998744
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
.+|+|||||++|+|.+++.+.+ .+++.+...|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+
T Consensus 106 -~~yivmEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~ 180 (311)
T 4aw0_A 106 -KLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAK 180 (311)
T ss_dssp -EEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred -EEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCce
Confidence 4899999999999999998554 699999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccC----CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-Hhhhhhccccccccccc
Q 004195 636 LAEARG----KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSI 710 (769)
Q Consensus 636 ~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~ 710 (769)
...... ..+.+++..|++||.+.+..|+.++||||+||++|||+||++||.......+ ..+....
T Consensus 181 ~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~---------- 250 (311)
T 4aw0_A 181 VLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE---------- 250 (311)
T ss_dssp ECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC----------
T ss_pred ecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC----------
Confidence 654322 2334567788999999999999999999999999999999999976543332 2222211
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHH------HHHHhHhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVED------TLWNLQFAT 756 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e------vl~~l~~~~ 756 (769)
+.+....++ ++.+|+.+||+.||++|||++| |++|+||..
T Consensus 251 --~~~p~~~s~----~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~ 296 (311)
T 4aw0_A 251 --YDFPEKFFP----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 296 (311)
T ss_dssp --CCCCTTCCH----HHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTT
T ss_pred --CCCCcccCH----HHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCC
Confidence 111223343 4889999999999999999987 588999865
No 11
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.1e-50 Score=426.23 Aligned_cols=249 Identities=14% Similarity=0.167 Sum_probs=200.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
+.|...+.||+|+||+||+|+.. +|+.||||+++.... ..+|+.++++++|||||++++++.+.+ .+
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~-------~~ 125 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGP-------WV 125 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETT-------EE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECC-------EE
Confidence 45777889999999999999976 799999999975422 347999999999999999999998643 48
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc-eeeecCCCCchhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF-HVKINSYNLPLLA 637 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~kl~DFGla~~~ 637 (769)
|||||||++|+|.+++++.+ .+++.++..|+.||+.||+|||++ +||||||||+|||++.++ ++||+|||+|+..
T Consensus 126 ~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~ 201 (336)
T 4g3f_A 126 NIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL 201 (336)
T ss_dssp EEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC
T ss_pred EEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEc
Confidence 99999999999999998554 699999999999999999999999 999999999999999988 5999999999765
Q ss_pred hccCC-------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 638 EARGK-------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 638 ~~~~~-------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
..... ....++..|++||.+.+..|+.++|||||||++|||+||++||.+.....+...+... ....
T Consensus 202 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~---~~~~--- 275 (336)
T 4g3f_A 202 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE---PPPI--- 275 (336)
T ss_dssp ------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS---CCGG---
T ss_pred cCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC---CCCc---
Confidence 43221 1234667789999999999999999999999999999999999764322211111110 0000
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
+.+...+++ .+.+++.+||+.||++|||+.|++++++.+.
T Consensus 276 --~~~~~~~s~----~~~~li~~~L~~dP~~R~sa~el~~~l~~~l 315 (336)
T 4g3f_A 276 --REIPPSCAP----LTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315 (336)
T ss_dssp --GGSCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --hhcCccCCH----HHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 112223343 4889999999999999999999999987654
No 12
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.1e-50 Score=423.29 Aligned_cols=251 Identities=17% Similarity=0.192 Sum_probs=200.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC----CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT----DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|+..+.||+|+||+||+|+.. +++.||||+++.... .....+.+|++++++++|||||++++++.+.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~---- 99 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG---- 99 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETT----
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC----
Confidence 46889999999999999999852 478999999975421 22346889999999999999999999998743
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
.+|+|||||++|+|.+++.+.+ .+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+
T Consensus 100 ---~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGl 172 (304)
T 3ubd_A 100 ---KLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGL 172 (304)
T ss_dssp ---EEEEEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEE
T ss_pred ---EEEEEEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccccc
Confidence 4899999999999999998654 699999999999999999999999 999999999999999999999999999
Q ss_pred chhhhcc--CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 634 PLLAEAR--GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 634 a~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
|+..... ...+..++..|++||.+.+..|+.++||||+||++|||+||++||.+.........+...
T Consensus 173 a~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~----------- 241 (304)
T 3ubd_A 173 SKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA----------- 241 (304)
T ss_dssp EEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------
T ss_pred ceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC-----------
Confidence 9754332 223445677889999999999999999999999999999999999865543322222110
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
.+.+....++ ++.+++.+||+.||++||| ++|+++|+||..
T Consensus 242 ~~~~p~~~s~----~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~ 287 (304)
T 3ubd_A 242 KLGMPQFLSP----EAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFST 287 (304)
T ss_dssp CCCCCTTSCH----HHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTT
T ss_pred CCCCCCcCCH----HHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccC
Confidence 0111123333 4889999999999999998 589999999975
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.2e-50 Score=423.85 Aligned_cols=275 Identities=19% Similarity=0.265 Sum_probs=199.2
Q ss_pred CCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+|...+.||+|+||+||+|++ +|+.||||+++.... ....+++|+..+.+++|||||+++|+|.+.+. ....++|
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~---~~~~~~l 78 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNG---TWTQLWL 78 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS---SSEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCC---CceEEEE
Confidence 456678999999999999998 589999999974321 11223456666678899999999999986432 2235899
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCC-----CCCccccCccccceeeCCCceeeecCCCCch
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI-----VPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
|||||++|+|.+++++. .++|..+.+++.|+++||+|||+++ .++||||||||+|||+|.++++||+|||+|+
T Consensus 79 V~Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~ 156 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EecCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence 99999999999999854 5899999999999999999999863 5689999999999999999999999999997
Q ss_pred hhhccCC------cceeecCCCcchhhhccC------CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH--Hhhhhhcc
Q 004195 636 LAEARGK------GSAEVSSPAKKTSVLART------EQDDKSDVYDIGIILIEIIVGRPITSENVVVLV--KDLLQVNI 701 (769)
Q Consensus 636 ~~~~~~~------~~~~~~~~~~~pe~~~~~------~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~--~~~~~~~~ 701 (769)
....... ....++..|++||.+.+. .++.|+|||||||++|||+||++|+........ ........
T Consensus 157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3hmm_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence 6543221 123456678999988653 367899999999999999999887643211000 00000000
Q ss_pred cccc----ccccccCccccCCC-CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcccc
Q 004195 702 GTDE----ARKSIVDPAVMNEC-SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLK 762 (769)
Q Consensus 702 ~~~~----~~~~~~d~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~~ 762 (769)
.... ......+|.+.... +.+....+.+++.+||+.||++||||.||++.|....+.++.+
T Consensus 237 ~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~ik 302 (303)
T 3hmm_A 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGIK 302 (303)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC----
T ss_pred hHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcCCC
Confidence 0000 00111233332221 2345677899999999999999999999999998876655543
No 14
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=5.7e-49 Score=420.51 Aligned_cols=257 Identities=20% Similarity=0.258 Sum_probs=204.7
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccC-CceeeEeeeeeccC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRH-SNLVSALGHCLDFS 549 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H-~nIv~l~~~~~~~~ 549 (769)
..++|+..+.||+|+||+||+|++. .++.||||+++..... ..++|.+|+++|.+++| ||||+++|+|.+.+
T Consensus 62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 3467888999999999999999854 2468999999754322 23579999999999965 99999999997532
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCC---------------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcc
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGP---------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLK 614 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlK 614 (769)
. .+++|||||++|+|.++|+.. ...++|.++..|+.|||+||+|||++ +|||||||
T Consensus 142 ~------~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK 212 (353)
T 4ase_A 142 G------PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLA 212 (353)
T ss_dssp S------CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred C------EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccC
Confidence 2 279999999999999999632 23589999999999999999999999 99999999
Q ss_pred ccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCch
Q 004195 615 ITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENV 689 (769)
Q Consensus 615 p~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~ 689 (769)
|+|||+++++.+||+|||+|+....... ....++..|++||.+.+..|+.++|||||||++|||+| |++||.+..
T Consensus 213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~ 292 (353)
T 4ase_A 213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 292 (353)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred ccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999986543322 23345567899999999999999999999999999998 899997643
Q ss_pred -hHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 690 -VVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 690 -~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...+...+... ..+.....+++ ++.+++.+||+.||++|||+.||++||...-+
T Consensus 293 ~~~~~~~~i~~g----------~~~~~p~~~~~----~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 293 IDEEFCRRLKEG----------TRMRAPDYTTP----EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp CSHHHHHHHHHT----------CCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC----------CCCCCCccCCH----HHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 22222222211 11222233444 48899999999999999999999999976543
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.1e-48 Score=407.90 Aligned_cols=258 Identities=17% Similarity=0.309 Sum_probs=193.6
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC-----
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD----- 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~----- 552 (769)
++|+..+.||+|+||+||+|+.. +|+.||||+++..... ..+.+.+|+++|++++|||||++++++.+.+...
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46888999999999999999976 7999999999754322 2357899999999999999999999987644211
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCC--CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecC
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPG--YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINS 630 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~D 630 (769)
......|+|||||++|+|.+++.... ...++..++.|+.||++||+|||++ +||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence 12335799999999999999998543 2356777899999999999999999 999999999999999999999999
Q ss_pred CCCchhhhccCC--------------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhh
Q 004195 631 YNLPLLAEARGK--------------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDL 696 (769)
Q Consensus 631 FGla~~~~~~~~--------------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~ 696 (769)
||+|+....... ....++..|++||.+.+..|+.++|||||||++|||++ ||..... ....+
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~-~~~~~ 237 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME-RVRTL 237 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH-HHHHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH-HHHHH
Confidence 999976543221 12346778899999999999999999999999999997 6654321 11111
Q ss_pred hhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 697 LQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 697 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.... ...-|.. .........+++.+||+.||++|||+.|+++|+|+..
T Consensus 238 ~~~~--------~~~~p~~----~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~ 285 (299)
T 4g31_A 238 TDVR--------NLKFPPL----FTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFED 285 (299)
T ss_dssp HHHH--------TTCCCHH----HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCC
T ss_pred HHHh--------cCCCCCC----CcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCC
Confidence 1100 0000111 1122334678999999999999999999999999864
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.9e-47 Score=410.66 Aligned_cols=272 Identities=15% Similarity=0.224 Sum_probs=206.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|+||+||+|+.. +|+.||||+++..... ..+.+.+|+++|++++|||||++++++.....- ....
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~-~~~~ 132 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY-GEFK 132 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCT-TTCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccccc-ccCC
Confidence 57899999999999999999975 7999999999754322 235688999999999999999999998753211 1234
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.+|+|||||+ |+|.+++.+.+ .+++..+..|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeee
Confidence 5899999996 78999998654 799999999999999999999999 999999999999999999999999999975
Q ss_pred hhcc------CCcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhcccccccc-
Q 004195 637 AEAR------GKGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEAR- 707 (769)
Q Consensus 637 ~~~~------~~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~- 707 (769)
.... ...+..++..|++||.+.+. .|+.++||||+|||+|||+||++||.+..... ...+...........
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~ 287 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 287 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGT
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHh
Confidence 4321 12334567788899987765 56999999999999999999999997654332 222222111111100
Q ss_pred ccc-----------cCcccc---CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 708 KSI-----------VDPAVM---NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 708 ~~~-----------~d~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+ +.+... ....+....++.+|+.+||+.||++|||++|+++|+||.+.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 351 (398)
T 4b99_A 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY 351 (398)
T ss_dssp C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTT
T ss_pred hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcC
Confidence 000 000000 00001123458899999999999999999999999999754
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2e-46 Score=403.64 Aligned_cols=266 Identities=14% Similarity=0.241 Sum_probs=200.5
Q ss_pred HHHHHhcCCCCcCccccCCceeEEEEEeC----CCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeecc
Q 004195 474 ELKEATDCFDSSSFMCDASHGQIYKGKLT----DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDF 548 (769)
Q Consensus 474 el~~~t~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~ 548 (769)
++.+..+.|+..+.||+|+||+||+|+.+ +++.||||++... .....+.+|+++++++ +|||||++++++.+.
T Consensus 15 ~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~ 92 (361)
T 4f9c_A 15 AVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKN 92 (361)
T ss_dssp HSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred hcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence 34456788999999999999999999853 4789999998643 3456789999999998 699999999999864
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC-ceee
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN-FHVK 627 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~k 627 (769)
+ ++|+|||||++|+|.+++. .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+|
T Consensus 93 ~-------~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~k 158 (361)
T 4f9c_A 93 D-------HVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYA 158 (361)
T ss_dssp T-------EEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEE
T ss_pred C-------EEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEE
Confidence 3 4899999999999999995 489999999999999999999999 99999999999999876 8999
Q ss_pred ecCCCCchhhhccC------------------------------CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHH
Q 004195 628 INSYNLPLLAEARG------------------------------KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILI 676 (769)
Q Consensus 628 l~DFGla~~~~~~~------------------------------~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~ 676 (769)
|+|||+|+...... ....+++..|++||.+.+. .|+.++||||+|||+|
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ 238 (361)
T 4f9c_A 159 LVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFL 238 (361)
T ss_dssp ECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHH
T ss_pred ECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHH
Confidence 99999996432211 1122456678899988765 5899999999999999
Q ss_pred HHHhCCCCCCCch--hHHHHhhhhhcccccc---------------------cccc---------ccCcccc--------
Q 004195 677 EIIVGRPITSENV--VVLVKDLLQVNIGTDE---------------------ARKS---------IVDPAVM-------- 716 (769)
Q Consensus 677 elltG~~p~~~~~--~~~~~~~~~~~~~~~~---------------------~~~~---------~~d~~~~-------- 716 (769)
||+||++||.... .+....+... .+..+ .... ...|...
T Consensus 239 ell~G~~Pf~~~~~~~~~l~~I~~~-~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 317 (361)
T 4f9c_A 239 SLLSGRYPFYKASDDLTALAQIMTI-RGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHAT 317 (361)
T ss_dssp HHHHTCSSSSCCSSHHHHHHHHHHH-HCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC------------------
T ss_pred HHHHCCCCCCCCCCHHHHHHHHHHh-cCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccc
Confidence 9999999885432 1122111110 00000 0000 0000000
Q ss_pred -CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 717 -NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 717 -~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+.....+.++.+|+.+||+.||++|||++|+++|+||..
T Consensus 318 ~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~ 358 (361)
T 4f9c_A 318 NLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD 358 (361)
T ss_dssp ----CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred cccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence 0001112345889999999999999999999999999964
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=4.7e-46 Score=421.14 Aligned_cols=255 Identities=16% Similarity=0.214 Sum_probs=206.1
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHH---HHHHhhccCCceeeEeeeeeccCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYH---IELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~E---i~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
.++|+..+.||+|+||.||+|+.. +|+.||||++++.. ......+.+| +.+++.++|||||++++++.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~-- 265 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-- 265 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--
Confidence 367999999999999999999976 79999999997532 2333334444 56677789999999999998744
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCC
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
.+|+|||||+||+|.+++.+.+ .+++..+..|+.||+.||+|||++ +||||||||+|||+|.+|++||+||
T Consensus 266 -----~lylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DF 336 (689)
T 3v5w_A 266 -----KLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDL 336 (689)
T ss_dssp -----EEEEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred -----EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEeccc
Confidence 4999999999999999998654 699999999999999999999999 9999999999999999999999999
Q ss_pred CCchhhhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 632 NLPLLAEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 632 Gla~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
|+|+........+.+++..|++||++.+ ..|+.++||||+||++|||+||++||.+........+.......
T Consensus 337 GlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~------- 409 (689)
T 3v5w_A 337 GLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM------- 409 (689)
T ss_dssp TTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC-------
T ss_pred ceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC-------
Confidence 9998766555556677888899999864 57999999999999999999999999754322111111111110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
.+.+...+++ ++.+|+.+||+.||++|++ ++||++|+||..
T Consensus 410 -~~~~p~~~S~----~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~ 455 (689)
T 3v5w_A 410 -AVELPDSFSP----ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455 (689)
T ss_dssp -CCCCCTTSCH----HHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTT
T ss_pred -CCCCCccCCH----HHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccC
Confidence 1112223333 4899999999999999998 799999999964
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.1e-45 Score=418.19 Aligned_cols=256 Identities=14% Similarity=0.188 Sum_probs=211.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|+..+.||+|+||.||+|+.+ +|+.||||++........+.+.+|+++|++++|||||++++++.+.. .
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-------~ 228 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN-------E 228 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS-------E
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC-------E
Confidence 468999999999999999999976 79999999997654444567899999999999999999999998643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC--ceeeecCCCCch
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN--FHVKINSYNLPL 635 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~--~~~kl~DFGla~ 635 (769)
+|+|||||++|+|.+++......+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+
T Consensus 229 ~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~ 305 (573)
T 3uto_A 229 MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTA 305 (573)
T ss_dssp EEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCE
T ss_pred EEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeecccee
Confidence 8999999999999999976555799999999999999999999999 99999999999999854 899999999997
Q ss_pred hhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHH-hhhhhccccccccccccCc
Q 004195 636 LAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVK-DLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~ 713 (769)
....... ...+++..|++||.+.+..|+.++||||+||++|||++|++||.+....... .+...... +++
T Consensus 306 ~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~--------~~~ 377 (573)
T 3uto_A 306 HLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN--------MDD 377 (573)
T ss_dssp ECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--------CCS
T ss_pred EccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCC--------CCc
Confidence 7654332 2334566788999999999999999999999999999999999865543322 22221111 111
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
......++ ++.+|+.+||+.||++|||+.|+++|+||..
T Consensus 378 ~~~~~~s~----~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~ 416 (573)
T 3uto_A 378 SAFSGISE----DGKDFIRKLLLADPNTRMTIHQALEHPWLTP 416 (573)
T ss_dssp GGGTTSCH----HHHHHHHTTSCSSGGGSCCHHHHHHSTTTSC
T ss_pred ccccCCCH----HHHHHHHHHccCChhHCcCHHHHhcCcCcCC
Confidence 11223343 4889999999999999999999999999874
No 20
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=5.3e-44 Score=382.53 Aligned_cols=284 Identities=24% Similarity=0.475 Sum_probs=231.5
Q ss_pred CccccCHHHHHHHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeee
Q 004195 466 AYRTFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGH 544 (769)
Q Consensus 466 ~~~~~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~ 544 (769)
..+.|+++++..++++|+..+.||+|+||.||+|+..+|+.||||++..... .....+.+|++++++++||||++++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 3457899999999999999999999999999999988899999999986532 233478999999999999999999999
Q ss_pred eeccCCCCCCcceEEEEEeccCCCchhhhhcCC---CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC
Q 004195 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFISGP---GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD 621 (769)
Q Consensus 545 ~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld 621 (769)
|.+... .++||||+++|+|.+++... ...++|..+..++.|++.||+|||+.+.++|+||||||+||+++
T Consensus 96 ~~~~~~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~ 168 (326)
T 3uim_A 96 CMTPTE-------RLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 168 (326)
T ss_dssp ECCSSC-------CEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC
T ss_pred EecCCc-------eEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC
Confidence 986443 68999999999999999743 23599999999999999999999998788999999999999999
Q ss_pred CCceeeecCCCCchhhhccCCc---ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCch-----hHHH
Q 004195 622 ENFHVKINSYNLPLLAEARGKG---SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENV-----VVLV 693 (769)
Q Consensus 622 ~~~~~kl~DFGla~~~~~~~~~---~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~-----~~~~ 693 (769)
.++.+||+|||+++........ ...++..|++||.+.+..++.++|||||||++|||+||++||.... ....
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 248 (326)
T 3uim_A 169 EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248 (326)
T ss_dssp TTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBH
T ss_pred CCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhH
Confidence 9999999999999765432221 1224556788999888889999999999999999999999996321 1111
Q ss_pred HhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 694 KDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..++.. ...........++......+.+....+.+++.+||+.||++|||+.||+++++....
T Consensus 249 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~ 311 (326)
T 3uim_A 249 LDWVKG-LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 311 (326)
T ss_dssp HHHHTT-TTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred HHHHHH-HhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence 122211 112233455566666677888889999999999999999999999999999986543
No 21
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=6.3e-44 Score=381.07 Aligned_cols=281 Identities=27% Similarity=0.507 Sum_probs=228.7
Q ss_pred ccCHHHHHHHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeecc
Q 004195 469 TFTLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548 (769)
Q Consensus 469 ~~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~ 548 (769)
.+++.++..++++|+..+.||+|+||.||+|+.++|+.||||++........+.+.+|++++++++||||++++++|.+.
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 34555677789999999999999999999999888999999998866555567899999999999999999999999764
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcCCC---CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISGPG---YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH 625 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~ 625 (769)
+. .++||||+++|+|.+++.... ..++|..+..++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 108 ~~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~ 177 (321)
T 2qkw_B 108 NE-------MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFV 177 (321)
T ss_dssp TC-------CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCC
T ss_pred Ce-------EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCC
Confidence 33 799999999999999997432 3589999999999999999999998 9999999999999999999
Q ss_pred eeecCCCCchhhhccC----CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH---Hhhhh
Q 004195 626 VKINSYNLPLLAEARG----KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV---KDLLQ 698 (769)
Q Consensus 626 ~kl~DFGla~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~---~~~~~ 698 (769)
+||+|||+++...... .....++..|++||.+.+..++.++|||||||++|||+||+.||........ ..+..
T Consensus 178 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~ 257 (321)
T 2qkw_B 178 PKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257 (321)
T ss_dssp EEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTH
T ss_pred EEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhh
Confidence 9999999986543221 1223356678899998888999999999999999999999999865322111 11111
Q ss_pred hccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 699 VNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 699 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
. ..........+++.......++....+.+++.+||+.||++|||+.|++++++.+.+.++
T Consensus 258 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~ 318 (321)
T 2qkw_B 258 E-SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318 (321)
T ss_dssp H-HHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSC
T ss_pred h-ccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhccc
Confidence 0 011223445566666667788889999999999999999999999999999998866543
No 22
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.2e-42 Score=371.03 Aligned_cols=263 Identities=19% Similarity=0.294 Sum_probs=215.7
Q ss_pred ccCHHHHHHHhcC----------CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCc
Q 004195 469 TFTLDELKEATDC----------FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSN 537 (769)
Q Consensus 469 ~~~~~el~~~t~~----------f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~n 537 (769)
.++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 5788898888875 666779999999999999976 79999999998766666778999999999999999
Q ss_pred eeeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccc
Q 004195 538 LVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITD 617 (769)
Q Consensus 538 Iv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~N 617 (769)
|++++++|...+ ..++||||+++|+|.+++... .+++..+..++.|+++||+|||+. +|+||||||+|
T Consensus 104 iv~~~~~~~~~~-------~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~N 171 (321)
T 2c30_A 104 VVEMYKSYLVGE-------ELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDS 171 (321)
T ss_dssp BCCEEEEEEETT-------EEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred cceEEEEEEECC-------EEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence 999999998643 389999999999999998754 589999999999999999999998 99999999999
Q ss_pred eeeCCCceeeecCCCCchhhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHh
Q 004195 618 VLLDENFHVKINSYNLPLLAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKD 695 (769)
Q Consensus 618 ILld~~~~~kl~DFGla~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~ 695 (769)
|+++.++.+||+|||++....... .....++..|++||...+..++.++|||||||++|||+||++||..........
T Consensus 172 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~ 251 (321)
T 2c30_A 172 ILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK 251 (321)
T ss_dssp EEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred EEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 999999999999999986553322 122344566788999988889999999999999999999999997654332222
Q ss_pred hhhhccccccccccccCccc--cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 696 LLQVNIGTDEARKSIVDPAV--MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 696 ~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+... ..+.. ....+ ..+.+++.+||+.||++|||++|+++|+|+...
T Consensus 252 ~~~~~----------~~~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 301 (321)
T 2c30_A 252 RLRDS----------PPPKLKNSHKVS----PVLRDFLERMLVRDPQERATAQELLDHPFLLQT 301 (321)
T ss_dssp HHHHS----------SCCCCTTGGGSC----HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred HHhcC----------CCCCcCccccCC----HHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence 11111 01111 11223 348899999999999999999999999999754
No 23
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=9.3e-43 Score=367.57 Aligned_cols=255 Identities=18% Similarity=0.263 Sum_probs=208.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|...+.||+|+||+||+|+.. +|+.||||++........+.+.+|+.++++++||||+++++++.+.+ .
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-------~ 91 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-------E 91 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-------E
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECC-------E
Confidence 457899999999999999999964 79999999998776666788999999999999999999999998643 3
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 92 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (297)
T 3fxz_A 92 LWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI 166 (297)
T ss_dssp EEEEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 89999999999999999754 589999999999999999999999 9999999999999999999999999998655
Q ss_pred hccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 638 EARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 638 ~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
..... ....++..|++||.+.+..++.++|||||||++|||+||+.||...........+..... .. ...
T Consensus 167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~-----~~---~~~ 238 (297)
T 3fxz_A 167 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-----PE---LQN 238 (297)
T ss_dssp CSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCS-----CC---CSC
T ss_pred CCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----CC---CCC
Confidence 43222 223445667889999889999999999999999999999999976543222111111000 00 011
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
....+ ..+.+++.+||+.||++|||++|+++|+|+...
T Consensus 239 ~~~~~----~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 276 (297)
T 3fxz_A 239 PEKLS----AIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIA 276 (297)
T ss_dssp GGGSC----HHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred ccccC----HHHHHHHHHHccCChhHCcCHHHHhhChhhccc
Confidence 11223 348899999999999999999999999998754
No 24
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-42 Score=371.22 Aligned_cols=255 Identities=18% Similarity=0.240 Sum_probs=202.1
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
..++|+..+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~------ 81 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETAN------ 81 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSS------
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC------
Confidence 3567889999999999999999965 799999999976532 23457899999999999999999999997643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.
T Consensus 82 -~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~ 156 (347)
T 3zgw_A 82 -KIFMVLEYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCA 156 (347)
T ss_dssp -EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred -EEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcc
Confidence 4899999999999999997544 689999999999999999999999 99999999999999999999999999986
Q ss_pred hhhccC---CcceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 636 LAEARG---KGSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 636 ~~~~~~---~~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
...... .....++..|++||.+.+..+ +.++||||+||++|||++|+.||...........+...
T Consensus 157 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~----------- 225 (347)
T 3zgw_A 157 KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG----------- 225 (347)
T ss_dssp C--------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-----------
T ss_pred cccCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC-----------
Confidence 543322 123345667888999887775 89999999999999999999999875543332222110
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
........++ .+.+++.+||+.||++|||++|+++|+|+....
T Consensus 226 ~~~~p~~~s~----~~~~li~~~L~~dP~~Rps~~eil~hp~~~~~~ 268 (347)
T 3zgw_A 226 KYDVPKWLSP----SSILLLQQMLQVDPKKRISMKNLLNHPWIMQDY 268 (347)
T ss_dssp CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHTCHHHHTTT
T ss_pred CCCCCCCCCH----HHHHHHHHHcccCHhHCcCHHHHhcCcchhcCC
Confidence 0111122333 378899999999999999999999999998653
No 25
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.1e-42 Score=369.59 Aligned_cols=253 Identities=18% Similarity=0.260 Sum_probs=206.6
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+..
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------ 87 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK------ 87 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS------
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC------
Confidence 457888999999999999999974 7999999999765322 2356889999999999999999999997643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++...+ .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 88 -~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 162 (328)
T 3fe3_A 88 -TLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSN 162 (328)
T ss_dssp -EEEEEECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCG
T ss_pred -EEEEEEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCce
Confidence 4899999999999999997544 689999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCC-cceeecCCCcchhhhccCCCC-CCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LAEARGK-GSAEVSSPAKKTSVLARTEQD-DKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~~-~~~~~~~~~~~pe~~~~~~~~-~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
....... ....++..|++||.+.+..++ .++||||+||++|||+||+.||...........+... ..
T Consensus 163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~-----------~~ 231 (328)
T 3fe3_A 163 EFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG-----------KY 231 (328)
T ss_dssp GGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------CC
T ss_pred ecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-----------CC
Confidence 6543322 223455677889998877765 7999999999999999999999876544333322111 01
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+....++ .+.+++.+||+.||++|||++|+++|+|+...
T Consensus 232 ~~p~~~s~----~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~ 271 (328)
T 3fe3_A 232 RIPFYMST----DCENLLKRFLVLNPIKRGTLEQIMKDRWINAG 271 (328)
T ss_dssp CCCTTSCH----HHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTT
T ss_pred CCCCCCCH----HHHHHHHHHCCCChhHCcCHHHHhcCHhhcCC
Confidence 11112233 48899999999999999999999999999754
No 26
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-42 Score=367.75 Aligned_cols=258 Identities=13% Similarity=0.184 Sum_probs=208.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|...+.||+|+||.||+|+.. +|+.||+|.+... ....+.+.+|++++++++||||+++++++.+.+ .
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-------~ 75 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESME-------E 75 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT-------E
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC-------E
Confidence 467888999999999999999976 6899999998743 223456889999999999999999999997643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC--CceeeecCCCCch
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE--NFHVKINSYNLPL 635 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~--~~~~kl~DFGla~ 635 (769)
.++||||+++|+|.+++......+++.++..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~ 152 (321)
T 1tki_A 76 LVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQAR 152 (321)
T ss_dssp EEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCE
T ss_pred EEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCe
Confidence 8999999999999999986655799999999999999999999999 9999999999999987 7899999999997
Q ss_pred hhhccCCc-ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-HhhhhhccccccccccccCc
Q 004195 636 LAEARGKG-SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~~~-~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~ 713 (769)
........ ...++..|++||...+..++.++|||||||++|||++|++||........ ..+...... .++
T Consensus 153 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--------~~~ 224 (321)
T 1tki_A 153 QLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT--------FDE 224 (321)
T ss_dssp ECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--------CCH
T ss_pred ECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCC--------CCh
Confidence 65433322 22344567889998887789999999999999999999999976543322 222211111 111
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
......++ ++.+++.+||+.||++|||+.|+++|+|+....+
T Consensus 225 ~~~~~~s~----~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~~ 266 (321)
T 1tki_A 225 EAFKEISI----EAMDFVDRLLVKERKSRMTASEALQHPWLKQKIE 266 (321)
T ss_dssp HHHTTSCH----HHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCGG
T ss_pred hhhccCCH----HHHHHHHHHcCCChhHCcCHHHHhcChhhccCcc
Confidence 11122333 4889999999999999999999999999976543
No 27
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.4e-41 Score=360.98 Aligned_cols=293 Identities=27% Similarity=0.364 Sum_probs=242.7
Q ss_pred cCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCC--CCCCCCcceEecC----CCeeEEEeCCCCCCCCCCCCCCCCC
Q 004195 27 QLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCN--IEPTPSLTLVCYE----DNLTQLHIAGDNNNNINGGLAHNFS 100 (769)
Q Consensus 27 ~~~~~~~~~ll~~k~~~~~~~~l~~w~~~~~~~~c~--~~~~~~~~v~C~~----~~v~~l~l~~~~~~~~~~~l~~n~~ 100 (769)
.|.++|++||++||+++.+|..+++|+.+. +||. |.| |.|.. ++|+.|+++++.+.
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~--~~C~~~w~g-----v~C~~~~~~~~l~~L~L~~~~l~----------- 63 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTT--DCCNRTWLG-----VLCDTDTQTYRVNNLDLSGLNLP----------- 63 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTS--CTTTTCSTT-----EEECCSSSCCCEEEEEEECCCCS-----------
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCC--CCCcCCCcc-----eEeCCCCCCceEEEEECCCCCcc-----------
Confidence 478899999999999998887789998765 8998 874 99964 67999988776543
Q ss_pred CC--ccccccCCCCCCcEEEeec-ccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCC
Q 004195 101 TD--TFFSTLGSLSSLKVLSLVS-LGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVP 177 (769)
Q Consensus 101 ~~--~~~~~~~~l~~L~~L~L~~-n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p 177 (769)
+ .+|..|+++++|++|+|++ |++.+.+|..|+++++|++|+|++|++++.+|..|+++++|++|+|++|.+++.+|
T Consensus 64 -~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 142 (313)
T 1ogq_A 64 -KPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLP 142 (313)
T ss_dssp -SCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCC
T ss_pred -CCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCC
Confidence 3 4567888899999999995 88888899999999999999999999988899999999999999999999988889
Q ss_pred ccCcCCcCCCEEeccCCCCcccCCccccCCC-CCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCc
Q 004195 178 SELSLLQVLSVLSLKNNSLSGFLPVSLTGLQ-SLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMV 255 (769)
Q Consensus 178 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~ 255 (769)
..|..+++|++|+|++|.+++.+|..+++++ +|++|++++|++++.+|. +..++ |+.|++++|.
T Consensus 143 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~------------- 208 (313)
T 1ogq_A 143 PSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM------------- 208 (313)
T ss_dssp GGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE-------------
T ss_pred hHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc-------------
Confidence 9999999999999999999988999998888 899999999998877775 44444 5555555554
Q ss_pred EEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCC
Q 004195 256 TLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSN 335 (769)
Q Consensus 256 ~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 335 (769)
+++.+ |..+..+++|+.|+|++|.+++.+|. +..+++|++|+|++|++++.+|..+..+++|+.|+|++|
T Consensus 209 --------l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 278 (313)
T 1ogq_A 209 --------LEGDA-SVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN 278 (313)
T ss_dssp --------EEECC-GGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSS
T ss_pred --------ccCcC-CHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCC
Confidence 44443 67778888888888888888876555 778888888999888888888888888888899999999
Q ss_pred cCCCCCCccccccCCCceEECCCCC-CCh
Q 004195 336 LLTGYLPSCLQVEAKTRLVLYSKNC-LSN 363 (769)
Q Consensus 336 ~l~g~~p~~~~~~~~l~~l~l~~N~-l~~ 363 (769)
+++|.+|.. ..+++++.+++++|. +.|
T Consensus 279 ~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 279 NLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp EEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred cccccCCCC-ccccccChHHhcCCCCccC
Confidence 988888886 667788888888885 444
No 28
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7.4e-42 Score=369.71 Aligned_cols=255 Identities=15% Similarity=0.214 Sum_probs=207.8
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC------ChhHHHHHHHHHhhccCCceeeEeeeeeccCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS------SPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~ 550 (769)
..+.|...+.||+|+||.||+|+.. +|+.||||.++..... ..+.+.+|+.++++++||||+++++++.+..
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~- 88 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT- 88 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC-
Confidence 3467889999999999999999976 6999999999765322 2467999999999999999999999997643
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc----ee
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF----HV 626 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~----~~ 626 (769)
..++||||+++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+||++++++ .+
T Consensus 89 ------~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~v 158 (361)
T 2yab_A 89 ------DVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHI 158 (361)
T ss_dssp ------EEEEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCE
T ss_pred ------EEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCE
Confidence 4899999999999999997654 799999999999999999999999 999999999999998877 79
Q ss_pred eecCCCCchhhhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-Hhhhhhccccc
Q 004195 627 KINSYNLPLLAEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTD 704 (769)
Q Consensus 627 kl~DFGla~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~ 704 (769)
||+|||+++...... .....++..|++||.+....++.++|||||||++|||++|++||........ ..+......
T Consensus 159 kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~-- 236 (361)
T 2yab_A 159 KLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD-- 236 (361)
T ss_dssp EECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--
T ss_pred EEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC--
Confidence 999999997654432 2233455668889999888899999999999999999999999976543322 222211111
Q ss_pred cccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 705 EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 705 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
+++......++ .+.+++.+||..||++|||+.|+++|+|+.
T Consensus 237 ------~~~~~~~~~s~----~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 277 (361)
T 2yab_A 237 ------FDEEFFSQTSE----LAKDFIRKLLVKETRKRLTIQEALRHPWIT 277 (361)
T ss_dssp ------CCHHHHTTSCH----HHHHHHHHHSCSSTTTSCCHHHHHTSTTTS
T ss_pred ------CCchhccCCCH----HHHHHHHHHCCCChhHCcCHHHHhcCcCcC
Confidence 11111223333 488999999999999999999999999986
No 29
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.7e-42 Score=366.49 Aligned_cols=268 Identities=18% Similarity=0.266 Sum_probs=202.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|+..+.||+|+||+||+|+..+|+.||||++....... .+.+.+|++++++++||||+++++++.+..
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~------- 92 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER------- 92 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS-------
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC-------
Confidence 46788899999999999999999889999999997543222 357889999999999999999999997643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||++ |+|.+++......+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 168 (311)
T 3niz_A 93 CLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARA 168 (311)
T ss_dssp CEEEEEECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEEcCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCcee
Confidence 3899999998 588888886666799999999999999999999999 999999999999999999999999999976
Q ss_pred hhccC--CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhcc-cccccccccc
Q 004195 637 AEARG--KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNI-GTDEARKSIV 711 (769)
Q Consensus 637 ~~~~~--~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~-~~~~~~~~~~ 711 (769)
..... .....++..|++||.+.+ ..++.++||||+||++|||+||++||...... ....+..... .....+....
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 248 (311)
T 3niz_A 169 FGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQ 248 (311)
T ss_dssp TTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGT
T ss_pred cCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhh
Confidence 54222 122334566788998765 56899999999999999999999999754322 2222111110 0011111000
Q ss_pred -------------CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 712 -------------DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 712 -------------d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+........+....++.+++.+||+.||++|||++|+++|+||...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 307 (311)
T 3niz_A 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307 (311)
T ss_dssp TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTS
T ss_pred ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccC
Confidence 0000000011122358899999999999999999999999999754
No 30
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.1e-41 Score=364.85 Aligned_cols=251 Identities=17% Similarity=0.226 Sum_probs=207.1
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+|+.. +|+.||||+++.. .....+.+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~------ 78 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD------ 78 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS------
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC------
Confidence 57888999999999999999976 6999999999754 2345567899999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++.+.+ .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 79 -~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 153 (337)
T 1o6l_A 79 -RLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153 (337)
T ss_dssp -EEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred -EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchh
Confidence 4899999999999999997543 689999999999999999999999 99999999999999999999999999987
Q ss_pred hhhc--cCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LAEA--RGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
.... .......++..|++||.+.+..++.++|||||||++|||++|++||...........+... ..
T Consensus 154 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~-----------~~ 222 (337)
T 1o6l_A 154 EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME-----------EI 222 (337)
T ss_dssp CSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------CC
T ss_pred hcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC-----------CC
Confidence 5322 1223345667788999998889999999999999999999999999765443322211110 01
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
.+....++ ++.+++.+||+.||++|| +++|+++|+||..
T Consensus 223 ~~p~~~s~----~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~ 266 (337)
T 1o6l_A 223 RFPRTLSP----EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266 (337)
T ss_dssp CCCTTSCH----HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred CCCCCCCH----HHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCC
Confidence 11122333 488999999999999999 9999999999864
No 31
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-41 Score=361.72 Aligned_cols=254 Identities=17% Similarity=0.215 Sum_probs=206.0
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC------ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS------SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
+.|...+.||+|+||.||+|+.. +|+.||||.+...... ..+.+.+|++++++++||||+++++++.+..
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--- 87 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--- 87 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS---
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC---
Confidence 46888999999999999999976 6999999999754322 3467999999999999999999999997643
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc----eeee
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF----HVKI 628 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~----~~kl 628 (769)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||
T Consensus 88 ----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl 159 (326)
T 2y0a_A 88 ----DVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKI 159 (326)
T ss_dssp ----EEEEEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEE
T ss_pred ----EEEEEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEE
Confidence 4899999999999999997554 699999999999999999999998 999999999999999887 7999
Q ss_pred cCCCCchhhhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHH-hhhhhccccccc
Q 004195 629 NSYNLPLLAEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVK-DLLQVNIGTDEA 706 (769)
Q Consensus 629 ~DFGla~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~ 706 (769)
+|||+++...... .....++..|++||.+....++.++|||||||++|||++|++||......... .........
T Consensus 160 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--- 236 (326)
T 2y0a_A 160 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF--- 236 (326)
T ss_dssp CCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCC---
T ss_pred EECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCc---
Confidence 9999997654322 22334566788899998889999999999999999999999999765433222 211111110
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+......++ .+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 237 -----~~~~~~~~~~----~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 277 (326)
T 2y0a_A 237 -----EDEYFSNTSA----LAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277 (326)
T ss_dssp -----CHHHHTTSCH----HHHHHHHHHSCSSGGGSCCHHHHHHSTTTSC
T ss_pred -----CccccccCCH----HHHHHHHHHccCChhhCCCHHHHhcCCCccC
Confidence 1111122333 4889999999999999999999999999864
No 32
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.3e-41 Score=357.23 Aligned_cols=266 Identities=17% Similarity=0.259 Sum_probs=202.8
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||+||+|+..+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+ .
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------~ 74 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK-------R 74 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS-------C
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCC-------e
Confidence 4688889999999999999999889999999997543 223467889999999999999999999998644 3
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||+++ +|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 75 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 150 (288)
T 1ob3_A 75 LVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF 150 (288)
T ss_dssp EEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHH
T ss_pred EEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECcccccc
Confidence 8999999974 99999986555799999999999999999999999 9999999999999999999999999999765
Q ss_pred hccC--CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhcc-cccccccc---
Q 004195 638 EARG--KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNI-GTDEARKS--- 709 (769)
Q Consensus 638 ~~~~--~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~-~~~~~~~~--- 709 (769)
.... .....++..|++||.+.+ ..++.++|||||||++|||+||++||....... ......... .....+..
T Consensus 151 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T 1ob3_A 151 GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE 230 (288)
T ss_dssp CC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred CccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhc
Confidence 3221 122334566888998765 458999999999999999999999997644322 222211100 00000000
Q ss_pred --ccCccc-------cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 710 --IVDPAV-------MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 710 --~~d~~~-------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..++.. ..........++.+++.+||+.||++|||++|+++|+||..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 286 (288)
T 1ob3_A 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286 (288)
T ss_dssp STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence 011110 00111122344889999999999999999999999999864
No 33
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=8.2e-42 Score=362.79 Aligned_cols=255 Identities=20% Similarity=0.308 Sum_probs=203.0
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
++|...+.||+|+||+||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++.+.. ..
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-------~~ 82 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK-------RL 82 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-------EE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC-------ee
Confidence 45778899999999999999976 69999999986554444567999999999999999999999998643 38
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++||||+++|+|.+++......++|.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 159 (310)
T 3s95_A 83 NFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMV 159 (310)
T ss_dssp EEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred EEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence 999999999999999986555799999999999999999999999 99999999999999999999999999996543
Q ss_pred ccCCc----------------ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc
Q 004195 639 ARGKG----------------SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG 702 (769)
Q Consensus 639 ~~~~~----------------~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~ 702 (769)
..... ...++..|++||.+.+..++.++|||||||++|||++|..|+..........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~------- 232 (310)
T 3s95_A 160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF------- 232 (310)
T ss_dssp --------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS-------
T ss_pred cccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH-------
Confidence 22211 2234456788999988899999999999999999999998876432110000
Q ss_pred cccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 703 TDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 703 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
........++.....+++ .+.+++.+||+.||++|||+.|+++.+....
T Consensus 233 -~~~~~~~~~~~~~~~~~~----~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 233 -GLNVRGFLDRYCPPNCPP----SFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp -SBCHHHHHHHTCCTTCCT----THHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -hhhhhccccccCCCCCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 000011111111223333 3889999999999999999999999888654
No 34
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=4.7e-41 Score=356.37 Aligned_cols=277 Identities=27% Similarity=0.447 Sum_probs=218.6
Q ss_pred ccccCHHHHHHHhcCCCCc------CccccCCceeEEEEEeCCCcEEEEEEccccCC----CChhHHHHHHHHHhhccCC
Q 004195 467 YRTFTLDELKEATDCFDSS------SFMCDASHGQIYKGKLTDGTLVAIRSLKMSKK----SSPHMYTYHIELISKLRHS 536 (769)
Q Consensus 467 ~~~~~~~el~~~t~~f~~~------~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~----~~~~~~~~Ei~~l~~l~H~ 536 (769)
...|+++++..++++|... +.||+|+||.||+|+. +++.||||++..... ...+.+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4578999999999999888 8999999999999997 588999999975421 2246789999999999999
Q ss_pred ceeeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcC--CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcc
Q 004195 537 NLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISG--PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLK 614 (769)
Q Consensus 537 nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlK 614 (769)
||+++++++.+.+. .++||||+++|+|.+++.. ....++|..+..++.|+++||+|||+. +|+|||||
T Consensus 91 ~i~~~~~~~~~~~~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlk 160 (307)
T 2nru_A 91 NLVELLGFSSDGDD-------LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIK 160 (307)
T ss_dssp TBCCEEEEECSSSS-------CEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCC
T ss_pred CeEEEEEEEecCCc-------eEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCC
Confidence 99999999976443 7999999999999999873 234699999999999999999999998 99999999
Q ss_pred ccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh
Q 004195 615 ITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV 690 (769)
Q Consensus 615 p~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~ 690 (769)
|+||++++++.+||+|||+++....... ....++..|++||... +.++.++|||||||++|||+||++||.....
T Consensus 161 p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 239 (307)
T 2nru_A 161 SANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239 (307)
T ss_dssp GGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHT-TEECTHHHHHHHHHHHHHHHHCCCSBCTTBS
T ss_pred HHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhc-CCCCccchhHHHHHHHHHHHHCCCCcccCcc
Confidence 9999999999999999999865433221 1123345677888764 4689999999999999999999999875332
Q ss_pred HH-HHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 691 VL-VKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 691 ~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.. ...+............+.+++.+ ...+......+.+++.+||+.||++|||+.|+++++....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 240 PQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp SSBTTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred hHHHHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 11 11111111111112233333333 3456677888999999999999999999999999998653
No 35
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.1e-41 Score=358.53 Aligned_cols=268 Identities=19% Similarity=0.295 Sum_probs=192.6
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|+..+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~------- 76 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTEN------- 76 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT-------
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECC-------
Confidence 457889999999999999999975 699999999975532 33467899999999999999999999997633
Q ss_pred eEEEEEeccCCCchhhhhcC-----CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCC
Q 004195 557 IIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
..++||||++ |+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 77 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 152 (317)
T 2pmi_A 77 KLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDF 152 (317)
T ss_dssp EEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcC
Confidence 4899999998 699998862 123589999999999999999999999 9999999999999999999999999
Q ss_pred CCchhhhccC--CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc--ccc
Q 004195 632 NLPLLAEARG--KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT--DEA 706 (769)
Q Consensus 632 Gla~~~~~~~--~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~--~~~ 706 (769)
|+++...... .....++..|++||.+.+ ..++.++|||||||++|||+||++||...........+...... ...
T Consensus 153 g~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 232 (317)
T 2pmi_A 153 GLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESL 232 (317)
T ss_dssp SSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTT
T ss_pred ccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhH
Confidence 9997654221 222344567888998865 46899999999999999999999999765433222211111110 000
Q ss_pred cc---------------------cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhccc
Q 004195 707 RK---------------------SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGL 761 (769)
Q Consensus 707 ~~---------------------~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~ 761 (769)
+. +...+......+ .++.+++.+||+.||++|||++|+++|+||.......
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~ 304 (317)
T 2pmi_A 233 WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLD----GNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHA 304 (317)
T ss_dssp CGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCC----HHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC--
T ss_pred hhhhhhhhhcccccccccchhHHHhhcccccccCC----HHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccchh
Confidence 00 001111111223 3489999999999999999999999999998765443
No 36
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.1e-41 Score=365.92 Aligned_cols=257 Identities=17% Similarity=0.257 Sum_probs=206.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC-----CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK-----KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
.+.|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+..
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--- 99 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG--- 99 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT---
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC---
Confidence 356889999999999999999975 79999999986431 224578999999999999999999999998643
Q ss_pred CCcceEEEEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce---e
Q 004195 553 PSISIIYLIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH---V 626 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~---~ 626 (769)
..++|||||++|+|.+.+.. .+..+++..+..++.||++||+|||+. +|+||||||+|||++.++. +
T Consensus 100 ----~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~v 172 (351)
T 3c0i_A 100 ----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPV 172 (351)
T ss_dssp ----EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCE
T ss_pred ----EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcE
Confidence 48999999999999888752 233589999999999999999999999 9999999999999986654 9
Q ss_pred eecCCCCchhhhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccc
Q 004195 627 KINSYNLPLLAEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTD 704 (769)
Q Consensus 627 kl~DFGla~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (769)
||+|||+++....... ....++..|++||.+.+..++.++|||||||++|||+||++||..........+......
T Consensus 173 kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~-- 250 (351)
T 3c0i_A 173 KLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYK-- 250 (351)
T ss_dssp EECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCC--
T ss_pred EEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCC--
Confidence 9999999976543321 223455678889999888899999999999999999999999987654433332221111
Q ss_pred cccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 705 EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 705 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.++......++ .+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 251 ------~~~~~~~~~s~----~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 293 (351)
T 3c0i_A 251 ------MNPRQWSHISE----SAKDLVRRMLMLDPAERITVYEALNHPWLKER 293 (351)
T ss_dssp ------CCHHHHTTSCH----HHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred ------CCccccccCCH----HHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence 11111122333 48899999999999999999999999999753
No 37
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3.1e-41 Score=352.67 Aligned_cols=258 Identities=18% Similarity=0.286 Sum_probs=207.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 82 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT----- 82 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCC-----
Confidence 467888999999999999999976 68899999986432 234567899999999999999999999997643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 83 --~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~ 156 (279)
T 3fdn_A 83 --RVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS 156 (279)
T ss_dssp --EEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEE
T ss_pred --EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEecccc
Confidence 4899999999999999997543 689999999999999999999998 9999999999999999999999999998
Q ss_pred hhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 635 LLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
............++..|++||.+.+..++.++||||||+++|||++|+.||...........+... ...
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-----------~~~ 225 (279)
T 3fdn_A 157 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------EFT 225 (279)
T ss_dssp SCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT-----------CCC
T ss_pred ccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhC-----------CCC
Confidence 655444334444566788899988888999999999999999999999999865543322211110 111
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcccc
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLK 762 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~~ 762 (769)
.....++ .+.+++.+||+.||++|||++|+++|+|+........
T Consensus 226 ~~~~~~~----~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~~~~ 269 (279)
T 3fdn_A 226 FPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269 (279)
T ss_dssp CCTTSCH----HHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCSSCC
T ss_pred CCCcCCH----HHHHHHHHHhccChhhCCCHHHHhhCccccCCccCcc
Confidence 1122333 4889999999999999999999999999987655443
No 38
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-41 Score=369.27 Aligned_cols=257 Identities=15% Similarity=0.214 Sum_probs=208.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.+.|+..+.||+|+||.||+|+.. +|+.||+|++..........+.+|++++++++|||||++++++.+.. .
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~-------~ 122 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY-------E 122 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS-------E
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC-------E
Confidence 467899999999999999999976 68999999997554334567899999999999999999999997643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC--CceeeecCCCCch
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE--NFHVKINSYNLPL 635 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~--~~~~kl~DFGla~ 635 (769)
.++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+++
T Consensus 123 ~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~ 199 (387)
T 1kob_A 123 MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLAT 199 (387)
T ss_dssp EEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCE
T ss_pred EEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccce
Confidence 8999999999999999986666799999999999999999999999 9999999999999974 5779999999997
Q ss_pred hhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-HhhhhhccccccccccccCc
Q 004195 636 LAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~ 713 (769)
....... ....++..|++||.+.+..++.++|||||||++|||+||++||........ ..+...... .++
T Consensus 200 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~--------~~~ 271 (387)
T 1kob_A 200 KLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWE--------FDE 271 (387)
T ss_dssp ECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCC--------CCS
T ss_pred ecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--------CCc
Confidence 6543322 223345667889999888899999999999999999999999976543222 221111110 112
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
......++ ++.+++.+||+.||++|||+.|+++|+|+...
T Consensus 272 ~~~~~~s~----~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 311 (387)
T 1kob_A 272 DAFSSVSP----EAKDFIKNLLQKEPRKRLTVHDALEHPWLKGD 311 (387)
T ss_dssp STTTTSCH----HHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSC
T ss_pred cccccCCH----HHHHHHHHHcCCChhHCcCHHHHhhCccccCC
Confidence 22223343 48899999999999999999999999998643
No 39
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.2e-41 Score=363.42 Aligned_cols=255 Identities=20% Similarity=0.266 Sum_probs=202.2
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+.++++++|||||++++++.+..
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~------- 78 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN------- 78 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSS-------
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-------
Confidence 357888999999999999999976 799999999975432 23467899999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 154 (323)
T 3tki_A 79 IQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATV 154 (323)
T ss_dssp EEEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccce
Confidence 4899999999999999998654 699999999999999999999998 999999999999999999999999999965
Q ss_pred hhccC----CcceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhH--HHHhhhhhcccccccccc
Q 004195 637 AEARG----KGSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVV--LVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 637 ~~~~~----~~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~--~~~~~~~~~~~~~~~~~~ 709 (769)
..... .....++..|++||.+.+..+ +.++|||||||++|||+||+.||...... ....+.....
T Consensus 155 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~-------- 226 (323)
T 3tki_A 155 FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-------- 226 (323)
T ss_dssp CEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT--------
T ss_pred eccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc--------
Confidence 43221 122334556788998877665 77999999999999999999999754321 1111111100
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
...+ ...+++ .+.+++.+||+.||++|||++|+++|+|+....
T Consensus 227 ~~~~--~~~~~~----~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 269 (323)
T 3tki_A 227 YLNP--WKKIDS----APLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (323)
T ss_dssp TSTT--GGGSCH----HHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred cCCc--cccCCH----HHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence 0000 112333 378999999999999999999999999997543
No 40
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=7.6e-41 Score=354.85 Aligned_cols=256 Identities=21% Similarity=0.306 Sum_probs=199.0
Q ss_pred HhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
..++|+..+.||+|+||+||+|+. +|+.||||++....... .+.+.+|++++++++||||+++++++.+...
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~----- 108 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN----- 108 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC-----
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc-----
Confidence 345788899999999999999987 58899999997553322 2468899999999999999999999976443
Q ss_pred ceEEEEEeccCCCchhhhhcCCCC--CCCHHHHHHHHHHHHHHhcccccCCCCC--ccccCccccceeeCCCceeeecCC
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGY--KLTWVQRIAAAIAIVKGVQFLHTGIVPG--VFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlKp~NILld~~~~~kl~DF 631 (769)
.++||||+++|+|.+++..... .+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+||+||
T Consensus 109 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Df 183 (309)
T 3p86_A 109 --LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDF 183 (309)
T ss_dssp --CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCC
T ss_pred --eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCC
Confidence 7999999999999999986532 389999999999999999999998 7 999999999999999999999999
Q ss_pred CCchhhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 632 NLPLLAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 632 Gla~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
|+++...... .....++..|++||.+.+..++.++|||||||++|||+||+.||...........+....
T Consensus 184 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~-------- 255 (309)
T 3p86_A 184 GLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC-------- 255 (309)
T ss_dssp C-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSC--------
T ss_pred CCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC--------
Confidence 9997543322 223345667889999988889999999999999999999999997654333222111110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
........+++ ++.+++.+||+.||++|||++|+++.+.....
T Consensus 256 -~~~~~~~~~~~----~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~ 298 (309)
T 3p86_A 256 -KRLEIPRNLNP----QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298 (309)
T ss_dssp -CCCCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred -CCCCCCccCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 01112223343 48899999999999999999999998876543
No 41
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.6e-41 Score=351.21 Aligned_cols=253 Identities=18% Similarity=0.295 Sum_probs=206.5
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|+..+.||+|+||.||+|+..+++.||||++.... ...+++.+|++++++++||||+++++++.+... .+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~-------~~ 81 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP-------IC 81 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS-------EE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCc-------eE
Confidence 4577889999999999999999888899999998543 345789999999999999999999999976443 89
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
+||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 158 (269)
T 4hcu_A 82 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158 (269)
T ss_dssp EEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccc
Confidence 99999999999999986666799999999999999999999999 999999999999999999999999999975432
Q ss_pred cC---CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 640 RG---KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 640 ~~---~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
.. .....++..|++||......++.++||||+|+++|||+| |+.||...........+... ..+..
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~----------~~~~~ 228 (269)
T 4hcu_A 159 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG----------FRLYK 228 (269)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT----------CCCCC
T ss_pred cccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC----------ccCCC
Confidence 21 111222335788999988899999999999999999999 99999765543332222111 01111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
....++ .+.+++.+||+.||++|||+.|+++++....+
T Consensus 229 ~~~~~~----~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 229 PRLAST----HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp CTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCcCCH----HHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 122233 48899999999999999999999999987654
No 42
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.1e-41 Score=376.54 Aligned_cols=265 Identities=14% Similarity=0.200 Sum_probs=212.2
Q ss_pred CHHHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeee
Q 004195 471 TLDELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCL 546 (769)
Q Consensus 471 ~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~ 546 (769)
.+.++...+++|+..+.||+|+||+||+|+.. +++.||||+++.. .....+.+.+|+.++..++|||||+++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 45566667889999999999999999999976 5889999999753 2233445899999999999999999999998
Q ss_pred ccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCcee
Q 004195 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHV 626 (769)
Q Consensus 547 ~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ 626 (769)
+.. ..++|||||++|+|.+++.+....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+
T Consensus 145 ~~~-------~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~v 214 (437)
T 4aw2_A 145 DDN-------NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHI 214 (437)
T ss_dssp CSS-------EEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCE
T ss_pred eCC-------EEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCE
Confidence 643 48999999999999999987555799999999999999999999998 99999999999999999999
Q ss_pred eecCCCCchhhhccCC---cceeecCCCcchhhhc-----cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhh
Q 004195 627 KINSYNLPLLAEARGK---GSAEVSSPAKKTSVLA-----RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLL 697 (769)
Q Consensus 627 kl~DFGla~~~~~~~~---~~~~~~~~~~~pe~~~-----~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~ 697 (769)
||+|||+++....... ....++..|++||.+. ...++.++|||||||++|||+||++||....... ...++
T Consensus 215 kL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~ 294 (437)
T 4aw2_A 215 RLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 294 (437)
T ss_dssp EECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred EEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhh
Confidence 9999999965433222 2234566778899876 4568999999999999999999999997654332 22222
Q ss_pred hhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCC--CCCHHHHHHHhHhhh
Q 004195 698 QVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKD--RPSVEDTLWNLQFAT 756 (769)
Q Consensus 698 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~l~~~~ 756 (769)
... ....-|......+++ +.+++.+|+..+|++ ||+++|+++|+||..
T Consensus 295 ~~~-------~~~~~p~~~~~~s~~----~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~ 344 (437)
T 4aw2_A 295 NHK-------ERFQFPTQVTDVSEN----AKDLIRRLICSREHRLGQNGIEDFKKHPFFSG 344 (437)
T ss_dssp THH-------HHCCCCSSCCCSCHH----HHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTT
T ss_pred hcc-------ccccCCcccccCCHH----HHHHHHHHhcccccccCCCCHHHHhCCCccCC
Confidence 110 001112211223443 889999999988888 999999999999974
No 43
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=5e-41 Score=364.13 Aligned_cols=258 Identities=17% Similarity=0.203 Sum_probs=207.2
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
...++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++|||||++++++.+..
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~---- 101 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES---- 101 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS----
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC----
Confidence 34567999999999999999999976 6999999999755332 2356889999999999999999999998643
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC---ceeeecC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN---FHVKINS 630 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~---~~~kl~D 630 (769)
..++||||+++|+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|
T Consensus 102 ---~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~D 174 (362)
T 2bdw_A 102 ---FHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLAD 174 (362)
T ss_dssp ---EEEEEECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECC
T ss_pred ---EEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEee
Confidence 4899999999999999997554 689999999999999999999999 99999999999999765 4599999
Q ss_pred CCCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhh-hhccccccccc
Q 004195 631 YNLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLL-QVNIGTDEARK 708 (769)
Q Consensus 631 FGla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~-~~~~~~~~~~~ 708 (769)
||+++....... ....++..|++||.+.+..++.++|||||||++|||++|++||...........+ ......
T Consensus 175 fG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~----- 249 (362)
T 2bdw_A 175 FGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY----- 249 (362)
T ss_dssp CTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC-----
T ss_pred cCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC-----
Confidence 999976543322 2334566788999998888999999999999999999999999765433222211 111110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
........++ ++.+++.+||+.||++|||+.|+++|+|+...
T Consensus 250 ---~~~~~~~~~~----~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 291 (362)
T 2bdw_A 250 ---PSPEWDTVTP----EAKSLIDSMLTVNPKKRITADQALKVPWICNR 291 (362)
T ss_dssp ---CTTGGGGSCH----HHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred ---CcccccCCCH----HHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence 0111122333 48899999999999999999999999998643
No 44
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=366.66 Aligned_cols=252 Identities=15% Similarity=0.214 Sum_probs=203.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~ 553 (769)
.++|+..+.||+|+||.||+|+.. +|+.||||+++.. .....+.+.+|.++++.+ +||||+++++++.+.+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~---- 97 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD---- 97 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC----
Confidence 467999999999999999999976 6899999999754 233456788999999988 6999999999998643
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..|+||||+++|+|.+++.+.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 98 ---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~ 170 (353)
T 3txo_A 98 ---RLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGM 170 (353)
T ss_dssp ---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred ---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccc
Confidence 4899999999999999997543 689999999999999999999999 999999999999999999999999999
Q ss_pred chhhhcc--CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 634 PLLAEAR--GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 634 a~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
++..... ......++..|++||.+.+..++.++|||||||++|||+||++||...........+...
T Consensus 171 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~----------- 239 (353)
T 3txo_A 171 CKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND----------- 239 (353)
T ss_dssp CBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------
T ss_pred eeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcC-----------
Confidence 8753222 222334566788999998888999999999999999999999999765543322221110
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCH------HHHHHHhHhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSV------EDTLWNLQFAT 756 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~l~~~~ 756 (769)
........++ .+.+++.+|++.||++||++ +|+++|+||..
T Consensus 240 ~~~~p~~~~~----~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~ 286 (353)
T 3txo_A 240 EVVYPTWLHE----DATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE 286 (353)
T ss_dssp CCCCCTTSCH----HHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTT
T ss_pred CCCCCCCCCH----HHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccC
Confidence 0111112333 48899999999999999998 99999999975
No 45
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.6e-41 Score=367.94 Aligned_cols=254 Identities=19% Similarity=0.317 Sum_probs=196.1
Q ss_pred cCCCCcCccccCCceeEEEEEeC----CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT----DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|+..+.||+|+||.||+|+.. ++..||||+++.... ...+++.+|++++++++||||++++++|.+...
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 120 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP---- 120 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS----
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCc----
Confidence 46889999999999999999864 577899999975422 223578999999999999999999999976443
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.++||||+++|+|.++++.....+++.++..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 121 ---~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 194 (373)
T 2qol_A 121 ---VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLG 194 (373)
T ss_dssp ---CEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---
T ss_pred ---eEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccc
Confidence 7999999999999999987666799999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhccCCcc-----eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 635 LLAEARGKGS-----AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 635 ~~~~~~~~~~-----~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
+......... ...+..|++||.+....++.++|||||||++|||++ |+.||...........+....
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~------- 267 (373)
T 2qol_A 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY------- 267 (373)
T ss_dssp -------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTE-------
T ss_pred cccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-------
Confidence 7654322111 112345888999988899999999999999999998 999987654433322221110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.......++ ..+.+++.+||+.||++||++.||++.+.....
T Consensus 268 ---~~~~~~~~~----~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 268 ---RLPPPMDCP----AALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp ---ECCCCTTCB----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCCcccc----HHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 011111233 348899999999999999999999999987644
No 46
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.3e-41 Score=354.43 Aligned_cols=253 Identities=17% Similarity=0.229 Sum_probs=197.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--------------------------ChhHHHHHHHHHhh
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--------------------------SPHMYTYHIELISK 532 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--------------------------~~~~~~~Ei~~l~~ 532 (769)
++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 57888999999999999999975 6899999999754211 12568899999999
Q ss_pred ccCCceeeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccC
Q 004195 533 LRHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612 (769)
Q Consensus 533 l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrD 612 (769)
++||||+++++++.+.. ....++||||+++++|.+++... .+++..+..++.|+++||+|||+. +|+|||
T Consensus 93 l~h~~iv~~~~~~~~~~-----~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~D 162 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPN-----EDHLYMVFELVNQGPVMEVPTLK--PLSEDQARFYFQDLIKGIEYLHYQ---KIIHRD 162 (298)
T ss_dssp CCCTTBCCEEEEEECSS-----SSEEEEEEECCTTCBSCCSSCSS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred CCCCCCCeEEEEEEcCC-----CCEEEEEEecCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccC
Confidence 99999999999997532 34589999999999999876543 689999999999999999999999 999999
Q ss_pred ccccceeeCCCceeeecCCCCchhhhccCC--cceeecCCCcchhhhccCC---CCCCCCeeehhHHHHHHHhCCCCCCC
Q 004195 613 LKITDVLLDENFHVKINSYNLPLLAEARGK--GSAEVSSPAKKTSVLARTE---QDDKSDVYDIGIILIEIIVGRPITSE 687 (769)
Q Consensus 613 lKp~NILld~~~~~kl~DFGla~~~~~~~~--~~~~~~~~~~~pe~~~~~~---~~~ksDVwS~Gvil~elltG~~p~~~ 687 (769)
|||+||+++.++.+||+|||+++....... ....++..|++||.+.+.. ++.++|||||||++|||++|+.||..
T Consensus 163 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 163 IKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 999999999999999999999976543221 2223455678899876554 37789999999999999999999976
Q ss_pred chhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 688 NVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
.........+.... ........+++ .+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 243 ~~~~~~~~~~~~~~---------~~~~~~~~~~~----~l~~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 243 ERIMCLHSKIKSQA---------LEFPDQPDIAE----DLKDLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp SSHHHHHHHHHHCC---------CCCCSSSCCCH----HHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred ccHHHHHHHHhccc---------CCCCCccccCH----HHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 54332222111100 00011123344 388999999999999999999999999985
No 47
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=7.3e-41 Score=355.96 Aligned_cols=249 Identities=16% Similarity=0.232 Sum_probs=206.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+|+.. +|+.||+|+++.. .....+.+.+|+.+++.++||||+++++++.+..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~------ 79 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ------ 79 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS------
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC------
Confidence 56888999999999999999976 7999999999754 2344567889999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 80 -~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~ 154 (318)
T 1fot_A 80 -QIFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAK 154 (318)
T ss_dssp -EEEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred -EEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcce
Confidence 4899999999999999998544 689999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccccccccccCcc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
..... .....++..|++||.+.+..++.++|||||||++|||++|++||....... ...+.... ..
T Consensus 155 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~------------~~ 221 (318)
T 1fot_A 155 YVPDV-TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE------------LR 221 (318)
T ss_dssp ECSSC-BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCC------------CC
T ss_pred ecCCc-cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC------------CC
Confidence 65432 223345667889999988899999999999999999999999997654322 22222111 11
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
+....++ ++.+++.+|++.||++|| +++|+++|+||..
T Consensus 222 ~p~~~~~----~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~ 264 (318)
T 1fot_A 222 FPPFFNE----DVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264 (318)
T ss_dssp CCTTSCH----HHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred CCCCCCH----HHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccC
Confidence 1122333 488999999999999999 9999999999964
No 48
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.4e-41 Score=366.85 Aligned_cols=252 Identities=18% Similarity=0.223 Sum_probs=199.7
Q ss_pred CcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEE
Q 004195 484 SSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIF 562 (769)
Q Consensus 484 ~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~ 562 (769)
..+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|++++++++|||||+++++|.+.+ ..++||
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-------~~~lv~ 165 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN-------DIVLVM 165 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-------EEEEEE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC-------EEEEEE
Confidence 3578999999999999975 79999999998654445578999999999999999999999998643 489999
Q ss_pred eccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee--CCCceeeecCCCCchhhhcc
Q 004195 563 EYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL--DENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 563 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl--d~~~~~kl~DFGla~~~~~~ 640 (769)
||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+|||+ ++++.+||+|||+++.....
T Consensus 166 E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~ 242 (373)
T 2x4f_A 166 EYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR 242 (373)
T ss_dssp ECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT
T ss_pred eCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc
Confidence 99999999999875555799999999999999999999999 99999999999999 67789999999999765433
Q ss_pred CC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccccccccccccCccccCC
Q 004195 641 GK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEARKSIVDPAVMNE 718 (769)
Q Consensus 641 ~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~ 718 (769)
.. ....++..|++||.+....++.++|||||||++|||+||++||...... ....+...... ..+.....
T Consensus 243 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~--------~~~~~~~~ 314 (373)
T 2x4f_A 243 EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD--------LEDEEFQD 314 (373)
T ss_dssp CBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--------SCSGGGTT
T ss_pred cccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC--------CChhhhcc
Confidence 22 2233556788899988888999999999999999999999999765432 22222221111 11111123
Q ss_pred CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 719 CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 719 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+++ ++.+++.+||+.||++|||+.|+++|+|+...
T Consensus 315 ~~~----~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 315 ISE----EAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp SCH----HHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred CCH----HHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 344 48899999999999999999999999998754
No 49
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=8.5e-42 Score=359.95 Aligned_cols=269 Identities=18% Similarity=0.270 Sum_probs=201.3
Q ss_pred cCCCCcCccccCCceeEEEEEe-----CCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL-----TDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|+..+.||+|+||+||+|++ .+++.||||++........+.+.+|++++++++||||++++++|...+.
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 85 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR---- 85 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH----
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC----
Confidence 4677889999999999999984 2688999999985544344678999999999999999999999865322
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
...++||||+++|+|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 86 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~ 161 (295)
T 3ugc_A 86 -RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLT 161 (295)
T ss_dssp -TSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred -CceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccc
Confidence 237999999999999999986655699999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhccCCc-----ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccc--ccc
Q 004195 635 LLAEARGKG-----SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTD--EAR 707 (769)
Q Consensus 635 ~~~~~~~~~-----~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~--~~~ 707 (769)
+........ ....+..|++||.+.+..++.++|||||||++|||+||..|+................... ...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (295)
T 3ugc_A 162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241 (295)
T ss_dssp C-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred ccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHH
Confidence 765433211 1112234788999988899999999999999999999999887543221111000000000 000
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+.+........+...+.++.+++.+||+.||++|||+.|+++.+....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~ 290 (295)
T 3ugc_A 242 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290 (295)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 0000011011112223344899999999999999999999999998664
No 50
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=5e-41 Score=359.02 Aligned_cols=255 Identities=18% Similarity=0.286 Sum_probs=203.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC----CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT----DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|...+.||+|+||.||+|++. .+..||||+++.... ...+.+.+|++++++++||||+++++++.+...
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 124 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL---- 124 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC----
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc----
Confidence 45778899999999999999974 345699999975422 224578999999999999999999999976443
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.++||||+++|+|.++++.....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 125 ---~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 198 (325)
T 3kul_A 125 ---AMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLS 198 (325)
T ss_dssp ---CEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSC
T ss_pred ---cEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcc
Confidence 7999999999999999986656799999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhccCCcce-----eecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 635 LLAEARGKGSA-----EVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 635 ~~~~~~~~~~~-----~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
+.......... ..+..|++||.+.+..++.++|||||||++|||++ |+.||...........+...
T Consensus 199 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~-------- 270 (325)
T 3kul_A 199 RVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-------- 270 (325)
T ss_dssp EECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT--------
T ss_pred cccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC--------
Confidence 76543322111 11224788999988889999999999999999999 99999765443332222111
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
..+.....+++ .+.+++.+||+.||++|||+.|+++.+......
T Consensus 271 --~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 271 --YRLPAPMGCPH----ALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp --CCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred --CCCCCCCCcCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 01111123343 488999999999999999999999999876543
No 51
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=5e-41 Score=372.74 Aligned_cols=257 Identities=17% Similarity=0.173 Sum_probs=205.5
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
..++|+..+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|++++++++|||||++++++.+.+
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 83 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEG----- 83 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS-----
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC-----
Confidence 4567899999999999999999965 7999999999754322 2356889999999999999999999998643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC---CCceeeecCC
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD---ENFHVKINSY 631 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld---~~~~~kl~DF 631 (769)
..++||||+++|+|.+.+.... .+++..+..++.|+++||+|||+. +|+||||||+|||++ +++.+||+||
T Consensus 84 --~~~lv~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DF 157 (444)
T 3soa_A 84 --HHYLIFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADF 157 (444)
T ss_dssp --EEEEEECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCC
T ss_pred --EEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccC
Confidence 4899999999999999987554 689999999999999999999999 999999999999998 4678999999
Q ss_pred CCchhhhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhh-hccccccccc
Q 004195 632 NLPLLAEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQ-VNIGTDEARK 708 (769)
Q Consensus 632 Gla~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~-~~~~~~~~~~ 708 (769)
|+++....... ....++..|++||.+.+..++.++||||+||++|||++|++||...........+. .....
T Consensus 158 G~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~----- 232 (444)
T 3soa_A 158 GLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF----- 232 (444)
T ss_dssp SSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC-----
T ss_pred ceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCC-----
Confidence 99966543322 22345567888999988889999999999999999999999997654433222221 11110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
........++ ++.+++.+||+.||++|||+.|+++|+|+...
T Consensus 233 ---~~~~~~~~s~----~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~ 274 (444)
T 3soa_A 233 ---PSPEWDTVTP----EAKDLINKMLTINPSKRITAAEALKHPWISHR 274 (444)
T ss_dssp ---CTTTTTTSCH----HHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred ---CccccccCCH----HHHHHHHHHcCCChhHCCCHHHHhcCccccCC
Confidence 1111122333 48899999999999999999999999998754
No 52
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=9.7e-41 Score=397.85 Aligned_cols=329 Identities=24% Similarity=0.289 Sum_probs=226.3
Q ss_pred CcCccCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCCcceEecCCCeeEEEeCCCCCCCC----C---C--
Q 004195 23 PHSNQLQLFQYQTLVRIQQLLNYPSVSSSFNTTTVTDFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNI----N---G-- 93 (769)
Q Consensus 23 ~~~~~~~~~~~~~ll~~k~~~~~~~~l~~w~~~~~~~~c~~~~~~~~~v~C~~~~v~~l~l~~~~~~~~----~---~-- 93 (769)
++++++.+.|++||++||+++.||..+++|+.++ +||.|.| |+|+.++|+.|++++..+.+. + .
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~--~~C~w~g-----v~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L 76 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLPDKNLLPDWSSNK--NPCTFDG-----VTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSL 76 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCSCTTSSTTCCTTS--CGGGSTT-----EEEETTEEEEEECTTSCCCEEHHHHHHHTTTC
T ss_pred CccccCCHHHHHHHHHHHhhCCCcccccCCCCCC--CCcCCcc-----eEECCCcEEEEECCCCCcCCccCccChhHhcc
Confidence 3444556789999999999998887889998665 8999985 999988999999998766542 1 1
Q ss_pred ---CCCCCCCCCcc--ccccCCCCCCcEEEeecccccCCCCc--cccCCCcCceeeccCcccCCcCCccc-cCCCcCCEE
Q 004195 94 ---GLAHNFSTDTF--FSTLGSLSSLKVLSLVSLGLWGPLPG--SIAHSSSLEILNLSSNYLSGSIPVQI-SSLRNLQTL 165 (769)
Q Consensus 94 ---~l~~n~~~~~~--~~~~~~l~~L~~L~L~~n~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L 165 (769)
++..+...+.. |..++++++|++|+|++|.++|.+|. .++++++|++|||++|.+++.+|..+ .++++|++|
T Consensus 77 ~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 156 (768)
T 3rgz_A 77 TGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVL 156 (768)
T ss_dssp TTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEE
T ss_pred CcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEE
Confidence 11112222333 37888999999999999999988888 89999999999999999988888776 788888888
Q ss_pred EcccCcCCccCCcc---CcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCc
Q 004195 166 ILDDNKFTGAVPSE---LSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNY 242 (769)
Q Consensus 166 ~L~~N~l~~~~p~~---~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~ 242 (769)
+|++|++++..|.. +.++++|++|+|++|.+++.+|. .++++|++|+|++|++++.+|.++++++|++|++++|.
T Consensus 157 ~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~ 234 (768)
T 3rgz_A 157 DLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNK 234 (768)
T ss_dssp ECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSC
T ss_pred ECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCc
Confidence 88888888877776 67777777777777777765553 66777777777777777766667777777777777777
Q ss_pred CCCCCccc---ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCC-CCCCEEEccCCcCCcccc
Q 004195 243 FGPRFPRL---HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSL-PSITYLDIHGNKLTGLLL 318 (769)
Q Consensus 243 l~~~~p~~---~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~ 318 (769)
+++.+|.. +++|++|++++|.+.+.+ |.. .+++|++|+|++|.+++.+|..+... ++|++|+|++|++++.+|
T Consensus 235 l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~-~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p 311 (768)
T 3rgz_A 235 LSGDFSRAISTCTELKLLNISSNQFVGPI-PPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 311 (768)
T ss_dssp CCSCHHHHTTTCSSCCEEECCSSCCEESC-CCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCC
T ss_pred CCCcccHHHhcCCCCCEEECCCCcccCcc-Ccc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccc
Confidence 76665543 345666666666665544 322 45555555555555555555555443 555555555555555555
Q ss_pred ccCCCCCCCcEEEccCCcCCCCCCcc-ccccCCCceEECCCCCCCh
Q 004195 319 QNMSCNPQLAFVDLSSNLLTGYLPSC-LQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 319 ~~~~~l~~L~~l~l~~N~l~g~~p~~-~~~~~~l~~l~l~~N~l~~ 363 (769)
..++.+++|+.|++++|+++|.+|.. +..+++++.+++++|.+++
T Consensus 312 ~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~ 357 (768)
T 3rgz_A 312 PFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSG 357 (768)
T ss_dssp GGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEE
T ss_pred hHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCc
Confidence 55555555555555555555555543 4555555555555555443
No 53
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.3e-41 Score=363.49 Aligned_cols=253 Identities=18% Similarity=0.269 Sum_probs=206.6
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~ 552 (769)
..++|...+.||+|+||.||+|+.+ +|+.||||+++... ....+.+.+|..++..+ +||||+++++++.+..
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~--- 91 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE--- 91 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS---
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC---
Confidence 4568999999999999999999976 68999999997542 34456788899999887 8999999999998643
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
..++||||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 92 ----~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG 163 (345)
T 1xjd_A 92 ----NLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFG 163 (345)
T ss_dssp ----EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred ----EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeECh
Confidence 4899999999999999997543 689999999999999999999999 99999999999999999999999999
Q ss_pred Cchhhhc--cCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 633 LPLLAEA--RGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 633 la~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
+++.... .......++..|++||.+.+..++.++|||||||++|||++|++||...........+...
T Consensus 164 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~---------- 233 (345)
T 1xjd_A 164 MCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD---------- 233 (345)
T ss_dssp TCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC----------
T ss_pred hhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC----------
Confidence 9965322 1223334556788899998888999999999999999999999999765443322222110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHH-HHHHHhHhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVE-DTLWNLQFAT 756 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~~l~~~~ 756 (769)
.+.+....++ ++.+++.+||+.||++||++. |+++|+||..
T Consensus 234 -~~~~p~~~s~----~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~ 275 (345)
T 1xjd_A 234 -NPFYPRWLEK----EAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 275 (345)
T ss_dssp -CCCCCTTSCH----HHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred -CCCCCcccCH----HHHHHHHHHhcCCHhHcCCChHHHHcCccccC
Confidence 1111122333 488999999999999999998 9999999864
No 54
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.5e-41 Score=365.09 Aligned_cols=255 Identities=19% Similarity=0.331 Sum_probs=202.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC--------CCcEEEEEEccccCC-CChhHHHHHHHHHhhc-cCCceeeEeeeeeccC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT--------DGTLVAIRSLKMSKK-SSPHMYTYHIELISKL-RHSNLVSALGHCLDFS 549 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~--------~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~ 549 (769)
++|...+.||+|+||.||+|+.. ++..||||+++.... ...+.+.+|+++++++ +|||||+++++|.+.+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 56888899999999999999852 356799999975422 1235689999999999 8999999999997644
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCCC---------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcc
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGPG---------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLK 614 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlK 614 (769)
. .++||||+++|+|.+++.... ..+++.++..++.||++||+|||+. +|+|||||
T Consensus 161 ~-------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlk 230 (370)
T 2psq_A 161 P-------LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLA 230 (370)
T ss_dssp S-------CEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCC
T ss_pred C-------EEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccc
Confidence 3 799999999999999997332 3589999999999999999999999 99999999
Q ss_pred ccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCch
Q 004195 615 ITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENV 689 (769)
Q Consensus 615 p~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~ 689 (769)
|+|||++.++.+||+|||+++....... .....+..|++||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 231 p~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~ 310 (370)
T 2psq_A 231 ARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 310 (370)
T ss_dssp GGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 9999999999999999999975543221 11122345788999988899999999999999999999 999987654
Q ss_pred hHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 690 VVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.......+... ..+.....+++ .+.+++.+||+.||++|||+.|+++++..+...
T Consensus 311 ~~~~~~~~~~~----------~~~~~~~~~~~----~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~ 365 (370)
T 2psq_A 311 VEELFKLLKEG----------HRMDKPANCTN----ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365 (370)
T ss_dssp GGGHHHHHHTT----------CCCCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcC----------CCCCCCCCCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 33322222111 01111223333 488999999999999999999999999876543
No 55
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-41 Score=363.25 Aligned_cols=253 Identities=17% Similarity=0.224 Sum_probs=203.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|+++++.++||||+++++++.+..
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------ 82 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT------ 82 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS------
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC------
Confidence 57888999999999999999974 7999999998643 2233467899999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+ +|+|.+++...+ .+++.++..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++.
T Consensus 83 -~~~lv~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~ 156 (336)
T 3h4j_B 83 -DIVMVIEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSN 156 (336)
T ss_dssp -EEEEEECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTB
T ss_pred -EEEEEEECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccce
Confidence 489999999 689999887443 689999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCC-cceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LAEARGK-GSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~~-~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
....... ....++..|++||.+.+..+ ++++|||||||++|||++|+.||.+.........+ .. ...
T Consensus 157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i----~~-------~~~ 225 (336)
T 3h4j_B 157 IMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV----NS-------CVY 225 (336)
T ss_dssp TTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCC----CS-------SCC
T ss_pred eccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHH----Hc-------CCC
Confidence 6544332 33345567888998877666 78999999999999999999999754321111000 00 001
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
......+ ..+.+++.+||+.||++|||++|+++|+||....+
T Consensus 226 ~~p~~~s----~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~ 267 (336)
T 3h4j_B 226 VMPDFLS----PGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLP 267 (336)
T ss_dssp CCCTTSC----HHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTTCC
T ss_pred CCcccCC----HHHHHHHHHHcCCChhHCcCHHHHHhChhhccCCc
Confidence 1112233 34889999999999999999999999999986543
No 56
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.8e-40 Score=346.05 Aligned_cols=253 Identities=18% Similarity=0.233 Sum_probs=187.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----- 87 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDE----- 87 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSC-----
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCe-----
Confidence 47889999999999999999965 79999999997542 2334678999999999999999999999986443
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
.++||||+ +++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++.
T Consensus 88 --~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 160 (275)
T 2eue_A 88 --IIMVIEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN 160 (275)
T ss_dssp --EEEEEECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-
T ss_pred --EEEEehhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccce
Confidence 89999999 678888887554 699999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCC-cceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LAEARGK-GSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~~-~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
....... ....++..|++||.+.+..+ +.++|||||||++|||+||+.||...........+.... .
T Consensus 161 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-----------~ 229 (275)
T 2eue_A 161 IMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV-----------Y 229 (275)
T ss_dssp --------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-----------C
T ss_pred eccCcccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-----------C
Confidence 6543322 23345567888998877665 789999999999999999999998755433322221110 1
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
.....+++ .+.+++.+||+.||++|||++|+++|+||....+
T Consensus 230 ~~~~~~~~----~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~~~~ 271 (275)
T 2eue_A 230 TLPKFLSP----GAAGLIKRMLIVNPLNRISIHEIMQDDWFKVDLP 271 (275)
T ss_dssp CCCTTSCH----HHHHHHHHHSCSSGGGSCCHHHHTTCHHHHTTCC
T ss_pred CCCccCCH----HHHHHHHHHhhcCHhHCCCHHHHhhCCeecccch
Confidence 11122333 3889999999999999999999999999987544
No 57
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.7e-41 Score=349.84 Aligned_cols=254 Identities=19% Similarity=0.266 Sum_probs=205.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.++|+..+.||+|+||.||+|+.+++..||||+++... ...+++.+|++++++++||||+++++++.+... .
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~-------~ 78 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYP-------I 78 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS-------E
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCc-------e
Confidence 35688889999999999999999888899999997543 345779999999999999999999999976433 8
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++||||+++++|.+++...+..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 155 (268)
T 3sxs_A 79 YIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVL 155 (268)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECC
T ss_pred EEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecc
Confidence 999999999999999986555699999999999999999999999 99999999999999999999999999997553
Q ss_pred ccCCcc---eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 639 ARGKGS---AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 639 ~~~~~~---~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
...... ..++..|++||...+..++.++||||||+++|||+| |+.||...........+.... .+.
T Consensus 156 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~----------~~~ 225 (268)
T 3sxs_A 156 DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH----------RLY 225 (268)
T ss_dssp TTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC----------CCC
T ss_pred hhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCC----------CCC
Confidence 322111 112234788999888889999999999999999999 999987654332222111100 011
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.....++ .+.+++.+||+.||++|||+.|++++++...+
T Consensus 226 ~~~~~~~----~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 226 RPHLASD----TIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp CCTTSCH----HHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred CCCcChH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 1112233 48899999999999999999999999987644
No 58
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2e-40 Score=351.72 Aligned_cols=275 Identities=19% Similarity=0.271 Sum_probs=204.5
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-----CChhHHHHHHHHHhhcc---CCceeeEeeeeecc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-----SSPHMYTYHIELISKLR---HSNLVSALGHCLDF 548 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-----~~~~~~~~Ei~~l~~l~---H~nIv~l~~~~~~~ 548 (769)
.+++|+..+.||+|+||+||+|+.. +|+.||||+++.... .....+.+|++++++++ ||||++++++|.+.
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 3678999999999999999999964 799999999975422 22357888998888775 99999999999764
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceee
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVK 627 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~k 627 (769)
..+ .....++||||++ |+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 87 ~~~--~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~k 160 (308)
T 3g33_A 87 RTD--REIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVK 160 (308)
T ss_dssp CSS--SEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEE
T ss_pred CCC--CceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEE
Confidence 321 2335799999997 69999998543 3499999999999999999999999 999999999999999999999
Q ss_pred ecCCCCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-Hhhhhhc-cccc
Q 004195 628 INSYNLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVN-IGTD 704 (769)
Q Consensus 628 l~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~-~~~~ 704 (769)
|+|||+++....... ....++..|++||.+.+..++.++|||||||++|||+||++||........ ..+.... ....
T Consensus 161 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (308)
T 3g33_A 161 LADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240 (308)
T ss_dssp ECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred EeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 999999976543322 233456678899999888999999999999999999999999976543322 2222111 0111
Q ss_pred cccccc-------cCcccc---CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 705 EARKSI-------VDPAVM---NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 705 ~~~~~~-------~d~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
..+... +.+... ....++....+.+++.+||+.||++|||+.|+++|+|+....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~ 304 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 304 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence 111000 000000 000011234588999999999999999999999999998653
No 59
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=7.2e-41 Score=365.26 Aligned_cols=255 Identities=18% Similarity=0.201 Sum_probs=202.0
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~ 553 (769)
.++|+..+.||+|+||.||+|+.+ +++.||||+++.... ...+.+.+|..++.++ +|||||++++++.+..
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~---- 126 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES---- 126 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS----
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC----
Confidence 356888999999999999999976 688999999986532 2235688999999887 8999999999998643
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..++||||+++|+|.+++.+.+ .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 127 ---~~~lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGl 199 (396)
T 4dc2_A 127 ---RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGM 199 (396)
T ss_dssp ---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred ---EEEEEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecce
Confidence 4899999999999999998543 699999999999999999999999 999999999999999999999999999
Q ss_pred chhhhc--cCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH------HHhhhhhcccccc
Q 004195 634 PLLAEA--RGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL------VKDLLQVNIGTDE 705 (769)
Q Consensus 634 a~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~------~~~~~~~~~~~~~ 705 (769)
++.... .......++..|++||.+.+..++.++|||||||++|||++|++||....... .....+....
T Consensus 200 a~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--- 276 (396)
T 4dc2_A 200 CKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--- 276 (396)
T ss_dssp CBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH---
T ss_pred eeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc---
Confidence 975221 22233455667889999998899999999999999999999999996321100 0000000000
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCH------HHHHHHhHhhh
Q 004195 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSV------EDTLWNLQFAT 756 (769)
Q Consensus 706 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~l~~~~ 756 (769)
....+....+ .++.+++.+||+.||++||++ +||++|+||..
T Consensus 277 -----~~~~~p~~~s----~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~ 324 (396)
T 4dc2_A 277 -----KQIRIPRSLS----VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324 (396)
T ss_dssp -----CCCCCCTTSC----HHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTT
T ss_pred -----cccCCCCcCC----HHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccC
Confidence 0111112233 348899999999999999984 89999999964
No 60
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1e-40 Score=359.57 Aligned_cols=250 Identities=18% Similarity=0.217 Sum_probs=207.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|++++++++||||+++++++.+..
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~------ 114 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS------ 114 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS------
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC------
Confidence 57888999999999999999976 6999999999654 2344567889999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++.+.+ .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 115 -~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~ 189 (350)
T 1rdq_E 115 -NLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189 (350)
T ss_dssp -EEEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred -EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccce
Confidence 4899999999999999998544 589999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
...... ....++..|++||.+.+..++.++|||||||++|||++|++||...........+... ...+
T Consensus 190 ~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~-----------~~~~ 257 (350)
T 1rdq_E 190 RVKGRT-WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG-----------KVRF 257 (350)
T ss_dssp ECSSCB-CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------CCCC
T ss_pred eccCCc-ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC-----------CCCC
Confidence 654332 2345667788999998889999999999999999999999999765433222211110 0111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
...+++ .+.+++.+||+.||++||+ ++|+++|+||..
T Consensus 258 p~~~~~----~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~ 299 (350)
T 1rdq_E 258 PSHFSS----DLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299 (350)
T ss_dssp CTTCCH----HHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred CCCCCH----HHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCC
Confidence 123333 4889999999999999998 999999999864
No 61
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.4e-40 Score=350.17 Aligned_cols=267 Identities=19% Similarity=0.246 Sum_probs=200.1
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|+||+||+|+.. +|+.||||+++...... .+.+.+|++++++++||||+++++++.+..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------- 74 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK------- 74 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-------
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC-------
Confidence 46888999999999999999976 68999999997654322 367889999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++ ++.+.+......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 75 ~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 150 (292)
T 3o0g_A 75 KLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARA 150 (292)
T ss_dssp EEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccccee
Confidence 48999999975 66666654444799999999999999999999999 999999999999999999999999999976
Q ss_pred hhccC--CcceeecCCCcchhhhccCC-CCCCCCeeehhHHHHHHHhCCCCC-CCchhH-HHHhhhhhccc-cccccccc
Q 004195 637 AEARG--KGSAEVSSPAKKTSVLARTE-QDDKSDVYDIGIILIEIIVGRPIT-SENVVV-LVKDLLQVNIG-TDEARKSI 710 (769)
Q Consensus 637 ~~~~~--~~~~~~~~~~~~pe~~~~~~-~~~ksDVwS~Gvil~elltG~~p~-~~~~~~-~~~~~~~~~~~-~~~~~~~~ 710 (769)
..... .....++..|++||.+.+.. ++.++|||||||++|||+||+.|+ ...... ....+...... ....+...
T Consensus 151 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 230 (292)
T 3o0g_A 151 FGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSM 230 (292)
T ss_dssp CCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTG
T ss_pred cCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhh
Confidence 53222 12223455678899886655 799999999999999999987664 333222 22222111110 11111000
Q ss_pred ---cC---------ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 711 ---VD---------PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 711 ---~d---------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+ ........+.....+.+++.+|++.||++|||++|+++|+||...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 289 (292)
T 3o0g_A 231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289 (292)
T ss_dssp GGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred cccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccC
Confidence 00 000001112233458899999999999999999999999999753
No 62
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=6.1e-41 Score=364.60 Aligned_cols=254 Identities=15% Similarity=0.200 Sum_probs=204.1
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +|+.||+|++... .....+.+.+|++++++++|||||+++++|.+..
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~------ 88 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE------ 88 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS------
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC------
Confidence 46888999999999999999976 6899999999653 2344567899999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 89 -~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~ 163 (384)
T 4fr4_A 89 -DMFMVVDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAA 163 (384)
T ss_dssp -EEEEEECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred -EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceee
Confidence 4899999999999999998654 699999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccC-CcceeecCCCcchhhhcc---CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 636 LAEARG-KGSAEVSSPAKKTSVLAR---TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 636 ~~~~~~-~~~~~~~~~~~~pe~~~~---~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
...... .....++..|++||.+.. ..++.++|||||||++|||+||++||..................
T Consensus 164 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~-------- 235 (384)
T 4fr4_A 164 MLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETT-------- 235 (384)
T ss_dssp ECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHC--------
T ss_pred eccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhc--------
Confidence 654332 233445567888998763 45899999999999999999999999643222111111110000
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC-HHHHHHHhHhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPS-VEDTLWNLQFAT 756 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~l~~~~ 756 (769)
.......++ ..+.+++.+||+.||++||+ ++++++|+||..
T Consensus 236 ~~~~p~~~s----~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~ 277 (384)
T 4fr4_A 236 VVTYPSAWS----QEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277 (384)
T ss_dssp CCCCCTTSC----HHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTT
T ss_pred ccCCCCcCC----HHHHHHHHHHhcCCHhHhcccHHHHHcChhhhc
Confidence 011112233 34899999999999999998 999999999864
No 63
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=7.8e-41 Score=361.00 Aligned_cols=256 Identities=18% Similarity=0.210 Sum_probs=193.3
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
..+.|+..+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||++++++|.+..
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 121 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT------- 121 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSS-------
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCC-------
Confidence 4567899999999999999999976 68899999997542 3466889999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC---CceeeecCCCC
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE---NFHVKINSYNL 633 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~kl~DFGl 633 (769)
..++||||+++|+|.+++...+ .+++.++..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 122 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~ 197 (349)
T 2w4o_A 122 EISLVLELVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGL 197 (349)
T ss_dssp EEEEEECCCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-
T ss_pred eEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcc
Confidence 4899999999999999998654 689999999999999999999999 9999999999999975 88999999999
Q ss_pred chhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH--HHhhhhhccccccccccc
Q 004195 634 PLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL--VKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 634 a~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~ 710 (769)
++....... ....++..|++||.+.+..++.++|||||||++|||+||+.||....... ...+......
T Consensus 198 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~-------- 269 (349)
T 2w4o_A 198 SKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYY-------- 269 (349)
T ss_dssp ---------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCC--------
T ss_pred ccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCc--------
Confidence 976543322 22344567888999988889999999999999999999999986543221 1221111100
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
..+......+. .+.+++.+||+.||++|||+.|+++|+|+....
T Consensus 270 ~~~~~~~~~~~----~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~ 313 (349)
T 2w4o_A 270 FISPWWDEVSL----NAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKA 313 (349)
T ss_dssp CCTTTTTTSCH----HHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTT
T ss_pred cCCchhhhCCH----HHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 01111122333 488999999999999999999999999987543
No 64
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=4.3e-41 Score=369.10 Aligned_cols=261 Identities=17% Similarity=0.256 Sum_probs=209.3
Q ss_pred HHHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeec
Q 004195 472 LDELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLD 547 (769)
Q Consensus 472 ~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~ 547 (769)
+.++....++|+..+.||+|+||+||+|+.. +++.||+|+++.. .....+.+.+|+.+++.++|||||+++++|.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3455566788999999999999999999976 6899999999753 23334568899999999999999999999986
Q ss_pred cCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceee
Q 004195 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVK 627 (769)
Q Consensus 548 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~k 627 (769)
.. ..|+|||||++|+|.++++.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+|
T Consensus 141 ~~-------~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ik 208 (410)
T 3v8s_A 141 DR-------YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLK 208 (410)
T ss_dssp SS-------EEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEE
T ss_pred CC-------EEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEE
Confidence 43 489999999999999999754 589999999999999999999999 999999999999999999999
Q ss_pred ecCCCCchhhhccC---CcceeecCCCcchhhhccCC----CCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhh
Q 004195 628 INSYNLPLLAEARG---KGSAEVSSPAKKTSVLARTE----QDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQV 699 (769)
Q Consensus 628 l~DFGla~~~~~~~---~~~~~~~~~~~~pe~~~~~~----~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~ 699 (769)
|+|||+++...... .....++..|++||.+.... ++.++|||||||++|||+||++||....... ...+...
T Consensus 209 L~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~ 288 (410)
T 3v8s_A 209 LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 288 (410)
T ss_dssp ECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH
T ss_pred EeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhc
Confidence 99999997654322 12344566788899887655 7899999999999999999999997654332 2222211
Q ss_pred ccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCC--CCCHHHHHHHhHhhh
Q 004195 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKD--RPSVEDTLWNLQFAT 756 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~l~~~~ 756 (769)
.. ...-|. ....++ ++.+++.+|++.+|++ ||+++||++|+||..
T Consensus 289 ~~-------~~~~p~-~~~~s~----~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~ 335 (410)
T 3v8s_A 289 KN-------SLTFPD-DNDISK----EAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 335 (410)
T ss_dssp HH-------HCCCCT-TCCCCH----HHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCC
T ss_pred cc-------cccCCC-cccccH----HHHHHHHHHccChhhhCCCCCHHHHhcCccccC
Confidence 10 000010 112333 3889999999999988 999999999999975
No 65
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=9.9e-41 Score=349.53 Aligned_cols=254 Identities=17% Similarity=0.247 Sum_probs=203.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.++|...+.||+|+||.||+|+..++..||||+++... ...+++.+|++++++++||||+++++++.+... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~-------~ 94 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP-------I 94 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS-------E
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCC-------e
Confidence 34678889999999999999999888899999998543 345789999999999999999999999976443 8
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
++||||+++|+|.+++......+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 95 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 171 (283)
T 3gen_A 95 FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171 (283)
T ss_dssp EEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred EEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccc
Confidence 999999999999999986555799999999999999999999999 99999999999999999999999999997543
Q ss_pred ccC---CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 639 ARG---KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 639 ~~~---~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
... .....++..|++||.+....++.++||||||+++|||+| |+.||...........+.... .+.
T Consensus 172 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~----------~~~ 241 (283)
T 3gen_A 172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL----------RLY 241 (283)
T ss_dssp CHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC----------CCC
T ss_pred ccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhccc----------CCC
Confidence 221 111122335788999888889999999999999999999 999997654433222221110 111
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.....++ .+.+++.+||+.||++|||++|++++++....
T Consensus 242 ~~~~~~~----~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 242 RPHLASE----KVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp CCTTCCH----HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCcCCH----HHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 1122233 48899999999999999999999999987643
No 66
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=371.64 Aligned_cols=265 Identities=15% Similarity=0.194 Sum_probs=210.0
Q ss_pred cCHHHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeee
Q 004195 470 FTLDELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHC 545 (769)
Q Consensus 470 ~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~ 545 (769)
+++.+.....++|+..+.||+|+||.||+|+.+ +|+.||||+++... ....+.+.+|+.++.+++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 445666667889999999999999999999976 79999999997531 12234588999999999999999999999
Q ss_pred eccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce
Q 004195 546 LDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH 625 (769)
Q Consensus 546 ~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~ 625 (769)
.+.+ ..|+||||+++|+|.+++.+.+..+++..+..++.||+.||+|||+. +|+||||||+|||++.+++
T Consensus 131 ~~~~-------~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~ 200 (412)
T 2vd5_A 131 QDEN-------YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGH 200 (412)
T ss_dssp ECSS-------EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSC
T ss_pred eeCC-------EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCC
Confidence 8643 48999999999999999986545799999999999999999999998 9999999999999999999
Q ss_pred eeecCCCCchhhhccCC---cceeecCCCcchhhhc-------cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HH
Q 004195 626 VKINSYNLPLLAEARGK---GSAEVSSPAKKTSVLA-------RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VK 694 (769)
Q Consensus 626 ~kl~DFGla~~~~~~~~---~~~~~~~~~~~pe~~~-------~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~ 694 (769)
+||+|||+++....... ....++..|++||.+. ...++.++|||||||++|||+||++||....... ..
T Consensus 201 vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~ 280 (412)
T 2vd5_A 201 IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYG 280 (412)
T ss_dssp EEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred EEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHH
Confidence 99999999976543322 1234566788899876 3568999999999999999999999997654332 22
Q ss_pred hhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCC---CCHHHHHHHhHhhh
Q 004195 695 DLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDR---PSVEDTLWNLQFAT 756 (769)
Q Consensus 695 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~~l~~~~ 756 (769)
.+..... ...-|......++ ++.+++.+||. +|++| |+++|+++|+||..
T Consensus 281 ~i~~~~~-------~~~~p~~~~~~s~----~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~ 333 (412)
T 2vd5_A 281 KIVHYKE-------HLSLPLVDEGVPE----EARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFG 333 (412)
T ss_dssp HHHTHHH-------HCCCC----CCCH----HHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTT
T ss_pred HHHhccc-------CcCCCccccCCCH----HHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCC
Confidence 2221100 0001111123333 48999999999 99998 69999999999965
No 67
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.2e-40 Score=345.77 Aligned_cols=260 Identities=16% Similarity=0.149 Sum_probs=208.6
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|...+.||+|+||.||+|+.. ++..||+|++........+.+.+|++++++++||||+++++++.+.. .
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-------~ 80 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT-------D 80 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-------E
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-------e
Confidence 456888999999999999999976 58899999998766666788999999999999999999999998643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee---CCCceeeecCCCCc
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL---DENFHVKINSYNLP 634 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~kl~DFGla 634 (769)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~ 156 (277)
T 3f3z_A 81 IYLVMELCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156 (277)
T ss_dssp EEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccc
Confidence 899999999999999987543 689999999999999999999999 99999999999999 78899999999998
Q ss_pred hhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 635 LLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 635 ~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
........ ....++..|++||.+. ..++.++||||||+++|||+||+.||...........+...... ..+
T Consensus 157 ~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------~~~ 228 (277)
T 3f3z_A 157 ARFKPGKMMRTKVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFT-------FPE 228 (277)
T ss_dssp EECCTTSCBCCCCSCTTTCCHHHHT-TCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-------CCH
T ss_pred eeccCccchhccCCCCCccChHHhc-ccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC-------CCc
Confidence 65543322 2334455678888775 45999999999999999999999999765433322211111000 000
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhccc
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGL 761 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~ 761 (769)
.....++ ..+.+++.+|++.||++|||+.|+++|+||.......
T Consensus 229 ~~~~~~~----~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~~ 272 (277)
T 3f3z_A 229 KDWLNVS----PQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSS 272 (277)
T ss_dssp HHHTTSC----HHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHCCS
T ss_pred hhhhcCC----HHHHHHHHHHccCChhhCcCHHHHhcCHHHhcccccc
Confidence 0011223 3488999999999999999999999999998765543
No 68
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.4e-41 Score=369.16 Aligned_cols=255 Identities=19% Similarity=0.321 Sum_probs=205.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|...+.||+|+||.||+|++. +++.||||.++.... ...+.+.+|++++++++|||||+++++|.+...
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~------ 186 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP------ 186 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSS------
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCC------
Confidence 346778899999999999999986 799999999975421 122468899999999999999999999976433
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++||||+++|+|.++++..+..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 187 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~ 262 (377)
T 3cbl_A 187 -IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSRE 262 (377)
T ss_dssp -CEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred -cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCcee
Confidence 7999999999999999986555699999999999999999999999 999999999999999999999999999865
Q ss_pred hhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 637 AEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 637 ~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
...... .....+..|++||.+....++.++|||||||++|||+| |+.||...........+....
T Consensus 263 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~---------- 332 (377)
T 3cbl_A 263 EADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGG---------- 332 (377)
T ss_dssp CTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTC----------
T ss_pred cCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----------
Confidence 432211 11123345888999888889999999999999999999 999997655443333222111
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.......+++ .+.+++.+||+.||++|||++++++.+..+..
T Consensus 333 ~~~~~~~~~~----~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 333 RLPCPELCPD----AVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCH----HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 0111123343 48899999999999999999999999987654
No 69
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=351.66 Aligned_cols=270 Identities=14% Similarity=0.172 Sum_probs=208.0
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+... ..
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-----~~ 83 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTT-----RH 83 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTT-----CC
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCC-----ce
Confidence 46788899999999999999976 59999999997543 3345678899999999999999999999875432 24
Q ss_pred EEEEEeccCCCchhhhhcCCC--CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee----CCCceeeecCC
Q 004195 558 IYLIFEYAPNETLRSFISGPG--YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL----DENFHVKINSY 631 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl----d~~~~~kl~DF 631 (769)
.++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Df 160 (319)
T 4euu_A 84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160 (319)
T ss_dssp EEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCC
T ss_pred EEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccC
Confidence 799999999999999998533 2389999999999999999999999 99999999999999 88889999999
Q ss_pred CCchhhhccCC-cceeecCCCcchhhhc--------cCCCCCCCCeeehhHHHHHHHhCCCCCCCch-----hHHHHhhh
Q 004195 632 NLPLLAEARGK-GSAEVSSPAKKTSVLA--------RTEQDDKSDVYDIGIILIEIIVGRPITSENV-----VVLVKDLL 697 (769)
Q Consensus 632 Gla~~~~~~~~-~~~~~~~~~~~pe~~~--------~~~~~~ksDVwS~Gvil~elltG~~p~~~~~-----~~~~~~~~ 697 (769)
|+++....... ....++..|++||.+. ...++.++|||||||++|||+||+.||.... ......+.
T Consensus 161 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 240 (319)
T 4euu_A 161 GAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (319)
T ss_dssp TTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHH
T ss_pred CCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHh
Confidence 99976543332 2233455677888775 4678999999999999999999999986322 11122221
Q ss_pred hhcccc-ccccccc------c--CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 698 QVNIGT-DEARKSI------V--DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 698 ~~~~~~-~~~~~~~------~--d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...... ....... . +.......+......+.+++.+||+.||++|||++|+++|+.....
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 111000 0000000 0 0111124556778889999999999999999999999999986543
No 70
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=6.2e-41 Score=363.42 Aligned_cols=258 Identities=21% Similarity=0.219 Sum_probs=196.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|...+.||+|+||+||+|+.. +|+.||||++.... ...+.+.+|+.++++++|||||++++++.+.. .
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-------~ 90 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPT-------H 90 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSS-------E
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCC-------E
Confidence 457888999999999999999976 79999999997543 33467899999999999999999999998643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce--eeecCCCCch
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH--VKINSYNLPL 635 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~--~kl~DFGla~ 635 (769)
.++||||+++|+|.+++...+ .+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+++
T Consensus 91 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~ 166 (361)
T 3uc3_A 91 LAIIMEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSK 166 (361)
T ss_dssp EEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-
T ss_pred EEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccc
Confidence 899999999999999997543 689999999999999999999998 9999999999999987765 9999999986
Q ss_pred hhhcc-CCcceeecCCCcchhhhccCCCCCC-CCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhccccccccccccC
Q 004195 636 LAEAR-GKGSAEVSSPAKKTSVLARTEQDDK-SDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 636 ~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~k-sDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d 712 (769)
..... ......++..|++||.+.+..++.+ +|||||||++|||++|++||..... ......++....... ..
T Consensus 167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~---~~-- 241 (361)
T 3uc3_A 167 SSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY---SI-- 241 (361)
T ss_dssp --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCC---CC--
T ss_pred cccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCC---CC--
Confidence 43222 2233345667889999888777665 8999999999999999999975332 111111111100000 00
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
| .....++ .+.+++.+||+.||++|||+.|+++|+||....
T Consensus 242 ~-~~~~~s~----~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~ 282 (361)
T 3uc3_A 242 P-DDIRISP----ECCHLISRIFVADPATRISIPEIKTHSWFLKNL 282 (361)
T ss_dssp C-TTSCCCH----HHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTC
T ss_pred C-CcCCCCH----HHHHHHHHHccCChhHCcCHHHHHhCcchhcCC
Confidence 0 0012233 488999999999999999999999999996543
No 71
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2e-40 Score=347.71 Aligned_cols=254 Identities=16% Similarity=0.243 Sum_probs=198.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||.||+|+.. +|..||+|++.... ....+.+.+|++++++++||||+++++++.+.. .
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-------~ 94 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH-------N 94 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-------E
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCC-------e
Confidence 46888899999999999999975 68999999997654 334578999999999999999999999997633 4
Q ss_pred EEEEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee---CCCceeeecCC
Q 004195 558 IYLIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL---DENFHVKINSY 631 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~kl~DF 631 (769)
.++||||+++|+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Df 171 (285)
T 3is5_A 95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDF 171 (285)
T ss_dssp EEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEee
Confidence 8999999999999998852 234699999999999999999999999 99999999999999 45688999999
Q ss_pred CCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 632 NLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 632 Gla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
|+++....... ....++..|++||.+ ...++.++|||||||++|||++|+.||..................
T Consensus 172 g~a~~~~~~~~~~~~~~t~~y~aPE~~-~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~------- 243 (285)
T 3is5_A 172 GLAELFKSDEHSTNAAGTALYMAPEVF-KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPN------- 243 (285)
T ss_dssp CCCCC----------CTTGGGCCHHHH-TTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-------
T ss_pred ecceecCCcccCcCcccccCcCChHHh-ccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcc-------
Confidence 99976543322 223344567788876 467899999999999999999999999875544332222111000
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
. +......++ ++.+++.+||+.||++|||+.|+++|+||.+
T Consensus 244 ~-~~~~~~~~~----~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 244 Y-AVECRPLTP----QAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp C-CC--CCCCH----HHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred c-ccccCcCCH----HHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 0 000011233 4889999999999999999999999999863
No 72
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.7e-40 Score=369.20 Aligned_cols=253 Identities=19% Similarity=0.246 Sum_probs=206.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~------ 89 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS------ 89 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS------
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC------
Confidence 46788899999999999999976 79999999997542 234567899999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 90 -~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~ 164 (476)
T 2y94_A 90 -DIFMVMEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSN 164 (476)
T ss_dssp -EEEEEEECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred -EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchh
Confidence 4899999999999999998654 699999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccC-CcceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LAEARG-KGSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~-~~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
...... .....++..|++||.+.+..+ +.++||||+||++|||++|+.||.+.........+.... .
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~-----------~ 233 (476)
T 2y94_A 165 MMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI-----------F 233 (476)
T ss_dssp ECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTC-----------C
T ss_pred hccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC-----------c
Confidence 654332 223345667888998877665 689999999999999999999998654332222111100 0
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
......++ .+.+++.+||+.||++|||++|+++|+|+....
T Consensus 234 ~~p~~~s~----~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~~ 274 (476)
T 2y94_A 234 YTPQYLNP----SVISLLKHMLQVDPMKRATIKDIREHEWFKQDL 274 (476)
T ss_dssp CCCTTCCH----HHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTTC
T ss_pred CCCccCCH----HHHHHHHHHcCCCchhCcCHHHHHhCHHhhhcC
Confidence 01112333 488999999999999999999999999998654
No 73
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.6e-40 Score=351.97 Aligned_cols=256 Identities=15% Similarity=0.192 Sum_probs=206.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC------ChhHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS------SPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
.++|...+.||+|+||.||+|+.. +|+.||||.++..... ..+.+.+|++++++++||||+++++++.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 88 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT-- 88 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--
Confidence 456888999999999999999976 6999999999765322 2567999999999999999999999997643
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc----eee
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF----HVK 627 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~----~~k 627 (769)
..++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++ .+|
T Consensus 89 -----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~k 159 (321)
T 2a2a_A 89 -----DVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIK 159 (321)
T ss_dssp -----EEEEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEE
T ss_pred -----EEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEE
Confidence 4899999999999999998654 689999999999999999999999 999999999999999887 799
Q ss_pred ecCCCCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccc
Q 004195 628 INSYNLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEA 706 (769)
Q Consensus 628 l~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (769)
|+|||+++....... ....++..|++||...+..++.++|||||||++|||+||+.||...........+....
T Consensus 160 l~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~----- 234 (321)
T 2a2a_A 160 LIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVS----- 234 (321)
T ss_dssp ECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTC-----
T ss_pred EccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcc-----
Confidence 999999976543322 22334556788999888889999999999999999999999997654332222111100
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
...++......++ .+.+++.+||+.||++|||++|+++|+|+..
T Consensus 235 --~~~~~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~ 278 (321)
T 2a2a_A 235 --YDFDEEFFSHTSE----LAKDFIRKLLVKETRKRLTIQEALRHPWITP 278 (321)
T ss_dssp --CCCCHHHHTTCCH----HHHHHHHTTSCSSTTTSCCHHHHHHSTTTSC
T ss_pred --cccChhhhcccCH----HHHHHHHHHcCCChhhCcCHHHHhcCccccC
Confidence 0011111223333 4889999999999999999999999999863
No 74
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1e-40 Score=357.08 Aligned_cols=253 Identities=18% Similarity=0.292 Sum_probs=199.0
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCc----EEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGT----LVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~----~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|+..+.||+|+||+||+|++. +|+ .||+|.++... ....+.+.+|+.++++++||||++++++|.+..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 90 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST---- 90 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS----
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC----
Confidence 45888899999999999999964 444 36888886443 344578999999999999999999999998632
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
.++|+||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 91 ----~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~ 163 (327)
T 3poz_A 91 ----VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGL 163 (327)
T ss_dssp ----EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTH
T ss_pred ----eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcc
Confidence 6899999999999999986556799999999999999999999999 999999999999999999999999999
Q ss_pred chhhhccCCcc----eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 634 PLLAEARGKGS----AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 634 a~~~~~~~~~~----~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
++......... ..++..|++||.+.+..++.++|||||||++|||+| |+.||...........+.....
T Consensus 164 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~------ 237 (327)
T 3poz_A 164 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER------ 237 (327)
T ss_dssp HHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC------
T ss_pred eeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCC------
Confidence 97664332211 112335788999988999999999999999999999 9999976544333332221110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
......++ ..+.+++.+||+.||++||++.|+++++.....
T Consensus 238 ----~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 238 ----LPQPPICT----IDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ----CCCCTTBC----HHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred ----CCCCccCC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 11112223 348899999999999999999999999986543
No 75
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.9e-40 Score=353.26 Aligned_cols=256 Identities=16% Similarity=0.206 Sum_probs=196.0
Q ss_pred cCCCC-cCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDS-SSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~-~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
+.|.. .+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++.++ +||||+++++++.+.+
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~------- 84 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEED------- 84 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-------
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC-------
Confidence 45666 478999999999999965 7999999999876555667899999999985 7999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce---eeecCCCC
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH---VKINSYNL 633 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~---~kl~DFGl 633 (769)
..++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 160 (316)
T 2ac3_A 85 RFYLVFEKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDL 160 (316)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTC
T ss_pred EEEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccC
Confidence 4899999999999999997543 689999999999999999999999 9999999999999988776 99999999
Q ss_pred chhhhccC---------CcceeecCCCcchhhhcc-----CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH--------
Q 004195 634 PLLAEARG---------KGSAEVSSPAKKTSVLAR-----TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-------- 691 (769)
Q Consensus 634 a~~~~~~~---------~~~~~~~~~~~~pe~~~~-----~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-------- 691 (769)
++...... .....++..|++||.+.. ..++.++|||||||++|||+||++||......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~ 240 (316)
T 2ac3_A 161 GSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGE 240 (316)
T ss_dssp CC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----
T ss_pred ccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccc
Confidence 86543211 111224556788998764 45899999999999999999999999753211
Q ss_pred --------HHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 692 --------LVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 692 --------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
....+...... +........+ ..+.+++.+||+.||++|||++|+++|+|+....
T Consensus 241 ~~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~----~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~ 303 (316)
T 2ac3_A 241 ACPACQNMLFESIQEGKYE--------FPDKDWAHIS----CAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA 303 (316)
T ss_dssp CCHHHHHHHHHHHHHCCCC--------CCHHHHTTSC----HHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred cchhHHHHHHHHHhccCcc--------cCchhcccCC----HHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence 01110000000 0000011222 3488999999999999999999999999997543
No 76
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.4e-40 Score=354.07 Aligned_cols=250 Identities=16% Similarity=0.246 Sum_probs=195.9
Q ss_pred cCCCCcCccccCCceeEEEEEe----CCCcEEEEEEccccC----CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL----TDGTLVAIRSLKMSK----KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~----~~g~~vAvK~~~~~~----~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
++|+..+.||+|+||.||+|+. .+|+.||+|+++... ......+.+|++++++++||||+++++++.+.+.
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~- 95 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK- 95 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC-
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE-
Confidence 5688899999999999999996 468999999997542 1233567889999999999999999999986443
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCC
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
.++||||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 96 ------~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Df 165 (327)
T 3a62_A 96 ------LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDF 165 (327)
T ss_dssp ------EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCC
T ss_pred ------EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeC
Confidence 899999999999999997543 689999999999999999999999 9999999999999999999999999
Q ss_pred CCchhhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-Hhhhhhccccccccc
Q 004195 632 NLPLLAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARK 708 (769)
Q Consensus 632 Gla~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~ 708 (769)
|+++...... .....++..|++||.+.+..++.++|||||||++|||++|+.||........ ..+....
T Consensus 166 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~-------- 237 (327)
T 3a62_A 166 GLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK-------- 237 (327)
T ss_dssp SCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC--------
T ss_pred CcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC--------
Confidence 9986543221 1223345678899999888899999999999999999999999976543322 2221111
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
..+....++ .+.+++.+||+.||++|| +++|+++|+||..
T Consensus 238 ----~~~p~~~~~----~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~ 282 (327)
T 3a62_A 238 ----LNLPPYLTQ----EARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282 (327)
T ss_dssp ----CCCCTTSCH----HHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSS
T ss_pred ----CCCCCCCCH----HHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccC
Confidence 111122333 488999999999999999 8999999999864
No 77
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=4.7e-41 Score=358.90 Aligned_cols=274 Identities=16% Similarity=0.238 Sum_probs=204.0
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.++|+..+.||+|+||+||+|+.. ++.||||++.... .....+.+|+.++++++|||||++++++.+... .....
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~---~~~~~ 97 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTS---VDVDL 97 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS---SSEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCC---CCceE
Confidence 356888999999999999999975 7899999997542 223456778999999999999999999986432 13457
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCC-------CCCccccCccccceeeCCCceeeecCC
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI-------VPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
++||||+++|+|.++++.. .++|..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+||
T Consensus 98 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 9999999999999999754 4899999999999999999999862 348999999999999999999999999
Q ss_pred CCchhhhccCC----cceeecCCCcchhhhcc-----CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhh--c
Q 004195 632 NLPLLAEARGK----GSAEVSSPAKKTSVLAR-----TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQV--N 700 (769)
Q Consensus 632 Gla~~~~~~~~----~~~~~~~~~~~pe~~~~-----~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~--~ 700 (769)
|+++....... ....++..|++||.+.+ ..++.++|||||||++|||+||++||..........+... .
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 99965533221 12334566788998765 3456789999999999999999999865321100000000 0
Q ss_pred ccccccc-----ccccCccccCC-CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 701 IGTDEAR-----KSIVDPAVMNE-CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 701 ~~~~~~~-----~~~~d~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
....... .....|.+... .......++.+++.+||+.||++|||+.||++.++...+..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 256 HPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 0000000 00111111111 11245567999999999999999999999999999876654
No 78
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.6e-40 Score=358.11 Aligned_cols=251 Identities=17% Similarity=0.226 Sum_probs=205.2
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~ 553 (769)
.++|+..+.||+|+||.||+|+.. +|+.||||+++.. .....+.+.+|..++..+ +||||+++++++.+.+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~---- 94 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD---- 94 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS----
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC----
Confidence 457889999999999999999976 5889999999754 234456788999999988 7999999999997643
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..|+||||+++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 95 ---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~ 167 (353)
T 2i0e_A 95 ---RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGM 167 (353)
T ss_dssp ---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred ---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCc
Confidence 4899999999999999998543 689999999999999999999999 999999999999999999999999999
Q ss_pred chhhhcc--CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHH-hhhhhccccccccccc
Q 004195 634 PLLAEAR--GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVK-DLLQVNIGTDEARKSI 710 (769)
Q Consensus 634 a~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~ 710 (769)
++..... ......++..|++||.+.+..++.++|||||||++|||++|++||......... .+....
T Consensus 168 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~---------- 237 (353)
T 2i0e_A 168 CKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN---------- 237 (353)
T ss_dssp CBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC----------
T ss_pred ccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC----------
Confidence 9753221 222334556788999998889999999999999999999999999765433322 222110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
..+....++ ++.+++.+||+.||++||+ ++|+++|+||..
T Consensus 238 --~~~p~~~s~----~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~ 282 (353)
T 2i0e_A 238 --VAYPKSMSK----EAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 282 (353)
T ss_dssp --CCCCTTSCH----HHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred --CCCCCCCCH----HHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence 111122333 4889999999999999994 699999999864
No 79
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.9e-41 Score=357.65 Aligned_cols=249 Identities=18% Similarity=0.207 Sum_probs=194.0
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||+||+|+.. +|+.||||++....... ...+.+|+..+.++ +|||||+++++|.+..
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~------ 130 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG------ 130 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT------
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC------
Confidence 57999999999999999999976 79999999987543222 23455666666655 8999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+ +++|.+++...+..++|..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 131 -~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~ 205 (311)
T 3p1a_A 131 -ILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLV 205 (311)
T ss_dssp -EEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCE
T ss_pred -EEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeee
Confidence 489999999 6799998875555799999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 636 LAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 636 ~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
....... ....++..|++||.+.+ .++.++|||||||++|||++|..|+..... ...+... ...+.
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~--~~~~~~~----------~~~~~ 272 (311)
T 3p1a_A 206 ELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG--WQQLRQG----------YLPPE 272 (311)
T ss_dssp ECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH--HHHHTTT----------CCCHH
T ss_pred ecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH--HHHHhcc----------CCCcc
Confidence 5533322 22234556788997764 799999999999999999999766554321 1111110 11112
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.....++ ++.+++.+||+.||++|||++|+++|+|+.+
T Consensus 273 ~~~~~~~----~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (311)
T 3p1a_A 273 FTAGLSS----ELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310 (311)
T ss_dssp HHTTSCH----HHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred cccCCCH----HHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence 2223333 4899999999999999999999999999853
No 80
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2e-40 Score=360.27 Aligned_cols=281 Identities=17% Similarity=0.274 Sum_probs=209.7
Q ss_pred CHHHHHHHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC-----------hhHHHHHHHHHhhccCCcee
Q 004195 471 TLDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS-----------PHMYTYHIELISKLRHSNLV 539 (769)
Q Consensus 471 ~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~-----------~~~~~~Ei~~l~~l~H~nIv 539 (769)
...++....++|...+.||+|+||.||+|+..+|+.||||++....... .+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 4578888999999999999999999999998889999999997543221 16789999999999999999
Q ss_pred eEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccccee
Q 004195 540 SALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVL 619 (769)
Q Consensus 540 ~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 619 (769)
++++++..... +.....++||||++ |+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+
T Consensus 93 ~~~~~~~~~~~--~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 93 GLRDIFVHFEE--PAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL 166 (362)
T ss_dssp CCSEEEEECCT--TTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred ceeeeEEeccC--CCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence 99999875432 23456899999997 689998886666799999999999999999999999 9999999999999
Q ss_pred eCCCceeeecCCCCchhhhccCC-cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhh
Q 004195 620 LDENFHVKINSYNLPLLAEARGK-GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDL 696 (769)
Q Consensus 620 ld~~~~~kl~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~ 696 (769)
++.++.+||+|||+++....... ....++..|++||.+.+ ..++.++|||||||++|||+||++||....... ...+
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i 246 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKI 246 (362)
T ss_dssp ECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred EcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99999999999999975433322 22334455788998766 678999999999999999999999997654322 2221
Q ss_pred hhhcccccc--c--------cccccCccc---c----CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 697 LQVNIGTDE--A--------RKSIVDPAV---M----NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 697 ~~~~~~~~~--~--------~~~~~d~~~---~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
... ..... . ..+...... . ....+.....+.+++.+||+.||++|||+.|+++|+||....
T Consensus 247 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 324 (362)
T 3pg1_A 247 VEV-VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF 324 (362)
T ss_dssp HHH-HCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred HHH-cCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence 111 10000 0 000000000 0 000111234488999999999999999999999999997653
No 81
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.9e-40 Score=346.22 Aligned_cols=254 Identities=19% Similarity=0.267 Sum_probs=207.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +++.||||++... .....+.+.+|++++++++||||+++++++.+..
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 87 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK------ 87 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS------
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC------
Confidence 56888999999999999999976 6889999999643 2334567999999999999999999999997633
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++|+|.+++...+ .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 88 -~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~ 162 (284)
T 2vgo_A 88 -RIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSV 162 (284)
T ss_dssp -EEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred -EEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccc
Confidence 4899999999999999997543 689999999999999999999998 99999999999999999999999999986
Q ss_pred hhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
...........++..|++||.+.+..++.++||||||+++|||++|+.||...........+.. .+..+
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-----------~~~~~ 231 (284)
T 2vgo_A 163 HAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN-----------VDLKF 231 (284)
T ss_dssp ECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT-----------TCCCC
T ss_pred cCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhc-----------cccCC
Confidence 5543333333455667889998888899999999999999999999999976543322221110 01111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
....++ .+.+++.+|++.||++|||++|+++|+|+.....
T Consensus 232 ~~~~~~----~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~ 271 (284)
T 2vgo_A 232 PPFLSD----GSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR 271 (284)
T ss_dssp CTTSCH----HHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred CCcCCH----HHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhcc
Confidence 122333 4889999999999999999999999999986543
No 82
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.1e-40 Score=350.98 Aligned_cols=257 Identities=18% Similarity=0.260 Sum_probs=205.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|...+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.. .
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------~ 80 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTT-------H 80 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSS-------E
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCC-------E
Confidence 356888999999999999999976 79999999998655445567899999999999999999999997643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee---CCCceeeecCCCCc
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL---DENFHVKINSYNLP 634 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~kl~DFGla 634 (769)
.++||||+++++|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~ 156 (304)
T 2jam_A 81 YYLVMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLS 156 (304)
T ss_dssp EEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTT
T ss_pred EEEEEEcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcc
Confidence 899999999999999987443 689999999999999999999999 99999999999999 78899999999998
Q ss_pred hhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 635 LLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
+...........++..|++||.+.+..++.++|||||||++|||++|++||...........+..... . ....
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~------~-~~~~ 229 (304)
T 2jam_A 157 KMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY------E-FESP 229 (304)
T ss_dssp CCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCC------C-CCTT
T ss_pred eecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC------C-CCcc
Confidence 76544333333455678889998888899999999999999999999999976543332221111100 0 0111
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.....++ .+.+++.+||+.||++|||++|+++|+|+...
T Consensus 230 ~~~~~~~----~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 268 (304)
T 2jam_A 230 FWDDISE----SAKDFICHLLEKDPNERYTCEKALSHPWIDGN 268 (304)
T ss_dssp TTTTSCH----HHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred ccccCCH----HHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence 1122333 48899999999999999999999999998754
No 83
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=356.65 Aligned_cols=270 Identities=20% Similarity=0.320 Sum_probs=201.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC-hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS-PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~-~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||+||+|+.. +++.||||+++...... ...+.+|++++++++||||+++++++.+...
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------- 74 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKS------- 74 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSC-------
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCE-------
Confidence 46888999999999999999976 79999999997543222 2345679999999999999999999986443
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||++ |+|.+++...+..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 75 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 150 (324)
T 3mtl_A 75 LTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAK 150 (324)
T ss_dssp EEEEEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC
T ss_pred EEEEecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccc
Confidence 899999997 699999886666799999999999999999999999 9999999999999999999999999998654
Q ss_pred hccC--CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc--ccccccccC
Q 004195 638 EARG--KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT--DEARKSIVD 712 (769)
Q Consensus 638 ~~~~--~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~d 712 (769)
.... .....++..|++||.+.+ ..++.++|||||||++|||+||++||...........+...... ...+.....
T Consensus 151 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 230 (324)
T 3mtl_A 151 SIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILS 230 (324)
T ss_dssp ------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred cCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhc
Confidence 3222 122234556788998765 56899999999999999999999999765543322222111111 111111110
Q ss_pred ---------ccccCC----CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 713 ---------PAVMNE----CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 713 ---------~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
+..... ..+.....+.+++.+||+.||++|||++|+++|+||....+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 291 (324)
T 3mtl_A 231 NEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER 291 (324)
T ss_dssp CHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred chhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence 000000 001123348899999999999999999999999999865443
No 84
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=362.56 Aligned_cols=257 Identities=19% Similarity=0.284 Sum_probs=203.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
++|...+.||+|+||.||+|++. +++.||||+++.... .....+.+|+.++++++|||||++++++.+...
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~-- 148 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-- 148 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC--
Confidence 46778899999999999999943 467899999974322 223568899999999999999999999976443
Q ss_pred CCcceEEEEEeccCCCchhhhhcCC------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc--
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGP------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF-- 624 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-- 624 (769)
.++||||+++|+|.+++... ...+++.+++.++.|+++||+|||+. +|+||||||+|||++.++
T Consensus 149 -----~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~ 220 (367)
T 3l9p_A 149 -----RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPG 220 (367)
T ss_dssp -----CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTT
T ss_pred -----CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCC
Confidence 69999999999999999732 13589999999999999999999999 999999999999999554
Q ss_pred -eeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhh
Q 004195 625 -HVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQ 698 (769)
Q Consensus 625 -~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~ 698 (769)
.+||+|||+++....... ....++..|++||.+.+..++.++|||||||++|||+| |++||...........+.
T Consensus 221 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~ 300 (367)
T 3l9p_A 221 RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 300 (367)
T ss_dssp CCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred ceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 599999999975533221 11223345788999888899999999999999999998 999997765443333222
Q ss_pred hccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 699 VNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 699 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
... .+.....+++ .+.+++.+||+.||++|||+.||++++++..+..+
T Consensus 301 ~~~----------~~~~~~~~~~----~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 301 SGG----------RMDPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp TTC----------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred cCC----------CCCCCccCCH----HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 111 0111123333 48899999999999999999999999998876443
No 85
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=8.1e-41 Score=358.44 Aligned_cols=258 Identities=17% Similarity=0.304 Sum_probs=200.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCC-----
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLD----- 551 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~----- 551 (769)
.++|+..+.||+|+||.||+|+.. +|+.||||+++..... ..+.+.+|++++++++|||||+++++|.+....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457888999999999999999986 7999999999755432 346799999999999999999999998654320
Q ss_pred ---------------------------------------------CCCcceEEEEEeccCCCchhhhhcCCC--CCCCHH
Q 004195 552 ---------------------------------------------DPSISIIYLIFEYAPNETLRSFISGPG--YKLTWV 584 (769)
Q Consensus 552 ---------------------------------------------~~~~~~~~lV~Ey~~~gsL~~~l~~~~--~~l~~~ 584 (769)
.......++|||||++|+|.+++.... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 011234799999999999999998543 345777
Q ss_pred HHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccC--------------CcceeecCC
Q 004195 585 QRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARG--------------KGSAEVSSP 650 (769)
Q Consensus 585 ~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~--------------~~~~~~~~~ 650 (769)
.+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...... .....++..
T Consensus 165 ~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 8999999999999999999 99999999999999999999999999997654321 112235566
Q ss_pred CcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHH
Q 004195 651 AKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMEL 730 (769)
Q Consensus 651 ~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~l 730 (769)
|++||.+.+..++.++|||||||++|||++|..|+..... ....... ...+ .........+.++
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~-~~~~~~~-----------~~~~----~~~~~~~~~~~~l 305 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR-IITDVRN-----------LKFP----LLFTQKYPQEHMM 305 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH-HHHHHHT-----------TCCC----HHHHHHCHHHHHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH-HHHHhhc-----------cCCC----cccccCChhHHHH
Confidence 7889999888999999999999999999999876532111 1111000 0001 0112233457899
Q ss_pred HHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 731 CLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 731 i~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
+.+||+.||++|||++|+++|+||.
T Consensus 306 i~~~l~~~p~~Rps~~~~l~~~~f~ 330 (332)
T 3qd2_B 306 VQDMLSPSPTERPEATDIIENAIFE 330 (332)
T ss_dssp HHHHHCSSGGGSCCHHHHHHSTTCC
T ss_pred HHHHccCCCCcCCCHHHHhhchhhh
Confidence 9999999999999999999999985
No 86
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.7e-40 Score=355.73 Aligned_cols=251 Identities=16% Similarity=0.200 Sum_probs=201.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|+..+.||+|+||.||+|+.. +|+.||||+++...... .+.+.+|+.++.++ +|||||++++++.+..
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~----- 83 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES----- 83 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC-----
Confidence 46888999999999999999976 68999999998654333 24578899999988 8999999999997643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+++|+|.+++.+.+ .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 84 --~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a 157 (345)
T 3a8x_A 84 --RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMC 157 (345)
T ss_dssp --EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGC
T ss_pred --EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccc
Confidence 4899999999999999997543 689999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhcc--CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh---------HHHHhhhhhcccc
Q 004195 635 LLAEAR--GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV---------VLVKDLLQVNIGT 703 (769)
Q Consensus 635 ~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~---------~~~~~~~~~~~~~ 703 (769)
+..... ......++..|++||.+.+..++.++|||||||++|||++|++||..... ......+.. .
T Consensus 158 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~---~ 234 (345)
T 3a8x_A 158 KEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE---K 234 (345)
T ss_dssp BCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHH---C
T ss_pred ccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHc---C
Confidence 753221 22233455678889999888999999999999999999999999964210 111110000 0
Q ss_pred ccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCH------HHHHHHhHhhh
Q 004195 704 DEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSV------EDTLWNLQFAT 756 (769)
Q Consensus 704 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~~l~~~~ 756 (769)
...+....+ ..+.+++.+||+.||++||++ +|+++|+||..
T Consensus 235 --------~~~~p~~~s----~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~ 281 (345)
T 3a8x_A 235 --------QIRIPRSLS----VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281 (345)
T ss_dssp --------CCCCCTTSC----HHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred --------CCCCCCCCC----HHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence 011112233 348899999999999999995 89999999964
No 87
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=9.3e-40 Score=346.23 Aligned_cols=256 Identities=20% Similarity=0.300 Sum_probs=199.5
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||.||+|+.. ..+|+|.++...... .+.+.+|++++++++||||+++++++....
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------- 105 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDN-------- 105 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--------
T ss_pred cceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCc--------
Confidence 46888999999999999999864 359999887543322 357889999999999999999999875422
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.++||||+++|+|.+++......+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 106 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~ 182 (307)
T 3lb7_A 106 LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC-
T ss_pred EEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceec
Confidence 6899999999999999986666899999999999999999999999 9999999999999999999999999999654
Q ss_pred hcc----CCcceeecCCCcchhhhc---cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhcccccccccc
Q 004195 638 EAR----GKGSAEVSSPAKKTSVLA---RTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 638 ~~~----~~~~~~~~~~~~~pe~~~---~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~ 709 (769)
... ......++..|++||.+. ...++.++|||||||++|||+||+.||...... .....+....... .
T Consensus 183 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~-~--- 258 (307)
T 3lb7_A 183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASP-D--- 258 (307)
T ss_dssp -----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCC-C---
T ss_pred ccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCc-c---
Confidence 321 112234556788899875 566889999999999999999999999754322 1211111111100 0
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.+.+...+++ .+.+++.+||+.||++||++.|++++++...+.
T Consensus 259 --~~~~~~~~~~----~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 259 --LSKLYKNCPK----AMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp --STTSCSSSCH----HHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred --hhhhhcCCcH----HHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 0112223444 488999999999999999999999999987543
No 88
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=357.91 Aligned_cols=253 Identities=17% Similarity=0.264 Sum_probs=195.9
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC--hhHHHHHHHHHhhccC--CceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRH--SNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H--~nIv~l~~~~~~~~~~~~~~ 555 (769)
+.|+..+.||+|+||.||+|...+++.||||++....... .+.+.+|++++++++| |||+++++++.+..
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~------ 82 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ------ 82 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS------
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC------
Confidence 4588899999999999999998889999999997553322 2568899999999976 99999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++|||| .+|+|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+|||++ ++.+||+|||+++
T Consensus 83 -~~~lv~e~-~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~ 155 (343)
T 3dbq_A 83 -YIYMVMEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIAN 155 (343)
T ss_dssp -EEEEEECC-CSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSC
T ss_pred -EEEEEEeC-CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccccc
Confidence 48999995 5789999998554 689999999999999999999999 999999999999997 6789999999997
Q ss_pred hhhccCC----cceeecCCCcchhhhcc-----------CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhc
Q 004195 636 LAEARGK----GSAEVSSPAKKTSVLAR-----------TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVN 700 (769)
Q Consensus 636 ~~~~~~~----~~~~~~~~~~~pe~~~~-----------~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~ 700 (769)
....... ....++..|++||.+.. ..++.++|||||||++|||++|+.||........ ....
T Consensus 156 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~-- 232 (343)
T 3dbq_A 156 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS-KLHA-- 232 (343)
T ss_dssp CC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-HHHH--
T ss_pred ccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH-HHHH--
Confidence 6543221 22345667888998754 6789999999999999999999999975322111 1000
Q ss_pred cccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 701 IGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 701 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+.++......+......+.+++.+||+.||++|||+.|+++|+|+..+
T Consensus 233 ---------~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~ 280 (343)
T 3dbq_A 233 ---------IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 280 (343)
T ss_dssp ---------HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred ---------HhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccccc
Confidence 111111111111112348899999999999999999999999999754
No 89
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4.1e-40 Score=344.95 Aligned_cols=262 Identities=16% Similarity=0.201 Sum_probs=207.6
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|+..+.||+|+||.||+|... +|+.||+|++....... .+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 78 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES------ 78 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS------
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC------
Confidence 567889999999999999999976 68999999997653322 356889999999999999999999997643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce---eeecCCC
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH---VKINSYN 632 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~---~kl~DFG 632 (769)
..++||||+++++|.+.+.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 79 -~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg 153 (284)
T 3kk8_A 79 -FHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFG 153 (284)
T ss_dssp -EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCT
T ss_pred -EEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeece
Confidence 3799999999999998887543 689999999999999999999999 9999999999999976655 9999999
Q ss_pred CchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 633 LPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 633 la~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
++........ ....++..|++||.+.+..++.++||||||+++|||++|+.||...........+..... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~------~~- 226 (284)
T 3kk8_A 154 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY------DY- 226 (284)
T ss_dssp TCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC------CC-
T ss_pred eeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccc------cC-
Confidence 9965543322 223345567889999888899999999999999999999999976544333222211100 00
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcccc
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLK 762 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~~ 762 (769)
.......+++ .+.+++.+||+.||++|||++|+++|+|+....+...
T Consensus 227 ~~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~~ 273 (284)
T 3kk8_A 227 PSPEWDTVTP----EAKSLIDSMLTVNPKKRITADQALKVPWICNRERVAS 273 (284)
T ss_dssp CTTTTTTSCH----HHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCGGG
T ss_pred CchhhcccCH----HHHHHHHHHcccChhhCCCHHHHhcCccccCChhHHh
Confidence 0111122333 4889999999999999999999999999986544333
No 90
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4.1e-40 Score=346.19 Aligned_cols=255 Identities=20% Similarity=0.230 Sum_probs=200.0
Q ss_pred CCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
|...+.||+|+||.||+|+.. ++..||+|.+...... ..+.+.+|+.++++++||||+++++++.+... .....
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~---~~~~~ 104 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK---GKKCI 104 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESS---SCEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccC---CCceE
Confidence 556778999999999999975 6889999999755322 23568899999999999999999999875322 23568
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCC--ccccCccccceeeC-CCceeeecCCCCch
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG--VFSNNLKITDVLLD-ENFHVKINSYNLPL 635 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlKp~NILld-~~~~~kl~DFGla~ 635 (769)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. + |+||||||+||+++ +++.+||+|||++.
T Consensus 105 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 99999999999999997543 689999999999999999999998 7 99999999999997 78999999999997
Q ss_pred hhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhccccccccccccCcc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
...........++..|++||.+. ..++.++|||||||++|||+||+.||..... ......+.... ..+.
T Consensus 181 ~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~---------~~~~ 250 (290)
T 1t4h_A 181 LKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV---------KPAS 250 (290)
T ss_dssp GCCTTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTC---------CCGG
T ss_pred cccccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccC---------Cccc
Confidence 65444333334556778888765 5699999999999999999999999975322 11111111100 0111
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.....++ ++.+++.+||+.||++|||++|+++|+||..+
T Consensus 251 ~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~ 289 (290)
T 1t4h_A 251 FDKVAIP----EVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp GGGCCCH----HHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred cCCCCCH----HHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence 1122233 38899999999999999999999999998754
No 91
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=9.9e-41 Score=372.74 Aligned_cols=252 Identities=17% Similarity=0.216 Sum_probs=197.6
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|+..+.||+|+||.||+|+.. +|+.||||+++.. .......+.+|+.++++++||||++++++|.+.+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~----- 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD----- 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETT-----
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC-----
Confidence 457889999999999999999975 7999999999754 2233456788999999999999999999998643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhccccc-CCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..++||||+++|+|.+++.... .+++..+..++.|+++||+|||+ . +|+||||||+|||++.++.+||+|||+
T Consensus 222 --~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~ 295 (446)
T 4ejn_A 222 --RLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGL 295 (446)
T ss_dssp --EEEEEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCC
T ss_pred --EEEEEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCC
Confidence 3899999999999999997543 68999999999999999999998 7 999999999999999999999999999
Q ss_pred chhhhcc--CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 634 PLLAEAR--GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 634 a~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
++..... ......++..|++||.+.+..++.++|||||||++|||+||+.||...........+...
T Consensus 296 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~----------- 364 (446)
T 4ejn_A 296 CKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME----------- 364 (446)
T ss_dssp CCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-----------
T ss_pred ceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhC-----------
Confidence 9753222 122334556788999998899999999999999999999999999765543332222110
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
...+....++ ++.+++.+||+.||++|| +++|+++|+||..
T Consensus 365 ~~~~p~~~~~----~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~ 410 (446)
T 4ejn_A 365 EIRFPRTLGP----EAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 410 (446)
T ss_dssp CCCCCTTSCH----HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred CCCCCccCCH----HHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccC
Confidence 0111122333 488999999999999999 9999999999975
No 92
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=5e-40 Score=367.64 Aligned_cols=269 Identities=16% Similarity=0.209 Sum_probs=201.7
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|+..+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+.+++.++|||||++++++...... ...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~-~~~ 139 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL-EEF 139 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCST-TTC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcc-ccC
Confidence 467888999999999999999965 69999999997542 22245788999999999999999999999754321 123
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...|+||||+++ +|.+.+.. .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred CeEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 568999999975 57666653 489999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccc--cc-----
Q 004195 636 LAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTD--EA----- 706 (769)
Q Consensus 636 ~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~--~~----- 706 (769)
....... ....++..|++||.+.+..|+.++||||+||++|||++|++||.+..... ...++.. .+.+ +.
T Consensus 213 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~-lg~p~~~~~~~~~ 291 (464)
T 3ttj_A 213 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ-LGTPCPEFMKKLQ 291 (464)
T ss_dssp ----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH-HCSCCHHHHTTSC
T ss_pred ecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh-cCCCCHHHHHHcc
Confidence 6654322 23345667889999999999999999999999999999999997654322 2222111 1100 00
Q ss_pred -----------------cccccCccccCCC---CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 707 -----------------RKSIVDPAVMNEC---SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 707 -----------------~~~~~d~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
+...+........ ......++.+|+.+||+.||++|||++|+++|+||..
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~ 361 (464)
T 3ttj_A 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 361 (464)
T ss_dssp HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence 0000000000000 1122567899999999999999999999999999974
No 93
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.2e-40 Score=347.68 Aligned_cols=255 Identities=19% Similarity=0.303 Sum_probs=199.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|+..+.||+|+||.||+|+.. +++.||+|.+....... .+.+.+|+.++++++||||+++++++.+.+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~----- 84 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD----- 84 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS-----
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC-----
Confidence 356888999999999999999965 68999999997554333 256889999999999999999999987643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+++|+|.+++...+ .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 85 --~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 158 (294)
T 4eqm_A 85 --CYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIA 158 (294)
T ss_dssp --EEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSS
T ss_pred --eEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCc
Confidence 4899999999999999998554 689999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhccC---CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHH-hhhhhccccccccccc
Q 004195 635 LLAEARG---KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVK-DLLQVNIGTDEARKSI 710 (769)
Q Consensus 635 ~~~~~~~---~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~ 710 (769)
+...... .....++..|++||.+.+..++.++|||||||++|||+||+.||......... ....... ..
T Consensus 159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~---~~---- 231 (294)
T 4eqm_A 159 KALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSV---PN---- 231 (294)
T ss_dssp TTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCC---CC----
T ss_pred cccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccC---CC----
Confidence 7654322 12233566788999998888999999999999999999999999765432211 1111100 00
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCC-CHHHHHHHhHhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRP-SVEDTLWNLQFA 755 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~l~~~ 755 (769)
..+.....+++ .+.+++.+|++.||++|| +++++.+.+...
T Consensus 232 ~~~~~~~~~~~----~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 232 VTTDVRKDIPQ----SLSNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp HHHHSCTTSCH----HHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred cchhcccCCCH----HHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 00111223333 488999999999999999 777777776654
No 94
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=346.38 Aligned_cols=256 Identities=17% Similarity=0.285 Sum_probs=187.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 84 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN----- 84 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS-----
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC-----
Confidence 356888999999999999999974 79999999996432 233467899999999999999999999997643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+++++|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 85 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~ 159 (278)
T 3cok_A 85 --YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLA 159 (278)
T ss_dssp --EEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTC
T ss_pred --eEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecce
Confidence 48999999999999999987656799999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 635 LLAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 635 ~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
....... .....++..|++||...+..++.++||||||+++|||+||++||.......... .... .+
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~--------~~ 228 (278)
T 3cok_A 160 TQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN---KVVL--------AD 228 (278)
T ss_dssp EECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------CCS--------SC
T ss_pred eeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH---HHhh--------cc
Confidence 6543221 112334556788998888889999999999999999999999987543211110 0000 01
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
......++. ++.+++.+||+.||++|||++|+++|+|+.....
T Consensus 229 ~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 271 (278)
T 3cok_A 229 YEMPSFLSI----EAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSS 271 (278)
T ss_dssp CCCCTTSCH----HHHHHHHHHSCSSGGGSCCHHHHTTSTTTC----
T ss_pred cCCccccCH----HHHHHHHHHcccCHhhCCCHHHHhcCccccCCCC
Confidence 111122333 4889999999999999999999999999976543
No 95
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.8e-40 Score=355.53 Aligned_cols=263 Identities=15% Similarity=0.137 Sum_probs=203.4
Q ss_pred HHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc-----CCCChhHHHHHHHHHhhccCCceeeEeeeeecc
Q 004195 475 LKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS-----KKSSPHMYTYHIELISKLRHSNLVSALGHCLDF 548 (769)
Q Consensus 475 l~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~-----~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~ 548 (769)
+....++|...+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|++++++++|||||+++++|.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 4566778999999999999999999975 6889999998653 223346789999999999999999999999764
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcCC---------------------------------------CCCCCHHHHHHH
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISGP---------------------------------------GYKLTWVQRIAA 589 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~---------------------------------------~~~l~~~~~~~i 589 (769)
. ..++||||+++|+|.+++... ...+++..+..+
T Consensus 101 ~-------~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 173 (345)
T 3hko_A 101 Q-------YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNI 173 (345)
T ss_dssp S-------EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHH
T ss_pred C-------eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHH
Confidence 3 489999999999999998510 112467788899
Q ss_pred HHHHHHHhcccccCCCCCccccCccccceeeCCCc--eeeecCCCCchhhhccCC------cceeecCCCcchhhhcc--
Q 004195 590 AIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF--HVKINSYNLPLLAEARGK------GSAEVSSPAKKTSVLAR-- 659 (769)
Q Consensus 590 ~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~--~~kl~DFGla~~~~~~~~------~~~~~~~~~~~pe~~~~-- 659 (769)
+.|+++||+|||+. +|+||||||+||+++.++ .+||+|||+++....... ....++..|++||.+.+
T Consensus 174 ~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 250 (345)
T 3hko_A 174 MRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTN 250 (345)
T ss_dssp HHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSS
T ss_pred HHHHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCC
Confidence 99999999999999 999999999999998776 899999999975433211 22234556788998764
Q ss_pred CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-HhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCC
Q 004195 660 TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNE 738 (769)
Q Consensus 660 ~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~d 738 (769)
..++.++|||||||++|||+||+.||........ .......... .......+++ .+.+++.+||+.|
T Consensus 251 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~----~~~~li~~~l~~~ 318 (345)
T 3hko_A 251 ESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF--------ENPNYNVLSP----LARDLLSNLLNRN 318 (345)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCT--------TSGGGGGSCH----HHHHHHHHHSCSC
T ss_pred CCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhccccc--------CCcccccCCH----HHHHHHHHHcCCC
Confidence 6789999999999999999999999976543322 2222111100 0111112333 4889999999999
Q ss_pred CCCCCCHHHHHHHhHhhhhhc
Q 004195 739 PKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 739 P~~RPs~~evl~~l~~~~~~~ 759 (769)
|++|||+.|+++|+|+..-..
T Consensus 319 p~~Rps~~~~l~hp~~~~~~~ 339 (345)
T 3hko_A 319 VDERFDAMRALQHPWISQFSD 339 (345)
T ss_dssp TTTSCCHHHHHHSHHHHTTSS
T ss_pred hhHCCCHHHHhcChhhccChH
Confidence 999999999999999986544
No 96
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.6e-40 Score=356.56 Aligned_cols=250 Identities=22% Similarity=0.305 Sum_probs=200.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
+.|...+.||+|+||.||+|+.. +|+.||||++....... .+.+.+|++++++++|||||+++++|.+..
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------ 127 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH------ 127 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT------
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC------
Confidence 45888899999999999999964 79999999997553332 246889999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||++ |+|.+++......+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 128 -~~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 202 (348)
T 1u5q_A 128 -TAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSAS 202 (348)
T ss_dssp -EEEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCB
T ss_pred -eEEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCce
Confidence 4899999997 688888864445799999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCCcceeecCCCcchhhhc---cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhcccccccccccc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLA---RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 711 (769)
..... ....++..|++||.+. ...++.++|||||||++|||+||++||....... ........
T Consensus 203 ~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~----------- 269 (348)
T 1u5q_A 203 IMAPA--NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE----------- 269 (348)
T ss_dssp SSSSB--CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-----------
T ss_pred ecCCC--CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC-----------
Confidence 65432 2233456678899874 4678999999999999999999999987543222 11111110
Q ss_pred Cccc-cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 712 DPAV-MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 712 d~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+.. ...+++ .+.+++.+||+.||++|||++|+++|+|+...
T Consensus 270 ~~~~~~~~~~~----~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~ 312 (348)
T 1u5q_A 270 SPALQSGHWSE----YFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 312 (348)
T ss_dssp CCCCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred CCCCCCCCCCH----HHHHHHHHHcccChhhCcCHHHHhhChhhhcc
Confidence 1111 122333 48899999999999999999999999998654
No 97
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=8.1e-41 Score=363.01 Aligned_cols=268 Identities=15% Similarity=0.214 Sum_probs=206.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.. .
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------~ 105 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-------E 105 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT-------E
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC-------E
Confidence 56888999999999999999976 789999999975422 22357889999999999999999999998643 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhccccc-CCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||++..
T Consensus 106 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 181 (360)
T 3eqc_A 106 ISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 181 (360)
T ss_dssp EEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEECTTCCEEECCCCCCHH
T ss_pred EEEEEECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHhC---CEEcCCccHHHEEECCCCCEEEEECCCCcc
Confidence 899999999999999998543 68999999999999999999998 4 799999999999999999999999999976
Q ss_pred hhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccc-----------
Q 004195 637 AEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDE----------- 705 (769)
Q Consensus 637 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~----------- 705 (769)
..........++..|++||.+.+..++.++|||||||++|||+||+.||....................
T Consensus 182 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 182 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp HHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred cccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence 654444444556778899999888999999999999999999999999976544332221110000000
Q ss_pred ------------------ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 706 ------------------ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 706 ------------------~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
....+...............++.+++.+||+.||++|||++|+++|+|+....
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 332 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 332 (360)
T ss_dssp ------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred CcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcch
Confidence 00000000000000111233588999999999999999999999999997643
No 98
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.8e-40 Score=349.28 Aligned_cols=267 Identities=19% Similarity=0.279 Sum_probs=201.1
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|+||+||+|+.. +|+.||||++....... .+.+.+|++++++++||||+++++++.+..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------- 75 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR------- 75 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-------
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCC-------
Confidence 57888999999999999999976 69999999987543222 356789999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 151 (311)
T 4agu_A 76 RLHLVFEYCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARL 151 (311)
T ss_dssp EEEEEEECCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred eEEEEEEeCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchh
Confidence 4899999999999999887544 689999999999999999999999 999999999999999999999999999966
Q ss_pred hhccCC--cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccc---------
Q 004195 637 AEARGK--GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTD--------- 704 (769)
Q Consensus 637 ~~~~~~--~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~--------- 704 (769)
...... ....++..|++||.+.+ ..++.++|||||||++|||+||++||...........+.......
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (311)
T 4agu_A 152 LTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFS 231 (311)
T ss_dssp CC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred ccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccc
Confidence 542221 22334556788998765 568999999999999999999999997654332222111111100
Q ss_pred --cccc--cccCccccCC---CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 705 --EARK--SIVDPAVMNE---CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 705 --~~~~--~~~d~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.... ...++..... ..+.....+.+++.+||+.||++|||++|+++|+||...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 291 (311)
T 4agu_A 232 TNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENI 291 (311)
T ss_dssp TCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTC
T ss_pred cccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhc
Confidence 0000 0011110000 001123348899999999999999999999999999754
No 99
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.6e-40 Score=342.89 Aligned_cols=251 Identities=21% Similarity=0.326 Sum_probs=191.6
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCC----CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKK----SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~----~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|+..+.||+|+||.||+|+.. |+.||||+++.... ...+.+.+|++++++++||||+++++++.+..
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 79 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP------ 79 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-------
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC------
Confidence 46788899999999999999975 88999999975432 22467899999999999999999999997643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC--------Cceee
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE--------NFHVK 627 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~--------~~~~k 627 (769)
..++||||+++++|.+++... .+++..+..++.|+++||+|||+....+|+||||||+||+++. ++.+|
T Consensus 80 -~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~k 156 (271)
T 3dtc_A 80 -NLCLVMEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILK 156 (271)
T ss_dssp --CEEEEECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEE
T ss_pred -ceEEEEEcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceE
Confidence 379999999999999999743 6899999999999999999999982222999999999999986 67899
Q ss_pred ecCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccc
Q 004195 628 INSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEAR 707 (769)
Q Consensus 628 l~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (769)
|+|||+++...........++..|++||...+..++.++||||||+++|||+||+.||...............
T Consensus 157 l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------- 229 (271)
T 3dtc_A 157 ITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN------- 229 (271)
T ss_dssp ECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTS-------
T ss_pred EccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcC-------
Confidence 9999999765544443444566778899988888999999999999999999999999765433222211110
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.........+++ .+.+++.+||+.||++|||+.|+++++.
T Consensus 230 --~~~~~~~~~~~~----~~~~li~~~l~~~p~~Rps~~e~l~~L~ 269 (271)
T 3dtc_A 230 --KLALPIPSTCPE----PFAKLMEDCWNPDPHSRPSFTNILDQLT 269 (271)
T ss_dssp --CCCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCCCCCCcccCH----HHHHHHHHHhcCCcccCcCHHHHHHHHh
Confidence 011112223333 4889999999999999999999999986
No 100
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=9.5e-41 Score=356.75 Aligned_cols=251 Identities=15% Similarity=0.177 Sum_probs=182.7
Q ss_pred cCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcceEEEEE
Q 004195 485 SSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSISIIYLIF 562 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~~~lV~ 562 (769)
.+.||+|+||.||+|+.. +|+.||||++... ....+.+|+.++++++ ||||+++++++.+.. ..++||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~-------~~~lv~ 85 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQL-------HTFLVM 85 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-------EEEEEE
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC-------EEEEEE
Confidence 478999999999999976 6899999999743 3467889999999997 999999999998643 489999
Q ss_pred eccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc---eeeecCCCCchhhhc
Q 004195 563 EYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF---HVKINSYNLPLLAEA 639 (769)
Q Consensus 563 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~---~~kl~DFGla~~~~~ 639 (769)
||+++|+|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||+++.++ .+||+|||+++....
T Consensus 86 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 161 (325)
T 3kn6_A 86 ELLNGGELFERIKKKK-HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP 161 (325)
T ss_dssp CCCCSCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC
T ss_pred EccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCC
Confidence 9999999999998554 699999999999999999999999 999999999999997665 899999999975433
Q ss_pred cC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH----HHhhhhhccccccccccccCc
Q 004195 640 RG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL----VKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 640 ~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~d~ 713 (769)
.. .....++..|++||.+.+..++.++|||||||++|||++|++||....... ......... .. +.
T Consensus 162 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~-~~-------~~ 233 (325)
T 3kn6_A 162 DNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIK-KG-------DF 233 (325)
T ss_dssp ----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHT-TT-------CC
T ss_pred CCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHH-cC-------CC
Confidence 22 123334567888999988899999999999999999999999997533210 001110000 00 00
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
............++.+++.+||+.||++|||++|+++|+|+...
T Consensus 234 ~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~ 277 (325)
T 3kn6_A 234 SFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDG 277 (325)
T ss_dssp CCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTT
T ss_pred CCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccC
Confidence 00000001123458999999999999999999999999999754
No 101
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.4e-40 Score=363.20 Aligned_cols=270 Identities=15% Similarity=0.226 Sum_probs=201.2
Q ss_pred hcCCCCcCccccC--CceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDA--SHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G--~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
.++|+..+.||+| +||.||+|+.. +|+.||||+++...... .+.+.+|++++++++|||||++++++.+..
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 99 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN---- 99 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC----
Confidence 3468889999999 99999999976 79999999997653322 356788999999999999999999998643
Q ss_pred CcceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
..++|||||++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 100 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg 173 (389)
T 3gni_B 100 ---ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLR 173 (389)
T ss_dssp ---EEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGG
T ss_pred ---EEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccc
Confidence 489999999999999999733 34699999999999999999999999 99999999999999999999999999
Q ss_pred CchhhhccC---------CcceeecCCCcchhhhcc--CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhc
Q 004195 633 LPLLAEARG---------KGSAEVSSPAKKTSVLAR--TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVN 700 (769)
Q Consensus 633 la~~~~~~~---------~~~~~~~~~~~~pe~~~~--~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~ 700 (769)
.+....... .....++..|++||.+.+ ..++.++|||||||++|||+||++||.+.... .........
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 253 (389)
T 3gni_B 174 SNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGT 253 (389)
T ss_dssp GCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----
T ss_pred cceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC
Confidence 875432111 111233445788998876 57899999999999999999999999753321 111111000
Q ss_pred cccc--------cc-------------ccccc---Ccc------ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHH
Q 004195 701 IGTD--------EA-------------RKSIV---DPA------VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLW 750 (769)
Q Consensus 701 ~~~~--------~~-------------~~~~~---d~~------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 750 (769)
.... .. ..+.. .+. .....+......+.+++.+||+.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 254 VPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ----------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 0000 00 00000 000 000112223455899999999999999999999999
Q ss_pred HhHhhhhh
Q 004195 751 NLQFATQI 758 (769)
Q Consensus 751 ~l~~~~~~ 758 (769)
|+||....
T Consensus 334 hp~f~~~~ 341 (389)
T 3gni_B 334 HSFFKQIK 341 (389)
T ss_dssp SGGGGGC-
T ss_pred CHHHHHHh
Confidence 99997543
No 102
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.2e-40 Score=350.07 Aligned_cols=256 Identities=19% Similarity=0.292 Sum_probs=197.0
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhh--ccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISK--LRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~--l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|+..+.||+|+||+||+|+. +|+.||||++... ....+.+|.+++.. ++||||+++++++.+... ...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~---~~~ 79 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRH---SST 79 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEET---TEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccC---CCc
Confidence 45788899999999999999998 6899999998643 34566777777766 799999999999875332 234
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccc--------cCCCCCccccCccccceeeCCCceeee
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLH--------TGIVPGVFSNNLKITDVLLDENFHVKI 628 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDlKp~NILld~~~~~kl 628 (769)
..++||||+++|+|.++++.. .+++..+.+++.|+++||+||| +. +|+||||||+|||++.++.+||
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl 154 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCI 154 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEE
T ss_pred eeEEehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEE
Confidence 589999999999999999754 6999999999999999999999 66 9999999999999999999999
Q ss_pred cCCCCchhhhccCC------cceeecCCCcchhhhccC------CCCCCCCeeehhHHHHHHHhC----------CCCCC
Q 004195 629 NSYNLPLLAEARGK------GSAEVSSPAKKTSVLART------EQDDKSDVYDIGIILIEIIVG----------RPITS 686 (769)
Q Consensus 629 ~DFGla~~~~~~~~------~~~~~~~~~~~pe~~~~~------~~~~ksDVwS~Gvil~elltG----------~~p~~ 686 (769)
+|||+++....... ....++..|++||.+.+. .++.++|||||||++|||+|| ++||.
T Consensus 155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~ 234 (301)
T 3q4u_A 155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234 (301)
T ss_dssp CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccc
Confidence 99999865433221 112345567889988765 345799999999999999999 77775
Q ss_pred Cch-----hHHHHhhhhhccccccccccccCccccC-CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 687 ENV-----VVLVKDLLQVNIGTDEARKSIVDPAVMN-ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 687 ~~~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
... .......... . ...+.... ..+......+.+++.+||+.||++|||+.||++.+..+
T Consensus 235 ~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 235 DVVPNDPSFEDMRKVVCV----D-----QQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTSCSSCCHHHHHHHHTT----S-----CCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCCCcchhhhhHHHhc----c-----CCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 421 1111111100 0 01111111 12234667799999999999999999999999998754
No 103
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.6e-40 Score=358.06 Aligned_cols=257 Identities=19% Similarity=0.317 Sum_probs=204.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeC--------CCcEEEEEEccccCCC-ChhHHHHHHHHHhhc-cCCceeeEeeeeecc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT--------DGTLVAIRSLKMSKKS-SPHMYTYHIELISKL-RHSNLVSALGHCLDF 548 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~--------~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~ 548 (769)
.++|...+.||+|+||.||+|+.. ++..||||+++..... ..+.+.+|+++++++ +|||||+++++|.+.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 357888899999999999999852 2457999999754221 235688999999999 899999999999764
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcCCC---------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCc
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISGPG---------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNL 613 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl 613 (769)
+. .++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||
T Consensus 148 ~~-------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dl 217 (382)
T 3tt0_A 148 GP-------LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDL 217 (382)
T ss_dssp SS-------CEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred Cc-------eEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCC
Confidence 43 799999999999999997332 3589999999999999999999999 9999999
Q ss_pred cccceeeCCCceeeecCCCCchhhhccC----CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCc
Q 004195 614 KITDVLLDENFHVKINSYNLPLLAEARG----KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSEN 688 (769)
Q Consensus 614 Kp~NILld~~~~~kl~DFGla~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~ 688 (769)
||+|||+++++.+||+|||+++...... ......+..|++||.+.+..++.++|||||||++|||+| |+.||...
T Consensus 218 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~ 297 (382)
T 3tt0_A 218 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 297 (382)
T ss_dssp CGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999997654322 112223345788999988899999999999999999999 99999765
Q ss_pred hhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 689 VVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
........+.... .+.....+++ ++.+++.+||+.||++|||++|++++++.+....
T Consensus 298 ~~~~~~~~~~~~~----------~~~~~~~~~~----~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 298 PVEELFKLLKEGH----------RMDKPSNCTN----ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp CHHHHHHHHHTTC----------CCCCCSSCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHcCC----------CCCCCccCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 5443333222111 1111223444 4889999999999999999999999998775443
No 104
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=4.5e-40 Score=349.54 Aligned_cols=261 Identities=16% Similarity=0.249 Sum_probs=202.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCCh---hHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSP---HMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~---~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|+..+.||+|+||.||+|+.. +++.||||+++....... +.+.+|++++++++||||+++++++..... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~---~ 87 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP---A 87 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEET---T
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCC---C
Confidence 357888999999999999999964 799999999986543332 468899999999999999999999876432 1
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
....++||||+++|+|.+++...+ .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 88 ~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 88 GPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred CcccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 234699999999999999997544 689999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhccCC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 635 LLAEARGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 635 ~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
+....... ....++..|++||.+.+..++.++|||||||++|||+||+.||..................
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~------ 237 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI------ 237 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCC------
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCC------
Confidence 76543221 1223466788999998889999999999999999999999999765433221111110000
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
........+++ ++.+++.+||+.||++||++.+++++.|+...
T Consensus 238 -~~~~~~~~~~~----~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 238 -PPSARHEGLSA----DLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp -CHHHHSTTCCH----HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred -CcccccCCCCH----HHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 00011122333 48899999999999999999999999998754
No 105
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.2e-39 Score=365.63 Aligned_cols=271 Identities=18% Similarity=0.304 Sum_probs=190.0
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|+..+.||+|+||+||+|+.. +|+.||||++...... ..+.+.+|++++++++|||||++++++.....+ ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--~~ 129 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVE--KF 129 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTT--TC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcc--cC
Confidence 367999999999999999999976 7999999999754222 235688999999999999999999999654321 23
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...|+||||+. |+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 130 ~~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 130 DELYVVLEIAD-SDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLAR 204 (458)
T ss_dssp CCEEEEECCCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred ceEEEEEeccc-cchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccch
Confidence 45899999985 79999998654 699999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccC-----------------------------CcceeecCCCcchhhh-ccCCCCCCCCeeehhHHHHHHHh-----
Q 004195 636 LAEARG-----------------------------KGSAEVSSPAKKTSVL-ARTEQDDKSDVYDIGIILIEIIV----- 680 (769)
Q Consensus 636 ~~~~~~-----------------------------~~~~~~~~~~~~pe~~-~~~~~~~ksDVwS~Gvil~ellt----- 680 (769)
...... .....++..|++||.+ ....++.++||||||||+|||+|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~ 284 (458)
T 3rp9_A 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKEN 284 (458)
T ss_dssp CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTT
T ss_pred hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccc
Confidence 653221 1112335567889975 45679999999999999999999
Q ss_pred ------CCCCCCCchh---------------------HHHHhhhhhccccc--ccccc-----------ccCcc---ccC
Q 004195 681 ------GRPITSENVV---------------------VLVKDLLQVNIGTD--EARKS-----------IVDPA---VMN 717 (769)
Q Consensus 681 ------G~~p~~~~~~---------------------~~~~~~~~~~~~~~--~~~~~-----------~~d~~---~~~ 717 (769)
|+++|.+... .....+... .+.. +.+.. .+... -..
T Consensus 285 ~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (458)
T 3rp9_A 285 VAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNI-LGTPSEEDIEALEKEDAKRYIRIFPKREGTDLA 363 (458)
T ss_dssp CSSGGGCCCSCC--------------------CHHHHHHHHHHHHH-HCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGG
T ss_pred ccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHH-cCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHH
Confidence 5666644221 111111100 0000 00000 00000 000
Q ss_pred CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 718 ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 718 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...+....++.+|+.+||+.||++|||++|+++|+||...
T Consensus 364 ~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~ 403 (458)
T 3rp9_A 364 ERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV 403 (458)
T ss_dssp GGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred HHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhc
Confidence 0111123458899999999999999999999999999764
No 106
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.7e-40 Score=367.82 Aligned_cols=253 Identities=20% Similarity=0.314 Sum_probs=205.3
Q ss_pred HhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
..++|...+.||+|+||.||+|++.++..||||+++... ...+.|.+|++++++++|||||++++++... .
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~--------~ 256 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKE--------P 256 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECSS--------S
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeCC--------c
Confidence 456788889999999999999999888899999998643 3567899999999999999999999998632 2
Q ss_pred EEEEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++|||||++|+|.++++... ..+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 257 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~ 333 (454)
T 1qcf_A 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARV 333 (454)
T ss_dssp CEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGG
T ss_pred cEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceE
Confidence 699999999999999998432 3588999999999999999999999 999999999999999999999999999976
Q ss_pred hhccC---CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 637 AEARG---KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 637 ~~~~~---~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
..... ......+..|++||.+....++.++|||||||++|||+| |+.||...........+.... .
T Consensus 334 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~----------~ 403 (454)
T 1qcf_A 334 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY----------R 403 (454)
T ss_dssp BCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTC----------C
T ss_pred cCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----------C
Confidence 53221 111222345788999988899999999999999999999 999997654433322222111 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
......+++ ++.+++.+||+.||++|||+++|++.+....
T Consensus 404 ~~~~~~~~~----~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 404 MPRPENCPE----ELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp CCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CCCCCCCCH----HHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 111123344 4889999999999999999999999988653
No 107
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.3e-39 Score=341.78 Aligned_cols=250 Identities=18% Similarity=0.338 Sum_probs=197.6
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCCh-------hHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSP-------HMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~-------~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
++|+..+.||+|+||.||+|+.. +++.||||++........ +.+.+|++++++++||||+++++++.+.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 95 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--- 95 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT---
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC---
Confidence 56888899999999999999975 799999999975533221 5789999999999999999999998642
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCC--ccccCccccceeeCCCce----
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG--VFSNNLKITDVLLDENFH---- 625 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlKp~NILld~~~~---- 625 (769)
.++||||+++|+|.+++......+++..+..++.|++.||+|||+. + |+||||||+||+++.++.
T Consensus 96 ------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~ 166 (287)
T 4f0f_A 96 ------PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPV 166 (287)
T ss_dssp ------TEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSC
T ss_pred ------CeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCce
Confidence 2699999999999999986666899999999999999999999998 7 999999999999988776
Q ss_pred -eeecCCCCchhhhccCCcceeecCCCcchhhhc--cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc
Q 004195 626 -VKINSYNLPLLAEARGKGSAEVSSPAKKTSVLA--RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG 702 (769)
Q Consensus 626 -~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~ 702 (769)
+||+|||+++..... .....++..|.+||.+. ...++.++|||||||++|||++|+.||...............
T Consensus 167 ~~kl~Dfg~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-- 243 (287)
T 4f0f_A 167 CAKVADFGLSQQSVHS-VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR-- 243 (287)
T ss_dssp CEEECCCTTCBCCSSC-EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHH--
T ss_pred eEEeCCCCcccccccc-ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHh--
Confidence 999999998644322 12233456678898873 445789999999999999999999999754322211111000
Q ss_pred cccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhH
Q 004195 703 TDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQ 753 (769)
Q Consensus 703 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~ 753 (769)
.....+.....+++ .+.+++.+||+.||++|||++|+++.+.
T Consensus 244 -----~~~~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~~L~ 285 (287)
T 4f0f_A 244 -----EEGLRPTIPEDCPP----RLRNVIELCWSGDPKKRPHFSYIVKELS 285 (287)
T ss_dssp -----HSCCCCCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----ccCCCCCCCcccCH----HHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 00111222233444 4899999999999999999999999875
No 108
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=8.5e-40 Score=342.39 Aligned_cols=259 Identities=16% Similarity=0.200 Sum_probs=204.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC------ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS------SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
++|...+.||+|+||.||+|+.. +|+.||||.++..... ..+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 81 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--- 81 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS---
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC---
Confidence 46888999999999999999976 6999999999754321 3567999999999999999999999998643
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc----eeee
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF----HVKI 628 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~----~~kl 628 (769)
..++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++ .+||
T Consensus 82 ----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl 153 (283)
T 3bhy_A 82 ----DVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKL 153 (283)
T ss_dssp ----EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEE
T ss_pred ----eEEEEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEE
Confidence 4899999999999999997543 689999999999999999999999 999999999999998877 8999
Q ss_pred cCCCCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccc
Q 004195 629 NSYNLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEAR 707 (769)
Q Consensus 629 ~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (769)
+|||++........ ....++..|.+||......++.++||||||+++|||++|+.||...........+....
T Consensus 154 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------ 227 (283)
T 3bhy_A 154 IDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVN------ 227 (283)
T ss_dssp CCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTC------
T ss_pred EecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcc------
Confidence 99999865533221 22234456788999888889999999999999999999999997654332222111100
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
...++......++ .+.+++.+||+.||++|||+.|+++|+|+......
T Consensus 228 -~~~~~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 275 (283)
T 3bhy_A 228 -YDFDEEYFSNTSE----LAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275 (283)
T ss_dssp -CCCCHHHHTTCCH----HHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred -cCCcchhcccCCH----HHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence 0011111122333 48899999999999999999999999999865443
No 109
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.9e-40 Score=358.64 Aligned_cols=273 Identities=17% Similarity=0.221 Sum_probs=206.8
Q ss_pred cCHHHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-----CCceeeEee
Q 004195 470 FTLDELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-----HSNLVSALG 543 (769)
Q Consensus 470 ~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-----H~nIv~l~~ 543 (769)
+++.+.....++|...+.||+|+||+||+|+.. +++.||||+++.. ....+.+.+|++++++++ |||||++++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~ 103 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHG 103 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence 444444556788999999999999999999975 7899999999742 223456788999999986 999999999
Q ss_pred eeeccCCCCCCcceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC
Q 004195 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE 622 (769)
Q Consensus 544 ~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~ 622 (769)
++...+ ..++||||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 104 ~~~~~~-------~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~ 172 (360)
T 3llt_A 104 KFMYYD-------HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDD 172 (360)
T ss_dssp EEEETT-------EEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESC
T ss_pred eeeECC-------eeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcc
Confidence 998643 489999999 89999999743 23589999999999999999999999 9999999999999975
Q ss_pred -------------------------CceeeecCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHH
Q 004195 623 -------------------------NFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIE 677 (769)
Q Consensus 623 -------------------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~e 677 (769)
++.+||+|||+++...... ....++..|++||.+.+..++.++|||||||++||
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 251 (360)
T 3llt_A 173 PYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251 (360)
T ss_dssp TTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred ccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC-cCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence 7889999999997654322 23344567889999988899999999999999999
Q ss_pred HHhCCCCCCCchhHHHHhhhhhcccc-cccc---------ccccCc-----cccCCCC----------------HHHHHH
Q 004195 678 IIVGRPITSENVVVLVKDLLQVNIGT-DEAR---------KSIVDP-----AVMNECS----------------DESLKR 726 (769)
Q Consensus 678 lltG~~p~~~~~~~~~~~~~~~~~~~-~~~~---------~~~~d~-----~~~~~~~----------------~~~~~~ 726 (769)
|+||++||...........+...... .... ...++. ....... ......
T Consensus 252 ll~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (360)
T 3llt_A 252 LYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHEL 331 (360)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHH
T ss_pred HHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHH
Confidence 99999999765433222211111110 0000 000000 0000000 001145
Q ss_pred HHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 727 MMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 727 l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
+.+++.+||+.||++|||++|+++|+||.
T Consensus 332 l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 332 FCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred HHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 78999999999999999999999999973
No 110
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.4e-40 Score=353.96 Aligned_cols=248 Identities=15% Similarity=0.202 Sum_probs=203.0
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--------ChhHHHHHHHHHhhccCCceeeEeeeeecc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--------SPHMYTYHIELISKLRHSNLVSALGHCLDF 548 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--------~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~ 548 (769)
..++|...+.||+|+||.||+|+.. +|+.||||+++..... ..+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4567999999999999999999965 7899999999765321 234678899999999999999999999764
Q ss_pred CCCCCCcceEEEEEeccCCC-chhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceee
Q 004195 549 SLDDPSISIIYLIFEYAPNE-TLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVK 627 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~g-sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~k 627 (769)
. ..++||||+.+| +|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 102 ~-------~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~k 170 (335)
T 3dls_A 102 G-------FFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIK 170 (335)
T ss_dssp S-------EEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEE
T ss_pred C-------EEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEE
Confidence 3 489999999777 9999998654 699999999999999999999999 999999999999999999999
Q ss_pred ecCCCCchhhhccCC-cceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccc
Q 004195 628 INSYNLPLLAEARGK-GSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDE 705 (769)
Q Consensus 628 l~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (769)
|+|||+++....... ....++..|++||.+.+..+ +.++|||||||++|||++|+.||...... ...
T Consensus 171 L~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~------ 239 (335)
T 3dls_A 171 LIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-----VEA------ 239 (335)
T ss_dssp ECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-----TTT------
T ss_pred EeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-----Hhh------
Confidence 999999976544332 22334567788998877776 78999999999999999999999753210 000
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 706 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...+ ...+++ ++.+++.+||+.||++|||++|+++|+|+...
T Consensus 240 ----~~~~--~~~~~~----~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~ 281 (335)
T 3dls_A 240 ----AIHP--PYLVSK----ELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP 281 (335)
T ss_dssp ----CCCC--SSCCCH----HHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred ----ccCC--CcccCH----HHHHHHHHHccCChhhCcCHHHHhcCccccCC
Confidence 0000 112333 38899999999999999999999999998653
No 111
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=4.2e-40 Score=367.84 Aligned_cols=257 Identities=24% Similarity=0.349 Sum_probs=202.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.++|...+.||+|+||.||+|++.++..||||+++... ...++|.+|++++++++||||+++++++.+ . ..
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~-------~~ 253 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E-------PI 253 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-S-------SC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C-------ce
Confidence 45677889999999999999999888889999998643 346789999999999999999999999865 2 26
Q ss_pred EEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 559 YLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
++||||+++|+|.+++.. .+..+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 254 ~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 330 (452)
T 1fmk_A 254 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLI 330 (452)
T ss_dssp EEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--
T ss_pred EEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceec
Confidence 999999999999999973 223689999999999999999999999 9999999999999999999999999999765
Q ss_pred hccCCc---ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 638 EARGKG---SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 638 ~~~~~~---~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
...... ....+..|++||.+....++.++|||||||++|||+| |+.||...........+.... ..
T Consensus 331 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~----------~~ 400 (452)
T 1fmk_A 331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----------RM 400 (452)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC----------CC
T ss_pred CCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----------CC
Confidence 432211 1122345788999888899999999999999999999 899997654333322221110 11
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhccc
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGL 761 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~ 761 (769)
.....+++ .+.+++.+||+.||++|||++++++.+.........
T Consensus 401 ~~~~~~~~----~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~ 444 (452)
T 1fmk_A 401 PCPPECPE----SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444 (452)
T ss_dssp CCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred CCCCCCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCc
Confidence 11123333 488999999999999999999999998865443333
No 112
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.2e-39 Score=363.98 Aligned_cols=251 Identities=19% Similarity=0.306 Sum_probs=201.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.++|...+.||+|+||.||+|++. |+.||||+++... ..+.|.+|++++++++|||||+++++|.+.. ...
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~ 262 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK------GGL 262 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTT------SCE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCC------Cce
Confidence 356778899999999999999985 7899999997543 4578999999999999999999999987532 138
Q ss_pred EEEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 559 YLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
++|||||++|+|.+++...+ ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 263 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 339 (450)
T 1k9a_A 263 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 339 (450)
T ss_dssp EEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccc
Confidence 99999999999999998433 2479999999999999999999999 9999999999999999999999999998754
Q ss_pred hccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 638 EARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 638 ~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
..... ....+..|++||.+....++.++|||||||++|||+| |+.||.......+...+... ..+...
T Consensus 340 ~~~~~-~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~----------~~~~~p 408 (450)
T 1k9a_A 340 SSTQD-TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG----------YKMDAP 408 (450)
T ss_dssp C-------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTT----------CCCCCC
T ss_pred ccccc-CCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC----------CCCCCC
Confidence 32221 1233456889999988999999999999999999999 99998764432222212111 011112
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..+++ .+.+++.+||+.||++|||+.++++.+..+.
T Consensus 409 ~~~~~----~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 409 DGCPP----AVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp TTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CcCCH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 23444 4889999999999999999999999987654
No 113
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=3.3e-40 Score=357.98 Aligned_cols=264 Identities=19% Similarity=0.262 Sum_probs=206.7
Q ss_pred CHHHHHHHhcCCCCcCccccCCceeEEEEEe------CCCcEEEEEEccccCCC-ChhHHHHHHHHHhhc-cCCceeeEe
Q 004195 471 TLDELKEATDCFDSSSFMCDASHGQIYKGKL------TDGTLVAIRSLKMSKKS-SPHMYTYHIELISKL-RHSNLVSAL 542 (769)
Q Consensus 471 ~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~nIv~l~ 542 (769)
...+.....++|...+.||+|+||.||+|++ .+++.||||+++..... ..+.+.+|++++.++ +|||||+++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 4445555678899999999999999999983 24689999999754222 235689999999999 799999999
Q ss_pred eeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCC-------------------------------------------
Q 004195 543 GHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGY------------------------------------------- 579 (769)
Q Consensus 543 ~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~------------------------------------------- 579 (769)
++|.+.+. ..++||||+++|+|.+++.....
T Consensus 93 ~~~~~~~~------~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (359)
T 3vhe_A 93 GACTKPGG------PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSG 166 (359)
T ss_dssp EEECSTTS------CCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------
T ss_pred eeeecCCC------ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccc
Confidence 99976332 37999999999999999974321
Q ss_pred ----------------------CCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 580 ----------------------KLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 580 ----------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
.+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 243 (359)
T 3vhe_A 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDI 243 (359)
T ss_dssp -----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCT
T ss_pred cccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeee
Confidence 289999999999999999999999 9999999999999999999999999999755
Q ss_pred hccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchh-HHHHhhhhhcccccccccccc
Q 004195 638 EARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVV-VLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 638 ~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 711 (769)
..... ....++..|++||.+.+..++.++|||||||++|||+| |++||..... ......+... .
T Consensus 244 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~----------~ 313 (359)
T 3vhe_A 244 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG----------T 313 (359)
T ss_dssp TSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHT----------C
T ss_pred cccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcC----------C
Confidence 33221 22334456889999888899999999999999999999 9999875432 1121111110 0
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+.....+++ ++.+++.+||+.||++|||+.|+++|+....+
T Consensus 314 ~~~~~~~~~~----~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 314 RMRAPDYTTP----EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCH----HHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 1111122333 48899999999999999999999999987644
No 114
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3e-40 Score=361.72 Aligned_cols=251 Identities=17% Similarity=0.263 Sum_probs=195.8
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCC--ChhHHHHHHHHHhhcc--CCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKS--SPHMYTYHIELISKLR--HSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~--H~nIv~l~~~~~~~~~~~~~~ 555 (769)
+.|...+.||+|+||.||+|...+++.||||++...... ..+.+.+|++++++++ |||||++++++...+
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~------ 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ------ 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS------
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC------
Confidence 358889999999999999999888999999999755332 2357899999999996 599999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||| +.+++|.+++.... .+++.++..++.||++||+|||+. +|+||||||+|||++ ++.+||+|||+++
T Consensus 130 -~~~lv~E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~ 202 (390)
T 2zmd_A 130 -YIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIAN 202 (390)
T ss_dssp -EEEEEEE-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSC
T ss_pred -EEEEEEe-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccc
Confidence 3899999 56789999998554 689999999999999999999999 999999999999996 5889999999997
Q ss_pred hhhccC----CcceeecCCCcchhhhcc-----------CCCCCCCCeeehhHHHHHHHhCCCCCCCchh--HHHHhhhh
Q 004195 636 LAEARG----KGSAEVSSPAKKTSVLAR-----------TEQDDKSDVYDIGIILIEIIVGRPITSENVV--VLVKDLLQ 698 (769)
Q Consensus 636 ~~~~~~----~~~~~~~~~~~~pe~~~~-----------~~~~~ksDVwS~Gvil~elltG~~p~~~~~~--~~~~~~~~ 698 (769)
...... .....++..|++||.+.+ ..++.++|||||||++|||++|++||..... ......+
T Consensus 203 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~- 281 (390)
T 2zmd_A 203 QMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII- 281 (390)
T ss_dssp CC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH-
T ss_pred cccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHh-
Confidence 654322 122345567788998754 3689999999999999999999999975321 1111111
Q ss_pred hccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 699 VNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 699 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
++......+......+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 282 -------------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~ 327 (390)
T 2zmd_A 282 -------------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 327 (390)
T ss_dssp -------------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred -------------CccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcccc
Confidence 1111111111112348899999999999999999999999999754
No 115
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=9.1e-40 Score=352.16 Aligned_cols=257 Identities=20% Similarity=0.275 Sum_probs=205.0
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFS 549 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~ 549 (769)
...++|...+.||+|+||.||+|+.. +++.||||+++..... ..+.+.+|++++++++||||++++++|.+..
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34578999999999999999999974 3489999999754321 2357899999999999999999999997644
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCC-----------------------CCCCCHHHHHHHHHHHHHHhcccccCCCC
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGP-----------------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVP 606 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~-----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ 606 (769)
. .++||||+++|+|.+++... ...+++.+++.++.|+++||+|||+.
T Consensus 124 ~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~--- 193 (343)
T 1luf_A 124 P-------MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER--- 193 (343)
T ss_dssp S-------CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred c-------eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence 3 79999999999999999742 14689999999999999999999999
Q ss_pred CccccCccccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-C
Q 004195 607 GVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-G 681 (769)
Q Consensus 607 ~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G 681 (769)
+|+||||||+||+++.++.+||+|||+++....... ....++..|++||.+....++.++|||||||++|||+| |
T Consensus 194 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 273 (343)
T 1luf_A 194 KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 273 (343)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred CeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcC
Confidence 999999999999999999999999999976533221 12223445788999888899999999999999999999 9
Q ss_pred CCCCCCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 682 RPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 682 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+.||...........+.... .+.....+++ .+.+++.+||+.||++|||+.|+++++....+
T Consensus 274 ~~p~~~~~~~~~~~~~~~~~----------~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 274 LQPYYGMAHEEVIYYVRDGN----------ILACPENCPL----ELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp CCTTTTSCHHHHHHHHHTTC----------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred CCcCCCCChHHHHHHHhCCC----------cCCCCCCCCH----HHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 99987654433322221100 0111123333 48899999999999999999999999987644
No 116
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.8e-40 Score=355.17 Aligned_cols=256 Identities=18% Similarity=0.204 Sum_probs=199.8
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
..++|+..+.||+|+||.||+|+.. +|+.||||++..... ...+|++++.++ +||||+++++++.+..
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~------ 89 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGK------ 89 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSS------
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCC------
Confidence 4567899999999999999999976 689999999975432 345788899888 7999999999997643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC----ceeeecCC
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN----FHVKINSY 631 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~----~~~kl~DF 631 (769)
..++||||+++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+|||+.++ +.+||+||
T Consensus 90 -~~~lv~E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Df 164 (342)
T 2qr7_A 90 -YVYVVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDF 164 (342)
T ss_dssp -EEEEEECCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCC
T ss_pred -EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEEC
Confidence 4899999999999999998654 699999999999999999999999 99999999999998433 35999999
Q ss_pred CCchhhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 632 NLPLLAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 632 Gla~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
|+++...... .....++..|++||.+.+..++.++|||||||++|||++|++||..........+........ ..
T Consensus 165 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~---~~ 241 (342)
T 2qr7_A 165 GFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGK---FS 241 (342)
T ss_dssp TTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCC---CC
T ss_pred CCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCC---cc
Confidence 9997553322 223345667889999887778999999999999999999999997532111111111100000 00
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.........+ ..+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 242 -~~~~~~~~~s----~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~ 283 (342)
T 2qr7_A 242 -LSGGYWNSVS----DTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH 283 (342)
T ss_dssp -CCSTTTTTSC----HHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred -cCccccccCC----HHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence 0111112233 34889999999999999999999999999964
No 117
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=6.8e-40 Score=351.02 Aligned_cols=269 Identities=18% Similarity=0.273 Sum_probs=197.3
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
...++|...+.||+|+||+||+|+.. +|+.||||+++..... ..+.+.+|++++++++||||+++++++.+..
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 106 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNH---- 106 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETT----
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCC----
Confidence 34567999999999999999999965 7999999999755322 2356789999999999999999999998643
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee-----CCCceeee
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL-----DENFHVKI 628 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl-----d~~~~~kl 628 (769)
..++||||++ |+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||+ ++++.+||
T Consensus 107 ---~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl 178 (329)
T 3gbz_A 107 ---RLHLIFEYAE-NDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKI 178 (329)
T ss_dssp ---EEEEEEECCS-EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEE
T ss_pred ---EEEEEEecCC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEE
Confidence 4899999997 59999998554 589999999999999999999999 99999999999999 45566999
Q ss_pred cCCCCchhhhccC--CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhc-ccc
Q 004195 629 NSYNLPLLAEARG--KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVN-IGT 703 (769)
Q Consensus 629 ~DFGla~~~~~~~--~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~-~~~ 703 (769)
+|||+++...... .....++..|++||.+.+. .++.++|||||||++|||++|++||....... ........ ...
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 258 (329)
T 3gbz_A 179 GDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPD 258 (329)
T ss_dssp CCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred CcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCc
Confidence 9999997654322 1223345678889988764 48999999999999999999999997654322 22221110 011
Q ss_pred cccccccc--------CccccCCC-----CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 704 DEARKSIV--------DPAVMNEC-----SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 704 ~~~~~~~~--------d~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...+.... .+...... ......++.+++.+||+.||++|||++|+++|+||...
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 325 (329)
T 3gbz_A 259 DTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN 325 (329)
T ss_dssp TTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSS
T ss_pred hhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCC
Confidence 00000000 00000000 00122458899999999999999999999999999754
No 118
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-39 Score=352.25 Aligned_cols=270 Identities=19% Similarity=0.279 Sum_probs=200.0
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-----ChhHHHHHHHHHhhccCCceeeEeeeeeccCC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-----SPHMYTYHIELISKLRHSNLVSALGHCLDFSL 550 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~ 550 (769)
...++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+...
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34568999999999999999999976 6999999999754221 13468899999999999999999999976433
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecC
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINS 630 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~D 630 (769)
.++||||+++ +|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 87 -------~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~D 155 (346)
T 1ua2_A 87 -------ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLAD 155 (346)
T ss_dssp -------CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred -------eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEe
Confidence 7999999985 89999887666789999999999999999999999 999999999999999999999999
Q ss_pred CCCchhhhccC--CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhc-ccccc
Q 004195 631 YNLPLLAEARG--KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVN-IGTDE 705 (769)
Q Consensus 631 FGla~~~~~~~--~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~-~~~~~ 705 (769)
||+++...... .....++..|++||.+.+. .++.++|||||||++|||++|++||....... ...+.... .....
T Consensus 156 fg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~ 235 (346)
T 1ua2_A 156 FGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEE 235 (346)
T ss_dssp CGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTT
T ss_pred cccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChh
Confidence 99997654322 2223445667889987654 58999999999999999999999987654322 22222211 11111
Q ss_pred cccccc---C---ccccCCCC-----HHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 706 ARKSIV---D---PAVMNECS-----DESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 706 ~~~~~~---d---~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+.+.. + .......+ ......+.+++.+||+.||++|||++|+++|+||...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~ 298 (346)
T 1ua2_A 236 QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR 298 (346)
T ss_dssp TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcC
Confidence 111110 0 00000001 1123458999999999999999999999999999753
No 119
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.6e-40 Score=359.32 Aligned_cols=274 Identities=15% Similarity=0.234 Sum_probs=199.8
Q ss_pred HHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC--
Q 004195 476 KEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD-- 552 (769)
Q Consensus 476 ~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~-- 552 (769)
....++|...+.||+|+||+||+|+.. +|+.||||++.... ....+|+++++.++|||||++++++.......
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 345678999999999999999999964 79999999986442 23347999999999999999999986543210
Q ss_pred -----------------------------CCcceEEEEEeccCCCchhhhhc---CCCCCCCHHHHHHHHHHHHHHhccc
Q 004195 553 -----------------------------PSISIIYLIFEYAPNETLRSFIS---GPGYKLTWVQRIAAAIAIVKGVQFL 600 (769)
Q Consensus 553 -----------------------------~~~~~~~lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yL 600 (769)
......++||||++ |+|.+.+. .....+++..+..++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 22345789999998 58877765 2334799999999999999999999
Q ss_pred ccCCCCCccccCccccceeeC-CCceeeecCCCCchhhhccC-CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHH
Q 004195 601 HTGIVPGVFSNNLKITDVLLD-ENFHVKINSYNLPLLAEARG-KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIE 677 (769)
Q Consensus 601 H~~~~~~ivHrDlKp~NILld-~~~~~kl~DFGla~~~~~~~-~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~e 677 (769)
|+. +|+||||||+||+++ .++.+||+|||+++...... .....++..|++||.+.+. .++.++||||+||++||
T Consensus 158 H~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 158 HSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp HTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred HHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence 998 999999999999998 68999999999997553332 2233345567889987664 58999999999999999
Q ss_pred HHhCCCCCCCchhH-HHHhhhhhcccc-cccc-------ccccCcccc-----CCCCHHHHHHHHHHHHHcCcCCCCCCC
Q 004195 678 IIVGRPITSENVVV-LVKDLLQVNIGT-DEAR-------KSIVDPAVM-----NECSDESLKRMMELCLRCLSNEPKDRP 743 (769)
Q Consensus 678 lltG~~p~~~~~~~-~~~~~~~~~~~~-~~~~-------~~~~d~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RP 743 (769)
|++|++||...... ....++...... .+.+ .+..-|... ...+...+..+.+++.+||+.||++||
T Consensus 235 ll~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 314 (383)
T 3eb0_A 235 LILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI 314 (383)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence 99999999865432 222222211100 0000 000000000 001112234489999999999999999
Q ss_pred CHHHHHHHhHhhhh
Q 004195 744 SVEDTLWNLQFATQ 757 (769)
Q Consensus 744 s~~evl~~l~~~~~ 757 (769)
|+.|+++|+||...
T Consensus 315 t~~e~l~hp~f~~~ 328 (383)
T 3eb0_A 315 NPYEAMAHPFFDHL 328 (383)
T ss_dssp CHHHHHTSGGGHHH
T ss_pred CHHHHhcCHHHHHH
Confidence 99999999999754
No 120
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=7.3e-40 Score=346.30 Aligned_cols=258 Identities=19% Similarity=0.284 Sum_probs=201.7
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
..+.|+..+.||+|+||.||+|+.. +|+.||+|++........+.+.+|++++++++||||+++++++.+..
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 89 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG------- 89 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC--------
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC-------
Confidence 3457888999999999999999976 68999999998766666788999999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++++|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 90 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 166 (302)
T 2j7t_A 90 KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAK 166 (302)
T ss_dssp CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHH
T ss_pred eEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcc
Confidence 38999999999999999875445799999999999999999999999 999999999999999999999999998754
Q ss_pred hhcc--CCcceeecCCCcchhhh-----ccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 637 AEAR--GKGSAEVSSPAKKTSVL-----ARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 637 ~~~~--~~~~~~~~~~~~~pe~~-----~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
.... ......++..|.+||.. ....++.++|||||||++|||+||++|+............... .. ..
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~---~~ 241 (302)
T 2j7t_A 167 NLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS--DP---PT 241 (302)
T ss_dssp HHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS--CC---CC
T ss_pred ccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhcc--CC---cc
Confidence 3211 12223345567788876 3567899999999999999999999998764432221111100 00 00
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.. ....++ ..+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 242 ~~---~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 282 (302)
T 2j7t_A 242 LL---TPSKWS----VEFRDFLKIALDKNPETRPSAAQLLEHPFVSSI 282 (302)
T ss_dssp CS---SGGGSC----HHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTC
T ss_pred cC---CccccC----HHHHHHHHHHcccChhhCCCHHHHhcChHHhhh
Confidence 00 011223 348899999999999999999999999998753
No 121
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=7.1e-40 Score=342.73 Aligned_cols=255 Identities=17% Similarity=0.247 Sum_probs=193.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeCC----CcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTD----GTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~----g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
.++|+..+.||+|+||.||+|+... +..||+|.++.... ...+.+.+|+.++++++||||+++++++.+.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 88 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN----- 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccC-----
Confidence 3568888999999999999999642 45799999875422 2235688999999999999999999998532
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 89 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 162 (281)
T 1mp8_A 89 ---PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGL 162 (281)
T ss_dssp ---SCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---
T ss_pred ---ccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccc
Confidence 26899999999999999986555799999999999999999999999 999999999999999999999999999
Q ss_pred chhhhccCCc---ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 634 PLLAEARGKG---SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 634 a~~~~~~~~~---~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
++........ ....+..|++||......++.++|||||||++|||++ |++||...........+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~--------- 233 (281)
T 1mp8_A 163 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--------- 233 (281)
T ss_dssp ----------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT---------
T ss_pred ccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcC---------
Confidence 9765433211 1122235788999888899999999999999999997 99998764433222211110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
..+.....+++ .+.+++.+||+.||++|||+.|++++++...+.
T Consensus 234 -~~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 234 -ERLPMPPNCPP----TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp -CCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CCCCCCCCCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 00111223344 488999999999999999999999999876543
No 122
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=8.7e-40 Score=359.14 Aligned_cols=255 Identities=15% Similarity=0.182 Sum_probs=195.2
Q ss_pred cCCCCc-CccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhh-ccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSS-SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISK-LRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~-~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~-l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|... +.||+|+||+||+|+.. +|+.||||+++. ...+.+|++++.+ .+||||++++++|..... ...
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~---~~~ 132 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYA---GRK 132 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET---TEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeeccc---CCc
Confidence 456555 68999999999999976 699999999963 2567889998755 489999999999864221 134
Q ss_pred eEEEEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC---CceeeecCCC
Q 004195 557 IIYLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE---NFHVKINSYN 632 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~kl~DFG 632 (769)
..++|||||++|+|.+++.... ..+++..+..|+.||++||+|||+. +|+||||||+|||++. ++.+||+|||
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecc
Confidence 5899999999999999998543 4699999999999999999999998 9999999999999987 7899999999
Q ss_pred CchhhhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-----HHhhhhhccccccc
Q 004195 633 LPLLAEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-----VKDLLQVNIGTDEA 706 (769)
Q Consensus 633 la~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-----~~~~~~~~~~~~~~ 706 (769)
+++...... .....++..|++||.+.+..++.++|||||||++|||+||++||....... ...+......
T Consensus 210 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~---- 285 (400)
T 1nxk_A 210 FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE---- 285 (400)
T ss_dssp TCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC----
T ss_pred cccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc----
Confidence 997554322 233445667889999988899999999999999999999999997543211 1111110000
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...+ ....+++ ++.+++.+||+.||++|||+.|+++|+|+...
T Consensus 286 ---~~~~-~~~~~s~----~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 328 (400)
T 1nxk_A 286 ---FPNP-EWSEVSE----EVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328 (400)
T ss_dssp ---CCTT-TTTTSCH----HHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred ---CCCc-ccccCCH----HHHHHHHHHCCCChhHCcCHHHHhcCccccCC
Confidence 0001 1122333 48899999999999999999999999999753
No 123
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.5e-39 Score=337.41 Aligned_cols=253 Identities=17% Similarity=0.285 Sum_probs=205.0
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|...+.||+|+||.||+|+..+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+. .+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------~~ 79 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP-------IC 79 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS-------CE
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC-------eE
Confidence 4577889999999999999999888899999998543 345789999999999999999999999976443 79
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhc
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEA 639 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~ 639 (769)
+||||+++++|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 80 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 156 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 156 (267)
T ss_dssp EEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccc
Confidence 99999999999999986555789999999999999999999999 999999999999999999999999999875432
Q ss_pred cC---CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCccc
Q 004195 640 RG---KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAV 715 (769)
Q Consensus 640 ~~---~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 715 (769)
.. .....++..|.+||......++.++||||||+++|||+| |++||...........+.... .+..
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~----------~~~~ 226 (267)
T 3t9t_A 157 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF----------RLYK 226 (267)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC----------CCCC
T ss_pred ccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC----------cCCC
Confidence 11 111222345788999888889999999999999999999 899987654333222121110 0111
Q ss_pred cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 716 MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 716 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...+++ .+.+++.+||+.||++|||+.|+++++....+
T Consensus 227 ~~~~~~----~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 227 PRLAST----HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp CTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CccCcH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 122333 48899999999999999999999999987654
No 124
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.7e-40 Score=358.52 Aligned_cols=269 Identities=20% Similarity=0.290 Sum_probs=194.0
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~ 552 (769)
...++|+..+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.++.++. |||||++++++...+
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~--- 82 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN--- 82 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTT---
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCC---
Confidence 34578999999999999999999975 7999999999654222 2356788999999997 999999999997533
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
....|+|||||+ |+|.+++... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 83 --~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG 154 (388)
T 3oz6_A 83 --DRDVYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFG 154 (388)
T ss_dssp --SSCEEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred --CCEEEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCc
Confidence 234899999997 6999999753 589999999999999999999999 99999999999999999999999999
Q ss_pred Cchhhhcc-----------------------CCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCc
Q 004195 633 LPLLAEAR-----------------------GKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSEN 688 (769)
Q Consensus 633 la~~~~~~-----------------------~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~ 688 (769)
+++..... ......++..|++||.+.+ ..++.++||||+||++|||++|++||.+.
T Consensus 155 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 155 LSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp TCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99654221 0112234556788998865 67899999999999999999999999765
Q ss_pred hhHHHHhhhhhccccc--cccccccCc-----------------cccCCC-------------CHHHHHHHHHHHHHcCc
Q 004195 689 VVVLVKDLLQVNIGTD--EARKSIVDP-----------------AVMNEC-------------SDESLKRMMELCLRCLS 736 (769)
Q Consensus 689 ~~~~~~~~~~~~~~~~--~~~~~~~d~-----------------~~~~~~-------------~~~~~~~l~~li~~cl~ 736 (769)
........+......+ +.+..+..+ ...... ......++.+++.+||+
T Consensus 235 ~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~ 314 (388)
T 3oz6_A 235 STMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQ 314 (388)
T ss_dssp SHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhc
Confidence 4322221111111111 000000000 000000 00112348899999999
Q ss_pred CCCCCCCCHHHHHHHhHhhh
Q 004195 737 NEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 737 ~dP~~RPs~~evl~~l~~~~ 756 (769)
.||++|||++|+++|+|+..
T Consensus 315 ~dP~~R~t~~e~l~Hp~~~~ 334 (388)
T 3oz6_A 315 FNPNKRISANDALKHPFVSI 334 (388)
T ss_dssp SSGGGSCCHHHHTTSTTTTT
T ss_pred cCcccCCCHHHHhCCHHHHH
Confidence 99999999999999999864
No 125
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5.5e-40 Score=351.11 Aligned_cols=253 Identities=20% Similarity=0.275 Sum_probs=200.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcE----EEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTL----VAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~----vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|...+.||+|+||+||+|++. +++. ||+|.+.... ....+.+.+|+.++++++||||++++++|.+.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 87 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS----- 87 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBS-----
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC-----
Confidence 46778899999999999999965 4554 7888875442 23345688899999999999999999998632
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 88 ---~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 161 (325)
T 3kex_A 88 ---SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGV 161 (325)
T ss_dssp ---SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSG
T ss_pred ---ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCc
Confidence 27999999999999999987655799999999999999999999999 999999999999999999999999999
Q ss_pred chhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 634 PLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 634 a~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
++....... ....++..|++||.+.+..++.++|||||||++|||+| |+.||...........+.....
T Consensus 162 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~------ 235 (325)
T 3kex_A 162 ADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGER------ 235 (325)
T ss_dssp GGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCB------
T ss_pred ccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC------
Confidence 976543322 12223346888999988899999999999999999999 9999976543333332221100
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+.....++. .+.+++.+||+.||++|||+.|+++++.....
T Consensus 236 ----~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 236 ----LAQPQICTI----DVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp ----CCCCTTBCT----TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred ----CCCCCcCcH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 001111222 37789999999999999999999999986643
No 126
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=6.7e-40 Score=362.53 Aligned_cols=258 Identities=21% Similarity=0.246 Sum_probs=196.7
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--------CChhHHHHHHHHHhhccCCceeeEeeeeec
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--------SSPHMYTYHIELISKLRHSNLVSALGHCLD 547 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--------~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~ 547 (769)
...++|...+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++|||||++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34678999999999999999999976 689999999975421 112358899999999999999999999853
Q ss_pred cCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC---c
Q 004195 548 FSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN---F 624 (769)
Q Consensus 548 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~---~ 624 (769)
. ..++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||++.+ +
T Consensus 212 ~--------~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~ 279 (419)
T 3i6u_A 212 E--------DYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDC 279 (419)
T ss_dssp S--------EEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSC
T ss_pred C--------ceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcc
Confidence 2 2799999999999999997654 699999999999999999999999 99999999999999654 4
Q ss_pred eeeecCCCCchhhhccCC-cceeecCCCcchhhhc---cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhh
Q 004195 625 HVKINSYNLPLLAEARGK-GSAEVSSPAKKTSVLA---RTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQV 699 (769)
Q Consensus 625 ~~kl~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~---~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~ 699 (769)
.+||+|||+++....... ....++..|++||.+. ...++.++|||||||++|||+||++||...... .....+..
T Consensus 280 ~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~ 359 (419)
T 3i6u_A 280 LIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 359 (419)
T ss_dssp CEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHT
T ss_pred eEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhc
Confidence 599999999976543322 2334566788899874 356788999999999999999999999753211 11111110
Q ss_pred ccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.. . ...+......+ ..+.+++.+||+.||++|||++|+++|+|+...
T Consensus 360 ~~--~-----~~~~~~~~~~~----~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~ 406 (419)
T 3i6u_A 360 GK--Y-----NFIPEVWAEVS----EKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406 (419)
T ss_dssp TC--C-----CCCHHHHTTSC----HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred CC--C-----CCCchhhcccC----HHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence 00 0 00111112233 348899999999999999999999999999754
No 127
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=6.4e-40 Score=350.33 Aligned_cols=261 Identities=17% Similarity=0.268 Sum_probs=187.5
Q ss_pred HhcCCCCcCccccCCceeEEEEEeCC-Cc---EEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLTD-GT---LVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~~-g~---~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
..++|+..+.||+|+||.||+|+... +. .||||+++.... ...+.+.+|++++++++||||+++++++.+....
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 35678899999999999999999753 32 799999976532 2346789999999999999999999999764431
Q ss_pred CCCcceEEEEEeccCCCchhhhhcC-----CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCcee
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISG-----PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHV 626 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ 626 (769)
+ .....++||||+++|+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+||++++++.+
T Consensus 101 ~-~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 101 G-RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred c-CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 1 11234899999999999999862 223589999999999999999999999 99999999999999999999
Q ss_pred eecCCCCchhhhccCCc----ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcc
Q 004195 627 KINSYNLPLLAEARGKG----SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNI 701 (769)
Q Consensus 627 kl~DFGla~~~~~~~~~----~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~ 701 (769)
||+|||+++........ ....+..|++||.+.+..++.++|||||||++|||+| |++||...........+....
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~ 256 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN 256 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCC
Confidence 99999999765332211 1122335788999888899999999999999999999 899987654332222111100
Q ss_pred ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 702 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+.....+++ .+.+++.+||+.||++|||+.|+++.+..+.
T Consensus 257 ----------~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 257 ----------RLKQPPECME----EVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp ----------CCCCCTTCCH----HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----------CCCCCCccCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0111123333 4889999999999999999766666665443
No 128
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=7.2e-40 Score=355.52 Aligned_cols=250 Identities=14% Similarity=0.180 Sum_probs=195.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC---CChhHHHHHHHH-HhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK---SSPHMYTYHIEL-ISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~~Ei~~-l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|+..+.||+|+||.||+|+.+ +++.||||+++.... ...+.+.+|..+ ++.++|||||++++++.+.+
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~----- 112 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD----- 112 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSS-----
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC-----
Confidence 56888999999999999999976 688999999976532 223456777776 57789999999999998643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..|+||||+++|+|.+++.+.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 113 --~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a 186 (373)
T 2r5t_A 113 --KLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLC 186 (373)
T ss_dssp --EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBC
T ss_pred --EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccc
Confidence 4899999999999999997543 688999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhcc--CCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHH-Hhhhhhcccccccccccc
Q 004195 635 LLAEAR--GKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLV-KDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 635 ~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 711 (769)
+..... ......++..|++||.+.+..++.++|||||||++|||++|++||........ ..+....
T Consensus 187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~----------- 255 (373)
T 2r5t_A 187 KENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP----------- 255 (373)
T ss_dssp GGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSC-----------
T ss_pred cccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcc-----------
Confidence 753222 22334456678899999888999999999999999999999999976543322 2222110
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCH----HHHHHHhHhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSV----EDTLWNLQFAT 756 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~~l~~~~ 756 (769)
..+....++ .+.+++.+||+.||++||++ .|+.+|+||..
T Consensus 256 -~~~~~~~~~----~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~ 299 (373)
T 2r5t_A 256 -LQLKPNITN----SARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSL 299 (373)
T ss_dssp -CCCCSSSCH----HHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTT
T ss_pred -cCCCCCCCH----HHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccC
Confidence 111122333 48899999999999999986 69999999864
No 129
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.6e-39 Score=342.29 Aligned_cols=255 Identities=21% Similarity=0.317 Sum_probs=207.7
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.+.|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+..
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 93 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT------- 93 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-------
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-------
Confidence 346888999999999999999965 68999999997653 234578999999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 94 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~ 168 (303)
T 3a7i_A 94 KLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQ 168 (303)
T ss_dssp EEEEEEECCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred eEEEEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeeccccee
Confidence 489999999999999999753 689999999999999999999999 999999999999999999999999999865
Q ss_pred hhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 637 AEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 637 ~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
..... .....++..|.+||......++.++|||||||++|||++|++||...........+... ..+.
T Consensus 169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----------~~~~ 238 (303)
T 3a7i_A 169 LTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN----------NPPT 238 (303)
T ss_dssp CBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS----------CCCC
T ss_pred cCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcC----------CCCC
Confidence 43322 12223445678899988888999999999999999999999999765433222211110 1122
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
+...++.+ +.+++.+||+.||++|||+.|+++|+|+.....
T Consensus 239 ~~~~~~~~----l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 279 (303)
T 3a7i_A 239 LEGNYSKP----LKEFVEACLNKEPSFRPTAKELLKHKFILRNAK 279 (303)
T ss_dssp CCSSCCHH----HHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCC
T ss_pred CccccCHH----HHHHHHHHcCCChhhCcCHHHHhhChhhhcCCC
Confidence 22334444 889999999999999999999999999976543
No 130
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=4.2e-40 Score=372.48 Aligned_cols=253 Identities=18% Similarity=0.238 Sum_probs=206.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++... .......+.+|++++++++|||||++++++.+.+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~----- 257 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD----- 257 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC-----
Confidence 466889999999999999999976 7999999999753 2344567889999999999999999999998643
Q ss_pred cceEEEEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..++||||+++|+|.+++...+ ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 258 --~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGl 332 (576)
T 2acx_A 258 --ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGL 332 (576)
T ss_dssp --EEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred --EEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEeccc
Confidence 4899999999999999997543 3589999999999999999999999 999999999999999999999999999
Q ss_pred chhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh----HHHHhhhhhccccccccc
Q 004195 634 PLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV----VLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 634 a~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~----~~~~~~~~~~~~~~~~~~ 708 (769)
++....... ....++..|++||.+.+..++.++|||||||++|||++|++||..... ..+...+..
T Consensus 333 a~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~--------- 403 (576)
T 2acx_A 333 AVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE--------- 403 (576)
T ss_dssp CEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH---------
T ss_pred ceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc---------
Confidence 976543322 223455678889999888899999999999999999999999976421 111111110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
....+...++ .++.+++.+||+.||++|| +++||++|+||..
T Consensus 404 --~~~~~p~~~s----~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~ 450 (576)
T 2acx_A 404 --VPEEYSERFS----PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450 (576)
T ss_dssp --CCCCCCTTSC----HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred --ccccCCccCC----HHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhcc
Confidence 0111112233 3489999999999999999 8999999999975
No 131
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4e-40 Score=353.16 Aligned_cols=267 Identities=19% Similarity=0.334 Sum_probs=200.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|+||.||+|+.. +|+.||||++....... .+.+.+|++++++++||||++++++|.+..
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------- 97 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK------- 97 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-------
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC-------
Confidence 46888999999999999999976 59999999987543322 345788999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 98 ~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 173 (331)
T 4aaa_A 98 RWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFART 173 (331)
T ss_dssp EEEEEEECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred EEEEEEecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCcee
Confidence 4899999999999998876544 699999999999999999999999 999999999999999999999999999976
Q ss_pred hhccC--CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccc--------
Q 004195 637 AEARG--KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTD-------- 704 (769)
Q Consensus 637 ~~~~~--~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~-------- 704 (769)
..... .....++..|++||.+.+. .++.++|||||||++|||+||++||....... ...+........
T Consensus 174 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (331)
T 4aaa_A 174 LAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFN 253 (331)
T ss_dssp ----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred ecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhh
Confidence 54322 1223345567889987664 68999999999999999999999997654322 111111100000
Q ss_pred --cccccccCccccCCCC-----HHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 705 --EARKSIVDPAVMNECS-----DESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 705 --~~~~~~~d~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
........+......+ +.....+.+++.+||+.||++|||++|+++|+||...
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 254 KNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313 (331)
T ss_dssp HCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred hccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence 0001111111111111 1223458999999999999999999999999999754
No 132
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=8.7e-40 Score=340.92 Aligned_cols=256 Identities=19% Similarity=0.252 Sum_probs=203.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|+..+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.++++++||||+++++++.+..
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 78 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN------- 78 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-------
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC-------
Confidence 457888999999999999999976 799999999975533 33467899999999999999999999997643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+..
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 154 (276)
T 2yex_A 79 IQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATV 154 (276)
T ss_dssp EEEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEEEecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccc
Confidence 4899999999999999998554 689999999999999999999998 999999999999999999999999999865
Q ss_pred hhccC----CcceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhH--HHHhhhhhcccccccccc
Q 004195 637 AEARG----KGSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVV--LVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 637 ~~~~~----~~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~--~~~~~~~~~~~~~~~~~~ 709 (769)
..... .....++..|.+||...+..+ +.++||||||+++|||+||+.||...... ....+.....
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------- 226 (276)
T 2yex_A 155 FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-------- 226 (276)
T ss_dssp CEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCT--------
T ss_pred cCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccc--------
Confidence 43221 122234456788998876665 77999999999999999999999754321 1111111000
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
.. ......++ .+.+++.+||+.||++|||++|+++|+||.....
T Consensus 227 ~~--~~~~~~~~----~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 270 (276)
T 2yex_A 227 YL--NPWKKIDS----APLALLHKILVENPSARITIPDIKKDRWYNKPLK 270 (276)
T ss_dssp TS--TTGGGSCH----HHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred cc--CchhhcCH----HHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence 00 00112333 4889999999999999999999999999975543
No 133
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=342.29 Aligned_cols=256 Identities=17% Similarity=0.247 Sum_probs=198.0
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
.|.....||+|+||.||+|+.. +++.||||.+........+.+.+|+.++++++||||+++++++.+.+ ..+
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-------~~~ 95 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG-------FIK 95 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETT-------EEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC-------cEE
Confidence 3555679999999999999965 68999999998665555678999999999999999999999997643 489
Q ss_pred EEEeccCCCchhhhhcCC--CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC-CceeeecCCCCchh
Q 004195 560 LIFEYAPNETLRSFISGP--GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE-NFHVKINSYNLPLL 636 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-~~~~kl~DFGla~~ 636 (769)
+||||+++++|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++.
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~ 172 (295)
T 2clq_A 96 IFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKR 172 (295)
T ss_dssp EEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEE
T ss_pred EEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccc
Confidence 999999999999999743 23567899999999999999999999 9999999999999987 89999999999865
Q ss_pred hhccC--CcceeecCCCcchhhhccC--CCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 637 AEARG--KGSAEVSSPAKKTSVLART--EQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 637 ~~~~~--~~~~~~~~~~~~pe~~~~~--~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
..... .....++..|.+||..... .++.++|||||||++|||+||+.||................ ...
T Consensus 173 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~--------~~~ 244 (295)
T 2clq_A 173 LAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF--------KVH 244 (295)
T ss_dssp SCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHH--------CCC
T ss_pred cCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccc--------ccc
Confidence 43221 1222344567889887654 38899999999999999999999986432211111000000 011
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
+.+...+++ ++.+++.+||+.||++|||++|+++|+|+....
T Consensus 245 ~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 245 PEIPESMSA----EAKAFILKCFEPDPDKRACANDLLVDEFLKVSS 286 (295)
T ss_dssp CCCCTTSCH----HHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred ccccccCCH----HHHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence 222233344 488999999999999999999999999997544
No 134
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.8e-39 Score=351.09 Aligned_cols=259 Identities=15% Similarity=0.285 Sum_probs=204.8
Q ss_pred HHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--------hhHHHHHHHHHhhc-cCCceeeEee
Q 004195 474 ELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--------PHMYTYHIELISKL-RHSNLVSALG 543 (769)
Q Consensus 474 el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--------~~~~~~Ei~~l~~l-~H~nIv~l~~ 543 (769)
......++|...+.||+|+||.||+|+.. +|+.||||+++...... .+.+.+|+.+++++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 34556678999999999999999999986 79999999997553211 24578899999999 7999999999
Q ss_pred eeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC
Q 004195 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623 (769)
Q Consensus 544 ~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~ 623 (769)
++.... ..++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.+
T Consensus 168 ~~~~~~-------~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~ 236 (365)
T 2y7j_A 168 SYESSS-------FMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDN 236 (365)
T ss_dssp EEEBSS-------EEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTT
T ss_pred EEeeCC-------EEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCC
Confidence 987633 4899999999999999997443 689999999999999999999998 99999999999999999
Q ss_pred ceeeecCCCCchhhhccCC-cceeecCCCcchhhhcc------CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhh
Q 004195 624 FHVKINSYNLPLLAEARGK-GSAEVSSPAKKTSVLAR------TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDL 696 (769)
Q Consensus 624 ~~~kl~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~------~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~ 696 (769)
+.+||+|||++........ ....++..|++||.+.+ ..++.++|||||||++|||+||+.||...........
T Consensus 237 ~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 316 (365)
T 2y7j_A 237 MQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRM 316 (365)
T ss_dssp CCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred CCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 9999999999865543322 22344556788988753 3588999999999999999999999976543322221
Q ss_pred h-hhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 697 L-QVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 697 ~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
+ ...... ........++ .+.+++.+||+.||++|||++|+++|+||.
T Consensus 317 i~~~~~~~--------~~~~~~~~~~----~~~~li~~~L~~dP~~Rps~~ell~hp~f~ 364 (365)
T 2y7j_A 317 IMEGQYQF--------SSPEWDDRSS----TVKDLISRLLQVDPEARLTAEQALQHPFFE 364 (365)
T ss_dssp HHHTCCCC--------CHHHHSSSCH----HHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred HHhCCCCC--------CCcccccCCH----HHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence 1 111100 0001112233 488999999999999999999999999985
No 135
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=5.1e-40 Score=371.13 Aligned_cols=252 Identities=22% Similarity=0.325 Sum_probs=204.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|...+.||+|+||.||+|++. ++..||||.++... ...++|.+|++++++++|||||+++++|.+...
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~------- 290 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP------- 290 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS-------
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCc-------
Confidence 345778899999999999999987 48899999997543 346789999999999999999999999976433
Q ss_pred EEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++|||||++|+|.++++. ....+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 291 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 367 (495)
T 1opk_A 291 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRL 367 (495)
T ss_dssp CEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEEC
T ss_pred EEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeeccccee
Confidence 7999999999999999973 334689999999999999999999999 999999999999999999999999999976
Q ss_pred hhccCC---cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 637 AEARGK---GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 637 ~~~~~~---~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
...... .....+..|++||.+....++.++|||||||++|||+| |+.||.......+...+.... .
T Consensus 368 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~----------~ 437 (495)
T 1opk_A 368 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY----------R 437 (495)
T ss_dssp CTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC----------C
T ss_pred ccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----------C
Confidence 543221 11122345788999888889999999999999999999 999987654333322222111 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
......+++ .+.+++.+||+.||++|||+.|+++.+...
T Consensus 438 ~~~~~~~~~----~l~~li~~cl~~dP~~RPs~~el~~~L~~~ 476 (495)
T 1opk_A 438 MERPEGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETM 476 (495)
T ss_dssp CCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CCCCCCCCH----HHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 111123343 488999999999999999999999998754
No 136
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.1e-40 Score=356.78 Aligned_cols=269 Identities=18% Similarity=0.249 Sum_probs=204.5
Q ss_pred cCCCCcCccccCCceeEEEEEe-----CCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL-----TDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----- 97 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPG----- 97 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC-----
Confidence 4677889999999999999984 368899999998654444567899999999999999999999987432
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
....++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 98 RQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLA 174 (327)
T ss_dssp SCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred CceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccc
Confidence 3458999999999999999985444699999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhccCC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhh-ccccccccc
Q 004195 635 LLAEARGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQV-NIGTDEARK 708 (769)
Q Consensus 635 ~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~-~~~~~~~~~ 708 (769)
+....... ....++..|++||.+.+..++.++|||||||++|||+||+.|+.............. .........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (327)
T 3lxl_A 175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLL 254 (327)
T ss_dssp EECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHH
T ss_pred eecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHH
Confidence 76543221 111223347889998888889999999999999999999999875443322111000 000000011
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
+..........+......+.+++.+||+.||++|||++|++++++...
T Consensus 255 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 302 (327)
T 3lxl_A 255 ELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW 302 (327)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-
T ss_pred HHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111111111122223344899999999999999999999999998653
No 137
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=8.5e-40 Score=341.63 Aligned_cols=259 Identities=19% Similarity=0.261 Sum_probs=204.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|+..+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|++++++++||||+++++++.+.. .
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 79 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT-----N 79 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGG-----G
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCC-----C
Confidence 357888999999999999999976 7999999999754322 2356889999999999999999999886422 2
Q ss_pred ceEEEEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCCCC-----ccccCccccceeeCCCceee
Q 004195 556 SIIYLIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG-----VFSNNLKITDVLLDENFHVK 627 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-----ivHrDlKp~NILld~~~~~k 627 (769)
...++||||+++|+|.+++.. ....+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+|
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~k 156 (279)
T 2w5a_A 80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVK 156 (279)
T ss_dssp TEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEE
T ss_pred ceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEE
Confidence 348999999999999999973 233589999999999999999999998 6 99999999999999999999
Q ss_pred ecCCCCchhhhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccc
Q 004195 628 INSYNLPLLAEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDE 705 (769)
Q Consensus 628 l~DFGla~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (769)
|+|||+++....... ....++..|++||...+..++.++||||||+++|||+||+.||...........+....
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~---- 232 (279)
T 2w5a_A 157 LGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK---- 232 (279)
T ss_dssp ECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC----
T ss_pred EecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcc----
Confidence 999999876543221 11234556888999888889999999999999999999999997654333222221110
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 706 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
.+.+...+++ ++.+++.+||+.||++|||++|+++++|+.+..+
T Consensus 233 ------~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 276 (279)
T 2w5a_A 233 ------FRRIPYRYSD----ELNEIITRMLNLKDYHRPSVEEILENPLILEHHH 276 (279)
T ss_dssp ------CCCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred ------cccCCcccCH----HHHHHHHHHcCCCcccCCCHHHHHhChhhhhhcc
Confidence 0111223343 4889999999999999999999999999886644
No 138
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.5e-39 Score=349.93 Aligned_cols=274 Identities=17% Similarity=0.274 Sum_probs=203.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCC-CCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD-DPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~-~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++.+.... ....
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 57888999999999999999975 799999999975532 2245788999999999999999999999764321 1113
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
+..++||||++ |+|.+.+......+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 97 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 97 GSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp CEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred ceEEEEEeccC-CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 46899999997 588888876655799999999999999999999999 99999999999999999999999999996
Q ss_pred hhhccC------CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc-ccc-c
Q 004195 636 LAEARG------KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG-TDE-A 706 (769)
Q Consensus 636 ~~~~~~------~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~-~~~-~ 706 (769)
...... .....++..|++||.+.+ ..++.++|||||||++|||+||++||...........+..... ... .
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 252 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 252 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhh
Confidence 543211 122233456788998765 4589999999999999999999999987554332222211111 110 1
Q ss_pred cccccCcccc--------CCCC-HHH------HHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 707 RKSIVDPAVM--------NECS-DES------LKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 707 ~~~~~d~~~~--------~~~~-~~~------~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+....+.... .... .+. ...+.+++.+||+.||++|||++|+++|+||...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 318 (351)
T 3mi9_A 253 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 318 (351)
T ss_dssp STTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSS
T ss_pred ccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCC
Confidence 1110000000 0000 011 2348899999999999999999999999999753
No 139
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=8.8e-40 Score=350.38 Aligned_cols=259 Identities=11% Similarity=0.063 Sum_probs=201.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ..+.+.+|+++++++ +||||+++++++.+..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~------- 78 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGK------- 78 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETT-------
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCC-------
Confidence 356888999999999999999964 79999999987543 235689999999999 9999999999988643
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce-----eeecCC
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH-----VKINSY 631 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~-----~kl~DF 631 (769)
..++||||+ +++|.+++......+++..+..++.|+++||+|||+. +|+||||||+|||++.++. +||+||
T Consensus 79 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DF 154 (330)
T 2izr_A 79 YNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDF 154 (330)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCC
T ss_pred ccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEc
Confidence 489999999 8999999985445799999999999999999999999 9999999999999999887 999999
Q ss_pred CCchhhhccCC---------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc
Q 004195 632 NLPLLAEARGK---------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG 702 (769)
Q Consensus 632 Gla~~~~~~~~---------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~ 702 (769)
|+++....... ....++..|++||.+.+..++.++|||||||++|||+||+.||.................
T Consensus 155 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~ 234 (330)
T 2izr_A 155 ALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGD 234 (330)
T ss_dssp TTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHH
T ss_pred ccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHh
Confidence 99975433221 233456678889999888999999999999999999999999976322111111110000
Q ss_pred cccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 703 TDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 703 ~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.. .....+.....+ + ++.+++.+||+.||.+||++++|.+.+....+.
T Consensus 235 ~~---~~~~~~~~~~~~----p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 235 TK---RATPIEVLCENF----P-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp HH---HHSCHHHHTTTC----H-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred hh---ccCCHHHHhccC----h-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 00 000000001111 1 589999999999999999999999988755443
No 140
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=5e-41 Score=366.87 Aligned_cols=257 Identities=11% Similarity=0.114 Sum_probs=193.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHH---HHHhhccCCceeeEe-------ee
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHI---ELISKLRHSNLVSAL-------GH 544 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei---~~l~~l~H~nIv~l~-------~~ 544 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+ +++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 456888899999999999999964 79999999997542 22346788999 555666899999998 55
Q ss_pred eeccCC--------CCCCc--ceEEEEEeccCCCchhhhhcCC------CCCCCHHHHHHHHHHHHHHhcccccCCCCCc
Q 004195 545 CLDFSL--------DDPSI--SIIYLIFEYAPNETLRSFISGP------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608 (769)
Q Consensus 545 ~~~~~~--------~~~~~--~~~~lV~Ey~~~gsL~~~l~~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 608 (769)
+.+.+. ++... ...++||||+ +|+|.+++... ...++|..+..|+.||++||+|||+. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 443221 00000 1378999999 68999999732 12355788999999999999999999 99
Q ss_pred cccCccccceeeCCCceeeecCCCCchhhhccCCcceeecCCCcchhhhccC-----------CCCCCCCeeehhHHHHH
Q 004195 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLART-----------EQDDKSDVYDIGIILIE 677 (769)
Q Consensus 609 vHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~-----------~~~~ksDVwS~Gvil~e 677 (769)
+||||||+|||++.++.+||+|||+++...... ....+ ..|++||.+.+. .++.++|||||||++||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~-~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~e 305 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARV-VSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW 305 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTCEE-ECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCCcc-cCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHH
Confidence 999999999999999999999999997543322 22233 778889998877 79999999999999999
Q ss_pred HHhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 678 IIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 678 lltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
|+||+.||.......... .+.. ....++++ +.+++.+||+.||++|||+.|+++|+||...
T Consensus 306 lltg~~Pf~~~~~~~~~~-------------~~~~--~~~~~~~~----~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~ 366 (377)
T 3byv_A 306 IWCADLPITKDAALGGSE-------------WIFR--SCKNIPQP----VRALLEGFLRYPKEDRLLPLQAMETPEYEQL 366 (377)
T ss_dssp HHHSSCCC------CCSG-------------GGGS--SCCCCCHH----HHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred HHHCCCCCcccccccchh-------------hhhh--hccCCCHH----HHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence 999999996543211111 0000 01233443 8899999999999999999999999999865
Q ss_pred hcc
Q 004195 758 IQG 760 (769)
Q Consensus 758 ~~~ 760 (769)
.+.
T Consensus 367 ~~~ 369 (377)
T 3byv_A 367 RTE 369 (377)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 141
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.2e-39 Score=361.59 Aligned_cols=272 Identities=17% Similarity=0.194 Sum_probs=200.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc------cCCceeeEeeeeeccCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL------RHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l------~H~nIv~l~~~~~~~~~~ 551 (769)
..+|+..+.||+|+||.||+|+.. +++.||||+++... ...+.+.+|+++++.+ .|+||+++++++....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~-- 172 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN-- 172 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT--
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC--
Confidence 456888999999999999999876 68999999997431 2235678899998887 4679999999998643
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce--eee
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH--VKI 628 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~--~kl 628 (769)
..++||||++ ++|.+++... ...+++..+..++.||++||+|||+. +|+||||||+|||++.++. +||
T Consensus 173 -----~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL 243 (429)
T 3kvw_A 173 -----HICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKV 243 (429)
T ss_dssp -----EEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEE
T ss_pred -----eEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEE
Confidence 4899999996 6999988743 24589999999999999999999998 9999999999999999887 999
Q ss_pred cCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccc-cc
Q 004195 629 NSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTD-EA 706 (769)
Q Consensus 629 ~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~-~~ 706 (769)
+|||+++...... ....++..|++||.+.+..++.++|||||||++|||+||++||....... +..+... .... ..
T Consensus 244 ~DFG~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~-~~~p~~~ 321 (429)
T 3kvw_A 244 IDFGSSCYEHQRV-YTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIEL-LGMPSQK 321 (429)
T ss_dssp CCCTTCEETTCCC-CSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH-HCCCCHH
T ss_pred eecccceecCCcc-cccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-cCCCCHH
Confidence 9999996554322 23344566889999988899999999999999999999999997654322 2221111 1100 00
Q ss_pred c-------ccccC--------------------------------ccccCC----CCHHHHHHHHHHHHHcCcCCCCCCC
Q 004195 707 R-------KSIVD--------------------------------PAVMNE----CSDESLKRMMELCLRCLSNEPKDRP 743 (769)
Q Consensus 707 ~-------~~~~d--------------------------------~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RP 743 (769)
+ ...++ +..... ........+.+|+.+||+.||++||
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rp 401 (429)
T 3kvw_A 322 LLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRM 401 (429)
T ss_dssp HHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSC
T ss_pred HHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCC
Confidence 0 00000 000000 0001134588999999999999999
Q ss_pred CHHHHHHHhHhhhhhcccccc
Q 004195 744 SVEDTLWNLQFATQIQGLKEN 764 (769)
Q Consensus 744 s~~evl~~l~~~~~~~~~~~~ 764 (769)
|++|+++|+|+....+.....
T Consensus 402 ta~e~L~Hpw~~~~~~~~~~~ 422 (429)
T 3kvw_A 402 TPGQALRHPWLRRRLPKPPTG 422 (429)
T ss_dssp CHHHHHTSTTTC---------
T ss_pred CHHHHhCChhhccCCCCCCcc
Confidence 999999999998776544433
No 142
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.7e-39 Score=348.07 Aligned_cols=260 Identities=15% Similarity=0.207 Sum_probs=200.6
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|+..+.||+|+||.||+|+.. +++.||||+++. ...+.+.+|++++++++ ||||+++++++.+.. ...
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~-----~~~ 107 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPV-----SRT 107 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTT-----TCC
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCC-----CCc
Confidence 56888999999999999999964 799999999873 34578999999999997 999999999997632 234
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc-eeeecCCCCchh
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF-HVKINSYNLPLL 636 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~-~~kl~DFGla~~ 636 (769)
.++||||+++++|.+++. .+++..+..++.|+++||+|||+. +|+||||||+|||++.++ .+||+|||+++.
T Consensus 108 ~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~ 180 (330)
T 3nsz_A 108 PALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180 (330)
T ss_dssp EEEEEECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred eEEEEeccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence 899999999999999986 488999999999999999999999 999999999999999776 899999999976
Q ss_pred hhccCC-cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCch--hHHHHhhhhh-------------
Q 004195 637 AEARGK-GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENV--VVLVKDLLQV------------- 699 (769)
Q Consensus 637 ~~~~~~-~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~--~~~~~~~~~~------------- 699 (769)
...... ....++..|++||.+.+ ..++.++|||||||++|||+||+.||.... ..........
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 260 (330)
T 3nsz_A 181 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 260 (330)
T ss_dssp CCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred cCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHh
Confidence 543322 22334456778988766 668999999999999999999999885322 1111111100
Q ss_pred ccccc------------cccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 700 NIGTD------------EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 700 ~~~~~------------~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
..... ..+......... .....++.+++.+||+.||++|||++|+++|+||....
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~ 327 (330)
T 3nsz_A 261 NIELDPRFNDILGRHSRKRWERFVHSENQ----HLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 327 (330)
T ss_dssp TCCCCTHHHHHHCCCCCCCGGGGCCTTTG----GGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred ccccccchhhhhhhccccchhhhcccccc----ccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence 00000 001111111111 11234589999999999999999999999999998543
No 143
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-39 Score=350.77 Aligned_cols=270 Identities=16% Similarity=0.243 Sum_probs=198.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++...... ...
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~-~~~ 102 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL-DDF 102 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSST-TTC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcc-ccC
Confidence 457888999999999999999975 7999999999654322 135688999999999999999999999764321 112
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...++||||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred ceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 3469999999 78999999753 589999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhcccccccc-cc---
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEAR-KS--- 709 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~-~~--- 709 (769)
..... .....++..|++||.+.+ ..++.++||||+||++|||++|++||.+.... ....+........... ..
T Consensus 177 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~ 255 (367)
T 1cm8_A 177 QADSE-MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 255 (367)
T ss_dssp ECCSS-CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSC
T ss_pred ccccc-cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhh
Confidence 65432 222334556788998776 67999999999999999999999999765432 2222221111100000 00
Q ss_pred ------------ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 710 ------------IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 710 ------------~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.....+ ....+.....+.+++.+||+.||++|||++|+++|+||..-
T Consensus 256 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~ 314 (367)
T 1cm8_A 256 DEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL 314 (367)
T ss_dssp HHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred HHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence 000000 01111223448899999999999999999999999999753
No 144
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1e-39 Score=354.84 Aligned_cols=268 Identities=11% Similarity=0.111 Sum_probs=201.1
Q ss_pred hcCCCCcCccccCCceeEEEEEeCC------CcEEEEEEccccCCC-----------ChhHHHHHHHHHhhccCCceeeE
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTD------GTLVAIRSLKMSKKS-----------SPHMYTYHIELISKLRHSNLVSA 541 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~------g~~vAvK~~~~~~~~-----------~~~~~~~Ei~~l~~l~H~nIv~l 541 (769)
.++|...+.||+|+||.||+|++.+ ++.||||++...... ....+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578899999999999999999754 478999998644210 11223345556677789999999
Q ss_pred eeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC
Q 004195 542 LGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD 621 (769)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld 621 (769)
++++.+... .....++||||+ +++|.+++......+++..+..|+.|++.||+|||+. +|+||||||+|||++
T Consensus 114 ~~~~~~~~~---~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 114 WGSGLHDKN---GKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEET---TEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred EeeeeeccC---CcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence 999976422 234589999999 9999999986655799999999999999999999999 999999999999998
Q ss_pred --CCceeeecCCCCchhhhccCC---------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh
Q 004195 622 --ENFHVKINSYNLPLLAEARGK---------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV 690 (769)
Q Consensus 622 --~~~~~kl~DFGla~~~~~~~~---------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~ 690 (769)
.++.+||+|||+++....... ....++..|++||.+.+..++.++|||||||++|||+||+.||.....
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~ 266 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK 266 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 889999999999965533221 122256678899999888899999999999999999999999975321
Q ss_pred H-HHHhhhhhccccccccccccCcccc-CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 691 V-LVKDLLQVNIGTDEARKSIVDPAVM-NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 691 ~-~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
. ........ .......++.++.+. ..+++ ++.+++.+||+.||++||+++++++.+....+..
T Consensus 267 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 267 DPKYVRDSKI--RYRENIASLMDKCFPAANAPG----EIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp CHHHHHHHHH--HHHHCHHHHHHHHSCTTCCCH----HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHH--HhhhhHHHHHHHhcccccCHH----HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 1 11111111 011112222222221 23344 4889999999999999999999999988665433
No 145
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=7.2e-40 Score=344.06 Aligned_cols=249 Identities=16% Similarity=0.233 Sum_probs=198.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CC-------cEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DG-------TLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g-------~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
++|...+.||+|+||+||+|+.. ++ ..||+|++........+.+.+|++++++++||||+++++++.+.+.
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~- 86 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE- 86 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC-
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC-
Confidence 46788899999999999999865 34 4799999976655566789999999999999999999999986443
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce------
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH------ 625 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~------ 625 (769)
.++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 87 ------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 157 (289)
T 4fvq_A 87 ------NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNP 157 (289)
T ss_dssp ------CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred ------CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccccc
Confidence 6999999999999999986655699999999999999999999999 9999999999999988877
Q ss_pred --eeecCCCCchhhhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCC-CCCCCchhHHHHhhhhhcc
Q 004195 626 --VKINSYNLPLLAEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNI 701 (769)
Q Consensus 626 --~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~-~p~~~~~~~~~~~~~~~~~ 701 (769)
+||+|||++...... ....++..|++||.+.+ ..++.++|||||||++|||+||. +|+...............
T Consensus 158 ~~~kl~Dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~- 234 (289)
T 4fvq_A 158 PFIKLSDPGISITVLPK--DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR- 234 (289)
T ss_dssp CEEEECCCCSCTTTSCH--HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-
T ss_pred ceeeeccCcccccccCc--cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhcc-
Confidence 999999998654322 12234556888998876 67899999999999999999954 555443332222211110
Q ss_pred ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 702 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
+......+ .++.+++.+||+.||++|||+.|+++++....
T Consensus 235 -----------~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~ 274 (289)
T 4fvq_A 235 -----------HQLPAPKA----AELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274 (289)
T ss_dssp -----------CCCCCCSS----CTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred -----------CCCCCCCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 01111112 23789999999999999999999999998653
No 146
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.9e-39 Score=365.62 Aligned_cols=256 Identities=19% Similarity=0.235 Sum_probs=200.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.+.|...+.||+|+||+||+|+.. ++..||||++.... ......+.+|+.++++++|||||+++++|.+..
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------ 109 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR------ 109 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS------
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC------
Confidence 446888999999999999999976 78999999997653 233567899999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC---CceeeecCCC
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE---NFHVKINSYN 632 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~kl~DFG 632 (769)
..++|||||++|+|.+.+.... .+++..+..++.|+++||+|||+. +|+||||||+|||++. ++.+||+|||
T Consensus 110 -~~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG 184 (494)
T 3lij_A 110 -NYYLVMECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFG 184 (494)
T ss_dssp -EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred -EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECC
Confidence 4899999999999999887443 689999999999999999999999 9999999999999976 4559999999
Q ss_pred CchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 633 LPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 633 la~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
+++....... ....++..|++||.+. ..++.++||||+||++|||++|++||...........+..... . .
T Consensus 185 ~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~------~-~ 256 (494)
T 3lij_A 185 LSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKY------T-F 256 (494)
T ss_dssp TCEECBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC------C-C
T ss_pred CCeECCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC------C-C
Confidence 9976543322 2334556778899774 6799999999999999999999999987554333222211100 0 1
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+.......++ .+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 257 ~~~~~~~~s~----~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 257 DSPEWKNVSE----GAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp CSGGGTTSCH----HHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred CchhcccCCH----HHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 1111123333 38899999999999999999999999999764
No 147
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.4e-39 Score=346.14 Aligned_cols=255 Identities=22% Similarity=0.313 Sum_probs=202.1
Q ss_pred hcCCCCcCccccCCceeEEEEEe------CCCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKL------TDGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
.++|...+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~- 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP- 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS-
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc-
Confidence 45688889999999999999985 2458999999975422 223578899999999999999999999976443
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCC-----------------------CCCCHHHHHHHHHHHHHHhcccccCCCCCc
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPG-----------------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 608 (769)
.++||||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +|
T Consensus 101 ------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i 171 (314)
T 2ivs_A 101 ------LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KL 171 (314)
T ss_dssp ------CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred ------eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CC
Confidence 799999999999999997432 2489999999999999999999999 99
Q ss_pred cccCccccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCC
Q 004195 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRP 683 (769)
Q Consensus 609 vHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~ 683 (769)
+||||||+||+++.++.+||+|||+++....... .....+..|++||...+..++.++|||||||++|||+| |+.
T Consensus 172 vH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 251 (314)
T 2ivs_A 172 VHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251 (314)
T ss_dssp ECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred cccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999865533221 11122334788998888889999999999999999999 999
Q ss_pred CCCCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 684 ITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 684 p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
||...........+.... .+.....+++ .+.+++.+||+.||++|||+.|+++++.....
T Consensus 252 p~~~~~~~~~~~~~~~~~----------~~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 252 PYPGIPPERLFNLLKTGH----------RMERPDNCSE----EMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp SSTTCCGGGHHHHHHTTC----------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHhhcCC----------cCCCCccCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 987654333322221110 1111223343 48899999999999999999999999986643
No 148
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.3e-39 Score=337.76 Aligned_cols=254 Identities=16% Similarity=0.234 Sum_probs=200.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|++++++++||||+++++++.+.+
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 84 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT------ 84 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS------
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC------
Confidence 46888899999999999999976 7999999999653 2334567899999999999999999999997643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 85 -~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~ 159 (276)
T 2h6d_A 85 -DFFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSN 159 (276)
T ss_dssp -EEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGG
T ss_pred -eEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeeccccc
Confidence 4899999999999999997543 689999999999999999999998 99999999999999999999999999987
Q ss_pred hhhccCC-cceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LAEARGK-GSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~~-~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
....... ....++..|.+||...+..+ +.++||||||+++|||++|+.||...........+.... .
T Consensus 160 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-----------~ 228 (276)
T 2h6d_A 160 MMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGV-----------F 228 (276)
T ss_dssp CCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC-----------C
T ss_pred ccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCc-----------c
Confidence 6543221 22334556788998876655 689999999999999999999997654433222221110 0
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
......+. .+.+++.+||+.||++|||++|+++|+|+....+
T Consensus 229 ~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~~ 270 (276)
T 2h6d_A 229 YIPEYLNR----SVATLLMHMLQVDPLKRATIKDIREHEWFKQDLP 270 (276)
T ss_dssp CCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred cCchhcCH----HHHHHHHHHccCChhhCCCHHHHHhChhhccCch
Confidence 11122333 4889999999999999999999999999986654
No 149
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=344.04 Aligned_cols=256 Identities=17% Similarity=0.264 Sum_probs=200.1
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
..+.|+..+.||+|+||.||+|+.. +|+.||||.+... ...+.+.+|++++++++||||+++++++.+..
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 97 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNT------- 97 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETT-------
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCC-------
Confidence 4567889999999999999999976 6999999999754 24567999999999999999999999998633
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++|+|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 98 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 174 (314)
T 3com_A 98 DLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQ 174 (314)
T ss_dssp EEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchh
Confidence 48999999999999999974444799999999999999999999999 999999999999999999999999999865
Q ss_pred hhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 637 AEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 637 ~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
..... .....++..|.+||......++.++||||||+++|||++|+.||................ . ....
T Consensus 175 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~---~~~~--- 246 (314)
T 3com_A 175 LTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNP--P---PTFR--- 246 (314)
T ss_dssp CBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC--C---CCCS---
T ss_pred hhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC--C---cccC---
Confidence 43321 122234456788999888889999999999999999999999997644322111111100 0 0000
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
....++ ..+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 247 ~~~~~~----~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~ 285 (314)
T 3com_A 247 KPELWS----DNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA 285 (314)
T ss_dssp SGGGSC----HHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTC
T ss_pred CcccCC----HHHHHHHHHHccCChhhCcCHHHHHhCHHHhcC
Confidence 011223 348899999999999999999999999998643
No 150
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.3e-39 Score=341.65 Aligned_cols=257 Identities=10% Similarity=0.051 Sum_probs=203.7
Q ss_pred cCCCCcCccccCCceeEEEEEe-CCCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL-TDGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||.||+|+. .+|+.||||++... ...+.+.+|+.+++++ +|+|++++++++.+.. .
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~-------~ 80 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGL-------H 80 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETT-------E
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCc-------e
Confidence 4688899999999999999996 47999999998643 2345689999999999 7999999999987533 4
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce-----eeecCCC
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH-----VKINSYN 632 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~-----~kl~DFG 632 (769)
.++||||+ +++|.+++...+..+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 81 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg 156 (298)
T 1csn_A 81 NVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 156 (298)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred eEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence 89999999 8999999986555799999999999999999999998 9999999999999987776 9999999
Q ss_pred CchhhhccCC---------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh----HHHHhhhhh
Q 004195 633 LPLLAEARGK---------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV----VLVKDLLQV 699 (769)
Q Consensus 633 la~~~~~~~~---------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~----~~~~~~~~~ 699 (769)
+++....... ....++..|++||...+..++.++|||||||++|||+||+.||..... .........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 236 (298)
T 1csn_A 157 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK 236 (298)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHH
T ss_pred cccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhh
Confidence 9976543221 223345678889999888899999999999999999999999976321 111111111
Q ss_pred ccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
... ...+.....+++ .+.+++.+||+.||++||++++|++.+....+..+
T Consensus 237 ~~~-------~~~~~~~~~~~~----~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 237 KQS-------TPLRELCAGFPE----EFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HHH-------SCHHHHTTTSCH----HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ccC-------ccHHHHHhhCcH----HHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 000 000111123343 48899999999999999999999999987755433
No 151
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=371.54 Aligned_cols=246 Identities=17% Similarity=0.237 Sum_probs=197.5
Q ss_pred ccccCCceeEEEEEeC---CCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEEEE
Q 004195 487 FMCDASHGQIYKGKLT---DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYLIF 562 (769)
Q Consensus 487 ~iG~G~~g~Vy~~~~~---~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~lV~ 562 (769)
.||+|+||.||+|.+. ++..||||+++... ....+++.+|++++++++|||||+++++|.+. ..++||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~--------~~~lv~ 414 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE--------ALMLVM 414 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESS--------SEEEEE
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccC--------CeEEEE
Confidence 7999999999999864 46689999998653 33467899999999999999999999999752 279999
Q ss_pred eccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCC
Q 004195 563 EYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGK 642 (769)
Q Consensus 563 Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~ 642 (769)
|||++|+|.+++......+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 415 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~ 491 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491 (613)
T ss_dssp ECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred EeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence 99999999999986666799999999999999999999999 999999999999999999999999999976533221
Q ss_pred -----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 643 -----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 643 -----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
....++..|++||.+....++.++|||||||++|||+| |+.||.......+...+.... .....
T Consensus 492 ~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~----------~~~~p 561 (613)
T 2ozo_A 492 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK----------RMECP 561 (613)
T ss_dssp ----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTC----------CCCCC
T ss_pred eeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC----------CCCCC
Confidence 11112346889999988899999999999999999998 999997654333333222110 11111
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+++ ++.+++.+||+.||++||++.+|++.+...-.
T Consensus 562 ~~~~~----~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 598 (613)
T 2ozo_A 562 PECPP----ELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 598 (613)
T ss_dssp TTCCH----HHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CcCCH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 23444 48899999999999999999999988875533
No 152
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=348.05 Aligned_cols=253 Identities=18% Similarity=0.285 Sum_probs=198.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcE----EEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTL----VAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~----vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|+..+.||+|+||.||+|+.. +++. ||+|.+.... ....+.+.+|+.++++++||||++++++|.+..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~---- 90 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST---- 90 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS----
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC----
Confidence 46888999999999999999964 4554 5777775442 344678999999999999999999999998532
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
.++|+||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 91 ----~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~ 163 (327)
T 3lzb_A 91 ----VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGL 163 (327)
T ss_dssp ----EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC
T ss_pred ----ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcc
Confidence 6899999999999999986555799999999999999999999999 999999999999999999999999999
Q ss_pred chhhhccCCcc----eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 634 PLLAEARGKGS----AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 634 a~~~~~~~~~~----~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
++......... ..++..|++||.+.+..++.++|||||||++|||+| |++||...........+....
T Consensus 164 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~------- 236 (327)
T 3lzb_A 164 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE------- 236 (327)
T ss_dssp ----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC-------
T ss_pred eeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC-------
Confidence 97654322211 112235788999988899999999999999999999 999998655443333222111
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.......++. .+.+++.+||+.||++|||+.|+++.+.....
T Consensus 237 ---~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 237 ---RLPQPPICTI----DVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ---CCCCCTTBCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred ---CCCCCccCCH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 0111122333 48899999999999999999999999987653
No 153
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.6e-39 Score=365.45 Aligned_cols=256 Identities=19% Similarity=0.252 Sum_probs=206.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+..
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----- 99 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG----- 99 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----
Confidence 356888999999999999999976 79999999996543 334577999999999999999999999998643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee---CCCceeeecCC
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL---DENFHVKINSY 631 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~kl~DF 631 (769)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+||
T Consensus 100 --~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Df 173 (484)
T 3nyv_A 100 --YFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDF 173 (484)
T ss_dssp --EEEEEECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCT
T ss_pred --EEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEee
Confidence 4899999999999999997654 699999999999999999999999 99999999999999 56789999999
Q ss_pred CCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhc-ccccccccc
Q 004195 632 NLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVN-IGTDEARKS 709 (769)
Q Consensus 632 Gla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~-~~~~~~~~~ 709 (769)
|+++....... ....++..|++||.+.+ .++.++||||+||++|||++|++||...........+... ...
T Consensus 174 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~------ 246 (484)
T 3nyv_A 174 GLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF------ 246 (484)
T ss_dssp THHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC------
T ss_pred eeeEEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC------
Confidence 99976543332 22234566788998754 7999999999999999999999999865543332222111 110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
+.......++ .+.+++.+||+.||++|||+.|+++|+|+....
T Consensus 247 --~~~~~~~~s~----~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~ 289 (484)
T 3nyv_A 247 --ELPQWKKVSE----SAKDLIRKMLTYVPSMRISARDALDHEWIQTYT 289 (484)
T ss_dssp --CSGGGGGSCH----HHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHT
T ss_pred --CCcccccCCH----HHHHHHHHHCCCChhHCcCHHHHhhChhhcccc
Confidence 0011112333 488999999999999999999999999997654
No 154
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-39 Score=348.98 Aligned_cols=255 Identities=22% Similarity=0.291 Sum_probs=201.1
Q ss_pred hcCCCCcCccccCCceeEEEEEe------CCCcEEEEEEccccC-CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKL------TDGTLVAIRSLKMSK-KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSL 550 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~ 550 (769)
.++|...+.||+|+||.||+|+. .++..||||+++... ....+.+.+|+.+++++ +||||+++++++.+.+.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 46788899999999999999995 246689999997542 23346799999999999 89999999999986443
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCCC----------------------CCCCHHHHHHHHHHHHHHhcccccCCCCCc
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGPG----------------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 608 (769)
.++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|
T Consensus 124 -------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 193 (344)
T 1rjb_A 124 -------IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SC 193 (344)
T ss_dssp -------CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred -------cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 799999999999999997543 2379999999999999999999999 99
Q ss_pred cccCccccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCC
Q 004195 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRP 683 (769)
Q Consensus 609 vHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~ 683 (769)
+||||||+||+++.++.+||+|||++........ ....++..|++||.+.+..++.++|||||||++|||+| |+.
T Consensus 194 vH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 273 (344)
T 1rjb_A 194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN 273 (344)
T ss_dssp EETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCC
T ss_pred ccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999976543322 12233445888999888899999999999999999998 999
Q ss_pred CCCCchh-HHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 684 ITSENVV-VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 684 p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
||..... ......+... ..+.....+++ .+.+++.+||+.||++|||+.|++++++....
T Consensus 274 p~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 274 PYPGIPVDANFYKLIQNG----------FKMDQPFYATE----EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp SSTTCCCSHHHHHHHHTT----------CCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred CcccCCcHHHHHHHHhcC----------CCCCCCCCCCH----HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 9875432 1222222111 11111122333 48899999999999999999999999987643
No 155
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.8e-39 Score=340.47 Aligned_cols=252 Identities=16% Similarity=0.190 Sum_probs=198.5
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~ 553 (769)
.+++|+..+.||+|+||.||+|+.. +++.||||+++..... ...++.+|+..+.++ +||||+++++++.+.+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~---- 84 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD---- 84 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT----
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC----
Confidence 3567889999999999999999976 7999999999865332 245788999999999 8999999999997643
Q ss_pred CcceEEEEEeccCCCchhhhhcCC---CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC-------
Q 004195 554 SISIIYLIFEYAPNETLRSFISGP---GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN------- 623 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~------- 623 (769)
..++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.+
T Consensus 85 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~ 158 (289)
T 1x8b_A 85 ---HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAAS 158 (289)
T ss_dssp ---EEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------
T ss_pred ---eEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccc
Confidence 489999999999999999732 13689999999999999999999999 99999999999999844
Q ss_pred ------------ceeeecCCCCchhhhccCCcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchh
Q 004195 624 ------------FHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVV 690 (769)
Q Consensus 624 ------------~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~ 690 (769)
..+||+|||.+....... ...++..|++||.+.+. .++.++|||||||++|||++|++|+.....
T Consensus 159 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~ 236 (289)
T 1x8b_A 159 EEGDEDDWASNKVMFKIGDLGHVTRISSPQ--VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ 236 (289)
T ss_dssp -----------CCCEEECCCTTCEETTCSC--CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH
T ss_pred cccccccccCCceEEEEcccccccccCCcc--ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH
Confidence 479999999987654332 22355677889987655 566899999999999999999987654332
Q ss_pred HHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 691 VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
...+... ..+.+...++++ +.+++.+||+.||++|||+.|+++|+|+....
T Consensus 237 --~~~~~~~-----------~~~~~~~~~~~~----~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 287 (289)
T 1x8b_A 237 --WHEIRQG-----------RLPRIPQVLSQE----FTELLKVMIHPDPERRPSAMALVKHSVLLSAS 287 (289)
T ss_dssp --HHHHHTT-----------CCCCCSSCCCHH----HHHHHHHHTCSSGGGSCCHHHHHTCTTC----
T ss_pred --HHHHHcC-----------CCCCCCcccCHH----HHHHHHHHhCCCcccCCCHHHHhhChHhhhhc
Confidence 1111111 012222334444 88999999999999999999999999988643
No 156
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.4e-39 Score=365.92 Aligned_cols=260 Identities=18% Similarity=0.197 Sum_probs=204.5
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-------------CChhHHHHHHHHHhhccCCceeeEee
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-------------SSPHMYTYHIELISKLRHSNLVSALG 543 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-------------~~~~~~~~Ei~~l~~l~H~nIv~l~~ 543 (769)
..++|...+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|+.++++++|||||++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4567999999999999999999976 688999999975431 23467899999999999999999999
Q ss_pred eeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC
Q 004195 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN 623 (769)
Q Consensus 544 ~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~ 623 (769)
+|.+.. ..++|||||++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.+
T Consensus 114 ~~~~~~-------~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~ 182 (504)
T 3q5i_A 114 VFEDKK-------YFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENK 182 (504)
T ss_dssp EEECSS-------EEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESST
T ss_pred EEEcCC-------EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecC
Confidence 998643 4899999999999999987543 689999999999999999999999 99999999999999877
Q ss_pred c---eeeecCCCCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhh
Q 004195 624 F---HVKINSYNLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQV 699 (769)
Q Consensus 624 ~---~~kl~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~ 699 (769)
+ .+||+|||+++....... ....++..|++||.+. ..++.++||||+||++|||++|++||...........+..
T Consensus 183 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~ 261 (504)
T 3q5i_A 183 NSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEK 261 (504)
T ss_dssp TCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred CCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence 5 699999999976543322 2334556778888875 5799999999999999999999999987554333222211
Q ss_pred ccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
.... .+.......++ ++.+++.+||+.||++|||++|+++|+|+......
T Consensus 262 ~~~~-------~~~~~~~~~s~----~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~ 311 (504)
T 3q5i_A 262 GKYY-------FDFNDWKNISD----EAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANN 311 (504)
T ss_dssp CCCC-------CCHHHHTTSCH----HHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCC
T ss_pred CCCC-------CCccccCCCCH----HHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhc
Confidence 1000 01111122333 48899999999999999999999999999865443
No 157
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.6e-39 Score=341.06 Aligned_cols=253 Identities=22% Similarity=0.347 Sum_probs=194.7
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|+..+.||+|+||.||+|+.. ++.||||++... ...+.+.+|++++++++||||+++++++.+. .+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---------~~ 75 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLNP---------VC 75 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTTT---------TE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC---------cE
Confidence 45778899999999999999985 788999999642 3456799999999999999999999988631 58
Q ss_pred EEEeccCCCchhhhhcCCC--CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce-eeecCCCCchh
Q 004195 560 LIFEYAPNETLRSFISGPG--YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH-VKINSYNLPLL 636 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~-~kl~DFGla~~ 636 (769)
+||||+++|+|.+++.... ..+++..+..++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++..
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~ 155 (307)
T 2eva_A 76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD 155 (307)
T ss_dssp EEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---
T ss_pred EEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccc
Confidence 9999999999999998543 24789999999999999999999933238999999999999988876 89999999865
Q ss_pred hhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 637 AEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 637 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
..... ....++..|++||...+..++.++|||||||++|||+||+.||................. ..+...
T Consensus 156 ~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~ 226 (307)
T 2eva_A 156 IQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG--------TRPPLI 226 (307)
T ss_dssp ----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTT--------CCCCCB
T ss_pred ccccc-ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcC--------CCCCcc
Confidence 53322 223356678899999888999999999999999999999999975322111111010000 112222
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..++++ +.+++.+||+.||++|||++|+++++....+
T Consensus 227 ~~~~~~----l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 227 KNLPKP----IESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp TTCCHH----HHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred cccCHH----HHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 334443 8899999999999999999999999987643
No 158
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2e-40 Score=361.32 Aligned_cols=270 Identities=9% Similarity=0.037 Sum_probs=187.5
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhc--cCCceeeEe-------eeee
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKL--RHSNLVSAL-------GHCL 546 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l--~H~nIv~l~-------~~~~ 546 (769)
..|...+.||+|+||.||+|+.. +|+.||||++....... .+.+.+|+.+++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 35778899999999999999975 79999999998754322 34567785555555 699988865 3333
Q ss_pred ccCCC----------CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHH------HHHHHHHHHHhcccccCCCCCccc
Q 004195 547 DFSLD----------DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQR------IAAAIAIVKGVQFLHTGIVPGVFS 610 (769)
Q Consensus 547 ~~~~~----------~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~ivH 610 (769)
..... .......++|||||+ |+|.+++...+..+++..+ ..++.||++||+|||+. +|+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivH 217 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVH 217 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCcc
Confidence 22110 001145899999998 8999999854334566666 78889999999999999 9999
Q ss_pred cCccccceeeCCCceeeecCCCCchhhhccCCcceeecCCCcchhhhcc--CCCCCCCCeeehhHHHHHHHhCCCCCCCc
Q 004195 611 NNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLAR--TEQDDKSDVYDIGIILIEIIVGRPITSEN 688 (769)
Q Consensus 611 rDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~ksDVwS~Gvil~elltG~~p~~~~ 688 (769)
|||||+|||++.++.+||+|||+++....... ....+..|++||.+.+ ..++.++|||||||++|||+||+.||...
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~ 296 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP-ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLV 296 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCEEE-GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBC
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCCcc-CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCc
Confidence 99999999999999999999999976543321 2223367788999876 67999999999999999999999999765
Q ss_pred hhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 689 VVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
.......+....... ........+ ....+++ .+.+++.+||+.||++|||+.|+++|+||......
T Consensus 297 ~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~----~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 362 (371)
T 3q60_A 297 TPGIKGSWKRPSLRV-PGTDSLAFG-SCTPLPD----FVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNE 362 (371)
T ss_dssp CTTCTTCCCBCCTTS-CCCCSCCCT-TSSCCCH----HHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHHH
T ss_pred Ccccccchhhhhhhh-ccccccchh-hccCCCH----HHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHHH
Confidence 322111100000000 000000001 1123333 48899999999999999999999999999865443
No 159
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5.1e-39 Score=348.79 Aligned_cols=281 Identities=16% Similarity=0.217 Sum_probs=198.2
Q ss_pred HHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 473 DELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 473 ~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
.+.....++|...+.||+|+||.||+|+.. +|+.||||++.... .....+.+|++.++.++||||++++++|.+....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 445667789999999999999999999975 69999999986543 3345677888889999999999999999765443
Q ss_pred CCCcceEEEEEeccCCCchhhhhc---CCCCCCCHHHHHHHHHHHHHHhcccc--cCCCCCccccCccccceeeCC-Cce
Q 004195 552 DPSISIIYLIFEYAPNETLRSFIS---GPGYKLTWVQRIAAAIAIVKGVQFLH--TGIVPGVFSNNLKITDVLLDE-NFH 625 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~ivHrDlKp~NILld~-~~~ 625 (769)
.......++||||+++ +|.+.+. .....+++..+..++.|++.||+||| +. +|+||||||+|||++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCc
Confidence 3334457899999986 5544433 33447899999999999999999999 77 9999999999999997 899
Q ss_pred eeecCCCCchhhhccCC-cceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccc
Q 004195 626 VKINSYNLPLLAEARGK-GSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIG 702 (769)
Q Consensus 626 ~kl~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~ 702 (769)
+||+|||+++....... ....++..|++||.+.+. .++.++|||||||++|||+||++||....... ...+......
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~ 250 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGC 250 (360)
T ss_dssp EEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred EEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCC
Confidence 99999999976543322 222334567889987554 48999999999999999999999997654322 2222211111
Q ss_pred cccccccccCc----------------cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 703 TDEARKSIVDP----------------AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 703 ~~~~~~~~~d~----------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.........++ ............++.+++.+||+.||++|||+.|+++|+||....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 251 PSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp CCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred CCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 10000000000 000111122355699999999999999999999999999998653
No 160
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3e-39 Score=340.25 Aligned_cols=253 Identities=19% Similarity=0.279 Sum_probs=204.7
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC---ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS---SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~---~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +++.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------ 88 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND------ 88 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS------
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC------
Confidence 46778899999999999999976 6889999999755322 2356889999999999999999999997643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++++|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 89 -~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 163 (294)
T 2rku_A 89 -FVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLAT 163 (294)
T ss_dssp -EEEEEEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred -EEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCce
Confidence 4899999999999999987543 689999999999999999999999 99999999999999999999999999986
Q ss_pred hhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 636 LAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 636 ~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
...... .....++..|.+||...+..++.++||||||+++|||+||+.||...........+... ..
T Consensus 164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-----------~~ 232 (294)
T 2rku_A 164 KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----------EY 232 (294)
T ss_dssp ECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT-----------CC
T ss_pred ecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhc-----------cC
Confidence 553222 12223455678899988888999999999999999999999999765433221111100 01
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.+....++ .+.+++.+||+.||++|||++|+++|+|+....
T Consensus 233 ~~~~~~~~----~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~ 273 (294)
T 2rku_A 233 SIPKHINP----VAASLIQKMLQTDPTARPTINELLNDEFFTSGY 273 (294)
T ss_dssp CCCTTSCH----HHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred CCccccCH----HHHHHHHHHcccChhhCcCHHHHhhChheecCC
Confidence 11122333 488999999999999999999999999997543
No 161
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.2e-39 Score=350.81 Aligned_cols=269 Identities=16% Similarity=0.287 Sum_probs=204.2
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
..++|...+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|++++++++||||+++++++...... ..
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~ 102 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIE--QM 102 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTT--TC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcc--cc
Confidence 3457889999999999999999975 7889999999753322 235688999999999999999999999764321 23
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...++||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 103 ~~~~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 103 KDVYIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp CCEEEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred ceEEEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceE
Confidence 45899999997 6999998754 589999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCC-----cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccc--cc
Q 004195 636 LAEARGK-----GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTD--EA 706 (769)
Q Consensus 636 ~~~~~~~-----~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~--~~ 706 (769)
....... ....++..|++||.+.+ ..++.++|||||||++|||+||++||....... ...+... .... +.
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~ 255 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI-LGSPSQED 255 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHH-HCSCCHHH
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHH-hCCCCHHH
Confidence 6543221 12234556778997654 458999999999999999999999997644322 2221111 1100 00
Q ss_pred cccc------------cC------ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 707 RKSI------------VD------PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 707 ~~~~------------~d------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
+... .. ....... ..++.+++.+||+.||++|||++|+++|+|+.....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~ 322 (364)
T 3qyz_A 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 322 (364)
T ss_dssp HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred HHHhhhhhHHHHHHhcCCccCCCHHHhCCCC----CHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccC
Confidence 0000 00 0011122 234889999999999999999999999999986533
No 162
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.6e-39 Score=338.46 Aligned_cols=255 Identities=16% Similarity=0.257 Sum_probs=200.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeCC----CcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTD----GTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~----g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
.++|...+.||+|+||.||+|+..+ +..||||.++.... ...+.+.+|+.++++++||||+++++++.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---- 86 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP---- 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSS----
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC----
Confidence 4568888999999999999998542 34699999975422 23467899999999999999999999986422
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
.++||||+++++|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 87 ----~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 159 (281)
T 3cc6_A 87 ----TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGL 159 (281)
T ss_dssp ----CEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCG
T ss_pred ----CEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCC
Confidence 5899999999999999986555799999999999999999999999 999999999999999999999999999
Q ss_pred chhhhccCC---cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 634 PLLAEARGK---GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 634 a~~~~~~~~---~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
+........ .....+..|++||......++.++|||||||++|||+| |+.||...........+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~-------- 231 (281)
T 3cc6_A 160 SRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD-------- 231 (281)
T ss_dssp GGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTC--------
T ss_pred CcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCC--------
Confidence 876543221 11122335788999888889999999999999999998 999986543322222221110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.+.....+++ .+.+++.+||+.||++|||+.|+++++....+.
T Consensus 232 --~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 232 --RLPKPDLCPP----VLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp --CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCCCCCCCH----HHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 0111122333 488999999999999999999999999876543
No 163
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=4.7e-39 Score=334.22 Aligned_cols=252 Identities=16% Similarity=0.285 Sum_probs=199.0
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||.||+|+.+ |+.||||+++...... .+.+.+|+.++++++||||+++++++.+.. ...
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 83 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP-----APH 83 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTT-----SSS
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCC-----CCC
Confidence 46778899999999999999985 8899999998653222 356899999999999999999999997642 134
Q ss_pred EEEEEeccCCCchhhhhcCCCC-CCCHHHHHHHHHHHHHHhcccccCCCCC--ccccCccccceeeCCCceeeecCCCCc
Q 004195 558 IYLIFEYAPNETLRSFISGPGY-KLTWVQRIAAAIAIVKGVQFLHTGIVPG--VFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.++||||+++|+|.+++..... .+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+||+|||++
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~ 160 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVK 160 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSC
T ss_pred eEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccce
Confidence 7999999999999999985442 589999999999999999999997 7 999999999999999999999988876
Q ss_pred hhhhccCCcceeecCCCcchhhhccCCCCC---CCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 635 LLAEARGKGSAEVSSPAKKTSVLARTEQDD---KSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~---ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
..... ....++..|++||.+.+..++. ++|||||||++|||+||+.||.............. ...
T Consensus 161 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~---------~~~ 228 (271)
T 3kmu_A 161 FSFQS---PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVAL---------EGL 228 (271)
T ss_dssp CTTSC---TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHH---------SCC
T ss_pred eeecc---cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHh---------cCC
Confidence 44322 1223456678899887655544 79999999999999999999976543322111110 011
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+.....+++ .+.+++.+||+.||++|||++|+++.+....
T Consensus 229 ~~~~~~~~~~----~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 229 RPTIPPGISP----HVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred CCCCCCCCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 1222233444 4889999999999999999999999987653
No 164
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=4.2e-39 Score=363.64 Aligned_cols=256 Identities=18% Similarity=0.228 Sum_probs=203.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc--CCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS--KKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|...+.||+|+||+||+|+.. +|+.||||++... .......+.+|++++++++|||||++++++.+..
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------ 94 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS------ 94 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS------
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC------
Confidence 456888999999999999999976 7999999999643 2345678999999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC---CCceeeecCCC
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD---ENFHVKINSYN 632 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld---~~~~~kl~DFG 632 (769)
..++|||||++|+|.+.+.... .+++..+..++.|++.||+|||+. +|+||||||+|||++ .++.+||+|||
T Consensus 95 -~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg 169 (486)
T 3mwu_A 95 -SFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFG 169 (486)
T ss_dssp -EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCS
T ss_pred -EEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECC
Confidence 4899999999999999887543 689999999999999999999999 999999999999995 45679999999
Q ss_pred CchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhh-hhccccccccccc
Q 004195 633 LPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLL-QVNIGTDEARKSI 710 (769)
Q Consensus 633 la~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~ 710 (769)
+++....... ....++..|++||.+. +.++.++||||+||++|||++|++||...........+ ......
T Consensus 170 ~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~------- 241 (486)
T 3mwu_A 170 LSTCFQQNTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF------- 241 (486)
T ss_dssp CTTTBCCC----CCTTGGGGCCGGGGG-SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCS-------
T ss_pred cCeECCCCCccCCCcCCCCCCCHHHhC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-------
Confidence 9976543322 2233455678888875 46999999999999999999999999765443322222 111110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
+.......++ .+.+++.+||+.||++|||+.|+++|+|+....
T Consensus 242 -~~~~~~~~s~----~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~ 284 (486)
T 3mwu_A 242 -DLPQWRTISD----DAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284 (486)
T ss_dssp -CSGGGGGSCH----HHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTC
T ss_pred -CCcccCCCCH----HHHHHHHHHcCCChhhCcCHHHHhcCHhhccCc
Confidence 1111122333 488999999999999999999999999997643
No 165
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1e-39 Score=345.26 Aligned_cols=264 Identities=17% Similarity=0.277 Sum_probs=186.1
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|...+.||+|+||.||+|+.. +++.||||++.... ....+++.+|++++++++||||+++++++.+.+.
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------ 87 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE------ 87 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSC------
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCC------
Confidence 467888999999999999999965 78999999997543 2334678899999999999999999999986443
Q ss_pred eEEEEEeccCCCchhhhhcC-------CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeec
Q 004195 557 IIYLIFEYAPNETLRSFISG-------PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKIN 629 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~ 629 (769)
.++||||+++++|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 88 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 163 (303)
T 2vwi_A 88 -LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIA 163 (303)
T ss_dssp -EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred -cEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEE
Confidence 8999999999999999862 234689999999999999999999999 99999999999999999999999
Q ss_pred CCCCchhhhccC-------CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcc
Q 004195 630 SYNLPLLAEARG-------KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNI 701 (769)
Q Consensus 630 DFGla~~~~~~~-------~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~ 701 (769)
|||++....... .....++..|++||.... ..++.++|||||||++|||+||+.||...............
T Consensus 164 dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~- 242 (303)
T 2vwi_A 164 DFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN- 242 (303)
T ss_dssp CCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTS-
T ss_pred eccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhcc-
Confidence 999986543221 112234556788988765 56899999999999999999999999764332211111000
Q ss_pred ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 702 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..........++.....++++ +.+++.+||+.||++|||+.|+++|+||...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~----~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 294 (303)
T 2vwi_A 243 DPPSLETGVQDKEMLKKYGKS----FRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294 (303)
T ss_dssp SCCCTTC-----CCCCCCCHH----HHHHHHHHCCSSGGGSCCHHHHHTSTTC---
T ss_pred CCCccccccccchhhhhhhHH----HHHHHHHHccCChhhCcCHHHHhhChhhhcC
Confidence 000011111222233344444 8899999999999999999999999998754
No 166
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=4e-39 Score=363.79 Aligned_cols=256 Identities=18% Similarity=0.218 Sum_probs=205.2
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC---CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+..
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~----- 258 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT----- 258 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC-----
Confidence 367888899999999999999976 69999999997542 334567889999999999999999999987643
Q ss_pred cceEEEEEeccCCCchhhhhcCC---CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCC
Q 004195 555 ISIIYLIFEYAPNETLRSFISGP---GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
..|+||||+++|+|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 259 --~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DF 333 (543)
T 3c4z_A 259 --DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDL 333 (543)
T ss_dssp --EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred --EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeec
Confidence 489999999999999998743 34699999999999999999999999 9999999999999999999999999
Q ss_pred CCchhhhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccccccccc
Q 004195 632 NLPLLAEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEARK 708 (769)
Q Consensus 632 Gla~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~ 708 (769)
|+++....... ....++..|++||.+.+..++.++|||||||++|||+||++||...... ....+.+.....
T Consensus 334 Gla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~----- 408 (543)
T 3c4z_A 334 GLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ----- 408 (543)
T ss_dssp TTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC-----
T ss_pred ceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc-----
Confidence 99976543322 2234566788999998889999999999999999999999999754210 001111100000
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCC-----HHHHHHHhHhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPS-----VEDTLWNLQFAT 756 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~l~~~~ 756 (769)
.......+++ .+.+++.+||+.||++||+ ++|+++|+||..
T Consensus 409 ---~~~~p~~~s~----~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~ 454 (543)
T 3c4z_A 409 ---AVTYPDKFSP----ASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454 (543)
T ss_dssp ---CCCCCTTSCH----HHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTT
T ss_pred ---ccCCCcccCH----HHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccC
Confidence 0111122333 4889999999999999996 489999999975
No 167
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.8e-39 Score=348.67 Aligned_cols=254 Identities=19% Similarity=0.278 Sum_probs=205.7
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC---ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS---SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~---~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|...+.||+|+||.||+|+.. +++.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 114 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND----- 114 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-----
Confidence 356888999999999999999976 5889999999755322 2356889999999999999999999998643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+++++|.+++.... .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 115 --~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 188 (335)
T 2owb_A 115 --FVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA 188 (335)
T ss_dssp --EEEEEECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred --eEEEEEecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCc
Confidence 4899999999999999987543 689999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 635 LLAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 635 ~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
+...... .....++..|++||.+.+..++.++|||||||++|||+||+.||...........+... .
T Consensus 189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~-----------~ 257 (335)
T 2owb_A 189 TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN-----------E 257 (335)
T ss_dssp EECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT-----------C
T ss_pred eecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC-----------C
Confidence 6553222 12233455688899998888999999999999999999999999765432221111110 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
..+...+++ .+.+++.+||+.||++|||++|+++|+||....
T Consensus 258 ~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~ 299 (335)
T 2owb_A 258 YSIPKHINP----VAASLIQKMLQTDPTARPTINELLNDEFFTSGY 299 (335)
T ss_dssp CCCCTTSCH----HHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSC
T ss_pred CCCCccCCH----HHHHHHHHHccCChhHCcCHHHHhcCccccCCC
Confidence 111122333 388999999999999999999999999997543
No 168
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.6e-39 Score=339.54 Aligned_cols=255 Identities=22% Similarity=0.319 Sum_probs=206.2
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
..++|...+.||+|+||.||+|+.. ++..||||.+... ....+.+.+|++++++++||||+++++++.+...
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~------ 83 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP------ 83 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS------
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC------
Confidence 3456888899999999999999976 5889999999753 2345679999999999999999999999976443
Q ss_pred eEEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 557 IIYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
.++||||+++++|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 84 -~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~ 159 (288)
T 3kfa_A 84 -FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 159 (288)
T ss_dssp -EEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGG
T ss_pred -EEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccce
Confidence 8999999999999999973 334699999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCC---cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 636 LAEARGK---GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 636 ~~~~~~~---~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
....... ....++..|.+||......++.++||||||+++|||++ |++||...........+... .
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~----------~ 229 (288)
T 3kfa_A 160 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD----------Y 229 (288)
T ss_dssp TSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT----------C
T ss_pred eccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcc----------C
Confidence 6543322 12223345788999888899999999999999999999 99998765433332222211 1
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+.....+++ .+.+++.+|++.||++|||++|+++.+....+
T Consensus 230 ~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 230 RMERPEGCPE----KVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCH----HHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 1111123333 48899999999999999999999998886543
No 169
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.1e-39 Score=344.91 Aligned_cols=266 Identities=20% Similarity=0.298 Sum_probs=198.4
Q ss_pred CCCCcCccccCCceeEEEEEe-----CCCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKL-----TDGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.|+..+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|++++++++||||+++++++.+...
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~---- 97 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG---- 97 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC----
Confidence 477789999999999999983 368999999998543 3345779999999999999999999999986422
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
...++||||+++|+|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 98 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 98 -NGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred -ceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccc
Confidence 337999999999999999965545799999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhccCC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc--cccc
Q 004195 635 LLAEARGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT--DEAR 707 (769)
Q Consensus 635 ~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~--~~~~ 707 (769)
+....... ....++..|++||.+.+..++.++|||||||++|||+||+.|+.......... ....... ....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~ 252 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKM-IGPTHGQMTVTRL 252 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH-HCSCCGGGHHHHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhc-cCCcccccCHHHH
Confidence 76543321 11222334788999888889999999999999999999998865432111100 0000000 0000
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
............+...+..+.+++.+||+.||++|||+.|+++.+...
T Consensus 253 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 253 VNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 000000111111222334489999999999999999999999988753
No 170
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-39 Score=345.58 Aligned_cols=253 Identities=19% Similarity=0.333 Sum_probs=195.6
Q ss_pred CCCCcCccccCCceeEEEEEeCC-----CcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTD-----GTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~-----g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
+|...+.||+|+||.||+|+... +..||||.++.... .....+.+|++++++++||||+++++++.+...
T Consensus 45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 120 (333)
T 1mqb_A 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP---- 120 (333)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS----
T ss_pred HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC----
Confidence 45567899999999999998642 24699999975432 123468899999999999999999999976433
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 121 ---~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 194 (333)
T 1mqb_A 121 ---MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLS 194 (333)
T ss_dssp ---EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred ---cEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcc
Confidence 8999999999999999986555799999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhccCCcc-----eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 635 LLAEARGKGS-----AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 635 ~~~~~~~~~~-----~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
+......... ...+..|++||.+....++.++|||||||++|||+| |+.||...........+....
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~------- 267 (333)
T 1mqb_A 195 RVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF------- 267 (333)
T ss_dssp ----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC-------
T ss_pred hhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCC-------
Confidence 7654322111 111235788999888899999999999999999999 999997654333222221110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+.....+++ .+.+++.+||+.||++||++.|++++++....
T Consensus 268 ---~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 309 (333)
T 1mqb_A 268 ---RLPTPMDCPS----AIYQLMMQCWQQERARRPKFADIVSILDKLIR 309 (333)
T ss_dssp ---CCCCCTTCBH----HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ---cCCCcccCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0111122333 48899999999999999999999999986644
No 171
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.2e-40 Score=350.30 Aligned_cols=265 Identities=18% Similarity=0.264 Sum_probs=184.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhh--ccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISK--LRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~--l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|...+.||+|+||.||+|+.. |+.||||++.. .....+.+|.+++.. ++||||+++++++.+... ...
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~---~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~---~~~ 74 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDNG---TWT 74 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC----TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECS---SSE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEecc---cchhhHHHHHHHHHHHhccCcceeeeeeecccCCC---ccc
Confidence 357889999999999999999875 88999999863 345678889998887 789999999999986432 123
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccc--------cCCCCCccccCccccceeeCCCceeee
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLH--------TGIVPGVFSNNLKITDVLLDENFHVKI 628 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDlKp~NILld~~~~~kl 628 (769)
..++||||+++|+|.+++.+. .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl 149 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-B
T ss_pred eeEEEEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEE
Confidence 589999999999999999754 5788899999999999999999 66 9999999999999999999999
Q ss_pred cCCCCchhhhccCC------cceeecCCCcchhhhccC------CCCCCCCeeehhHHHHHHHhC----------CCCCC
Q 004195 629 NSYNLPLLAEARGK------GSAEVSSPAKKTSVLART------EQDDKSDVYDIGIILIEIIVG----------RPITS 686 (769)
Q Consensus 629 ~DFGla~~~~~~~~------~~~~~~~~~~~pe~~~~~------~~~~ksDVwS~Gvil~elltG----------~~p~~ 686 (769)
+|||+++....... ....++..|++||.+.+. .++.++|||||||++|||+|| +.||.
T Consensus 150 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~ 229 (303)
T 3gxj_A 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229 (303)
T ss_dssp CCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTT
T ss_pred eecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccc
Confidence 99999965433221 112345677889987665 344689999999999999999 44443
Q ss_pred CchhH--HHHhhhhhccccccccccccCccccCCC-CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhccc
Q 004195 687 ENVVV--LVKDLLQVNIGTDEARKSIVDPAVMNEC-SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGL 761 (769)
Q Consensus 687 ~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~ 761 (769)
..... ........ .......+.....+ ..+....+.+++.+||+.||++|||++|+++.+....+..+.
T Consensus 230 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~~~ 301 (303)
T 3gxj_A 230 DLVPSDPSVEEMRKV------VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 301 (303)
T ss_dssp TTCC-CCCCC-CHHH------HTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC---
T ss_pred ccCCCCccHHHHHHH------HHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhccc
Confidence 21100 00000000 00001112111111 125667799999999999999999999999999877654443
No 172
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.4e-39 Score=351.59 Aligned_cols=268 Identities=14% Similarity=0.231 Sum_probs=204.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCCh-----------------hHHHHHHHHHhhccCCceeeE
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSP-----------------HMYTYHIELISKLRHSNLVSA 541 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~-----------------~~~~~Ei~~l~~l~H~nIv~l 541 (769)
.++|...+.||+|+||.||+|+. +|+.||||++........ +.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35788899999999999999999 899999999975422111 789999999999999999999
Q ss_pred eeeeeccCCCCCCcceEEEEEeccCCCchhhh------hcCC-CCCCCHHHHHHHHHHHHHHhccccc-CCCCCccccCc
Q 004195 542 LGHCLDFSLDDPSISIIYLIFEYAPNETLRSF------ISGP-GYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNL 613 (769)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~------l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDl 613 (769)
++++.+.+ ..++||||+++|+|.++ +... ...+++..+..++.|+++||+|||+ . +|+||||
T Consensus 109 ~~~~~~~~-------~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl 178 (348)
T 2pml_X 109 EGIITNYD-------EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDV 178 (348)
T ss_dssp SEEEESSS-------EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCC
T ss_pred EEEEeeCC-------eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCC
Confidence 99998643 48999999999999998 6542 4579999999999999999999998 7 9999999
Q ss_pred cccceeeCCCceeeecCCCCchhhhccCCcceeecCCCcchhhhccC-CCCC-CCCeeehhHHHHHHHhCCCCCCCchh-
Q 004195 614 KITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLART-EQDD-KSDVYDIGIILIEIIVGRPITSENVV- 690 (769)
Q Consensus 614 Kp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~-ksDVwS~Gvil~elltG~~p~~~~~~- 690 (769)
||+||+++.++.+||+|||.+............++..|++||...+. .++. ++|||||||++|||+||+.||.....
T Consensus 179 ~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 258 (348)
T 2pml_X 179 KPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL 258 (348)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS
T ss_pred ChHhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH
Confidence 99999999999999999999976533322333445567889988766 5666 99999999999999999999976432
Q ss_pred HHH-HhhhhhccccccccccccCcccc---CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 691 VLV-KDLLQVNIGTDEARKSIVDPAVM---NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 691 ~~~-~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
... ..+................+... ..........+.+++.+||+.||++|||++|+++|+||...
T Consensus 259 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~ 329 (348)
T 2pml_X 259 VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT 329 (348)
T ss_dssp HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence 222 22111111111000000000000 00011223458999999999999999999999999998753
No 173
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=9e-39 Score=348.11 Aligned_cols=269 Identities=15% Similarity=0.200 Sum_probs=198.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.+++.++||||+++++++...... ...
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~-~~~ 102 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSL-EEF 102 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCST-TTC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccc-ccc
Confidence 357888999999999999999965 6899999999754322 235688999999999999999999999754321 123
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...++||||++ |+|.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 103 ~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 103 QDVYIVMELMD-ANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp CEEEEEEECCS-EEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred cceEEEEEcCC-CCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 46899999997 588888863 489999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccc-cc------
Q 004195 636 LAEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTD-EA------ 706 (769)
Q Consensus 636 ~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~-~~------ 706 (769)
...... .....++..|++||.+.+..++.++|||||||++|||+||+.||....... ...++.. .... ..
T Consensus 176 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 176 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ-LGTPCPEFMKKLQ 254 (371)
T ss_dssp --------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC--CCCCCHHHHTTSC
T ss_pred ccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-hCCCCHHHHHHhh
Confidence 654332 222345567889999988889999999999999999999999997654322 2221111 0000 00
Q ss_pred -----------------cccccCccccCC---CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 707 -----------------RKSIVDPAVMNE---CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 707 -----------------~~~~~d~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
+.........+. ........+.+++.+||+.||++|||++|+++|+|+..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 324 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 324 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence 000000000000 11223567899999999999999999999999999874
No 174
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.3e-38 Score=336.08 Aligned_cols=267 Identities=18% Similarity=0.294 Sum_probs=200.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|+..+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 75 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN------- 75 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT-------
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCC-------
Confidence 57888999999999999999976 799999999975432 23467889999999999999999999998643
Q ss_pred eEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 557 IIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||++ |+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 76 ~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 151 (299)
T 2r3i_A 76 KLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR 151 (299)
T ss_dssp EEEEEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHH
T ss_pred ceEEEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhh
Confidence 4899999997 6999998733 24689999999999999999999999 99999999999999999999999999987
Q ss_pred hhhccC--CcceeecCCCcchhhhccCC-CCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhcccccc-ccccc
Q 004195 636 LAEARG--KGSAEVSSPAKKTSVLARTE-QDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDE-ARKSI 710 (769)
Q Consensus 636 ~~~~~~--~~~~~~~~~~~~pe~~~~~~-~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~-~~~~~ 710 (769)
...... .....++..|.+||...+.. ++.++|||||||++|||+||+.||....... ............. .+...
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (299)
T 2r3i_A 152 AFGVPVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 231 (299)
T ss_dssp HHCCCSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTG
T ss_pred hccCCccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHh
Confidence 654321 22233456678899887654 7999999999999999999999997654322 2222111100000 00000
Q ss_pred -----cCccccC----C---CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 711 -----VDPAVMN----E---CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 711 -----~d~~~~~----~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+.... . ..+....++.+++.+|++.||++|||+.|+++|+|+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~ 290 (299)
T 2r3i_A 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 290 (299)
T ss_dssp GGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred hcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhcC
Confidence 0011000 0 001123458899999999999999999999999999753
No 175
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=4.7e-39 Score=345.34 Aligned_cols=256 Identities=19% Similarity=0.330 Sum_probs=202.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC--------CCcEEEEEEccccCC-CChhHHHHHHHHHhhc-cCCceeeEeeeeecc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT--------DGTLVAIRSLKMSKK-SSPHMYTYHIELISKL-RHSNLVSALGHCLDF 548 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~--------~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~ 548 (769)
.++|...+.||+|+||.||+|+.. ++..||||+++.... ...+.+.+|+++++++ +||||++++++|.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 357888999999999999999863 467899999975422 1235688999999999 899999999999764
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcCCC---------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCc
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISGPG---------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNL 613 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl 613 (769)
+. .++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||
T Consensus 114 ~~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dl 183 (334)
T 2pvf_A 114 GP-------LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDL 183 (334)
T ss_dssp SC-------CEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred Cc-------eEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCC
Confidence 43 799999999999999997442 2489999999999999999999999 9999999
Q ss_pred cccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCc
Q 004195 614 KITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSEN 688 (769)
Q Consensus 614 Kp~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~ 688 (769)
||+||+++.++.+||+|||+++....... .....+..|++||.+.+..++.++|||||||++|||+| |+.||...
T Consensus 184 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 263 (334)
T 2pvf_A 184 AARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263 (334)
T ss_dssp SGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC
Confidence 99999999999999999999965543221 11122345788998888889999999999999999999 99999765
Q ss_pred hhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 689 VVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
........+.... .+.....+++ .+.+++.+||+.||++|||+.|+++++..+...
T Consensus 264 ~~~~~~~~~~~~~----------~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 264 PVEELFKLLKEGH----------RMDKPANCTN----ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp CHHHHHHHHHHTC----------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCC----------CCCCCccCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 4433322221110 1111223343 488999999999999999999999999876543
No 176
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.3e-39 Score=336.60 Aligned_cols=252 Identities=16% Similarity=0.228 Sum_probs=200.9
Q ss_pred CCCCcC-ccccCCceeEEEEEeC---CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 481 CFDSSS-FMCDASHGQIYKGKLT---DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 481 ~f~~~~-~iG~G~~g~Vy~~~~~---~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
+|...+ .||+|+||.||+|++. ++..||||+++.... ...+.+.+|++++++++||||+++++++.. +
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~------ 82 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E------ 82 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-S------
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC-C------
Confidence 444455 8999999999999854 578899999986422 234678899999999999999999999843 2
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..++||||+++++|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 83 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~ 158 (287)
T 1u59_A 83 -ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSK 158 (287)
T ss_dssp -SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCE
T ss_pred -CcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECccccee
Confidence 27999999999999999986666799999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 636 LAEARGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 636 ~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
....... ....++..|++||......++.++|||||||++|||+| |+.||...........+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~--------- 229 (287)
T 1u59_A 159 ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG--------- 229 (287)
T ss_dssp ECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTT---------
T ss_pred eeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcC---------
Confidence 6533221 11122345788998888889999999999999999999 99999765433322222111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+.....+++ .+.+++.+||+.||++||++.|++++++....
T Consensus 230 -~~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 272 (287)
T 1u59_A 230 -KRMECPPECPP----ELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 272 (287)
T ss_dssp -CCCCCCTTCCH----HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CcCCCCCCcCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 01112223344 48899999999999999999999999997643
No 177
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=8.6e-39 Score=335.94 Aligned_cols=255 Identities=21% Similarity=0.311 Sum_probs=191.1
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|...+.||+|+||.||+|+.. ..||||+++...... .+.+.+|++++++++||||+++++++...
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-------- 92 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP-------- 92 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--------
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC--------
Confidence 346888899999999999999864 359999997653322 35689999999999999999999976532
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+++++|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 169 (289)
T 3og7_A 93 QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATE 169 (289)
T ss_dssp SCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC----
T ss_pred ccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccc
Confidence 26999999999999999986666799999999999999999999999 999999999999999999999999999865
Q ss_pred hhccC----CcceeecCCCcchhhhc---cCCCCCCCCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhccccccccc
Q 004195 637 AEARG----KGSAEVSSPAKKTSVLA---RTEQDDKSDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 637 ~~~~~----~~~~~~~~~~~~pe~~~---~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~ 708 (769)
..... .....++..|++||.+. ...++.++|||||||++|||+||+.||..... ......+...... ..
T Consensus 170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~-- 246 (289)
T 3og7_A 170 KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS-PD-- 246 (289)
T ss_dssp --------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCC-CC--
T ss_pred cccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccC-cc--
Confidence 43211 12223456678899875 56688899999999999999999999976332 2222222111000 00
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
-+.....++ ..+.+++.+||+.||++|||+.|+++.+....
T Consensus 247 ---~~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 247 ---LSKVRSNCP----KRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp ---TTSSCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred ---hhhccccCC----HHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 011122333 34899999999999999999999999987653
No 178
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.6e-39 Score=351.15 Aligned_cols=266 Identities=18% Similarity=0.268 Sum_probs=187.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++...... ...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~-~~~ 106 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL-EEF 106 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSG-GGC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcc-ccC
Confidence 357888999999999999999965 7999999999754222 235688999999999999999999998753210 012
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...++|+||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred CeEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 3479999999 68999998753 699999999999999999999998 99999999999999999999999999997
Q ss_pred hhhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhccccc--ccccccc
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTD--EARKSIV 711 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 711 (769)
..... .....++..|++||.+.+ ..++.++||||+||++|||+||++||.+..... ...+... .+.. +.+..+.
T Consensus 181 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~-~g~p~~~~~~~~~ 258 (367)
T 2fst_X 181 HTADE-MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL-VGTPGAELLKKIS 258 (367)
T ss_dssp -----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH-HCSCCHHHHTTCC
T ss_pred ccccc-CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH-hCCCCHHHHHHhh
Confidence 65432 222344566788998766 678999999999999999999999997654322 2222211 1110 0000000
Q ss_pred C------------------ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 712 D------------------PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 712 d------------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
. +...... ...+.+|+.+||+.||++|||+.|+++|+||...
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~ 318 (367)
T 2fst_X 259 SESARNYIQSLTQMPKMNFANVFIGA----NPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318 (367)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHTTTC----CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred hHHHHHHHhccCCCCCCCHHHHCCCC----CHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhc
Confidence 0 0001112 2348899999999999999999999999999754
No 179
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.7e-39 Score=370.20 Aligned_cols=253 Identities=24% Similarity=0.367 Sum_probs=204.1
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.++|...+.||+|+||.||+|++.++..||||+++... ...++|.+|+++|++++|||||+++++|.+ . ..
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~-------~~ 336 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E-------PI 336 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-S-------SC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-c-------cc
Confidence 45677889999999999999999888889999998653 346789999999999999999999999865 2 26
Q ss_pred EEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 559 YLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
++|||||++|+|.+++.. .+..+++.++..|+.||++||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 337 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 413 (535)
T 2h8h_A 337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLI 413 (535)
T ss_dssp EEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTC
T ss_pred eEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceec
Confidence 999999999999999973 223589999999999999999999999 9999999999999999999999999999765
Q ss_pred hccC---CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCc
Q 004195 638 EARG---KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDP 713 (769)
Q Consensus 638 ~~~~---~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 713 (769)
.... .........|++||.+....++.++|||||||++|||+| |+.||.......+...+.... ..
T Consensus 414 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~----------~~ 483 (535)
T 2h8h_A 414 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY----------RM 483 (535)
T ss_dssp CCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTC----------CC
T ss_pred CCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----------CC
Confidence 3221 111122345788999888899999999999999999999 899997654333322221111 11
Q ss_pred cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 714 AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 714 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.....+++ .+.+++.+||+.||++|||+++|++.+...-.
T Consensus 484 ~~~~~~~~----~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 484 PCPPECPE----SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp CCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred CCCCCCCH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 11123343 48899999999999999999999999886543
No 180
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=5.8e-39 Score=343.46 Aligned_cols=260 Identities=16% Similarity=0.164 Sum_probs=203.5
Q ss_pred HHHHhcCCCCc-CccccCCceeEEEEEeC-CCcEEEEEEccccCC--CChhHHHHHHHHHhhcc-CCceeeEeeeeeccC
Q 004195 475 LKEATDCFDSS-SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--SSPHMYTYHIELISKLR-HSNLVSALGHCLDFS 549 (769)
Q Consensus 475 l~~~t~~f~~~-~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~ 549 (769)
.....+.|... +.||+|+||.||+|+.. +|+.||||++..... .....+.+|+.++.+++ ||||+++++++.+..
T Consensus 23 ~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~ 102 (327)
T 3lm5_A 23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS 102 (327)
T ss_dssp HHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred HHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC
Confidence 34445567666 88999999999999976 699999999976432 23567899999999995 699999999997643
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC---Cce
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE---NFH 625 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~ 625 (769)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.
T Consensus 103 -------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~ 172 (327)
T 3lm5_A 103 -------EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGD 172 (327)
T ss_dssp -------EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCC
T ss_pred -------eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCc
Confidence 489999999999999998632 34799999999999999999999999 9999999999999987 789
Q ss_pred eeecCCCCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHh-hhhhcccc
Q 004195 626 VKINSYNLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKD-LLQVNIGT 703 (769)
Q Consensus 626 ~kl~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~-~~~~~~~~ 703 (769)
+||+|||+++....... ....++..|++||.+....++.++|||||||++|||+||+.||.......... +......
T Consensus 173 ~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~- 251 (327)
T 3lm5_A 173 IKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVD- 251 (327)
T ss_dssp EEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC-
T ss_pred EEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccc-
Confidence 99999999976543322 22334556788999988899999999999999999999999997654332222 1111110
Q ss_pred ccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 704 DEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 704 ~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..+.....++ ..+.+++.+||+.||++|||++|+++|+|+..
T Consensus 252 -------~~~~~~~~~~----~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~ 293 (327)
T 3lm5_A 252 -------YSEETFSSVS----QLATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293 (327)
T ss_dssp -------CCTTTTTTSC----HHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCC
T ss_pred -------cCchhhcccC----HHHHHHHHHHcCCChhhCcCHHHHhCCHhhcc
Confidence 0111112233 34889999999999999999999999999864
No 181
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=5.1e-39 Score=357.08 Aligned_cols=271 Identities=16% Similarity=0.207 Sum_probs=198.0
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++|||||++++++...... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~--~~ 102 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLL--KF 102 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTT--TC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCC--cC
Confidence 457889999999999999999976 6899999999754222 235788999999999999999999999764321 12
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...|+||||++ |+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 103 ~~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~ 177 (432)
T 3n9x_A 103 DELYIVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLAR 177 (432)
T ss_dssp CCEEEEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred CeEEEEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence 45899999996 69999998654 699999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccC------------------------CcceeecCCCcchhhh-ccCCCCCCCCeeehhHHHHHHHhCCCC------
Q 004195 636 LAEARG------------------------KGSAEVSSPAKKTSVL-ARTEQDDKSDVYDIGIILIEIIVGRPI------ 684 (769)
Q Consensus 636 ~~~~~~------------------------~~~~~~~~~~~~pe~~-~~~~~~~ksDVwS~Gvil~elltG~~p------ 684 (769)
...... .....++..|++||.+ ....++.++||||+||++|||++|..|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~ 257 (432)
T 3n9x_A 178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPT 257 (432)
T ss_dssp EC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGG
T ss_pred cccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccc
Confidence 653321 1223345567889975 456799999999999999999985433
Q ss_pred -----CCCch------------------hHHHHhhhhhccccc--ccccccc-----------CccccC---CCCHHHHH
Q 004195 685 -----TSENV------------------VVLVKDLLQVNIGTD--EARKSIV-----------DPAVMN---ECSDESLK 725 (769)
Q Consensus 685 -----~~~~~------------------~~~~~~~~~~~~~~~--~~~~~~~-----------d~~~~~---~~~~~~~~ 725 (769)
|.+.. ......+... .+.+ +.+..+. ...... ...+....
T Consensus 258 ~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 336 (432)
T 3n9x_A 258 NRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNI-IGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISD 336 (432)
T ss_dssp GCCCSCCCSCSCC----------CHHHHHHHHHHHHHH-HCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCH
T ss_pred cccccCCCccccccCcccccccccccchHHHHHHHHHh-cCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCH
Confidence 32211 0111111110 0100 0000000 000000 00011234
Q ss_pred HHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 726 RMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 726 ~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+.+|+.+||+.||++|||++|+++|+|+...
T Consensus 337 ~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 368 (432)
T 3n9x_A 337 DGINLLESMLKFNPNKRITIDQALDHPYLKDV 368 (432)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTT
T ss_pred HHHHHHHHHhcCCcccCCCHHHHhcChhhhhc
Confidence 48899999999999999999999999999764
No 182
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.6e-39 Score=356.76 Aligned_cols=268 Identities=18% Similarity=0.281 Sum_probs=197.9
Q ss_pred CCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
.|...+.||+|+||.||+|+.. +|+.||||++.... +...+|++++++++|||||+++++|...... ......+
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~-~~~~~~~ 129 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEK-KDEVYLN 129 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETT-TTEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCC-CcceeEE
Confidence 5777899999999999999986 69999999986432 2345799999999999999999998653321 1234567
Q ss_pred EEEeccCCCchhhhhc---CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC-ceeeecCCCCch
Q 004195 560 LIFEYAPNETLRSFIS---GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN-FHVKINSYNLPL 635 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~-~~~kl~DFGla~ 635 (769)
+||||+++ ++.+.+. .....+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999985 6666554 2334799999999999999999999998 99999999999999955 678999999997
Q ss_pred hhhccC-CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchh-HHHHhhhhhcc-cccccc----
Q 004195 636 LAEARG-KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVV-VLVKDLLQVNI-GTDEAR---- 707 (769)
Q Consensus 636 ~~~~~~-~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~-~~~~~~~~~~~-~~~~~~---- 707 (769)
...... .....++..|++||.+.+. .++.++|||||||++|||++|++||..... +.+..++.... ...+.+
T Consensus 206 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~ 285 (420)
T 1j1b_A 206 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 285 (420)
T ss_dssp ECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHC
T ss_pred hcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence 653322 2233445667889987654 789999999999999999999999976542 22223222110 000000
Q ss_pred ---ccccCccccCC-----CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 708 ---KSIVDPAVMNE-----CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 708 ---~~~~d~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+...|.+... +++....++.+|+.+||+.||++|||+.|+++|+||...
T Consensus 286 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~ 343 (420)
T 1j1b_A 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 343 (420)
T ss_dssp SCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred hhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence 00001111000 111223458999999999999999999999999999654
No 183
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-39 Score=351.73 Aligned_cols=253 Identities=22% Similarity=0.341 Sum_probs=191.2
Q ss_pred CCCCcCccccCCceeEEEEEeC--CC--cEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 481 CFDSSSFMCDASHGQIYKGKLT--DG--TLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~--~g--~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.|...+.||+|+||.||+|+.. ++ ..||||.++.... ...+.+.+|+.++++++|||||+++++|.+.+
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~------ 163 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE------ 163 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCS------
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC------
Confidence 3556789999999999999864 22 4689999875432 22467899999999999999999999986432
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
+..++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 164 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 240 (373)
T 3c1x_A 164 GSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 240 (373)
T ss_dssp SCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred CCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccc
Confidence 236899999999999999987666799999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCC------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccc
Q 004195 636 LAEARGK------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARK 708 (769)
Q Consensus 636 ~~~~~~~------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (769)
....... .....+..|++||.+.+..++.++|||||||++|||+| |.+||...........+....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~------- 313 (373)
T 3c1x_A 241 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR------- 313 (373)
T ss_dssp -----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTC-------
T ss_pred cccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCC-------
Confidence 5533221 11122335788999988899999999999999999999 677776533221111111100
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+.....+++ .+.+++.+||+.||++|||+.|+++++....
T Consensus 314 ---~~~~p~~~~~----~l~~li~~cl~~dp~~RPs~~ell~~L~~i~ 354 (373)
T 3c1x_A 314 ---RLLQPEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRISAIF 354 (373)
T ss_dssp ---CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CCCCCCCCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0111122333 4889999999999999999999999998664
No 184
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.6e-39 Score=338.95 Aligned_cols=255 Identities=13% Similarity=0.171 Sum_probs=196.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
.++|...+.||+|+||.||+|+.. +++.||||++....... .+.+.+|+.++++++||||+++++++.+.+
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~----- 107 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG----- 107 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC-----
Confidence 467889999999999999999976 78999999997653333 357889999999999999999999998643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 108 --~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~ 181 (309)
T 2h34_A 108 --QLYVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIA 181 (309)
T ss_dssp --EEEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-
T ss_pred --eEEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccC
Confidence 4899999999999999998543 689999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhccCC---cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 635 LLAEARGK---GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 635 ~~~~~~~~---~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
........ ....++..|.+||.+.+..++.++||||||+++|||+||+.||...........+.......
T Consensus 182 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------- 254 (309)
T 2h34_A 182 SATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRP------- 254 (309)
T ss_dssp ---------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCG-------
T ss_pred ccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCc-------
Confidence 65543221 12234456788999888889999999999999999999999998765443333222111100
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCC-CHHHHHHHhHhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRP-SVEDTLWNLQFAT 756 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~l~~~~ 756 (769)
......+++ .+.+++.+||+.||++|| +++++++.++.+.
T Consensus 255 -~~~~~~~~~----~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l 295 (309)
T 2h34_A 255 -STVRPGIPV----AFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL 295 (309)
T ss_dssp -GGTSTTCCT----HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred -cccCCCCCH----HHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence 011122333 388999999999999999 9999999887653
No 185
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.9e-39 Score=338.58 Aligned_cols=256 Identities=16% Similarity=0.239 Sum_probs=187.1
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC-h-hHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS-P-HMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~-~-~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|+..+.||+|+||.||+|+.. +|+.||||+++...... . +.+.++...++.++||||+++++++.+...
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~----- 80 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGD----- 80 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSS-----
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCC-----
Confidence 357888999999999999999975 79999999997542211 1 233444555788899999999999986443
Q ss_pred ceEEEEEeccCCCchhhhhc---CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 556 SIIYLIFEYAPNETLRSFIS---GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
.++||||++ |+|.+++. .....+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||
T Consensus 81 --~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T 3fme_A 81 --VWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFG 155 (290)
T ss_dssp --EEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC-
T ss_pred --EEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecC
Confidence 899999997 58887775 2344799999999999999999999984 289999999999999999999999999
Q ss_pred CchhhhccCC-cceeecCCCcchhhh----ccCCCCCCCCeeehhHHHHHHHhCCCCCCCch--hHHHHhhhhhcccccc
Q 004195 633 LPLLAEARGK-GSAEVSSPAKKTSVL----ARTEQDDKSDVYDIGIILIEIIVGRPITSENV--VVLVKDLLQVNIGTDE 705 (769)
Q Consensus 633 la~~~~~~~~-~~~~~~~~~~~pe~~----~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~--~~~~~~~~~~~~~~~~ 705 (769)
+++....... ....++..|++||.+ ....++.++|||||||++|||+||+.||.... ...........
T Consensus 156 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----- 230 (290)
T 3fme_A 156 ISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP----- 230 (290)
T ss_dssp --------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSC-----
T ss_pred CcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccC-----
Confidence 9976543322 222455667889985 45678999999999999999999999997422 22222211110
Q ss_pred ccccccCccc-cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 706 ARKSIVDPAV-MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 706 ~~~~~~d~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
.+.. ...+++ ++.+++.+||+.||++|||+.|+++|+||.....
T Consensus 231 ------~~~~~~~~~~~----~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~~ 275 (290)
T 3fme_A 231 ------SPQLPADKFSA----EFVDFTSQCLKKNSKERPTYPELMQHPFFTLHES 275 (290)
T ss_dssp ------CCCCCTTTSCH----HHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHH
T ss_pred ------CCCcccccCCH----HHHHHHHHHhhcChhhCcCHHHHHhCcccccCcc
Confidence 0111 112333 4889999999999999999999999999986543
No 186
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4.3e-39 Score=342.20 Aligned_cols=253 Identities=18% Similarity=0.263 Sum_probs=201.5
Q ss_pred cCCCCcCccccCCceeEEEEEe------CCCcEEEEEEccccCC-CChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL------TDGTLVAIRSLKMSKK-SSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~ 551 (769)
++|...+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|+++++++ +||||++++++|.+.+.
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~- 101 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP- 101 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS-
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC-
Confidence 5678889999999999999984 2578999999975432 2246789999999999 89999999999976443
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCC-----------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcc
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPG-----------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLK 614 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~-----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlK 614 (769)
.++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+|||||
T Consensus 102 ------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlk 172 (313)
T 1t46_A 102 ------TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 172 (313)
T ss_dssp ------CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred ------cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCc
Confidence 799999999999999997432 2489999999999999999999999 99999999
Q ss_pred ccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCch
Q 004195 615 ITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENV 689 (769)
Q Consensus 615 p~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~ 689 (769)
|+||+++.++.+||+|||+++....... ....++..|++||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 173 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 252 (313)
T 1t46_A 173 ARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP 252 (313)
T ss_dssp GGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred cceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence 9999999999999999999976543322 12223345888998888899999999999999999999 999987543
Q ss_pred hH-HHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 690 VV-LVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 690 ~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.. .....+... ..+.....+++ .+.+++.+||+.||++|||+.|+++++....
T Consensus 253 ~~~~~~~~~~~~----------~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 253 VDSKFYKMIKEG----------FRMLSPEHAPA----EMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp SSHHHHHHHHHT----------CCCCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred chhHHHHHhccC----------CCCCCcccCCH----HHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 21 121211111 11111122333 4889999999999999999999999998654
No 187
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4.9e-39 Score=336.66 Aligned_cols=258 Identities=22% Similarity=0.348 Sum_probs=203.5
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC----
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD---- 552 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~---- 552 (769)
..++|+..+.||+|+||.||+|+.. +|+.||||+++.. .+.+.+|++++++++||||+++++++.....+.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN----NEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECC----SGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccc----cHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3456888999999999999999986 7999999999743 256889999999999999999999886422110
Q ss_pred -----CCcceEEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCcee
Q 004195 553 -----PSISIIYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHV 626 (769)
Q Consensus 553 -----~~~~~~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ 626 (769)
......++||||+++|+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+||++++++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCE
Confidence 123457999999999999999973 234689999999999999999999999 99999999999999999999
Q ss_pred eecCCCCchhhhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccc
Q 004195 627 KINSYNLPLLAEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDE 705 (769)
Q Consensus 627 kl~DFGla~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (769)
||+|||++....... .....++..|.+||...+..++.++|||||||++|||+||..|+..... .....
T Consensus 162 kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-~~~~~--------- 231 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK-FFTDL--------- 231 (284)
T ss_dssp EECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH-HHHHH---------
T ss_pred EECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH-HHHHh---------
Confidence 999999986654332 2223345677889999888899999999999999999999988743211 11110
Q ss_pred ccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhccc
Q 004195 706 ARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGL 761 (769)
Q Consensus 706 ~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~ 761 (769)
.+..+...+++ .+.+++.+||+.||++|||+.|++++++.....++.
T Consensus 232 -----~~~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 232 -----RDGIISDIFDK----KEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp -----HTTCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred -----hcccccccCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 01111122333 378999999999999999999999999988665443
No 188
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=345.71 Aligned_cols=269 Identities=21% Similarity=0.332 Sum_probs=204.5
Q ss_pred cCHHHHHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeec
Q 004195 470 FTLDELKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLD 547 (769)
Q Consensus 470 ~~~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~ 547 (769)
+++.++....++|...+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 344455566788999999999999999999975 79999999997543 3457899999999999 79999999999976
Q ss_pred cCCCCCCcceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCcee
Q 004195 548 FSLDDPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHV 626 (769)
Q Consensus 548 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ 626 (769)
.... ......++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 93 ~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 93 KNPP-GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp CC---CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCE
T ss_pred ccCc-cccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCE
Confidence 4321 1134689999999999999999743 34689999999999999999999999 99999999999999999999
Q ss_pred eecCCCCchhhhccC--CcceeecCCCcchhhhc-----cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhh
Q 004195 627 KINSYNLPLLAEARG--KGSAEVSSPAKKTSVLA-----RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQV 699 (769)
Q Consensus 627 kl~DFGla~~~~~~~--~~~~~~~~~~~~pe~~~-----~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~ 699 (769)
||+|||++....... .....++..|.+||.+. ...++.++|||||||++|||+||+.||...........+..
T Consensus 169 kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 248 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR 248 (326)
T ss_dssp EECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred EEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc
Confidence 999999986553321 12223455678898875 46789999999999999999999999976443222111111
Q ss_pred ccccccccccccCccc-cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 700 NIGTDEARKSIVDPAV-MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
. ..+.. ...+++ .+.+++.+||+.||++||+++|+++|+|+...
T Consensus 249 ~----------~~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~ 293 (326)
T 2x7f_A 249 N----------PAPRLKSKKWSK----KFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ 293 (326)
T ss_dssp S----------CCCCCSCSCSCH----HHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred C----------ccccCCccccCH----HHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence 0 00111 122333 48899999999999999999999999998643
No 189
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-39 Score=352.10 Aligned_cols=254 Identities=18% Similarity=0.239 Sum_probs=198.9
Q ss_pred cCCCCcCccccCCceeEEEEEe----CCCcEEEEEEccccC----CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL----TDGTLVAIRSLKMSK----KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSL 550 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~----~~g~~vAvK~~~~~~----~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~ 550 (769)
++|...+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+++++++ +||||+++++++.+..
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~- 132 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET- 132 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT-
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc-
Confidence 5688899999999999999997 368999999997532 23446678899999999 5999999999987643
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecC
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINS 630 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~D 630 (769)
..++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 133 ------~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~D 202 (355)
T 1vzo_A 133 ------KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTD 202 (355)
T ss_dssp ------EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESC
T ss_pred ------eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEee
Confidence 4899999999999999997543 689999999999999999999998 999999999999999999999999
Q ss_pred CCCchhhhccC---CcceeecCCCcchhhhcc--CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccccc
Q 004195 631 YNLPLLAEARG---KGSAEVSSPAKKTSVLAR--TEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTD 704 (769)
Q Consensus 631 FGla~~~~~~~---~~~~~~~~~~~~pe~~~~--~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~ 704 (769)
||+++...... .....++..|++||.+.+ ..++.++|||||||++|||+||+.||...... ....+......
T Consensus 203 fG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~-- 280 (355)
T 1vzo_A 203 FGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK-- 280 (355)
T ss_dssp SSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--
T ss_pred CCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc--
Confidence 99986542221 122335567888998865 34789999999999999999999998643211 11111111000
Q ss_pred cccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCC-----CHHHHHHHhHhhh
Q 004195 705 EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP-----SVEDTLWNLQFAT 756 (769)
Q Consensus 705 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~l~~~~ 756 (769)
..+.....++ ..+.+++.+||+.||++|| +++|+++|+||..
T Consensus 281 ------~~~~~~~~~~----~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~ 327 (355)
T 1vzo_A 281 ------SEPPYPQEMS----ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327 (355)
T ss_dssp ------CCCCCCTTSC----HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred ------cCCCCCcccC----HHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence 0112222333 3488999999999999999 9999999999975
No 190
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=336.07 Aligned_cols=257 Identities=16% Similarity=0.247 Sum_probs=200.6
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC----CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK----KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
.++|...+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---- 79 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEE---- 79 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-----
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC----
Confidence 468999999999999999999975 68999999997542 233567999999999999999999999986422
Q ss_pred CcceEEEEEeccCCCchhhhhc-CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFIS-GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
....++||||++++ |.+++. .....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 80 -~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg 154 (305)
T 2wtk_C 80 -KQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALG 154 (305)
T ss_dssp ---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred -CCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccc
Confidence 23489999999876 666665 3344799999999999999999999999 99999999999999999999999999
Q ss_pred CchhhhccCC----cceeecCCCcchhhhccCC--CCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccc
Q 004195 633 LPLLAEARGK----GSAEVSSPAKKTSVLARTE--QDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEA 706 (769)
Q Consensus 633 la~~~~~~~~----~~~~~~~~~~~pe~~~~~~--~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (769)
++........ ....++..|.+||...+.. ++.++|||||||++|||++|+.||...........+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~------ 228 (305)
T 2wtk_C 155 VAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG------ 228 (305)
T ss_dssp TCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC------
T ss_pred cccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC------
Confidence 9865432211 1223445677888876543 377999999999999999999999865433222211110
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
...+...++++ +.+++.+||+.||++|||++|+++|+|+.....
T Consensus 229 -----~~~~~~~~~~~----l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 229 -----SYAIPGDCGPP----LSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp -----CCCCCSSSCHH----HHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred -----CCCCCCccCHH----HHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence 01122234443 889999999999999999999999999976543
No 191
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=9.8e-39 Score=341.77 Aligned_cols=254 Identities=23% Similarity=0.383 Sum_probs=200.4
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcE--EEEEEccccC-CCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTL--VAIRSLKMSK-KSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~--vAvK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|...+.||+|+||.||+|+.. +|.. ||||.++... ....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~----- 99 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG----- 99 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT-----
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC-----
Confidence 46888899999999999999965 5664 4999987532 33456799999999999 8999999999997643
Q ss_pred cceEEEEEeccCCCchhhhhcCCC---------------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccccee
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPG---------------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVL 619 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NIL 619 (769)
..++||||+++|+|.+++.... ..+++..++.++.|+++||+|||+. +|+||||||+||+
T Consensus 100 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl 174 (327)
T 1fvr_A 100 --YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNIL 174 (327)
T ss_dssp --EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred --ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEE
Confidence 4899999999999999997543 3689999999999999999999999 9999999999999
Q ss_pred eCCCceeeecCCCCchhhhccCCcc-eeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhh
Q 004195 620 LDENFHVKINSYNLPLLAEARGKGS-AEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLL 697 (769)
Q Consensus 620 ld~~~~~kl~DFGla~~~~~~~~~~-~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~ 697 (769)
++.++.+||+|||+++......... ...+..|.+||.+....++.++|||||||++|||+| |+.||...........+
T Consensus 175 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~ 254 (327)
T 1fvr_A 175 VGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 254 (327)
T ss_dssp ECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHG
T ss_pred EcCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHh
Confidence 9999999999999986443322222 223446788999888888999999999999999998 99999765443322211
Q ss_pred hhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 698 QVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 698 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
... ..+.....+++ .+.+++.+||+.||++|||++|+++++....+
T Consensus 255 ~~~----------~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 255 PQG----------YRLEKPLNCDD----EVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp GGT----------CCCCCCTTBCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcC----------CCCCCCCCCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 110 01111122333 48899999999999999999999999987654
No 192
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=8.3e-39 Score=334.16 Aligned_cols=251 Identities=24% Similarity=0.360 Sum_probs=202.3
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
++|...+.||+|+||.||+|+..++..||||.++... ...+.+.+|++++++++||||+++++++.+.. .+
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--------~~ 83 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP--------IY 83 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--------CE
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcCCC--------cE
Confidence 5678889999999999999998888899999997543 34678999999999999999999999986422 68
Q ss_pred EEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhh
Q 004195 560 LIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAE 638 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~ 638 (769)
+||||+++++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++....
T Consensus 84 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 160 (279)
T 1qpc_A 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 160 (279)
T ss_dssp EEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCccccccc
Confidence 9999999999999997432 2589999999999999999999999 99999999999999999999999999997654
Q ss_pred ccCC---cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 639 ARGK---GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 639 ~~~~---~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
.... ....++..|.+||......++.++|||||||++|||+| |+.||...........+... ..+.
T Consensus 161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~----------~~~~ 230 (279)
T 1qpc_A 161 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG----------YRMV 230 (279)
T ss_dssp SSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT----------CCCC
T ss_pred CcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc----------cCCC
Confidence 3221 11223345788999888889999999999999999999 89998765433322211111 0111
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
....+++ .+.+++.+|++.||++|||++++++.+....
T Consensus 231 ~~~~~~~----~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 231 RPDNCPE----ELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp CCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CcccccH----HHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 1123333 4889999999999999999999999887553
No 193
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=6.6e-39 Score=373.97 Aligned_cols=252 Identities=17% Similarity=0.217 Sum_probs=206.8
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEcccc---CCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMS---KKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~ 553 (769)
.++|+..+.||+|+||.||+|+.. +++.||||+++.. .....+.+.+|..++..+ +||+|+++++++.+.+
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~---- 415 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD---- 415 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS----
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC----
Confidence 467999999999999999999976 6899999999753 234456788899999988 7999999999987633
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..|+||||+++|+|.+++...+ .+++..+..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 416 ---~~~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGl 488 (674)
T 3pfq_A 416 ---RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGM 488 (674)
T ss_dssp ---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTT
T ss_pred ---EEEEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecce
Confidence 4899999999999999998544 699999999999999999999999 999999999999999999999999999
Q ss_pred chhhhc--cCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccccccc
Q 004195 634 PLLAEA--RGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIV 711 (769)
Q Consensus 634 a~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (769)
++.... .......++..|++||.+.+..|+.++|||||||++|||+||++||...........+.. .
T Consensus 489 a~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~---~-------- 557 (674)
T 3pfq_A 489 CKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME---H-------- 557 (674)
T ss_dssp CEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHS---S--------
T ss_pred eeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHh---C--------
Confidence 975322 222334456778899999889999999999999999999999999987554332221111 0
Q ss_pred CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCH-----HHHHHHhHhhh
Q 004195 712 DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSV-----EDTLWNLQFAT 756 (769)
Q Consensus 712 d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~l~~~~ 756 (769)
...+....+ .++.+|+.+||+.||++||++ +||++|+||..
T Consensus 558 ~~~~p~~~s----~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~ 603 (674)
T 3pfq_A 558 NVAYPKSMS----KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 603 (674)
T ss_dssp CCCCCTTSC----HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSS
T ss_pred CCCCCccCC----HHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccC
Confidence 011112233 348999999999999999998 99999999964
No 194
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.5e-39 Score=342.02 Aligned_cols=263 Identities=20% Similarity=0.289 Sum_probs=198.8
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCC------
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSL------ 550 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~------ 550 (769)
..++|+..+.||+|+||.||+|+.. +|+.||||++... ....+.+.+|++++++++||||+++++++.+...
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 3567889999999999999999975 7999999999643 2234678899999999999999999999865321
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecC
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINS 630 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~D 630 (769)
........++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEee
Confidence 00124568999999999999999986555788999999999999999999999 999999999999999999999999
Q ss_pred CCCchhhhcc----------------CCcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCch-hHH
Q 004195 631 YNLPLLAEAR----------------GKGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENV-VVL 692 (769)
Q Consensus 631 FGla~~~~~~----------------~~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~-~~~ 692 (769)
||+++..... ......++..|.+||.+.+. .++.++|||||||++|||++ |+.... ...
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~ 236 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN 236 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH
Confidence 9998654321 11222345567889987654 68999999999999999998 443221 111
Q ss_pred HHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 693 VKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
....+.. . .......++......+.+++.+||+.||++|||+.|+++|+|+....
T Consensus 237 ~~~~~~~---~--------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (303)
T 1zy4_A 237 ILKKLRS---V--------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKH 291 (303)
T ss_dssp HHHHHHS---T--------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCCC
T ss_pred HHHhccc---c--------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCCC
Confidence 1111110 0 01111122233334588999999999999999999999999996543
No 195
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.6e-39 Score=353.81 Aligned_cols=270 Identities=16% Similarity=0.249 Sum_probs=197.1
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
.+|...+.||+|+||.||+|+...+..||+|++.... ....+|+++++.++|||||+++++|..... .......+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~-~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGD-KKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESS-SSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCC-CCCceEEE
Confidence 3578889999999999999998776679999886432 223479999999999999999999976442 12244578
Q ss_pred EEEeccCCCchhhhhc--CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC-CCceeeecCCCCchh
Q 004195 560 LIFEYAPNETLRSFIS--GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD-ENFHVKINSYNLPLL 636 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~kl~DFGla~~ 636 (769)
+||||++++.+..... .....+++..+..++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 9999998654443332 2234789999999999999999999999 999999999999999 799999999999976
Q ss_pred hhccCC-cceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccc-cccccc----
Q 004195 637 AEARGK-GSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIG-TDEARK---- 708 (769)
Q Consensus 637 ~~~~~~-~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~-~~~~~~---- 708 (769)
...... ....++..|++||.+.+. .++.++|||||||++|||++|++||.+.... ....++..... ..+.+.
T Consensus 192 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~ 271 (394)
T 4e7w_A 192 LIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP 271 (394)
T ss_dssp CCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCG
T ss_pred ccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh
Confidence 533322 223345567889987654 5899999999999999999999999765432 22222221100 000000
Q ss_pred ---cccCcccc-----CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 709 ---SIVDPAVM-----NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 709 ---~~~d~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...-+... ..+++....++.+++.+||+.||++|||+.|+++|+||..-
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 328 (394)
T 4e7w_A 272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328 (394)
T ss_dssp GGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred hhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence 00000000 00111123458999999999999999999999999999754
No 196
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.9e-39 Score=340.32 Aligned_cols=268 Identities=16% Similarity=0.285 Sum_probs=196.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCC-------
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLD------- 551 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~------- 551 (769)
++|...+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++||||+++++++......
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 56888999999999999999976 5999999999765444456789999999999999999999998543210
Q ss_pred CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC-CCceeeecC
Q 004195 552 DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD-ENFHVKINS 630 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~~kl~D 630 (769)
.......++||||++ |+|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++ +++.+||+|
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECC
T ss_pred ccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEcc
Confidence 012356899999997 6999999753 589999999999999999999999 999999999999997 567999999
Q ss_pred CCCchhhhccC-----CcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc-
Q 004195 631 YNLPLLAEARG-----KGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT- 703 (769)
Q Consensus 631 FGla~~~~~~~-----~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~- 703 (769)
||+++...... .....++..|++||.... ..++.++|||||||++|||+||+.||...........+......
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 244 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVV 244 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCC
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 99997653221 112223455778887755 67899999999999999999999999765432221111111100
Q ss_pred -ccccccc------------cCc-----cccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 704 -DEARKSI------------VDP-----AVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 704 -~~~~~~~------------~d~-----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+...++ ..+ .....++ .++.+++.+||+.||++|||++|+++|+|+...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 312 (320)
T 2i6l_A 245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGIS----REAVDFLEQILTFSPMDRLTAEEALSHPYMSIY 312 (320)
T ss_dssp CHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCC----HHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTT
T ss_pred chhhhhhhhhcCcccccccccCCCCChhHhcchhh----HHHHHHHHHHcCCCccccCCHHHHhCCcccccc
Confidence 0000000 000 0111223 448999999999999999999999999999754
No 197
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=3.2e-39 Score=337.16 Aligned_cols=252 Identities=19% Similarity=0.305 Sum_probs=196.3
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.++|+..+.||+|+||.||+|+.. |+.||||+++.. ...+.+.+|++++++++||||+++++++.+.. +..
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------~~~ 90 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK------GGL 90 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--------CC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC------Cce
Confidence 356888999999999999999875 889999999753 24567999999999999999999999976532 237
Q ss_pred EEEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhh
Q 004195 559 YLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~ 167 (278)
T 1byg_A 91 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 167 (278)
T ss_dssp EEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC----
T ss_pred EEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccc
Confidence 99999999999999997432 2378999999999999999999999 9999999999999999999999999998755
Q ss_pred hccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 638 EARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 638 ~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
..... ....+..|.+||...+..++.++||||||+++|||+| |++||...........+... ..+...
T Consensus 168 ~~~~~-~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~----------~~~~~~ 236 (278)
T 1byg_A 168 SSTQD-TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG----------YKMDAP 236 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTT----------CCCCCC
T ss_pred ccccc-CCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC----------CCCCCc
Confidence 43222 2233456888999888889999999999999999998 99998765433222211110 111222
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+++ .+.+++.+||+.||++|||+.|+++.+.....
T Consensus 237 ~~~~~----~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 237 DGCPP----AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp TTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccCCH----HHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 23344 48899999999999999999999999987654
No 198
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.1e-39 Score=344.85 Aligned_cols=259 Identities=19% Similarity=0.245 Sum_probs=204.2
Q ss_pred HHHHHHhcCCCCcCccccCCceeEEEEEeC------CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeee
Q 004195 473 DELKEATDCFDSSSFMCDASHGQIYKGKLT------DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHC 545 (769)
Q Consensus 473 ~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~ 545 (769)
++.....++|...+.||+|+||.||+|+.. +++.||||.+..... .....+.+|++++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 334445678999999999999999999854 377899999975432 1234688999999999999999999999
Q ss_pred eccCCCCCCcceEEEEEeccCCCchhhhhcCC---------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccc
Q 004195 546 LDFSLDDPSISIIYLIFEYAPNETLRSFISGP---------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKIT 616 (769)
Q Consensus 546 ~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~ 616 (769)
.+... .++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+
T Consensus 98 ~~~~~-------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~ 167 (322)
T 1p4o_A 98 SQGQP-------TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAAR 167 (322)
T ss_dssp CSSSS-------CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGG
T ss_pred ccCCc-------cEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccc
Confidence 76443 79999999999999998631 13579999999999999999999999 9999999999
Q ss_pred ceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhH
Q 004195 617 DVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVV 691 (769)
Q Consensus 617 NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~ 691 (769)
||+++.++.+||+|||+++....... .....+..|++||.+.+..++.++|||||||++|||+| |+.||......
T Consensus 168 NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 247 (322)
T 1p4o_A 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 247 (322)
T ss_dssp GEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH
T ss_pred eEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH
Confidence 99999999999999999975533221 12223445788999888889999999999999999999 88888765433
Q ss_pred HHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 692 LVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
.....+.... .+.....+++ .+.+++.+||+.||++|||+.|+++++...
T Consensus 248 ~~~~~~~~~~----------~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~e~l~~L~~~ 297 (322)
T 1p4o_A 248 QVLRFVMEGG----------LLDKPDNCPD----MLFELMRMCWQYNPKMRPSFLEIISSIKEE 297 (322)
T ss_dssp HHHHHHHTTC----------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred HHHHHHHcCC----------cCCCCCCCCH----HHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence 3322221100 0111123333 488999999999999999999999998754
No 199
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.8e-38 Score=345.72 Aligned_cols=270 Identities=16% Similarity=0.242 Sum_probs=199.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++....... .+.+.+|+.++++++||||+++++++...+... ..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-~~ 119 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR-NF 119 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSST-TC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcc-cc
Confidence 356888899999999999999975 69999999997543222 357889999999999999999999997644311 11
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...++||||++ ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred eeEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 23599999997 689888853 489999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhcccccccc-ccc--
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGTDEAR-KSI-- 710 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~~~~~-~~~-- 710 (769)
....... ...++..|++||.+.+ ..++.++|||||||++|||+||+.||....... ...+........... ..+
T Consensus 193 ~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 271 (371)
T 4exu_A 193 HADAEMT-GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND 271 (371)
T ss_dssp --------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSC
T ss_pred ccccCcC-CcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhh
Confidence 6543322 2234566788998876 678999999999999999999999997654322 222211110000000 000
Q ss_pred ---------cCccccC---CCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 711 ---------VDPAVMN---ECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 711 ---------~d~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
....... ...+.....+.+++.+||+.||++|||++|+++|+||...
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 330 (371)
T 4exu_A 272 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 330 (371)
T ss_dssp HHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred hhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence 0000000 0011123458999999999999999999999999999754
No 200
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=7.7e-39 Score=337.76 Aligned_cols=259 Identities=13% Similarity=0.239 Sum_probs=203.5
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC---------ChhHHHHHHHHHhhcc-CCceeeEeeeee
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS---------SPHMYTYHIELISKLR-HSNLVSALGHCL 546 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~---------~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~ 546 (769)
..++|...+.||+|+||.||+|+.. +|+.||||+++..... ..+.+.+|++++++++ ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3467889999999999999999976 6899999999754321 1245788999999996 999999999997
Q ss_pred ccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCcee
Q 004195 547 DFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHV 626 (769)
Q Consensus 547 ~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ 626 (769)
+.. ..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 95 ~~~-------~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~ 163 (298)
T 1phk_A 95 TNT-------FFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNI 163 (298)
T ss_dssp CSS-------EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred cCC-------eEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcE
Confidence 633 4899999999999999997543 689999999999999999999999 99999999999999999999
Q ss_pred eecCCCCchhhhccCC-cceeecCCCcchhhhc------cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhh
Q 004195 627 KINSYNLPLLAEARGK-GSAEVSSPAKKTSVLA------RTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQV 699 (769)
Q Consensus 627 kl~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~------~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~ 699 (769)
||+|||++........ ....++..|.+||.+. ...++.++||||||+++|||++|+.||...........+..
T Consensus 164 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~ 243 (298)
T 1phk_A 164 KLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS 243 (298)
T ss_dssp EECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred EEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhc
Confidence 9999999865543222 2223445677888764 45688999999999999999999999876543322221111
Q ss_pred ccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
... .. .......++ ..+.+++.+||+.||++|||+.|+++|+||....
T Consensus 244 ~~~------~~-~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 244 GNY------QF-GSPEWDDYS----DTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291 (298)
T ss_dssp TCC------CC-CTTTGGGSC----HHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred CCc------cc-CcccccccC----HHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence 100 00 001111233 3488999999999999999999999999997543
No 201
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=8e-39 Score=342.47 Aligned_cols=256 Identities=18% Similarity=0.279 Sum_probs=199.0
Q ss_pred cCCCCcCccccCCceeEEEEEe------CCCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL------TDGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
++|...+.||+|+||.||+|+. .+++.||||++..... ....++.+|+.++++++||||+++++++.+...
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-- 107 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP-- 107 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS--
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC--
Confidence 5688899999999999999984 2577999999974322 224578899999999999999999999986443
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCC------CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC---C
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPG------YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE---N 623 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~ 623 (769)
.++||||+++|+|.+++.... ..+++..++.++.|+++||+|||+. +|+||||||+||+++. +
T Consensus 108 -----~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~ 179 (327)
T 2yfx_A 108 -----RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPG 179 (327)
T ss_dssp -----CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTT
T ss_pred -----cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCc
Confidence 699999999999999997332 3589999999999999999999999 9999999999999984 4
Q ss_pred ceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhh
Q 004195 624 FHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQ 698 (769)
Q Consensus 624 ~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~ 698 (769)
..+||+|||+++....... ....++..|++||.+....++.++|||||||++|||+| |+.||...........+.
T Consensus 180 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~ 259 (327)
T 2yfx_A 180 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT 259 (327)
T ss_dssp CCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred ceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHh
Confidence 5699999999875533221 11222345788999888899999999999999999999 999987654433322221
Q ss_pred hccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 699 VNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 699 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
... .+.....+++ .+.+++.+||+.||++||++.|+++++++....+
T Consensus 260 ~~~----------~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 260 SGG----------RMDPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp TTC----------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred cCC----------CCCCCCCCCH----HHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 110 0111123333 4889999999999999999999999999876544
No 202
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.3e-38 Score=337.40 Aligned_cols=275 Identities=17% Similarity=0.286 Sum_probs=206.2
Q ss_pred HHhcCCCCcCccccCCceeEEEEEe--CCCcEEEEEEccccCC--CChhHHHHHHHHHhhc---cCCceeeEeeeeeccC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKL--TDGTLVAIRSLKMSKK--SSPHMYTYHIELISKL---RHSNLVSALGHCLDFS 549 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~--~~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l---~H~nIv~l~~~~~~~~ 549 (769)
++.++|...+.||+|+||.||+|+. .+|+.||||+++.... .....+.+|+.+++++ +||||++++++|....
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 4567899999999999999999997 3688999999975432 2234678888888777 7999999999987322
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeee
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKI 628 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl 628 (769)
. ......++||||++ |+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 88 ~--~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 88 T--DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp C--SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred c--CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEE
Confidence 1 12356899999998 6999998743 33589999999999999999999999 9999999999999999999999
Q ss_pred cCCCCchhhhccC-CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhc-ccccc
Q 004195 629 NSYNLPLLAEARG-KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVN-IGTDE 705 (769)
Q Consensus 629 ~DFGla~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~-~~~~~ 705 (769)
+|||+++...... .....++..|++||...+..++.++|||||||++|||+||++||....... ...+.... .....
T Consensus 162 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 162 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241 (326)
T ss_dssp CSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGG
T ss_pred ecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcc
Confidence 9999997654322 222334566788999888889999999999999999999999997654322 22222110 00011
Q ss_pred ccccc-------cC---ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 706 ARKSI-------VD---PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 706 ~~~~~-------~d---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+... +. ..............+.+++.+||+.||++|||+.|+++|+|+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 303 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCcccccc
Confidence 11000 00 000011111223448899999999999999999999999999754
No 203
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.3e-39 Score=343.70 Aligned_cols=264 Identities=18% Similarity=0.300 Sum_probs=201.7
Q ss_pred cCCCCcCccccCCceeEEEEEe-----CCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKL-----TDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
++|...+.||+|+||.||+|++ .+|+.||||++........+.+.+|++++++++||||+++++++...+.
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 116 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR---- 116 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-------
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC----
Confidence 4577889999999999999984 3688999999986544445679999999999999999999999875332
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
...++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 117 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~ 192 (326)
T 2w1i_A 117 -RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLT 192 (326)
T ss_dssp --CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred -CceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcch
Confidence 237999999999999999986555799999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhccCC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccc---cc
Q 004195 635 LLAEARGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTD---EA 706 (769)
Q Consensus 635 ~~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~---~~ 706 (769)
+....... .....+..|++||...+..++.++|||||||++|||+||+.|+.......... ........ ..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 193 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM-IGNDKQGQMIVFH 271 (326)
T ss_dssp EECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHH-HCTTCCTHHHHHH
T ss_pred hhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHh-hccccchhhhHHH
Confidence 76543221 11122234788998888889999999999999999999998876432211110 00000000 00
Q ss_pred ccccc----CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 707 RKSIV----DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 707 ~~~~~----d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..+.+ .+.....++ .++.+++.+||+.||++|||+.|+++.+....
T Consensus 272 ~~~~~~~~~~~~~~~~~~----~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 272 LIELLKNNGRLPRPDGCP----DEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp HHHHHHTTCCCCCCTTCC----HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhhcCCCCCCCCccc----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 00001 111122333 44889999999999999999999999988664
No 204
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=5.8e-39 Score=345.51 Aligned_cols=257 Identities=16% Similarity=0.257 Sum_probs=198.2
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHHH-HhhccCCceeeEeeeeeccCCCCCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIEL-ISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~~-l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
..++|+..+.||+|+||.||+|+.. +|+.||||+++..... ...++..|..+ ++.++||||+++++++.+.+.
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~---- 124 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGD---- 124 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSC----
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCc----
Confidence 3467888899999999999999964 7999999999755322 23455666665 778899999999999986433
Q ss_pred cceEEEEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCC
Q 004195 555 ISIIYLIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
.++||||+++ +|.+++.. ....+++..+..++.|+++||+|||+. .+|+||||||+||+++.++.+||+||
T Consensus 125 ---~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Df 198 (340)
T 3an0_A 125 ---VWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDF 198 (340)
T ss_dssp ---EEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCC
T ss_pred ---EEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeC
Confidence 8999999975 99888762 345799999999999999999999963 28999999999999999999999999
Q ss_pred CCchhhhccCC-cceeecCCCcchhhhc----cCCCCCCCCeeehhHHHHHHHhCCCCCCCch--hHHHHhhhhhccccc
Q 004195 632 NLPLLAEARGK-GSAEVSSPAKKTSVLA----RTEQDDKSDVYDIGIILIEIIVGRPITSENV--VVLVKDLLQVNIGTD 704 (769)
Q Consensus 632 Gla~~~~~~~~-~~~~~~~~~~~pe~~~----~~~~~~ksDVwS~Gvil~elltG~~p~~~~~--~~~~~~~~~~~~~~~ 704 (769)
|+++....... ....++..|++||.+. ...++.++|||||||++|||+||+.||.... ...........
T Consensus 199 g~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~---- 274 (340)
T 3an0_A 199 GISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP---- 274 (340)
T ss_dssp SHHHHHSCHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSC----
T ss_pred CCceecccccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCC----
Confidence 99876533211 1123456788899853 3468999999999999999999999997532 12222211110
Q ss_pred cccccccCccc-cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 705 EARKSIVDPAV-MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 705 ~~~~~~~d~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
.+.. ...++ .++.+++.+||+.||++|||+.|+++|+||.....
T Consensus 275 -------~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 319 (340)
T 3an0_A 275 -------SPQLPADKFS----AEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHES 319 (340)
T ss_dssp -------CCCCCGGGSC----HHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHTT
T ss_pred -------CCCCCcccCC----HHHHHHHHHHccCCcccCcCHHHHhcCcCcccccc
Confidence 0111 01233 34889999999999999999999999999986543
No 205
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.1e-38 Score=336.14 Aligned_cols=262 Identities=13% Similarity=0.123 Sum_probs=204.5
Q ss_pred hcCCCCcCccccCCceeEEEEEe-CCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKL-TDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|++++++++|++++..++++... ...
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~------~~~ 79 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAE------GDY 79 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEE------TTE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCC------CCc
Confidence 46788999999999999999996 479999999987543 335689999999999998888777776542 234
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee---CCCceeeecCCCCc
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL---DENFHVKINSYNLP 634 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~kl~DFGla 634 (769)
.++||||+ +++|.+++......+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 80 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 155 (296)
T 3uzp_A 80 NVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred eEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence 79999999 8999999984445799999999999999999999999 99999999999999 48899999999999
Q ss_pred hhhhccCC---------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh----HHHHhhhhhcc
Q 004195 635 LLAEARGK---------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV----VLVKDLLQVNI 701 (769)
Q Consensus 635 ~~~~~~~~---------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~----~~~~~~~~~~~ 701 (769)
+....... ....++..|++||...+..++.++|||||||++|||+||+.||..... .....+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 235 (296)
T 3uzp_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM 235 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccccc
Confidence 76543221 223455678889999888899999999999999999999999975321 11111111100
Q ss_pred ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhccccc
Q 004195 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLKE 763 (769)
Q Consensus 702 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~~~ 763 (769)
.. ..+.+...+++ .+.+++.+||+.||++|||++++++.+.......+...
T Consensus 236 ~~-------~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~ 286 (296)
T 3uzp_A 236 ST-------PIEVLCKGYPS----EFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSY 286 (296)
T ss_dssp HS-------CHHHHTTTSCH----HHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCS
T ss_pred CC-------chHHHHhhCCH----HHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCcc
Confidence 00 00111123343 38899999999999999999999999987765554443
No 206
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-38 Score=341.19 Aligned_cols=268 Identities=20% Similarity=0.303 Sum_probs=201.1
Q ss_pred HHHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhc--cCCceeeEeeeeeccCCCCC
Q 004195 476 KEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL--RHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 476 ~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l--~H~nIv~l~~~~~~~~~~~~ 553 (769)
....++|+..+.||+|+||.||+|+.. |+.||||++... ....+.+|.+++... +||||+++++++.+...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~--- 105 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTG--- 105 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG---
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC---
Confidence 344568999999999999999999986 899999998643 234556666666655 89999999999876422
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCC-----CCCccccCccccceeeCCCceeee
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI-----VPGVFSNNLKITDVLLDENFHVKI 628 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDlKp~NILld~~~~~kl 628 (769)
.....++||||+++|+|.++++.. .+++..+..++.|++.||+|||+.+ .++|+||||||+||+++.++.+||
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred CCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence 124589999999999999999754 5899999999999999999999852 448999999999999999999999
Q ss_pred cCCCCchhhhccCC------cceeecCCCcchhhhccCCCCCC------CCeeehhHHHHHHHhC----------CCCCC
Q 004195 629 NSYNLPLLAEARGK------GSAEVSSPAKKTSVLARTEQDDK------SDVYDIGIILIEIIVG----------RPITS 686 (769)
Q Consensus 629 ~DFGla~~~~~~~~------~~~~~~~~~~~pe~~~~~~~~~k------sDVwS~Gvil~elltG----------~~p~~ 686 (769)
+|||+++....... ....++..|++||.+.+..++.+ +|||||||++|||+|| +.||.
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~ 263 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263 (337)
T ss_dssp CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence 99999965432221 12234566788998877766665 9999999999999999 55553
Q ss_pred Cch-----hHHHHhhhhhccccccccccccCccccCC-CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 687 ENV-----VVLVKDLLQVNIGTDEARKSIVDPAVMNE-CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 687 ~~~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
... .......... ....+..... ...+...++.+++.+||+.||++|||+.|+++++....+.++
T Consensus 264 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 264 DLVPSDPSYEDMREIVCI---------KKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp TTSCSSCCHHHHHHHHTT---------SCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred hhcCCCCchhhhHHHHhh---------hccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 211 0111111000 0011111111 123567779999999999999999999999999998776554
Q ss_pred c
Q 004195 761 L 761 (769)
Q Consensus 761 ~ 761 (769)
.
T Consensus 335 ~ 335 (337)
T 3mdy_A 335 I 335 (337)
T ss_dssp C
T ss_pred c
Confidence 3
No 207
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=349.12 Aligned_cols=268 Identities=15% Similarity=0.186 Sum_probs=206.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC-CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK-KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.. ...
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-----~~~ 83 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT-----TRH 83 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT-----TCC
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCC-----CCe
Confidence 46788899999999999999976 59999999997543 234567889999999999999999999987643 224
Q ss_pred EEEEEeccCCCchhhhhcCCC--CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee----CCCceeeecCC
Q 004195 558 IYLIFEYAPNETLRSFISGPG--YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL----DENFHVKINSY 631 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl----d~~~~~kl~DF 631 (769)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DF 160 (396)
T 4eut_A 84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160 (396)
T ss_dssp EEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCG
T ss_pred eEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecC
Confidence 799999999999999998532 2389999999999999999999999 99999999999999 88889999999
Q ss_pred CCchhhhccC-CcceeecCCCcchhhhcc--------CCCCCCCCeeehhHHHHHHHhCCCCCCCch-----hHHHHhhh
Q 004195 632 NLPLLAEARG-KGSAEVSSPAKKTSVLAR--------TEQDDKSDVYDIGIILIEIIVGRPITSENV-----VVLVKDLL 697 (769)
Q Consensus 632 Gla~~~~~~~-~~~~~~~~~~~~pe~~~~--------~~~~~ksDVwS~Gvil~elltG~~p~~~~~-----~~~~~~~~ 697 (769)
|+++...... .....++..|++||.+.+ ..++.++|||||||++|||+||+.||.... ........
T Consensus 161 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~ 240 (396)
T 4eut_A 161 GAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (396)
T ss_dssp GGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHH
T ss_pred CCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHh
Confidence 9997654332 222334567788987754 467889999999999999999999986321 12222221
Q ss_pred hhccccccccccc---------c--CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 698 QVNIGTDEARKSI---------V--DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 698 ~~~~~~~~~~~~~---------~--d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
... ....+..+ . +.......+......+.+++.+||+.||++||+++|+++++..+-+
T Consensus 241 ~~~--p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 241 TGK--PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp HSC--CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred cCC--CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 110 00000000 0 0111223457778889999999999999999999999999876543
No 208
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.1e-38 Score=369.62 Aligned_cols=244 Identities=17% Similarity=0.224 Sum_probs=195.8
Q ss_pred CccccCCceeEEEEEeC---CCcEEEEEEccccCCC--ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceEEE
Q 004195 486 SFMCDASHGQIYKGKLT---DGTLVAIRSLKMSKKS--SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~---~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
+.||+|+||.||+|.+. +++.||||+++..... ..+++.+|++++++++|||||+++++|.+. ..++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--------~~~l 446 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE--------SWML 446 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS--------SEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC--------CEEE
Confidence 57999999999999653 4678999999865332 246799999999999999999999999642 2789
Q ss_pred EEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhcc
Q 004195 561 IFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEAR 640 (769)
Q Consensus 561 V~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~ 640 (769)
|||||++|+|.+++.... .+++..+..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 447 v~E~~~~g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~ 522 (635)
T 4fl3_A 447 VMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 522 (635)
T ss_dssp EEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-
T ss_pred EEEccCCCCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccC
Confidence 999999999999997543 689999999999999999999999 9999999999999999999999999999765433
Q ss_pred CC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccccccccCcc
Q 004195 641 GK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKSIVDPA 714 (769)
Q Consensus 641 ~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 714 (769)
.. ....++..|++||.+....++.++|||||||++|||+| |+.||.......+...+.... .+.
T Consensus 523 ~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~----------~~~ 592 (635)
T 4fl3_A 523 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE----------RMG 592 (635)
T ss_dssp ------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC----------CCC
T ss_pred ccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC----------CCC
Confidence 21 11122345788999988899999999999999999999 999998765443333222111 111
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
....+++ ++.+++.+||+.||++||++++|++.+...
T Consensus 593 ~p~~~~~----~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 593 CPAGCPR----EMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp CCTTCCH----HHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCCH----HHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 1223343 489999999999999999999999988743
No 209
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=9.1e-39 Score=341.25 Aligned_cols=255 Identities=20% Similarity=0.250 Sum_probs=196.6
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC--------CChhHHHHHHHHHhhccCCceeeEeeeeeccC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK--------SSPHMYTYHIELISKLRHSNLVSALGHCLDFS 549 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~--------~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~ 549 (769)
.++|...+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 457889999999999999999976 689999999975421 12245889999999999999999999986422
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce---e
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH---V 626 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~---~ 626 (769)
.++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +
T Consensus 89 --------~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~ 156 (322)
T 2ycf_A 89 --------YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLI 156 (322)
T ss_dssp --------EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCE
T ss_pred --------eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeE
Confidence 799999999999999997554 689999999999999999999999 9999999999999987654 9
Q ss_pred eecCCCCchhhhccCC-cceeecCCCcchhhhc---cCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhcc
Q 004195 627 KINSYNLPLLAEARGK-GSAEVSSPAKKTSVLA---RTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNI 701 (769)
Q Consensus 627 kl~DFGla~~~~~~~~-~~~~~~~~~~~pe~~~---~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~ 701 (769)
||+|||+++....... ....++..|.+||.+. ...++.++|||||||++|||+||++||...... .....+....
T Consensus 157 kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 236 (322)
T 2ycf_A 157 KITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK 236 (322)
T ss_dssp EECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTC
T ss_pred EEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCc
Confidence 9999999865432211 1223456778898863 467899999999999999999999999753321 1111111100
Q ss_pred ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 702 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
. ...+.....+++ .+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 237 ~-------~~~~~~~~~~~~----~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~ 280 (322)
T 2ycf_A 237 Y-------NFIPEVWAEVSE----KALDLVKKLLVVDPKARFTTEEALRHPWLQD 280 (322)
T ss_dssp C-------CCCHHHHTTSCH----HHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred c-------ccCchhhhhcCH----HHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence 0 001111122333 4889999999999999999999999999854
No 210
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=4.3e-39 Score=347.18 Aligned_cols=262 Identities=11% Similarity=0.082 Sum_probs=193.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC----CCcEEEEEEccccCCC-----------ChhHHHHHHHHHhhccCCceeeEeee
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT----DGTLVAIRSLKMSKKS-----------SPHMYTYHIELISKLRHSNLVSALGH 544 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~~~~~~~~-----------~~~~~~~Ei~~l~~l~H~nIv~l~~~ 544 (769)
++|...+.||+|+||.||+|+.. ++..||||++...... ..+.+.+|+.+++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888999999999999999975 5789999998754221 12346678888999999999999999
Q ss_pred eeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc
Q 004195 545 CLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF 624 (769)
Q Consensus 545 ~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~ 624 (769)
+.+... .....++||||+ +++|.+++...+ .+++.++..++.|+++||+|||+. +|+||||||+||+++.++
T Consensus 117 ~~~~~~---~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 117 GLTEFK---GRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEESS---SCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred cccccC---CCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 976321 234689999999 999999998655 799999999999999999999999 999999999999998887
Q ss_pred --eeeecCCCCchhhhccCC---------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH--
Q 004195 625 --HVKINSYNLPLLAEARGK---------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-- 691 (769)
Q Consensus 625 --~~kl~DFGla~~~~~~~~---------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-- 691 (769)
.+||+|||+++....... ....++..|++||.+.+..++.++|||||||++|||+||+.||......
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~ 268 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV 268 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence 999999999965532211 2223456788899998888999999999999999999999999642211
Q ss_pred HHHhhhhhcc-ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 692 LVKDLLQVNI-GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 692 ~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.......... ........... ...+++ ++.+++.+||+.||++||++++|++.++...
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 269 AVQTAKTNLLDELPQSVLKWAP---SGSSCC----EIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHHHHHHHTTTHHHHHHSC---TTSCCH----HHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HHHHHHHhhcccccHHHHhhcc---ccccHH----HHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 1111110000 00000000000 012333 4899999999999999999999999998643
No 211
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.8e-38 Score=336.04 Aligned_cols=260 Identities=17% Similarity=0.292 Sum_probs=194.2
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC----CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT----DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLD 551 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~ 551 (769)
..++|...+.||+|+||.||+|+.. ++..||||+++...... .+.+.+|+.++++++||||+++++++.+....
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 4567888899999999999999854 34589999997553322 35688999999999999999999999864421
Q ss_pred CCCcceEEEEEeccCCCchhhhhc-----CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCcee
Q 004195 552 DPSISIIYLIFEYAPNETLRSFIS-----GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHV 626 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~~l~-----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~ 626 (769)
.....++||||+++|+|.+++. .....+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+
T Consensus 112 --~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 112 --GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCE
T ss_pred --CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcE
Confidence 1234699999999999999984 2334699999999999999999999998 99999999999999999999
Q ss_pred eecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcc
Q 004195 627 KINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNI 701 (769)
Q Consensus 627 kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~ 701 (769)
||+|||+++....... ........|.+||...+..++.++|||||||++|||+| |++||...........+...
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~- 265 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG- 265 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcC-
Confidence 9999999976533221 11122335778999888899999999999999999999 88888764433222211110
Q ss_pred ccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 702 GTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 702 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
..+.....+++ .+.+++.+||+.||++|||+.++++++....
T Consensus 266 ---------~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 266 ---------HRLKQPEDCLD----ELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp ---------CCCCCBTTCCH----HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---------CCCCCCccccH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 01111223343 4889999999999999999999999998653
No 212
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=349.76 Aligned_cols=266 Identities=20% Similarity=0.292 Sum_probs=186.1
Q ss_pred CCCC-cCccccCCceeEEEEEeC---CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 481 CFDS-SSFMCDASHGQIYKGKLT---DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 481 ~f~~-~~~iG~G~~g~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.|+. .++||+|+||+||+|+.. +++.||||++... ...+.+.+|++++++++|||||++++++.+.. ..
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~~ 93 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHA-----DR 93 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETT-----TT
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCC-----CC
Confidence 3554 458999999999999965 5789999999744 23457899999999999999999999996522 23
Q ss_pred eEEEEEeccCCCchhhhhcC--------CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee----CCCc
Q 004195 557 IIYLIFEYAPNETLRSFISG--------PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL----DENF 624 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~--------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl----d~~~ 624 (769)
..++||||++ |+|.+++.. ....+++..+..|+.||+.||+|||+. +|+||||||+|||+ +.++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 94 KVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTT
T ss_pred eEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCC
Confidence 5899999997 588887751 122589999999999999999999999 99999999999999 7789
Q ss_pred eeeecCCCCchhhhccC-----CcceeecCCCcchhhhccC-CCCCCCCeeehhHHHHHHHhCCCCCCCchh--------
Q 004195 625 HVKINSYNLPLLAEARG-----KGSAEVSSPAKKTSVLART-EQDDKSDVYDIGIILIEIIVGRPITSENVV-------- 690 (769)
Q Consensus 625 ~~kl~DFGla~~~~~~~-----~~~~~~~~~~~~pe~~~~~-~~~~ksDVwS~Gvil~elltG~~p~~~~~~-------- 690 (769)
.+||+|||+++...... .....++..|++||.+.+. .++.++|||||||++|||+||++||.....
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~ 249 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPY 249 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCC
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccc
Confidence 99999999997654321 1223445668889988764 589999999999999999999999964322
Q ss_pred --HHHHhhhhh-cccccccccccc------------CccccCCCCH---------HHHHHHHHHHHHcCcCCCCCCCCHH
Q 004195 691 --VLVKDLLQV-NIGTDEARKSIV------------DPAVMNECSD---------ESLKRMMELCLRCLSNEPKDRPSVE 746 (769)
Q Consensus 691 --~~~~~~~~~-~~~~~~~~~~~~------------d~~~~~~~~~---------~~~~~l~~li~~cl~~dP~~RPs~~ 746 (769)
+....+... .......+..+. .......+.. .....+.+|+.+||+.||++|||++
T Consensus 250 ~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~ 329 (405)
T 3rgf_A 250 HHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSE 329 (405)
T ss_dssp CHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHH
T ss_pred hHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHH
Confidence 111111111 011111111110 0000000000 0023478999999999999999999
Q ss_pred HHHHHhHhhhh
Q 004195 747 DTLWNLQFATQ 757 (769)
Q Consensus 747 evl~~l~~~~~ 757 (769)
|+++|+||...
T Consensus 330 e~L~hp~f~~~ 340 (405)
T 3rgf_A 330 QAMQDPYFLED 340 (405)
T ss_dssp HHHTSGGGTSS
T ss_pred HHhcChhhccC
Confidence 99999999754
No 213
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=9.2e-39 Score=340.09 Aligned_cols=263 Identities=19% Similarity=0.269 Sum_probs=205.6
Q ss_pred HHHHHHHhcCCCCcCccccCCceeEEEEEe------CCCcEEEEEEccccCCC-ChhHHHHHHHHHhhc-cCCceeeEee
Q 004195 472 LDELKEATDCFDSSSFMCDASHGQIYKGKL------TDGTLVAIRSLKMSKKS-SPHMYTYHIELISKL-RHSNLVSALG 543 (769)
Q Consensus 472 ~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~nIv~l~~ 543 (769)
..+..-..++|...+.||+|+||.||+|+. .+++.||||+++..... ..+.+.+|++++.++ +||||+++++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence 344444567899999999999999999984 25689999999754321 235688999999999 7999999999
Q ss_pred eeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCC---------------CCCHHHHHHHHHHHHHHhcccccCCCCCc
Q 004195 544 HCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGY---------------KLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608 (769)
Q Consensus 544 ~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~---------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 608 (769)
+|.+.+ ...++||||+++|+|.+++..... .+++..+..++.|+++||+|||+. +|
T Consensus 99 ~~~~~~------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i 169 (316)
T 2xir_A 99 ACTKPG------GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KC 169 (316)
T ss_dssp EECCTT------SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred EEecCC------CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 987532 237999999999999999985432 289999999999999999999999 99
Q ss_pred cccCccccceeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCC
Q 004195 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRP 683 (769)
Q Consensus 609 vHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~ 683 (769)
+||||||+||+++.++.+||+|||+++....... ....++..|++||.+.+..++.++|||||||++|||+| |+.
T Consensus 170 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~ 249 (316)
T 2xir_A 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249 (316)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred ccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999975533221 12233456888999888899999999999999999998 999
Q ss_pred CCCCchh-HHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 684 ITSENVV-VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 684 p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
||..... ......+... ..+.....+++ .+.+++.+||+.||++|||+.|+++++....+
T Consensus 250 p~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 250 PYPGVKIDEEFCRRLKEG----------TRMRAPDYTTP----EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp SSTTCCCSHHHHHHHHHT----------CCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCcccchhHHHHHHhccC----------ccCCCCCCCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 9865432 1111111110 01111122333 48899999999999999999999999987654
No 214
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.4e-38 Score=344.36 Aligned_cols=268 Identities=19% Similarity=0.256 Sum_probs=201.9
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|...+.||+|+||.||+|+.. +|+.||||++...... ....+.+|++++++++||||+++++++...... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~~~ 87 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFE--NFN 87 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCST--TCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccC--ccc
Confidence 467888999999999999999976 6999999999743221 235678999999999999999999998754321 134
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||++ |+|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARI 161 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccccc
Confidence 5899999997 6999998753 589999999999999999999999 999999999999999999999999999965
Q ss_pred hhccCC------------cceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccc
Q 004195 637 AEARGK------------GSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGT 703 (769)
Q Consensus 637 ~~~~~~------------~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~ 703 (769)
...... ....++..|++||.+.. ..++.++|||||||++|||++|++||...........+....+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (353)
T 2b9h_A 162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGT 241 (353)
T ss_dssp CC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred cccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Confidence 432211 11123455788997654 67899999999999999999999999765433221111111111
Q ss_pred cc---ccc--------ccc-------C---ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 704 DE---ARK--------SIV-------D---PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 704 ~~---~~~--------~~~-------d---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.. ... +.. . +.....+ ..++.+++.+||+.||++|||++|+++|+|+....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRV----NPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTS----CHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccC----CHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence 00 000 000 0 0001122 34488999999999999999999999999997543
No 215
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3.1e-39 Score=344.24 Aligned_cols=264 Identities=19% Similarity=0.285 Sum_probs=199.8
Q ss_pred CCCcCccccCCceeEEEEEeC-----CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-----DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-----~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
|...+.||+|+||+||++.+. +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+.+ .
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~ 107 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG-----A 107 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----T
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCC-----C
Confidence 477899999999999988643 588999999975422 22356899999999999999999999998632 2
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 108 ASLQLVMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp TEEEEEECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred ceEEEEEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccc
Confidence 3589999999999999999865 489999999999999999999999 99999999999999999999999999997
Q ss_pred hhhccCC-----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccc--cccccc
Q 004195 636 LAEARGK-----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIG--TDEARK 708 (769)
Q Consensus 636 ~~~~~~~-----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~--~~~~~~ 708 (769)
....... .....+..|++||.+.+..++.++|||||||++|||+||+.||.......... ...... ......
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~ 261 (318)
T 3lxp_A 183 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLEL-IGIAQGQMTVLRLT 261 (318)
T ss_dssp ECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH-HCSCCHHHHHHHHH
T ss_pred cccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhh-hcccccchhHHHHH
Confidence 6543221 11122334788999888889999999999999999999999987543221110 000000 000001
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 709 SIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 709 ~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
+.++.......+...+..+.+++.+||+.||++|||++|+++.+....
T Consensus 262 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 262 ELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 111111111112223345899999999999999999999999988653
No 216
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=340.12 Aligned_cols=269 Identities=17% Similarity=0.240 Sum_probs=199.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|...+.||+|+||.||+|+.. +|+.||||++....... .+.+.+|+.++++++||||+++++++.+.... ....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~~~~ 102 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSL-RNFY 102 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSG-GGCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccc-ccce
Confidence 46788899999999999999975 69999999997543222 35688999999999999999999998764321 0112
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||++ |+|.+++.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 3599999997 699988853 489999999999999999999999 999999999999999999999999999976
Q ss_pred hhccCCcceeecCCCcchhhhcc-CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHH-HHhhhhhcccc-ccccccc---
Q 004195 637 AEARGKGSAEVSSPAKKTSVLAR-TEQDDKSDVYDIGIILIEIIVGRPITSENVVVL-VKDLLQVNIGT-DEARKSI--- 710 (769)
Q Consensus 637 ~~~~~~~~~~~~~~~~~pe~~~~-~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~-~~~~~~~~~~~-~~~~~~~--- 710 (769)
..... ....++..|++||.+.+ ..++.++|||||||++|||+||+.||....... ...+....... .+....+
T Consensus 176 ~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 254 (353)
T 3coi_A 176 ADAEM-TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK 254 (353)
T ss_dssp ---------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCH
T ss_pred CCCCc-cccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhH
Confidence 54322 22334566788998766 678999999999999999999999997654322 22211110000 0000000
Q ss_pred ------------cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 711 ------------VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 711 ------------~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
..+.+ ....+.....+.+++.+|++.||++|||++|+++|+||....
T Consensus 255 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~ 313 (353)
T 3coi_A 255 AAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 313 (353)
T ss_dssp HHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred HHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence 00000 111122334589999999999999999999999999997543
No 217
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=343.79 Aligned_cols=258 Identities=16% Similarity=0.181 Sum_probs=197.9
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
++|...+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++||||+++++++..... .....
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~~~~ 105 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERG---AKHEA 105 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEET---TEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccC---CCcee
Confidence 56888999999999999999974 799999999976544445678999999999999999999999874221 23458
Q ss_pred EEEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 559 YLIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
++||||+++|+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~ 182 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMN 182 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcch
Confidence 999999999999999873 345799999999999999999999999 99999999999999999999999999875
Q ss_pred hhhccCC-----------cceeecCCCcchhhhccCC---CCCCCCeeehhHHHHHHHhCCCCCCCchhH--HHHhhhhh
Q 004195 636 LAEARGK-----------GSAEVSSPAKKTSVLARTE---QDDKSDVYDIGIILIEIIVGRPITSENVVV--LVKDLLQV 699 (769)
Q Consensus 636 ~~~~~~~-----------~~~~~~~~~~~pe~~~~~~---~~~ksDVwS~Gvil~elltG~~p~~~~~~~--~~~~~~~~ 699 (769)
....... ....++..|.+||.+.... ++.++|||||||++|||++|+.||...... ........
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~ 262 (317)
T 2buj_A 183 QACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN 262 (317)
T ss_dssp ESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC
T ss_pred hcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc
Confidence 4321110 1112245677888875443 689999999999999999999998532110 01110100
Q ss_pred ccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.........+++ .+.+++.+||+.||++|||+.|++++++....
T Consensus 263 ----------~~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 263 ----------QLSIPQSPRHSS----ALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp ----------C--CCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred ----------cCCCCccccCCH----HHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 000111122333 48899999999999999999999999986644
No 218
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.4e-38 Score=335.36 Aligned_cols=264 Identities=13% Similarity=0.125 Sum_probs=200.8
Q ss_pred HHhcCCCCcCccccCCceeEEEEEe-CCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKL-TDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
...++|...+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|++++++++|++++..++++... .
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~------~ 77 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAE------G 77 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEE------T
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCC------C
Confidence 3457899999999999999999996 478999999876443 234688999999999998888887777542 2
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee---CCCceeeecCCC
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL---DENFHVKINSYN 632 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~kl~DFG 632 (769)
...++||||+ +++|.+++......+++..+..++.|+++||+|||+. +|+||||||+||++ ++++.+||+|||
T Consensus 78 ~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg 153 (296)
T 4hgt_A 78 DYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFG 153 (296)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCT
T ss_pred CceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCc
Confidence 3479999999 8999999985455799999999999999999999999 99999999999999 788999999999
Q ss_pred CchhhhccCC---------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH----HHHhhhhh
Q 004195 633 LPLLAEARGK---------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV----LVKDLLQV 699 (769)
Q Consensus 633 la~~~~~~~~---------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~----~~~~~~~~ 699 (769)
+++....... ....++..|++||...+..++.++|||||||++|||+||+.||...... ........
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 233 (296)
T 4hgt_A 154 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK 233 (296)
T ss_dssp TCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHH
T ss_pred cceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcc
Confidence 9976543221 1233455678899998888999999999999999999999999753211 11111110
Q ss_pred ccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhccccc
Q 004195 700 NIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQGLKE 763 (769)
Q Consensus 700 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~~~~ 763 (769)
.... ..+.....+++ .+.+++.+||+.||++|||++++++.+....+..+...
T Consensus 234 ~~~~-------~~~~~~~~~~~----~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~ 286 (296)
T 4hgt_A 234 KMST-------PIEVLCKGYPS----EFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSY 286 (296)
T ss_dssp HHHS-------CHHHHTTTSCH----HHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCT
T ss_pred cccc-------hhhhhhccCCH----HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCc
Confidence 0000 00111122333 48899999999999999999999999987765554433
No 219
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=8.2e-39 Score=343.52 Aligned_cols=263 Identities=16% Similarity=0.186 Sum_probs=179.9
Q ss_pred HhcCCCCc-CccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHH-HHhhccCCceeeEeeeeeccCCCCCC
Q 004195 478 ATDCFDSS-SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIE-LISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 478 ~t~~f~~~-~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~-~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
..++|... +.||+|+||.||+|+.. +|+.||||++... ....+|+. .++.++||||+++++++..... .
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~---~ 97 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHH---G 97 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET---T
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccC---C
Confidence 35678774 46999999999999976 7999999998642 22333433 4566789999999999875322 2
Q ss_pred cceEEEEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC---CceeeecC
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE---NFHVKINS 630 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~kl~D 630 (769)
....++||||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 98 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 98 KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred CceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEec
Confidence 345899999999999999998543 4699999999999999999999999 9999999999999976 45699999
Q ss_pred CCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 631 YNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 631 FGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
||+++...........++..|++||.+....++.++|||||||++|||+||+.||.................. ....
T Consensus 175 fg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~- 251 (336)
T 3fhr_A 175 FGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRL--GQYG- 251 (336)
T ss_dssp CTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------C-
T ss_pred cccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhc--cccc-
Confidence 9999765544444445566788899887788899999999999999999999999754432211100000000 0000
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
........+++ .+.+++.+||+.||++|||++|+++|+|+....
T Consensus 252 ~~~~~~~~~~~----~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 295 (336)
T 3fhr_A 252 FPNPEWSEVSE----DAKQLIRLLLKTDPTERLTITQFMNHPWINQSM 295 (336)
T ss_dssp CCTTTSTTCCH----HHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred cCchhhccCCH----HHHHHHHHHCCCChhHCcCHHHHhcCccccccc
Confidence 01111122333 488999999999999999999999999997643
No 220
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=8.4e-39 Score=343.21 Aligned_cols=256 Identities=20% Similarity=0.262 Sum_probs=201.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CC-----cEEEEEEccccCC-CChhHHHHHHHHHhhc-cCCceeeEeeeeeccCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DG-----TLVAIRSLKMSKK-SSPHMYTYHIELISKL-RHSNLVSALGHCLDFSL 550 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g-----~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~ 550 (769)
.++|...+.||+|+||.||+|+.. ++ ..||+|.+..... ...+.+.+|+++++++ +||||++++++|.+.+.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 467888999999999999999964 23 4799999975432 2235688999999999 89999999999976443
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCC-------------CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccc
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGP-------------GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITD 617 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~N 617 (769)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|
T Consensus 125 -------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~N 194 (333)
T 2i1m_A 125 -------VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARN 194 (333)
T ss_dssp -------CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred -------eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccce
Confidence 79999999999999998631 23579999999999999999999999 99999999999
Q ss_pred eeeCCCceeeecCCCCchhhhccCC----cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhH-
Q 004195 618 VLLDENFHVKINSYNLPLLAEARGK----GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVV- 691 (769)
Q Consensus 618 ILld~~~~~kl~DFGla~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~- 691 (769)
|+++.++.+||+|||+++....... ....++..|++||.+.+..++.++|||||||++|||+| |++||......
T Consensus 195 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 274 (333)
T 2i1m_A 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS 274 (333)
T ss_dssp CEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH
T ss_pred EEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH
Confidence 9999999999999999975543322 12223346888999888899999999999999999999 88898754321
Q ss_pred HHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 692 LVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.......... .+.....+++ .+.+++.+||+.||++|||+.|++++++...+.
T Consensus 275 ~~~~~~~~~~----------~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 275 KFYKLVKDGY----------QMAQPAFAPK----NIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp HHHHHHHHTC----------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC----------CCCCCCCCCH----HHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 1222111110 1111122333 488999999999999999999999999876543
No 221
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-38 Score=332.25 Aligned_cols=253 Identities=19% Similarity=0.294 Sum_probs=197.0
Q ss_pred CCCcCccccCCceeEEEEEeC-C---CcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 482 FDSSSFMCDASHGQIYKGKLT-D---GTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~-~---g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
|...+.||+|+||+||+|++. + +..||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------ 96 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG------ 96 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS------
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC------
Confidence 455689999999999999853 2 33799999975432 223578899999999999999999999975432
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..++||||+.+|+|.+++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 97 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 97 LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp CCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred CcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 24899999999999999987666899999999999999999999999 999999999999999999999999999965
Q ss_pred hhccC------CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCC-CCCCCchhHHHHhhhhhcccccccccc
Q 004195 637 AEARG------KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGR-PITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 637 ~~~~~------~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
..... ......+..|.+||...+..++.++|||||||++|||+||. +|+...........+....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~-------- 245 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR-------- 245 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTC--------
T ss_pred ccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCC--------
Confidence 43221 11122334577899988888999999999999999999954 5555433322222221110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.+.....+++ .+.+++.+||+.||++|||++|+++.+.....
T Consensus 246 --~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 287 (298)
T 3pls_A 246 --RLPQPEYCPD----SLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS 287 (298)
T ss_dssp --CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CCCCCccchH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0111122333 48899999999999999999999999987643
No 222
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.4e-38 Score=346.21 Aligned_cols=269 Identities=20% Similarity=0.210 Sum_probs=201.8
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CC-----ceeeEeeeeeccCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HS-----NLVSALGHCLDFSL 550 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~-----nIv~l~~~~~~~~~ 550 (769)
..++|...+.||+|+||+||+|+.. +++.||||+++... ...+++.+|+.+++.++ |+ +|+++++++....
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~- 129 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN- 129 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT-
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC-
Confidence 4578999999999999999999976 68899999997431 22356788999998885 55 4999999987643
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC--CCceee
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD--ENFHVK 627 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld--~~~~~k 627 (769)
..++||||++ |+|.+++... ...+++..+..++.|++.||+|||++ ..+|+||||||+|||++ .++.+|
T Consensus 130 ------~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~k 201 (382)
T 2vx3_A 130 ------HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIK 201 (382)
T ss_dssp ------EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEE
T ss_pred ------ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEE
Confidence 4899999996 5999998743 24689999999999999999999952 23899999999999994 578899
Q ss_pred ecCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhH-HHHhhhhhccccccc
Q 004195 628 INSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVV-LVKDLLQVNIGTDEA 706 (769)
Q Consensus 628 l~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~ 706 (769)
|+|||+++...... ....++..|++||.+.+..++.++|||||||++|||+||++||...... ....+..........
T Consensus 202 L~DFG~a~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~ 280 (382)
T 2vx3_A 202 IVDFGSSCQLGQRI-YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAH 280 (382)
T ss_dssp ECCCTTCEETTCCC-CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHH
T ss_pred EEeccCceeccccc-ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 99999997654332 2334456688999998889999999999999999999999999865432 222222110000000
Q ss_pred -----------cccccC----------------ccc---------------------cCCCCHHHHHHHHHHHHHcCcCC
Q 004195 707 -----------RKSIVD----------------PAV---------------------MNECSDESLKRMMELCLRCLSNE 738 (769)
Q Consensus 707 -----------~~~~~d----------------~~~---------------------~~~~~~~~~~~l~~li~~cl~~d 738 (769)
+..+.+ +.. .......+...+.+|+.+||+.|
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~d 360 (382)
T 2vx3_A 281 ILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYD 360 (382)
T ss_dssp HHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSC
T ss_pred HHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCC
Confidence 000000 000 00112334567899999999999
Q ss_pred CCCCCCHHHHHHHhHhhhh
Q 004195 739 PKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 739 P~~RPs~~evl~~l~~~~~ 757 (769)
|++|||++|+++|+||...
T Consensus 361 P~~Rpta~e~L~hp~f~~~ 379 (382)
T 2vx3_A 361 PKTRIQPYYALQHSFFKKT 379 (382)
T ss_dssp TTTSCCHHHHTTSGGGCC-
T ss_pred hhhCCCHHHHhcCcccccC
Confidence 9999999999999999754
No 223
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.5e-38 Score=333.88 Aligned_cols=254 Identities=21% Similarity=0.323 Sum_probs=196.9
Q ss_pred cCCCCcCccccCCceeEEEEEeCC----CcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTD----GTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~----g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
..|...+.||+|+||.||+|+..+ +..||+|.+..... ...+.+.+|+.++++++||||++++++|.+.+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 99 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE----- 99 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS-----
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCC-----
Confidence 347778999999999999999642 23689999875332 22357889999999999999999999976532
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
+..++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 100 -~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a 175 (298)
T 3f66_A 100 -GSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLA 175 (298)
T ss_dssp -SCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGG
T ss_pred -CceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccc
Confidence 236899999999999999987666789999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhccCC------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccc
Q 004195 635 LLAEARGK------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEAR 707 (769)
Q Consensus 635 ~~~~~~~~------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (769)
+....... ....++..|++||...+..++.++||||||+++|||+| |.+|+................
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~------ 249 (298)
T 3f66_A 176 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR------ 249 (298)
T ss_dssp CCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTC------
T ss_pred ccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCC------
Confidence 65432221 11122335788999888899999999999999999999 556665433222211111100
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.+.....+++ .+.+++.+||+.||++|||+.|+++.+....
T Consensus 250 ----~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 290 (298)
T 3f66_A 250 ----RLLQPEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRISAIF 290 (298)
T ss_dssp ----CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ----CCCCCccCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0111122333 4889999999999999999999999998654
No 224
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.5e-38 Score=332.78 Aligned_cols=250 Identities=17% Similarity=0.224 Sum_probs=196.8
Q ss_pred cCCCCcC-ccccCCceeEEEEEeC---CCcEEEEEEccccCCCC--hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 480 DCFDSSS-FMCDASHGQIYKGKLT---DGTLVAIRSLKMSKKSS--PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 480 ~~f~~~~-~iG~G~~g~Vy~~~~~---~g~~vAvK~~~~~~~~~--~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
++|...+ .||+|+||.||+|.+. +++.||||+++...... .+.+.+|++++++++||||+++++++.. .
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~---- 90 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-E---- 90 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-S----
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC-C----
Confidence 4566666 9999999999999642 47899999997653322 4678999999999999999999999843 2
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 91 ---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 163 (291)
T 1xbb_A 91 ---SWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGL 163 (291)
T ss_dssp ---SEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred ---CcEEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCc
Confidence 2799999999999999998543 689999999999999999999999 999999999999999999999999999
Q ss_pred chhhhccCCc-----ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccc
Q 004195 634 PLLAEARGKG-----SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEAR 707 (769)
Q Consensus 634 a~~~~~~~~~-----~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (769)
++........ ...++..|++||......++.++||||||+++|||+| |+.||...........+...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~------- 236 (291)
T 1xbb_A 164 SKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG------- 236 (291)
T ss_dssp CEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-------
T ss_pred ceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-------
Confidence 8655332211 1112245788998888888999999999999999999 99999765543333322211
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
..+.....+++ .+.+++.+||+.||++||++.|+++.+...
T Consensus 237 ---~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 237 ---ERMGCPAGCPR----EMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp ---CCCCCCTTCCH----HHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred ---CCCCCCCCCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 01112223343 488999999999999999999999988754
No 225
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=340.19 Aligned_cols=260 Identities=13% Similarity=0.187 Sum_probs=189.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCC-CCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLD-DPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~-~~~~~ 556 (769)
.+|...+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.+++++. ||||+++++++...... .....
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 46888999999999999999975 79999999986554444567899999999996 99999999998643221 12345
Q ss_pred eEEEEEeccCCCchhhhhcC--CCCCCCHHHHHHHHHHHHHHhcccccCCCCC--ccccCccccceeeCCCceeeecCCC
Q 004195 557 IIYLIFEYAPNETLRSFISG--PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPG--VFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
..++||||+. |+|.+++.. ....+++..+..++.|++.||+|||+. + |+||||||+|||++.++.+||+|||
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCc
Confidence 6899999996 799998862 334699999999999999999999998 7 9999999999999999999999999
Q ss_pred CchhhhccCC--------------cceeecCCCcchhhh---ccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHh
Q 004195 633 LPLLAEARGK--------------GSAEVSSPAKKTSVL---ARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKD 695 (769)
Q Consensus 633 la~~~~~~~~--------------~~~~~~~~~~~pe~~---~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~ 695 (769)
+++....... ....++..|++||.+ ....++.++|||||||++|||+||+.||........
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-- 261 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI-- 261 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh--
Confidence 9976533211 022244567788877 466789999999999999999999999975432111
Q ss_pred hhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 696 LLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 696 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
..... ........++ .+.+++.+||+.||++|||+.|++++++.......
T Consensus 262 -~~~~~----------~~~~~~~~~~----~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 262 -VNGKY----------SIPPHDTQYT----VFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp -----C----------CCCTTCCSSG----GGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred -hcCcc----------cCCcccccch----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 11000 0000111222 27889999999999999999999999998765443
No 226
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-39 Score=346.30 Aligned_cols=262 Identities=13% Similarity=0.145 Sum_probs=200.4
Q ss_pred cCCCCcCccccCCceeEEEEEeCC---------CcEEEEEEccccCCCChhHHHHHHHHHhhccCCceee----------
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTD---------GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVS---------- 540 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~---------g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~---------- 540 (769)
++|...+.||+|+||.||+|+... ++.||||.+... +.+.+|++++++++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 578889999999999999999763 789999998743 46889999999999999998
Q ss_pred -----EeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcc
Q 004195 541 -----ALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLK 614 (769)
Q Consensus 541 -----l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlK 614 (769)
+++++... ....++||||+ +++|.+++... ...+++..+..++.|+++||+|||+. +|+|||||
T Consensus 117 ~~i~~~~~~~~~~------~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dik 186 (352)
T 2jii_A 117 LAIPTCMGFGVHQ------DKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVT 186 (352)
T ss_dssp CSCCCCCEEEEET------TTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCC
T ss_pred cCccchhhccccC------CcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCC
Confidence 55555531 23589999999 99999999843 34799999999999999999999999 99999999
Q ss_pred ccceeeCCCc--eeeecCCCCchhhhccCC---------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCC
Q 004195 615 ITDVLLDENF--HVKINSYNLPLLAEARGK---------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRP 683 (769)
Q Consensus 615 p~NILld~~~--~~kl~DFGla~~~~~~~~---------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~ 683 (769)
|+||+++.++ .+||+|||+++....... ....++..|++||.+.+..++.++|||||||++|||+||+.
T Consensus 187 p~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~ 266 (352)
T 2jii_A 187 AENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFL 266 (352)
T ss_dssp GGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999998 899999999965543221 12244567788999888889999999999999999999999
Q ss_pred CCCCch--hHHHHhhhhhccccccccccccCccc-cCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 684 ITSENV--VVLVKDLLQVNIGTDEARKSIVDPAV-MNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 684 p~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
||.... ............ .....+.++.. ...+++ ++.+++.+||+.||++|||++|+++.+....+..+
T Consensus 267 pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 267 PWTNCLPNTEDIMKQKQKFV---DKPGPFVGPCGHWIRPSE----TLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp TTGGGTTCHHHHHHHHHHHH---HSCCCEECTTSCEECCCH----HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred CcccCCcCHHHHHHHHHhcc---CChhhhhhhccccCCCcH----HHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 997542 111211111100 01111111110 012233 48899999999999999999999999987765554
Q ss_pred ccc
Q 004195 761 LKE 763 (769)
Q Consensus 761 ~~~ 763 (769)
...
T Consensus 340 ~~~ 342 (352)
T 2jii_A 340 VSP 342 (352)
T ss_dssp CCT
T ss_pred CCc
Confidence 443
No 227
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=4.8e-38 Score=329.90 Aligned_cols=258 Identities=18% Similarity=0.218 Sum_probs=203.8
Q ss_pred HhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccC--CCChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSK--KSSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
..++|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 94 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS----- 94 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC-----
Confidence 3457899999999999999999976 79999999997543 334578999999999999999999999997643
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC---ceeeecCC
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN---FHVKINSY 631 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~---~~~kl~DF 631 (769)
..++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.+ +.+||+||
T Consensus 95 --~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Df 168 (287)
T 2wei_A 95 --SFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDF 168 (287)
T ss_dssp --EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECST
T ss_pred --eEEEEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEecc
Confidence 4899999999999999887443 689999999999999999999999 99999999999999754 47999999
Q ss_pred CCchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 632 NLPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 632 Gla~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
|++........ ....++..|.+||... ..++.++||||||+++|||++|++||...........+......
T Consensus 169 g~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~------- 240 (287)
T 2wei_A 169 GLSTCFQQNTKMKDRIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA------- 240 (287)
T ss_dssp TGGGTBCCCSSCSCHHHHHTTCCHHHHT-TCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-------
T ss_pred CcceeecCCCccccccCcccccChHHhc-CCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-------
Confidence 99876543322 2223445677888775 45899999999999999999999999765443322222111000
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.+......+++ ++.+++.+||+.||++|||+.|+++|+|+.+..
T Consensus 241 ~~~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 284 (287)
T 2wei_A 241 FDLPQWRTISD----DAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284 (287)
T ss_dssp CCSGGGTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHC
T ss_pred CCchhhhhcCH----HHHHHHHHHcccChhhCcCHHHHhcCHHHhccc
Confidence 01111122333 488999999999999999999999999997643
No 228
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=7.7e-38 Score=332.17 Aligned_cols=259 Identities=15% Similarity=0.215 Sum_probs=193.3
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC---hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS---PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~---~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +|+.||||+++...... .+.+.+|++++++++||||+++++++.+.+
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------ 105 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN------ 105 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT------
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC------
Confidence 46888999999999999999964 79999999997643322 356889999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcC---CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 556 SIIYLIFEYAPNETLRSFISG---PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
..++||||+++|+|.+++.. ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 106 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg 181 (310)
T 2wqm_A 106 -ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 181 (310)
T ss_dssp -EEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-
T ss_pred -cEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEecc
Confidence 38999999999999999862 334689999999999999999999999 99999999999999999999999999
Q ss_pred CchhhhccCC--cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccc
Q 004195 633 LPLLAEARGK--GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSI 710 (769)
Q Consensus 633 la~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (769)
++........ ....++..|.+||......++.++|||||||++|||++|+.||......... .... .... .
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~~~-~~~~-~---- 254 (310)
T 2wqm_A 182 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS-LCKK-IEQC-D---- 254 (310)
T ss_dssp -----------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHH-HHHH-HHTT-C----
T ss_pred ceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHH-HHHH-hhcc-c----
Confidence 9876543221 1223455678899988888999999999999999999999998654321111 0000 0000 0
Q ss_pred cCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 711 VDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 711 ~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
..+.....+++ ++.+++.+||+.||++|||+.++++++.......
T Consensus 255 ~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 255 YPPLPSDHYSE----ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp SCCCCTTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCcccccCH----HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 00111122333 4889999999999999999999999998765443
No 229
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.2e-38 Score=341.17 Aligned_cols=268 Identities=18% Similarity=0.252 Sum_probs=202.9
Q ss_pred HHHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhh--ccCCceeeEeeeeeccCCCCC
Q 004195 476 KEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISK--LRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 476 ~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~--l~H~nIv~l~~~~~~~~~~~~ 553 (769)
....++|...+.||+|+||.||+|+. +|+.||||++... ..+.+.+|++++.. ++||||+++++++.+...
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~--- 110 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNG--- 110 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS---
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC---
Confidence 34456899999999999999999998 4899999999643 34678889999887 789999999999976432
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccc--------cCCCCCccccCccccceeeCCCce
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLH--------TGIVPGVFSNNLKITDVLLDENFH 625 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDlKp~NILld~~~~ 625 (769)
.....++||||+++|+|.+++.+. .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~ 185 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGT 185 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSC
T ss_pred ccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCC
Confidence 122489999999999999999754 5899999999999999999999 66 9999999999999999999
Q ss_pred eeecCCCCchhhhccCC------cceeecCCCcchhhhccCC------CCCCCCeeehhHHHHHHHhC----------CC
Q 004195 626 VKINSYNLPLLAEARGK------GSAEVSSPAKKTSVLARTE------QDDKSDVYDIGIILIEIIVG----------RP 683 (769)
Q Consensus 626 ~kl~DFGla~~~~~~~~------~~~~~~~~~~~pe~~~~~~------~~~ksDVwS~Gvil~elltG----------~~ 683 (769)
+||+|||+++....... ....++..|.+||.+.+.. ++.++|||||||++|||+|| +.
T Consensus 186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~ 265 (342)
T 1b6c_B 186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 265 (342)
T ss_dssp EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccccc
Confidence 99999999965543221 2223455678899876542 33689999999999999999 56
Q ss_pred CCCCchhH--HHHhhhhhccccccccccccCccccCC-CCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 684 ITSENVVV--LVKDLLQVNIGTDEARKSIVDPAVMNE-CSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 684 p~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
||...... ....+..... .....+.+... ...+....+.+++.+||+.||++|||+.||++++....+..+
T Consensus 266 p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~ 339 (342)
T 1b6c_B 266 PYYDLVPSDPSVEEMRKVVC------EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 339 (342)
T ss_dssp TTTTTSCSSCCHHHHHHHHT------TSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC
T ss_pred CccccCcCcccHHHHHHHHH------HHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhc
Confidence 66432110 0011111000 00111221111 123556779999999999999999999999999998766554
Q ss_pred c
Q 004195 761 L 761 (769)
Q Consensus 761 ~ 761 (769)
.
T Consensus 340 ~ 340 (342)
T 1b6c_B 340 I 340 (342)
T ss_dssp -
T ss_pred C
Confidence 4
No 230
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.5e-39 Score=339.86 Aligned_cols=253 Identities=18% Similarity=0.267 Sum_probs=196.0
Q ss_pred HHHHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC------ChhHHHHHHHHHhhc----cCCceeeEee
Q 004195 475 LKEATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS------SPHMYTYHIELISKL----RHSNLVSALG 543 (769)
Q Consensus 475 l~~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~Ei~~l~~l----~H~nIv~l~~ 543 (769)
.....++|...+.||+|+||.||+|+.. +|+.||||+++..... ....+.+|+.++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 3445678999999999999999999965 7899999999754321 234566799999998 8999999999
Q ss_pred eeeccCCCCCCcceEEEEEec-cCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC-
Q 004195 544 HCLDFSLDDPSISIIYLIFEY-APNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD- 621 (769)
Q Consensus 544 ~~~~~~~~~~~~~~~~lV~Ey-~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld- 621 (769)
++.+.+. .++|||| +++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++
T Consensus 106 ~~~~~~~-------~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 174 (312)
T 2iwi_A 106 WFETQEG-------FMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDL 174 (312)
T ss_dssp EC------------CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEET
T ss_pred EEecCCe-------EEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeC
Confidence 9876433 7999999 78999999998543 689999999999999999999999 999999999999999
Q ss_pred CCceeeecCCCCchhhhccCCcceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhc
Q 004195 622 ENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVN 700 (769)
Q Consensus 622 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~ 700 (769)
.++.+||+|||+++...........++..|.+||...+..+ +.++|||||||++|||++|+.||...... ....
T Consensus 175 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~ 249 (312)
T 2iwi_A 175 RRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI-----LEAE 249 (312)
T ss_dssp TTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH-----HHTC
T ss_pred CCCeEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH-----hhhc
Confidence 88999999999997665444444445667888998876666 45899999999999999999999754211 1110
Q ss_pred cccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 701 IGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 701 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
..+...+++ .+.+++.+||+.||++|||++|+++|+|+....+
T Consensus 250 ------------~~~~~~~~~----~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~ 292 (312)
T 2iwi_A 250 ------------LHFPAHVSP----DCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE 292 (312)
T ss_dssp ------------CCCCTTSCH----HHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred ------------cCCcccCCH----HHHHHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence 011122333 4889999999999999999999999999876543
No 231
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=3.6e-38 Score=338.75 Aligned_cols=267 Identities=18% Similarity=0.250 Sum_probs=203.9
Q ss_pred hcCCCCcCccccCCceeEEEEEe-C-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCCc------eeeEeeeeeccCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKL-T-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSN------LVSALGHCLDFSL 550 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~-~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~n------Iv~l~~~~~~~~~ 550 (769)
.++|+..+.||+|+||.||+|.. . +|+.||||+++... ...+.+.+|+++++.++|++ ++++++++.+.+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~- 90 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG- 90 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT-
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC-
Confidence 35788899999999999999986 3 68899999997432 22467889999999987664 999999997643
Q ss_pred CCCCcceEEEEEeccCCCchhhhhcCCC-CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC-------
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFISGPG-YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE------- 622 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~------- 622 (769)
..++||||+ +++|.+++...+ ..+++..+..++.|+++||+|||+. +|+||||||+||+++.
T Consensus 91 ------~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~ 160 (339)
T 1z57_A 91 ------HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAY 160 (339)
T ss_dssp ------EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEE
T ss_pred ------cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEecccccccc
Confidence 489999999 789999987432 4689999999999999999999999 9999999999999987
Q ss_pred ------------CceeeecCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh
Q 004195 623 ------------NFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV 690 (769)
Q Consensus 623 ------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~ 690 (769)
++.+||+|||+++...... ....++..|++||.+.+..++.++|||||||++|||+||++||.....
T Consensus 161 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 239 (339)
T 1z57_A 161 NPKIKRDERTLINPDIKVVDFGSATYDDEHH-STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239 (339)
T ss_dssp C----CEEEEESCCCEEECCCSSCEETTSCC-CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH
T ss_pred CCccccccccccCCCceEeeCcccccCcccc-ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 6679999999997654322 233445678889999888999999999999999999999999976543
Q ss_pred HHHHhhhhhcccc-cccc-----------------c----------cccCcc-ccCCCCHHHHHHHHHHHHHcCcCCCCC
Q 004195 691 VLVKDLLQVNIGT-DEAR-----------------K----------SIVDPA-VMNECSDESLKRMMELCLRCLSNEPKD 741 (769)
Q Consensus 691 ~~~~~~~~~~~~~-~~~~-----------------~----------~~~d~~-~~~~~~~~~~~~l~~li~~cl~~dP~~ 741 (769)
......+...... +... . ....+. -..........++.+++.+||+.||++
T Consensus 240 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 240 KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 3222211111110 0000 0 000000 001123345677999999999999999
Q ss_pred CCCHHHHHHHhHhhhhh
Q 004195 742 RPSVEDTLWNLQFATQI 758 (769)
Q Consensus 742 RPs~~evl~~l~~~~~~ 758 (769)
|||++|+++|+||....
T Consensus 320 Rpt~~ell~hp~f~~~~ 336 (339)
T 1z57_A 320 RITLREALKHPFFDLLK 336 (339)
T ss_dssp SCCHHHHTTSGGGGGGG
T ss_pred ccCHHHHhcCHHHHHHh
Confidence 99999999999997543
No 232
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=7e-38 Score=364.87 Aligned_cols=313 Identities=16% Similarity=0.255 Sum_probs=238.4
Q ss_pred CHHHHHHHHHHHHhcCCCC---------CCCCCCCCCCCCCCCCCCCCCcceEecC-CCeeEEEeCCCCCCCCCCCCCCC
Q 004195 29 QLFQYQTLVRIQQLLNYPS---------VSSSFNTTTVTDFCNIEPTPSLTLVCYE-DNLTQLHIAGDNNNNINGGLAHN 98 (769)
Q Consensus 29 ~~~~~~~ll~~k~~~~~~~---------~l~~w~~~~~~~~c~~~~~~~~~v~C~~-~~v~~l~l~~~~~~~~~~~l~~n 98 (769)
...|+.||.+++.++..+. ...+|+.+. ++|.|. ...||+|+. ++|++|++.++.+.
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~--~~c~w~--~~~GV~C~~~~~V~~L~L~~~~l~--------- 94 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNK--ELDMWG--AQPGVSLNSNGRVTGLSLEGFGAS--------- 94 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSS--CGGGTT--CCTTEEECTTCCEEEEECTTSCCE---------
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCC--Cccccc--CCCCeEEcCCCCEEEEEecCcccC---------
Confidence 3568999999999986553 124798766 899991 112599954 68999999876544
Q ss_pred CCCCccccccCCCCCCcEEEeeccc-------------------------------------------------------
Q 004195 99 FSTDTFFSTLGSLSSLKVLSLVSLG------------------------------------------------------- 123 (769)
Q Consensus 99 ~~~~~~~~~~~~l~~L~~L~L~~n~------------------------------------------------------- 123 (769)
+.+|+.+++|++|++|+|++|.
T Consensus 95 ---g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~ 171 (636)
T 4eco_A 95 ---GRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQ 171 (636)
T ss_dssp ---EEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTT
T ss_pred ---CcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCcc
Confidence 4566778888888888887773
Q ss_pred -----------------------ccCCCCccccCCCcCceeeccCcccCCc-----------------CCcccc--CCCc
Q 004195 124 -----------------------LWGPLPGSIAHSSSLEILNLSSNYLSGS-----------------IPVQIS--SLRN 161 (769)
Q Consensus 124 -----------------------l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-----------------~p~~~~--~l~~ 161 (769)
++| +|..|+++++|++|+|++|+|+|. +|..++ ++++
T Consensus 172 ~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~ 250 (636)
T 4eco_A 172 QKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKD 250 (636)
T ss_dssp SCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTT
T ss_pred ccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCC
Confidence 335 677788888888888888888875 788887 8888
Q ss_pred CCEEEcccCcCCccCCccCcCCcCCCEEeccCCC-Ccc-cCCccccCC------CCCCEEEccCccccccCCC---CCCC
Q 004195 162 LQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS-LSG-FLPVSLTGL------QSLRVVSLSANHLSGEIPD---LRNL 230 (769)
Q Consensus 162 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l------~~L~~L~ls~N~l~~~~p~---l~~l 230 (769)
|++|+|++|++.+.+|..|+++++|++|+|++|+ ++| .+|..++++ ++|++|++++|+++ .+|. ++++
T Consensus 251 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l 329 (636)
T 4eco_A 251 LTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKM 329 (636)
T ss_dssp CCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTC
T ss_pred CCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccC
Confidence 8888888888888888888888888888888887 887 778777776 78888888888888 5554 7788
Q ss_pred ccCcEEeccCCcCCCCCccc--ccCCcEEEeCCccccCCcCchhhcCCCc-CcEEeccCccccccCCccCCCCC--CCCE
Q 004195 231 KNLRVFDVQDNYFGPRFPRL--HKKMVTLVLRNNRFQFGLNPDELRSYNQ-LQKLDISLNRFVGPFIPSLLSLP--SITY 305 (769)
Q Consensus 231 ~~L~~l~l~~N~l~~~~p~~--~~~L~~L~l~~N~~~~~i~p~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~--~L~~ 305 (769)
++|+.|++++|.++|.+|.. +++|+.|++++|.++ .+ |..+..+++ |++|++++|.++ .+|..+..++ +|+.
T Consensus 330 ~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N~l~-~l-p~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~ 406 (636)
T 4eco_A 330 KKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYNQIT-EI-PANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSA 406 (636)
T ss_dssp TTCCEEECCSCCCEEECCCCEEEEEESEEECCSSEEE-EC-CTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEE
T ss_pred CCCCEEeCcCCcCccchhhhCCCCCCCEEECCCCccc-cc-cHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCE
Confidence 88888888888888777732 357778888888887 55 777888887 888888888887 5677666554 7888
Q ss_pred EEccCCcCCccccccCC-------CCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCC
Q 004195 306 LDIHGNKLTGLLLQNMS-------CNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 306 L~l~~N~l~~~~~~~~~-------~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 362 (769)
|++++|++++.+|..+. .+++|+.|+|++|+++...+..+..+++++.+++++|.++
T Consensus 407 L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~ 470 (636)
T 4eco_A 407 IDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT 470 (636)
T ss_dssp EECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS
T ss_pred EECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC
Confidence 88888888887777777 6778888888888888444444455777888888888776
No 233
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.4e-38 Score=335.44 Aligned_cols=257 Identities=15% Similarity=0.223 Sum_probs=196.3
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCC--ChhHHHHHHHHHhhcc--CCceeeEeeeeeccCCCC
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKS--SPHMYTYHIELISKLR--HSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~--~~~~~~~Ei~~l~~l~--H~nIv~l~~~~~~~~~~~ 552 (769)
...++|...+.||+|+||.||+|+..+++.||||++...... ..+.+.+|++++++++ ||||+++++++.+..
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--- 101 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--- 101 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS---
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCC---
Confidence 345678889999999999999999888999999999754332 2357889999999997 599999999998643
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
..++||| +.+++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||++++ +.+||+|||
T Consensus 102 ----~~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg 171 (313)
T 3cek_A 102 ----YIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFG 171 (313)
T ss_dssp ----EEEEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCS
T ss_pred ----EEEEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeecc
Confidence 4899999 55789999998554 689999999999999999999999 9999999999999964 899999999
Q ss_pred CchhhhccCC----cceeecCCCcchhhhcc-----------CCCCCCCCeeehhHHHHHHHhCCCCCCCchhH--HHHh
Q 004195 633 LPLLAEARGK----GSAEVSSPAKKTSVLAR-----------TEQDDKSDVYDIGIILIEIIVGRPITSENVVV--LVKD 695 (769)
Q Consensus 633 la~~~~~~~~----~~~~~~~~~~~pe~~~~-----------~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~--~~~~ 695 (769)
+++....... ....++..|++||.... ..++.++|||||||++|||+||+.||...... ....
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 251 (313)
T 3cek_A 172 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 251 (313)
T ss_dssp SSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH
T ss_pred ccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHH
Confidence 9976543221 12234556788888754 46888999999999999999999998753221 1111
Q ss_pred hhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhcc
Q 004195 696 LLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQG 760 (769)
Q Consensus 696 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~~ 760 (769)
.... ..........+ ..+.+++.+||+.||++||+++|+++|+|+......
T Consensus 252 ~~~~----------~~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~ 302 (313)
T 3cek_A 252 IIDP----------NHEIEFPDIPE----KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 302 (313)
T ss_dssp HHCT----------TSCCCCCCCSC----HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC---
T ss_pred HHhc----------ccccCCcccch----HHHHHHHHHHccCCcccCcCHHHHhcCccccCCCCc
Confidence 1100 00011112223 348899999999999999999999999999865433
No 234
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.7e-38 Score=347.75 Aligned_cols=269 Identities=15% Similarity=0.152 Sum_probs=202.6
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc--------CCceeeEeeeeeccC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR--------HSNLVSALGHCLDFS 549 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~--------H~nIv~l~~~~~~~~ 549 (769)
.++|...+.||+|+||+||+|+.. +++.||||+++.. ....+.+.+|++++++++ |+||+++++++....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 367999999999999999999965 6899999999743 123467889999999996 788999999987422
Q ss_pred CCCCCcceEEEEEeccCCCchhhhhc-CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCc----
Q 004195 550 LDDPSISIIYLIFEYAPNETLRSFIS-GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENF---- 624 (769)
Q Consensus 550 ~~~~~~~~~~lV~Ey~~~gsL~~~l~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~---- 624 (769)
. .....++||||+. ++|.+.+. .....+++..+..++.||++||+|||+.+ +|+||||||+|||++.++
T Consensus 115 ~---~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~ 188 (397)
T 1wak_A 115 V---NGTHICMVFEVLG-HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIR 188 (397)
T ss_dssp T---TEEEEEEEECCCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHH
T ss_pred C---CCceEEEEEeccC-ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhh
Confidence 1 2346899999995 55555554 44457999999999999999999999853 899999999999999776
Q ss_pred ---------------------------------------------eeeecCCCCchhhhccCCcceeecCCCcchhhhcc
Q 004195 625 ---------------------------------------------HVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLAR 659 (769)
Q Consensus 625 ---------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~ 659 (769)
.+||+|||+++..... .....++..|++||.+.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-~~~~~gt~~y~aPE~~~~ 267 (397)
T 1wak_A 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-FTEDIQTRQYRSLEVLIG 267 (397)
T ss_dssp HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-SCSCCSCGGGCCHHHHHT
T ss_pred hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-CccCCCCCcccCChhhcC
Confidence 7999999999765443 223345667889999988
Q ss_pred CCCCCCCCeeehhHHHHHHHhCCCCCCCchh-------HHHHhhhhhcccccc-----------------ccccccCcc-
Q 004195 660 TEQDDKSDVYDIGIILIEIIVGRPITSENVV-------VLVKDLLQVNIGTDE-----------------ARKSIVDPA- 714 (769)
Q Consensus 660 ~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-------~~~~~~~~~~~~~~~-----------------~~~~~~d~~- 714 (769)
..++.++|||||||++|||+||++||..... .....+......... ....+.+..
T Consensus 268 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (397)
T 1wak_A 268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKP 347 (397)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCC
T ss_pred CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCC
Confidence 8999999999999999999999999864321 111111110000000 000000000
Q ss_pred --------ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 715 --------VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 715 --------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
-....+.+....+.+|+.+||+.||++|||++|+++|+||.
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 396 (397)
T 1wak_A 348 WGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396 (397)
T ss_dssp CCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred cchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence 00124566778899999999999999999999999999985
No 235
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1e-38 Score=340.45 Aligned_cols=250 Identities=17% Similarity=0.250 Sum_probs=202.6
Q ss_pred HHhcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC------ChhHHHHHHHHHhhcc--CCceeeEeeeeec
Q 004195 477 EATDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS------SPHMYTYHIELISKLR--HSNLVSALGHCLD 547 (769)
Q Consensus 477 ~~t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~~Ei~~l~~l~--H~nIv~l~~~~~~ 547 (769)
...++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|+.++++++ ||||+++++++.+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 34567889999999999999999965 7899999999765322 2356788999999996 5999999999986
Q ss_pred cCCCCCCcceEEEEEeccCC-CchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC-CCce
Q 004195 548 FSLDDPSISIIYLIFEYAPN-ETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD-ENFH 625 (769)
Q Consensus 548 ~~~~~~~~~~~~lV~Ey~~~-gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld-~~~~ 625 (769)
.+ ..++||||+.+ ++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++ +++.
T Consensus 120 ~~-------~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~ 188 (320)
T 3a99_A 120 PD-------SFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGE 188 (320)
T ss_dssp SS-------EEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTE
T ss_pred CC-------cEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCC
Confidence 43 48999999976 89999997543 689999999999999999999999 999999999999999 7899
Q ss_pred eeecCCCCchhhhccCCcceeecCCCcchhhhccCCC-CCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccc
Q 004195 626 VKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQ-DDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTD 704 (769)
Q Consensus 626 ~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (769)
+||+|||+++...........++..|++||.+....+ +.++|||||||++|||+||+.||...... ....
T Consensus 189 ~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-----~~~~---- 259 (320)
T 3a99_A 189 LKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----IRGQ---- 259 (320)
T ss_dssp EEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH-----HHCC----
T ss_pred EEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh-----hccc----
Confidence 9999999997665443333445566888998876665 68899999999999999999999754311 1100
Q ss_pred cccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 705 EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 705 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
......+++ ++.+++.+||+.||++|||++|+++|+|+....
T Consensus 260 --------~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 301 (320)
T 3a99_A 260 --------VFFRQRVSS----ECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 301 (320)
T ss_dssp --------CCCSSCCCH----HHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred --------ccccccCCH----HHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence 001123343 388999999999999999999999999987543
No 236
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=339.92 Aligned_cols=270 Identities=18% Similarity=0.275 Sum_probs=193.7
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHH--HhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIEL--ISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~--l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||.||+|+. +++.||||++... ....+..|.++ +..++||||+++++++.....+ ....
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~--~~~~ 86 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTAD--GRME 86 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTT--SCEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccC--CCce
Confidence 5688899999999999999987 5899999999743 23445555555 4558999999999876543321 2345
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCC------CCCccccCccccceeeCCCceeeecCC
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI------VPGVFSNNLKITDVLLDENFHVKINSY 631 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~ivHrDlKp~NILld~~~~~kl~DF 631 (769)
.++||||+++|+|.+++.... .++..+.+++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DF 164 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF 164 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCC
T ss_pred EEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeec
Confidence 799999999999999997553 589999999999999999999863 348999999999999999999999999
Q ss_pred CCchhhhccC----------CcceeecCCCcchhhhcc-------CCCCCCCCeeehhHHHHHHHhCCCCCCCch-hHHH
Q 004195 632 NLPLLAEARG----------KGSAEVSSPAKKTSVLAR-------TEQDDKSDVYDIGIILIEIIVGRPITSENV-VVLV 693 (769)
Q Consensus 632 Gla~~~~~~~----------~~~~~~~~~~~~pe~~~~-------~~~~~ksDVwS~Gvil~elltG~~p~~~~~-~~~~ 693 (769)
|+++...... .....++..|++||.+.+ ..++.++|||||||++|||+||+.|+.... ....
T Consensus 165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~ 244 (336)
T 3g2f_A 165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY 244 (336)
T ss_dssp TTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCC
T ss_pred cceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHH
Confidence 9996543221 111234556788998765 356779999999999999999976543221 1000
Q ss_pred Hhhhhhcccccc---cc-----ccccCccccCCC--CHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 694 KDLLQVNIGTDE---AR-----KSIVDPAVMNEC--SDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 694 ~~~~~~~~~~~~---~~-----~~~~d~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
............ .. .....+.+...+ ....+..+.+++.+||+.||++|||++|+++.+.....
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~ 318 (336)
T 3g2f_A 245 QMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMM 318 (336)
T ss_dssp CCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence 000000000000 00 000111111111 22456679999999999999999999999999987654
No 237
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.2e-38 Score=331.76 Aligned_cols=254 Identities=18% Similarity=0.221 Sum_probs=191.6
Q ss_pred cCCCCcCccccCCceeEEEEEeC--CCc--EEEEEEccccCCC---ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCC
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT--DGT--LVAIRSLKMSKKS---SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDD 552 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~--~g~--~vAvK~~~~~~~~---~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~ 552 (769)
++|+..+.||+|+||+||+|++. +++ .||||+++..... ..+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--- 94 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP--- 94 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC---
Confidence 46888899999999999999853 333 6999999754322 2357889999999999999999999987532
Q ss_pred CCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 553 PSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 553 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
.++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 95 -----~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg 166 (291)
T 1u46_A 95 -----MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFG 166 (291)
T ss_dssp -----CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCT
T ss_pred -----ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccc
Confidence 5899999999999999985545689999999999999999999999 99999999999999999999999999
Q ss_pred CchhhhccCCc-----ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccccc
Q 004195 633 LPLLAEARGKG-----SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEA 706 (769)
Q Consensus 633 la~~~~~~~~~-----~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (769)
+++........ ....+..|++||......++.++||||||+++|||++ |+.||...........+....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~----- 241 (291)
T 1u46_A 167 LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----- 241 (291)
T ss_dssp TCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSC-----
T ss_pred ccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccC-----
Confidence 98665332211 1122335788999888888999999999999999999 999997654332222111100
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+.....+++ .+.+++.+||+.||++|||+.++++++..+..
T Consensus 242 ----~~~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 242 ----ERLPRPEDCPQ----DIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp ----CCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred ----CCCCCCcCcCH----HHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 01111123333 48899999999999999999999999876543
No 238
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=7.7e-38 Score=340.14 Aligned_cols=244 Identities=11% Similarity=0.080 Sum_probs=192.1
Q ss_pred HhcCCCCcCccccCCceeEEEEE------eCCCcEEEEEEccccCCCChhHHHHHHHHHhhcc---CCceeeEeeeeecc
Q 004195 478 ATDCFDSSSFMCDASHGQIYKGK------LTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLR---HSNLVSALGHCLDF 548 (769)
Q Consensus 478 ~t~~f~~~~~iG~G~~g~Vy~~~------~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~---H~nIv~l~~~~~~~ 548 (769)
..++|...+.||+|+||+||+|+ ..+++.||||+++. ....++.+|++++++++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKP---ANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESS---CCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCC---CChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 34678889999999999999994 34689999999974 34567888999888886 99999999999864
Q ss_pred CCCCCCcceEEEEEeccCCCchhhhhcC----CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC--
Q 004195 549 SLDDPSISIIYLIFEYAPNETLRSFISG----PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE-- 622 (769)
Q Consensus 549 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-- 622 (769)
+. .++|||||++|+|.+++.. ....++|..++.|+.|+++||+|||+. +|+||||||+|||++.
T Consensus 140 ~~-------~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~ 209 (365)
T 3e7e_A 140 NG-------SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGF 209 (365)
T ss_dssp SC-------EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGG
T ss_pred CC-------cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccc
Confidence 43 8999999999999999972 344799999999999999999999998 9999999999999998
Q ss_pred ---------CceeeecCCCCchhhhccC----CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCch
Q 004195 623 ---------NFHVKINSYNLPLLAEARG----KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENV 689 (769)
Q Consensus 623 ---------~~~~kl~DFGla~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~ 689 (769)
++.+||+|||+|+...... .....++..|++||.+.+..++.++|||||||++|||+||+.||....
T Consensus 210 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 289 (365)
T 3e7e_A 210 LEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNE 289 (365)
T ss_dssp TCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEE
T ss_pred cCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCC
Confidence 8999999999996543221 122345667889999988889999999999999999999999986432
Q ss_pred hHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCC-CHHHHHHHhH
Q 004195 690 VVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRP-SVEDTLWNLQ 753 (769)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~l~ 753 (769)
.... . ....+..... ...+.+++.+|++.+|.+|+ +++++.+.+.
T Consensus 290 ~~~~------------~----~~~~~~~~~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~ 335 (365)
T 3e7e_A 290 GGEC------------K----PEGLFRRLPH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLK 335 (365)
T ss_dssp TTEE------------E----ECSCCTTCSS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred CCce------------e----echhccccCc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHH
Confidence 2100 0 0011101111 23467788899999999994 6666665554
No 239
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=8.7e-38 Score=334.42 Aligned_cols=261 Identities=15% Similarity=0.196 Sum_probs=181.6
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC-ChhHHHHHHH-HHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS-SPHMYTYHIE-LISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~-~~~~~~~Ei~-~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|...+.||+|+||.||+|+.. +|+.||||+++..... ...++.+|+. +++.++||||+++++++.+.+
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~------- 94 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG------- 94 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS-------
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC-------
Confidence 56788899999999999999975 7999999999754221 2235566666 677789999999999998643
Q ss_pred eEEEEEeccCCCchhhhhc----CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCC
Q 004195 557 IIYLIFEYAPNETLRSFIS----GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
..++||||++ |+|.+++. .....+++..+..++.|+++||+|||+. .+|+||||||+||+++.++.+||+|||
T Consensus 95 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg 171 (327)
T 3aln_A 95 DCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFG 171 (327)
T ss_dssp EEEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCS
T ss_pred ceEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCC
Confidence 4899999998 48887775 2234789999999999999999999984 289999999999999999999999999
Q ss_pred CchhhhccCC-cceeecCCCcchhhh----ccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcccccccc
Q 004195 633 LPLLAEARGK-GSAEVSSPAKKTSVL----ARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEAR 707 (769)
Q Consensus 633 la~~~~~~~~-~~~~~~~~~~~pe~~----~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (769)
+++....... ....++..|.+||.+ .+..++.++|||||||++|||+||+.||...... ... ...... ...
T Consensus 172 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~-~~~~~~--~~~ 247 (327)
T 3aln_A 172 ISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-FDQ-LTQVVK--GDP 247 (327)
T ss_dssp SSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------CCCCC--SCC
T ss_pred CceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-HHH-HHHHhc--CCC
Confidence 9966543322 222445567888887 4567899999999999999999999999753211 001 000000 000
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhhc
Q 004195 708 KSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQIQ 759 (769)
Q Consensus 708 ~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~~ 759 (769)
.. +.......+++ .+.+++.+||+.||++|||+.|+++|+|+....+
T Consensus 248 ~~-~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~ 294 (327)
T 3aln_A 248 PQ-LSNSEEREFSP----SFINFVNLCLTKDESKRPKYKELLKHPFILMYEE 294 (327)
T ss_dssp CC-CCCCSSCCCCH----HHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHH
T ss_pred CC-CCCcccccCCH----HHHHHHHHHhhCChhhCcCHHHHHhChHHHHhHh
Confidence 00 11111122344 4889999999999999999999999999986543
No 240
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.1e-37 Score=337.27 Aligned_cols=267 Identities=14% Similarity=0.192 Sum_probs=201.1
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CC-cEEEEEEccccCCCChhHHHHHHHHHhhccCCc------eeeEeeeeeccCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DG-TLVAIRSLKMSKKSSPHMYTYHIELISKLRHSN------LVSALGHCLDFSL 550 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g-~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~n------Iv~l~~~~~~~~~ 550 (769)
.++|...+.||+|+||+||+|+.. ++ +.||||+++... ...+.+.+|++++++++|++ ++.+++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~- 95 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG- 95 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT-
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC-
Confidence 357888999999999999999975 44 789999997432 23457888999999998766 899999887633
Q ss_pred CCCCcceEEEEEeccCCCchhhhhc-CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee---------
Q 004195 551 DDPSISIIYLIFEYAPNETLRSFIS-GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL--------- 620 (769)
Q Consensus 551 ~~~~~~~~~lV~Ey~~~gsL~~~l~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl--------- 620 (769)
..++||||+ ++++.+++. .....+++..+..++.|+++||+|||+. +|+||||||+|||+
T Consensus 96 ------~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~ 165 (355)
T 2eu9_A 96 ------HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLY 165 (355)
T ss_dssp ------EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEE
T ss_pred ------eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccc
Confidence 489999999 556666665 4334699999999999999999999998 99999999999999
Q ss_pred ----------CCCceeeecCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh
Q 004195 621 ----------DENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV 690 (769)
Q Consensus 621 ----------d~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~ 690 (769)
+.++.+||+|||+++...... ....++..|++||.+.+..++.++|||||||++|||+||++||.....
T Consensus 166 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 166 NEHKSCEEKSVKNTSIRVADFGSATFDHEHH-TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp CCC-CCCEEEESCCCEEECCCTTCEETTSCC-CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cccccccccccCCCcEEEeecCccccccccc-cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 567899999999997644322 233455678889999888999999999999999999999999976543
Q ss_pred HHHHhhhhhcccc-cccc-----------------c----------cccCc-cccCCCCHHHHHHHHHHHHHcCcCCCCC
Q 004195 691 VLVKDLLQVNIGT-DEAR-----------------K----------SIVDP-AVMNECSDESLKRMMELCLRCLSNEPKD 741 (769)
Q Consensus 691 ~~~~~~~~~~~~~-~~~~-----------------~----------~~~d~-~~~~~~~~~~~~~l~~li~~cl~~dP~~ 741 (769)
......+...... +..+ . +...+ ............++.+++.+||+.||++
T Consensus 245 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 324 (355)
T 2eu9_A 245 REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ 324 (355)
T ss_dssp HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence 3222111111110 0000 0 00000 0000112234567899999999999999
Q ss_pred CCCHHHHHHHhHhhhhh
Q 004195 742 RPSVEDTLWNLQFATQI 758 (769)
Q Consensus 742 RPs~~evl~~l~~~~~~ 758 (769)
|||++|+++|+||....
T Consensus 325 Rpt~~e~l~hp~f~~~~ 341 (355)
T 2eu9_A 325 RITLAEALLHPFFAGLT 341 (355)
T ss_dssp SCCHHHHTTSGGGGGCC
T ss_pred CcCHHHHhcChhhcCCC
Confidence 99999999999998643
No 241
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=6.6e-38 Score=341.71 Aligned_cols=272 Identities=13% Similarity=0.177 Sum_probs=204.8
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-----------CCceeeEeeeeec
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-----------HSNLVSALGHCLD 547 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-----------H~nIv~l~~~~~~ 547 (769)
++|...+.||+|+||+||+|+.. +|+.||||++.... ...+.+.+|++++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 46888999999999999999974 79999999997431 23456889999999886 8999999999876
Q ss_pred cCCCCCCcceEEEEEeccCCCchhhhhcC-CCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeC-----
Q 004195 548 FSLDDPSISIIYLIFEYAPNETLRSFISG-PGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLD----- 621 (769)
Q Consensus 548 ~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld----- 621 (769)
... .....++||||+ +++|.+++.. ....+++..+..++.||+.||+|||+.+ +|+||||||+|||++
T Consensus 98 ~~~---~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 98 KGP---NGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EET---TEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETT
T ss_pred cCC---CCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCC
Confidence 431 234689999999 8999999973 3346999999999999999999999842 899999999999994
Q ss_pred -CCceeeecCCCCchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh-------HHH
Q 004195 622 -ENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV-------VLV 693 (769)
Q Consensus 622 -~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~-------~~~ 693 (769)
..+.+||+|||+++...... ....++..|++||.+.+..++.++|||||||++|||+||+.||..... ...
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 250 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEHY-TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250 (373)
T ss_dssp TTEEEEEECCCTTCEETTBCC-CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred cCcceEEEcccccccccCCCC-CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence 45589999999997654332 233445678889999888899999999999999999999999975321 111
Q ss_pred Hhhhhhcccccc-----------------ccccccCcc---------ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHH
Q 004195 694 KDLLQVNIGTDE-----------------ARKSIVDPA---------VMNECSDESLKRMMELCLRCLSNEPKDRPSVED 747 (769)
Q Consensus 694 ~~~~~~~~~~~~-----------------~~~~~~d~~---------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 747 (769)
..+.......+. ....+.... -....+.....++.+++.+||+.||++|||++|
T Consensus 251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 330 (373)
T 1q8y_A 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG 330 (373)
T ss_dssp HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence 111111000000 000000000 011345677788999999999999999999999
Q ss_pred HHHHhHhhhhhc
Q 004195 748 TLWNLQFATQIQ 759 (769)
Q Consensus 748 vl~~l~~~~~~~ 759 (769)
+++|+||.....
T Consensus 331 ll~hp~f~~~~~ 342 (373)
T 1q8y_A 331 LVNHPWLKDTLG 342 (373)
T ss_dssp HHTCGGGTTCTT
T ss_pred HhhChhhhcccC
Confidence 999999986543
No 242
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.1e-37 Score=327.00 Aligned_cols=241 Identities=15% Similarity=0.184 Sum_probs=183.4
Q ss_pred cCCCCc-CccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHH-hhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSS-SFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELI-SKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~-~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l-~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|... +.||+|+||.||+|+.. +++.||||+++. ...+.+|++++ +..+||||+++++++.+... ...
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~---~~~ 88 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYA---GRK 88 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET---TEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcC---CCc
Confidence 456665 78999999999999975 789999999963 35688899988 55589999999999875221 134
Q ss_pred eEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC---CceeeecCCC
Q 004195 557 IIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE---NFHVKINSYN 632 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~---~~~~kl~DFG 632 (769)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred eEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 589999999999999999743 34699999999999999999999999 9999999999999998 7889999999
Q ss_pred CchhhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccC
Q 004195 633 LPLLAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVD 712 (769)
Q Consensus 633 la~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 712 (769)
++.... ...++.++|||||||++|||+||++||.................. .... ..
T Consensus 166 ~a~~~~--------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~--~~~~-~~ 222 (299)
T 3m2w_A 166 FAKETT--------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM--GQYE-FP 222 (299)
T ss_dssp TCEECT--------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCT--TCCS-SC
T ss_pred cccccc--------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhh--cccc-CC
Confidence 875332 234677999999999999999999999754322111100000000 0000 00
Q ss_pred ccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 713 PAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 713 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
+.....++ .++.+++.+||+.||++|||+.|+++|+|+....
T Consensus 223 ~~~~~~~~----~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~ 264 (299)
T 3m2w_A 223 NPEWSEVS----EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264 (299)
T ss_dssp HHHHTTSC----HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred chhcccCC----HHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence 00001223 3489999999999999999999999999997654
No 243
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.9e-37 Score=364.81 Aligned_cols=315 Identities=19% Similarity=0.235 Sum_probs=197.8
Q ss_pred ccCCHHHHHHHHHHHHhcCCCCCCCCCCCCC---CCCC--CCCCC-------CCCcceEec-CCCeeEEEeCCCCCCCCC
Q 004195 26 NQLQLFQYQTLVRIQQLLNYPSVSSSFNTTT---VTDF--CNIEP-------TPSLTLVCY-EDNLTQLHIAGDNNNNIN 92 (769)
Q Consensus 26 ~~~~~~~~~~ll~~k~~~~~~~~l~~w~~~~---~~~~--c~~~~-------~~~~~v~C~-~~~v~~l~l~~~~~~~~~ 92 (769)
+++...|++||++||+++.+| +|+.+. ..+| |.|.. ....||.|+ .++|+.|+|+++.+.
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~~----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~--- 336 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDGK----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAK--- 336 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTGG----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCE---
T ss_pred cccchHHHHHHHHHHHHcCCC----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCC---
Confidence 344567999999999999876 787654 1245 99911 111469997 478999999876554
Q ss_pred CCCCCCCCCCccccccCCCCCCcEEEe-ecccccCC--------------------------------------------
Q 004195 93 GGLAHNFSTDTFFSTLGSLSSLKVLSL-VSLGLWGP-------------------------------------------- 127 (769)
Q Consensus 93 ~~l~~n~~~~~~~~~~~~l~~L~~L~L-~~n~l~g~-------------------------------------------- 127 (769)
+.+|+.|++|++|++|+| ++|.++|.
T Consensus 337 ---------G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~ 407 (876)
T 4ecn_A 337 ---------GRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDA 407 (876)
T ss_dssp ---------EEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHH
T ss_pred ---------CcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHH
Confidence 345566667777777777 55544433
Q ss_pred --------------------------------CCccccCCCcCceeeccCcccCC-----------------cCCcccc-
Q 004195 128 --------------------------------LPGSIAHSSSLEILNLSSNYLSG-----------------SIPVQIS- 157 (769)
Q Consensus 128 --------------------------------~p~~~~~l~~L~~L~Ls~N~l~g-----------------~~p~~~~- 157 (769)
+|..|+++++|++|+|++|+|+| .+|..++
T Consensus 408 l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f 487 (876)
T 4ecn_A 408 INRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSW 487 (876)
T ss_dssp HHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCG
T ss_pred hhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhh
Confidence 56666666666666666666666 2666655
Q ss_pred -CCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCC-Ccc-cCCccccCCC-------CCCEEEccCccccccCCC-
Q 004195 158 -SLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS-LSG-FLPVSLTGLQ-------SLRVVSLSANHLSGEIPD- 226 (769)
Q Consensus 158 -~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l~-------~L~~L~ls~N~l~~~~p~- 226 (769)
+|++|++|+|++|++.+.+|..|+++++|++|+|++|+ ++| .+|..+++++ +|+.|+|++|+++ .+|.
T Consensus 488 ~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~ 566 (876)
T 4ecn_A 488 SNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPAS 566 (876)
T ss_dssp GGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCH
T ss_pred ccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCCh
Confidence 66666666666666666666666666666666666666 666 5665554443 6666666666666 4444
Q ss_pred --CCCCccCcEEeccCCcCCCCCccc--ccCCcEEEeCCccccCCcCchhhcCCCc-CcEEeccCccccccCCccCCCCC
Q 004195 227 --LRNLKNLRVFDVQDNYFGPRFPRL--HKKMVTLVLRNNRFQFGLNPDELRSYNQ-LQKLDISLNRFVGPFIPSLLSLP 301 (769)
Q Consensus 227 --l~~l~~L~~l~l~~N~l~~~~p~~--~~~L~~L~l~~N~~~~~i~p~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~ 301 (769)
++++++|+.|++++|.++ .+|.. +++|+.|+|++|.++ .+ |..+..+++ |+.|+|++|.++ .+|..+..++
T Consensus 567 ~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~N~l~-~l-p~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~ 642 (876)
T 4ecn_A 567 ASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDYNQIE-EI-PEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKS 642 (876)
T ss_dssp HHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECCSSCCS-CC-CTTSCEECTTCCEEECCSSCCC-SCCSCCCTTC
T ss_pred hhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECcCCccc-cc-hHHHhhccccCCEEECcCCCCC-cCchhhhccc
Confidence 666666666666666666 55532 345666666666666 44 556666666 666666666666 4555555543
Q ss_pred C--CCEEEccCCcCCccccccC---C--CCCCCcEEEccCCcCCCCCCccc-cccCCCceEECCCCCCC
Q 004195 302 S--ITYLDIHGNKLTGLLLQNM---S--CNPQLAFVDLSSNLLTGYLPSCL-QVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 302 ~--L~~L~l~~N~l~~~~~~~~---~--~l~~L~~l~l~~N~l~g~~p~~~-~~~~~l~~l~l~~N~l~ 362 (769)
. |+.|+|++|++++.+|... . .+++|+.|+|++|+++ .+|..+ ..+++++.|++++|.++
T Consensus 643 ~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~ 710 (876)
T 4ecn_A 643 VYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT 710 (876)
T ss_dssp SSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS
T ss_pred cCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC
Confidence 3 6666666666666544321 1 2335666666666666 334333 35566666666666665
No 244
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.9e-37 Score=345.40 Aligned_cols=255 Identities=14% Similarity=0.142 Sum_probs=197.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhccCC-ceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHS-NLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~-nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|...+.||+|+||.||+|+.. +++.||||++.... ...++.+|+++++.++|+ +|..+..++.+. .
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~-------~ 76 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEG-------D 76 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEET-------T
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeC-------C
Confidence 467889999999999999999964 79999999887543 234688999999999874 555555444432 3
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceee---CCCceeeecCCCC
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLL---DENFHVKINSYNL 633 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILl---d~~~~~kl~DFGl 633 (769)
..++||||+ +++|.+++......+++..++.|+.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+
T Consensus 77 ~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGl 152 (483)
T 3sv0_A 77 YNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGL 152 (483)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred EEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCc
Confidence 479999999 8999999985455799999999999999999999999 99999999999999 6889999999999
Q ss_pred chhhhccCC---------cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchh----HHHHhhhhhc
Q 004195 634 PLLAEARGK---------GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVV----VLVKDLLQVN 700 (769)
Q Consensus 634 a~~~~~~~~---------~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~----~~~~~~~~~~ 700 (769)
++....... ....++..|++||.+.+..++.++|||||||++|||++|+.||..... ..+..+....
T Consensus 153 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 232 (483)
T 3sv0_A 153 AKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKK 232 (483)
T ss_dssp CEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHH
T ss_pred ceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcc
Confidence 976543321 123455678889999888999999999999999999999999975322 1111111110
Q ss_pred cccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 701 IGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 701 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
.. . ..+.+...+++ ++.+++.+||+.||++||++++|++.+.....
T Consensus 233 ~~------~-~~~~l~~~~p~----~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 233 VA------T-SIEALCRGYPT----EFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp HH------S-CHHHHHTTSCH----HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred cc------c-cHHHHhcCCcH----HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 00 0 00111123343 48999999999999999999999998876644
No 245
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.7e-37 Score=344.94 Aligned_cols=252 Identities=14% Similarity=0.217 Sum_probs=189.1
Q ss_pred CCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcceEE
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~~~ 559 (769)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +|||||++++++.+.. ..+
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~-------~~~ 85 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDR-------FLY 85 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSS-------EEE
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCC-------eEE
Confidence 34456889999999998776668999999998643 245678999999887 8999999999987633 489
Q ss_pred EEEeccCCCchhhhhcCCCCC------CCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCC----------
Q 004195 560 LIFEYAPNETLRSFISGPGYK------LTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDEN---------- 623 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~---------- 623 (769)
+|||||+ |+|.+++...... .++..+..++.||+.||+|||+. +|+||||||+|||++.+
T Consensus 86 lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~ 161 (434)
T 2rio_A 86 IALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTG 161 (434)
T ss_dssp EEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred EEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccC
Confidence 9999995 6999999854311 13334578999999999999999 99999999999999754
Q ss_pred ---ceeeecCCCCchhhhccCC------cceeecCCCcchhhhcc-------CCCCCCCCeeehhHHHHHHHh-CCCCCC
Q 004195 624 ---FHVKINSYNLPLLAEARGK------GSAEVSSPAKKTSVLAR-------TEQDDKSDVYDIGIILIEIIV-GRPITS 686 (769)
Q Consensus 624 ---~~~kl~DFGla~~~~~~~~------~~~~~~~~~~~pe~~~~-------~~~~~ksDVwS~Gvil~ellt-G~~p~~ 686 (769)
+.+||+|||+++....... ....++..|++||.+.+ ..++.++|||||||++|||+| |+.||.
T Consensus 162 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~ 241 (434)
T 2rio_A 162 AENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241 (434)
T ss_dssp CCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred CCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCC
Confidence 4899999999976543221 12345667888998865 568999999999999999999 899987
Q ss_pred CchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 687 ENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
...... ..+....... +............++.+++.+||+.||++|||+.||++|+||..
T Consensus 242 ~~~~~~-~~i~~~~~~~---------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~ 301 (434)
T 2rio_A 242 DKYSRE-SNIIRGIFSL---------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP 301 (434)
T ss_dssp STTTHH-HHHHHTCCCC---------CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred CchhhH-HHHhcCCCCc---------ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence 543222 1111111110 11111223456677999999999999999999999999999853
No 246
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=331.93 Aligned_cols=252 Identities=19% Similarity=0.279 Sum_probs=194.7
Q ss_pred hcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.++|...+.||+|+||.||+|+..+ .||+|+++.... ...+.+.+|+.++++++||||+++++++.+...
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~------ 103 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH------ 103 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC------
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc------
Confidence 4578889999999999999999753 499999975432 233568889999999999999999999986443
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.++||||+++++|.+++......+++..+..++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||+++.
T Consensus 104 -~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~ 178 (319)
T 2y4i_B 104 -LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSI 178 (319)
T ss_dssp -EEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC-
T ss_pred -eEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccc
Confidence 8999999999999999987666799999999999999999999999 999999999999998 67999999999865
Q ss_pred hhccC-------CcceeecCCCcchhhhcc---------CCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhc
Q 004195 637 AEARG-------KGSAEVSSPAKKTSVLAR---------TEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVN 700 (769)
Q Consensus 637 ~~~~~-------~~~~~~~~~~~~pe~~~~---------~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~ 700 (769)
..... .....++..|.+||.+.. ..++.++|||||||++|||+||+.||...........+...
T Consensus 179 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~ 258 (319)
T 2y4i_B 179 SGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTG 258 (319)
T ss_dssp ---------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTT
T ss_pred cccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccC
Confidence 42111 111223456778887753 35788999999999999999999999865543332221111
Q ss_pred cccccccccccCcccc-CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 701 IGTDEARKSIVDPAVM-NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 701 ~~~~~~~~~~~d~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
..+... ..+++ ++.+++.+||+.||++|||+.|+++.+.....
T Consensus 259 ----------~~~~~~~~~~~~----~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~ 302 (319)
T 2y4i_B 259 ----------MKPNLSQIGMGK----EISDILLFCWAFEQEERPTFTKLMDMLEKLPK 302 (319)
T ss_dssp ----------CCCCCCCSSCCT----THHHHHHHHHCSSTTTSCCHHHHHHHHTTC--
T ss_pred ----------CCCCCCcCCCCH----HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 011111 12232 38899999999999999999999999986654
No 247
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.3e-37 Score=359.92 Aligned_cols=255 Identities=16% Similarity=0.239 Sum_probs=201.7
Q ss_pred hcCCCCcCccccCCceeEEEEEeC----CCcEEEEEEccccCCC-ChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCC
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT----DGTLVAIRSLKMSKKS-SPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~ 553 (769)
.++|...+.||+|+||.||+|++. .+..||||.++..... ..+.+.+|+.++++++|||||++++++.+.
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~----- 463 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN----- 463 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC-----
Confidence 456888899999999999999864 2567999998754221 236789999999999999999999998532
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..++||||+++|+|.+++......+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 464 ---~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~ 537 (656)
T 2j0j_A 464 ---PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGL 537 (656)
T ss_dssp ---SCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCC
T ss_pred ---ceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCC
Confidence 26999999999999999986555799999999999999999999999 999999999999999999999999999
Q ss_pred chhhhccCCc---ceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhcccccccccc
Q 004195 634 PLLAEARGKG---SAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTDEARKS 709 (769)
Q Consensus 634 a~~~~~~~~~---~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (769)
++........ ....+..|++||.+....++.++|||||||++|||++ |++||...........+....
T Consensus 538 a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~-------- 609 (656)
T 2j0j_A 538 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-------- 609 (656)
T ss_dssp CCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTC--------
T ss_pred CeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC--------
Confidence 9765432211 1122345888999988899999999999999999997 999987654333222221110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 710 IVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 710 ~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.+.....+++ .+.+++.+||+.||++|||+.|+++.+..+.+.
T Consensus 610 --~~~~~~~~~~----~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 610 --RLPMPPNCPP----TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp --CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCCCccccH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 1112223344 488999999999999999999999999876543
No 248
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.7e-38 Score=347.72 Aligned_cols=251 Identities=15% Similarity=0.214 Sum_probs=189.1
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCCCcceE
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
.+|...+.||+|+||+||.....+|+.||||++... ....+.+|+++++++ +|||||++++++.+.. ..
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~-------~~ 93 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPE---CFSFADREVQLLRESDEHPNVIRYFCTEKDRQ-------FQ 93 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTT---TEEECHHHHHHHHHSCCCTTBCCEEEEEEETT-------EE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCC-------EE
Confidence 457788999999999976555567999999999643 234567899999999 7999999999987643 48
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCC-----CceeeecCCCC
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDE-----NFHVKINSYNL 633 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~-----~~~~kl~DFGl 633 (769)
++|||||+ |+|.+++........+..+..++.||++||+|||+. +|+||||||+|||++. ...+||+|||+
T Consensus 94 ~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~ 169 (432)
T 3p23_A 94 YIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGL 169 (432)
T ss_dssp EEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTE
T ss_pred EEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccc
Confidence 99999996 699999986654566667789999999999999999 9999999999999943 33578999999
Q ss_pred chhhhccC-----CcceeecCCCcchhhhc---cCCCCCCCCeeehhHHHHHHHh-CCCCCCCchhHHHHhhhhhccccc
Q 004195 634 PLLAEARG-----KGSAEVSSPAKKTSVLA---RTEQDDKSDVYDIGIILIEIIV-GRPITSENVVVLVKDLLQVNIGTD 704 (769)
Q Consensus 634 a~~~~~~~-----~~~~~~~~~~~~pe~~~---~~~~~~ksDVwS~Gvil~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 704 (769)
++...... .....++..|++||.+. ...++.++|||||||++|||+| |++||............. ...
T Consensus 170 a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~-~~~-- 246 (432)
T 3p23_A 170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLG-ACS-- 246 (432)
T ss_dssp EECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTT-CCC--
T ss_pred eeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhc-cCC--
Confidence 97654321 12233566788899886 4567889999999999999999 889986544332222111 000
Q ss_pred cccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 705 EARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 705 ~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.... .........+.+++.+||+.||++|||++||++|+||..
T Consensus 247 ---~~~~------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~ 289 (432)
T 3p23_A 247 ---LDCL------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS 289 (432)
T ss_dssp ---CTTS------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred ---cccc------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence 0000 111233455789999999999999999999999999853
No 249
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=328.24 Aligned_cols=254 Identities=16% Similarity=0.254 Sum_probs=180.5
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCC-h-hHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSS-P-HMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~-~-~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.++|+..+.||+|+||.||+|+.. +|+.||||++....... . +.+..+..+++.++||||+++++++.+.+
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~------ 97 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT------ 97 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS------
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC------
Confidence 356788899999999999999976 79999999997543221 1 23344455678889999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhccccc-CCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHT-GIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
..++||||+ ++.+..+.......+++..+..++.|+++||+|||+ . +|+||||||+||+++.++.+||+|||++
T Consensus 98 -~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 172 (318)
T 2dyl_A 98 -DVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGIS 172 (318)
T ss_dssp -EEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred -cEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCc
Confidence 489999999 556666655434478999999999999999999998 5 8999999999999999999999999998
Q ss_pred hhhhccC-CcceeecCCCcchhhhc-----cCCCCCCCCeeehhHHHHHHHhCCCCCCCch--hHHHHhhhhhccccccc
Q 004195 635 LLAEARG-KGSAEVSSPAKKTSVLA-----RTEQDDKSDVYDIGIILIEIIVGRPITSENV--VVLVKDLLQVNIGTDEA 706 (769)
Q Consensus 635 ~~~~~~~-~~~~~~~~~~~~pe~~~-----~~~~~~ksDVwS~Gvil~elltG~~p~~~~~--~~~~~~~~~~~~~~~~~ 706 (769)
....... .....++..|.+||.+. ...++.++|||||||++|||+||+.||.... ........... ..
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~---~~- 248 (318)
T 2dyl_A 173 GRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE---PP- 248 (318)
T ss_dssp --------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSC---CC-
T ss_pred hhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccC---CC-
Confidence 6553322 22234556778899873 4568999999999999999999999997532 12222211110 00
Q ss_pred cccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhh
Q 004195 707 RKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFAT 756 (769)
Q Consensus 707 ~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~ 756 (769)
.. + ....+++ .+.+++.+||+.||++||+++|+++|+|+..
T Consensus 249 --~~--~-~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 289 (318)
T 2dyl_A 249 --LL--P-GHMGFSG----DFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289 (318)
T ss_dssp --CC--C-SSSCCCH----HHHHHHHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred --CC--C-ccCCCCH----HHHHHHHHHccCChhHCcCHHHHhhCHHHHh
Confidence 00 0 0112334 3889999999999999999999999999864
No 250
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=7.3e-37 Score=320.25 Aligned_cols=231 Identities=14% Similarity=0.077 Sum_probs=181.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCCCh---hHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKSSP---HMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~---~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 555 (769)
++|...+.||+|+||.||+|+.. +|+.||||++........ +.+.+|+.++++++||||+++++++.+.+
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~------ 104 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA------ 104 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT------
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC------
Confidence 56888999999999999999976 589999999986543332 67899999999999999999999998643
Q ss_pred ceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 556 SIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..|+||||+++++|.+++... ....+..+|+.|+++||+|||+. +|+||||||+|||++.++.+||+++|..
T Consensus 105 -~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~~- 176 (286)
T 3uqc_A 105 -GGLVVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPATM- 176 (286)
T ss_dssp -EEEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCCC-
T ss_pred -cEEEEEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecccc-
Confidence 389999999999999999643 34557888999999999999999 9999999999999999999999966532
Q ss_pred hhhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCc-c
Q 004195 636 LAEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDP-A 714 (769)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~ 714 (769)
..++.++|||||||++|||+||+.||................. .....+ .
T Consensus 177 ------------------------~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~-----~~~~~~~~ 227 (286)
T 3uqc_A 177 ------------------------PDANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTA-----GQPIEPAD 227 (286)
T ss_dssp ------------------------TTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTT-----SCBCCHHH
T ss_pred ------------------------CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhc-----cCCCChhh
Confidence 1368899999999999999999999975432110000000000 000000 1
Q ss_pred ccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhhh
Q 004195 715 VMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQI 758 (769)
Q Consensus 715 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~~ 758 (769)
.....++ .+.+++.+||+.||++| |+.|+++.+..+...
T Consensus 228 ~~~~~~~----~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 228 IDRDIPF----QISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp HCTTSCH----HHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred cccCCCH----HHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 1123333 48899999999999999 999999999876543
No 251
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.3e-36 Score=357.78 Aligned_cols=255 Identities=31% Similarity=0.461 Sum_probs=180.1
Q ss_pred CCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEe
Q 004195 111 LSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190 (769)
Q Consensus 111 l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 190 (769)
+++|+.|+|++|.+++.+|..|+++++|++|+|++|++++.+|..|+++++|++|+|++|++++.+|..|+.+++|++|+
T Consensus 393 ~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 472 (768)
T 3rgz_A 393 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 472 (768)
T ss_dssp TCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEE
T ss_pred cCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEE
Confidence 45566666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred ccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCccc---ccCCcEEEeCCccccC
Q 004195 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRL---HKKMVTLVLRNNRFQF 266 (769)
Q Consensus 191 L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~---~~~L~~L~l~~N~~~~ 266 (769)
|++|++++.+|..++++++|++|+|++|++++.+|. ++.+++|++|++++|.++|.+|.. +++|+.|++++|.++|
T Consensus 473 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 552 (768)
T 3rgz_A 473 LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNG 552 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEES
T ss_pred ecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCC
Confidence 666666666666666666666666666666666554 566666666666666666666643 3456666666666665
Q ss_pred CcCch----------------------------------------------------------------------hhcCC
Q 004195 267 GLNPD----------------------------------------------------------------------ELRSY 276 (769)
Q Consensus 267 ~i~p~----------------------------------------------------------------------~~~~l 276 (769)
.+ |. .+..+
T Consensus 553 ~i-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l 631 (768)
T 3rgz_A 553 TI-PAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNN 631 (768)
T ss_dssp BC-CGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSS
T ss_pred cC-ChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhcc
Confidence 54 33 23345
Q ss_pred CcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEEC
Q 004195 277 NQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLY 356 (769)
Q Consensus 277 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l 356 (769)
++|++|||++|+++|.+|..++++++|+.|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..+..++.++.+++
T Consensus 632 ~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~l 711 (768)
T 3rgz_A 632 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 711 (768)
T ss_dssp BCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEEC
T ss_pred ccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEEC
Confidence 67888888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCCCCChhhh
Q 004195 357 SKNCLSNEEQ 366 (769)
Q Consensus 357 ~~N~l~~~~~ 366 (769)
++|.++|.+|
T Consensus 712 s~N~l~g~iP 721 (768)
T 3rgz_A 712 SNNNLSGPIP 721 (768)
T ss_dssp CSSEEEEECC
T ss_pred cCCcccccCC
Confidence 8888887654
No 252
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.3e-37 Score=353.30 Aligned_cols=272 Identities=14% Similarity=0.091 Sum_probs=202.1
Q ss_pred cCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcce
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSISI 557 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 557 (769)
++|...+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++...... .....
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~-~~~~~ 92 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKL-APNDL 92 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCC-CTTSS
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccc-cCCCe
Confidence 67999999999999999999975 699999999875421 2245688999999999999999999998652221 11344
Q ss_pred EEEEEeccCCCchhhhhcCCC--CCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCce---eeecCCC
Q 004195 558 IYLIFEYAPNETLRSFISGPG--YKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFH---VKINSYN 632 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~---~kl~DFG 632 (769)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 799999999999999998432 3589999999999999999999998 9999999999999987664 9999999
Q ss_pred CchhhhccCC-cceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhcc-------ccc
Q 004195 633 LPLLAEARGK-GSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNI-------GTD 704 (769)
Q Consensus 633 la~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~-------~~~ 704 (769)
+++....... ....++..|.+||.+.+..++.++|||||||++|||+||+.||....... .+..... ...
T Consensus 170 ~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~--~~~~~i~~~~~~~~~~~ 247 (676)
T 3qa8_A 170 YAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV--QWHGKVREKSNEHIVVY 247 (676)
T ss_dssp CCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHH--HSSTTCC------CCSC
T ss_pred cccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchh--hhhhhhhcccchhhhhh
Confidence 9976544332 22344567788999888899999999999999999999999987542211 1100000 000
Q ss_pred cccccc--c--CccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 705 EARKSI--V--DPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 705 ~~~~~~--~--d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
...... + ...............+.+++.+||+.||++|||+.|+++|+||..-
T Consensus 248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l 304 (676)
T 3qa8_A 248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQAL 304 (676)
T ss_dssp CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHH
T ss_pred hhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHH
Confidence 000000 0 0011123344566779999999999999999999999999998753
No 253
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.1e-36 Score=333.78 Aligned_cols=254 Identities=12% Similarity=0.094 Sum_probs=187.4
Q ss_pred hcCCCCcCccccCCceeEEEEEeC-CCcEEEEEEccccCCC---ChhHHHHHHHHHhhccC-CceeeEe---------ee
Q 004195 479 TDCFDSSSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKKS---SPHMYTYHIELISKLRH-SNLVSAL---------GH 544 (769)
Q Consensus 479 t~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~---~~~~~~~Ei~~l~~l~H-~nIv~l~---------~~ 544 (769)
+..|...+.||+|+||+||+|++. +|+.||||+++..... ..+.+.+|+.+++.++| +|..... +.
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 345667789999999999999965 7999999999844322 24679999999999987 3221111 11
Q ss_pred eeccCC----------CCCCcceEEEEEeccCCCchhhhhc------CCCCCCCHHHHHHHHHHHHHHhcccccCCCCCc
Q 004195 545 CLDFSL----------DDPSISIIYLIFEYAPNETLRSFIS------GPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGV 608 (769)
Q Consensus 545 ~~~~~~----------~~~~~~~~~lV~Ey~~~gsL~~~l~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 608 (769)
+..... ........+++|+++ +++|.+++. .....++|..+..++.|+++||+|||+. +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 110000 000122367788876 589999884 3344688999999999999999999999 99
Q ss_pred cccCccccceeeCCCceeeecCCCCchhhhccCCcceeecCCCcchhhh----------ccCCCCCCCCeeehhHHHHHH
Q 004195 609 FSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAKKTSVL----------ARTEQDDKSDVYDIGIILIEI 678 (769)
Q Consensus 609 vHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~----------~~~~~~~ksDVwS~Gvil~el 678 (769)
+||||||+|||++.++.+||+|||+++...... ....+ ..|++||.+ ....++.++|||||||++|||
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~-~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~el 310 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASA-VSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWI 310 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEEE-CCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCcc-ccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHH
Confidence 999999999999999999999999987654442 22333 778889988 555688899999999999999
Q ss_pred HhCCCCCCCchhHHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhhhh
Q 004195 679 IVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFATQ 757 (769)
Q Consensus 679 ltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~~~ 757 (769)
+||+.||.......... .++.. ...+++ .+.+++.+||+.||++||++.|+++|+||..-
T Consensus 311 ltg~~Pf~~~~~~~~~~-------------~~~~~--~~~~~~----~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~ 370 (413)
T 3dzo_A 311 WCADLPNTDDAALGGSE-------------WIFRS--CKNIPQ----PVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 370 (413)
T ss_dssp HHSSCCCCTTGGGSCSG-------------GGGSS--CCCCCH----HHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHCCCCCCCcchhhhHH-------------HHHhh--cccCCH----HHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence 99999997543211110 01110 012333 48899999999999999999999999998654
No 254
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2e-35 Score=346.97 Aligned_cols=243 Identities=16% Similarity=0.256 Sum_probs=190.2
Q ss_pred cCCCCcCccccCCceeEEEEEeC--CCcEEEEEEccccCC-CChhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCCcc
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLT--DGTLVAIRSLKMSKK-SSPHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~--~g~~vAvK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
++|...+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|++++++++|||||+++++|.+.+.. ...
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~--~~~ 157 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRH--GDP 157 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTT--SCE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCC--CCc
Confidence 67889999999999999999975 689999999875322 2235688999999999999999999999864431 123
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..|+||||+++++|.+++.. .++|.+++.|+.||++||+|||+. +|+||||||+|||++.+ .+||+|||+++.
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred eeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchh
Confidence 36999999999999998765 589999999999999999999999 99999999999999885 899999999976
Q ss_pred hhccCCcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCCCCCCCchhHHHHhhhhhccccccccccccCcccc
Q 004195 637 AEARGKGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGRPITSENVVVLVKDLLQVNIGTDEARKSIVDPAVM 716 (769)
Q Consensus 637 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 716 (769)
.... ....++..|++||.+.+. ++.++|||||||++|||++|.+|+....... .. .
T Consensus 231 ~~~~--~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~--------~~---------~---- 286 (681)
T 2pzi_A 231 INSF--GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG--------LP---------E---- 286 (681)
T ss_dssp TTCC--SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS--------CC---------T----
T ss_pred cccC--CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc--------cc---------c----
Confidence 5433 333456678889987654 5899999999999999999998876421100 00 0
Q ss_pred CCCCHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHhHhh
Q 004195 717 NECSDESLKRMMELCLRCLSNEPKDRPSVEDTLWNLQFA 755 (769)
Q Consensus 717 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~l~~~ 755 (769)
..........+.+++.+||+.||++||+..+.+.+.++.
T Consensus 287 ~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 287 DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 000012234588999999999999999877777776653
No 255
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1e-35 Score=319.66 Aligned_cols=252 Identities=12% Similarity=0.088 Sum_probs=187.1
Q ss_pred cCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCC--------CChhHHHHHHHHHhhcc---------CCceeeEe
Q 004195 480 DCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKK--------SSPHMYTYHIELISKLR---------HSNLVSAL 542 (769)
Q Consensus 480 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~--------~~~~~~~~Ei~~l~~l~---------H~nIv~l~ 542 (769)
++|...+.||+|+||+||+|+. +|+.||||+++.... ...+.+.+|++++++++ |||||++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4577889999999999999998 689999999986532 12367899999999986 77777776
Q ss_pred eeeeccCCC-----------------------CCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcc
Q 004195 543 GHCLDFSLD-----------------------DPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQF 599 (769)
Q Consensus 543 ~~~~~~~~~-----------------------~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~y 599 (769)
+++...... .......++|||||++|++.+.+.+ ..+++..+..|+.||+.||+|
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHH
Confidence 654311000 0013458999999999987776654 358999999999999999999
Q ss_pred cc-cCCCCCccccCccccceeeCCCc--------------------eeeecCCCCchhhhccCCcceeecCCCcchhhhc
Q 004195 600 LH-TGIVPGVFSNNLKITDVLLDENF--------------------HVKINSYNLPLLAEARGKGSAEVSSPAKKTSVLA 658 (769)
Q Consensus 600 LH-~~~~~~ivHrDlKp~NILld~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~pe~~~ 658 (769)
|| +. +|+||||||+|||++.++ .+||+|||+|+.... ....++..|++||.+.
T Consensus 177 lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~---~~~~gt~~y~aPE~~~ 250 (336)
T 2vuw_A 177 AEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD---GIVVFCDVSMDEDLFT 250 (336)
T ss_dssp HHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET---TEEECCCCTTCSGGGC
T ss_pred HHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC---CcEEEeecccChhhhc
Confidence 99 88 999999999999999887 899999999976543 2345566788899887
Q ss_pred cCCCCCCCCeeehhHH-HHHHHhCCCCCCCchh--HHHHhhhhhccccccccccccCccccCCCCHHHHHHHHHHHHHcC
Q 004195 659 RTEQDDKSDVYDIGII-LIEIIVGRPITSENVV--VLVKDLLQVNIGTDEARKSIVDPAVMNECSDESLKRMMELCLRCL 735 (769)
Q Consensus 659 ~~~~~~ksDVwS~Gvi-l~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~li~~cl 735 (769)
+.. +.++||||+|++ .+++++|..||..... ......... .. ..........+....++.+|+.+||
T Consensus 251 g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 251 GDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQ-MT--------FKTKCNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp CCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHT-CC--------CSSCCCSHHHHHHHHHHHHHHHHGG
T ss_pred CCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhh-hc--------cCcccchhhhhhcCHHHHHHHHHHh
Confidence 555 889999998777 7789999999853210 011111100 00 0011111123456778999999999
Q ss_pred cCCCCCCCCHHHHH-HHhHhh
Q 004195 736 SNEPKDRPSVEDTL-WNLQFA 755 (769)
Q Consensus 736 ~~dP~~RPs~~evl-~~l~~~ 755 (769)
+.| |++|++ +|+||.
T Consensus 321 ~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 321 NFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp GSS-----SHHHHHHHCGGGC
T ss_pred ccC-----CHHHHHhcCCCcC
Confidence 976 999999 999973
No 256
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.9e-33 Score=314.99 Aligned_cols=268 Identities=19% Similarity=0.198 Sum_probs=196.9
Q ss_pred CCCCCCCccccccCCCCCCcEEEeecccccCCC-CccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCc
Q 004195 96 AHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPL-PGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTG 174 (769)
Q Consensus 96 ~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~ 174 (769)
++|.+.+..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++
T Consensus 38 s~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 117 (455)
T 3v47_A 38 SLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDG 117 (455)
T ss_dssp CSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBT
T ss_pred cCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCc
Confidence 334444445666777777777777777776554 4567777777777777777777777777777777777777777776
Q ss_pred cCCcc--CcCCcCCCEEeccCCCCcccCCcc-ccCCCCCCEEEccCccccccCCC-CC----------------------
Q 004195 175 AVPSE--LSLLQVLSVLSLKNNSLSGFLPVS-LTGLQSLRVVSLSANHLSGEIPD-LR---------------------- 228 (769)
Q Consensus 175 ~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~ls~N~l~~~~p~-l~---------------------- 228 (769)
.+|.. |..+++|++|+|++|++++..|.. +.++++|++|++++|++++..+. +.
T Consensus 118 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~ 197 (455)
T 3v47_A 118 AVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNE 197 (455)
T ss_dssp HHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCST
T ss_pred cccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccch
Confidence 55544 777777777777777777766665 67777777777777777765553 22
Q ss_pred ------------CCccCcEEeccCCcCCCCCccc------------------------------------------ccCC
Q 004195 229 ------------NLKNLRVFDVQDNYFGPRFPRL------------------------------------------HKKM 254 (769)
Q Consensus 229 ------------~l~~L~~l~l~~N~l~~~~p~~------------------------------------------~~~L 254 (769)
.+++|+.|++++|.+++..|.. ..+|
T Consensus 198 ~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 277 (455)
T 3v47_A 198 YWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGV 277 (455)
T ss_dssp TCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCC
T ss_pred hhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCc
Confidence 3356777888877775433321 1367
Q ss_pred cEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccC
Q 004195 255 VTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSS 334 (769)
Q Consensus 255 ~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~ 334 (769)
+.|++++|.+++.+ |..+..+++|++|+|++|++.+..|..|.++++|+.|+|++|++++..+..+..+++|+.|+|++
T Consensus 278 ~~L~l~~n~l~~~~-~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 356 (455)
T 3v47_A 278 KTCDLSKSKIFALL-KSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSY 356 (455)
T ss_dssp CEEECCSSCCCEEC-TTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCS
T ss_pred eEEEecCccccccc-hhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCC
Confidence 77888888877554 77788888888888888888887777888888888888888888887788888888888888888
Q ss_pred CcCCCCCCccccccCCCceEECCCCCCChh
Q 004195 335 NLLTGYLPSCLQVEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 335 N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 364 (769)
|++++..|..+..+++++.+++++|.+++.
T Consensus 357 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 386 (455)
T 3v47_A 357 NHIRALGDQSFLGLPNLKELALDTNQLKSV 386 (455)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CcccccChhhccccccccEEECCCCccccC
Confidence 888888888888888888888888887653
No 257
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=3.4e-33 Score=298.28 Aligned_cols=275 Identities=18% Similarity=0.178 Sum_probs=172.7
Q ss_pred CCHHHHHHHHHHHHhc-CCCC-CCCCCC----CCCCCCCCCCCCCCCcceEecCCCeeEEEeCCCCCCCCCCCCCCCCCC
Q 004195 28 LQLFQYQTLVRIQQLL-NYPS-VSSSFN----TTTVTDFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFST 101 (769)
Q Consensus 28 ~~~~~~~~ll~~k~~~-~~~~-~l~~w~----~~~~~~~c~~~~~~~~~v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~ 101 (769)
+..+|++||++||..+ .++. .+.+|. ... ++|.|. |+.|..-. . .+
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~--~~~~~~-----g~~~~~~~--~-------------~l------ 75 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNP--QIETRT-----GRALKATA--D-------------LL------ 75 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCT--TSCCSH-----HHHHHHHH--H-------------HH------
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccc--cccccC-----CcchhhhH--H-------------HH------
Confidence 4467899999999987 4553 456783 233 789987 47774200 0 00
Q ss_pred CccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCc
Q 004195 102 DTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELS 181 (769)
Q Consensus 102 ~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 181 (769)
.-...++++.|+|++|+++ .+|..++++++|++|+|++|.++ .+|..|+++++|++|+|++|+++ .+|..|+
T Consensus 76 -----~~~~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~ 147 (328)
T 4fcg_A 76 -----EDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIA 147 (328)
T ss_dssp -----HHHTSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGG
T ss_pred -----hcccccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHh
Confidence 0011344556666666664 45555666666666666666666 56666666666666666666665 5566666
Q ss_pred CCcCCCEEeccCCCCcccCCccccC---------CCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCccccc
Q 004195 182 LLQVLSVLSLKNNSLSGFLPVSLTG---------LQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHK 252 (769)
Q Consensus 182 ~l~~L~~L~L~~N~l~~~~p~~l~~---------l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~ 252 (769)
++++|++|+|++|++.+.+|..++. +++|++|+|++|+++..+..++.+++|+.|++++|.+++
T Consensus 148 ~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~------- 220 (328)
T 4fcg_A 148 SLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSA------- 220 (328)
T ss_dssp GCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCC-------
T ss_pred cCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCc-------
Confidence 6666666666666666566655443 677777777777776333336666666666666655542
Q ss_pred CCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEc
Q 004195 253 KMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDL 332 (769)
Q Consensus 253 ~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 332 (769)
+ |..+..+++|++|+|++|++.+.+|..+.++++|+.|+|++|++.+.+|..+..+++|+.|+|
T Consensus 221 ---------------l-~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L 284 (328)
T 4fcg_A 221 ---------------L-GPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDL 284 (328)
T ss_dssp ---------------C-CGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEEC
T ss_pred ---------------C-chhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeC
Confidence 2 445666667777777777777767777777777777777777777777776777777777777
Q ss_pred cCCcCCCCCCccccccCCCceEECCCCCC
Q 004195 333 SSNLLTGYLPSCLQVEAKTRLVLYSKNCL 361 (769)
Q Consensus 333 ~~N~l~g~~p~~~~~~~~l~~l~l~~N~l 361 (769)
++|++.+.+|..+..+++++.+.+..|.+
T Consensus 285 ~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 285 RGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp TTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred CCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 77777777777777777777776665543
No 258
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2e-32 Score=306.78 Aligned_cols=288 Identities=18% Similarity=0.208 Sum_probs=249.1
Q ss_pred CCeeEEEeCCCCCCCCC------------CCCCCCCCCCcc-ccccCCCCCCcEEEeecccccCCCCccccCCCcCceee
Q 004195 76 DNLTQLHIAGDNNNNIN------------GGLAHNFSTDTF-FSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILN 142 (769)
Q Consensus 76 ~~v~~l~l~~~~~~~~~------------~~l~~n~~~~~~-~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~ 142 (769)
.+++.|+++++.+.... .++++|.+.+.+ +..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 35899999988665431 234456555444 56799999999999999999999999999999999999
Q ss_pred ccCcccCCcCCcc--ccCCCcCCEEEcccCcCCccCCcc-CcCCcCCCEEeccCCCCcccCCccccCC------------
Q 004195 143 LSSNYLSGSIPVQ--ISSLRNLQTLILDDNKFTGAVPSE-LSLLQVLSVLSLKNNSLSGFLPVSLTGL------------ 207 (769)
Q Consensus 143 Ls~N~l~g~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l------------ 207 (769)
|++|++++.+|.. |+++++|++|+|++|++++..|.. |.++++|++|+|++|.+++..|..+.++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999999866665 999999999999999999888877 8999999999999999999888776554
Q ss_pred ----------------------CCCCEEEccCccccccCCC--------------------------------------C
Q 004195 208 ----------------------QSLRVVSLSANHLSGEIPD--------------------------------------L 227 (769)
Q Consensus 208 ----------------------~~L~~L~ls~N~l~~~~p~--------------------------------------l 227 (769)
++|+.|++++|++++.+|. +
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 6899999999988764331 0
Q ss_pred C--CCccCcEEeccCCcCCCCCccc---ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCC
Q 004195 228 R--NLKNLRVFDVQDNYFGPRFPRL---HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPS 302 (769)
Q Consensus 228 ~--~l~~L~~l~l~~N~l~~~~p~~---~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 302 (769)
. ..++|+.|++++|.+.+..|.. +++|+.|+|++|.+++.. |..+..+++|++|+|++|.+.+..|..|.++++
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 348 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKID-DNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDK 348 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEEC-TTTTTTCTTCCEEECCSSCCCEECGGGGTTCTT
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccC-hhHhcCcccCCEEECCCCccCCcChhHhcCccc
Confidence 0 1258999999999999877764 578999999999999654 889999999999999999999988899999999
Q ss_pred CCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCChh
Q 004195 303 ITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 303 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 364 (769)
|+.|+|++|++++..|..+..+++|+.|+|++|++++..+..+..+++++.+++++|.+++.
T Consensus 349 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 349 LEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 410 (455)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccC
Confidence 99999999999999999999999999999999999988888888999999999999998765
No 259
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.98 E-value=1.3e-31 Score=301.94 Aligned_cols=286 Identities=19% Similarity=0.173 Sum_probs=204.3
Q ss_pred CeeEEEeCCCCCCCCC------------CCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeecc
Q 004195 77 NLTQLHIAGDNNNNIN------------GGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLS 144 (769)
Q Consensus 77 ~v~~l~l~~~~~~~~~------------~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls 144 (769)
+++.|+++++.+.... .++++|.+.+..|..|.++++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 112 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDIS 112 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECT
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECC
Confidence 4666666666543321 1234455555555666666666666666666655544556666666666666
Q ss_pred CcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccC
Q 004195 145 SNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEI 224 (769)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~ 224 (769)
+|++++..|..|.++++|++|+|++|.+++..|..|.++++|+.|+|++|.+++..+..|.++++|+.|+|++|.+++..
T Consensus 113 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~ 192 (477)
T 2id5_A 113 ENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIR 192 (477)
T ss_dssp TSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEEC
T ss_pred CCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeC
Confidence 66666666666666666666666666666666666666666666666666666555555666666666666666666654
Q ss_pred C-CCCCCccCcEEeccCCcCCCCCccc---ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCC
Q 004195 225 P-DLRNLKNLRVFDVQDNYFGPRFPRL---HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSL 300 (769)
Q Consensus 225 p-~l~~l~~L~~l~l~~N~l~~~~p~~---~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 300 (769)
+ .+..+++|+.|++++|.+.+.+|.. ..+|+.|+|++|.++. +++..+..+++|++|+|++|.+++..+..|..+
T Consensus 193 ~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 271 (477)
T 2id5_A 193 DYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTA-VPYLAVRHLVYLRFLNLSYNPISTIEGSMLHEL 271 (477)
T ss_dssp TTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCS-CCHHHHTTCTTCCEEECCSSCCCEECTTSCTTC
T ss_pred hhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccc-cCHHHhcCccccCeeECCCCcCCccChhhcccc
Confidence 4 3666777777777777666555543 2378888999998884 535678889999999999999998878888999
Q ss_pred CCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 301 PSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 301 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++++.+++++|.+..
T Consensus 272 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 272 LRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp TTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred ccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 999999999999999888899999999999999999998888888888889999999997754
No 260
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.97 E-value=9.7e-32 Score=313.05 Aligned_cols=260 Identities=16% Similarity=0.220 Sum_probs=231.2
Q ss_pred CCCCCccccccCCCCCCcEEEeecccccCC-----------------CCcccc--CCCcCceeeccCcccCCcCCccccC
Q 004195 98 NFSTDTFFSTLGSLSSLKVLSLVSLGLWGP-----------------LPGSIA--HSSSLEILNLSSNYLSGSIPVQISS 158 (769)
Q Consensus 98 n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~-----------------~p~~~~--~l~~L~~L~Ls~N~l~g~~p~~~~~ 158 (769)
|.+++ +|..++++++|++|+|++|.++|. +|..++ ++++|++|+|++|++.|.+|..|++
T Consensus 193 n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 271 (636)
T 4eco_A 193 NNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKA 271 (636)
T ss_dssp CEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTT
T ss_pred CCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhc
Confidence 44555 899999999999999999999996 999999 9999999999999999999999999
Q ss_pred CCcCCEEEcccCc-CCc-cCCccCcCC------cCCCEEeccCCCCcccCCc--cccCCCCCCEEEccCccccccCCCCC
Q 004195 159 LRNLQTLILDDNK-FTG-AVPSELSLL------QVLSVLSLKNNSLSGFLPV--SLTGLQSLRVVSLSANHLSGEIPDLR 228 (769)
Q Consensus 159 l~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~ls~N~l~~~~p~l~ 228 (769)
+++|++|+|++|+ ++| .+|..++++ ++|++|+|++|+++ .+|. .++++++|++|++++|+++|.+|.++
T Consensus 272 l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~ 350 (636)
T 4eco_A 272 LPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFG 350 (636)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCE
T ss_pred CCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhC
Confidence 9999999999998 999 899999887 99999999999999 8898 99999999999999999999999999
Q ss_pred CCccCcEEeccCCcCCCCCccc---ccC-CcEEEeCCccccCCcCchhhcCCC--cCcEEeccCccccccCCccCC----
Q 004195 229 NLKNLRVFDVQDNYFGPRFPRL---HKK-MVTLVLRNNRFQFGLNPDELRSYN--QLQKLDISLNRFVGPFIPSLL---- 298 (769)
Q Consensus 229 ~l~~L~~l~l~~N~l~~~~p~~---~~~-L~~L~l~~N~~~~~i~p~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~---- 298 (769)
.+++|+.|++++|.++ .+|.. +.+ |+.|++++|.++ .+ |..+..++ +|++|++++|.+++.+|..+.
T Consensus 351 ~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~l-p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~ 427 (636)
T 4eco_A 351 SEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YI-PNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDP 427 (636)
T ss_dssp EEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SC-CSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCS
T ss_pred CCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-cc-chhhhhcccCccCEEECcCCcCCCcchhhhccccc
Confidence 9999999999999998 56553 456 999999999999 66 77777655 899999999999999998888
Q ss_pred ---CCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccc-c-------CCCceEECCCCCCCh
Q 004195 299 ---SLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQV-E-------AKTRLVLYSKNCLSN 363 (769)
Q Consensus 299 ---~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~-~-------~~l~~l~l~~N~l~~ 363 (769)
.+++|+.|+|++|++++..+..+..+++|+.|+|++|+++ .+|..... . ++++.+++++|.++.
T Consensus 428 ~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 502 (636)
T 4eco_A 428 TPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLTK 502 (636)
T ss_dssp SCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCCB
T ss_pred ccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCCc
Confidence 8889999999999999755556667899999999999999 56654433 2 278999999998873
No 261
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.97 E-value=1e-30 Score=294.69 Aligned_cols=294 Identities=18% Similarity=0.131 Sum_probs=255.5
Q ss_pred ceEecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccC
Q 004195 70 TLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLS 149 (769)
Q Consensus 70 ~v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 149 (769)
.|.|...+++.+.- +........++++|.+.+..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+++
T Consensus 15 ~v~c~~~~l~~ip~-~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~ 93 (477)
T 2id5_A 15 AVLCHRKRFVAVPE-GIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK 93 (477)
T ss_dssp EEECCSCCCSSCCS-CCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred EEEeCCCCcCcCCC-CCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCC
Confidence 57777666655431 11111112467778888888889999999999999999999999999999999999999999999
Q ss_pred CcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CC
Q 004195 150 GSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LR 228 (769)
Q Consensus 150 g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~ 228 (769)
+..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|+.|+|++|++++..+. +.
T Consensus 94 ~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~ 173 (477)
T 2id5_A 94 LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALS 173 (477)
T ss_dssp SCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHT
T ss_pred ccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhc
Confidence 76667789999999999999999999999999999999999999999999999999999999999999999876654 88
Q ss_pred CCccCcEEeccCCcCCCCCccc---ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCE
Q 004195 229 NLKNLRVFDVQDNYFGPRFPRL---HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITY 305 (769)
Q Consensus 229 ~l~~L~~l~l~~N~l~~~~p~~---~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 305 (769)
.+++|+.|++++|.+.+..+.. +.+|+.|++++|.+.+.+ |.......+|++|+|++|++++..+..+.++++|+.
T Consensus 174 ~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~-~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 252 (477)
T 2id5_A 174 HLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTM-TPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRF 252 (477)
T ss_dssp TCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEE-CTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCE
T ss_pred ccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCcccccc-CcccccCccccEEECcCCcccccCHHHhcCccccCe
Confidence 9999999999999998765543 568999999999988777 555556669999999999999765567899999999
Q ss_pred EEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCChhh
Q 004195 306 LDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEE 365 (769)
Q Consensus 306 L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~~ 365 (769)
|+|++|++++..+..+..+++|+.|+|++|++++..|..+..+++|+.+++++|.+++..
T Consensus 253 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 312 (477)
T 2id5_A 253 LNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLE 312 (477)
T ss_dssp EECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCC
T ss_pred eECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeC
Confidence 999999999998999999999999999999999999999999999999999999987643
No 262
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=1.5e-31 Score=283.68 Aligned_cols=231 Identities=28% Similarity=0.359 Sum_probs=209.4
Q ss_pred CCCcEEEeecccccC--CCCccccCCCcCceeeccC-cccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCE
Q 004195 112 SSLKVLSLVSLGLWG--PLPGSIAHSSSLEILNLSS-NYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSV 188 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g--~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 188 (769)
.+++.|+|++|+++| .+|..|+++++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 578999999999999 8999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EeccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCc-cCcEEeccCCcCCCCCcccccCCcEEEeCCccccC
Q 004195 189 LSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLK-NLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQF 266 (769)
Q Consensus 189 L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~-~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~ 266 (769)
|+|++|.+++.+|..|.++++|++|+|++|++++.+|. +..++ +|+.|++++|.+ ++
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l---------------------~~ 188 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL---------------------TG 188 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEE---------------------EE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCee---------------------ec
Confidence 99999999999999999999999999999999988774 66665 666665555544 44
Q ss_pred CcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCcccc
Q 004195 267 GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQ 346 (769)
Q Consensus 267 ~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~ 346 (769)
.+ |..+..++ |++|+|++|.+++.+|..+..+++|+.|+|++|++++.+|. +..+++|+.|+|++|++++.+|..+.
T Consensus 189 ~~-~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~ 265 (313)
T 1ogq_A 189 KI-PPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLT 265 (313)
T ss_dssp EC-CGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGG
T ss_pred cC-ChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHh
Confidence 44 77777887 99999999999999999999999999999999999987776 78899999999999999999999999
Q ss_pred ccCCCceEECCCCCCChhhh
Q 004195 347 VEAKTRLVLYSKNCLSNEEQ 366 (769)
Q Consensus 347 ~~~~l~~l~l~~N~l~~~~~ 366 (769)
.+++++.+++++|.++|..|
T Consensus 266 ~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 266 QLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp GCTTCCEEECCSSEEEEECC
T ss_pred cCcCCCEEECcCCcccccCC
Confidence 99999999999999987654
No 263
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=1.5e-30 Score=301.19 Aligned_cols=261 Identities=19% Similarity=0.186 Sum_probs=213.0
Q ss_pred CCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccC
Q 004195 97 HNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAV 176 (769)
Q Consensus 97 ~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~ 176 (769)
++.+....+..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..
T Consensus 60 ~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~ 139 (597)
T 3oja_B 60 NSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLP 139 (597)
T ss_dssp SCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCC
Confidence 33333344455778889999999999998888888999999999999999998888888889999999999999988666
Q ss_pred CccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCcc-------------------CcEEe
Q 004195 177 PSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKN-------------------LRVFD 237 (769)
Q Consensus 177 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~-------------------L~~l~ 237 (769)
+..|+++++|++|+|++|.+++..|..|+++++|+.|+|++|.+++.. ++.+++ |+.|+
T Consensus 140 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ 217 (597)
T 3oja_B 140 RGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIPIAVEELD 217 (597)
T ss_dssp TTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTCSEEECCSSCCSEEECCTTCSEEE
T ss_pred HHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC--hhhhhhhhhhhcccCccccccCCchhheee
Confidence 666788999999999999998888888889999999999999887642 333444 45555
Q ss_pred ccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccc
Q 004195 238 VQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLL 317 (769)
Q Consensus 238 l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 317 (769)
+++|.+....+....+|..|+|++|.+++ +..+..+++|+.|+|++|.+.+..|..|.++++|+.|+|++|.+++ +
T Consensus 218 ls~n~l~~~~~~~~~~L~~L~L~~n~l~~---~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l 293 (597)
T 3oja_B 218 ASHNSINVVRGPVNVELTILKLQHNNLTD---TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-L 293 (597)
T ss_dssp CCSSCCCEEECSCCSCCCEEECCSSCCCC---CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-E
T ss_pred ccCCcccccccccCCCCCEEECCCCCCCC---ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-C
Confidence 55555544333445678899999999885 5788999999999999999999889999999999999999999988 4
Q ss_pred cccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCChh
Q 004195 318 LQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 318 ~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 364 (769)
|..+..+++|+.|+|++|.++ .+|..+..+++++.|++++|.+++.
T Consensus 294 ~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~ 339 (597)
T 3oja_B 294 NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL 339 (597)
T ss_dssp ECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC
T ss_pred CcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc
Confidence 666778899999999999998 5777788889999999999998754
No 264
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.97 E-value=2.4e-30 Score=300.78 Aligned_cols=289 Identities=21% Similarity=0.146 Sum_probs=206.3
Q ss_pred CeeEEEeCCCCCCCCC------------CCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeecc
Q 004195 77 NLTQLHIAGDNNNNIN------------GGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLS 144 (769)
Q Consensus 77 ~v~~l~l~~~~~~~~~------------~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls 144 (769)
+++.|+++++.+.... .++++|.+.+..|..|+++++|++|+|++|.+++..|..|+++++|++|+|+
T Consensus 33 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 112 (606)
T 3vq2_A 33 STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAV 112 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECT
T ss_pred CcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEcc
Confidence 5788888887654321 2345566666667778888888888888888888778888888888888888
Q ss_pred CcccCCcCCccccCCCcCCEEEcccCcCCc-cCCccCcCCcCCCEEeccCCCCcccCCcccc------------------
Q 004195 145 SNYLSGSIPVQISSLRNLQTLILDDNKFTG-AVPSELSLLQVLSVLSLKNNSLSGFLPVSLT------------------ 205 (769)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~------------------ 205 (769)
+|.+++..|..|+++++|++|+|++|.+++ .+|..|+++++|++|+|++|++++..|..|+
T Consensus 113 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~ 192 (606)
T 3vq2_A 113 ETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNP 192 (606)
T ss_dssp TSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCC
T ss_pred CCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCC
Confidence 888887666778888888888888888875 5688888888888888888877665443221
Q ss_pred --------------------------------------------------------------------------------
Q 004195 206 -------------------------------------------------------------------------------- 205 (769)
Q Consensus 206 -------------------------------------------------------------------------------- 205 (769)
T Consensus 193 l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~ 272 (606)
T 3vq2_A 193 IDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTN 272 (606)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCT
T ss_pred cceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccc
Confidence
Q ss_pred ---------------------------------------------------------------------------CCCCC
Q 004195 206 ---------------------------------------------------------------------------GLQSL 210 (769)
Q Consensus 206 ---------------------------------------------------------------------------~l~~L 210 (769)
.+++|
T Consensus 273 ~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L 352 (606)
T 3vq2_A 273 DFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSL 352 (606)
T ss_dssp TCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTTC
T ss_pred cccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCCC
Confidence 12233
Q ss_pred CEEEccCccccccC--C-CCCCCccCcEEeccCCcCCCCCcc--cccCCcEEEeCCccccCCcCchhhcCCCcCcEEecc
Q 004195 211 RVVSLSANHLSGEI--P-DLRNLKNLRVFDVQDNYFGPRFPR--LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDIS 285 (769)
Q Consensus 211 ~~L~ls~N~l~~~~--p-~l~~l~~L~~l~l~~N~l~~~~p~--~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls 285 (769)
++|++++|++++.. | .+..+++|+.|++++|.+.+.... .+++|+.|++++|.+.+......+..+++|++|+++
T Consensus 353 ~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~ 432 (606)
T 3vq2_A 353 SYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDIS 432 (606)
T ss_dssp CEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECT
T ss_pred CEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECc
Confidence 33333333333321 1 134556777788888877653322 246778888888888765522577778888888888
Q ss_pred CccccccCCccCCCCCCCCEEEccCCcCCc-cccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCChh
Q 004195 286 LNRFVGPFIPSLLSLPSITYLDIHGNKLTG-LLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 286 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 364 (769)
+|.+.+..|..+.++++|+.|++++|++++ .+|..+..+++|+.|++++|++++.+|..+..+++++.+++++|.+++.
T Consensus 433 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 512 (606)
T 3vq2_A 433 YTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFL 512 (606)
T ss_dssp TSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCE
T ss_pred CCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCc
Confidence 888887777778888888888888888877 4677777788888888888888877777777777888888888877765
Q ss_pred h
Q 004195 365 E 365 (769)
Q Consensus 365 ~ 365 (769)
.
T Consensus 513 ~ 513 (606)
T 3vq2_A 513 D 513 (606)
T ss_dssp E
T ss_pred C
Confidence 3
No 265
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=3.8e-30 Score=300.47 Aligned_cols=173 Identities=21% Similarity=0.201 Sum_probs=106.5
Q ss_pred CCCCCCCCCC--CCCCCCCCCCCcceEecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeeccccc
Q 004195 48 VSSSFNTTTV--TDFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLW 125 (769)
Q Consensus 48 ~l~~w~~~~~--~~~c~~~~~~~~~v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~ 125 (769)
.+++|+.+.. .++|.+.. +...|.|...+++++.- +.+......+|++|.++.+.+.+|.++++|++|+|++|+++
T Consensus 12 ~~~~~~~~~p~~~~~c~~~~-~~~~~~c~~~~l~~vP~-~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~ 89 (635)
T 4g8a_A 12 KLAAANSSIPESWEPCVEVV-PNITYQCMELNFYKIPD-NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ 89 (635)
T ss_dssp -------------CCSEEEE-TTTEEECTTSCCSSCCS-SSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred hhhcccCCCCCCCCCccccC-CCCEEECCCCCcCccCC-CCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCC
Confidence 5667765421 13454321 22357887544433210 00101111344555555555667777888888888888877
Q ss_pred CCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcc-cCCccc
Q 004195 126 GPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSG-FLPVSL 204 (769)
Q Consensus 126 g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l 204 (769)
+..|++|.+|++|++|+|++|+|++..|..|.+|++|++|+|++|++++..+..|+++++|++|+|++|.+++ .+|..+
T Consensus 90 ~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~ 169 (635)
T 4g8a_A 90 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYF 169 (635)
T ss_dssp EECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGG
T ss_pred CcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhh
Confidence 7767777788888888888888776666677778888888888888776666677778888888888887765 356677
Q ss_pred cCCCCCCEEEccCccccc
Q 004195 205 TGLQSLRVVSLSANHLSG 222 (769)
Q Consensus 205 ~~l~~L~~L~ls~N~l~~ 222 (769)
+++++|++|+|++|++++
T Consensus 170 ~~l~~L~~L~L~~N~l~~ 187 (635)
T 4g8a_A 170 SNLTNLEHLDLSSNKIQS 187 (635)
T ss_dssp GGCTTCCEEECCSSCCCE
T ss_pred ccchhhhhhcccCccccc
Confidence 777777777777776643
No 266
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.97 E-value=5e-30 Score=298.04 Aligned_cols=257 Identities=23% Similarity=0.256 Sum_probs=130.6
Q ss_pred cccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCcc-ccCCCcCCEEEcccCcCCccC--CccC
Q 004195 104 FFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQ-ISSLRNLQTLILDDNKFTGAV--PSEL 180 (769)
Q Consensus 104 ~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~L~~N~l~~~~--p~~~ 180 (769)
+|..+.++++|++|+|++|.+++..|..+.++++|++|++++|.+.+.+|.. +.++++|++|+|++|.+++.. |..+
T Consensus 293 lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 372 (606)
T 3t6q_A 293 LPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQL 372 (606)
T ss_dssp CCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTT
T ss_pred CChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhc
Confidence 3444455555555555555554444445555555555555555554444332 455555555555555554433 4445
Q ss_pred cCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC--CCCCccCcEEeccCCcCCCCCccc---ccCCc
Q 004195 181 SLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYFGPRFPRL---HKKMV 255 (769)
Q Consensus 181 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~--l~~l~~L~~l~l~~N~l~~~~p~~---~~~L~ 255 (769)
..+++|++|+|++|.+++..|..|.++++|+.|++++|++++..+. +..+++|+.|++++|.+++..|.. +++|+
T Consensus 373 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 452 (606)
T 3t6q_A 373 RNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQ 452 (606)
T ss_dssp TTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCC
T ss_pred ccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCC
Confidence 5555555555555555555555555555555555555555544332 445555555555555555444432 24455
Q ss_pred EEEeCCccccCCc--CchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEcc
Q 004195 256 TLVLRNNRFQFGL--NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLS 333 (769)
Q Consensus 256 ~L~l~~N~~~~~i--~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 333 (769)
+|++++|.+++.. .+..+..+++|++|+|++|.+++..|..|..+++|+.|+|++|++++..|..+..++.| .|+++
T Consensus 453 ~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~ 531 (606)
T 3t6q_A 453 HLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLA 531 (606)
T ss_dssp EEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECC
T ss_pred EEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECc
Confidence 5555555554311 12345555555555555555555555555555555555555555555555555555555 55555
Q ss_pred CCcCCCCCCccccccCCCceEECCCCCC
Q 004195 334 SNLLTGYLPSCLQVEAKTRLVLYSKNCL 361 (769)
Q Consensus 334 ~N~l~g~~p~~~~~~~~l~~l~l~~N~l 361 (769)
+|++++.+|..+..+++++.+++++|.+
T Consensus 532 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 559 (606)
T 3t6q_A 532 SNHISIILPSLLPILSQQRTINLRQNPL 559 (606)
T ss_dssp SSCCCCCCGGGHHHHHTSSEEECTTCCE
T ss_pred CCcccccCHhhcccCCCCCEEeCCCCCc
Confidence 5555555555555555555555555544
No 267
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=4.1e-30 Score=304.77 Aligned_cols=249 Identities=18% Similarity=0.217 Sum_probs=144.5
Q ss_pred CCccccccCCCCCCcEEEeeccc-ccC-CCCccccCCC-------cCceeeccCcccCCcCCc--cccCCCcCCEEEccc
Q 004195 101 TDTFFSTLGSLSSLKVLSLVSLG-LWG-PLPGSIAHSS-------SLEILNLSSNYLSGSIPV--QISSLRNLQTLILDD 169 (769)
Q Consensus 101 ~~~~~~~~~~l~~L~~L~L~~n~-l~g-~~p~~~~~l~-------~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~L~~ 169 (769)
.+.+|..|++|++|+.|+|++|+ ++| .+|..+++++ +|++|+|++|+++ .+|. .|+++++|++|+|++
T Consensus 504 ~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~ 582 (876)
T 4ecn_A 504 MTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVH 582 (876)
T ss_dssp CCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTT
T ss_pred CccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCC
Confidence 34444444444444444444444 444 4444433333 4444444444444 4444 455555555555555
Q ss_pred CcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCC-CCEEEccCccccccCCC-CCCCc--cCcEEeccCCcCCC
Q 004195 170 NKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQS-LRVVSLSANHLSGEIPD-LRNLK--NLRVFDVQDNYFGP 245 (769)
Q Consensus 170 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~-L~~L~ls~N~l~~~~p~-l~~l~--~L~~l~l~~N~l~~ 245 (769)
|+++ .+| .|+++++|+.|+|++|+++ .+|..+.++++ |+.|+|++|+++ .+|. +..++ +|+.|++++|.+.+
T Consensus 583 N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g 658 (876)
T 4ecn_A 583 NKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGS 658 (876)
T ss_dssp SCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTT
T ss_pred CCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCC
Confidence 5555 444 5555555555555555555 45555555555 555555555555 2332 33332 25666666666655
Q ss_pred CCcccc--------cCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCC--------CCCCEEEcc
Q 004195 246 RFPRLH--------KKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSL--------PSITYLDIH 309 (769)
Q Consensus 246 ~~p~~~--------~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l--------~~L~~L~l~ 309 (769)
.+|... .+|+.|+|++|.++ .+++..+..+++|+.|+|++|+++ .+|..+... ++|+.|+|+
T Consensus 659 ~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls 736 (876)
T 4ecn_A 659 EGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLR 736 (876)
T ss_dssp TSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECC
T ss_pred ccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECC
Confidence 544321 25667777777776 452333447788888888888887 455543332 278888888
Q ss_pred CCcCCccccccCC--CCCCCcEEEccCCcCCCCCCccccccCCCceEECCC
Q 004195 310 GNKLTGLLLQNMS--CNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSK 358 (769)
Q Consensus 310 ~N~l~~~~~~~~~--~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~ 358 (769)
+|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|++++
T Consensus 737 ~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~ 785 (876)
T 4ecn_A 737 FNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRH 785 (876)
T ss_dssp SSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCC
T ss_pred CCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCC
Confidence 88887 4666665 77888888888888887 677777777788887766
No 268
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=5.1e-30 Score=308.61 Aligned_cols=287 Identities=19% Similarity=0.199 Sum_probs=180.5
Q ss_pred CCeeEEEeCCCCCCCCC------------CCCCCCCCCCcc-ccccCCCCCCcEEEeecccccCCCCccccCCCcCceee
Q 004195 76 DNLTQLHIAGDNNNNIN------------GGLAHNFSTDTF-FSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILN 142 (769)
Q Consensus 76 ~~v~~l~l~~~~~~~~~------------~~l~~n~~~~~~-~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~ 142 (769)
.+++.|++++|.+.... .++++|...+.+ |..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 24 ~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 103 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELR 103 (844)
T ss_dssp TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEE
T ss_pred CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEee
Confidence 46777777766544321 112223222222 44555555555555555555555555555555555555
Q ss_pred ccCcccCCcCCcc--ccCCCcCCEEEcccCcCCccCC-ccCcCCcCCCEEeccCCCCcccCCccccCC--CCCCEEEccC
Q 004195 143 LSSNYLSGSIPVQ--ISSLRNLQTLILDDNKFTGAVP-SELSLLQVLSVLSLKNNSLSGFLPVSLTGL--QSLRVVSLSA 217 (769)
Q Consensus 143 Ls~N~l~g~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l--~~L~~L~ls~ 217 (769)
|++|.+++.+|.. |++|++|++|+|++|.+++..| ..|+++++|++|+|++|.+++..|..+..+ ++|+.|+++.
T Consensus 104 Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~ 183 (844)
T 3j0a_A 104 LYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAA 183 (844)
T ss_dssp CTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECC
T ss_pred CcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCC
Confidence 5555555544443 5555555555555555554433 345555555555555555555555555554 5555555555
Q ss_pred ccccccCCC-CCCCcc------CcEEeccCCcCCCCCccc----------------------------------------
Q 004195 218 NHLSGEIPD-LRNLKN------LRVFDVQDNYFGPRFPRL---------------------------------------- 250 (769)
Q Consensus 218 N~l~~~~p~-l~~l~~------L~~l~l~~N~l~~~~p~~---------------------------------------- 250 (769)
|.+++..|. ++.+.+ |+.|++++|.+++..+..
T Consensus 184 n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l 263 (844)
T 3j0a_A 184 NSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGL 263 (844)
T ss_dssp SBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTT
T ss_pred CccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhcc
Confidence 555554432 333333 777788777666544321
Q ss_pred -ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcE
Q 004195 251 -HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAF 329 (769)
Q Consensus 251 -~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 329 (769)
..+|+.|+|++|.+.+.. |..+..+++|+.|+|++|++.+..|..|.++++|+.|+|++|++++..+..+..+++|+.
T Consensus 264 ~~~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 264 ARSSVRHLDLSHGFVFSLN-SRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTSCCCEEECTTCCCCEEC-SCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred ccCCccEEECCCCcccccC-hhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 135777788888777543 677778888888888888888777777888888888888888888777778888888888
Q ss_pred EEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 330 VDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 330 l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
|++++|++++..+..+..+++++.+++++|.+++
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 8888888887777777777888888888887764
No 269
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=8.3e-30 Score=279.41 Aligned_cols=251 Identities=20% Similarity=0.219 Sum_probs=195.8
Q ss_pred cccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcC
Q 004195 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQV 185 (769)
Q Consensus 106 ~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 185 (769)
..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|+++...+..|.++++
T Consensus 63 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~ 142 (390)
T 3o6n_A 63 ALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPK 142 (390)
T ss_dssp HHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCC
Confidence 34677888888888888888777778888888888888888888777777888888888888888888544455688888
Q ss_pred CCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCcc-------------------CcEEeccCCcCCCC
Q 004195 186 LSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKN-------------------LRVFDVQDNYFGPR 246 (769)
Q Consensus 186 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~-------------------L~~l~l~~N~l~~~ 246 (769)
|++|+|++|.+++..|..|.++++|++|++++|++++. .+..+++ |+.|++++|.+...
T Consensus 143 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~ 220 (390)
T 3o6n_A 143 LTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV--DLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVV 220 (390)
T ss_dssp CCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC--CGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEE
T ss_pred CcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc--ccccccccceeecccccccccCCCCcceEEECCCCeeeec
Confidence 88888888888887778888888888888888888754 2333444 45555555555443
Q ss_pred CcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCC
Q 004195 247 FPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQ 326 (769)
Q Consensus 247 ~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 326 (769)
......+|+.|++++|.+++ +..+..+++|++|+|++|.+.+..|..|..+++|+.|+|++|++++. |..+..+++
T Consensus 221 ~~~~~~~L~~L~l~~n~l~~---~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~l~~ 296 (390)
T 3o6n_A 221 RGPVNVELTILKLQHNNLTD---TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL-NLYGQPIPT 296 (390)
T ss_dssp ECCCCSSCCEEECCSSCCCC---CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEE-ECSSSCCTT
T ss_pred cccccccccEEECCCCCCcc---cHHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCccc-CcccCCCCC
Confidence 33334678888888888875 35788888899999999988888888888888999999999988874 556677888
Q ss_pred CcEEEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 327 LAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 327 L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
|+.|+|++|+++ .+|..+..+++++.+++++|.++.
T Consensus 297 L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~ 332 (390)
T 3o6n_A 297 LKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT 332 (390)
T ss_dssp CCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC
T ss_pred CCEEECCCCcce-ecCccccccCcCCEEECCCCccce
Confidence 999999999888 456667778888888888888764
No 270
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=7.9e-30 Score=306.91 Aligned_cols=293 Identities=21% Similarity=0.173 Sum_probs=250.8
Q ss_pred ceEecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCC-CccccCCCcCceeeccCccc
Q 004195 70 TLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPL-PGSIAHSSSLEILNLSSNYL 148 (769)
Q Consensus 70 ~v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~-p~~~~~l~~L~~L~Ls~N~l 148 (769)
.+.|...+++.+.- ..-.....++++|.+.+..+..|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|++
T Consensus 8 ~~dcs~~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l 85 (844)
T 3j0a_A 8 IAFYRFCNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKI 85 (844)
T ss_dssp EEEESCCCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCC
T ss_pred EEEccCCCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcC
Confidence 47787666666542 1111123567888888888999999999999999999777766 78899999999999999999
Q ss_pred CCcCCccccCCCcCCEEEcccCcCCccCCcc--CcCCcCCCEEeccCCCCcccCC-ccccCCCCCCEEEccCccccccCC
Q 004195 149 SGSIPVQISSLRNLQTLILDDNKFTGAVPSE--LSLLQVLSVLSLKNNSLSGFLP-VSLTGLQSLRVVSLSANHLSGEIP 225 (769)
Q Consensus 149 ~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~ls~N~l~~~~p 225 (769)
++..|..|++|++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+
T Consensus 86 ~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~ 165 (844)
T 3j0a_A 86 YFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCE 165 (844)
T ss_dssp CEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCS
T ss_pred cccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCH
Confidence 9999999999999999999999999877765 9999999999999999998765 689999999999999999998776
Q ss_pred C-CCCC--ccCcEEeccCCcCCCCCcccc---------cCCcEEEeCCccccCCcCchhhcC------------------
Q 004195 226 D-LRNL--KNLRVFDVQDNYFGPRFPRLH---------KKMVTLVLRNNRFQFGLNPDELRS------------------ 275 (769)
Q Consensus 226 ~-l~~l--~~L~~l~l~~N~l~~~~p~~~---------~~L~~L~l~~N~~~~~i~p~~~~~------------------ 275 (769)
. +..+ ++|+.|+++.|.+.+..|... ..|+.|++++|.+++.+ +..+..
T Consensus 166 ~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~-~~~~~~~l~~~~l~~L~l~~~~~~ 244 (844)
T 3j0a_A 166 HELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDI-TGNFSNAISKSQAFSLILAHHIMG 244 (844)
T ss_dssp GGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTT-TSGGGGTSCSCCBSEEECCSSCCB
T ss_pred HHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhH-HHHHHhhcCcccccceeccccccc
Confidence 4 6666 899999999999998776532 13899999999887654 333221
Q ss_pred --------------------CCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCC
Q 004195 276 --------------------YNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSN 335 (769)
Q Consensus 276 --------------------l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 335 (769)
.++|+.|+|++|.+.+..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|
T Consensus 245 ~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N 324 (844)
T 3j0a_A 245 AGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYN 324 (844)
T ss_dssp CSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESC
T ss_pred ccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCC
Confidence 268999999999999988999999999999999999999999999999999999999999
Q ss_pred cCCCCCCccccccCCCceEECCCCCCChhh
Q 004195 336 LLTGYLPSCLQVEAKTRLVLYSKNCLSNEE 365 (769)
Q Consensus 336 ~l~g~~p~~~~~~~~l~~l~l~~N~l~~~~ 365 (769)
.+++..|..+..+++++.+++++|.+++..
T Consensus 325 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 354 (844)
T 3j0a_A 325 LLGELYSSNFYGLPKVAYIDLQKNHIAIIQ 354 (844)
T ss_dssp CCSCCCSCSCSSCTTCCEEECCSCCCCCCC
T ss_pred CCCccCHHHhcCCCCCCEEECCCCCCCccC
Confidence 999999999999999999999999987643
No 271
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.97 E-value=2.2e-29 Score=292.67 Aligned_cols=267 Identities=20% Similarity=0.193 Sum_probs=220.7
Q ss_pred CCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCc
Q 004195 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTG 174 (769)
Q Consensus 95 l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~ 174 (769)
+.+|.+.+..+..|+++++|+.|+|++|.++ .+|..+.++++|++|+|++|.+++..|..+.++++|++|+|++|.+.+
T Consensus 261 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~ 339 (606)
T 3t6q_A 261 LQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRL 339 (606)
T ss_dssp CTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCC
T ss_pred eecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCccc
Confidence 3445555666667888888999999988886 678888888899999999998888778888888899999999988887
Q ss_pred cCCcc-CcCCcCCCEEeccCCCCcccC--CccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCccc
Q 004195 175 AVPSE-LSLLQVLSVLSLKNNSLSGFL--PVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRL 250 (769)
Q Consensus 175 ~~p~~-~~~l~~L~~L~L~~N~l~~~~--p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~ 250 (769)
.+|.. +..+++|++|+|++|.+++.. |..+.++++|++|++++|++++..|. +..+++|+.|++++|.+.+..+..
T Consensus 340 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 419 (606)
T 3t6q_A 340 ELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQS 419 (606)
T ss_dssp BCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCC
T ss_pred ccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccch
Confidence 77654 888889999999999888765 77888888999999999988887664 778888999999998887765532
Q ss_pred ----ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCcccccc---CCccCCCCCCCCEEEccCCcCCccccccCCC
Q 004195 251 ----HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGP---FIPSLLSLPSITYLDIHGNKLTGLLLQNMSC 323 (769)
Q Consensus 251 ----~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 323 (769)
+++|+.|++++|.+++.. |..+..+++|++|++++|.+.+. .+..+..+++|+.|++++|++++..|..+..
T Consensus 420 ~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 498 (606)
T 3t6q_A 420 PFQNLHLLKVLNLSHSLLDISS-EQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTS 498 (606)
T ss_dssp TTTTCTTCCEEECTTCCCBTTC-TTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTT
T ss_pred hhhCcccCCEEECCCCccCCcC-HHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhcc
Confidence 467888999999888654 77888888999999999988773 2355788888999999999998888888888
Q ss_pred CCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCChh
Q 004195 324 NPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 324 l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 364 (769)
+++|+.|+|++|++++..|..+..++.+ .+++++|.+++.
T Consensus 499 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~ 538 (606)
T 3t6q_A 499 LKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISII 538 (606)
T ss_dssp CTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCC
T ss_pred ccCCCEEECCCCccCcCChhHhCccccc-EEECcCCccccc
Confidence 8999999999999988888888888888 888898888754
No 272
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.97 E-value=2.2e-29 Score=296.76 Aligned_cols=265 Identities=19% Similarity=0.154 Sum_probs=164.5
Q ss_pred CCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCC
Q 004195 98 NFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVP 177 (769)
Q Consensus 98 n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p 177 (769)
|.+.+..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|++|++++..|
T Consensus 35 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~ 114 (680)
T 1ziw_A 35 NQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKN 114 (680)
T ss_dssp SCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCS
T ss_pred CCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccCh
Confidence 33444445567777777777777777777777777777777777777777775444457777777777777777776666
Q ss_pred ccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC---CCCCccCcEEeccCCcCCCCCcccc---
Q 004195 178 SELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD---LRNLKNLRVFDVQDNYFGPRFPRLH--- 251 (769)
Q Consensus 178 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~---l~~l~~L~~l~l~~N~l~~~~p~~~--- 251 (769)
..|+++++|++|+|++|.+++..|..++++++|++|++++|++++..+. ...+++|+.|++++|.+++..|..+
T Consensus 115 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l 194 (680)
T 1ziw_A 115 NPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAI 194 (680)
T ss_dssp CTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGS
T ss_pred hHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhh
Confidence 6777777777777777777776677777777777777777777665543 2344667777777776665544311
Q ss_pred ---------------------------cCCcEEEeCCccccCCcCchhhcCCCc--CcEEeccCccccccCCccCCCCCC
Q 004195 252 ---------------------------KKMVTLVLRNNRFQFGLNPDELRSYNQ--LQKLDISLNRFVGPFIPSLLSLPS 302 (769)
Q Consensus 252 ---------------------------~~L~~L~l~~N~~~~~i~p~~~~~l~~--L~~L~Ls~N~l~~~~~~~~~~l~~ 302 (769)
.+|+.|++++|.+++.. |..+..++. |++|+|++|++++..|..|..+++
T Consensus 195 ~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~-~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 273 (680)
T 1ziw_A 195 GRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTS-NTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQ 273 (680)
T ss_dssp SEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEEC-TTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccC-hhHhhccCcCCCCEEECCCCCcCccCcccccCccc
Confidence 34556666666665433 555555543 666666666666655566666666
Q ss_pred CCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCC-----CCCc----cccccCCCceEECCCCCCCh
Q 004195 303 ITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTG-----YLPS----CLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 303 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g-----~~p~----~~~~~~~l~~l~l~~N~l~~ 363 (769)
|+.|++++|++++..|..+..+++|+.|++++|...+ .+|. .+..+++++.+++++|.+++
T Consensus 274 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~ 343 (680)
T 1ziw_A 274 LEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 343 (680)
T ss_dssp CCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCC
T ss_pred ccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCC
Confidence 6666666666666655555555555555555444332 1222 33344445555555554443
No 273
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=9.4e-29 Score=264.56 Aligned_cols=246 Identities=21% Similarity=0.239 Sum_probs=216.5
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
+.|++|+|++|++++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 57899999999999888889999999999999999999888999999999999999999998 6776665 79999999
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccc--cCC-CCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCc
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSG--EIP-DLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGL 268 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~--~~p-~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i 268 (769)
++|.+++..+..|.++++|+.|++++|.++. ..+ .+..+++|+.|++++|.++........+|+.|++++|.+++..
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~l~~~~ 208 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVD 208 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEEC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccccccCCEEECCCCcCCccC
Confidence 9999998888889999999999999999964 444 3788999999999999998655455688999999999998644
Q ss_pred CchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCcccccc
Q 004195 269 NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVE 348 (769)
Q Consensus 269 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~ 348 (769)
|..+..+++|++|+|++|.+++..+..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++..+..+...
T Consensus 209 -~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~ 286 (330)
T 1xku_A 209 -AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPP 286 (330)
T ss_dssp -TGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCS
T ss_pred -HHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCc
Confidence 889999999999999999999988888999999999999999998 577888999999999999999998877766432
Q ss_pred ------CCCceEECCCCCCC
Q 004195 349 ------AKTRLVLYSKNCLS 362 (769)
Q Consensus 349 ------~~l~~l~l~~N~l~ 362 (769)
..+..+++++|.+.
T Consensus 287 ~~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 287 GYNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp SCCTTSCCCSEEECCSSSSC
T ss_pred ccccccccccceEeecCccc
Confidence 56778899999875
No 274
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.8e-29 Score=269.54 Aligned_cols=227 Identities=22% Similarity=0.259 Sum_probs=204.1
Q ss_pred cCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCC
Q 004195 74 YEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIP 153 (769)
Q Consensus 74 ~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 153 (769)
...+|+.|++.++.+. .+|..++++++|++|+|++|.++ .+|..|+++++|++|+|++|.++ .+|
T Consensus 79 ~~~~l~~L~L~~n~l~-------------~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp 143 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-------------QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALP 143 (328)
T ss_dssp TSTTCCEEEEESSCCS-------------SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCC
T ss_pred cccceeEEEccCCCch-------------hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCc
Confidence 3468999999887654 34567888999999999999998 89999999999999999999999 789
Q ss_pred ccccCCCcCCEEEcccCcCCccCCccCcC---------CcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccC
Q 004195 154 VQISSLRNLQTLILDDNKFTGAVPSELSL---------LQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEI 224 (769)
Q Consensus 154 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~---------l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~ 224 (769)
..|+++++|++|+|++|++.+.+|..++. +++|++|+|++|.++ .+|..++++++|++|+|++|++++.+
T Consensus 144 ~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~ 222 (328)
T 4fcg_A 144 ASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALG 222 (328)
T ss_dssp GGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCC
T ss_pred HHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCc
Confidence 99999999999999999999999988765 999999999999999 78999999999999999999999877
Q ss_pred CCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCC
Q 004195 225 PDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSIT 304 (769)
Q Consensus 225 p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 304 (769)
+.+..+++|+.|++++|.+.+ .+ |..+..+++|++|+|++|++.+.+|..+.++++|+
T Consensus 223 ~~l~~l~~L~~L~Ls~n~~~~---------------------~~-p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~ 280 (328)
T 4fcg_A 223 PAIHHLPKLEELDLRGCTALR---------------------NY-PPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLE 280 (328)
T ss_dssp GGGGGCTTCCEEECTTCTTCC---------------------BC-CCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCC
T ss_pred hhhccCCCCCEEECcCCcchh---------------------hh-HHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCC
Confidence 778888888888887776653 33 66788899999999999999999999999999999
Q ss_pred EEEccCCcCCccccccCCCCCCCcEEEccCCcCC
Q 004195 305 YLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338 (769)
Q Consensus 305 ~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 338 (769)
.|+|++|++.+.+|..++.+++|+.+++..|.+.
T Consensus 281 ~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 281 KLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp EEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred EEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 9999999999999999999999999999987765
No 275
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.96 E-value=7.4e-29 Score=288.14 Aligned_cols=302 Identities=20% Similarity=0.188 Sum_probs=238.5
Q ss_pred CCCCCCCCCCcceEecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcC
Q 004195 59 DFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSL 138 (769)
Q Consensus 59 ~~c~~~~~~~~~v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L 138 (769)
++|.+.. ....|.|.+.+++.+.-. ..-.....++++|.+.+..+..|.++++|++|+|++|.+++..|..|+++++|
T Consensus 5 ~~c~~~~-~~~~~~c~~~~l~~ip~~-~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L 82 (606)
T 3vq2_A 5 NPCIEVV-PNITYQCMDQKLSKVPDD-IPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHL 82 (606)
T ss_dssp -CCEEEE-TTTEEECTTSCCSSCCTT-SCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTC
T ss_pred CCceecC-CCCceEccCCCcccCCCC-CCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhc
Confidence 5576521 223578876666665421 11111124677888888888899999999999999999999999999999999
Q ss_pred ceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcc-cCCccccCCCCCCEEEccC
Q 004195 139 EILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSG-FLPVSLTGLQSLRVVSLSA 217 (769)
Q Consensus 139 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~ls~ 217 (769)
++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++ .+|..|+++++|++|++++
T Consensus 83 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~ 162 (606)
T 3vq2_A 83 SNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSY 162 (606)
T ss_dssp CEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCS
T ss_pred CEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccC
Confidence 999999999999889999999999999999999998888899999999999999999986 6799999999999999999
Q ss_pred ccccccCCC-CCCCc---------------------------cCcEEecc------------------------------
Q 004195 218 NHLSGEIPD-LRNLK---------------------------NLRVFDVQ------------------------------ 239 (769)
Q Consensus 218 N~l~~~~p~-l~~l~---------------------------~L~~l~l~------------------------------ 239 (769)
|++++..|. ++.++ +|+.|+++
T Consensus 163 n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~ 242 (606)
T 3vq2_A 163 NYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFK 242 (606)
T ss_dssp SCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCT
T ss_pred CcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccc
Confidence 998775442 11111 22222222
Q ss_pred -------------------------------------------------------------------------CCcCCCC
Q 004195 240 -------------------------------------------------------------------------DNYFGPR 246 (769)
Q Consensus 240 -------------------------------------------------------------------------~N~l~~~ 246 (769)
+|.+ +.
T Consensus 243 ~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~ 321 (606)
T 3vq2_A 243 DERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQ 321 (606)
T ss_dssp TSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SS
T ss_pred cCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccC-cc
Confidence 2222 11
Q ss_pred Ccc-------------------------------------------------cccCCcEEEeCCccccCCcCchhhcCCC
Q 004195 247 FPR-------------------------------------------------LHKKMVTLVLRNNRFQFGLNPDELRSYN 277 (769)
Q Consensus 247 ~p~-------------------------------------------------~~~~L~~L~l~~N~~~~~i~p~~~~~l~ 277 (769)
+|. .+++|++|++++|.+++ + |..+..++
T Consensus 322 lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~-~~~~~~l~ 399 (606)
T 3vq2_A 322 FPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-M-SANFMGLE 399 (606)
T ss_dssp CCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-E-CCCCTTCT
T ss_pred cccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-c-hhhccCCC
Confidence 110 01234444444444442 3 46778889
Q ss_pred cCcEEeccCccccccCC-ccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCC-CCCccccccCCCceEE
Q 004195 278 QLQKLDISLNRFVGPFI-PSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTG-YLPSCLQVEAKTRLVL 355 (769)
Q Consensus 278 ~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g-~~p~~~~~~~~l~~l~ 355 (769)
+|+.|++++|.+.+..| ..+.++++|+.|++++|.+++..|..+..+++|+.|++++|.+++ .+|..+..+++++.++
T Consensus 400 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 479 (606)
T 3vq2_A 400 ELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLD 479 (606)
T ss_dssp TCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEE
Confidence 99999999999999887 689999999999999999999999999999999999999999998 4788999999999999
Q ss_pred CCCCCCChhh
Q 004195 356 YSKNCLSNEE 365 (769)
Q Consensus 356 l~~N~l~~~~ 365 (769)
+++|.+++..
T Consensus 480 Ls~n~l~~~~ 489 (606)
T 3vq2_A 480 LSKCQLEQIS 489 (606)
T ss_dssp CTTSCCCEEC
T ss_pred CCCCcCCccC
Confidence 9999998754
No 276
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.96 E-value=2.3e-29 Score=286.79 Aligned_cols=112 Identities=15% Similarity=0.083 Sum_probs=78.6
Q ss_pred CCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCc--cccccCCCCCCCcEE
Q 004195 253 KMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTG--LLLQNMSCNPQLAFV 330 (769)
Q Consensus 253 ~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~l 330 (769)
+|+.|++++|.+.... .+..+++|++|++++|++++.+|..+.++++|+.|++++|++++ .+|..+..+++|+.|
T Consensus 303 ~L~~L~l~~n~l~~~~---~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L 379 (520)
T 2z7x_B 303 NIKNFTVSGTRMVHML---CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQL 379 (520)
T ss_dssp CCSEEEEESSCCCCCC---CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEE
T ss_pred ceeEEEcCCCcccccc---chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEE
Confidence 3555555555554211 12567778888888888887777778888888888888888876 455667778888888
Q ss_pred EccCCcCCCCCCcc-ccccCCCceEECCCCCCChhhhc
Q 004195 331 DLSSNLLTGYLPSC-LQVEAKTRLVLYSKNCLSNEEQE 367 (769)
Q Consensus 331 ~l~~N~l~g~~p~~-~~~~~~l~~l~l~~N~l~~~~~~ 367 (769)
++++|++++.+|.. +..+++++.+++++|.+++..+.
T Consensus 380 ~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 417 (520)
T 2z7x_B 380 DISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFR 417 (520)
T ss_dssp ECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGG
T ss_pred ECCCCcCCcccccchhccCccCCEEECcCCCCCcchhh
Confidence 88888888755543 56667778888888877765543
No 277
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.96 E-value=7.4e-29 Score=285.26 Aligned_cols=259 Identities=21% Similarity=0.242 Sum_probs=163.6
Q ss_pred CCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCc
Q 004195 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTG 174 (769)
Q Consensus 95 l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~ 174 (769)
+++|.+.+..+..|.++++|++|+|++|++++..|+.|+++++|++|||++|+|+ .+|.. .+++|++|+|++|++++
T Consensus 59 Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~ 135 (562)
T 3a79_B 59 LSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDV 135 (562)
T ss_dssp CCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSB
T ss_pred CCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccc
Confidence 4455566666677888888888888888888877888888888888888888887 56665 78888888888888876
Q ss_pred -cCCccCcCCcCCCEEeccCCCCcccCCccccCCCCC--CEEEccCccc--cccCCC-CCCC------------------
Q 004195 175 -AVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSL--RVVSLSANHL--SGEIPD-LRNL------------------ 230 (769)
Q Consensus 175 -~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~ls~N~l--~~~~p~-l~~l------------------ 230 (769)
.+|..|+++++|++|+|++|.+++. .+.++++| +.|++++|++ ++..|. +..+
T Consensus 136 l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~ 212 (562)
T 3a79_B 136 LPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQ 212 (562)
T ss_dssp CCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCC
T ss_pred cCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhh
Confidence 3467888888888888888877642 22233333 5555555444 322221 1100
Q ss_pred ---------------------------------------------------------------ccCcEEeccCCcCCCCC
Q 004195 231 ---------------------------------------------------------------KNLRVFDVQDNYFGPRF 247 (769)
Q Consensus 231 ---------------------------------------------------------------~~L~~l~l~~N~l~~~~ 247 (769)
.+|++|++++|.++|.+
T Consensus 213 ~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~i 292 (562)
T 3a79_B 213 VNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERI 292 (562)
T ss_dssp CEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCC
T ss_pred hhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccc
Confidence 03333333333333322
Q ss_pred c--------------------------------------------------------ccccCCcEEEeCCccccCCcCch
Q 004195 248 P--------------------------------------------------------RLHKKMVTLVLRNNRFQFGLNPD 271 (769)
Q Consensus 248 p--------------------------------------------------------~~~~~L~~L~l~~N~~~~~i~p~ 271 (769)
| ...++|++|++++|.+++.+ |.
T Consensus 293 p~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~ 371 (562)
T 3a79_B 293 DREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSV-FQ 371 (562)
T ss_dssp CCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTT-TT
T ss_pred cchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccccch-hh
Confidence 2 22345666777777776544 66
Q ss_pred hhcCCCcCcEEeccCcccccc--CCccCCCCCCCCEEEccCCcCCcccc-ccCCCCCCCcEEEccCCcCCCCCCcccccc
Q 004195 272 ELRSYNQLQKLDISLNRFVGP--FIPSLLSLPSITYLDIHGNKLTGLLL-QNMSCNPQLAFVDLSSNLLTGYLPSCLQVE 348 (769)
Q Consensus 272 ~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~ 348 (769)
.+..+++|++|+|++|++++. +|..+.++++|+.|++++|++++.+| ..+..+++|+.|++++|++++.+|..+.
T Consensus 372 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~-- 449 (562)
T 3a79_B 372 GCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP-- 449 (562)
T ss_dssp TCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--
T ss_pred hhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--
Confidence 666777777777777776652 23456667777777777777766333 3456666666666666666666555443
Q ss_pred CCCceEECCCCCCC
Q 004195 349 AKTRLVLYSKNCLS 362 (769)
Q Consensus 349 ~~l~~l~l~~N~l~ 362 (769)
++++.+++++|.++
T Consensus 450 ~~L~~L~L~~N~l~ 463 (562)
T 3a79_B 450 PKVKVLDLHNNRIM 463 (562)
T ss_dssp TTCSEEECCSSCCC
T ss_pred CcCCEEECCCCcCc
Confidence 45666666666665
No 278
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=7.1e-29 Score=265.50 Aligned_cols=260 Identities=21% Similarity=0.229 Sum_probs=224.6
Q ss_pred CCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCC
Q 004195 94 GLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFT 173 (769)
Q Consensus 94 ~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 173 (769)
++++|.+.+..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|..+. ++|++|+|++|+++
T Consensus 58 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~ 134 (330)
T 1xku_A 58 DLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEIT 134 (330)
T ss_dssp ECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCC
T ss_pred ECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCccc
Confidence 34556666666678999999999999999999998999999999999999999998 6777665 79999999999999
Q ss_pred ccCCccCcCCcCCCEEeccCCCCc--ccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCccc-
Q 004195 174 GAVPSELSLLQVLSVLSLKNNSLS--GFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRL- 250 (769)
Q Consensus 174 ~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~- 250 (769)
+..+..|.++++|++|+|++|.++ +..+..+.++++|++|++++|.++.....+. ++|+.|++++|.+++..|..
T Consensus 135 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~ 212 (330)
T 1xku_A 135 KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLP--PSLTELHLDGNKITKVDAASL 212 (330)
T ss_dssp BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCC--TTCSEEECTTSCCCEECTGGG
T ss_pred ccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCcccc--ccCCEEECCCCcCCccCHHHh
Confidence 888888999999999999999996 4788899999999999999999987544443 89999999999998876654
Q ss_pred --ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCC-----
Q 004195 251 --HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSC----- 323 (769)
Q Consensus 251 --~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~----- 323 (769)
+++|+.|+|++|.+++. .+..+..+++|++|+|++|.++ .+|..+..+++|++|++++|++++..+..|..
T Consensus 213 ~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~ 290 (330)
T 1xku_A 213 KGLNNLAKLGLSFNSISAV-DNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNT 290 (330)
T ss_dssp TTCTTCCEEECCSSCCCEE-CTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCT
T ss_pred cCCCCCCEEECCCCcCcee-ChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCccccc
Confidence 46899999999999864 3778999999999999999998 57888999999999999999999988777754
Q ss_pred -CCCCcEEEccCCcCCC--CCCccccccCCCceEECCCCC
Q 004195 324 -NPQLAFVDLSSNLLTG--YLPSCLQVEAKTRLVLYSKNC 360 (769)
Q Consensus 324 -l~~L~~l~l~~N~l~g--~~p~~~~~~~~l~~l~l~~N~ 360 (769)
.+.|+.+++++|.+.. ..|..+..+..++.+++++|+
T Consensus 291 ~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 291 KKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp TSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred ccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 3788999999999863 667788888889999998884
No 279
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=7.6e-29 Score=265.51 Aligned_cols=245 Identities=21% Similarity=0.213 Sum_probs=213.3
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
++|+.|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|..+. ++|++|+|
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 68999999999998888889999999999999999999888999999999999999999998 6676665 89999999
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccc--cCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCc
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSG--EIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGL 268 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~--~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i 268 (769)
++|.+++..+..|.++++|+.|++++|.++. ..+. +..+ +|+.|++++|.+++......++|++|++++|.+++..
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~ 209 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIE 209 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCC
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCccccCCCCEEECCCCcCCccC
Confidence 9999998777789999999999999999963 4443 6666 9999999999998755555678999999999998643
Q ss_pred CchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCcccccc
Q 004195 269 NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVE 348 (769)
Q Consensus 269 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~ 348 (769)
+..+..+++|++|+|++|.+++..+..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++..+..+...
T Consensus 210 -~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~ 287 (332)
T 2ft3_A 210 -LEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPV 287 (332)
T ss_dssp -TTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCS
T ss_pred -HHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcccc
Confidence 788999999999999999999987778999999999999999998 577788999999999999999998777766543
Q ss_pred ------CCCceEECCCCCCC
Q 004195 349 ------AKTRLVLYSKNCLS 362 (769)
Q Consensus 349 ------~~l~~l~l~~N~l~ 362 (769)
..++.+++++|.+.
T Consensus 288 ~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 288 GFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp SCCSSSCCBSEEECCSSSSC
T ss_pred ccccccccccceEeecCccc
Confidence 45788999999876
No 280
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.96 E-value=4.8e-29 Score=284.20 Aligned_cols=132 Identities=20% Similarity=0.230 Sum_probs=115.1
Q ss_pred CCCccCcEEeccCCcCCCCCccc---ccCCcEEEeCCccccC--CcCchhhcCCCcCcEEeccCccccccCCcc-CCCCC
Q 004195 228 RNLKNLRVFDVQDNYFGPRFPRL---HKKMVTLVLRNNRFQF--GLNPDELRSYNQLQKLDISLNRFVGPFIPS-LLSLP 301 (769)
Q Consensus 228 ~~l~~L~~l~l~~N~l~~~~p~~---~~~L~~L~l~~N~~~~--~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~ 301 (769)
..+++|+.|++++|.+++.+|.. +++|++|++++|++++ .+ |..+..+++|++|++++|.+.+.+|.. +..++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~-~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~ 399 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKI-AEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTK 399 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHH-HHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccc-hHHHhhCCCCCEEECCCCcCCcccccchhccCc
Confidence 57788999999999999877754 5689999999999985 34 677999999999999999999866654 88899
Q ss_pred CCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 302 SITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 302 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
+|+.|++++|++++..|..+. ++|+.|++++|+++ .+|..+..+++++.+++++|.++.
T Consensus 400 ~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~ 458 (520)
T 2z7x_B 400 SLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS 458 (520)
T ss_dssp TCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC
T ss_pred cCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc
Confidence 999999999999998887765 78999999999999 788877789999999999999874
No 281
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.96 E-value=1.6e-29 Score=290.15 Aligned_cols=266 Identities=24% Similarity=0.256 Sum_probs=179.0
Q ss_pred CCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCc
Q 004195 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTG 174 (769)
Q Consensus 95 l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~ 174 (769)
+++|.+.+..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++
T Consensus 33 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 112 (549)
T 2z81_A 33 LSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQT 112 (549)
T ss_dssp CCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSS
T ss_pred CcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccc
Confidence 33444444556677788888888888888887777788888888888888888887666668888888888888888875
Q ss_pred -cCCccCcCCcCCCEEeccCCCCcccCC-ccccCCCCCCEEEccCccccccCCC-CC-----------------------
Q 004195 175 -AVPSELSLLQVLSVLSLKNNSLSGFLP-VSLTGLQSLRVVSLSANHLSGEIPD-LR----------------------- 228 (769)
Q Consensus 175 -~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~ls~N~l~~~~p~-l~----------------------- 228 (769)
.+|..|+++++|++|+|++|.+.+.+| ..|.++++|++|++++|++++.+|. +.
T Consensus 113 ~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~ 192 (549)
T 2z81_A 113 LGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFA 192 (549)
T ss_dssp SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHH
T ss_pred cchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhH
Confidence 356778888888888888887444444 5778888888888888888776553 33
Q ss_pred -CCccCcEEeccCCcCCCCC----c--cccc-------------------------------------------------
Q 004195 229 -NLKNLRVFDVQDNYFGPRF----P--RLHK------------------------------------------------- 252 (769)
Q Consensus 229 -~l~~L~~l~l~~N~l~~~~----p--~~~~------------------------------------------------- 252 (769)
.+++|+.|++++|.+++.. + ....
T Consensus 193 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~ 272 (549)
T 2z81_A 193 DILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPS 272 (549)
T ss_dssp HSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCC
T ss_pred hhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhcccccccccccccccccccccc
Confidence 3566777777777776521 0 0011
Q ss_pred --------------------------------------CCcEEEeCCccccCCcCchhh-cCCCcCcEEeccCccccccC
Q 004195 253 --------------------------------------KMVTLVLRNNRFQFGLNPDEL-RSYNQLQKLDISLNRFVGPF 293 (769)
Q Consensus 253 --------------------------------------~L~~L~l~~N~~~~~i~p~~~-~~l~~L~~L~Ls~N~l~~~~ 293 (769)
+|+.|++++|.+. .+ |..+ ..+++|++|+|++|++.+.+
T Consensus 273 ~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~i-p~~~~~~l~~L~~L~Ls~N~l~~~~ 350 (549)
T 2z81_A 273 ESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LV-PCSFSQHLKSLEFLDLSENLMVEEY 350 (549)
T ss_dssp TTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CC-CHHHHHHCTTCCEEECCSSCCCHHH
T ss_pred chhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cC-CHHHHhcCccccEEEccCCcccccc
Confidence 2333344444433 23 3333 45677777777777777655
Q ss_pred Cc---cCCCCCCCCEEEccCCcCCcccc--ccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 294 IP---SLLSLPSITYLDIHGNKLTGLLL--QNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 294 ~~---~~~~l~~L~~L~l~~N~l~~~~~--~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
|+ .++.+++|+.|+|++|++++..+ ..+..+++|+.|++++|+++ .+|..+..+++++.+++++|.++.
T Consensus 351 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~ 424 (549)
T 2z81_A 351 LKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV 424 (549)
T ss_dssp HHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC
T ss_pred ccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc
Confidence 32 35667777777777777766532 44666777777777777777 466666666777777777777653
No 282
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.96 E-value=6.7e-29 Score=286.31 Aligned_cols=138 Identities=19% Similarity=0.179 Sum_probs=104.7
Q ss_pred CCCccCcEEeccCCcCCCCCccc--ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCE
Q 004195 228 RNLKNLRVFDVQDNYFGPRFPRL--HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITY 305 (769)
Q Consensus 228 ~~l~~L~~l~l~~N~l~~~~p~~--~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 305 (769)
..+++|+.|++++|.+.+..+.. +++|+.|++++|.+.+...+..+..+++|++|++++|.+.+..|..+.++++|+.
T Consensus 370 ~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 449 (570)
T 2z63_A 370 FGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 449 (570)
T ss_dssp HTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCE
T ss_pred cccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcE
Confidence 34567778888888776554432 4678888888888876543356777888888888888888777777888888888
Q ss_pred EEccCCcCC-ccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCChhh
Q 004195 306 LDIHGNKLT-GLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEE 365 (769)
Q Consensus 306 L~l~~N~l~-~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~~ 365 (769)
|++++|.++ +.+|..+..+++|+.|++++|++++..|..+..+++++.+++++|.+++..
T Consensus 450 L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 510 (570)
T 2z63_A 450 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVP 510 (570)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred EECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCC
Confidence 888888877 567777888888888888888888777877777788888888888777643
No 283
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=3.2e-28 Score=260.66 Aligned_cols=259 Identities=20% Similarity=0.231 Sum_probs=220.1
Q ss_pred CCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCC
Q 004195 94 GLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFT 173 (769)
Q Consensus 94 ~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 173 (769)
++++|.+....+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|+++ .+|..+. ++|++|+|++|+++
T Consensus 60 ~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~ 136 (332)
T 2ft3_A 60 DLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIR 136 (332)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCC
T ss_pred ECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccC
Confidence 34555555566778999999999999999999888999999999999999999998 6777665 89999999999999
Q ss_pred ccCCccCcCCcCCCEEeccCCCCc--ccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCccc-
Q 004195 174 GAVPSELSLLQVLSVLSLKNNSLS--GFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRL- 250 (769)
Q Consensus 174 ~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~- 250 (769)
+..+..|.++++|++|++++|.++ +..|..+..+ +|+.|++++|++++.+..+. ++|+.|++++|.+++..+..
T Consensus 137 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~l 213 (332)
T 2ft3_A 137 KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDL 213 (332)
T ss_dssp CCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSC--SSCSCCBCCSSCCCCCCTTSS
T ss_pred ccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCcccc--CCCCEEECCCCcCCccCHHHh
Confidence 777778999999999999999996 4778888888 99999999999987544443 78999999999998877653
Q ss_pred --ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCC----
Q 004195 251 --HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCN---- 324 (769)
Q Consensus 251 --~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l---- 324 (769)
+.+|+.|+|++|.+++.. +..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|++++..+..|...
T Consensus 214 ~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~ 291 (332)
T 2ft3_A 214 LRYSKLYRLGLGHNQIRMIE-NGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGV 291 (332)
T ss_dssp TTCTTCSCCBCCSSCCCCCC-TTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCS
T ss_pred cCCCCCCEEECCCCcCCcCC-hhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcccccccc
Confidence 468999999999998643 778999999999999999998 578889999999999999999998877777653
Q ss_pred --CCCcEEEccCCcCC--CCCCccccccCCCceEECCCCC
Q 004195 325 --PQLAFVDLSSNLLT--GYLPSCLQVEAKTRLVLYSKNC 360 (769)
Q Consensus 325 --~~L~~l~l~~N~l~--g~~p~~~~~~~~l~~l~l~~N~ 360 (769)
+.|+.|++++|.+. +..|..+..++.++.+++++|.
T Consensus 292 ~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 292 KRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 67899999999988 6778888889999999998874
No 284
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.96 E-value=3.8e-28 Score=286.13 Aligned_cols=285 Identities=19% Similarity=0.188 Sum_probs=235.7
Q ss_pred CCeeEEEeCCCCCCCCC------------CCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeec
Q 004195 76 DNLTQLHIAGDNNNNIN------------GGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNL 143 (769)
Q Consensus 76 ~~v~~l~l~~~~~~~~~------------~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~L 143 (769)
.+++.|+++++.+...+ .++++|.+.+..|..|+++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 36888999888665432 235567777888889999999999999999998766668999999999999
Q ss_pred cCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCcccc--CCCCCCEEEccCcccc
Q 004195 144 SSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLT--GLQSLRVVSLSANHLS 221 (769)
Q Consensus 144 s~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~ls~N~l~ 221 (769)
++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..+. .+++|+.|++++|+++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 99999988788999999999999999999999999999999999999999999988877654 5689999999999999
Q ss_pred ccCCC-CCCC---------------------------ccCcEEeccCCcCCCCCcccc-----cCCcEEEeCCccccCCc
Q 004195 222 GEIPD-LRNL---------------------------KNLRVFDVQDNYFGPRFPRLH-----KKMVTLVLRNNRFQFGL 268 (769)
Q Consensus 222 ~~~p~-l~~l---------------------------~~L~~l~l~~N~l~~~~p~~~-----~~L~~L~l~~N~~~~~i 268 (769)
+..|. +..+ ++|+.|++++|.+.+..|..+ .+|+.|+|++|.+++..
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 87764 2222 567888888888887766543 34999999999998644
Q ss_pred CchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCc-----cccc----cCCCCCCCcEEEccCCcCCC
Q 004195 269 NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTG-----LLLQ----NMSCNPQLAFVDLSSNLLTG 339 (769)
Q Consensus 269 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-----~~~~----~~~~l~~L~~l~l~~N~l~g 339 (769)
|..+..+++|++|+|++|++.+..|..|.++++|+.|++++|...+ .+|. .+..+++|+.|++++|.+++
T Consensus 265 -~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~ 343 (680)
T 1ziw_A 265 -NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 343 (680)
T ss_dssp -TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCC
T ss_pred -cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCC
Confidence 7889999999999999999999888888888888888888776554 2232 66778888888888888888
Q ss_pred CCCccccccCCCceEECCCCCC
Q 004195 340 YLPSCLQVEAKTRLVLYSKNCL 361 (769)
Q Consensus 340 ~~p~~~~~~~~l~~l~l~~N~l 361 (769)
..|..+..+++++.+++++|.+
T Consensus 344 ~~~~~~~~l~~L~~L~Ls~n~~ 365 (680)
T 1ziw_A 344 IKSNMFTGLINLKYLSLSNSFT 365 (680)
T ss_dssp CCTTTTTTCTTCCEEECTTCBS
T ss_pred CChhHhccccCCcEEECCCCch
Confidence 8777777777777777777754
No 285
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.96 E-value=5.2e-28 Score=278.23 Aligned_cols=267 Identities=18% Similarity=0.115 Sum_probs=215.6
Q ss_pred eEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccC
Q 004195 79 TQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISS 158 (769)
Q Consensus 79 ~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 158 (769)
+.++++++.+..+ |..+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|++
T Consensus 34 ~~l~ls~~~L~~i-------------p~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 98 (562)
T 3a79_B 34 SMVDYSNRNLTHV-------------PKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLF 98 (562)
T ss_dssp CEEECTTSCCCSC-------------CTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTT
T ss_pred cEEEcCCCCCccC-------------CCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCC
Confidence 6777777665532 22232 78999999999999988899999999999999999999988999999
Q ss_pred CCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcc-cCCccccCCCCCCEEEccCccccccCCCCCCCccC--cE
Q 004195 159 LRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSG-FLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNL--RV 235 (769)
Q Consensus 159 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L--~~ 235 (769)
+++|++|+|++|+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++ ..+..+++| +.
T Consensus 99 l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~L~L~~ 173 (562)
T 3a79_B 99 NQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ--LDLLPVAHLHLSC 173 (562)
T ss_dssp CTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT--TTTGGGTTSCEEE
T ss_pred CCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc--CchhhhhhceeeE
Confidence 999999999999999 67766 89999999999999997 457899999999999999999986 345566666 99
Q ss_pred EeccCCcC--CCCCcccc--------------------------------------------------------------
Q 004195 236 FDVQDNYF--GPRFPRLH-------------------------------------------------------------- 251 (769)
Q Consensus 236 l~l~~N~l--~~~~p~~~-------------------------------------------------------------- 251 (769)
|++++|.+ ++..|..+
T Consensus 174 L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~ 253 (562)
T 3a79_B 174 ILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLN 253 (562)
T ss_dssp EEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEE
T ss_pred EEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceE
Confidence 99999988 55443221
Q ss_pred ----------------------cCCcEEEeCCccccCCcCchhh------------------------------------
Q 004195 252 ----------------------KKMVTLVLRNNRFQFGLNPDEL------------------------------------ 273 (769)
Q Consensus 252 ----------------------~~L~~L~l~~N~~~~~i~p~~~------------------------------------ 273 (769)
.+|++|++++|.++|.+ |..+
T Consensus 254 L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~i-p~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~ 332 (562)
T 3a79_B 254 VTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERI-DREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMN 332 (562)
T ss_dssp EEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCC-CCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCC
T ss_pred EEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccc-cchhhhcccccchheehhhcccceeecChhhhhhhhccCc
Confidence 15677778888887766 4433
Q ss_pred -----------------cCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCcc--ccccCCCCCCCcEEEccC
Q 004195 274 -----------------RSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGL--LLQNMSCNPQLAFVDLSS 334 (769)
Q Consensus 274 -----------------~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~--~~~~~~~l~~L~~l~l~~ 334 (769)
..+++|++|++++|++++.+|..+.++++|+.|+|++|++++. +|..+..+++|+.|++++
T Consensus 333 L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~ 412 (562)
T 3a79_B 333 IKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSL 412 (562)
T ss_dssp CSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTT
T ss_pred ceEEEccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCC
Confidence 5677888888888888888888888888888888888888873 356778888888888888
Q ss_pred CcCCCCCCc-cccccCCCceEECCCCCCChhhh
Q 004195 335 NLLTGYLPS-CLQVEAKTRLVLYSKNCLSNEEQ 366 (769)
Q Consensus 335 N~l~g~~p~-~~~~~~~l~~l~l~~N~l~~~~~ 366 (769)
|++++.+|. .+..+++++.+++++|.+++..+
T Consensus 413 N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 445 (562)
T 3a79_B 413 NSLNSHAYDRTCAWAESILVLNLSSNMLTGSVF 445 (562)
T ss_dssp SCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGG
T ss_pred CcCCCccChhhhcCcccCCEEECCCCCCCcchh
Confidence 888885554 46677888888888888876544
No 286
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.96 E-value=3.8e-28 Score=280.00 Aligned_cols=287 Identities=20% Similarity=0.175 Sum_probs=207.5
Q ss_pred CeeEEEeCCCCCCCCC------------CCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeecc
Q 004195 77 NLTQLHIAGDNNNNIN------------GGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLS 144 (769)
Q Consensus 77 ~v~~l~l~~~~~~~~~------------~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls 144 (769)
+++.|+++++.+.... .++++|.+.+..+..|+++++|++|+|++|.+++..|..|+++++|++|+|+
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 5788888877654321 2345566666666778888888888888888887777888888888888888
Q ss_pred CcccCCcCCccccCCCcCCEEEcccCcCCc-cCCccCcCCcCCCEEeccCCCCcccCCccccCCCCC----CEEEccCcc
Q 004195 145 SNYLSGSIPVQISSLRNLQTLILDDNKFTG-AVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSL----RVVSLSANH 219 (769)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L----~~L~ls~N~ 219 (769)
+|++++..+..|+++++|++|+|++|.+++ .+|..|+++++|++|++++|.+++..|..++.+++| +.|++++|.
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~ 188 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCC
Confidence 888886555578888888888888888876 468888888888888888888776655544444444 344444443
Q ss_pred ccccCC--------------------------------------------------------------------------
Q 004195 220 LSGEIP-------------------------------------------------------------------------- 225 (769)
Q Consensus 220 l~~~~p-------------------------------------------------------------------------- 225 (769)
+++..|
T Consensus 189 l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~ 268 (570)
T 2z63_A 189 MNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 268 (570)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETT
T ss_pred ceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcch
Confidence 332211
Q ss_pred -------------------------------CCC------------------------------------------CCcc
Q 004195 226 -------------------------------DLR------------------------------------------NLKN 232 (769)
Q Consensus 226 -------------------------------~l~------------------------------------------~l~~ 232 (769)
.+. .+++
T Consensus 269 ~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 348 (570)
T 2z63_A 269 YYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPS 348 (570)
T ss_dssp EEESCSTTTTGGGTTCSEEEEESCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTT
T ss_pred hhhhhchhhhcCcCcccEEEecCccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCC
Confidence 111 1222
Q ss_pred CcEEeccCCcCCCCC--cc---cccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCC-ccCCCCCCCCEE
Q 004195 233 LRVFDVQDNYFGPRF--PR---LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFI-PSLLSLPSITYL 306 (769)
Q Consensus 233 L~~l~l~~N~l~~~~--p~---~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L 306 (769)
|+.|++++|.+++.. |. .+++|++|++++|.+.+ + |..+..+++|++|++++|.+.+..+ ..+.++++|+.|
T Consensus 349 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~-~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 426 (570)
T 2z63_A 349 LEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-M-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 426 (570)
T ss_dssp CCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEE-E-EEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEE
T ss_pred CCEEeCcCCccCccccccccccccCccCEEECCCCcccc-c-cccccccCCCCEEEccCCccccccchhhhhcCCCCCEE
Confidence 222233333222211 11 12455556666665553 2 3348889999999999999998766 468999999999
Q ss_pred EccCCcCCccccccCCCCCCCcEEEccCCcCC-CCCCccccccCCCceEECCCCCCChhh
Q 004195 307 DIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT-GYLPSCLQVEAKTRLVLYSKNCLSNEE 365 (769)
Q Consensus 307 ~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~-g~~p~~~~~~~~l~~l~l~~N~l~~~~ 365 (769)
++++|.+++..|..+..+++|+.|++++|.++ +.+|..+..+++++.+++++|.+++..
T Consensus 427 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~ 486 (570)
T 2z63_A 427 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLS 486 (570)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEEC
T ss_pred eCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCC
Confidence 99999999999999999999999999999998 789999999999999999999998754
No 287
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.4e-27 Score=266.96 Aligned_cols=226 Identities=21% Similarity=0.186 Sum_probs=187.6
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
++|+.|+|++|++++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 57899999999999999999999999999999999999988899999999999999999999877788999999999999
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccccCCC--CCCCccCcEEeccCCcCCCCCccc--ccCCcEEEeCCccccCC
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYFGPRFPRL--HKKMVTLVLRNNRFQFG 267 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~--l~~l~~L~~l~l~~N~l~~~~p~~--~~~L~~L~l~~N~~~~~ 267 (769)
++|.++...+..|.++++|+.|++++|+..+.++. +..+++|+.|++++|.+++. |.. +.+|+.|+|++|.+++.
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPEI 233 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSEE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCccc
Confidence 99999988888999999999999999655555553 88899999999999988753 433 45677777777777754
Q ss_pred cCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCC
Q 004195 268 LNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTG 339 (769)
Q Consensus 268 i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g 339 (769)
. |..|..+++|+.|+|++|++++..+..|.++++|+.|+|++|++++..+..+..+++|+.|+|++|.+..
T Consensus 234 ~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 234 R-PGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp C-GGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred C-cccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 3 6777777777777777777777777777777777777777777777666677777777777777776653
No 288
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=5.4e-28 Score=279.78 Aligned_cols=276 Identities=18% Similarity=0.132 Sum_probs=230.3
Q ss_pred CeeEEEeCCCCCCCCC------------CCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeecc
Q 004195 77 NLTQLHIAGDNNNNIN------------GGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLS 144 (769)
Q Consensus 77 ~v~~l~l~~~~~~~~~------------~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls 144 (769)
+++.+++.++.+..++ .++++|.+.+..+..|+.+++|++|+|++|.+++..|..|+++++|++|+|+
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 4567777766443322 3456677777778899999999999999999999888999999999999999
Q ss_pred CcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccc--
Q 004195 145 SNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSG-- 222 (769)
Q Consensus 145 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~-- 222 (769)
+|.|++..+..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++.. ++.+++|+.|++++|.+++
T Consensus 132 ~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l~ 208 (597)
T 3oja_B 132 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLA 208 (597)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEEE
T ss_pred CCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccccc
Confidence 99999766666799999999999999999999999999999999999999999753 3445566666666555544
Q ss_pred -----------------cCCCCCCCccCcEEeccCCcCCCCCcc--cccCCcEEEeCCccccCCcCchhhcCCCcCcEEe
Q 004195 223 -----------------EIPDLRNLKNLRVFDVQDNYFGPRFPR--LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLD 283 (769)
Q Consensus 223 -----------------~~p~l~~l~~L~~l~l~~N~l~~~~p~--~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~ 283 (769)
..+.+ .++|+.|++++|.+++. +. .+++|+.|+|++|.+++.. |..+..+++|+.|+
T Consensus 209 ~~~~L~~L~ls~n~l~~~~~~~--~~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~ 284 (597)
T 3oja_B 209 IPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIM-YHPFVKMQRLERLY 284 (597)
T ss_dssp CCTTCSEEECCSSCCCEEECSC--CSCCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEE-SGGGTTCSSCCEEE
T ss_pred CCchhheeeccCCccccccccc--CCCCCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCCCC-HHHhcCccCCCEEE
Confidence 22222 35899999999999874 32 2679999999999999765 89999999999999
Q ss_pred ccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 284 ISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 284 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
|++|.+++ +|..+..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.+++.. +..+++++.+++++|.+++
T Consensus 285 Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 285 ISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDC 359 (597)
T ss_dssp CTTSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEH
T ss_pred CCCCCCCC-CCcccccCCCCcEEECCCCCCCc-cCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCC
Confidence 99999998 57778889999999999999995 6777888999999999999999764 4566789999999998876
Q ss_pred h
Q 004195 364 E 364 (769)
Q Consensus 364 ~ 364 (769)
.
T Consensus 360 ~ 360 (597)
T 3oja_B 360 N 360 (597)
T ss_dssp H
T ss_pred h
Confidence 4
No 289
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.96 E-value=4.3e-28 Score=278.28 Aligned_cols=286 Identities=24% Similarity=0.235 Sum_probs=214.9
Q ss_pred CeeEEEeCCCCCCCCC------------CCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeecc
Q 004195 77 NLTQLHIAGDNNNNIN------------GGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLS 144 (769)
Q Consensus 77 ~v~~l~l~~~~~~~~~------------~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls 144 (769)
+++.|+++++.+.... .++++|.+.+..+..|+++++|++|+|++|.+++..|..|+++++|++|+|+
T Consensus 27 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 106 (549)
T 2z81_A 27 AMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLM 106 (549)
T ss_dssp TCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECT
T ss_pred CccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECC
Confidence 5888888887654321 2345577777777888999999999999999988777779999999999999
Q ss_pred CcccCC-cCCccccCCCcCCEEEcccCcCCccCC-ccCcCCcCCCEEeccCCCCcccCCccccC----------------
Q 004195 145 SNYLSG-SIPVQISSLRNLQTLILDDNKFTGAVP-SELSLLQVLSVLSLKNNSLSGFLPVSLTG---------------- 206 (769)
Q Consensus 145 ~N~l~g-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~---------------- 206 (769)
+|.+++ .+|..|+++++|++|+|++|++.+.+| ..|.++++|++|+|++|.+++.+|..+++
T Consensus 107 ~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~ 186 (549)
T 2z81_A 107 GNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAF 186 (549)
T ss_dssp TCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTT
T ss_pred CCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccc
Confidence 999886 467788899999999999988544554 67888888888888888888877776654
Q ss_pred --------CCCCCEEEccCccccccC------------------------------------------------------
Q 004195 207 --------LQSLRVVSLSANHLSGEI------------------------------------------------------ 224 (769)
Q Consensus 207 --------l~~L~~L~ls~N~l~~~~------------------------------------------------------ 224 (769)
+++|++|++++|++++..
T Consensus 187 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~ 266 (549)
T 2z81_A 187 LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGL 266 (549)
T ss_dssp HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECC
T ss_pred cchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhcccccccccccccccc
Confidence 556777777777766521
Q ss_pred -----------------------------------------------------------CC-C-CCCccCcEEeccCCcC
Q 004195 225 -----------------------------------------------------------PD-L-RNLKNLRVFDVQDNYF 243 (769)
Q Consensus 225 -----------------------------------------------------------p~-l-~~l~~L~~l~l~~N~l 243 (769)
|. + ..+++|+.|++++|.+
T Consensus 267 ~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l 346 (549)
T 2z81_A 267 GDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLM 346 (549)
T ss_dssp SCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCC
T ss_pred ccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCcc
Confidence 00 0 2367788899999988
Q ss_pred CCCCcc------cccCCcEEEeCCccccCCc-CchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCcc
Q 004195 244 GPRFPR------LHKKMVTLVLRNNRFQFGL-NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGL 316 (769)
Q Consensus 244 ~~~~p~------~~~~L~~L~l~~N~~~~~i-~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 316 (769)
.+.+|. .+++|+.|+|++|.+++.. .+..+..+++|++|++++|+++ .+|..+..+++|++|++++|++++.
T Consensus 347 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l 425 (549)
T 2z81_A 347 VEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVV 425 (549)
T ss_dssp CHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCC
T ss_pred ccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccc
Confidence 876542 2568889999999887431 0145788888999999999888 4677777777777777777777643
Q ss_pred ccc-----------------cCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCChhh
Q 004195 317 LLQ-----------------NMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEE 365 (769)
Q Consensus 317 ~~~-----------------~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~~ 365 (769)
... ....+++|+.|+|++|+++ .+|. ...+++++.+++++|.+++.+
T Consensus 426 ~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~ 489 (549)
T 2z81_A 426 KTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVP 489 (549)
T ss_dssp CTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCC
T ss_pred cchhcCCceEEECCCCChhhhcccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcC
Confidence 211 1136788999999999998 6676 356788999999999988654
No 290
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.9e-28 Score=259.32 Aligned_cols=230 Identities=23% Similarity=0.200 Sum_probs=177.7
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCC--cCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEE
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSG--SIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVL 189 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 189 (769)
++|+.|+|++|+++...+..|.++++|++|+|++|.++. ..|..+..+++|++|+|++|.++ .+|..+..+++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 578999999999975555568899999999999999883 34677888999999999999987 577778899999999
Q ss_pred eccCCCCcccCC-ccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCC
Q 004195 190 SLKNNSLSGFLP-VSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFG 267 (769)
Q Consensus 190 ~L~~N~l~~~~p-~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~ 267 (769)
+|++|.+++..+ ..+.++++|++|++++|.+++.++. +..+++|+.|++++|.+.+ .
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~---------------------~ 165 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE---------------------N 165 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGG---------------------G
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccc---------------------c
Confidence 999999987655 6788899999999999998877765 6677777777777766543 1
Q ss_pred cCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccc
Q 004195 268 LNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQV 347 (769)
Q Consensus 268 i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~ 347 (769)
..|..+..+++|++|+|++|.+++..|..+..+++|+.|+|++|++++..+..+..+++|+.|++++|++++..|..+..
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 245 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQH 245 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCC
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHh
Confidence 12556666777777777777777766777777777777777777777766666777777777777777777777777666
Q ss_pred c-CCCceEECCCCCCCh
Q 004195 348 E-AKTRLVLYSKNCLSN 363 (769)
Q Consensus 348 ~-~~l~~l~l~~N~l~~ 363 (769)
+ ++++.+++++|.+++
T Consensus 246 ~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 246 FPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CCTTCCEEECTTCCEEC
T ss_pred hhccCCEEEccCCCeec
Confidence 6 367777777777654
No 291
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.6e-28 Score=265.35 Aligned_cols=252 Identities=16% Similarity=0.129 Sum_probs=202.8
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..+..|+++++|++|+|
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 47899999999998777778999999999999999999877888999999999999999998655555889999999999
Q ss_pred cCCCCcccCC-ccccCCCCCCEEEccCcc-ccccCC-CCCCCccCcEEeccCCcCCCCCccc---ccCCcEEEeCCcccc
Q 004195 192 KNNSLSGFLP-VSLTGLQSLRVVSLSANH-LSGEIP-DLRNLKNLRVFDVQDNYFGPRFPRL---HKKMVTLVLRNNRFQ 265 (769)
Q Consensus 192 ~~N~l~~~~p-~~l~~l~~L~~L~ls~N~-l~~~~p-~l~~l~~L~~l~l~~N~l~~~~p~~---~~~L~~L~l~~N~~~ 265 (769)
++|++++..+ ..+.++++|++|++++|+ +++..+ .+..+++|+.|++++|.+++..|.. +++|++|++++|.+.
T Consensus 132 ~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 132 LGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred CCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 9999986444 478889999999999984 665544 4788899999999999988776654 457888999999886
Q ss_pred CCcCchhhcCCCcCcEEeccCccccccCCccCC---CCCCCCEEEccCCcCCc----cccccCCCCCCCcEEEccCCcCC
Q 004195 266 FGLNPDELRSYNQLQKLDISLNRFVGPFIPSLL---SLPSITYLDIHGNKLTG----LLLQNMSCNPQLAFVDLSSNLLT 338 (769)
Q Consensus 266 ~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~l~~L~~L~l~~N~l~~----~~~~~~~~l~~L~~l~l~~N~l~ 338 (769)
.+++..+..+++|++|++++|.+++..+..+. ..+.++.++|++|.+++ .+|..+..+++|+.|++++|+++
T Consensus 212 -~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~ 290 (353)
T 2z80_A 212 -LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK 290 (353)
T ss_dssp -THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC
T ss_pred -cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC
Confidence 44234456688999999999999886655443 45678889999998887 36777888999999999999999
Q ss_pred CCCCccccccCCCceEECCCCCCChh
Q 004195 339 GYLPSCLQVEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 339 g~~p~~~~~~~~l~~l~l~~N~l~~~ 364 (769)
...+..+..+++++.+++++|.+.+.
T Consensus 291 ~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 291 SVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 44444457888999999999987654
No 292
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=2.5e-27 Score=263.94 Aligned_cols=225 Identities=24% Similarity=0.232 Sum_probs=178.7
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
++++.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 67899999999999988899999999999999999999888889999999999999999999777778999999999999
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccccCCC--CCCCccCcEEeccCCcCCCCCccc--ccCCcEEEeCCccccCC
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD--LRNLKNLRVFDVQDNYFGPRFPRL--HKKMVTLVLRNNRFQFG 267 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~--l~~l~~L~~l~l~~N~l~~~~p~~--~~~L~~L~l~~N~~~~~ 267 (769)
++|.++...+..|.++++|+.|+|++|+..+.++. +..+++|+.|++++|.++. +|.. +.+|+.|+|++|.+++.
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPNLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CCCCTTCSSCCEEECTTSCCCEE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-ccccCCCcccCEEECCCCccCcc
Confidence 99999988888999999999999999665555553 8889999999999998873 3332 34666666666666643
Q ss_pred cCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCC
Q 004195 268 LNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338 (769)
Q Consensus 268 i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 338 (769)
.|..|..+++|+.|+|++|++++..+..|.++++|+.|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 223 -~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 223 -RPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp -CTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred -ChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 3566666666666666666666666666666666666666666666666666666666666666666654
No 293
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=2.8e-29 Score=266.33 Aligned_cols=245 Identities=24% Similarity=0.224 Sum_probs=148.2
Q ss_pred CCCCCCcEEEeecccccCCCCccccCCCcCceeeccCccc-CCcCCcccc-------CCCcCCEEEcccCcCCccCCccC
Q 004195 109 GSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYL-SGSIPVQIS-------SLRNLQTLILDDNKFTGAVPSEL 180 (769)
Q Consensus 109 ~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l-~g~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~~ 180 (769)
+.+++|+.|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 3445555555555555 455444433 55555555555 334454444 45555566666665555555554
Q ss_pred --cCCcCCCEEeccCCCCcccCCccccCC-----CCCCEEEccCccccccCC-CCCCCccCcEEeccCCcCCCCC--c--
Q 004195 181 --SLLQVLSVLSLKNNSLSGFLPVSLTGL-----QSLRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYFGPRF--P-- 248 (769)
Q Consensus 181 --~~l~~L~~L~L~~N~l~~~~p~~l~~l-----~~L~~L~ls~N~l~~~~p-~l~~l~~L~~l~l~~N~l~~~~--p-- 248 (769)
..+++|++|+|++|++++. |..++++ ++|++|+|++|++++.+| .++.+++|+.|++++|.+.+.+ |
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 5555566666666655554 5555544 555666666665555543 3555555666666655554431 1
Q ss_pred ---ccccCCcEEEeCCccccC--CcCchhhcCCCcCcEEeccCccccccCC-ccCCCCCCCCEEEccCCcCCccccccCC
Q 004195 249 ---RLHKKMVTLVLRNNRFQF--GLNPDELRSYNQLQKLDISLNRFVGPFI-PSLLSLPSITYLDIHGNKLTGLLLQNMS 322 (769)
Q Consensus 249 ---~~~~~L~~L~l~~N~~~~--~i~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 322 (769)
..+++|++|+|++|.+++ .+....+..+++|++|+|++|++++.+| +.+..+++|+.|+|++|+++ .+|..+.
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~ 273 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP 273 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc
Confidence 223456666666666652 1212334567788888888888887664 45666778888888888887 4566555
Q ss_pred CCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 323 CNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 323 ~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
++|+.|||++|++++. |. +..+++++.+++++|.+++
T Consensus 274 --~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 --AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp --SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred --CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 7788888888888876 55 6677778888888887764
No 294
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=1.3e-27 Score=262.01 Aligned_cols=251 Identities=18% Similarity=0.171 Sum_probs=197.2
Q ss_pred CCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEE
Q 004195 110 SLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVL 189 (769)
Q Consensus 110 ~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 189 (769)
.+++|++|++++|.++...+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..|+++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 47899999999999976555668999999999999999998888899999999999999999998888999999999999
Q ss_pred eccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCc
Q 004195 190 SLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGL 268 (769)
Q Consensus 190 ~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i 268 (769)
+|++|.++...+..|.++++|++|++++|++++..+. +..+++|+.|++++|.+++.....+++|+.|++++|.+++.-
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~ 202 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLA 202 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEE
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccC
Confidence 9999999966556679999999999999999988775 899999999999999998765555566666666666554311
Q ss_pred Cchh---------------hcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEcc
Q 004195 269 NPDE---------------LRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLS 333 (769)
Q Consensus 269 ~p~~---------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 333 (769)
.|.. ....++|+.|++++|.+++. +.+..+++|+.|+|++|.+++..|..+..+++|+.|+|+
T Consensus 203 ~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 280 (390)
T 3o6n_A 203 IPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYIS 280 (390)
T ss_dssp CCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECC
T ss_pred CCCcceEEECCCCeeeeccccccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECC
Confidence 0110 01234677777777777652 556677777777777777777777777777777777777
Q ss_pred CCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 334 SNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 334 ~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
+|++++ +|..+..+++++.+++++|.++.
T Consensus 281 ~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~ 309 (390)
T 3o6n_A 281 NNRLVA-LNLYGQPIPTLKVLDLSHNHLLH 309 (390)
T ss_dssp SSCCCE-EECSSSCCTTCCEEECCSSCCCC
T ss_pred CCcCcc-cCcccCCCCCCCEEECCCCccee
Confidence 777765 34445556677777777777653
No 295
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.9e-29 Score=267.65 Aligned_cols=228 Identities=21% Similarity=0.228 Sum_probs=197.0
Q ss_pred cccccCCCCCCcEEEeecccc-cCCCCcccc-------CCCcCceeeccCcccCCcCCccc--cCCCcCCEEEcccCcCC
Q 004195 104 FFSTLGSLSSLKVLSLVSLGL-WGPLPGSIA-------HSSSLEILNLSSNYLSGSIPVQI--SSLRNLQTLILDDNKFT 173 (769)
Q Consensus 104 ~~~~~~~l~~L~~L~L~~n~l-~g~~p~~~~-------~l~~L~~L~Ls~N~l~g~~p~~~--~~l~~L~~L~L~~N~l~ 173 (769)
+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..+ +.+++|++|+|++|+++
T Consensus 57 ~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 134 (312)
T 1wwl_A 57 DLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWA 134 (312)
T ss_dssp CCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCS
T ss_pred cHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCc
Confidence 34444444 89999999999 467888776 89999999999999999999987 89999999999999999
Q ss_pred ccCCccCcCC-----cCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccC---CCC--CCCccCcEEeccCCcC
Q 004195 174 GAVPSELSLL-----QVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEI---PDL--RNLKNLRVFDVQDNYF 243 (769)
Q Consensus 174 ~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~---p~l--~~l~~L~~l~l~~N~l 243 (769)
+. |..++.+ ++|++|+|++|++++..|..|+++++|++|+|++|++++.+ +.+ ..+++|+.|++++|.+
T Consensus 135 ~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l 213 (312)
T 1wwl_A 135 TR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGM 213 (312)
T ss_dssp SS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCC
T ss_pred ch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcC
Confidence 77 8888887 99999999999999988899999999999999999998752 334 8899999999999999
Q ss_pred CC--CCcc----cccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccc
Q 004195 244 GP--RFPR----LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLL 317 (769)
Q Consensus 244 ~~--~~p~----~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 317 (769)
++ .++. .+++|+.|+|++|.+++.++...+..+++|++|+|++|+++ .+|..+. ++|+.|+|++|++++.
T Consensus 214 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~- 289 (312)
T 1wwl_A 214 ETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN- 289 (312)
T ss_dssp CCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-
T ss_pred cchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-
Confidence 84 2222 24799999999999997652256777899999999999998 6777776 8999999999999997
Q ss_pred cccCCCCCCCcEEEccCCcCCC
Q 004195 318 LQNMSCNPQLAFVDLSSNLLTG 339 (769)
Q Consensus 318 ~~~~~~l~~L~~l~l~~N~l~g 339 (769)
|. +..+++|+.|++++|++++
T Consensus 290 p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 290 PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CC-TTTSCEEEEEECTTCTTTC
T ss_pred hh-HhhCCCCCEEeccCCCCCC
Confidence 55 8999999999999999986
No 296
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=1.3e-27 Score=252.76 Aligned_cols=224 Identities=20% Similarity=0.203 Sum_probs=188.8
Q ss_pred EEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCc--cCCccCcCCcCCCEEeccC
Q 004195 116 VLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTG--AVPSELSLLQVLSVLSLKN 193 (769)
Q Consensus 116 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~ 193 (769)
.++.++++++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|+++. ..|..+..+++|++|+|++
T Consensus 11 ~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 4566666664 3555443 689999999999995444558999999999999999873 3467788899999999999
Q ss_pred CCCcccCCccccCCCCCCEEEccCccccccCC--CCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCch
Q 004195 194 NSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP--DLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPD 271 (769)
Q Consensus 194 N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p--~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~ 271 (769)
|.++ .+|..+.++++|++|++++|++++..+ .+..+++|+.|++++|.+. +.. +.
T Consensus 88 n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~---------------------~~~-~~ 144 (306)
T 2z66_A 88 NGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR---------------------VAF-NG 144 (306)
T ss_dssp CSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCE---------------------ECS-TT
T ss_pred Cccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCC---------------------ccc-hh
Confidence 9998 467779999999999999999987654 4777777777777776654 222 66
Q ss_pred hhcCCCcCcEEeccCccccc-cCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCC
Q 004195 272 ELRSYNQLQKLDISLNRFVG-PFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAK 350 (769)
Q Consensus 272 ~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~ 350 (769)
.+..+++|++|++++|.+.+ .+|..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++..+..+..+++
T Consensus 145 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 224 (306)
T 2z66_A 145 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNS 224 (306)
T ss_dssp TTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTT
T ss_pred hcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCccc
Confidence 78889999999999999987 67888999999999999999999999999999999999999999999988888888999
Q ss_pred CceEECCCCCCChhh
Q 004195 351 TRLVLYSKNCLSNEE 365 (769)
Q Consensus 351 l~~l~l~~N~l~~~~ 365 (769)
++.+++++|.+++..
T Consensus 225 L~~L~L~~N~l~~~~ 239 (306)
T 2z66_A 225 LQVLDYSLNHIMTSK 239 (306)
T ss_dssp CCEEECTTSCCCBCS
T ss_pred CCEeECCCCCCcccC
Confidence 999999999998754
No 297
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=4.9e-27 Score=245.73 Aligned_cols=209 Identities=22% Similarity=0.237 Sum_probs=171.6
Q ss_pred CCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCc-CCccCCccCcCCcCCCEE
Q 004195 111 LSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNK-FTGAVPSELSLLQVLSVL 189 (769)
Q Consensus 111 l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L 189 (769)
.++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|. ++...|..|..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 3588999999999988777889999999999999999998888899999999999999997 776668889999999999
Q ss_pred eccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCc
Q 004195 190 SLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGL 268 (769)
Q Consensus 190 ~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i 268 (769)
+|++|.+++..|..|.++++|++|++++|++++..+. +..+++|+.|++++|.++ .+
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~----------------------~~ 168 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS----------------------SV 168 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC----------------------EE
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccc----------------------cc
Confidence 9999999988888899999999999999998876655 677777777777777654 22
Q ss_pred CchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCC
Q 004195 269 NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYL 341 (769)
Q Consensus 269 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~ 341 (769)
.+..+..+++|++|+|++|.+++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++|.+++..
T Consensus 169 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 241 (285)
T 1ozn_A 169 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDC 241 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred CHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCC
Confidence 2445677778888888888888877778888888888888888888776677777888888888888776543
No 298
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=5.8e-27 Score=261.90 Aligned_cols=242 Identities=19% Similarity=0.128 Sum_probs=216.3
Q ss_pred cEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCC
Q 004195 115 KVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194 (769)
Q Consensus 115 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 194 (769)
+.++.++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 45666666664 4666554 68999999999999988999999999999999999999999999999999999999999
Q ss_pred CCcccCCccccCCCCCCEEEccCccccccCC-CCCCCccCcEEeccCCcCCCCCcc----cccCCcEEEeCCccccCCcC
Q 004195 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYFGPRFPR----LHKKMVTLVLRNNRFQFGLN 269 (769)
Q Consensus 195 ~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p-~l~~l~~L~~l~l~~N~l~~~~p~----~~~~L~~L~l~~N~~~~~i~ 269 (769)
.+++..+..|.++++|++|+|++|++++..+ .+.++++|+.|++++|...+.++. .+.+|+.|+|++|.+++ +
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~- 211 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-M- 211 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-C-
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-c-
Confidence 9998888889999999999999999997666 388999999999999655444443 35789999999999985 3
Q ss_pred chhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccC
Q 004195 270 PDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEA 349 (769)
Q Consensus 270 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~ 349 (769)
| .+..+++|++|+|++|.+++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..++
T Consensus 212 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 290 (452)
T 3zyi_A 212 P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290 (452)
T ss_dssp C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT
T ss_pred c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc
Confidence 3 588999999999999999999999999999999999999999999999999999999999999999998888889999
Q ss_pred CCceEECCCCCCC
Q 004195 350 KTRLVLYSKNCLS 362 (769)
Q Consensus 350 ~l~~l~l~~N~l~ 362 (769)
+++.+++++|.+.
T Consensus 291 ~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 291 YLVELHLHHNPWN 303 (452)
T ss_dssp TCCEEECCSSCEE
T ss_pred CCCEEEccCCCcC
Confidence 9999999999654
No 299
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.95 E-value=1e-26 Score=250.62 Aligned_cols=243 Identities=20% Similarity=0.261 Sum_probs=198.0
Q ss_pred cCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCC
Q 004195 108 LGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187 (769)
Q Consensus 108 ~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 187 (769)
+.++++|++|+|++|.++. + +.+.++++|++|+|++|.+++ +|. +..+++|++|++++|.....++ .+..+++|+
T Consensus 84 ~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~ 158 (347)
T 4fmz_A 84 LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRELYLNEDNISD-ISP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLN 158 (347)
T ss_dssp GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSEEECTTSCCCC-CGG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCC
T ss_pred hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCEEECcCCcccC-chh-hccCCceeEEECCCCCCccccc-chhhCCCCc
Confidence 7888999999999998876 3 368899999999999999985 444 8889999999999997664444 488899999
Q ss_pred EEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCc-ccccCCcEEEeCCccccC
Q 004195 188 VLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFP-RLHKKMVTLVLRNNRFQF 266 (769)
Q Consensus 188 ~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p-~~~~~L~~L~l~~N~~~~ 266 (769)
+|++++|.+++..+ +.++++|+.|++++|.+++..+ +..+++|+.+++++|.+.+..+ ..+++|+.|++++|.++.
T Consensus 159 ~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~n~l~~ 235 (347)
T 4fmz_A 159 YLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP-LASLTSLHYFTAYVNQITDITPVANMTRLNSLKIGNNKITD 235 (347)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCC
T ss_pred EEEecCCCcCCchh--hccCCCCCEEEccCCccccccc-ccCCCccceeecccCCCCCCchhhcCCcCCEEEccCCccCC
Confidence 99999998886544 7888999999999998876444 7888889999999998876654 235788899999998875
Q ss_pred CcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCcccc
Q 004195 267 GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQ 346 (769)
Q Consensus 267 ~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~ 346 (769)
. +. +..+++|++|++++|.+++. +.+..+++|+.|++++|++++. ..+..+++|+.|++++|.+++..|..+.
T Consensus 236 ~--~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 308 (347)
T 4fmz_A 236 L--SP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIG 308 (347)
T ss_dssp C--GG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHH
T ss_pred C--cc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhh
Confidence 3 33 88888899999999888773 5688888899999999988875 4577888899999999988888888888
Q ss_pred ccCCCceEECCCCCCChhh
Q 004195 347 VEAKTRLVLYSKNCLSNEE 365 (769)
Q Consensus 347 ~~~~l~~l~l~~N~l~~~~ 365 (769)
.+++++.+++++|.+++..
T Consensus 309 ~l~~L~~L~L~~n~l~~~~ 327 (347)
T 4fmz_A 309 GLTNLTTLFLSQNHITDIR 327 (347)
T ss_dssp TCTTCSEEECCSSSCCCCG
T ss_pred ccccCCEEEccCCcccccc
Confidence 8888889999988887654
No 300
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.1e-26 Score=258.75 Aligned_cols=242 Identities=19% Similarity=0.155 Sum_probs=215.8
Q ss_pred cEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCC
Q 004195 115 KVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194 (769)
Q Consensus 115 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 194 (769)
+.++.++++++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 46 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 46 SKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp CEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 34555566663 4676554 68999999999999988899999999999999999999888899999999999999999
Q ss_pred CCcccCCccccCCCCCCEEEccCccccccCC-CCCCCccCcEEeccCCcCCCCCcc----cccCCcEEEeCCccccCCcC
Q 004195 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYFGPRFPR----LHKKMVTLVLRNNRFQFGLN 269 (769)
Q Consensus 195 ~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p-~l~~l~~L~~l~l~~N~l~~~~p~----~~~~L~~L~l~~N~~~~~i~ 269 (769)
++++..+..|.++++|++|+|++|++++..+ .+..+++|+.|++++|...+.++. .+.+|+.|+|++|.++ .+
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~- 200 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EI- 200 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SC-
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cc-
Confidence 9998777889999999999999999997766 488999999999999655554443 2578999999999998 44
Q ss_pred chhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccC
Q 004195 270 PDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEA 349 (769)
Q Consensus 270 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~ 349 (769)
| .+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..++
T Consensus 201 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 279 (440)
T 3zyj_A 201 P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 279 (440)
T ss_dssp C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCT
T ss_pred c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcccc
Confidence 4 588999999999999999999899999999999999999999999999999999999999999999998888889999
Q ss_pred CCceEECCCCCCC
Q 004195 350 KTRLVLYSKNCLS 362 (769)
Q Consensus 350 ~l~~l~l~~N~l~ 362 (769)
+++.+++++|.+.
T Consensus 280 ~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 280 HLERIHLHHNPWN 292 (440)
T ss_dssp TCCEEECCSSCEE
T ss_pred CCCEEEcCCCCcc
Confidence 9999999999764
No 301
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.95 E-value=2.4e-26 Score=247.67 Aligned_cols=239 Identities=20% Similarity=0.286 Sum_probs=128.3
Q ss_pred cCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCC
Q 004195 108 LGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187 (769)
Q Consensus 108 ~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 187 (769)
+..+++|++|+|++|.+++. |. +.++++|++|+|++|.++. +| .|.++++|++|+|++|.+++. |. +..+++|+
T Consensus 62 ~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~n~i~~~-~~-~~~l~~L~ 135 (347)
T 4fmz_A 62 IEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNEDNISDI-SP-LANLTKMY 135 (347)
T ss_dssp GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTTSCCCCC-GG-GTTCTTCC
T ss_pred hhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcCCcccCc-hh-hccCCcee
Confidence 44555666666666655433 22 5556666666666665553 22 455566666666666655532 22 55556666
Q ss_pred EEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCc-ccccCCcEEEeCCccccC
Q 004195 188 VLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFP-RLHKKMVTLVLRNNRFQF 266 (769)
Q Consensus 188 ~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p-~~~~~L~~L~l~~N~~~~ 266 (769)
+|++++|.....++ .+.++++|++|++++|.+.+..+ +..+++|+.|++++|.+.+..+ ..+.+|+.|++++|.+..
T Consensus 136 ~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~ 213 (347)
T 4fmz_A 136 SLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP-IANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITD 213 (347)
T ss_dssp EEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCSEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCC
T ss_pred EEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh-hccCCCCCEEEccCCcccccccccCCCccceeecccCCCCC
Confidence 66666654443332 25555666666666665554333 5555566666666665554332 123455566666665553
Q ss_pred CcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCcccc
Q 004195 267 GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQ 346 (769)
Q Consensus 267 ~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~ 346 (769)
.. + +..+++|++|++++|.+++..+ +..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++. +.+.
T Consensus 214 ~~-~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~ 284 (347)
T 4fmz_A 214 IT-P--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLN 284 (347)
T ss_dssp CG-G--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGG
T ss_pred Cc-h--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhc
Confidence 21 1 5555566666666665554322 55555666666666655553 3455555666666666655543 2344
Q ss_pred ccCCCceEECCCCCCCh
Q 004195 347 VEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 347 ~~~~l~~l~l~~N~l~~ 363 (769)
.+++++.+++++|.+++
T Consensus 285 ~l~~L~~L~L~~n~l~~ 301 (347)
T 4fmz_A 285 NLSQLNSLFLNNNQLGN 301 (347)
T ss_dssp GCTTCSEEECCSSCCCG
T ss_pred CCCCCCEEECcCCcCCC
Confidence 55555666666665544
No 302
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.95 E-value=1.9e-26 Score=257.03 Aligned_cols=254 Identities=22% Similarity=0.193 Sum_probs=166.3
Q ss_pred CCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCcc
Q 004195 76 DNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQ 155 (769)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 155 (769)
.+++.|+++++.+.+. | .++.+++|++|+|++|++++. | ++++++|++|+|++|++++. |
T Consensus 42 ~~L~~L~Ls~n~l~~~-------------~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~-- 101 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-------------T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D-- 101 (457)
T ss_dssp TTCCEEECCSSCCCCC-------------T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--
T ss_pred CCCCEEEccCCCcccC-------------h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--
Confidence 4677888776654421 2 466677777777777777663 3 77777777777777777753 3
Q ss_pred ccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcE
Q 004195 156 ISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRV 235 (769)
Q Consensus 156 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~ 235 (769)
++++++|++|+|++|++++ +| ++.+++|++|++++|++++. + ++++++|++|++++|+..+.+ .+..+++|+.
T Consensus 102 ~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~-~~~~l~~L~~ 174 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL-DVTPQTQLTT 174 (457)
T ss_dssp CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC-CCTTCTTCCE
T ss_pred cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc-ccccCCcCCE
Confidence 7777777777777777775 34 67777777777777777763 2 667777777777777655555 4666777777
Q ss_pred EeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCc
Q 004195 236 FDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTG 315 (769)
Q Consensus 236 l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 315 (769)
|++++|.+++.....+++|+.|++++|.+++. .+..+++|++|++++|++++ +| +..+++|+.|++++|++++
T Consensus 175 L~ls~n~l~~l~l~~l~~L~~L~l~~N~l~~~----~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 175 LDCSFNKITELDVSQNKLLNRLNCDTNNITKL----DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp EECCSSCCCCCCCTTCTTCCEEECCSSCCSCC----CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC
T ss_pred EECCCCccceeccccCCCCCEEECcCCcCCee----ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCC
Confidence 77777777664333356677777777777642 26667777777777777776 33 6667777777777777777
Q ss_pred cccccCCCCC-------CCcEEEccCCcCCCCCCccccccCCCceEECCCCCCChhh
Q 004195 316 LLLQNMSCNP-------QLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEE 365 (769)
Q Consensus 316 ~~~~~~~~l~-------~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~~ 365 (769)
..+..+..+. +|+.|++++|.+.|.+| +..+++++.+++++|...+..
T Consensus 248 ~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l 302 (457)
T 3bz5_A 248 LDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLL 302 (457)
T ss_dssp CCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEE
T ss_pred cCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCccccee
Confidence 6544444433 44555555565555555 234556666666666554443
No 303
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.95 E-value=3.1e-26 Score=255.44 Aligned_cols=266 Identities=20% Similarity=0.185 Sum_probs=147.2
Q ss_pred CCeeEEEeCCCCCCCCC---------CCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCc
Q 004195 76 DNLTQLHIAGDNNNNIN---------GGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSN 146 (769)
Q Consensus 76 ~~v~~l~l~~~~~~~~~---------~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N 146 (769)
.+++.|+++++.+...+ .++++|.+.+. .++++++|++|+|++|++++ +| ++++++|++|++++|
T Consensus 64 ~~L~~L~Ls~n~l~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N 137 (457)
T 3bz5_A 64 TGLTKLICTSNNITTLDLSQNTNLTYLACDSNKLTNL---DVTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARN 137 (457)
T ss_dssp TTCSEEECCSSCCSCCCCTTCTTCSEEECCSSCCSCC---CCTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTS
T ss_pred CCCCEEEccCCcCCeEccccCCCCCEEECcCCCCcee---ecCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCC
Confidence 46888888887655421 12233333332 15555555555555555554 22 555555555555555
Q ss_pred ccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC
Q 004195 147 YLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD 226 (769)
Q Consensus 147 ~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~ 226 (769)
++++ +| ++++++|++|++++|+..+.+ .++.+++|++|++++|++++ +| ++.+++|+.|++++|++++. .
T Consensus 138 ~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--~ 207 (457)
T 3bz5_A 138 TLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--D 207 (457)
T ss_dssp CCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC--C
T ss_pred ccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee--c
Confidence 5554 22 555555555555555444344 25555566666666666554 23 55556666666666666553 3
Q ss_pred CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCC-------cCcEEeccCccccccCCccCCC
Q 004195 227 LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYN-------QLQKLDISLNRFVGPFIPSLLS 299 (769)
Q Consensus 227 l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~-------~L~~L~Ls~N~l~~~~~~~~~~ 299 (769)
++.+++|+.|++++|.+++.....+++|+.|++++|.+++. ++..+..+. +|+.|++++|.+.+.+| ++.
T Consensus 208 l~~l~~L~~L~Ls~N~l~~ip~~~l~~L~~L~l~~N~l~~~-~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~ 284 (457)
T 3bz5_A 208 LNQNIQLTFLDCSSNKLTEIDVTPLTQLTYFDCSVNPLTEL-DVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEG 284 (457)
T ss_dssp CTTCTTCSEEECCSSCCSCCCCTTCTTCSEEECCSSCCSCC-CCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTT
T ss_pred cccCCCCCEEECcCCcccccCccccCCCCEEEeeCCcCCCc-CHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccc
Confidence 55556666666666666553222245566666666666542 233333332 34445555555545444 345
Q ss_pred CCCCCEEEccCCcCCccccc--------cCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 300 LPSITYLDIHGNKLTGLLLQ--------NMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 300 l~~L~~L~l~~N~l~~~~~~--------~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
+++|+.|++++|.+.+.+|. .++.+++|+.|++++|++++. | +..+++++.+++++|++++
T Consensus 285 l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 285 CRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp CTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB
T ss_pred cccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC
Confidence 56666777777666555543 244556677777777777763 3 6666777777777777765
No 304
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.95 E-value=2.2e-26 Score=268.54 Aligned_cols=133 Identities=25% Similarity=0.241 Sum_probs=120.8
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
+++++|||++|+|++..|..|.++++|++|||++|+|++..|..|.+|++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 47899999999999888899999999999999999999888889999999999999999999888889999999999999
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCcccccc-CCC-CCCCccCcEEeccCCcCC
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGE-IPD-LRNLKNLRVFDVQDNYFG 244 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~-~p~-l~~l~~L~~l~l~~N~l~ 244 (769)
++|++++..+..|+++++|++|+|++|.+++. +|. ++.+++|+.|++++|.++
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 186 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 186 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccc
Confidence 99999988888999999999999999999764 444 677888888888877654
No 305
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=6.2e-29 Score=283.63 Aligned_cols=182 Identities=8% Similarity=0.049 Sum_probs=124.4
Q ss_pred CccccCCceeEEEEEe-CCCcEEEEEEccccCCC----------ChhHHHHHHHHHhhc-cCCceeeEeeeeeccCCCCC
Q 004195 486 SFMCDASHGQIYKGKL-TDGTLVAIRSLKMSKKS----------SPHMYTYHIELISKL-RHSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~----------~~~~~~~Ei~~l~~l-~H~nIv~l~~~~~~~~~~~~ 553 (769)
...+.|+.|.++.++. -.|+.||||.+...... ..++|.+|+++|+++ .|+||+++++++.+..
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~---- 315 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ---- 315 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS----
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC----
Confidence 3456677777777653 35899999999754211 124689999999999 6999999999998744
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCC
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNL 633 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGl 633 (769)
..||||||++|++|.+++.+.+ +++.. +|+.||+.||+|+|++ |||||||||+|||+++++++||+|||+
T Consensus 316 ---~~yLVMEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGl 385 (569)
T 4azs_A 316 ---SGWLVMEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGS 385 (569)
T ss_dssp ---EEEEEEECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTT
T ss_pred ---EEEEEEecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeeccc
Confidence 3899999999999999998665 56654 5889999999999999 999999999999999999999999999
Q ss_pred chhhhccC--CcceeecCCCcchhhhccCCCCCCCCeeehhHHHHHHHhCC
Q 004195 634 PLLAEARG--KGSAEVSSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVGR 682 (769)
Q Consensus 634 a~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG~ 682 (769)
|+...... ..+..++..|++||.+. +.+..++|+||+|++++++.++.
T Consensus 386 Ar~~~~~~~~~~t~vGTp~YmAPE~l~-g~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 386 IVTTPQDCSWPTNLVQSFFVFVNELFA-ENKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp EESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred CeeCCCCCccccCceechhhccHHHhC-CCCCCcccccccccchhhhcccc
Confidence 97654332 22334556677888775 46778999999999998886654
No 306
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.94 E-value=5.5e-26 Score=255.01 Aligned_cols=266 Identities=25% Similarity=0.311 Sum_probs=155.7
Q ss_pred CCeeEEEeCCCCCCCCC----------CCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccC
Q 004195 76 DNLTQLHIAGDNNNNIN----------GGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSS 145 (769)
Q Consensus 76 ~~v~~l~l~~~~~~~~~----------~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~ 145 (769)
.+++.|+++++.+...+ ..+++|.+.+..+ ++++++|++|+|++|.+++.. . +.++++|++|+|++
T Consensus 68 ~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~-~-~~~l~~L~~L~l~~ 143 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDID-P-LKNLTNLNRLELSS 143 (466)
T ss_dssp TTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG-G-GTTCTTCSEEEEEE
T ss_pred cCCCEEECCCCccCCchhhhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCCh-H-HcCCCCCCEEECCC
Confidence 46788888777654421 1223343333332 666666666666666665432 2 66666666666666
Q ss_pred cccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCC
Q 004195 146 NYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP 225 (769)
Q Consensus 146 N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 225 (769)
|.+++ +| .++.+++|+.|+++ |.+.+. + .+.++++|++|++++|.+++. ..+.++++|+.|++++|.+++..|
T Consensus 144 n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~-~-~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~ 216 (466)
T 1o6v_A 144 NTISD-IS-ALSGLTSLQQLSFG-NQVTDL-K-PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP 216 (466)
T ss_dssp EEECC-CG-GGTTCTTCSEEEEE-ESCCCC-G-GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CccCC-Ch-hhccCCcccEeecC-CcccCc-h-hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc
Confidence 66654 23 24444444444443 222221 1 266667777777777776643 246667777777777777766544
Q ss_pred CCCCCccCcEEeccCCcCCCCCcc--cccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCC
Q 004195 226 DLRNLKNLRVFDVQDNYFGPRFPR--LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSI 303 (769)
Q Consensus 226 ~l~~l~~L~~l~l~~N~l~~~~p~--~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 303 (769)
++.+++|+.|++++|.+.+. +. .+++|+.|++++|.+++.. + +..+++|++|++++|.+++..+ +..+++|
T Consensus 217 -~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~-~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L 289 (466)
T 1o6v_A 217 -LGILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISNLA-P--LSGLTKLTELKLGANQISNISP--LAGLTAL 289 (466)
T ss_dssp -GGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCG-G--GTTCTTCSEEECCSSCCCCCGG--GTTCTTC
T ss_pred -ccccCCCCEEECCCCCcccc-hhhhcCCCCCEEECCCCccccch-h--hhcCCCCCEEECCCCccCcccc--ccCCCcc
Confidence 56666677777777766543 22 2456666666666666432 2 6666666666666666665332 5666666
Q ss_pred CEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 304 TYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 304 ~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
+.|++++|++++..+ +..+++|+.|++++|++++..| +..+++++.+++++|.+++
T Consensus 290 ~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 290 TNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp SEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred CeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCC
Confidence 666666666666443 5566666666666666666554 4455666666666666554
No 307
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.94 E-value=6.5e-26 Score=254.40 Aligned_cols=269 Identities=23% Similarity=0.273 Sum_probs=205.6
Q ss_pred CeeEEEeCCCCCCCCC----------CCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCc
Q 004195 77 NLTQLHIAGDNNNNIN----------GGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSN 146 (769)
Q Consensus 77 ~v~~l~l~~~~~~~~~----------~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N 146 (769)
+++.|++.++.....+ .++++|.+.+..+ +.++++|++|+|++|.+++..| ++++++|++|+|++|
T Consensus 47 ~l~~L~l~~~~i~~l~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n 122 (466)
T 1o6v_A 47 QVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 122 (466)
T ss_dssp TCCEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred cccEEecCCCCCccCcchhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCC
Confidence 5677777665543321 2344454444433 6677777777777777765443 677777777777777
Q ss_pred ccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC
Q 004195 147 YLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD 226 (769)
Q Consensus 147 ~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~ 226 (769)
.+++. |. +.++++|++|+|++|.+++ +| .++.+++|++|+++ |.+.+.. .+.++++|+.|++++|.+++ ++.
T Consensus 123 ~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~-~~~ 194 (466)
T 1o6v_A 123 QITDI-DP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSD-ISV 194 (466)
T ss_dssp CCCCC-GG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCC-CGG
T ss_pred CCCCC-hH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCC-Chh
Confidence 77643 32 6777777777777777664 33 36677777777775 4444332 38899999999999999986 456
Q ss_pred CCCCccCcEEeccCCcCCCCCcc-cccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCE
Q 004195 227 LRNLKNLRVFDVQDNYFGPRFPR-LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITY 305 (769)
Q Consensus 227 l~~l~~L~~l~l~~N~l~~~~p~-~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 305 (769)
+..+++|+.|++++|.+.+..|- .+++|+.|++++|.++. + ..+..+++|+.|++++|.+.+..+ +..+++|+.
T Consensus 195 l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~-~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 269 (466)
T 1o6v_A 195 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKD-I--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTE 269 (466)
T ss_dssp GGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCC-C--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSE
T ss_pred hccCCCCCEEEecCCcccccccccccCCCCEEECCCCCccc-c--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCE
Confidence 88999999999999999887663 36799999999999985 3 468899999999999999998554 889999999
Q ss_pred EEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCChhhh
Q 004195 306 LDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNEEQ 366 (769)
Q Consensus 306 L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~~~ 366 (769)
|++++|++++..+ +..+++|+.|++++|++++..| +..+++++.+++++|.+++..+
T Consensus 270 L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~ 326 (466)
T 1o6v_A 270 LKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP 326 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG
T ss_pred EECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh
Confidence 9999999998655 8889999999999999998665 7788999999999999987653
No 308
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.94 E-value=1.3e-25 Score=250.02 Aligned_cols=221 Identities=29% Similarity=0.357 Sum_probs=112.0
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
++|++|+|++|++++ +| .|+++++|++|++++|++++ +|..+ .+|++|+|++|++++ +| .|+++++|++|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 355555555555544 44 35555555555555555553 34322 245555555555553 33 3555555555555
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCC-------------------Cccccc
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPR-------------------FPRLHK 252 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~-------------------~p~~~~ 252 (769)
++|++++ +|... ++|++|++++|+++ .+|.++.+++|+.|++++|.+++. +|....
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~l~~l~~~~~~L~~L~l~~N~l~~l~~~~~ 277 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQ 277 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCSSCCSCCTTCCEEECCSSCCSCCCCCCT
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCC-cccccCCCCCCCEEECCCCcCCcccccccccCEEECCCCcccccCcccC
Confidence 5555543 22211 24445555555444 334444444455555544444431 233334
Q ss_pred CCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCC-CCCCEEEccCCcCCccccccCCCCCCCcEEE
Q 004195 253 KMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSL-PSITYLDIHGNKLTGLLLQNMSCNPQLAFVD 331 (769)
Q Consensus 253 ~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~ 331 (769)
+|+.|++++|.+++ + |.. .++|++|++++|++++ +..+ ++|+.|++++|++++ +|.. +++|+.|+
T Consensus 278 ~L~~L~ls~N~l~~-l-~~~---~~~L~~L~l~~N~l~~-----i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~ 343 (454)
T 1jl5_A 278 SLTFLDVSENIFSG-L-SEL---PPNLYYLNASSNEIRS-----LCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLI 343 (454)
T ss_dssp TCCEEECCSSCCSE-E-SCC---CTTCCEEECCSSCCSE-----ECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEE
T ss_pred cCCEEECcCCccCc-c-cCc---CCcCCEEECcCCcCCc-----ccCCcCcCCEEECCCCcccc-cccc---CCcCCEEE
Confidence 44444444444443 1 100 1234444444444433 1122 467777777777776 4433 46777777
Q ss_pred ccCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 332 LSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 332 l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
+++|++++ +|. .+++++.+++++|.+++
T Consensus 344 L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 344 ASFNHLAE-VPE---LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSS
T ss_pred CCCCcccc-ccc---hhhhccEEECCCCCCCc
Confidence 77777774 554 35667777777777766
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=5.1e-26 Score=237.97 Aligned_cols=224 Identities=23% Similarity=0.238 Sum_probs=194.8
Q ss_pred cEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCC
Q 004195 115 KVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194 (769)
Q Consensus 115 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 194 (769)
+.++.++++++ .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 34566666664 345444 468999999999999877788999999999999999999888999999999999999999
Q ss_pred C-CcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchh
Q 004195 195 S-LSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDE 272 (769)
Q Consensus 195 ~-l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~ 272 (769)
. ++...|..|.++++|++|++++|.+++..|. +..+++|+.|++++|.++ .+.+..
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~----------------------~~~~~~ 148 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ----------------------ALPDDT 148 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC----------------------CCCTTT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccc----------------------ccCHhH
Confidence 7 8877788999999999999999999987665 777888888888777664 233556
Q ss_pred hcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCc
Q 004195 273 LRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTR 352 (769)
Q Consensus 273 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 352 (769)
+..+++|++|+|++|++++..+..+..+++|+.|++++|++++..|..+..+++|+.|++++|++++..+..+..+++++
T Consensus 149 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 228 (285)
T 1ozn_A 149 FRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQ 228 (285)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCC
T ss_pred hccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccC
Confidence 88899999999999999987777899999999999999999999999999999999999999999998888899999999
Q ss_pred eEECCCCCCCh
Q 004195 353 LVLYSKNCLSN 363 (769)
Q Consensus 353 ~l~l~~N~l~~ 363 (769)
.+++++|.+..
T Consensus 229 ~L~l~~N~~~c 239 (285)
T 1ozn_A 229 YLRLNDNPWVC 239 (285)
T ss_dssp EEECCSSCEEC
T ss_pred EEeccCCCccC
Confidence 99999998754
No 310
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.94 E-value=5.1e-27 Score=253.55 Aligned_cols=247 Identities=22% Similarity=0.193 Sum_probs=207.8
Q ss_pred CCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCc
Q 004195 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTG 174 (769)
Q Consensus 95 l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~ 174 (769)
+++|.+.+..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..+..|+++++|++|+|++|++++
T Consensus 59 l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 138 (353)
T 2z80_A 59 LSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT 138 (353)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS
T ss_pred CCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc
Confidence 33444444445578999999999999999999889999999999999999999997555569999999999999999995
Q ss_pred cCC-ccCcCCcCCCEEeccCC-CCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcc--
Q 004195 175 AVP-SELSLLQVLSVLSLKNN-SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPR-- 249 (769)
Q Consensus 175 ~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~-- 249 (769)
..+ ..|.++++|++|++++| .+++..|..|.++++|+.|++++|++++..|. +..+++|+.|++++|.+....+.
T Consensus 139 l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~ 218 (353)
T 2z80_A 139 LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFV 218 (353)
T ss_dssp SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHH
T ss_pred cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhh
Confidence 444 48999999999999999 57777788999999999999999999998664 89999999999999998643332
Q ss_pred -cccCCcEEEeCCccccCCcCchhh---cCCCcCcEEeccCccccc----cCCccCCCCCCCCEEEccCCcCCccccccC
Q 004195 250 -LHKKMVTLVLRNNRFQFGLNPDEL---RSYNQLQKLDISLNRFVG----PFIPSLLSLPSITYLDIHGNKLTGLLLQNM 321 (769)
Q Consensus 250 -~~~~L~~L~l~~N~~~~~i~p~~~---~~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 321 (769)
..++|+.|++++|.+++.. +..+ ...+.++.++|++|.+.+ .+|..+..+++|+.|+|++|+++...+..+
T Consensus 219 ~~~~~L~~L~L~~n~l~~~~-~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~ 297 (353)
T 2z80_A 219 DVTSSVECLELRDTDLDTFH-FSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIF 297 (353)
T ss_dssp HHTTTEEEEEEESCBCTTCC-CC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTT
T ss_pred hhcccccEEECCCCcccccc-ccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHH
Confidence 2578999999999998643 3333 346678899999998876 367778899999999999999996555557
Q ss_pred CCCCCCcEEEccCCcCCCCCC
Q 004195 322 SCNPQLAFVDLSSNLLTGYLP 342 (769)
Q Consensus 322 ~~l~~L~~l~l~~N~l~g~~p 342 (769)
..+++|+.|+|++|.+++..|
T Consensus 298 ~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 298 DRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp TTCTTCCEEECCSSCBCCCHH
T ss_pred hcCCCCCEEEeeCCCccCcCC
Confidence 899999999999999998766
No 311
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.94 E-value=4.2e-25 Score=246.06 Aligned_cols=224 Identities=28% Similarity=0.366 Sum_probs=175.2
Q ss_pred CCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEe
Q 004195 111 LSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190 (769)
Q Consensus 111 l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 190 (769)
+++|+.|++++|++++ +|.. .++|++|+|++|++++ +| +|+++++|++|++++|++++ +|..+ .+|++|+
T Consensus 110 ~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~ 179 (454)
T 1jl5_A 110 PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIA 179 (454)
T ss_dssp CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEE
T ss_pred cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEE
Confidence 4789999999999976 3321 1689999999999996 78 69999999999999999995 67654 5899999
Q ss_pred ccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCccc--ccCCcEEEeCCccccCCc
Q 004195 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRL--HKKMVTLVLRNNRFQFGL 268 (769)
Q Consensus 191 L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~--~~~L~~L~l~~N~~~~~i 268 (769)
|++|++++ +| .++++++|++|++++|++++ +|.+. ++|+.|++++|.+. .+|.. +++|++|++++|++++ +
T Consensus 180 L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~--~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~l~~-l 252 (454)
T 1jl5_A 180 AGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP--LSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLKT-L 252 (454)
T ss_dssp CCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC--TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCSS-C
T ss_pred CcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc--CcccEEECcCCcCC-cccccCCCCCCCEEECCCCcCCc-c
Confidence 99999997 56 69999999999999999997 44432 58999999999998 56654 5688999999999985 4
Q ss_pred CchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCc--cccccC-------------CCC-CCCcEEEc
Q 004195 269 NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTG--LLLQNM-------------SCN-PQLAFVDL 332 (769)
Q Consensus 269 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~~-------------~~l-~~L~~l~l 332 (769)
|.. +++|++|++++|++++ +|.. +++|+.|++++|++++ .+|..+ ..+ ++|+.|++
T Consensus 253 -~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~L 324 (454)
T 1jl5_A 253 -PDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNV 324 (454)
T ss_dssp -CSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEEC
T ss_pred -ccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEEC
Confidence 432 3678888888888876 4432 2566777777777666 222221 122 47899999
Q ss_pred cCCcCCCCCCccccccCCCceEECCCCCCCh
Q 004195 333 SSNLLTGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 333 ~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
++|++++ +|.. +++++.+++++|.++.
T Consensus 325 s~N~l~~-lp~~---~~~L~~L~L~~N~l~~ 351 (454)
T 1jl5_A 325 SNNKLIE-LPAL---PPRLERLIASFNHLAE 351 (454)
T ss_dssp CSSCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred CCCcccc-cccc---CCcCCEEECCCCcccc
Confidence 9999987 5654 4678999999999875
No 312
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=7.5e-26 Score=235.51 Aligned_cols=208 Identities=23% Similarity=0.186 Sum_probs=166.6
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 47899999999998877778999999999999999999777778999999999999999999888888999999999999
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCcccccc-CC-CCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcC
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGE-IP-DLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLN 269 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~-~p-~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~ 269 (769)
++|.+++..+..++++++|++|++++|++++. +| .+..+++|+.|++++|.+++. .
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~----------------------~ 165 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI----------------------Y 165 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE----------------------C
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcC----------------------C
Confidence 99999987777888999999999999998763 34 467777777777777766532 2
Q ss_pred chhhcCCCcCc----EEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCC
Q 004195 270 PDELRSYNQLQ----KLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLP 342 (769)
Q Consensus 270 p~~~~~l~~L~----~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p 342 (769)
+..+..+++|+ .|++++|.+++..+..+ ...+|+.|+|++|++++..+..+..+++|+.|++++|.+++..|
T Consensus 166 ~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 166 CTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp GGGGHHHHTCTTCCEEEECCSSCCCEECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred HHHhhhhhhccccceeeecCCCcccccCcccc-CCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 34444444454 78888888877544444 34478888888888888777777888888888888888886554
No 313
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=1.2e-25 Score=258.00 Aligned_cols=278 Identities=24% Similarity=0.249 Sum_probs=196.0
Q ss_pred CCCCCCCCCCCCCCCCCC---CCcceEecCCCeeEEEeCCCCCCCCCCCC---------CCCCCCCccccccCCCCCCcE
Q 004195 49 SSSFNTTTVTDFCNIEPT---PSLTLVCYEDNLTQLHIAGDNNNNINGGL---------AHNFSTDTFFSTLGSLSSLKV 116 (769)
Q Consensus 49 l~~w~~~~~~~~c~~~~~---~~~~v~C~~~~v~~l~l~~~~~~~~~~~l---------~~n~~~~~~~~~~~~l~~L~~ 116 (769)
.+.|.... ++|.|.+. -.....|...+++.|+++++.+..++..+ ++|.++ .+|. .+++|++
T Consensus 12 w~~W~~~~--~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~~lp~~l~~~L~~L~L~~N~l~-~lp~---~l~~L~~ 85 (622)
T 3g06_A 12 WSAWRRAA--PAEESRGRAAVVQKMRACLNNGNAVLNVGESGLTTLPDCLPAHITTLVIPDNNLT-SLPA---LPPELRT 85 (622)
T ss_dssp HHHHHHTC--CGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCSCCCSCCCTTCSEEEECSCCCS-CCCC---CCTTCCE
T ss_pred HHHHHhcC--CcchhccccccCcccccccCCCCcEEEecCCCcCccChhhCCCCcEEEecCCCCC-CCCC---cCCCCCE
Confidence 34575544 67777420 00113344456888888887766443222 223333 2232 4567777
Q ss_pred EEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCC
Q 004195 117 LSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196 (769)
Q Consensus 117 L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 196 (769)
|+|++|++++ +|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|++++ +|.. +++|++|+|++|.+
T Consensus 86 L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l 153 (622)
T 3g06_A 86 LEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQL 153 (622)
T ss_dssp EEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCC
T ss_pred EEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcC
Confidence 7777777653 454 56677777777777764 444 45667777777777764 4543 36777777777777
Q ss_pred cccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCC
Q 004195 197 SGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSY 276 (769)
Q Consensus 197 ~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l 276 (769)
++ +|. .+++|+.|++++|++++ +| ..+++|+.|++++|.+++ +|....+|..|++++|.++. + |. .+
T Consensus 154 ~~-l~~---~~~~L~~L~L~~N~l~~-l~--~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~-l-~~---~~ 220 (622)
T 3g06_A 154 AS-LPA---LPSELCKLWAYNNQLTS-LP--MLPSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTS-L-PA---LP 220 (622)
T ss_dssp SC-CCC---CCTTCCEEECCSSCCSC-CC--CCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSS-C-CC---CC
T ss_pred CC-cCC---ccCCCCEEECCCCCCCC-Cc--ccCCCCcEEECCCCCCCC-CCCccchhhEEECcCCcccc-c-CC---CC
Confidence 74 343 34567777777777775 33 456889999999999885 55667889999999999883 4 43 35
Q ss_pred CcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEEC
Q 004195 277 NQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLY 356 (769)
Q Consensus 277 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l 356 (769)
++|+.|+|++|++++ +| ..+++|+.|+|++|+|+. +|. .+++|+.|+|++|+|+ .+|..+..+++++.+++
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 789999999999987 45 456899999999999996 444 5689999999999999 77889999999999999
Q ss_pred CCCCCChhhh
Q 004195 357 SKNCLSNEEQ 366 (769)
Q Consensus 357 ~~N~l~~~~~ 366 (769)
++|.+++..+
T Consensus 292 ~~N~l~~~~~ 301 (622)
T 3g06_A 292 EGNPLSERTL 301 (622)
T ss_dssp CSCCCCHHHH
T ss_pred cCCCCCCcCH
Confidence 9999988654
No 314
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=1.1e-27 Score=254.65 Aligned_cols=236 Identities=23% Similarity=0.213 Sum_probs=160.7
Q ss_pred cccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcC
Q 004195 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQV 185 (769)
Q Consensus 106 ~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 185 (769)
..+..+++|+.|+|++|++++..|..|.++++|++|+|++|.+++..| |..+++|++|+|++|++++.. .+++
T Consensus 28 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~ 100 (317)
T 3o53_A 28 SLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPS 100 (317)
T ss_dssp HHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTT
T ss_pred HHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCC
Confidence 344566788888888888887777788888888888888888876554 888888888888888887432 2378
Q ss_pred CCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCC-CCCCCccCcEEeccCCcCCCCCccc----ccCCcEEEeC
Q 004195 186 LSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYFGPRFPRL----HKKMVTLVLR 260 (769)
Q Consensus 186 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p-~l~~l~~L~~l~l~~N~l~~~~p~~----~~~L~~L~l~ 260 (769)
|++|++++|.+++..+.. +++|+.|++++|++++..+ .+..+++|+.|++++|.+++..+.. +++|++|+|+
T Consensus 101 L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~ 177 (317)
T 3o53_A 101 IETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQ 177 (317)
T ss_dssp CCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECT
T ss_pred cCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECC
Confidence 888888888888655443 5678888888888887665 4677788888888888777654432 3566666666
Q ss_pred CccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCC-C
Q 004195 261 NNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT-G 339 (769)
Q Consensus 261 ~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~-g 339 (769)
+|.++.. + ....+++|++|+|++|++++ +|+.+..+++|+.|+|++|++++ +|..+..+++|+.|++++|.++ +
T Consensus 178 ~N~l~~~--~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 178 YNFIYDV--K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp TSCCCEE--E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHH
T ss_pred CCcCccc--c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCc
Confidence 6666532 2 22236666666666666665 33346666666666666666664 4555666666666666666666 5
Q ss_pred CCCccccccCCCceEEC
Q 004195 340 YLPSCLQVEAKTRLVLY 356 (769)
Q Consensus 340 ~~p~~~~~~~~l~~l~l 356 (769)
.+|..+..+++++.+++
T Consensus 253 ~~~~~~~~~~~L~~l~l 269 (317)
T 3o53_A 253 TLRDFFSKNQRVQTVAK 269 (317)
T ss_dssp HHHHHHHTCHHHHHHHH
T ss_pred CHHHHHhccccceEEEC
Confidence 55555555544444444
No 315
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=4.9e-27 Score=264.23 Aligned_cols=214 Identities=23% Similarity=0.207 Sum_probs=141.5
Q ss_pred CCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEE
Q 004195 110 SLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVL 189 (769)
Q Consensus 110 ~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 189 (769)
.+++|+.|+|++|.+++..|..|+++++|++|+|++|.+++.+| |+.+++|++|+|++|.|++..+ .++|++|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 34589999999999988878889999999999999999887665 8889999999999998875432 3788899
Q ss_pred eccCCCCcccCCccccCCCCCCEEEccCccccccCC-CCCCCccCcEEeccCCcCCCCCccc----ccCCcEEEeCCccc
Q 004195 190 SLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYFGPRFPRL----HKKMVTLVLRNNRF 264 (769)
Q Consensus 190 ~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p-~l~~l~~L~~l~l~~N~l~~~~p~~----~~~L~~L~l~~N~~ 264 (769)
+|++|.+++..+. .+++|+.|+|++|.+++.+| .++.+++|+.|++++|.+++..|.. +++|+.|+|++|.+
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 9999988876554 45788888888888888766 4677888888888887776544432 23455555555554
Q ss_pred cCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCC
Q 004195 265 QFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338 (769)
Q Consensus 265 ~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 338 (769)
++. | .+..+++|++|+|++|.+++. |+.+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+.
T Consensus 182 ~~~--~-~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 182 YDV--K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp CEE--E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred ccc--c-ccccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 432 1 122344555555555555442 2234444555555555555543 3334444455555555555444
No 316
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=8.8e-25 Score=226.60 Aligned_cols=217 Identities=21% Similarity=0.228 Sum_probs=133.0
Q ss_pred CCCCCCCCCCcceEecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcC
Q 004195 59 DFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSL 138 (769)
Q Consensus 59 ~~c~~~~~~~~~v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L 138 (769)
++|.|.| ....|. .+++.++++++.+..+ |..+. ++|+.|+|++|++++..+..|.++++|
T Consensus 3 ~~C~~~~---~~C~c~-~~~~~l~~~~~~l~~i-------------p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L 63 (270)
T 2o6q_A 3 ALCKKDG---GVCSCN-NNKNSVDCSSKKLTAI-------------PSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKL 63 (270)
T ss_dssp CCBGGGT---CSBEEE-TTTTEEECTTSCCSSC-------------CSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTC
T ss_pred ccCCCCC---CCCEeC-CCCCEEEccCCCCCcc-------------CCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCC
Confidence 7899975 123443 2456677666554422 11121 356667777777666555566667777
Q ss_pred ceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCc
Q 004195 139 EILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSAN 218 (769)
Q Consensus 139 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N 218 (769)
++|+|++|.++...+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 64 ~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 143 (270)
T 2o6q_A 64 RLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYN 143 (270)
T ss_dssp CEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCC
Confidence 77777777666544444566666666666666666555555666666666666666666655555666666666666666
Q ss_pred cccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCC
Q 004195 219 HLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLL 298 (769)
Q Consensus 219 ~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 298 (769)
++++.. +..+..+++|++|+|++|.+++..+..|.
T Consensus 144 ~l~~~~---------------------------------------------~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 178 (270)
T 2o6q_A 144 ELQSLP---------------------------------------------KGVFDKLTSLKELRLYNNQLKRVPEGAFD 178 (270)
T ss_dssp CCCCCC---------------------------------------------TTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred cCCccC---------------------------------------------HhHccCCcccceeEecCCcCcEeChhHhc
Confidence 555332 23344555666666666666655555566
Q ss_pred CCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCC
Q 004195 299 SLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTG 339 (769)
Q Consensus 299 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g 339 (769)
++++|+.|+|++|++++..+..+..+++|+.|+|++|.+..
T Consensus 179 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 179 KLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 66677777777777766655566666777777777776654
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=4.8e-26 Score=241.97 Aligned_cols=236 Identities=19% Similarity=0.179 Sum_probs=203.5
Q ss_pred CCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEecc
Q 004195 113 SLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLK 192 (769)
Q Consensus 113 ~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 192 (769)
+++.++++.+.+...++..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..| |..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45677888888866666667788899999999999998888999999999999999999987655 9999999999999
Q ss_pred CCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCccc---ccCCcEEEeCCccccCCcC
Q 004195 193 NNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRL---HKKMVTLVLRNNRFQFGLN 269 (769)
Q Consensus 193 ~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~---~~~L~~L~l~~N~~~~~i~ 269 (769)
+|.+++.. .+++|+.|++++|++++..+. .+++|+.|++++|.+++..+.. +++|+.|+|++|.+++..
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~--~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~- 160 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN- 160 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEEC--CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE-
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCcc--ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc-
Confidence 99998543 348999999999999987654 3688999999999999876643 578999999999999654
Q ss_pred chhh-cCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCcccccc
Q 004195 270 PDEL-RSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVE 348 (769)
Q Consensus 270 p~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~ 348 (769)
+..+ ..+++|++|+|++|.+++. +....+++|+.|+|++|++++..+ .+..+++|+.|+|++|+++ .+|..+..+
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~-~l~~~~~~l 236 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV--KGQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLV-LIEKALRFS 236 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE--ECCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCC-EECTTCCCC
T ss_pred HHHHhhccCcCCEEECCCCcCccc--ccccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCccc-chhhHhhcC
Confidence 5655 5789999999999999875 344468999999999999998655 4889999999999999999 467788889
Q ss_pred CCCceEECCCCCCC
Q 004195 349 AKTRLVLYSKNCLS 362 (769)
Q Consensus 349 ~~l~~l~l~~N~l~ 362 (769)
++++.+++++|.+.
T Consensus 237 ~~L~~L~l~~N~~~ 250 (317)
T 3o53_A 237 QNLEHFDLRGNGFH 250 (317)
T ss_dssp TTCCEEECTTCCCB
T ss_pred CCCCEEEccCCCcc
Confidence 99999999999987
No 318
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=1.1e-25 Score=253.25 Aligned_cols=215 Identities=19% Similarity=0.187 Sum_probs=189.9
Q ss_pred CCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEE
Q 004195 134 HSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVV 213 (769)
Q Consensus 134 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 213 (769)
.+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.+| |+.+++|++|+|++|.+++..+ .++|+.|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 34489999999999999888999999999999999999997766 9999999999999999986443 3899999
Q ss_pred EccCccccccCCCCCCCccCcEEeccCCcCCCCCccc---ccCCcEEEeCCccccCCcCchhhc-CCCcCcEEeccCccc
Q 004195 214 SLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRL---HKKMVTLVLRNNRFQFGLNPDELR-SYNQLQKLDISLNRF 289 (769)
Q Consensus 214 ~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~---~~~L~~L~l~~N~~~~~i~p~~~~-~l~~L~~L~Ls~N~l 289 (769)
++++|.+++.++. .+++|+.|++++|.+++..|.. +++|+.|+|++|.+++.+ |..+. .+++|+.|+|++|.|
T Consensus 105 ~L~~N~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN-FAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEEC--CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEE-GGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCcc--ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcC-hHHHhhhCCcccEEecCCCcc
Confidence 9999999987764 4689999999999999887754 578999999999999765 77775 799999999999999
Q ss_pred cccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCC
Q 004195 290 VGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 290 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 362 (769)
++. +.+..+++|+.|+|++|.+++.+|. +..+++|+.|+|++|.+++ +|..+..+++++.+++++|.+.
T Consensus 182 ~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 182 YDV--KGQVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp CEE--ECCCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred ccc--cccccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 986 3455699999999999999986554 8899999999999999996 6777888899999999999887
No 319
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=2e-24 Score=224.77 Aligned_cols=222 Identities=21% Similarity=0.219 Sum_probs=187.4
Q ss_pred EeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCc
Q 004195 118 SLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLS 197 (769)
Q Consensus 118 ~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 197 (769)
+.++.++ ..+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.++
T Consensus 13 ~c~~~~l-~~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 89 (276)
T 2z62_A 13 QCMELNF-YKIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89 (276)
T ss_dssp ECTTSCC-SSCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred EecCCCc-cccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccC
Confidence 3334444 24565554 57999999999999877779999999999999999999888889999999999999999999
Q ss_pred ccCCccccCCCCCCEEEccCccccccCC-CCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCC
Q 004195 198 GFLPVSLTGLQSLRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSY 276 (769)
Q Consensus 198 ~~~p~~l~~l~~L~~L~ls~N~l~~~~p-~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l 276 (769)
+..|..|.++++|++|++++|++++..+ .+..+++|+.|++++|.+++. .+ |..+..+
T Consensus 90 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--------------------~l-~~~~~~l 148 (276)
T 2z62_A 90 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF--------------------KL-PEYFSNL 148 (276)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC--------------------CC-CGGGGGC
T ss_pred ccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCcccee--------------------cC-chhhccC
Confidence 9888999999999999999999988766 477888888888877766421 23 7888999
Q ss_pred CcCcEEeccCccccccCCccCCCCCCCC----EEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCc
Q 004195 277 NQLQKLDISLNRFVGPFIPSLLSLPSIT----YLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTR 352 (769)
Q Consensus 277 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 352 (769)
++|++|+|++|++++..+..+..+++|+ .|++++|.+++..+..+.. .+|+.|++++|++++..+..+..+++++
T Consensus 149 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 227 (276)
T 2z62_A 149 TNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQ 227 (276)
T ss_dssp TTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCC
T ss_pred CCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhccccccc
Confidence 9999999999999998777787777776 8999999999877666654 5899999999999988888888899999
Q ss_pred eEECCCCCCChh
Q 004195 353 LVLYSKNCLSNE 364 (769)
Q Consensus 353 ~l~l~~N~l~~~ 364 (769)
.+++++|.+.+.
T Consensus 228 ~L~l~~N~~~c~ 239 (276)
T 2z62_A 228 KIWLHTNPWDCS 239 (276)
T ss_dssp EEECCSSCBCCC
T ss_pred EEEccCCccccc
Confidence 999999988653
No 320
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=8.8e-25 Score=226.80 Aligned_cols=210 Identities=22% Similarity=0.241 Sum_probs=165.9
Q ss_pred ccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCC
Q 004195 107 TLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVL 186 (769)
Q Consensus 107 ~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 186 (769)
.+..+++|+.|++++|.+.. + ..+..+++|++|+|++|.+++ + ..+..+++|++|+|++|.+++..|..|.++++|
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 111 (272)
T 3rfs_A 36 TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNL 111 (272)
T ss_dssp CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCC
Confidence 34567788888888888753 3 347888888888888888875 3 378888888888888888887777778888888
Q ss_pred CEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCcccc
Q 004195 187 SVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQ 265 (769)
Q Consensus 187 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~ 265 (769)
++|+|++|++++..+..|+++++|++|++++|++++.++. +..+++|+.|++++|.+++
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-------------------- 171 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-------------------- 171 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC--------------------
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc--------------------
Confidence 8888888888877777788888888888888888876665 5677777777776666542
Q ss_pred CCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccc
Q 004195 266 FGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCL 345 (769)
Q Consensus 266 ~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~ 345 (769)
+.+..+..+++|++|+|++|++++..+..+..+++|+.|++++|.+.+. +++|+.++++.|.++|.+|..+
T Consensus 172 --~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 172 --LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp --CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTT
T ss_pred --cCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcc
Confidence 3255677888999999999999987777788999999999999988753 5678899999999999999887
Q ss_pred cccC
Q 004195 346 QVEA 349 (769)
Q Consensus 346 ~~~~ 349 (769)
+.+.
T Consensus 243 ~~~~ 246 (272)
T 3rfs_A 243 GSVA 246 (272)
T ss_dssp SCBC
T ss_pred cccC
Confidence 6543
No 321
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=2.4e-23 Score=217.81 Aligned_cols=202 Identities=25% Similarity=0.262 Sum_probs=121.5
Q ss_pred cCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCC
Q 004195 108 LGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187 (769)
Q Consensus 108 ~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 187 (769)
+.++++|+.+++++|+++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+ . +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-CCCCcCC
Confidence 456677777777777775 3454443 567777777777776666777777777777777777764332 2 6677777
Q ss_pred EEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccC
Q 004195 188 VLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQF 266 (769)
Q Consensus 188 ~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~ 266 (769)
+|+|++|+++ .+|..+.++++|++|+|++|++++.++. +..+++|+.|++++|.+++
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~--------------------- 138 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT--------------------- 138 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCC---------------------
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCc---------------------
Confidence 7777777776 4566666777777777777776655443 4555555555555444431
Q ss_pred CcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCC
Q 004195 267 GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338 (769)
Q Consensus 267 ~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 338 (769)
+++..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+++. +|..+..+++|+.++|++|.+.
T Consensus 139 -~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~-ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 139 -LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp -CCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCCCSEEECCSCCBC
T ss_pred -cChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCc-cChhhcccccCCeEEeCCCCcc
Confidence 223344455555566666655554444444555555555555555553 3444444455555555555544
No 322
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=5.1e-23 Score=213.31 Aligned_cols=203 Identities=22% Similarity=0.226 Sum_probs=137.5
Q ss_pred CCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEecc
Q 004195 113 SLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLK 192 (769)
Q Consensus 113 ~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 192 (769)
+++.+++++++++. +|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++...+..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 34555555555542 343332 345555555555554444455555555555555555553333344455555555555
Q ss_pred CCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchh
Q 004195 193 NNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDE 272 (769)
Q Consensus 193 ~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~ 272 (769)
+|.+++..+..|.++++|++|++++|++++ +.+..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~---------------------------------------------~~~~~ 128 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKS---------------------------------------------LPPRV 128 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCC---------------------------------------------CCTTT
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCe---------------------------------------------eCHHH
Confidence 555554444444444444444444444332 22556
Q ss_pred hcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCc
Q 004195 273 LRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTR 352 (769)
Q Consensus 273 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~ 352 (769)
|..+++|++|+|++|.+++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+++++
T Consensus 129 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 208 (270)
T 2o6q_A 129 FDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLK 208 (270)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred hCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCC
Confidence 77888999999999999987777799999999999999999998888899999999999999999988888888899999
Q ss_pred eEECCCCCCCh
Q 004195 353 LVLYSKNCLSN 363 (769)
Q Consensus 353 ~l~l~~N~l~~ 363 (769)
.+++++|.+..
T Consensus 209 ~L~l~~N~~~c 219 (270)
T 2o6q_A 209 MLQLQENPWDC 219 (270)
T ss_dssp EEECCSSCBCC
T ss_pred EEEecCCCeeC
Confidence 99999997653
No 323
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=1.2e-23 Score=222.82 Aligned_cols=226 Identities=18% Similarity=0.176 Sum_probs=161.7
Q ss_pred CCCcEEEeecccccCC-CCc--cccCCCcCceeeccCcccCCcCCccc--cCCCcCCEEEcccCcCCccCC----ccCcC
Q 004195 112 SSLKVLSLVSLGLWGP-LPG--SIAHSSSLEILNLSSNYLSGSIPVQI--SSLRNLQTLILDDNKFTGAVP----SELSL 182 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~-~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~ 182 (769)
..++.|.+.++.++.. +.. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|++++..| ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 4578888888777532 111 12345679999999999999999998 899999999999999998666 45678
Q ss_pred CcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccc---cCCC--CCCCccCcEEeccCCcCCCCCcccccCCcEE
Q 004195 183 LQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSG---EIPD--LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTL 257 (769)
Q Consensus 183 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~---~~p~--l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L 257 (769)
+++|++|+|++|.+++..|..|+++++|++|+|++|++.+ ..+. +..+++|++|++++|.++.. +.
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~-------- 214 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETP-TG-------- 214 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCH-HH--------
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCch-HH--------
Confidence 9999999999999998888999999999999999999876 2222 36788888888888877521 11
Q ss_pred EeCCccccCCcCch-hhcCCCcCcEEeccCccccccCCccCCCC---CCCCEEEccCCcCCccccccCCCCCCCcEEEcc
Q 004195 258 VLRNNRFQFGLNPD-ELRSYNQLQKLDISLNRFVGPFIPSLLSL---PSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLS 333 (769)
Q Consensus 258 ~l~~N~~~~~i~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 333 (769)
. +. .+..+++|++|+|++|++.+..|+.+..+ ++|++|+|++|+++. +|..+. ++|+.|+|+
T Consensus 215 ----------~-~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~-lp~~~~--~~L~~L~Ls 280 (310)
T 4glp_A 215 ----------V-CAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQ-VPKGLP--AKLRVLDLS 280 (310)
T ss_dssp ----------H-HHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCS-CCSCCC--SCCSCEECC
T ss_pred ----------H-HHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCc-hhhhhc--CCCCEEECC
Confidence 0 11 23556666677777777666656555554 467777777777663 454443 567777777
Q ss_pred CCcCCCCCCccccccCCCceEECCCCCCC
Q 004195 334 SNLLTGYLPSCLQVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 334 ~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 362 (769)
+|++++. |. +..+++++.+++++|.++
T Consensus 281 ~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 281 SNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp SCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred CCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 7777653 22 344566667777777664
No 324
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=3.8e-23 Score=216.34 Aligned_cols=204 Identities=22% Similarity=0.179 Sum_probs=172.6
Q ss_pred cccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCC
Q 004195 131 SIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSL 210 (769)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 210 (769)
.++++++|+.+++++|.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..+. +.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 4778889999999999998 5776664 6889999999999888888899999999999999999865433 788899
Q ss_pred CEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCcccc
Q 004195 211 RVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFV 290 (769)
Q Consensus 211 ~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~ 290 (769)
++|+|++|+++.....+..+++|+.|++++|.++ .+.|..|..+++|++|+|++|+++
T Consensus 80 ~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~----------------------~l~~~~~~~l~~L~~L~L~~N~l~ 137 (290)
T 1p9a_G 80 GTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT----------------------SLPLGALRGLGELQELYLKGNELK 137 (290)
T ss_dssp CEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCC----------------------CCCSSTTTTCTTCCEEECTTSCCC
T ss_pred CEEECCCCcCCcCchhhccCCCCCEEECCCCcCc----------------------ccCHHHHcCCCCCCEEECCCCCCC
Confidence 9999999998855545677777777777776664 233677889999999999999999
Q ss_pred ccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCCCCC
Q 004195 291 GPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 291 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 362 (769)
+..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|+++ .+|..+.....++.+++++|.+.
T Consensus 138 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 138 TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 887778899999999999999999988888899999999999999999 67777777788999999999764
No 325
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=1.8e-23 Score=217.00 Aligned_cols=206 Identities=20% Similarity=0.234 Sum_probs=173.3
Q ss_pred CCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCcc
Q 004195 76 DNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQ 155 (769)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 155 (769)
.+++.|++.++.... .+.+..+++|++|+|++|.+++. +.++++++|++|+|++|.+++..|..
T Consensus 41 ~~L~~L~l~~~~i~~--------------~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~ 104 (272)
T 3rfs_A 41 NSIDQIIANNSDIKS--------------VQGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGV 104 (272)
T ss_dssp TTCCEEECTTSCCCC--------------CTTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTT
T ss_pred cceeeeeeCCCCccc--------------ccccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhH
Confidence 367888877665432 13578899999999999999873 47999999999999999999888888
Q ss_pred ccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCc
Q 004195 156 ISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLR 234 (769)
Q Consensus 156 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~ 234 (769)
|+++++|++|+|++|++++..|..|+.+++|++|+|++|.+++..+..|+++++|+.|++++|++++.++. +..+++|+
T Consensus 105 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 184 (272)
T 3rfs_A 105 FDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLK 184 (272)
T ss_dssp TTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCC
Confidence 99999999999999999988888899999999999999999988888899999999999999999987776 67888888
Q ss_pred EEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCC
Q 004195 235 VFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLT 314 (769)
Q Consensus 235 ~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 314 (769)
.|++++|.+++. .+..+..+++|++|+|++|.+.+ .+++|+.|+++.|+++
T Consensus 185 ~L~L~~N~l~~~----------------------~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~ 235 (272)
T 3rfs_A 185 DLRLYQNQLKSV----------------------PDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHS 235 (272)
T ss_dssp EEECCSSCCSCC----------------------CTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTG
T ss_pred EEECCCCcCCcc----------------------CHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCC
Confidence 888888877632 25556778888888888887765 3557888888888888
Q ss_pred ccccccCCCCCC
Q 004195 315 GLLLQNMSCNPQ 326 (769)
Q Consensus 315 ~~~~~~~~~l~~ 326 (769)
|.+|..++.++.
T Consensus 236 g~ip~~~~~~~~ 247 (272)
T 3rfs_A 236 GVVRNSAGSVAP 247 (272)
T ss_dssp GGBBCTTSCBCG
T ss_pred CcccCcccccCC
Confidence 888887776543
No 326
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=7.5e-25 Score=248.54 Aligned_cols=181 Identities=13% Similarity=0.142 Sum_probs=137.6
Q ss_pred CCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCC--------hhHHHHHHHHHhhccCCceeeEeeeeeccCCCCCC
Q 004195 483 DSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSS--------PHMYTYHIELISKLRHSNLVSALGHCLDFSLDDPS 554 (769)
Q Consensus 483 ~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~--------~~~~~~Ei~~l~~l~H~nIv~l~~~~~~~~~~~~~ 554 (769)
...+.||+|+||.||+|+. .++.+|+|+........ .+.+.+|++++++++||||+++..++.+.+.
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~---- 413 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDN---- 413 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTT----
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCc----
Confidence 3467999999999999955 47889999875432221 2347899999999999999955555544222
Q ss_pred cceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 555 ISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 555 ~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.++||||+++++|.+++.. +..++.|+++||+|||+. +|+||||||+|||++. ++||+|||++
T Consensus 414 ---~~lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla 476 (540)
T 3en9_A 414 ---KRIMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLG 476 (540)
T ss_dssp ---TEEEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTC
T ss_pred ---cEEEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccC
Confidence 5999999999999999975 568999999999999999 9999999999999998 9999999999
Q ss_pred hhhhccCC---------cceeecCCCcchhhhcc--CCCCCCCCeeehhHHHHHHHhCCCCC
Q 004195 635 LLAEARGK---------GSAEVSSPAKKTSVLAR--TEQDDKSDVYDIGIILIEIIVGRPIT 685 (769)
Q Consensus 635 ~~~~~~~~---------~~~~~~~~~~~pe~~~~--~~~~~ksDVwS~Gvil~elltG~~p~ 685 (769)
+....... ....++..|++||.+.. ..|+.++|+||..+-.++-+.++.++
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 477 KISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp EECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred EECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 76543211 12345567778998865 56888999999999888888777665
No 327
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=5.8e-23 Score=208.77 Aligned_cols=195 Identities=16% Similarity=0.180 Sum_probs=120.0
Q ss_pred CCcEEEeecccccCCCCccccCCCcCceeeccCcc-cCCcCCccccCCCcCCEEEccc-CcCCccCCccCcCCcCCCEEe
Q 004195 113 SLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNY-LSGSIPVQISSLRNLQTLILDD-NKFTGAVPSELSLLQVLSVLS 190 (769)
Q Consensus 113 ~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ 190 (769)
+|+.|+|++|++++..+..|.++++|++|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 67777777777776666677777777777777775 6655555677777777777776 777766666677777777777
Q ss_pred ccCCCCcccCCccccCCCCCC---EEEccCc-cccccCCC-CCCCccCc-EEeccCCcCCCCCcccccCCcEEEeCCccc
Q 004195 191 LKNNSLSGFLPVSLTGLQSLR---VVSLSAN-HLSGEIPD-LRNLKNLR-VFDVQDNYFGPRFPRLHKKMVTLVLRNNRF 264 (769)
Q Consensus 191 L~~N~l~~~~p~~l~~l~~L~---~L~ls~N-~l~~~~p~-l~~l~~L~-~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~ 264 (769)
|++|.+++ +|. |.++++|+ +|++++| ++++..+. +..+++|+ .|++++|.++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-------------------- 169 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-------------------- 169 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC--------------------
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc--------------------
Confidence 77777765 454 66666666 7777776 66654443 45555555 5555555443
Q ss_pred cCCcCchhhcCCCcCcEEeccCcc-ccccCCccCCCC-CCCCEEEccCCcCCccccccCCCCCCCcEEEccCC
Q 004195 265 QFGLNPDELRSYNQLQKLDISLNR-FVGPFIPSLLSL-PSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSN 335 (769)
Q Consensus 265 ~~~i~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 335 (769)
.+++..+.. ++|+.|+|++|. +++..+..|..+ ++|+.|++++|++++..+. .+++|+.|+++++
T Consensus 170 --~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 170 --SVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp --EECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred --ccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 221222222 456666666663 655444555566 6666666666666543332 3445555555543
No 328
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.4e-23 Score=222.30 Aligned_cols=202 Identities=18% Similarity=0.180 Sum_probs=160.8
Q ss_pred CCCCCcEEEeecccccCCCCccc--cCCCcCceeeccCcccCCcCC----ccccCCCcCCEEEcccCcCCccCCccCcCC
Q 004195 110 SLSSLKVLSLVSLGLWGPLPGSI--AHSSSLEILNLSSNYLSGSIP----VQISSLRNLQTLILDDNKFTGAVPSELSLL 183 (769)
Q Consensus 110 ~l~~L~~L~L~~n~l~g~~p~~~--~~l~~L~~L~Ls~N~l~g~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 183 (769)
.+++|+.|+|++|.+++..|..+ .++++|++|+|++|++++..| ..+..+++|++|+|++|++++..|..|+.+
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 35679999999999999999988 999999999999999998766 456789999999999999998889999999
Q ss_pred cCCCEEeccCCCCccc--C--CccccCCCCCCEEEccCccccccCCC----CCCCccCcEEeccCCcCCCCCcccccCCc
Q 004195 184 QVLSVLSLKNNSLSGF--L--PVSLTGLQSLRVVSLSANHLSGEIPD----LRNLKNLRVFDVQDNYFGPRFPRLHKKMV 255 (769)
Q Consensus 184 ~~L~~L~L~~N~l~~~--~--p~~l~~l~~L~~L~ls~N~l~~~~p~----l~~l~~L~~l~l~~N~l~~~~p~~~~~L~ 255 (769)
++|++|+|++|++.+. + +..++++++|++|+|++|+++...+. +..+++|+.|++++|.+++..|
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p------- 241 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVN------- 241 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCC-------
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccch-------
Confidence 9999999999998753 2 23457899999999999999743221 3567888888888887765543
Q ss_pred EEEeCCccccCCcCchhhcCC---CcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEc
Q 004195 256 TLVLRNNRFQFGLNPDELRSY---NQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDL 332 (769)
Q Consensus 256 ~L~l~~N~~~~~i~p~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 332 (769)
..+..+ ++|++|+|++|+++ .+|..+. ++|+.|+|++|++++. |. +..+++|+.|+|
T Consensus 242 ---------------~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L 301 (310)
T 4glp_A 242 ---------------PSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTL 301 (310)
T ss_dssp ---------------SCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEEC
T ss_pred ---------------hhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEEC
Confidence 233333 57778888888877 4566554 6788888888888774 22 566788888888
Q ss_pred cCCcCC
Q 004195 333 SSNLLT 338 (769)
Q Consensus 333 ~~N~l~ 338 (769)
++|+++
T Consensus 302 ~~N~l~ 307 (310)
T 4glp_A 302 DGNPFL 307 (310)
T ss_dssp SSTTTS
T ss_pred cCCCCC
Confidence 888876
No 329
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=7.9e-23 Score=207.77 Aligned_cols=203 Identities=16% Similarity=0.218 Sum_probs=170.2
Q ss_pred CCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCc-CCccCCccCcCCcCCCEEeccC-CCCcccCCccc
Q 004195 127 PLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNK-FTGAVPSELSLLQVLSVLSLKN-NSLSGFLPVSL 204 (769)
Q Consensus 127 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l 204 (769)
.+|. +. .+|++|+|++|++++..+..|.++++|++|+|++|+ +++..+..|.++++|++|+|++ |.+++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 3455 33 389999999999998777789999999999999997 8877777899999999999998 99998888899
Q ss_pred cCCCCCCEEEccCccccccCCCCCCCccCc---EEeccCC-cCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCc
Q 004195 205 TGLQSLRVVSLSANHLSGEIPDLRNLKNLR---VFDVQDN-YFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQ 280 (769)
Q Consensus 205 ~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~---~l~l~~N-~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~ 280 (769)
.++++|++|++++|++++ +|.+..+++|+ .|++++| .++ .+++..|..+++|+
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l~----------------------~i~~~~~~~l~~L~ 158 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYMT----------------------SIPVNAFQGLCNET 158 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTCC----------------------EECTTTTTTTBSSE
T ss_pred CCCCCCCEEeCCCCCCcc-ccccccccccccccEEECCCCcchh----------------------hcCcccccchhcce
Confidence 999999999999999997 66688888887 7777777 554 34356688899999
Q ss_pred -EEeccCccccccCCccCCCCCCCCEEEccCCc-CCccccccCCCC-CCCcEEEccCCcCCCCCCccccccCCCceEECC
Q 004195 281 -KLDISLNRFVGPFIPSLLSLPSITYLDIHGNK-LTGLLLQNMSCN-PQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYS 357 (769)
Q Consensus 281 -~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l-~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~ 357 (769)
+|++++|+++. +|+.....++|+.|+|++|+ +++..+..|..+ ++|+.|++++|++++..+. .+.+++.+.++
T Consensus 159 ~~L~l~~n~l~~-i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~ 234 (239)
T 2xwt_C 159 LTLKLYNNGFTS-VQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIAR 234 (239)
T ss_dssp EEEECCSCCCCE-ECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECT
T ss_pred eEEEcCCCCCcc-cCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeecc
Confidence 99999999984 55544444899999999995 998888889999 9999999999999965544 45677888887
Q ss_pred CC
Q 004195 358 KN 359 (769)
Q Consensus 358 ~N 359 (769)
++
T Consensus 235 ~~ 236 (239)
T 2xwt_C 235 NT 236 (239)
T ss_dssp TC
T ss_pred Cc
Confidence 65
No 330
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.89 E-value=2e-22 Score=231.47 Aligned_cols=240 Identities=26% Similarity=0.266 Sum_probs=195.5
Q ss_pred CCeeEEEeCCCCCCCCCC--------CCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcc
Q 004195 76 DNLTQLHIAGDNNNNING--------GLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNY 147 (769)
Q Consensus 76 ~~v~~l~l~~~~~~~~~~--------~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~ 147 (769)
.+++.|++++|.+..++. ++++|.++. +|. .+++|++|+|++|++++ +|. .+++|++|+|++|+
T Consensus 61 ~~L~~L~L~~N~l~~lp~~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~ 132 (622)
T 3g06_A 61 AHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQ 132 (622)
T ss_dssp TTCSEEEECSCCCSCCCCCCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSC
T ss_pred CCCcEEEecCCCCCCCCCcCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCC
Confidence 367777777776554332 234455443 343 68999999999999976 454 67899999999999
Q ss_pred cCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCC
Q 004195 148 LSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDL 227 (769)
Q Consensus 148 l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l 227 (769)
|++ +|.. +++|++|+|++|++++ +|. .+++|+.|+|++|.+++ +| ..+++|+.|++++|++++..+
T Consensus 133 l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l~~-- 198 (622)
T 3g06_A 133 LTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASLPT-- 198 (622)
T ss_dssp CSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC--
T ss_pred CCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCCCC--
Confidence 995 6754 4899999999999985 554 35789999999999996 56 567899999999999997433
Q ss_pred CCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEE
Q 004195 228 RNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLD 307 (769)
Q Consensus 228 ~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 307 (769)
.+++|+.|++++|.++ .+|....+|+.|+|++|.+++ + | ..+++|+.|+|++|+|+. +|. .+++|+.|+
T Consensus 199 -~~~~L~~L~L~~N~l~-~l~~~~~~L~~L~Ls~N~L~~-l-p---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~ 267 (622)
T 3g06_A 199 -LPSELYKLWAYNNRLT-SLPALPSGLKELIVSGNRLTS-L-P---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLS 267 (622)
T ss_dssp -CCTTCCEEECCSSCCS-SCCCCCTTCCEEECCSSCCSC-C-C---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEE
T ss_pred -ccchhhEEECcCCccc-ccCCCCCCCCEEEccCCccCc-C-C---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEe
Confidence 2478999999999998 466667899999999999985 5 5 566899999999999986 555 678999999
Q ss_pred ccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccC
Q 004195 308 IHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEA 349 (769)
Q Consensus 308 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~ 349 (769)
|++|+|+ .+|..+..+++|+.|+|++|.+++.+|..+..+.
T Consensus 268 Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 268 VYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 9999999 5688899999999999999999999988776543
No 331
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=6.7e-25 Score=239.94 Aligned_cols=238 Identities=24% Similarity=0.246 Sum_probs=146.4
Q ss_pred cccCCCCCCcEEEeecccccCC----CCccccCCCcCceeeccCc---ccCCcCCccc-------cCCCcCCEEEcccCc
Q 004195 106 STLGSLSSLKVLSLVSLGLWGP----LPGSIAHSSSLEILNLSSN---YLSGSIPVQI-------SSLRNLQTLILDDNK 171 (769)
Q Consensus 106 ~~~~~l~~L~~L~L~~n~l~g~----~p~~~~~l~~L~~L~Ls~N---~l~g~~p~~~-------~~l~~L~~L~L~~N~ 171 (769)
..+..+++|+.|+|++|.+++. ++..|.++++|++|+|++| ++++.+|..+ ..+++|++|+|++|.
T Consensus 26 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 105 (386)
T 2ca6_A 26 AVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA 105 (386)
T ss_dssp HHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred HHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCc
Confidence 3455566666666666666544 2233556666666666664 3444455444 456666666666666
Q ss_pred CCc----cCCccCcCCcCCCEEeccCCCCcccCCcccc----CC---------CCCCEEEccCcccc-ccCC----CCCC
Q 004195 172 FTG----AVPSELSLLQVLSVLSLKNNSLSGFLPVSLT----GL---------QSLRVVSLSANHLS-GEIP----DLRN 229 (769)
Q Consensus 172 l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~----~l---------~~L~~L~ls~N~l~-~~~p----~l~~ 229 (769)
+++ .+|..+..+++|++|+|++|.++...+..+. .+ ++|++|+|++|+++ +.++ .+..
T Consensus 106 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~ 185 (386)
T 2ca6_A 106 FGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 185 (386)
T ss_dssp CCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHh
Confidence 665 3555566666666666666666533332222 22 55555555555554 2222 1333
Q ss_pred CccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCC----cCchhhcCCCcCcEEeccCcccc----ccCCccCCCCC
Q 004195 230 LKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFG----LNPDELRSYNQLQKLDISLNRFV----GPFIPSLLSLP 301 (769)
Q Consensus 230 l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~----i~p~~~~~l~~L~~L~Ls~N~l~----~~~~~~~~~l~ 301 (769)
+++| +.|+|++|+++.. +.|..+..+++|+.|+|++|.++ +.+|..+..++
T Consensus 186 ~~~L---------------------~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~ 244 (386)
T 2ca6_A 186 HRLL---------------------HTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP 244 (386)
T ss_dssp CTTC---------------------CEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCT
T ss_pred CCCc---------------------CEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCC
Confidence 4444 4555555544310 11336677788888888888875 55677777888
Q ss_pred CCCEEEccCCcCCcc----ccccC--CCCCCCcEEEccCCcCCC----CCCccc-cccCCCceEECCCCCCChh
Q 004195 302 SITYLDIHGNKLTGL----LLQNM--SCNPQLAFVDLSSNLLTG----YLPSCL-QVEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 302 ~L~~L~l~~N~l~~~----~~~~~--~~l~~L~~l~l~~N~l~g----~~p~~~-~~~~~l~~l~l~~N~l~~~ 364 (769)
+|+.|+|++|.+++. ++..+ +.+++|+.|+|++|.+++ .+|..+ ..+++++.+++++|.+++.
T Consensus 245 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 245 NLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp TCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred CcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 888888888888775 45555 347888888888888887 467666 4567888888888887654
No 332
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.6e-22 Score=213.62 Aligned_cols=195 Identities=22% Similarity=0.349 Sum_probs=143.7
Q ss_pred cCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCC
Q 004195 108 LGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLS 187 (769)
Q Consensus 108 ~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 187 (769)
+..+++|+.|++++|.++. +| .+..+++|++|+|++|.+++. |. +..+++|++|+|++|++++ +| .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCC
Confidence 4457788888888888754 44 577888888888888888754 43 8888888888888888875 33 577888888
Q ss_pred EEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCC
Q 004195 188 VLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFG 267 (769)
Q Consensus 188 ~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~ 267 (769)
+|+|++|.+++. | .+.++++|+.|++++|++++..+ +..+++|+.|++++|.+++
T Consensus 111 ~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~---------------------- 165 (308)
T 1h6u_A 111 TLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSD---------------------- 165 (308)
T ss_dssp EEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC----------------------
T ss_pred EEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCC----------------------
Confidence 888888888763 3 37788888888888888876443 6666666666666665542
Q ss_pred cCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCC
Q 004195 268 LNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTG 339 (769)
Q Consensus 268 i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g 339 (769)
+ +. +..+++|+.|++++|.+++..+ +..+++|+.|+|++|++++..+ +..+++|+.|++++|.+++
T Consensus 166 ~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 166 L-TP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp C-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred C-hh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 2 22 6777788888888888876433 7778888888888888887653 7778888888888888875
No 333
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=8.2e-22 Score=201.82 Aligned_cols=181 Identities=20% Similarity=0.197 Sum_probs=117.0
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
...+.++++++.++ .+|..+. ++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 34567777777774 4555444 46777777777777666666777777777777777777666666777777777777
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCch
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPD 271 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~ 271 (769)
++|.+++..+..|.++++|++|+|++|++++..+ .
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~---------------------------------------------~ 125 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPS---------------------------------------------G 125 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT---------------------------------------------T
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcCh---------------------------------------------h
Confidence 7777776666666666677776666666654333 2
Q ss_pred hhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCC
Q 004195 272 ELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGY 340 (769)
Q Consensus 272 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~ 340 (769)
.+..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+++.
T Consensus 126 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 126 VFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred HhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 344455555666666665554444566666666666666666665555666666666666666666654
No 334
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=4.9e-24 Score=230.88 Aligned_cols=246 Identities=20% Similarity=0.140 Sum_probs=126.0
Q ss_pred EEeecccccCCCCccccCCCcCceeeccCcccCCcCC----ccccCCC-cCCEEEcccCcCCccCCccCcCC-----cCC
Q 004195 117 LSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIP----VQISSLR-NLQTLILDDNKFTGAVPSELSLL-----QVL 186 (769)
Q Consensus 117 L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L 186 (769)
++|++|+++|.+|..+...++|++|||++|.+++..+ ..|.+++ +|++|+|++|++++..+..|..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 3445555555555444444445555555555554333 4444454 55555555555554444444443 555
Q ss_pred CEEeccCCCCcccCCcccc----CC-CCCCEEEccCccccccCCC-----CCC-CccCcEEeccCCcCCCCCccc-----
Q 004195 187 SVLSLKNNSLSGFLPVSLT----GL-QSLRVVSLSANHLSGEIPD-----LRN-LKNLRVFDVQDNYFGPRFPRL----- 250 (769)
Q Consensus 187 ~~L~L~~N~l~~~~p~~l~----~l-~~L~~L~ls~N~l~~~~p~-----l~~-l~~L~~l~l~~N~l~~~~p~~----- 250 (769)
++|+|++|.+++..+..+. .+ ++|++|+|++|++++..+. +.. .++|+.|++++|.++...+..
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 5555555555544443222 22 4555555555555443321 222 135555555555554322211
Q ss_pred --c-cCCcEEEeCCccccCCcCchh----hcCC-CcCcEEeccCcccccc----CCccCCC-CCCCCEEEccCCcCCccc
Q 004195 251 --H-KKMVTLVLRNNRFQFGLNPDE----LRSY-NQLQKLDISLNRFVGP----FIPSLLS-LPSITYLDIHGNKLTGLL 317 (769)
Q Consensus 251 --~-~~L~~L~l~~N~~~~~i~p~~----~~~l-~~L~~L~Ls~N~l~~~----~~~~~~~-l~~L~~L~l~~N~l~~~~ 317 (769)
. .+|++|+|++|.++... +.. +..+ ++|++|+|++|.+... ++..+.. .++|+.|+|++|.+++..
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~-~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKN-CAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSC-HHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred hcCCccccEeeecCCCCchhh-HHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 1 25566666666665332 332 2333 4677777777776652 2333333 246777777777776643
Q ss_pred c----ccCCCCCCCcEEEccCCcCCCCCCc-------cccccCCCceEECCCCCCCh
Q 004195 318 L----QNMSCNPQLAFVDLSSNLLTGYLPS-------CLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 318 ~----~~~~~l~~L~~l~l~~N~l~g~~p~-------~~~~~~~l~~l~l~~N~l~~ 363 (769)
+ ..+..+++|+.|+|++|.+.+..+. .+..+++++.+++++|.+..
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 3 3345566777777777775443332 34455566777777777654
No 335
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=7.8e-22 Score=202.01 Aligned_cols=163 Identities=22% Similarity=0.244 Sum_probs=132.0
Q ss_pred CCCCCCCCCCcceEecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCCCccccCCCcC
Q 004195 59 DFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSL 138 (769)
Q Consensus 59 ~~c~~~~~~~~~v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L 138 (769)
+||.|. |+.|.. ..+.+++.++.+..+ |..+. ++|+.|+|++|++++..|..|.++++|
T Consensus 3 ~Cp~~~-----gC~C~~-~~~~l~~~~~~l~~~-------------p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L 61 (251)
T 3m19_A 3 TCETVT-----GCTCNE-GKKEVDCQGKSLDSV-------------PSGIP--ADTEKLDLQSTGLATLSDATFRGLTKL 61 (251)
T ss_dssp -CHHHH-----SSEEEG-GGTEEECTTCCCSSC-------------CSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred cCCCCC-----ceEcCC-CCeEEecCCCCcccc-------------CCCCC--CCCCEEEccCCCcCccCHhHhcCcccC
Confidence 566776 488953 456788887766543 22232 589999999999999989999999999
Q ss_pred ceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCc
Q 004195 139 EILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSAN 218 (769)
Q Consensus 139 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N 218 (769)
++|+|++|+|++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+++..+..|.++++|++|+|++|
T Consensus 62 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 141 (251)
T 3m19_A 62 TWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTN 141 (251)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCC
Confidence 99999999999988888999999999999999999888888999999999999999999887888899999999999999
Q ss_pred cccccCCC-CCCCccCcEEeccCCc
Q 004195 219 HLSGEIPD-LRNLKNLRVFDVQDNY 242 (769)
Q Consensus 219 ~l~~~~p~-l~~l~~L~~l~l~~N~ 242 (769)
+|++.++. +..+++|+.|++++|.
T Consensus 142 ~l~~~~~~~~~~l~~L~~L~L~~N~ 166 (251)
T 3m19_A 142 QLQSIPAGAFDKLTNLQTLSLSTNQ 166 (251)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred cCCccCHHHcCcCcCCCEEECCCCc
Confidence 98865442 4444444444443333
No 336
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=2.5e-24 Score=235.43 Aligned_cols=224 Identities=18% Similarity=0.214 Sum_probs=169.0
Q ss_pred CCCccccCCCcCceeeccCcccCCcCC----ccccCCCcCCEEEcccC---cCCccCCccC-------cCCcCCCEEecc
Q 004195 127 PLPGSIAHSSSLEILNLSSNYLSGSIP----VQISSLRNLQTLILDDN---KFTGAVPSEL-------SLLQVLSVLSLK 192 (769)
Q Consensus 127 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p----~~~~~l~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~L~ 192 (769)
.++..+..+++|++|+|++|.+++..+ ..|..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 467788889999999999999987644 44778999999999985 4556667655 688899999999
Q ss_pred CCCCcc----cCCccccCCCCCCEEEccCccccccCCC-----CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCcc
Q 004195 193 NNSLSG----FLPVSLTGLQSLRVVSLSANHLSGEIPD-----LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNR 263 (769)
Q Consensus 193 ~N~l~~----~~p~~l~~l~~L~~L~ls~N~l~~~~p~-----l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~ 263 (769)
+|.+++ .+|..+.++++|++|+|++|.+++..+. +..+ ..|.+.+. .++|++|+|++|+
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l--------~~~~~~~~----~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQEL--------AVNKKAKN----APPLRSIICGRNR 170 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHH--------HHHHHHHT----CCCCCEEECCSSC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHH--------hhhhhccc----CCCCcEEECCCCC
Confidence 999887 4677888888999999998888643221 2222 00000000 0344455555555
Q ss_pred cc-CCcCc---hhhcCCCcCcEEeccCcccc--c---cCCccCCCCCCCCEEEccCCcCC----ccccccCCCCCCCcEE
Q 004195 264 FQ-FGLNP---DELRSYNQLQKLDISLNRFV--G---PFIPSLLSLPSITYLDIHGNKLT----GLLLQNMSCNPQLAFV 330 (769)
Q Consensus 264 ~~-~~i~p---~~~~~l~~L~~L~Ls~N~l~--~---~~~~~~~~l~~L~~L~l~~N~l~----~~~~~~~~~l~~L~~l 330 (769)
++ +.+ + ..+..+++|++|+|++|++. | ..+..+..+++|+.|+|++|.++ +.+|..+..+++|+.|
T Consensus 171 l~~~~~-~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L 249 (386)
T 2ca6_A 171 LENGSM-KEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLREL 249 (386)
T ss_dssp CTGGGH-HHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEE
T ss_pred CCcHHH-HHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEE
Confidence 54 222 3 46778999999999999997 3 34448889999999999999997 6678889999999999
Q ss_pred EccCCcCCCC----CCccccc--cCCCceEECCCCCCCh
Q 004195 331 DLSSNLLTGY----LPSCLQV--EAKTRLVLYSKNCLSN 363 (769)
Q Consensus 331 ~l~~N~l~g~----~p~~~~~--~~~l~~l~l~~N~l~~ 363 (769)
+|++|.+++. +|..+.. +++++.+++++|.+++
T Consensus 250 ~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 250 GLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp ECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred ECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 9999999876 5666633 7889999999999987
No 337
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=1.3e-23 Score=227.45 Aligned_cols=249 Identities=18% Similarity=0.175 Sum_probs=199.8
Q ss_pred CCCCCCCCccccccCCCCCCcEEEeecccccCCCC----ccccCCC-cCceeeccCcccCCcCCccccCC-----CcCCE
Q 004195 95 LAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPLP----GSIAHSS-SLEILNLSSNYLSGSIPVQISSL-----RNLQT 164 (769)
Q Consensus 95 l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~p----~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l-----~~L~~ 164 (769)
++.|.+++.+|..+...++|+.|+|++|.+++..+ ..|.+++ +|++|+|++|.+++..+..|..+ ++|++
T Consensus 5 ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~ 84 (362)
T 3goz_A 5 LTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTS 84 (362)
T ss_dssp CCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCE
T ss_pred cccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccE
Confidence 45556667777777777889999999999988766 7788998 99999999999998888888876 99999
Q ss_pred EEcccCcCCccCCccCcC----C-cCCCEEeccCCCCcccCCcccc----C-CCCCCEEEccCccccccCCC-----CCC
Q 004195 165 LILDDNKFTGAVPSELSL----L-QVLSVLSLKNNSLSGFLPVSLT----G-LQSLRVVSLSANHLSGEIPD-----LRN 229 (769)
Q Consensus 165 L~L~~N~l~~~~p~~~~~----l-~~L~~L~L~~N~l~~~~p~~l~----~-l~~L~~L~ls~N~l~~~~p~-----l~~ 229 (769)
|+|++|++++..+..+.. + ++|++|+|++|.+++..+..+. . .++|++|+|++|++++.... +..
T Consensus 85 L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~ 164 (362)
T 3goz_A 85 LNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAA 164 (362)
T ss_dssp EECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHT
T ss_pred EECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhc
Confidence 999999999877775444 4 8999999999999987765543 4 36999999999999853321 344
Q ss_pred Cc-cCcEEeccCCcCCCCCccc-------c-cCCcEEEeCCccccCC----cCchhhcC-CCcCcEEeccCccccccCC-
Q 004195 230 LK-NLRVFDVQDNYFGPRFPRL-------H-KKMVTLVLRNNRFQFG----LNPDELRS-YNQLQKLDISLNRFVGPFI- 294 (769)
Q Consensus 230 l~-~L~~l~l~~N~l~~~~p~~-------~-~~L~~L~l~~N~~~~~----i~p~~~~~-l~~L~~L~Ls~N~l~~~~~- 294 (769)
++ +|+.|++++|.+++..+.. . .+|+.|+|++|.++.. + +..+.. .++|++|+|++|.+++..+
T Consensus 165 ~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l-~~~l~~~~~~L~~L~Ls~N~l~~~~~~ 243 (362)
T 3goz_A 165 IPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAEL-AYIFSSIPNHVVSLNLCLNCLHGPSLE 243 (362)
T ss_dssp SCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHH-HHHHHHSCTTCCEEECCSSCCCCCCHH
T ss_pred CCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHH-HHHHhcCCCCceEEECcCCCCCcHHHH
Confidence 54 9999999999998766531 2 5899999999999852 3 445555 4599999999999987544
Q ss_pred ---ccCCCCCCCCEEEccCCcCCccc-------cccCCCCCCCcEEEccCCcCCCCCCcc
Q 004195 295 ---PSLLSLPSITYLDIHGNKLTGLL-------LQNMSCNPQLAFVDLSSNLLTGYLPSC 344 (769)
Q Consensus 295 ---~~~~~l~~L~~L~l~~N~l~~~~-------~~~~~~l~~L~~l~l~~N~l~g~~p~~ 344 (769)
..+..+++|+.|+|++|.+.+.. +..+..+++|+.||+++|.+....|..
T Consensus 244 ~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~ 303 (362)
T 3goz_A 244 NLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIP 303 (362)
T ss_dssp HHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHH
T ss_pred HHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHH
Confidence 34578899999999999965543 346778899999999999998764443
No 338
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=5.4e-24 Score=228.07 Aligned_cols=228 Identities=17% Similarity=0.187 Sum_probs=154.1
Q ss_pred eEecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCC--CCCcEEEeecccccCCCCccccCCCcCceeeccCccc
Q 004195 71 LVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSL--SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYL 148 (769)
Q Consensus 71 v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l--~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l 148 (769)
+.|....++.+++.++... +..+..+ ++++.|++++|.+.+..+. +.++++|++|+|++|.+
T Consensus 42 ~~~~~~~~~~l~l~~~~~~---------------~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l 105 (336)
T 2ast_B 42 LASDESLWQTLDLTGKNLH---------------PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVI 105 (336)
T ss_dssp HHTCSTTSSEEECTTCBCC---------------HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEE
T ss_pred HhcCchhheeeccccccCC---------------HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCc
Confidence 4454445677777654322 3345556 7889999999998877665 56789999999999998
Q ss_pred CCc-CCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCC-CCccc-CCccccCCCCCCEEEccCc-ccccc-
Q 004195 149 SGS-IPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN-SLSGF-LPVSLTGLQSLRVVSLSAN-HLSGE- 223 (769)
Q Consensus 149 ~g~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~~L~~L~ls~N-~l~~~- 223 (769)
++. +|..+..+++|++|+|++|.+++..|..++.+++|++|+|++| .+++. ++..+.++++|++|++++| .+++.
T Consensus 106 ~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~ 185 (336)
T 2ast_B 106 EVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKH 185 (336)
T ss_dssp CHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHH
T ss_pred CHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHH
Confidence 866 8888889999999999999988888888888999999999998 67753 6667888889999999988 88753
Q ss_pred CCC-CCCCc-cCcEEeccCCc--CCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCcc-ccccCCccCC
Q 004195 224 IPD-LRNLK-NLRVFDVQDNY--FGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNR-FVGPFIPSLL 298 (769)
Q Consensus 224 ~p~-l~~l~-~L~~l~l~~N~--l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~ 298 (769)
++. +..++ +|+.|++++|. ++. +.+ |..+..+++|++|++++|. +++..+..+.
T Consensus 186 ~~~~~~~l~~~L~~L~l~~~~~~~~~--------------------~~l-~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~ 244 (336)
T 2ast_B 186 VQVAVAHVSETITQLNLSGYRKNLQK--------------------SDL-STLVRRCPNLVHLDLSDSVMLKNDCFQEFF 244 (336)
T ss_dssp HHHHHHHSCTTCCEEECCSCGGGSCH--------------------HHH-HHHHHHCTTCSEEECTTCTTCCGGGGGGGG
T ss_pred HHHHHHhcccCCCEEEeCCCcccCCH--------------------HHH-HHHHhhCCCCCEEeCCCCCcCCHHHHHHHh
Confidence 333 56667 77777777773 331 112 3344455555555555555 4444444555
Q ss_pred CCCCCCEEEccCCc-CCccccccCCCCCCCcEEEccCC
Q 004195 299 SLPSITYLDIHGNK-LTGLLLQNMSCNPQLAFVDLSSN 335 (769)
Q Consensus 299 ~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~l~l~~N 335 (769)
.+++|+.|++++|. ++......+..+++|+.|++++|
T Consensus 245 ~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 245 QLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp GCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 55555555555553 22211223445555555555555
No 339
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.87 E-value=1.3e-24 Score=243.53 Aligned_cols=260 Identities=22% Similarity=0.194 Sum_probs=167.5
Q ss_pred cccccCCCCCCcEEEeecccccCCCCcccc-----CCCcCceeeccCcccCCc----CCccccCCCcCCEEEcccCcCCc
Q 004195 104 FFSTLGSLSSLKVLSLVSLGLWGPLPGSIA-----HSSSLEILNLSSNYLSGS----IPVQISSLRNLQTLILDDNKFTG 174 (769)
Q Consensus 104 ~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~-----~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~~ 174 (769)
++..+..+++|+.|+|++|.+++..+..+. .+++|++|+|++|++++. ++..+..+++|++|+|++|.++.
T Consensus 105 l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~ 184 (461)
T 1z7x_W 105 LSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINE 184 (461)
T ss_dssp HHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcch
Confidence 355667777777777777777543333222 245677777777777753 35556667777777777777765
Q ss_pred cCCccCc-----CCcCCCEEeccCCCCccc----CCccccCCCCCCEEEccCccccccC-----CC-CCCCccCcEEecc
Q 004195 175 AVPSELS-----LLQVLSVLSLKNNSLSGF----LPVSLTGLQSLRVVSLSANHLSGEI-----PD-LRNLKNLRVFDVQ 239 (769)
Q Consensus 175 ~~p~~~~-----~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~ls~N~l~~~~-----p~-l~~l~~L~~l~l~ 239 (769)
..+..+. .+++|++|+|++|.++.. ++..+..+++|+.|++++|.+++.. +. ...+++|+.|+++
T Consensus 185 ~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~ 264 (461)
T 1z7x_W 185 AGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIW 264 (461)
T ss_dssp HHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECc
Confidence 4443333 255777777777777653 4566667777777777777775431 11 2346777777777
Q ss_pred CCcCCCC----Cccc---ccCCcEEEeCCccccCCcCchhhcC-----CCcCcEEeccCcccccc----CCccCCCCCCC
Q 004195 240 DNYFGPR----FPRL---HKKMVTLVLRNNRFQFGLNPDELRS-----YNQLQKLDISLNRFVGP----FIPSLLSLPSI 303 (769)
Q Consensus 240 ~N~l~~~----~p~~---~~~L~~L~l~~N~~~~~i~p~~~~~-----l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L 303 (769)
+|.++.. ++.. .++|++|++++|.++... +..+.. .++|++|+|++|.+++. ++..+..+++|
T Consensus 265 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~-~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L 343 (461)
T 1z7x_W 265 ECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEG-ARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFL 343 (461)
T ss_dssp TSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHH-HHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSC
T ss_pred CCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHH-HHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCc
Confidence 7777653 3332 457777788777765321 222322 25777888887777654 34455666778
Q ss_pred CEEEccCCcCCccccccCCC-----CCCCcEEEccCCcCCC----CCCccccccCCCceEECCCCCCChh
Q 004195 304 TYLDIHGNKLTGLLLQNMSC-----NPQLAFVDLSSNLLTG----YLPSCLQVEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 304 ~~L~l~~N~l~~~~~~~~~~-----l~~L~~l~l~~N~l~g----~~p~~~~~~~~l~~l~l~~N~l~~~ 364 (769)
+.|+|++|.+++..+..+.. .++|+.|++++|.+++ .+|..+..+++++.+++++|.+++.
T Consensus 344 ~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 344 LELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp CEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred cEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 88888888777654443332 5678888888887775 6677777777778888888777653
No 340
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=2.3e-22 Score=209.06 Aligned_cols=142 Identities=11% Similarity=0.073 Sum_probs=113.5
Q ss_pred HHHHHHHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCC------------------ChhHHHHHHHHHhhc
Q 004195 472 LDELKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKS------------------SPHMYTYHIELISKL 533 (769)
Q Consensus 472 ~~el~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~------------------~~~~~~~Ei~~l~~l 533 (769)
+..+......|+..+.||+|+||.||+|+..+|+.||||.++..... ....+.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 34455555567778999999999999999977999999999743211 134588999999999
Q ss_pred cCCceeeEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCc
Q 004195 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNL 613 (769)
Q Consensus 534 ~H~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl 613 (769)
+ | +++.+++.. + ..++||||+++|+|.+ +... ....++.|+++||+|||+. +|+||||
T Consensus 162 ~--~-~~v~~~~~~-~-------~~~lvmE~~~g~~L~~-l~~~-------~~~~i~~qi~~~l~~lH~~---giiHrDl 219 (282)
T 1zar_A 162 Q--G-LAVPKVYAW-E-------GNAVLMELIDAKELYR-VRVE-------NPDEVLDMILEEVAKFYHR---GIVHGDL 219 (282)
T ss_dssp T--T-SSSCCEEEE-E-------TTEEEEECCCCEEGGG-CCCS-------CHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred c--C-CCcCeEEec-c-------ceEEEEEecCCCcHHH-cchh-------hHHHHHHHHHHHHHHHHHC---CCEeCCC
Confidence 9 4 666665533 1 1599999999999998 5321 2346999999999999998 9999999
Q ss_pred cccceeeCCCceeeecCCCCchh
Q 004195 614 KITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 614 Kp~NILld~~~~~kl~DFGla~~ 636 (769)
||+|||++ ++.+||+|||+++.
T Consensus 220 kp~NILl~-~~~vkl~DFG~a~~ 241 (282)
T 1zar_A 220 SQYNVLVS-EEGIWIIDFPQSVE 241 (282)
T ss_dssp STTSEEEE-TTEEEECCCTTCEE
T ss_pred CHHHEEEE-CCcEEEEECCCCeE
Confidence 99999999 99999999999863
No 341
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=3.7e-23 Score=221.53 Aligned_cols=219 Identities=16% Similarity=0.123 Sum_probs=178.1
Q ss_pred CCcEEEeecccccCCCCccccCC--CcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCcc-CCccCcCCcCCCEE
Q 004195 113 SLKVLSLVSLGLWGPLPGSIAHS--SSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGA-VPSELSLLQVLSVL 189 (769)
Q Consensus 113 ~L~~L~L~~n~l~g~~p~~~~~l--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L 189 (769)
.++.|++++|.+. |..+..+ +++++|++++|.+++..|. +..+++|++|+|++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4788999998876 5667777 8899999999999876665 66789999999999998866 88888999999999
Q ss_pred eccCCCCcccCCccccCCCCCCEEEccCc-ccccc-CCC-CCCCccCcEEeccCC-cCCCCCcccccCCcEEEeCCcccc
Q 004195 190 SLKNNSLSGFLPVSLTGLQSLRVVSLSAN-HLSGE-IPD-LRNLKNLRVFDVQDN-YFGPRFPRLHKKMVTLVLRNNRFQ 265 (769)
Q Consensus 190 ~L~~N~l~~~~p~~l~~l~~L~~L~ls~N-~l~~~-~p~-l~~l~~L~~l~l~~N-~l~~~~p~~~~~L~~L~l~~N~~~ 265 (769)
+|++|.+++..|..++++++|++|++++| .+++. ++. +..+++|+.|++++| .++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~--------------------- 182 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFT--------------------- 182 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCC---------------------
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcC---------------------
Confidence 99999998888888889999999999998 67652 333 556666766666666 543
Q ss_pred CC-cCchhhcCCC-cCcEEeccCc--ccc-ccCCccCCCCCCCCEEEccCCc-CCccccccCCCCCCCcEEEccCCcCCC
Q 004195 266 FG-LNPDELRSYN-QLQKLDISLN--RFV-GPFIPSLLSLPSITYLDIHGNK-LTGLLLQNMSCNPQLAFVDLSSNLLTG 339 (769)
Q Consensus 266 ~~-i~p~~~~~l~-~L~~L~Ls~N--~l~-~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~l~l~~N~l~g 339 (769)
.. + +..+..++ +|++|++++| .++ +.++..+.++++|+.|++++|. +++..+..+..+++|+.|++++|. +
T Consensus 183 ~~~~-~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~ 259 (336)
T 2ast_B 183 EKHV-QVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--D 259 (336)
T ss_dssp HHHH-HHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--T
T ss_pred hHHH-HHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--C
Confidence 21 2 66788899 9999999999 555 4566777889999999999999 888888899999999999999996 3
Q ss_pred CCCc---cccccCCCceEECCCC
Q 004195 340 YLPS---CLQVEAKTRLVLYSKN 359 (769)
Q Consensus 340 ~~p~---~~~~~~~l~~l~l~~N 359 (769)
..|. .+..+++++.+++++|
T Consensus 260 ~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 260 IIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCHHHHHHHhcCCCCCEEeccCc
Confidence 3344 5677899999999988
No 342
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=1.1e-21 Score=207.18 Aligned_cols=207 Identities=23% Similarity=0.308 Sum_probs=167.8
Q ss_pred EeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCc
Q 004195 118 SLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLS 197 (769)
Q Consensus 118 ~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 197 (769)
.+..+.+...+ .+.++++|++|++++|.++. +| .+..+++|++|+|++|++++. |. +..+++|++|+|++|.++
T Consensus 25 ~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~ 98 (308)
T 1h6u_A 25 AAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLK 98 (308)
T ss_dssp HTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCS
T ss_pred HhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCC
Confidence 44445554432 35678889999999999884 55 688899999999999999854 44 889999999999999988
Q ss_pred ccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCC
Q 004195 198 GFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYN 277 (769)
Q Consensus 198 ~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~ 277 (769)
+. ..+.++++|+.|++++|++++. +.+..+++|+.|++++|.+++ + +. +..++
T Consensus 99 ~~--~~~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~----------------------~-~~-l~~l~ 151 (308)
T 1h6u_A 99 NV--SAIAGLQSIKTLDLTSTQITDV-TPLAGLSNLQVLYLDLNQITN----------------------I-SP-LAGLT 151 (308)
T ss_dssp CC--GGGTTCTTCCEEECTTSCCCCC-GGGTTCTTCCEEECCSSCCCC----------------------C-GG-GGGCT
T ss_pred Cc--hhhcCCCCCCEEECCCCCCCCc-hhhcCCCCCCEEECCCCccCc----------------------C-cc-ccCCC
Confidence 63 3688899999999999998864 447777777777777776542 2 22 78899
Q ss_pred cCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECC
Q 004195 278 QLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYS 357 (769)
Q Consensus 278 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~ 357 (769)
+|++|+|++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..| +..+++++.++++
T Consensus 152 ~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~ 225 (308)
T 1h6u_A 152 NLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225 (308)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEE
T ss_pred CccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEcc
Confidence 99999999999987433 8999999999999999998655 7889999999999999997664 7788999999999
Q ss_pred CCCCCh
Q 004195 358 KNCLSN 363 (769)
Q Consensus 358 ~N~l~~ 363 (769)
+|.+++
T Consensus 226 ~N~i~~ 231 (308)
T 1h6u_A 226 NQTITN 231 (308)
T ss_dssp EEEEEC
T ss_pred CCeeec
Confidence 998865
No 343
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=1.2e-21 Score=194.42 Aligned_cols=178 Identities=21% Similarity=0.179 Sum_probs=142.8
Q ss_pred CCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEe
Q 004195 111 LSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190 (769)
Q Consensus 111 l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 190 (769)
.++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 106 (208)
T 2o6s_A 27 PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELA 106 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEE
Confidence 35899999999999887777889999999999999999977677789999999999999999977777789999999999
Q ss_pred ccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcC
Q 004195 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLN 269 (769)
Q Consensus 191 L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~ 269 (769)
|++|.+++..+..|.++++|+.|++++|++++.++. +..+++|+.|++++|.+.+.
T Consensus 107 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~----------------------- 163 (208)
T 2o6s_A 107 LNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT----------------------- 163 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC-----------------------
T ss_pred cCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC-----------------------
Confidence 999999987777889999999999999999977665 67788888888877765432
Q ss_pred chhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccC
Q 004195 270 PDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNM 321 (769)
Q Consensus 270 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 321 (769)
+++|++|+++.|+++|.+|..++.++. ++..+...+..+..+
T Consensus 164 ------~~~l~~L~~~~n~~~g~ip~~~~~l~~----~~~~C~~~~~~~~~~ 205 (208)
T 2o6s_A 164 ------CPGIRYLSEWINKHSGVVRNSAGSVAP----DSAKCSGSGKPVRSI 205 (208)
T ss_dssp ------TTTTHHHHHHHHHCTTTBBCTTSSBCT----TCSBBTTTCCBGGGC
T ss_pred ------CCCHHHHHHHHHhCCceeeccCccccC----CccccccCCCcceee
Confidence 345677777777777777777776654 334444444444433
No 344
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=1.9e-21 Score=220.53 Aligned_cols=188 Identities=25% Similarity=0.364 Sum_probs=127.8
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
.+|+.|+|++|++++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. |.+ +|++|+|
T Consensus 59 ~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~L 127 (571)
T 3cvr_A 59 NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDV 127 (571)
T ss_dssp TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEEC
T ss_pred CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEEC
Confidence 378888888888876 676553 77888888888888 567 456888888888888886 666 655 8888888
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCch
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPD 271 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~ 271 (769)
++|.|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|++++|.+++ + |.
T Consensus 128 s~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls~N~L~~----------------------l-p~ 177 (571)
T 3cvr_A 128 DNNQLTM-LPE---LPALLEYINADNNQLTM-LPE--LPTSLEVLSVRNNQLTF----------------------L-PE 177 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSC----------------------C-CC
T ss_pred CCCcCCC-CCC---cCccccEEeCCCCccCc-CCC--cCCCcCEEECCCCCCCC----------------------c-ch
Confidence 8888886 555 57788888888888876 444 45666666666666654 2 32
Q ss_pred hhcCCCcCcEEeccCccccccCCccCCCCCCC-------CEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCcc
Q 004195 272 ELRSYNQLQKLDISLNRFVGPFIPSLLSLPSI-------TYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSC 344 (769)
Q Consensus 272 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-------~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~ 344 (769)
+. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+. +|..+..+++|+.|+|++|.+++.+|..
T Consensus 178 -l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~~ 249 (571)
T 3cvr_A 178 -LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRES 249 (571)
T ss_dssp -CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHHHH
T ss_pred -hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCHHH
Confidence 32 55666666666665 3444 433 45 777777777764 4555555777777777777777766666
Q ss_pred cccc
Q 004195 345 LQVE 348 (769)
Q Consensus 345 ~~~~ 348 (769)
+..+
T Consensus 250 l~~l 253 (571)
T 3cvr_A 250 LSQQ 253 (571)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5543
No 345
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=3.4e-21 Score=218.46 Aligned_cols=219 Identities=24% Similarity=0.330 Sum_probs=162.2
Q ss_pred CCCCCCCCCCCCCCCCCCCcce-EecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccccccCCCCCCcEEEeecccccCCC
Q 004195 50 SSFNTTTVTDFCNIEPTPSLTL-VCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFFSTLGSLSSLKVLSLVSLGLWGPL 128 (769)
Q Consensus 50 ~~w~~~~~~~~c~~~~~~~~~v-~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~g~~ 128 (769)
.+|.... ++|......|.++ .|..++++.|+++++.+.. +|..+ +++|+.|+|++|+++ .+
T Consensus 34 ~~W~~~~--~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-------------lp~~l--~~~L~~L~Ls~N~l~-~i 95 (571)
T 3cvr_A 34 DKWEKQA--LPGENRNEAVSLLKECLINQFSELQLNRLNLSS-------------LPDNL--PPQITVLEITQNALI-SL 95 (571)
T ss_dssp HHHHTTC--CTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-------------CCSCC--CTTCSEEECCSSCCS-CC
T ss_pred HHHhccC--CccccccchhhhccccccCCccEEEeCCCCCCc-------------cCHhH--cCCCCEEECcCCCCc-cc
Confidence 4575544 6773211112357 6877789999998876653 22333 378999999999997 67
Q ss_pred CccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCC
Q 004195 129 PGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQ 208 (769)
Q Consensus 129 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 208 (769)
| ..+++|++|+|++|+|++ +|. |.+ +|++|+|++|+|++ +|. .+++|++|+|++|.|++ +|. .++
T Consensus 96 p---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~ 160 (571)
T 3cvr_A 96 P---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPT 160 (571)
T ss_dssp C---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCT
T ss_pred c---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCC
Confidence 7 568999999999999997 887 776 99999999999997 676 68999999999999997 665 678
Q ss_pred CCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCcc
Q 004195 209 SLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNR 288 (769)
Q Consensus 209 ~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~ 288 (769)
+|+.|+|++|+|++ +|.+. ++|+.|++++|.|+ .+|....+| ....+.|+.|+|++|+
T Consensus 161 ~L~~L~Ls~N~L~~-lp~l~--~~L~~L~Ls~N~L~-~lp~~~~~L------------------~~~~~~L~~L~Ls~N~ 218 (571)
T 3cvr_A 161 SLEVLSVRNNQLTF-LPELP--ESLEALDVSTNLLE-SLPAVPVRN------------------HHSEETEIFFRCRENR 218 (571)
T ss_dssp TCCEEECCSSCCSC-CCCCC--TTCCEEECCSSCCS-SCCCCC--------------------------CCEEEECCSSC
T ss_pred CcCEEECCCCCCCC-cchhh--CCCCEEECcCCCCC-chhhHHHhh------------------hcccccceEEecCCCc
Confidence 99999999999998 55555 88888888888876 333211111 0112234788888888
Q ss_pred ccccCCccCCCCCCCCEEEccCCcCCccccccCCCC
Q 004195 289 FVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCN 324 (769)
Q Consensus 289 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 324 (769)
|+. +|..+..+++|+.|+|++|.+++.+|..+..+
T Consensus 219 l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 219 ITH-IPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp CCC-CCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred cee-cCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 874 67777778888888888888888777766554
No 346
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.85 E-value=5.8e-24 Score=238.25 Aligned_cols=255 Identities=21% Similarity=0.158 Sum_probs=153.0
Q ss_pred cCCCCCCcEEEeecccccC----CCCccccCCCcCceeeccCcccCCcCCccc-cCCC----cCCEEEcccCcCCc----
Q 004195 108 LGSLSSLKVLSLVSLGLWG----PLPGSIAHSSSLEILNLSSNYLSGSIPVQI-SSLR----NLQTLILDDNKFTG---- 174 (769)
Q Consensus 108 ~~~l~~L~~L~L~~n~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~----~L~~L~L~~N~l~~---- 174 (769)
+..+++|++|+|++|+++. .++..+..+++|++|+|++|.++...+..+ ..++ +|++|+|++|+++.
T Consensus 24 ~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~ 103 (461)
T 1z7x_W 24 LPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCG 103 (461)
T ss_dssp HHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHH
T ss_pred HhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHH
Confidence 5556677777777777653 345566667777777777777765433333 2344 57777777777763
Q ss_pred cCCccCcCCcCCCEEeccCCCCcccCCcccc-----CCCCCCEEEccCccccccC----C-CCCCCccCcEEeccCCcCC
Q 004195 175 AVPSELSLLQVLSVLSLKNNSLSGFLPVSLT-----GLQSLRVVSLSANHLSGEI----P-DLRNLKNLRVFDVQDNYFG 244 (769)
Q Consensus 175 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-----~l~~L~~L~ls~N~l~~~~----p-~l~~l~~L~~l~l~~N~l~ 244 (769)
.+|..+..+++|++|+|++|.++...+..+. ..++|++|++++|++++.. + .+..+++|+.|++++|.++
T Consensus 104 ~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 183 (461)
T 1z7x_W 104 VLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDIN 183 (461)
T ss_dssp HHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcc
Confidence 4566677777777777777776644333222 2456777777777766532 1 1445567777777777665
Q ss_pred CCCccc--------ccCCcEEEeCCccccCC----cCchhhcCCCcCcEEeccCccccccC-----CccCCCCCCCCEEE
Q 004195 245 PRFPRL--------HKKMVTLVLRNNRFQFG----LNPDELRSYNQLQKLDISLNRFVGPF-----IPSLLSLPSITYLD 307 (769)
Q Consensus 245 ~~~p~~--------~~~L~~L~l~~N~~~~~----i~p~~~~~l~~L~~L~Ls~N~l~~~~-----~~~~~~l~~L~~L~ 307 (769)
...+.. ..+|+.|++++|.++.. + +..+..+++|++|++++|.+.... +..+..+++|+.|+
T Consensus 184 ~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l-~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~ 262 (461)
T 1z7x_W 184 EAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDL-CGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLW 262 (461)
T ss_dssp HHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHH-HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEE
T ss_pred hHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHH-HHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEE
Confidence 432211 23677777777766642 2 455566677777777777665432 12223466777777
Q ss_pred ccCCcCCcc----ccccCCCCCCCcEEEccCCcCCCCCCccccc-----cCCCceEECCCCCCCh
Q 004195 308 IHGNKLTGL----LLQNMSCNPQLAFVDLSSNLLTGYLPSCLQV-----EAKTRLVLYSKNCLSN 363 (769)
Q Consensus 308 l~~N~l~~~----~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~-----~~~l~~l~l~~N~l~~ 363 (769)
+++|+++.. ++..+..+++|+.|++++|.++...+..+.. .++++.+++++|.+++
T Consensus 263 L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~ 327 (461)
T 1z7x_W 263 IWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTA 327 (461)
T ss_dssp CTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBG
T ss_pred CcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCch
Confidence 777776654 4555555667777777777665433333322 1456677777766654
No 347
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=8.3e-21 Score=188.42 Aligned_cols=178 Identities=21% Similarity=0.233 Sum_probs=110.3
Q ss_pred EEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCC
Q 004195 116 VLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS 195 (769)
Q Consensus 116 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 195 (769)
.++.+++.++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.
T Consensus 11 ~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 11 TVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp EEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 3455555553 234333 3578888888888886666667788888888888888876666667778888888888888
Q ss_pred CcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcC
Q 004195 196 LSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRS 275 (769)
Q Consensus 196 l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~ 275 (769)
+++..+..|.++++|++|+|++|++++..+. .+..
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---------------------------------------------~~~~ 122 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDG---------------------------------------------VFDK 122 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTT---------------------------------------------TTTT
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHh---------------------------------------------Hhcc
Confidence 7766666677777777777777777654433 2333
Q ss_pred CCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCcccccc
Q 004195 276 YNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVE 348 (769)
Q Consensus 276 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~ 348 (769)
+++|++|+|++|++++..+..+..+++|+.|++++|.+.+ .++.|++|+++.|+++|.+|..++.+
T Consensus 123 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 123 LTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSB
T ss_pred CCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccc
Confidence 4444444454444444333334555555555555554443 23455555666666666666555443
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=1.3e-20 Score=202.80 Aligned_cols=220 Identities=16% Similarity=0.108 Sum_probs=136.8
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCc-cccCCCcCCE-EEcccCcCCccCCccCcCCcCCCEE
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV-QISSLRNLQT-LILDDNKFTGAVPSELSLLQVLSVL 189 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L 189 (769)
++++.|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.+|++|++ ++++.|+++...|..|..+++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 5688899999998766566788899999999999988766654 5788888764 6667788887778888888888888
Q ss_pred eccCCCCcccCCccccCCCCCCEEEccC-ccccccCCC-CCCCc-cCcEEeccCCcCCCCCcccccCCcEEEeCCccccC
Q 004195 190 SLKNNSLSGFLPVSLTGLQSLRVVSLSA-NHLSGEIPD-LRNLK-NLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQF 266 (769)
Q Consensus 190 ~L~~N~l~~~~p~~l~~l~~L~~L~ls~-N~l~~~~p~-l~~l~-~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~ 266 (769)
++++|.+++..+..+....++..|++.+ |++....+. +..+. .|+.|++++|.++.
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~--------------------- 168 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE--------------------- 168 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE---------------------
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC---------------------
Confidence 8888888877777777777788888865 445543332 33333 45666666666542
Q ss_pred CcCchhhcCCCcCcEEeccC-ccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccc
Q 004195 267 GLNPDELRSYNQLQKLDISL-NRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCL 345 (769)
Q Consensus 267 ~i~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~ 345 (769)
+ |.......+|++|++++ |.+....+..|.++++|+.|+|++|+|+...+..+. +|+.|.+.++.--..+|+ +
T Consensus 169 -i-~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~---~L~~L~~l~~~~l~~lP~-l 242 (350)
T 4ay9_X 169 -I-HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE---NLKKLRARSTYNLKKLPT-L 242 (350)
T ss_dssp -E-CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT---TCCEEECTTCTTCCCCCC-T
T ss_pred -C-ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhc---cchHhhhccCCCcCcCCC-c
Confidence 2 22222334555555553 333332223455555666666666665554443333 333333333222224442 4
Q ss_pred cccCCCceEECCC
Q 004195 346 QVEAKTRLVLYSK 358 (769)
Q Consensus 346 ~~~~~l~~l~l~~ 358 (769)
..+++|+.+++++
T Consensus 243 ~~l~~L~~l~l~~ 255 (350)
T 4ay9_X 243 EKLVALMEASLTY 255 (350)
T ss_dssp TTCCSCCEEECSC
T ss_pred hhCcChhhCcCCC
Confidence 4455555555543
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.83 E-value=6.2e-20 Score=197.54 Aligned_cols=212 Identities=16% Similarity=0.110 Sum_probs=159.2
Q ss_pred EEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCC-ccCcCCcCCCE-EeccC
Q 004195 116 VLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVP-SELSLLQVLSV-LSLKN 193 (769)
Q Consensus 116 ~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L~~ 193 (769)
+++.++++++ .+|..+ .++|++|+|++|+|+...+..|.+|++|++|+|++|++.+.+| ..|.++++|+. +.++.
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 4566677775 467665 3689999999999996555679999999999999999877665 46889988875 66778
Q ss_pred CCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchh
Q 004195 194 NSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDE 272 (769)
Q Consensus 194 N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~ 272 (769)
|+++...|..|.++++|++|++++|++++..+. +....++..+++.++ |.+. .+.+..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~--------------------~~i~-~l~~~~ 148 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN--------------------INIH-TIERNS 148 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESC--------------------TTCC-EECTTS
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccc--------------------cccc-cccccc
Confidence 999988899999999999999999999865543 334445555555442 1222 232444
Q ss_pred hcCC-CcCcEEeccCccccccCCccCCCCCCCCEEEccC-CcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCC
Q 004195 273 LRSY-NQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHG-NKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAK 350 (769)
Q Consensus 273 ~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~ 350 (769)
|..+ ..++.|+|++|+|+. +++......+|+.|++++ |.++...+..|..+++|+.|||++|+|+...+..+..+..
T Consensus 149 f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~ 227 (350)
T 4ay9_X 149 FVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKK 227 (350)
T ss_dssp STTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCE
T ss_pred hhhcchhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchH
Confidence 5555 368899999999986 555555667899999975 6677666678899999999999999999766655554444
Q ss_pred Cc
Q 004195 351 TR 352 (769)
Q Consensus 351 l~ 352 (769)
++
T Consensus 228 L~ 229 (350)
T 4ay9_X 228 LR 229 (350)
T ss_dssp EE
T ss_pred hh
Confidence 33
No 350
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=1e-19 Score=183.29 Aligned_cols=136 Identities=24% Similarity=0.188 Sum_probs=124.3
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 78999999999999999999999999999999999998766677899999999999999999877888999999999999
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCc
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFP 248 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p 248 (769)
++|+++ .+|..+.++++|++|+|++|+|++..+. +..+++|+.|++++|.+.+..+
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 999999 7899999999999999999999987765 7889999999999998876554
No 351
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=2.4e-20 Score=213.83 Aligned_cols=173 Identities=25% Similarity=0.341 Sum_probs=84.8
Q ss_pred CCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCE
Q 004195 109 GSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSV 188 (769)
Q Consensus 109 ~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 188 (769)
..|++|+.|+|++|.+.. +| .|..|++|+.|+|++|+|++..| +..|++|+.|+|++|.+++ +| .+..+++|+.
T Consensus 40 ~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~ 113 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKS 113 (605)
T ss_dssp HHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCE
T ss_pred hcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCE
Confidence 344455555555555432 22 34555555555555555553322 4555555555555555543 22 3455555555
Q ss_pred EeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCc
Q 004195 189 LSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGL 268 (769)
Q Consensus 189 L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i 268 (769)
|+|++|.+++. ..+..|++|+.|+|++|++++. +.+..+++|+.|+|++|.+ ++..
T Consensus 114 L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l---------------------~~~~ 169 (605)
T 1m9s_A 114 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQI---------------------SDIV 169 (605)
T ss_dssp EECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCC---------------------CCCG
T ss_pred EEecCCCCCCC--ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcC---------------------CCch
Confidence 55555555432 2344555555555555555433 3344444444444444443 3221
Q ss_pred CchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCcc
Q 004195 269 NPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGL 316 (769)
Q Consensus 269 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 316 (769)
| +..+++|+.|+|++|+|++. +.+..+++|+.|+|++|.+++.
T Consensus 170 -~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 170 -P--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp -G--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred -h--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 2 55555666666666665552 3455566666666666655553
No 352
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.81 E-value=3.6e-21 Score=226.26 Aligned_cols=200 Identities=19% Similarity=0.185 Sum_probs=110.5
Q ss_pred CCHHHHHHHHHHHHhcCCC--CCCCCCCCCCCCCCCCCCCCCCcceEecCCCeeEEEeCCCCCCCCCCCCCCCCCCCccc
Q 004195 28 LQLFQYQTLVRIQQLLNYP--SVSSSFNTTTVTDFCNIEPTPSLTLVCYEDNLTQLHIAGDNNNNINGGLAHNFSTDTFF 105 (769)
Q Consensus 28 ~~~~~~~~ll~~k~~~~~~--~~l~~w~~~~~~~~c~~~~~~~~~v~C~~~~v~~l~l~~~~~~~~~~~l~~n~~~~~~~ 105 (769)
....++++|+++...+... .....|..... ..+.|. ++.++..+++.|++.++.....+
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~s~~~~~~l~L~~n~~~~~~------------- 189 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDST-PSGTAT-----NSAVSTPLTPKIELFANGKDEAN------------- 189 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCC-ccccCC-----CceecCCccceEEeeCCCCCcch-------------
Confidence 4456778999999876322 12344543321 345664 35666677888888765543211
Q ss_pred cccCCCCC-----CcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccC
Q 004195 106 STLGSLSS-----LKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSEL 180 (769)
Q Consensus 106 ~~~~~l~~-----L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 180 (769)
..+..... +..++++.|.+. ..|..|..+.+|+.|+|++|.+. .+|..+.+|++|++|+|++|.|+ .+|..|
T Consensus 190 ~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~ 266 (727)
T 4b8c_D 190 QALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEI 266 (727)
T ss_dssp ---------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGG
T ss_pred hhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhh
Confidence 11111111 122233334433 45778888999999999999988 68888888999999999999998 888889
Q ss_pred cCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCccc
Q 004195 181 SLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRL 250 (769)
Q Consensus 181 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~ 250 (769)
++|++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+..+..++.+++|+.|+|++|.|++.+|..
T Consensus 267 ~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~ 335 (727)
T 4b8c_D 267 KNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKI 335 (727)
T ss_dssp GGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHH
T ss_pred hCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHH
Confidence 99999999999999998 6788899999999999999998755456888888888888888887766654
No 353
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.7e-19 Score=188.78 Aligned_cols=171 Identities=25% Similarity=0.320 Sum_probs=89.4
Q ss_pred CCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEE
Q 004195 134 HSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVV 213 (769)
Q Consensus 134 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 213 (769)
.+++|++|++++|.++. +| .+..+++|++|+|++|++++..| +..+++|++|+|++|.+++ + ..+.++++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-L-SSLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-G-GGGTTCTTCCEE
T ss_pred hcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-C-hhhccCCCCCEE
Confidence 44445555555555442 22 24445555555555555543222 4555555555555555543 1 225555555555
Q ss_pred EccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccC
Q 004195 214 SLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPF 293 (769)
Q Consensus 214 ~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~ 293 (769)
++++|++++ ++.+..+++|+.|++++|.+++ + ..+..+++|+.|+|++|++++..
T Consensus 118 ~L~~n~i~~-~~~l~~l~~L~~L~l~~n~l~~----------------------~--~~l~~l~~L~~L~L~~N~l~~~~ 172 (291)
T 1h6t_A 118 SLEHNGISD-INGLVHLPQLESLYLGNNKITD----------------------I--TVLSRLTKLDTLSLEDNQISDIV 172 (291)
T ss_dssp ECTTSCCCC-CGGGGGCTTCCEEECCSSCCCC----------------------C--GGGGGCTTCSEEECCSSCCCCCG
T ss_pred ECCCCcCCC-ChhhcCCCCCCEEEccCCcCCc----------------------c--hhhccCCCCCEEEccCCccccch
Confidence 555555544 2344445555555554444431 1 23445556666666666665533
Q ss_pred CccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCC
Q 004195 294 IPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTG 339 (769)
Q Consensus 294 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g 339 (769)
+ +..+++|+.|++++|++++. + .+..+++|+.|++++|.++.
T Consensus 173 ~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 173 P--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp G--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred h--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 3 56666666666666666653 2 35666667777777776664
No 354
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.6e-19 Score=206.94 Aligned_cols=198 Identities=22% Similarity=0.257 Sum_probs=156.9
Q ss_pred CCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEe
Q 004195 111 LSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190 (769)
Q Consensus 111 l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 190 (769)
+..+..++|..+.+...++ +..|.+|+.|+|++|.++. +| .|..|++|+.|+|++|++++..| +..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 4455566677777765543 5678888889999998874 44 58888899999999998886544 88888888999
Q ss_pred ccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCc
Q 004195 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNP 270 (769)
Q Consensus 191 L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p 270 (769)
|++|.+++ +| .+..+++|+.|+|++|++++ ++.+..+++|+.|+|++|.++ + +
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~Ls~N~l~---------------------~-l-- 146 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-INGLVHLPQLESLYLGNNKIT---------------------D-I-- 146 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CGGGGGCTTCSEEECCSSCCC---------------------C-C--
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-CccccCCCccCEEECCCCccC---------------------C-c--
Confidence 98888885 33 68888888888888888876 456777777777777766654 2 2
Q ss_pred hhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccc
Q 004195 271 DELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCL 345 (769)
Q Consensus 271 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~ 345 (769)
..+..+++|+.|+|++|.+.+..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++.....+
T Consensus 147 ~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~ 217 (605)
T 1m9s_A 147 TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQ 217 (605)
T ss_dssp GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCC
T ss_pred hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCccccc
Confidence 467889999999999999998665 99999999999999999985 468899999999999999987644433
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=2.1e-19 Score=187.95 Aligned_cols=176 Identities=25% Similarity=0.322 Sum_probs=147.8
Q ss_pred ccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCC
Q 004195 107 TLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVL 186 (769)
Q Consensus 107 ~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 186 (769)
.+..+++|+.|++++|.+... | .+..+++|++|+|++|++++..| +.++++|++|+|++|++++ +| .+..+++|
T Consensus 41 ~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L 114 (291)
T 1h6t_A 41 TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKL 114 (291)
T ss_dssp CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTC
T ss_pred chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCC
Confidence 356789999999999998654 4 48999999999999999996544 9999999999999999985 33 49999999
Q ss_pred CEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccC
Q 004195 187 SVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQF 266 (769)
Q Consensus 187 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~ 266 (769)
++|+|++|.+++. ..+..+++|+.|++++|++++. +.+..+++|+.|++++|.+++
T Consensus 115 ~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~--------------------- 170 (291)
T 1h6t_A 115 KSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISD--------------------- 170 (291)
T ss_dssp CEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCC---------------------
T ss_pred CEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCcccc---------------------
Confidence 9999999999864 5788999999999999999875 667788888877777776642
Q ss_pred CcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccc
Q 004195 267 GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLL 317 (769)
Q Consensus 267 ~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 317 (769)
+ +. +..+++|+.|+|++|.+++. +.+..+++|+.|++++|.++...
T Consensus 171 -~-~~-l~~l~~L~~L~L~~N~i~~l--~~l~~l~~L~~L~l~~n~i~~~~ 216 (291)
T 1h6t_A 171 -I-VP-LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKP 216 (291)
T ss_dssp -C-GG-GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEEEEEEEEECCC
T ss_pred -c-hh-hcCCCccCEEECCCCcCCCC--hhhccCCCCCEEECcCCcccCCc
Confidence 2 22 77889999999999999873 45899999999999999988743
No 356
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=7.6e-22 Score=225.00 Aligned_cols=190 Identities=20% Similarity=0.221 Sum_probs=116.7
Q ss_pred cCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCc-------------CCccCCccCcCCcCCCEEe-ccCC----
Q 004195 133 AHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNK-------------FTGAVPSELSLLQVLSVLS-LKNN---- 194 (769)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N---- 194 (769)
..+++|+.|+|++|+|+ .+|.++++|++|+.|++++|. +.+.+|..++++++|+.|+ ++.|
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~ 424 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD 424 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch
Confidence 34555555555555554 455555555555555554443 3445555555555555555 4443
Q ss_pred ---------CCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCcccc
Q 004195 195 ---------SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQ 265 (769)
Q Consensus 195 ---------~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~ 265 (769)
.++...+ ..|+.|+|++|+|++ +|.++.+++|+.|++++|.+ +
T Consensus 425 L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~~~~l~~L~~L~Ls~N~l---------------------~ 476 (567)
T 1dce_A 425 LRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCHLEQLLLVTHLDLSHNRL---------------------R 476 (567)
T ss_dssp HHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCCGGGGTTCCEEECCSSCC---------------------C
T ss_pred hhhhhhhcccccccCc------cCceEEEecCCCCCC-CcCccccccCcEeecCcccc---------------------c
Confidence 3332111 135566666666654 34455555555555555444 4
Q ss_pred CCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccc-cccCCCCCCCcEEEccCCcCCCCCCcc
Q 004195 266 FGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLL-LQNMSCNPQLAFVDLSSNLLTGYLPSC 344 (769)
Q Consensus 266 ~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~l~l~~N~l~g~~p~~ 344 (769)
.+ |..++.+++|+.|+|++|+|++ +| .++++++|+.|+|++|+|++.. |..++.+++|+.|+|++|++++.+|..
T Consensus 477 -~l-p~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 477 -AL-PPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp -CC-CGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred -cc-chhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 44 6777888888888888888887 45 7888888888888888888876 788888888888888888888776643
Q ss_pred c---cccCCCceEE
Q 004195 345 L---QVEAKTRLVL 355 (769)
Q Consensus 345 ~---~~~~~l~~l~ 355 (769)
. ..+++++.|+
T Consensus 553 ~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 553 ERLAEMLPSVSSIL 566 (567)
T ss_dssp THHHHHCTTCSEEE
T ss_pred HHHHHHCcccCccC
Confidence 2 2245566554
No 357
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=1.1e-18 Score=174.50 Aligned_cols=136 Identities=20% Similarity=0.247 Sum_probs=121.4
Q ss_pred CCCcEEEeecccccCCCC-ccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEe
Q 004195 112 SSLKVLSLVSLGLWGPLP-GSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLS 190 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 190 (769)
..++.|+|++|++++..| ..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 32 ~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 111 (220)
T 2v70_A 32 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLM 111 (220)
T ss_dssp TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEE
T ss_pred CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEE
Confidence 346899999999988755 5689999999999999999988888999999999999999999988888899999999999
Q ss_pred ccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCC
Q 004195 191 LKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRF 247 (769)
Q Consensus 191 L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~ 247 (769)
|++|++++..|..|.++++|++|+|++|++++..|. +..+++|+.|++++|.+.+..
T Consensus 112 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 112 LRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp CTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 999999999999999999999999999999988664 788888888888888876543
No 358
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=4.3e-19 Score=177.49 Aligned_cols=134 Identities=24% Similarity=0.287 Sum_probs=122.6
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
++|+.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 57999999999999888889999999999999999999888999999999999999999999766677899999999999
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCC
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGP 245 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~ 245 (769)
++|++++..|..|.++++|+.|+|++|+|++..+. +..+++|+.|++++|.+..
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 99999999999999999999999999999988775 7888888888888887753
No 359
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=1e-18 Score=174.86 Aligned_cols=69 Identities=19% Similarity=0.220 Sum_probs=40.7
Q ss_pred hhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCC
Q 004195 272 ELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGY 340 (769)
Q Consensus 272 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~ 340 (769)
.|..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|.+++.
T Consensus 100 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 100 MFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp GGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred HhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 344455555555555555555555555666666666666666665566666666666666666666543
No 360
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=1e-18 Score=174.71 Aligned_cols=151 Identities=21% Similarity=0.295 Sum_probs=78.0
Q ss_pred eeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCcc
Q 004195 140 ILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANH 219 (769)
Q Consensus 140 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~ 219 (769)
.+++++|.++ .+|..+. ++|+.|+|++|+|++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4445555554 3444333 445555555555554444455555555555555555555555555555555555555555
Q ss_pred ccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCC
Q 004195 220 LSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLS 299 (769)
Q Consensus 220 l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 299 (769)
|++.. +..|..+++|++|+|++|++++..|..|..
T Consensus 92 l~~l~---------------------------------------------~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~ 126 (220)
T 2v9t_B 92 ITELP---------------------------------------------KSLFEGLFSLQLLLLNANKINCLRVDAFQD 126 (220)
T ss_dssp CCCCC---------------------------------------------TTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCccC---------------------------------------------HhHccCCCCCCEEECCCCCCCEeCHHHcCC
Confidence 54322 222333444444444444444444444555
Q ss_pred CCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCC
Q 004195 300 LPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLT 338 (769)
Q Consensus 300 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 338 (769)
+++|+.|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 127 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 127 LHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 555555555555555555555555555555555555554
No 361
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=3.7e-19 Score=192.26 Aligned_cols=111 Identities=25% Similarity=0.144 Sum_probs=77.5
Q ss_pred CCcEEEeecccccCCCCcccc-CCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 113 SLKVLSLVSLGLWGPLPGSIA-HSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 113 ~L~~L~L~~n~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
.++.|+|++|++++..+..|. ++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 119 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLL 119 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEEC
Confidence 466777777777666666665 6777777777777777666666777777777777777777666666777777777777
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCcccccc
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGE 223 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~ 223 (769)
++|++++..|..|.++++|+.|+|++|+|++.
T Consensus 120 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l 151 (361)
T 2xot_A 120 YNNHIVVVDRNAFEDMAQLQKLYLSQNQISRF 151 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCSC
T ss_pred CCCcccEECHHHhCCcccCCEEECCCCcCCee
Confidence 77777766666677777777777777766653
No 362
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=7.6e-20 Score=187.77 Aligned_cols=136 Identities=10% Similarity=0.105 Sum_probs=105.1
Q ss_pred CCCcCccccCCceeEEEEEe-CCCcE--EEEEEccccCCCC------------------------hhHHHHHHHHHhhcc
Q 004195 482 FDSSSFMCDASHGQIYKGKL-TDGTL--VAIRSLKMSKKSS------------------------PHMYTYHIELISKLR 534 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~-~~g~~--vAvK~~~~~~~~~------------------------~~~~~~Ei~~l~~l~ 534 (769)
|+..+.||+|+||.||+|+. .+|+. ||||+++...... ...+.+|++++.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999997 68988 9999875431110 125788999999998
Q ss_pred CCce--eeEeeeeeccCCCCCCcceEEEEEeccCC-C----chhhhhcCCCCCCCHHHHHHHHHHHHHHhcccc-cCCCC
Q 004195 535 HSNL--VSALGHCLDFSLDDPSISIIYLIFEYAPN-E----TLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLH-TGIVP 606 (769)
Q Consensus 535 H~nI--v~l~~~~~~~~~~~~~~~~~~lV~Ey~~~-g----sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~ 606 (769)
|+++ ..++++. ..++||||+.+ | +|.++... .++.....++.|++.||+||| +.
T Consensus 129 ~~~i~~p~~~~~~-----------~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~--- 190 (258)
T 1zth_A 129 EAGVSVPQPYTYM-----------KNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQEA--- 190 (258)
T ss_dssp HTTCCCCCEEEEE-----------TTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTS---
T ss_pred hCCCCCCeEEEcC-----------CCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHC---
Confidence 8864 3444321 14899999942 4 66665432 234567789999999999999 88
Q ss_pred CccccCccccceeeCCCceeeecCCCCchhh
Q 004195 607 GVFSNNLKITDVLLDENFHVKINSYNLPLLA 637 (769)
Q Consensus 607 ~ivHrDlKp~NILld~~~~~kl~DFGla~~~ 637 (769)
+|+||||||+|||+++ .++|+|||+|...
T Consensus 191 givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 191 ELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999999998 9999999998643
No 363
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=4.7e-19 Score=191.47 Aligned_cols=127 Identities=25% Similarity=0.293 Sum_probs=93.7
Q ss_pred cEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCcccc-CCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccC
Q 004195 115 KVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQIS-SLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKN 193 (769)
Q Consensus 115 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 193 (769)
+++++++|+++. +|..+. ..+++|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 578888888854 566554 3578888888888877676676 788888888888888877777788888888888888
Q ss_pred CCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCC
Q 004195 194 NSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFG 244 (769)
Q Consensus 194 N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~ 244 (769)
|+|++..+..|.++++|++|+|++|+|++..|. +..+++|+.|++++|.++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 149 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS 149 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC
Confidence 888877777788888888888888887765443 555555555555555443
No 364
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=3.2e-18 Score=172.33 Aligned_cols=102 Identities=25% Similarity=0.318 Sum_probs=66.3
Q ss_pred EEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCC
Q 004195 117 LSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSL 196 (769)
Q Consensus 117 L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 196 (769)
++.+++++ +.+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|++|+|++|++
T Consensus 24 v~c~~~~l-~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l 100 (229)
T 3e6j_A 24 VDCRSKRH-ASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQL 100 (229)
T ss_dssp EECTTSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred eEccCCCc-CccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcC
Confidence 34444444 34454443 6677777777777776677777777777777777777655555566777777777777777
Q ss_pred cccCCccccCCCCCCEEEccCcccc
Q 004195 197 SGFLPVSLTGLQSLRVVSLSANHLS 221 (769)
Q Consensus 197 ~~~~p~~l~~l~~L~~L~ls~N~l~ 221 (769)
++..+..|..+++|++|+|++|+|+
T Consensus 101 ~~l~~~~~~~l~~L~~L~Ls~N~l~ 125 (229)
T 3e6j_A 101 TVLPSAVFDRLVHLKELFMCCNKLT 125 (229)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CccChhHhCcchhhCeEeccCCccc
Confidence 6655555666666666666666655
No 365
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=8.7e-19 Score=172.19 Aligned_cols=131 Identities=21% Similarity=0.264 Sum_probs=95.3
Q ss_pred CCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCE
Q 004195 109 GSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSV 188 (769)
Q Consensus 109 ~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 188 (769)
+.+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|+|++|++++..|..|+.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 56777888888888886 455 5788888888888888665 3347778888888888888887777777888888888
Q ss_pred EeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcC
Q 004195 189 LSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYF 243 (769)
Q Consensus 189 L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l 243 (769)
|+|++|.+++..|..++++++|++|++++|.+.+.+|.+..+++|+.|++++|.+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i 171 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGV 171 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBCC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCCC
Confidence 8888888887777777888888888888877333444555555555555555444
No 366
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=7.5e-19 Score=180.86 Aligned_cols=170 Identities=21% Similarity=0.292 Sum_probs=97.4
Q ss_pred CCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEE
Q 004195 135 SSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVS 214 (769)
Q Consensus 135 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 214 (769)
+.++..+++++|.+++ ++ .+..+++|++|+|++|.++ .+| .+..+++|++|+|++|++++..| +.++++|+.|+
T Consensus 18 l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 4445555555555553 22 4555556666666666555 333 45555666666666666654333 55666666666
Q ss_pred ccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCC
Q 004195 215 LSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFI 294 (769)
Q Consensus 215 ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~ 294 (769)
|++|++++ +|.+.. ++|+.|++++|.++ + + +.+..+++|+.|+|++|++++.
T Consensus 92 L~~N~l~~-l~~~~~-~~L~~L~L~~N~l~---------------------~-~--~~l~~l~~L~~L~Ls~N~i~~~-- 143 (263)
T 1xeu_A 92 VNRNRLKN-LNGIPS-ACLSRLFLDNNELR---------------------D-T--DSLIHLKNLEILSIRNNKLKSI-- 143 (263)
T ss_dssp CCSSCCSC-CTTCCC-SSCCEEECCSSCCS---------------------B-S--GGGTTCTTCCEEECTTSCCCBC--
T ss_pred CCCCccCC-cCcccc-CcccEEEccCCccC---------------------C-C--hhhcCcccccEEECCCCcCCCC--
Confidence 66666654 222222 44444444444332 1 1 2355666677777777776653
Q ss_pred ccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCC
Q 004195 295 PSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGY 340 (769)
Q Consensus 295 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~ 340 (769)
+.+..+++|+.|+|++|++++. ..+..+++|+.|++++|.+++.
T Consensus 144 ~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 144 VMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp GGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred hHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 3566667777777777777665 5566677777777777777654
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=7.9e-19 Score=180.70 Aligned_cols=172 Identities=23% Similarity=0.292 Sum_probs=136.1
Q ss_pred CCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEE
Q 004195 110 SLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVL 189 (769)
Q Consensus 110 ~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 189 (769)
.+.++..+++++|.+++.. .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++..| +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4666777888888886543 5788889999999999988 466 78889999999999999886444 8889999999
Q ss_pred eccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcC
Q 004195 190 SLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLN 269 (769)
Q Consensus 190 ~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~ 269 (769)
+|++|++++. |.. .. ++|+.|+|++|++++ ++.+..+++|+.|++++|.+++ +
T Consensus 91 ~L~~N~l~~l-~~~-~~-~~L~~L~L~~N~l~~-~~~l~~l~~L~~L~Ls~N~i~~----------------------~- 143 (263)
T 1xeu_A 91 SVNRNRLKNL-NGI-PS-ACLSRLFLDNNELRD-TDSLIHLKNLEILSIRNNKLKS----------------------I- 143 (263)
T ss_dssp ECCSSCCSCC-TTC-CC-SSCCEEECCSSCCSB-SGGGTTCTTCCEEECTTSCCCB----------------------C-
T ss_pred ECCCCccCCc-Ccc-cc-CcccEEEccCCccCC-ChhhcCcccccEEECCCCcCCC----------------------C-
Confidence 9999998863 432 23 889999999999886 4567788888877777776642 2
Q ss_pred chhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccc
Q 004195 270 PDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLL 317 (769)
Q Consensus 270 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 317 (769)
+ .+..+++|+.|+|++|++++. ..+..+++|+.|++++|.+++..
T Consensus 144 ~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 144 V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCCc
Confidence 2 567788899999999988875 67888899999999999887753
No 368
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=2.1e-19 Score=211.27 Aligned_cols=219 Identities=21% Similarity=0.182 Sum_probs=104.7
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCc-----eeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCC
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLE-----ILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVL 186 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~-----~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 186 (769)
+.++.|+|.+|.+... |..+.....|. .++++.|++. ..|..|..+++|+.|+|++|.+. .+|..+.++++|
T Consensus 173 ~~~~~l~L~~n~~~~~-~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCcc-hhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 5577888888887653 43332222222 2333444444 55788999999999999999998 788888899999
Q ss_pred CEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccC
Q 004195 187 SVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQF 266 (769)
Q Consensus 187 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~ 266 (769)
++|+|++|.|+ .+|..|++|++|++|+|++|+|+..+..++.|++|++|+|++|.|+
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~---------------------- 306 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT---------------------- 306 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC----------------------
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC----------------------
Confidence 99999999999 7899999999999999999999954445888888888888888775
Q ss_pred CcCchhhcCCCcCcEEeccCccccccCCccCCCCCC-CCEEEccCCcCCccccccCCCCCCCcEEEccCC--------cC
Q 004195 267 GLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPS-ITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSN--------LL 337 (769)
Q Consensus 267 ~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N--------~l 337 (769)
.+ |..|..+++|++|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|.. |..|+++.| .|
T Consensus 307 ~l-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l 379 (727)
T 4b8c_D 307 TL-PWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSL 379 (727)
T ss_dssp CC-CSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-------------------------
T ss_pred cc-ChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCc
Confidence 23 444555666666666666666655555433221 123556666666655543 334444444 33
Q ss_pred CCCCCccccccCCCceEECCCCCCCh
Q 004195 338 TGYLPSCLQVEAKTRLVLYSKNCLSN 363 (769)
Q Consensus 338 ~g~~p~~~~~~~~l~~l~l~~N~l~~ 363 (769)
.+..+..+..+..+....++.|.+.+
T Consensus 380 ~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 380 QQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp ----------------------CCCG
T ss_pred cccccchhhcccccceeeeecccccc
Confidence 33333333444455556667776654
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=8.5e-18 Score=165.08 Aligned_cols=106 Identities=21% Similarity=0.266 Sum_probs=67.5
Q ss_pred ccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCC
Q 004195 132 IAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLR 211 (769)
Q Consensus 132 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 211 (769)
.+.+++|++|++++|.++ .+| .+..+++|++|+|++|.++ .+..+..+++|++|+|++|.+++..|..++++++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 356677777777777777 455 5777777777777777554 234667777777777777777766666677777777
Q ss_pred EEEccCccccccCCC-CCCCccCcEEeccCC
Q 004195 212 VVSLSANHLSGEIPD-LRNLKNLRVFDVQDN 241 (769)
Q Consensus 212 ~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N 241 (769)
+|++++|++++..+. +..+++|+.|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n 146 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYN 146 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCC
Confidence 777777766653222 334444443333333
No 370
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=6.6e-18 Score=165.04 Aligned_cols=113 Identities=25% Similarity=0.244 Sum_probs=91.8
Q ss_pred CCcEEEeecccccCCCCc-cccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 113 SLKVLSLVSLGLWGPLPG-SIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 113 ~L~~L~L~~n~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
+|+.|+|++|++++..+. .|+++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 778888888888776654 4788888888888888888877888888888888888888888777777888888888888
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccccCC
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP 225 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 225 (769)
++|++++.+|..|..+++|++|+|++|.+++..+
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 8888888888888888888888888888876543
No 371
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.72 E-value=3.2e-20 Score=211.63 Aligned_cols=189 Identities=23% Similarity=0.188 Sum_probs=162.4
Q ss_pred cCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCC-------------CcccCCccccCCCCCCEEE-ccCccccc
Q 004195 157 SSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNS-------------LSGFLPVSLTGLQSLRVVS-LSANHLSG 222 (769)
Q Consensus 157 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~l~~l~~L~~L~-ls~N~l~~ 222 (769)
..+++|+.|+|++|+++ .+|.++++|++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 67899999999999997 889999999999999998875 6677788888888888888 6776542
Q ss_pred cCCCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCC
Q 004195 223 EIPDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPS 302 (769)
Q Consensus 223 ~~p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 302 (769)
+|..+.+++|.++...+ ..|+.|+|++|.+++ + |. +..+++|+.|+|++|+|+ .+|..++++++
T Consensus 424 ---------~L~~l~l~~n~i~~l~~---~~L~~L~Ls~n~l~~-l-p~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~ 487 (567)
T 1dce_A 424 ---------DLRSKFLLENSVLKMEY---ADVRVLHLAHKDLTV-L-CH-LEQLLLVTHLDLSHNRLR-ALPPALAALRC 487 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHHH---TTCSEEECTTSCCSS-C-CC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTT
T ss_pred ---------hhhhhhhhcccccccCc---cCceEEEecCCCCCC-C-cC-ccccccCcEeecCccccc-ccchhhhcCCC
Confidence 45555666666543222 247889999999985 5 65 999999999999999999 68999999999
Q ss_pred CCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCC-CccccccCCCceEECCCCCCChhh
Q 004195 303 ITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYL-PSCLQVEAKTRLVLYSKNCLSNEE 365 (769)
Q Consensus 303 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~-p~~~~~~~~l~~l~l~~N~l~~~~ 365 (769)
|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.+ |..+..+++|+.+++++|.+++.+
T Consensus 488 L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 488 LEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp CCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred CCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 9999999999998 56 8999999999999999999988 999999999999999999997753
No 372
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=4.4e-17 Score=159.19 Aligned_cols=131 Identities=23% Similarity=0.312 Sum_probs=115.5
Q ss_pred cEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCc-cccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccC
Q 004195 115 KVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPV-QISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKN 193 (769)
Q Consensus 115 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 193 (769)
+.+++++|++ +.+|..+.. +|++|+|++|+|++..+. .|+.+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 5678888888 567776654 899999999999976664 489999999999999999999999999999999999999
Q ss_pred CCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCc
Q 004195 194 NSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFP 248 (769)
Q Consensus 194 N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p 248 (769)
|++++..|..|.++++|++|+|++|+|++.+|. +..+++|+.|++++|.+.+..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999999999999999999999999999998775 7888999999998888876544
No 373
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.70 E-value=3.4e-17 Score=156.32 Aligned_cols=133 Identities=23% Similarity=0.221 Sum_probs=118.8
Q ss_pred CCCCCcEEEeeccccc-CCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCE
Q 004195 110 SLSSLKVLSLVSLGLW-GPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSV 188 (769)
Q Consensus 110 ~l~~L~~L~L~~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 188 (769)
..++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..|..+++|++|+|++|++++.+|..+.++++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3478999999999998 78899899999999999999999965 78999999999999999999888888888999999
Q ss_pred EeccCCCCcccC-CccccCCCCCCEEEccCccccccCC----CCCCCccCcEEeccCCcCC
Q 004195 189 LSLKNNSLSGFL-PVSLTGLQSLRVVSLSANHLSGEIP----DLRNLKNLRVFDVQDNYFG 244 (769)
Q Consensus 189 L~L~~N~l~~~~-p~~l~~l~~L~~L~ls~N~l~~~~p----~l~~l~~L~~l~l~~N~l~ 244 (769)
|+|++|.+++.. +..+.++++|+.|++++|.+++..+ .+..+++|+.|++++|.+.
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 999999998643 2789999999999999999998777 5888999999999998775
No 374
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.70 E-value=1.2e-18 Score=201.61 Aligned_cols=255 Identities=13% Similarity=0.069 Sum_probs=129.5
Q ss_pred cccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccC---CcCCccccCCCcCCEEEcccCcCCccCCccC
Q 004195 104 FFSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLS---GSIPVQISSLRNLQTLILDDNKFTGAVPSEL 180 (769)
Q Consensus 104 ~~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~---g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 180 (769)
++..+.++++|+.|+|++|.+.+ +|..+.++++|++|+++.+... +..+..+..+++|+.|+++++. .+.+|..+
T Consensus 212 l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~ 289 (592)
T 3ogk_B 212 LETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILF 289 (592)
T ss_dssp HHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGG
T ss_pred HHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHH
Confidence 34455678889999998888765 5677777788888877753322 2333455556666666666543 23455556
Q ss_pred cCCcCCCEEeccCCCCcccCC-ccccCCCCCCEEEccCcccc-ccCCC-CCCCccCcEEecc------------------
Q 004195 181 SLLQVLSVLSLKNNSLSGFLP-VSLTGLQSLRVVSLSANHLS-GEIPD-LRNLKNLRVFDVQ------------------ 239 (769)
Q Consensus 181 ~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~ls~N~l~-~~~p~-l~~l~~L~~l~l~------------------ 239 (769)
..+++|++|+|++|.+++... ..+.++++|+.|+++ |.+. +.++. ...+++|+.|+++
T Consensus 290 ~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~ 368 (592)
T 3ogk_B 290 PFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQR 368 (592)
T ss_dssp GGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHH
T ss_pred hhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHH
Confidence 666666666666666543322 224555556666555 2222 11221 1234445555554
Q ss_pred ------------------CCcCCCCCcc----cccCCcEEEeC----CccccCC-----cCchhhcCCCcCcEEeccCc-
Q 004195 240 ------------------DNYFGPRFPR----LHKKMVTLVLR----NNRFQFG-----LNPDELRSYNQLQKLDISLN- 287 (769)
Q Consensus 240 ------------------~N~l~~~~p~----~~~~L~~L~l~----~N~~~~~-----i~p~~~~~l~~L~~L~Ls~N- 287 (769)
.|.+++..+. ..++|+.|+++ .|.+++. + +..+..+++|++|+|+++
T Consensus 369 ~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~-~~~~~~~~~L~~L~L~~~~ 447 (592)
T 3ogk_B 369 GLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGV-RSLLIGCKKLRRFAFYLRQ 447 (592)
T ss_dssp HHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHH-HHHHHHCTTCCEEEEECCG
T ss_pred HHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHH-HHHHHhCCCCCEEEEecCC
Confidence 4444332221 12345555553 3444431 1 122344555555555422
Q ss_pred -cccccCCccCC-CCCCCCEEEccCCcCCc-cccccCCCCCCCcEEEccCCcCCCC-CCccccccCCCceEECCCCCCC
Q 004195 288 -RFVGPFIPSLL-SLPSITYLDIHGNKLTG-LLLQNMSCNPQLAFVDLSSNLLTGY-LPSCLQVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 288 -~l~~~~~~~~~-~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~l~l~~N~l~g~-~p~~~~~~~~l~~l~l~~N~l~ 362 (769)
.+++..+..+. .+++|+.|+|++|++++ .++..+..+++|+.|+|++|.+++. ++.....+++++.+++++|.++
T Consensus 448 ~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 448 GGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp GGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCC
T ss_pred CCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCC
Confidence 23333232222 24556666666665554 2233344555566666666655432 2233334555566666655544
No 375
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.68 E-value=3e-17 Score=153.33 Aligned_cols=128 Identities=23% Similarity=0.246 Sum_probs=113.6
Q ss_pred CCCCcEEEeeccccc-CCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEE
Q 004195 111 LSSLKVLSLVSLGLW-GPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVL 189 (769)
Q Consensus 111 l~~L~~L~L~~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 189 (769)
.++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++++++|++|+|++|++++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 478999999999998 78999999999999999999999875 789999999999999999998888888889999999
Q ss_pred eccCCCCccc-CCccccCCCCCCEEEccCccccccCC----CCCCCccCcEEeccC
Q 004195 190 SLKNNSLSGF-LPVSLTGLQSLRVVSLSANHLSGEIP----DLRNLKNLRVFDVQD 240 (769)
Q Consensus 190 ~L~~N~l~~~-~p~~l~~l~~L~~L~ls~N~l~~~~p----~l~~l~~L~~l~l~~ 240 (769)
+|++|.+++. .+..++++++|++|++++|.+++..+ .+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999874 45789999999999999999998766 377888999888764
No 376
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.66 E-value=6.1e-17 Score=172.35 Aligned_cols=134 Identities=10% Similarity=0.137 Sum_probs=98.2
Q ss_pred CCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCC--------------CChhHH--------HHHHHHHhhccCCce
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKK--------------SSPHMY--------TYHIELISKLRHSNL 538 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~--------------~~~~~~--------~~Ei~~l~~l~H~nI 538 (769)
-|++.+.||+|++|.||+|...+|+.||||+++.... ...... .+|...|.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3888999999999999999998999999998764210 011122 245555555544433
Q ss_pred e--eEeeeeeccCCCCCCcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCcccc
Q 004195 539 V--SALGHCLDFSLDDPSISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKIT 616 (769)
Q Consensus 539 v--~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~ 616 (769)
. ..+++. ..+|||||+++++|.++.... ....++.|++.+|.|||+. +||||||||.
T Consensus 176 ~vp~p~~~~-----------~~~LVME~i~G~~L~~l~~~~-------~~~~l~~qll~~l~~lH~~---gIVHrDLKp~ 234 (397)
T 4gyi_A 176 PVPEPIAQS-----------RHTIVMSLVDALPMRQVSSVP-------DPASLYADLIALILRLAKH---GLIHGDFNEF 234 (397)
T ss_dssp SCCCEEEEE-----------TTEEEEECCSCEEGGGCCCCS-------CHHHHHHHHHHHHHHHHHT---TEECSCCSTT
T ss_pred CCCeeeecc-----------CceEEEEecCCccHhhhcccH-------HHHHHHHHHHHHHHHHHHC---CCcCCCCCHH
Confidence 2 222211 027999999999988765421 2346789999999999998 9999999999
Q ss_pred ceeeCCCc----------eeeecCCCCch
Q 004195 617 DVLLDENF----------HVKINSYNLPL 635 (769)
Q Consensus 617 NILld~~~----------~~kl~DFGla~ 635 (769)
|||+++++ .+.|+||+-+.
T Consensus 235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V 263 (397)
T 4gyi_A 235 NILIREEKDAEDPSSITLTPIIIXFPQMV 263 (397)
T ss_dssp SEEEEEEECSSCTTSEEEEEEECCCTTCE
T ss_pred HEEEeCCCCcccccccccceEEEEeCCcc
Confidence 99998776 48999999764
No 377
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.65 E-value=4.8e-18 Score=196.37 Aligned_cols=243 Identities=10% Similarity=-0.001 Sum_probs=123.3
Q ss_pred CCcEEEeeccc-cc-CCCCccccCCCcCceeeccCcccCCc----CCccccCCCcCCEEEcccCcCC----ccCCccCcC
Q 004195 113 SLKVLSLVSLG-LW-GPLPGSIAHSSSLEILNLSSNYLSGS----IPVQISSLRNLQTLILDDNKFT----GAVPSELSL 182 (769)
Q Consensus 113 ~L~~L~L~~n~-l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~----~~~p~~~~~ 182 (769)
+|++|+|++|. ++ ..++..+.++++|++|+|++|.+++. ++..+.++++|++|+|++|.++ +.++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 37777776665 11 11222334666777777777776554 3334456667777777777765 233444556
Q ss_pred CcCCCEEeccCCCCcccCCccccCCCCCCEEEccCcccc----ccCCCCCCCccCcEEeccCCcCCCCCccc---ccCCc
Q 004195 183 LQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLS----GEIPDLRNLKNLRVFDVQDNYFGPRFPRL---HKKMV 255 (769)
Q Consensus 183 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~----~~~p~l~~l~~L~~l~l~~N~l~~~~p~~---~~~L~ 255 (769)
+++|+.|+|++|.+.+ +|..+.++++|+.|+++.+... .....+..+++|+.++++++. .+.+|.. .++|+
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~ 296 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIR 296 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCC
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCc
Confidence 6777777777776664 5566666677777766642221 011124555556666655532 2223322 34556
Q ss_pred EEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEcc-----------CCcCCccc-cccCCC
Q 004195 256 TLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIH-----------GNKLTGLL-LQNMSC 323 (769)
Q Consensus 256 ~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~-----------~N~l~~~~-~~~~~~ 323 (769)
+|+|++|.++....+..+..+++|++|+++++...+.++..+..+++|+.|+++ .|.+++.. +.....
T Consensus 297 ~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~ 376 (592)
T 3ogk_B 297 KLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQG 376 (592)
T ss_dssp EEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHH
T ss_pred EEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhh
Confidence 666666654432211224555566666655222222222222345555555555 24444321 111223
Q ss_pred CCCCcEEEccCCcCCCCCCccccc-cCCCceEECC
Q 004195 324 NPQLAFVDLSSNLLTGYLPSCLQV-EAKTRLVLYS 357 (769)
Q Consensus 324 l~~L~~l~l~~N~l~g~~p~~~~~-~~~l~~l~l~ 357 (769)
+++|+.|+++.|.+++..+..+.. +++++.++++
T Consensus 377 ~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~ 411 (592)
T 3ogk_B 377 CQELEYMAVYVSDITNESLESIGTYLKNLCDFRLV 411 (592)
T ss_dssp CTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEE
T ss_pred CccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEe
Confidence 455555555555555544444333 4455555553
No 378
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=3.8e-16 Score=150.39 Aligned_cols=114 Identities=26% Similarity=0.232 Sum_probs=84.7
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEec
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSL 191 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 191 (769)
++|+.|+|++|++++..+..|+++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 56778888888877666666777888888888888887665666777788888888888877666666777777777777
Q ss_pred cCCCCcccCCccccCCCCCCEEEccCccccccCC
Q 004195 192 KNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP 225 (769)
Q Consensus 192 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 225 (769)
++|.+++..+..+.++++|+.|+|++|.+++..|
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 7777776555556777777777777777776544
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=9.8e-16 Score=149.60 Aligned_cols=108 Identities=26% Similarity=0.319 Sum_probs=64.5
Q ss_pred CCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEecc
Q 004195 113 SLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLK 192 (769)
Q Consensus 113 ~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 192 (769)
+|+.|+|++|+++ .+|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 5566666666664 455566666666666666666665555556666666666666666665555556666666666666
Q ss_pred CCCCcccCCccccCCCCCCEEEccCcccc
Q 004195 193 NNSLSGFLPVSLTGLQSLRVVSLSANHLS 221 (769)
Q Consensus 193 ~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 221 (769)
+|.+++..+..|.++++|+.|+|++|.+.
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 66666544445555566666666555554
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=4.4e-16 Score=148.52 Aligned_cols=107 Identities=25% Similarity=0.264 Sum_probs=80.5
Q ss_pred CCcCceeeccCcccC-CcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEE
Q 004195 135 SSSLEILNLSSNYLS-GSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVV 213 (769)
Q Consensus 135 l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 213 (769)
.++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..|..+++|++|+|++|.+++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 367888888888887 77888888888888888888888865 778888888888888888887777777778888888
Q ss_pred EccCccccccC--CCCCCCccCcEEeccCCcC
Q 004195 214 SLSANHLSGEI--PDLRNLKNLRVFDVQDNYF 243 (769)
Q Consensus 214 ~ls~N~l~~~~--p~l~~l~~L~~l~l~~N~l 243 (769)
+|++|++++.. +.+..+++|+.|++++|.+
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l 132 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEV 132 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGG
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcC
Confidence 88888877632 3344444444444444433
No 381
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=1.5e-15 Score=146.15 Aligned_cols=132 Identities=24% Similarity=0.259 Sum_probs=113.0
Q ss_pred CcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccC
Q 004195 114 LKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKN 193 (769)
Q Consensus 114 L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 193 (769)
.+.+++++|+++. +|..+ .++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 3567777788754 55444 36899999999999987777789999999999999999977777889999999999999
Q ss_pred CCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCCCc
Q 004195 194 NSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFP 248 (769)
Q Consensus 194 N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p 248 (769)
|.+++..+..|.++++|++|++++|++++.++. +..+++|+.|++++|.+.+..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999988888889999999999999999977666 5788999999999998887655
No 382
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=2.7e-15 Score=146.51 Aligned_cols=128 Identities=26% Similarity=0.345 Sum_probs=114.1
Q ss_pred cEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCC
Q 004195 115 KVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194 (769)
Q Consensus 115 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 194 (769)
+++++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 35667777774 4666553 58999999999998 78899999999999999999999888899999999999999999
Q ss_pred CCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCCC
Q 004195 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGPR 246 (769)
Q Consensus 195 ~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~ 246 (769)
++++..|..|.++++|++|+|++|+|++..+. +..+++|+.|++++|.+...
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 99999899999999999999999999987775 88999999999999998753
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=6.2e-16 Score=144.28 Aligned_cols=131 Identities=23% Similarity=0.220 Sum_probs=107.2
Q ss_pred CCcCceeeccCcccC-CcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEE
Q 004195 135 SSSLEILNLSSNYLS-GSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVV 213 (769)
Q Consensus 135 l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 213 (769)
.++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+.++++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 478999999999998 78999999999999999999999866 789999999999999999998888888889999999
Q ss_pred EccCccccccC--CCCCCCccCcEEeccCCcCCCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccC
Q 004195 214 SLSANHLSGEI--PDLRNLKNLRVFDVQDNYFGPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISL 286 (769)
Q Consensus 214 ~ls~N~l~~~~--p~l~~l~~L~~l~l~~N~l~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~ 286 (769)
++++|++++.. +.+..+++|+.|++++|.+++..+ .....+..+++|++||+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-------------------~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND-------------------YRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT-------------------HHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH-------------------HHHHHHHHCCCcccccCCC
Confidence 99999998743 557777777777777776642211 0014677888888888764
No 384
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.59 E-value=2.4e-15 Score=160.12 Aligned_cols=235 Identities=12% Similarity=0.161 Sum_probs=149.4
Q ss_pred CCCCcEEEeeccccc--CCCCccccCCCcCceeeccCcccCCcCCccccC--------CCcCCEEEcccCcCCccCCccC
Q 004195 111 LSSLKVLSLVSLGLW--GPLPGSIAHSSSLEILNLSSNYLSGSIPVQISS--------LRNLQTLILDDNKFTGAVPSEL 180 (769)
Q Consensus 111 l~~L~~L~L~~n~l~--g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~--------l~~L~~L~L~~N~l~~~~p~~~ 180 (769)
+++|+.|||++|++. ...+..+ +.++.+++..|.| .+..|.+ |++|+.|+|.+ .++..-+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 678888888888886 2222222 2245555555533 2345556 88888888888 7776667778
Q ss_pred cCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccc---cCC--CCCCCccCc---------------------
Q 004195 181 SLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSG---EIP--DLRNLKNLR--------------------- 234 (769)
Q Consensus 181 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~---~~p--~l~~l~~L~--------------------- 234 (769)
.++++|+.|+|++|.++...+.+|.++.++..+.+..+.... .+. .+..+..|+
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~ 200 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQ 200 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCC
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccC
Confidence 888888888888888877777788887777777665532210 011 122223333
Q ss_pred -----EEeccCCcCCCC---CcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCC-E
Q 004195 235 -----VFDVQDNYFGPR---FPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSIT-Y 305 (769)
Q Consensus 235 -----~l~l~~N~l~~~---~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~ 305 (769)
.+.+.++-.... +.....+|+.++|++|+++ .|++..|..+++|+.|+|.+| +.......|.++++|+ .
T Consensus 201 ~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~ 278 (329)
T 3sb4_A 201 PRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGT 278 (329)
T ss_dssp GGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEE
T ss_pred ccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEE
Confidence 333322211000 0011456777777777776 455667777777888877776 6555556677777777 7
Q ss_pred EEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEE
Q 004195 306 LDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVL 355 (769)
Q Consensus 306 L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~ 355 (769)
+++.+ +++...+..|..+++|+.+++++|+++...+..|..+++|+.++
T Consensus 279 l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 279 LELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 77777 66666667777777788777777777766666777777776654
No 385
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.58 E-value=1.7e-15 Score=145.62 Aligned_cols=133 Identities=21% Similarity=0.231 Sum_probs=109.6
Q ss_pred ccCCCCCCcEEEeecccccCCCCccccCCC-cCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcC
Q 004195 107 TLGSLSSLKVLSLVSLGLWGPLPGSIAHSS-SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQV 185 (769)
Q Consensus 107 ~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 185 (769)
.+.++++|+.|+|++|+++. +|. +..+. +|++|+|++|.|++. ..|+.+++|++|+|++|++++..|..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 46678899999999999975 465 55555 999999999999965 68899999999999999999665566689999
Q ss_pred CCEEeccCCCCcccCCc--cccCCCCCCEEEccCccccccCCC----CCCCccCcEEeccCCcCC
Q 004195 186 LSVLSLKNNSLSGFLPV--SLTGLQSLRVVSLSANHLSGEIPD----LRNLKNLRVFDVQDNYFG 244 (769)
Q Consensus 186 L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~ls~N~l~~~~p~----l~~l~~L~~l~l~~N~l~ 244 (769)
|++|+|++|.++ .+|. .+.++++|+.|++++|.++...+. +..+++|+.||++.|...
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 999999999996 4565 788999999999999999854443 778888888888888653
No 386
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=2.6e-17 Score=161.71 Aligned_cols=108 Identities=23% Similarity=0.334 Sum_probs=59.6
Q ss_pred CCCCCCcEEEeecccccCCCCc------cccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcC
Q 004195 109 GSLSSLKVLSLVSLGLWGPLPG------SIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSL 182 (769)
Q Consensus 109 ~~l~~L~~L~L~~n~l~g~~p~------~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 182 (769)
.....++.++++.+.++|.+|. .|+++++|++|+|++|.+++ +| .+.++++|++|+|++|+++ .+|..+..
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc
Confidence 3445556666666666665554 55556666666666666554 44 5555555666666665555 44555555
Q ss_pred CcCCCEEeccCCCCcccCCccccCCCCCCEEEccCcccc
Q 004195 183 LQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLS 221 (769)
Q Consensus 183 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 221 (769)
+++|++|+|++|++++ +| .+.++++|++|++++|+++
T Consensus 92 ~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~ 128 (198)
T 1ds9_A 92 ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKIT 128 (198)
T ss_dssp HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECC
T ss_pred CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCC
Confidence 5555555555555554 22 3444555555555555544
No 387
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.54 E-value=2.3e-14 Score=136.81 Aligned_cols=108 Identities=24% Similarity=0.272 Sum_probs=75.4
Q ss_pred cEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCC
Q 004195 115 KVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194 (769)
Q Consensus 115 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 194 (769)
+.|++++|+++. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 456666666643 555443 66777777777777766777777777777777777777666666777777777777777
Q ss_pred CCcccCCccccCCCCCCEEEccCccccccCC
Q 004195 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIP 225 (769)
Q Consensus 195 ~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 225 (769)
+|++..+..|.++++|++|+|++|.++...+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 7776666667777777777777777765443
No 388
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=9.2e-15 Score=140.50 Aligned_cols=109 Identities=19% Similarity=0.176 Sum_probs=71.9
Q ss_pred cccCCCcCceeeccCcccCCcCCccccCCC-cCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCC
Q 004195 131 SIAHSSSLEILNLSSNYLSGSIPVQISSLR-NLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQS 209 (769)
Q Consensus 131 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 209 (769)
.+.++.+|++|+|++|+++. +|. +..+. +|++|+|++|.+++. ..|..+++|++|+|++|.+++..|..+.++++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 46677788888888888874 454 44444 788888888888754 56777788888888888877655555577777
Q ss_pred CCEEEccCccccccCC--CCCCCccCcEEeccCCcC
Q 004195 210 LRVVSLSANHLSGEIP--DLRNLKNLRVFDVQDNYF 243 (769)
Q Consensus 210 L~~L~ls~N~l~~~~p--~l~~l~~L~~l~l~~N~l 243 (769)
|++|++++|+++...+ .+..+++|+.|++++|.+
T Consensus 90 L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i 125 (176)
T 1a9n_A 90 LTELILTNNSLVELGDLDPLASLKSLTYLCILRNPV 125 (176)
T ss_dssp CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGG
T ss_pred CCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCC
Confidence 7777777777753222 244444444444444433
No 389
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.53 E-value=1.7e-14 Score=138.19 Aligned_cols=108 Identities=25% Similarity=0.314 Sum_probs=74.8
Q ss_pred cEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCC
Q 004195 115 KVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194 (769)
Q Consensus 115 ~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 194 (769)
+.+++++|++ +.+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l-~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRL-ASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCC-CccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 3456666666 34565553 66777777777777766777777777777777777777655555677777777777777
Q ss_pred CCcccCCccccCCCCCCEEEccCccccccCC
Q 004195 195 SLSGFLPVSLTGLQSLRVVSLSANHLSGEIP 225 (769)
Q Consensus 195 ~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p 225 (769)
+|++..+..|.++++|++|+|++|.+....+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 7776555567777777777777777765443
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=1.3e-16 Score=156.65 Aligned_cols=106 Identities=25% Similarity=0.327 Sum_probs=65.4
Q ss_pred ccCCCcCceeeccCcccCCcCCc------cccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCcccc
Q 004195 132 IAHSSSLEILNLSSNYLSGSIPV------QISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLT 205 (769)
Q Consensus 132 ~~~l~~L~~L~Ls~N~l~g~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 205 (769)
+.....++.++++.|.++|.+|. .|+.+++|++|+|++|++++ +| .+..+++|++|+|++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45566777778888888777765 66667777777777777664 55 6666666666666666666 4555555
Q ss_pred CCCCCCEEEccCccccccCCCCCCCccCcEEeccCC
Q 004195 206 GLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDN 241 (769)
Q Consensus 206 ~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N 241 (769)
.+++|++|++++|++++ +|.+..+++|+.|++++|
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~~~~~l~~L~~L~l~~N 125 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LSGIEKLVNLRVLYMSNN 125 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HHHHHHHHHSSEEEESEE
T ss_pred cCCcCCEEECcCCcCCc-CCccccCCCCCEEECCCC
Confidence 55666666666666654 223333333433333333
No 391
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.51 E-value=2e-16 Score=182.82 Aligned_cols=246 Identities=18% Similarity=0.097 Sum_probs=119.5
Q ss_pred CCCCCcEEEeecccccCCCCcccc-CCCcCceeeccCc-ccCCc-CCccccCCCcCCEEEcccCcCCccCCccC----cC
Q 004195 110 SLSSLKVLSLVSLGLWGPLPGSIA-HSSSLEILNLSSN-YLSGS-IPVQISSLRNLQTLILDDNKFTGAVPSEL----SL 182 (769)
Q Consensus 110 ~l~~L~~L~L~~n~l~g~~p~~~~-~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~----~~ 182 (769)
.+++|+.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 455666666666665554444443 4566666666666 33321 33333456666666666666554333322 24
Q ss_pred CcCCCEEeccCCC--Cccc-CCccccCCCCCCEEEccCc-cccccCCC-CCCCccCcEEeccCCc---------------
Q 004195 183 LQVLSVLSLKNNS--LSGF-LPVSLTGLQSLRVVSLSAN-HLSGEIPD-LRNLKNLRVFDVQDNY--------------- 242 (769)
Q Consensus 183 l~~L~~L~L~~N~--l~~~-~p~~l~~l~~L~~L~ls~N-~l~~~~p~-l~~l~~L~~l~l~~N~--------------- 242 (769)
+++|+.|+|++|. ++.. ++..+.++++|+.|++++| .+.+ ++. +..+++|+.|+++.+.
T Consensus 183 ~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l 261 (594)
T 2p1m_B 183 YTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVAL 261 (594)
T ss_dssp CCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHH
T ss_pred CCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHH
Confidence 4566666666654 1110 1111233466666666655 2222 221 3334444444433221
Q ss_pred ---------------CCCCCccc---ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCcccccc-CCccCCCCCCC
Q 004195 243 ---------------FGPRFPRL---HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGP-FIPSLLSLPSI 303 (769)
Q Consensus 243 ---------------l~~~~p~~---~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L 303 (769)
-.+.++.. .++|+.|+|++|.++....+..+..+++|+.|++++| +... ++.....+++|
T Consensus 262 ~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L 340 (594)
T 2p1m_B 262 SGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDL 340 (594)
T ss_dssp HTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTC
T ss_pred hcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCC
Confidence 01112221 3566677777766543221223456667777777666 3221 11112245666
Q ss_pred CEEEc---------cCCcCCccccccCC-CCCCCcEEEccCCcCCCCCCcccc-ccCCCceEECC
Q 004195 304 TYLDI---------HGNKLTGLLLQNMS-CNPQLAFVDLSSNLLTGYLPSCLQ-VEAKTRLVLYS 357 (769)
Q Consensus 304 ~~L~l---------~~N~l~~~~~~~~~-~l~~L~~l~l~~N~l~g~~p~~~~-~~~~l~~l~l~ 357 (769)
+.|++ +.|.+++.....+. .+++|+.|+++.|.+++..+..+. .+++++.++++
T Consensus 341 ~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~ 405 (594)
T 2p1m_B 341 RELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLC 405 (594)
T ss_dssp CEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred CEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEee
Confidence 66666 23444443222222 256666666666666654443333 35566666665
No 392
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.51 E-value=3.9e-16 Score=180.44 Aligned_cols=63 Identities=8% Similarity=0.037 Sum_probs=30.6
Q ss_pred CCCCCCEEEccCCcCCccccccCCC-CCCCcEEEccCCcCCCCCCccc-cccCCCceEECCCCCCC
Q 004195 299 SLPSITYLDIHGNKLTGLLLQNMSC-NPQLAFVDLSSNLLTGYLPSCL-QVEAKTRLVLYSKNCLS 362 (769)
Q Consensus 299 ~l~~L~~L~l~~N~l~~~~~~~~~~-l~~L~~l~l~~N~l~g~~p~~~-~~~~~l~~l~l~~N~l~ 362 (769)
.+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.+++++|.++
T Consensus 430 ~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 430 HCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp HCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred hCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 444555555544 344333333332 4556666666665544333322 33455666666665553
No 393
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=1.4e-13 Score=131.40 Aligned_cols=109 Identities=28% Similarity=0.302 Sum_probs=97.7
Q ss_pred cCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEcc
Q 004195 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLS 216 (769)
Q Consensus 137 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls 216 (769)
..+.|++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3578999999998 5887774 899999999999998889999999999999999999998888889999999999999
Q ss_pred CccccccCCC-CCCCccCcEEeccCCcCCCCCc
Q 004195 217 ANHLSGEIPD-LRNLKNLRVFDVQDNYFGPRFP 248 (769)
Q Consensus 217 ~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~p 248 (769)
+|+|++.++. +..+++|+.|++++|.+....+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9999988775 8899999999999998876544
No 394
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=2.1e-13 Score=130.49 Aligned_cols=107 Identities=25% Similarity=0.313 Sum_probs=96.1
Q ss_pred CceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccC
Q 004195 138 LEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSA 217 (769)
Q Consensus 138 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~ 217 (769)
-+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 378999999997 6888775 8999999999999998899999999999999999999987777789999999999999
Q ss_pred ccccccCCC-CCCCccCcEEeccCCcCCCCC
Q 004195 218 NHLSGEIPD-LRNLKNLRVFDVQDNYFGPRF 247 (769)
Q Consensus 218 N~l~~~~p~-l~~l~~L~~l~l~~N~l~~~~ 247 (769)
|+|++.++. +..+++|+.|++++|.+....
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 999987776 888999999999999887543
No 395
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.44 E-value=2.2e-13 Score=144.99 Aligned_cols=242 Identities=14% Similarity=0.076 Sum_probs=170.7
Q ss_pred CCCCcEEEeecccccCCCCccccC-CCcCceeeccCcccC--CcCCccccCCCcCCEEEcccCcCCccCCccCcC-----
Q 004195 111 LSSLKVLSLVSLGLWGPLPGSIAH-SSSLEILNLSSNYLS--GSIPVQISSLRNLQTLILDDNKFTGAVPSELSL----- 182 (769)
Q Consensus 111 l~~L~~L~L~~n~l~g~~p~~~~~-l~~L~~L~Ls~N~l~--g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~----- 182 (769)
+.+++.|.++++ +.+.--..+.. +++|++|||++|++. ...+. .++.+..+.+..|. ..+..|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~---~~~~~~~~~~~~~~---I~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAG---TYPNGKFYIYMANF---VPAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSS---SSGGGCCEEECTTE---ECTTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccc---cccccccccccccc---cCHHHhccccccc
Confidence 667888998864 21111122333 788999999999998 32222 23335566666663 23456777
Q ss_pred ---CcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcC-------CCCCcccc
Q 004195 183 ---LQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYF-------GPRFPRLH 251 (769)
Q Consensus 183 ---l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l-------~~~~p~~~ 251 (769)
+++|+.|+|.. .++...+.+|.+|++|+.|+++.|.++...+. +..+.++..+.+..+.. ........
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~ 175 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG 175 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccc
Confidence 99999999999 88877788999999999999999998755443 66676777666655221 10000001
Q ss_pred --------------------------cCCcEEEeCCccccCCcCchhh-cCCCcCcEEeccCccccccCCccCCCCCCCC
Q 004195 252 --------------------------KKMVTLVLRNNRFQFGLNPDEL-RSYNQLQKLDISLNRFVGPFIPSLLSLPSIT 304 (769)
Q Consensus 252 --------------------------~~L~~L~l~~N~~~~~i~p~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 304 (769)
.++..+.+.++-.... ...+ ..+++|+.|+|++|+++......|.++++|+
T Consensus 176 ~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~--~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~ 253 (329)
T 3sb4_A 176 EPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNAD--FKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLL 253 (329)
T ss_dssp CCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHH--HHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCC
T ss_pred cccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHH--HHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCC
Confidence 1223333332211100 1111 2378999999999999987777899999999
Q ss_pred EEEccCCcCCccccccCCCCCCCc-EEEccCCcCCCCCCccccccCCCceEECCCCCCChh
Q 004195 305 YLDIHGNKLTGLLLQNMSCNPQLA-FVDLSSNLLTGYLPSCLQVEAKTRLVLYSKNCLSNE 364 (769)
Q Consensus 305 ~L~l~~N~l~~~~~~~~~~l~~L~-~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 364 (769)
.|+|.+| ++......|..+++|+ .+++.+ +++..-+.+|..+.+|+.++++.|.+...
T Consensus 254 ~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I 312 (329)
T 3sb4_A 254 KIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTL 312 (329)
T ss_dssp EEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEE
T ss_pred EEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCcc
Confidence 9999998 8888888999999999 999998 78877788999999999999988887643
No 396
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.40 E-value=1e-11 Score=135.23 Aligned_cols=222 Identities=14% Similarity=0.079 Sum_probs=113.7
Q ss_pred cccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcC
Q 004195 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQV 185 (769)
Q Consensus 106 ~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 185 (769)
.+|.++ +|+.++|.++ ++..-..+|.+. +|+.++|.+ .++..-+..|.+|++|+.++|++|+++......|. .++
T Consensus 130 ~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~ 204 (401)
T 4fdw_A 130 DAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAG 204 (401)
T ss_dssp TTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCC
T ss_pred hhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecc
Confidence 345553 5777776554 544444556663 577777764 45544556667777777777777766644444555 467
Q ss_pred CCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCC-CCCCccCcEEeccCCcCCC---CCcccccCCcEEEeCC
Q 004195 186 LSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPD-LRNLKNLRVFDVQDNYFGP---RFPRLHKKMVTLVLRN 261 (769)
Q Consensus 186 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~-l~~l~~L~~l~l~~N~l~~---~~p~~~~~L~~L~l~~ 261 (769)
|+.+.|..| ++..-..+|.++++|+.+++..| ++..-.. +.. .+|+.+.+.++ +.. .......+|+.+.+.+
T Consensus 205 L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~~-i~~I~~~aF~~c~~L~~l~l~~ 280 (401)
T 4fdw_A 205 IEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLPNG-VTNIASRAFYYCPELAEVTTYG 280 (401)
T ss_dssp CSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEETT-CCEECTTTTTTCTTCCEEEEES
T ss_pred cCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeCCC-ccEEChhHhhCCCCCCEEEeCC
Confidence 777777643 55555566667777777776654 3222111 333 45555555332 211 1111133445555544
Q ss_pred cccc----CCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcC
Q 004195 262 NRFQ----FGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLL 337 (769)
Q Consensus 262 N~~~----~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l 337 (769)
|.+. ..+.+..|..|++|+.++|.+ .+...-...|.++++|+.++|..| ++..-...|..+ +|+.+++++|.+
T Consensus 281 ~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~ 357 (401)
T 4fdw_A 281 STFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTP 357 (401)
T ss_dssp SCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSC
T ss_pred ccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCC
Confidence 4332 013344455555555555552 243333344555555555555332 444444445555 555555555544
Q ss_pred CC
Q 004195 338 TG 339 (769)
Q Consensus 338 ~g 339 (769)
..
T Consensus 358 ~~ 359 (401)
T 4fdw_A 358 PQ 359 (401)
T ss_dssp CB
T ss_pred cc
Confidence 43
No 397
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=1.4e-12 Score=139.74 Aligned_cols=102 Identities=23% Similarity=0.231 Sum_probs=65.3
Q ss_pred EEeecc-cccCCCCccccCCCcCceeeccC-cccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCC
Q 004195 117 LSLVSL-GLWGPLPGSIAHSSSLEILNLSS-NYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNN 194 (769)
Q Consensus 117 L~L~~n-~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 194 (769)
++++++ ++++ +|. |..+++|++|+|++ |+|++..|..|++|++|++|+|++|+|++..|..|.+|++|++|+|++|
T Consensus 13 v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455555 5543 555 66666677777764 6666655566666777777777777776666666666677777777777
Q ss_pred CCcccCCccccCCCCCCEEEccCcccc
Q 004195 195 SLSGFLPVSLTGLQSLRVVSLSANHLS 221 (769)
Q Consensus 195 ~l~~~~p~~l~~l~~L~~L~ls~N~l~ 221 (769)
+|++..+..|..++ |+.|+|++|.|.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 66655545554444 666666666665
No 398
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.32 E-value=3.7e-11 Score=130.78 Aligned_cols=222 Identities=10% Similarity=0.093 Sum_probs=172.2
Q ss_pred ccccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCc
Q 004195 105 FSTLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQ 184 (769)
Q Consensus 105 ~~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 184 (769)
..+|.++ +|+.++|.+ .+...-+.+|.++++|+.++|+.|+++......|. +.+|+.+.|..| ++..-...|.+++
T Consensus 151 ~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~ 226 (401)
T 4fdw_A 151 DMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTS 226 (401)
T ss_dssp TTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCT
T ss_pred HHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCC
Confidence 4466664 799999985 67666678899999999999999999954445555 799999999855 7767778899999
Q ss_pred CCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCC-CCCCCccCcEEeccCCcCCC----CCc----ccccCCc
Q 004195 185 VLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP-DLRNLKNLRVFDVQDNYFGP----RFP----RLHKKMV 255 (769)
Q Consensus 185 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p-~l~~l~~L~~l~l~~N~l~~----~~p----~~~~~L~ 255 (769)
+|+.++|..| ++..-..+|.+ .+|+.+.+. |.++.... .+..+++|+.+++.+|.+.. .++ ..+.+|+
T Consensus 227 ~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~ 303 (401)
T 4fdw_A 227 QLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLA 303 (401)
T ss_dssp TCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCC
T ss_pred CCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCC
Confidence 9999999976 66566678887 789999994 55654333 38899999999999887651 122 2356899
Q ss_pred EEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCC-CCcEEEccC
Q 004195 256 TLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNP-QLAFVDLSS 334 (769)
Q Consensus 256 ~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~l~l~~ 334 (769)
.+.|.++ ++ .+....|..+++|+.++|..| ++..-...|.++ +|+.+++++|.+.......|..++ .+..|.+..
T Consensus 304 ~l~l~~~-i~-~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~ 379 (401)
T 4fdw_A 304 RFEIPES-IR-ILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPA 379 (401)
T ss_dssp EECCCTT-CC-EECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECG
T ss_pred eEEeCCc-eE-EEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCH
Confidence 9999854 55 466788999999999999665 666567789999 999999999988877777777664 566776655
Q ss_pred CcC
Q 004195 335 NLL 337 (769)
Q Consensus 335 N~l 337 (769)
|.+
T Consensus 380 ~~~ 382 (401)
T 4fdw_A 380 ESV 382 (401)
T ss_dssp GGH
T ss_pred HHH
Confidence 543
No 399
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.30 E-value=5.7e-12 Score=135.01 Aligned_cols=105 Identities=18% Similarity=0.120 Sum_probs=92.1
Q ss_pred ceeeccCc-ccCCcCCccccCCCcCCEEEccc-CcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEcc
Q 004195 139 EILNLSSN-YLSGSIPVQISSLRNLQTLILDD-NKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLS 216 (769)
Q Consensus 139 ~~L~Ls~N-~l~g~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls 216 (769)
..++++++ +|+ .+|. |..+++|++|+|++ |+|++..|..|++|++|++|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35689998 898 4888 99999999999996 99998888999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCccCcEEeccCCcCCC
Q 004195 217 ANHLSGEIPDLRNLKNLRVFDVQDNYFGP 245 (769)
Q Consensus 217 ~N~l~~~~p~l~~l~~L~~l~l~~N~l~~ 245 (769)
+|+|++.++.......|+.|++.+|.|..
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccC
Confidence 99999877764443348888888887764
No 400
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.27 E-value=1.1e-11 Score=127.09 Aligned_cols=147 Identities=8% Similarity=-0.052 Sum_probs=112.8
Q ss_pred HHHHhcCCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCC
Q 004195 475 LKEATDCFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDP 553 (769)
Q Consensus 475 l~~~t~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~ 553 (769)
+....++|.....++.|+.+.||++... |+.+++|+...........+.+|+++++.++ |..+.++++++.+.
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~----- 82 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHD----- 82 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEET-----
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecC-----
Confidence 4455567877888888889999999864 6789999987543234457999999999985 67788899887653
Q ss_pred CcceEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccC------------------------------
Q 004195 554 SISIIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTG------------------------------ 603 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------------------------------ 603 (769)
+..|+||||++|.+|.+.+.. ......++.+++++|+.||+.
T Consensus 83 --~~~~lv~e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (263)
T 3tm0_A 83 --GWSNLLMSEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVD 154 (263)
T ss_dssp --TEEEEEEECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCS
T ss_pred --CceEEEEEecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccc
Confidence 237999999999999876421 122346788999999999981
Q ss_pred --------------------------CCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 604 --------------------------IVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 604 --------------------------~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 155 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 155 CENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01358999999999999876667899998753
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.22 E-value=8.4e-14 Score=150.19 Aligned_cols=110 Identities=25% Similarity=0.207 Sum_probs=56.6
Q ss_pred CCCcEEEeecccccCCCCccccC-----CCcCceeeccCcccCCcCCccc-cCCCcCCEEEcccCcCCccCCccC-----
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAH-----SSSLEILNLSSNYLSGSIPVQI-SSLRNLQTLILDDNKFTGAVPSEL----- 180 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~-----l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~----- 180 (769)
++|+.|+|++|.++......+.. ..+|++|||++|.++..-...+ ..+++|+.|+|++|.++..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 45667777777665432222222 2566666666666653322222 234556666666666653322222
Q ss_pred cCCcCCCEEeccCCCCcc----cCCccccCCCCCCEEEccCcccc
Q 004195 181 SLLQVLSVLSLKNNSLSG----FLPVSLTGLQSLRVVSLSANHLS 221 (769)
Q Consensus 181 ~~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~ls~N~l~ 221 (769)
...++|++|+|++|.++. .++..+..+++|++|+|++|.|+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLG 196 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCC
Confidence 234556666666666543 12333345555556666555554
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.19 E-value=1.6e-13 Score=148.03 Aligned_cols=86 Identities=23% Similarity=0.193 Sum_probs=48.9
Q ss_pred CcCceeeccCcccCCcCCccccCC-----CcCCEEEcccCcCCccCCccC-cCCcCCCEEeccCCCCcccCCccc-----
Q 004195 136 SSLEILNLSSNYLSGSIPVQISSL-----RNLQTLILDDNKFTGAVPSEL-SLLQVLSVLSLKNNSLSGFLPVSL----- 204 (769)
Q Consensus 136 ~~L~~L~Ls~N~l~g~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~l----- 204 (769)
++|+.|+|++|.|+......|..+ ++|++|+|++|.++..-...+ ..+++|+.|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 467777777777765433333322 577777777777654322222 235566777777776654333333
Q ss_pred cCCCCCCEEEccCcccc
Q 004195 205 TGLQSLRVVSLSANHLS 221 (769)
Q Consensus 205 ~~l~~L~~L~ls~N~l~ 221 (769)
...++|+.|+|++|.|+
T Consensus 152 ~~~~~L~~L~Ls~n~l~ 168 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLT 168 (372)
T ss_dssp STTCCCCEEECCSSCCH
T ss_pred hcCCccceeeCCCCCCC
Confidence 23455666666666654
No 403
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.18 E-value=5.7e-11 Score=121.51 Aligned_cols=135 Identities=10% Similarity=0.070 Sum_probs=97.4
Q ss_pred CCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCc--eeeEeeeeeccCCCCCCcceEE
Q 004195 482 FDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSN--LVSALGHCLDFSLDDPSISIIY 559 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~n--Iv~l~~~~~~~~~~~~~~~~~~ 559 (769)
+....+.+.|..+.||++...+|+.+++|..... ....+.+|+++++.+++.+ +.+++++..+.+ ..+
T Consensus 22 ~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~-------~~~ 91 (264)
T 1nd4_A 22 YDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAG-------RDW 91 (264)
T ss_dssp CEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS-------CEE
T ss_pred CceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCC-------CCE
Confidence 3333333455669999998777888999997643 2356889999999997555 455787765432 379
Q ss_pred EEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCC-----------------------------------
Q 004195 560 LIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI----------------------------------- 604 (769)
Q Consensus 560 lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------- 604 (769)
+||||++|.++. ... .+ ...++.++++.|+.||+..
T Consensus 92 ~v~e~i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
T 1nd4_A 92 LLLGEVPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH 162 (264)
T ss_dssp EEEECCSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred EEEEecCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence 999999998884 221 12 2356777888888888641
Q ss_pred --------------------CCCccccCccccceeeCCCceeeecCCCCch
Q 004195 605 --------------------VPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 605 --------------------~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
.+.++|+|++|.||+++++..++|+|||.+.
T Consensus 163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999887777899999763
No 404
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.97 E-value=1e-09 Score=117.95 Aligned_cols=145 Identities=14% Similarity=0.187 Sum_probs=106.9
Q ss_pred CcCccccCCceeEEEEEeCCCcEEEEEEcc--ccC-CCChhHHHHHHHHHhhcc--CCceeeEeeeeeccCCCCCCcceE
Q 004195 484 SSSFMCDASHGQIYKGKLTDGTLVAIRSLK--MSK-KSSPHMYTYHIELISKLR--HSNLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 484 ~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~--~~~-~~~~~~~~~Ei~~l~~l~--H~nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
..+.++.|.++.||+....+ ..+++|+.. ... ......+.+|+.+++.++ +..+.++++++.+... .+..
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~----~g~~ 116 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESV----IGRA 116 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTT----TSSC
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCc----cCCe
Confidence 35678999999999998764 578888876 332 123457889999999997 4567888888865422 1336
Q ss_pred EEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCC----------------------------------
Q 004195 559 YLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI---------------------------------- 604 (769)
Q Consensus 559 ~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------------- 604 (769)
++||||++|..+.+... ..++..++..++.++++.|+.||+..
T Consensus 117 ~~vme~v~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (359)
T 3dxp_A 117 FYIMEFVSGRVLWDQSL---PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES 193 (359)
T ss_dssp EEEEECCCCBCCCCTTC---TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred EEEEEecCCeecCCCcc---ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence 89999999988754221 24678888999999999999999721
Q ss_pred ---------------------CCCccccCccccceeeCCCce--eeecCCCCchh
Q 004195 605 ---------------------VPGVFSNNLKITDVLLDENFH--VKINSYNLPLL 636 (769)
Q Consensus 605 ---------------------~~~ivHrDlKp~NILld~~~~--~kl~DFGla~~ 636 (769)
.+.++|+|++|.||+++.++. +.|.||+.+..
T Consensus 194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246999999999999987753 68999998754
No 405
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.83 E-value=6.2e-08 Score=105.37 Aligned_cols=216 Identities=11% Similarity=0.027 Sum_probs=88.9
Q ss_pred ccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCC
Q 004195 130 GSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQS 209 (769)
Q Consensus 130 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 209 (769)
.+|.++++|+.+.+.++..+ .-...|.++.+|+.+++..| ++..-...|.++..|+.+.+..+... +.......++
T Consensus 156 ~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~ 231 (394)
T 4fs7_A 156 EAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTG 231 (394)
T ss_dssp TTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCC
T ss_pred hhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCC
Confidence 45566666666666544322 33445556666666666554 33333445555555655555544322 1222223344
Q ss_pred CCEEEccCccccccCCCCCCCccCcEEeccCCcCC--CCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCc
Q 004195 210 LRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFG--PRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLN 287 (769)
Q Consensus 210 L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~--~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N 287 (769)
|+.+.+..+.-.-.-..+..+..|+.+.+..+... .........+..+.+..+.+ ....+..+.+|+.+.+..+
T Consensus 232 l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i----~~~~F~~~~~L~~i~l~~~ 307 (394)
T 4fs7_A 232 VKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV----PEKTFYGCSSLTEVKLLDS 307 (394)
T ss_dssp CCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE----CTTTTTTCTTCCEEEECTT
T ss_pred CceEEECCCceecccccccccccceeEEcCCCcceeeccccccccccceeccCceee----ccccccccccccccccccc
Confidence 44444432211000011334444444444333211 00111122333333332221 1223444444444444432
Q ss_pred cccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEEC
Q 004195 288 RFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLY 356 (769)
Q Consensus 288 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l 356 (769)
+...-...|.++.+|+.++|.++ ++..-...|.++.+|+.+++..| ++-.-..+|..+.+|+.+.+
T Consensus 308 -i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~l 373 (394)
T 4fs7_A 308 -VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVEL 373 (394)
T ss_dssp -CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEE
T ss_pred -cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEE
Confidence 22222333444444555444322 33333344444445555544433 33233334444444444444
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.83 E-value=7.4e-10 Score=118.30 Aligned_cols=61 Identities=13% Similarity=0.145 Sum_probs=30.8
Q ss_pred CccccCCCcCCEEEcccCcCCccCCccCcCCcCCCEEeccCCCCcccCCcccc--CCCCCCEEEcc
Q 004195 153 PVQISSLRNLQTLILDDNKFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLT--GLQSLRVVSLS 216 (769)
Q Consensus 153 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~ls 216 (769)
+..+..+++|+.|+|++|.-. .+|. +. +++|+.|+|..|.++......+. .+++|+.|+|+
T Consensus 165 ~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 165 SPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp HHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEE
T ss_pred HHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEe
Confidence 344455566666666655211 2222 22 56666666666655432222332 56666666664
No 407
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.80 E-value=1.5e-09 Score=113.85 Aligned_cols=189 Identities=11% Similarity=0.078 Sum_probs=118.7
Q ss_pred cCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCc--eeeEeeeeeccCCCCCCcceEEEE
Q 004195 485 SSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSN--LVSALGHCLDFSLDDPSISIIYLI 561 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~n--Iv~l~~~~~~~~~~~~~~~~~~lV 561 (769)
.+.++.|....||+.. ..+++|+.... .....+.+|.++++.+. +.. +.+++.+..... .....|+|
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~----~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSE----TYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCS----SCSCSCEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC----CCCcceEE
Confidence 4668999999999874 46888886532 22467899999998884 332 334444432211 11234889
Q ss_pred EeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccC--------------------------------------
Q 004195 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTG-------------------------------------- 603 (769)
Q Consensus 562 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------------------------------------- 603 (769)
|||++|.++.+... ..++..++..++.++++.|+.||+.
T Consensus 95 m~~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 95 FTKIKGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp EECCCCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred EcccCCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 99999988875332 1356667777788888888777751
Q ss_pred -----------------CCCCccccCccccceeeCC--CceeeecCCCCchhhhccCCcceeecC-CCcchhh----hcc
Q 004195 604 -----------------IVPGVFSNNLKITDVLLDE--NFHVKINSYNLPLLAEARGKGSAEVSS-PAKKTSV----LAR 659 (769)
Q Consensus 604 -----------------~~~~ivHrDlKp~NILld~--~~~~kl~DFGla~~~~~~~~~~~~~~~-~~~~pe~----~~~ 659 (769)
..+.++|+|++|.||++++ ...+.|+||+.+........-...... ....++. +..
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~ 251 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNH 251 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHH
Confidence 1245899999999999988 566889999987543211000000000 0011110 000
Q ss_pred -CCC---------CCCCCeeehhHHHHHHHhCCCCCC
Q 004195 660 -TEQ---------DDKSDVYDIGIILIEIIVGRPITS 686 (769)
Q Consensus 660 -~~~---------~~ksDVwS~Gvil~elltG~~p~~ 686 (769)
+.. ....+.|++|.++|++.+|.+++.
T Consensus 252 Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 252 YKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 000 112578999999999999987764
No 408
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.78 E-value=9.2e-08 Score=104.01 Aligned_cols=102 Identities=9% Similarity=0.079 Sum_probs=78.9
Q ss_pred ccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEEccCCcCCccccccCCCCCCCcEE
Q 004195 251 HKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLDIHGNKLTGLLLQNMSCNPQLAFV 330 (769)
Q Consensus 251 ~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l 330 (769)
...+..+.+..+... +....+..+..++.+.+..+.+. ...|..+.+|+.+.+..+ ++..-...|..+.+|+.+
T Consensus 252 ~~~l~~~~~~~~~~~--i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i 325 (394)
T 4fs7_A 252 CTDLESISIQNNKLR--IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSI 325 (394)
T ss_dssp CSSCCEEEECCTTCE--ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEE
T ss_pred cccceeEEcCCCcce--eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEE
Confidence 356777788776543 44677888999999988776542 346788999999999765 666667789999999999
Q ss_pred EccCCcCCCCCCccccccCCCceEECCCC
Q 004195 331 DLSSNLLTGYLPSCLQVEAKTRLVLYSKN 359 (769)
Q Consensus 331 ~l~~N~l~g~~p~~~~~~~~l~~l~l~~N 359 (769)
+|.++ ++-.-..+|..+.+|+.+.+..|
T Consensus 326 ~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 326 DLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp CCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred EeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 99754 66555678888999999988765
No 409
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.78 E-value=7.9e-11 Score=119.39 Aligned_cols=104 Identities=20% Similarity=0.271 Sum_probs=68.4
Q ss_pred ccCCCcCce--eeccCcccC---CcCCccccCCCcCCEEEcccCcCCc--cCCccCcCCcCCCEEeccCCCCcccCCccc
Q 004195 132 IAHSSSLEI--LNLSSNYLS---GSIPVQISSLRNLQTLILDDNKFTG--AVPSELSLLQVLSVLSLKNNSLSGFLPVSL 204 (769)
Q Consensus 132 ~~~l~~L~~--L~Ls~N~l~---g~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 204 (769)
|...+.|.. ++++.|+.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 445555655 667777432 2222233567788888888888876 4556677788888888888888765 334
Q ss_pred cCCC--CCCEEEccCccccccCCC--------CCCCccCcEEe
Q 004195 205 TGLQ--SLRVVSLSANHLSGEIPD--------LRNLKNLRVFD 237 (769)
Q Consensus 205 ~~l~--~L~~L~ls~N~l~~~~p~--------l~~l~~L~~l~ 237 (769)
..+. +|+.|+|++|.+++.+|. +..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4444 788888888888876663 44566666654
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.75 E-value=1.3e-09 Score=116.35 Aligned_cols=113 Identities=13% Similarity=0.061 Sum_probs=72.8
Q ss_pred cccCCCCCCcEEEeecccc---------cCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccC
Q 004195 106 STLGSLSSLKVLSLVSLGL---------WGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAV 176 (769)
Q Consensus 106 ~~~~~l~~L~~L~L~~n~l---------~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~ 176 (769)
.++..+++|+.|.+.++.. .+.++..+..+++|+.|+|++|.-. .+|. +. +++|+.|+|..|.++...
T Consensus 133 ~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~ 209 (362)
T 2ra8_A 133 ENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSV 209 (362)
T ss_dssp TTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHH
T ss_pred HhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHH
Confidence 3456788999999976543 1235566788899999999988411 2343 43 899999999998876443
Q ss_pred CccCc--CCcCCCEEeccC--CCCccc-----CCccc--cCCCCCCEEEccCcccc
Q 004195 177 PSELS--LLQVLSVLSLKN--NSLSGF-----LPVSL--TGLQSLRVVSLSANHLS 221 (769)
Q Consensus 177 p~~~~--~l~~L~~L~L~~--N~l~~~-----~p~~l--~~l~~L~~L~ls~N~l~ 221 (769)
...+. .+++|+.|+|+. |...+. +...+ ..+++|++|+|++|.+.
T Consensus 210 l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~ 265 (362)
T 2ra8_A 210 VEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQ 265 (362)
T ss_dssp HHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTH
T ss_pred HHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCc
Confidence 33444 789999999863 222111 01112 23566666666666654
No 411
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.64 E-value=2.4e-06 Score=92.73 Aligned_cols=246 Identities=13% Similarity=0.146 Sum_probs=134.7
Q ss_pred ccccCCCCCCcEEEeeccc---ccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCc
Q 004195 105 FSTLGSLSSLKVLSLVSLG---LWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELS 181 (769)
Q Consensus 105 ~~~~~~l~~L~~L~L~~n~---l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 181 (769)
..+|.++++|+.+.+..|. ++..-..+|.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|.
T Consensus 80 ~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~ 157 (394)
T 4gt6_A 80 SNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFS 157 (394)
T ss_dssp TTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTT
T ss_pred HHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeeccccee
Confidence 3467777788887776653 43333456777777777776654 34344556777777777777654 3334455677
Q ss_pred CCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCC----------------
Q 004195 182 LLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGP---------------- 245 (769)
Q Consensus 182 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~---------------- 245 (769)
.+.+|+.+.+..+ ++..-..+|.+ .+|+.+.+..+-..-....+..+.+|.......+....
T Consensus 158 ~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (394)
T 4gt6_A 158 YCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTRIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYAL 235 (394)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCEECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEE
T ss_pred cccccccccccce-eeEeccccccc-cceeEEEECCcccccccchhhhccccceecccccccccccceeecccccccccc
Confidence 7777777777654 33333344433 45666666543322111224444444444333221110
Q ss_pred ------------CCcc-----------cccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCC
Q 004195 246 ------------RFPR-----------LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPS 302 (769)
Q Consensus 246 ------------~~p~-----------~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 302 (769)
.+|. ....|..+.+..+... +....|.+++.|+.+.+.. .+.......|.++.+
T Consensus 236 ~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~--I~~~aF~~c~~L~~i~l~~-~i~~I~~~aF~~c~~ 312 (394)
T 4gt6_A 236 IRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS--IGTGAFMNCPALQDIEFSS-RITELPESVFAGCIS 312 (394)
T ss_dssp EECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE--ECTTTTTTCTTCCEEECCT-TCCEECTTTTTTCTT
T ss_pred cccccccccceEEcCCcceEcccceeeecccccEEecccccce--ecCcccccccccccccCCC-cccccCceeecCCCC
Confidence 0111 0133445555443322 3344566666666666642 344333445666777
Q ss_pred CCEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCC
Q 004195 303 ITYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKN 359 (769)
Q Consensus 303 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N 359 (769)
|+.++|..+ ++..-...|..+.+|+.+.|..+ ++-.-..+|..+.+|+.+.+.+|
T Consensus 313 L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 313 LKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp CCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSC
T ss_pred cCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCc
Confidence 777777643 55444556667777777777543 44344456666677777766654
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.57 E-value=4.2e-09 Score=106.67 Aligned_cols=106 Identities=25% Similarity=0.172 Sum_probs=76.9
Q ss_pred cCCCCCCcE--EEeecccc---cCCCCccccCCCcCceeeccCcccCC--cCCccccCCCcCCEEEcccCcCCccCCccC
Q 004195 108 LGSLSSLKV--LSLVSLGL---WGPLPGSIAHSSSLEILNLSSNYLSG--SIPVQISSLRNLQTLILDDNKFTGAVPSEL 180 (769)
Q Consensus 108 ~~~l~~L~~--L~L~~n~l---~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 180 (769)
|...+.|+. ++++.|.. .+.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 333444444 55666632 22223333578899999999999998 5567788999999999999999865 445
Q ss_pred cCCc--CCCEEeccCCCCcccCCc-------cccCCCCCCEEEc
Q 004195 181 SLLQ--VLSVLSLKNNSLSGFLPV-------SLTGLQSLRVVSL 215 (769)
Q Consensus 181 ~~l~--~L~~L~L~~N~l~~~~p~-------~l~~l~~L~~L~l 215 (769)
..+. +|++|+|++|.+++.+|. .+..+++|+.||-
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LDg 258 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDG 258 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEESS
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeECC
Confidence 5555 899999999999987763 3678889988863
No 413
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.55 E-value=5e-07 Score=93.37 Aligned_cols=76 Identities=14% Similarity=0.135 Sum_probs=61.2
Q ss_pred CcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCC---ceeeEeeeeeccCCCCCCcceEEE
Q 004195 484 SSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHS---NLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 484 ~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~---nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
..+.|+.|.++.||+++..+|+.++||+...........+.+|++.|+.+++. .+.+++++.. .++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~~-----------~~l 87 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWDD-----------RTL 87 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEET-----------TEE
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEecC-----------cEE
Confidence 45779999999999999888999999997644333456799999999999875 5778877631 389
Q ss_pred EEeccCCCch
Q 004195 561 IFEYAPNETL 570 (769)
Q Consensus 561 V~Ey~~~gsL 570 (769)
||||++++++
T Consensus 88 vme~l~g~~~ 97 (288)
T 3d1u_A 88 AMEWVDERPP 97 (288)
T ss_dssp EEECCCCCCC
T ss_pred EEEecccCCC
Confidence 9999998864
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.45 E-value=1.9e-08 Score=96.84 Aligned_cols=116 Identities=10% Similarity=0.122 Sum_probs=77.8
Q ss_pred cccCCCCCCcEEEeecc-cccC----CCCccccCCCcCceeeccCcccCCc----CCccccCCCcCCEEEcccCcCCcc-
Q 004195 106 STLGSLSSLKVLSLVSL-GLWG----PLPGSIAHSSSLEILNLSSNYLSGS----IPVQISSLRNLQTLILDDNKFTGA- 175 (769)
Q Consensus 106 ~~~~~l~~L~~L~L~~n-~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~~~- 175 (769)
..+...+.|+.|+|++| .+.. .+...+...++|++|+|++|.|... +...+...++|++|+|++|.|+..
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 35566788888888888 7753 2345566778888888888887632 334455567788888888887643
Q ss_pred ---CCccCcCCcCCCEEec--cCCCCccc----CCccccCCCCCCEEEccCcccc
Q 004195 176 ---VPSELSLLQVLSVLSL--KNNSLSGF----LPVSLTGLQSLRVVSLSANHLS 221 (769)
Q Consensus 176 ---~p~~~~~l~~L~~L~L--~~N~l~~~----~p~~l~~l~~L~~L~ls~N~l~ 221 (769)
+...+...++|++|+| ++|.++.. +...+...++|++|+|++|.+.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4455666677888888 67777643 2334445567777777777664
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.45 E-value=6.3e-07 Score=94.38 Aligned_cols=136 Identities=13% Similarity=0.112 Sum_probs=97.0
Q ss_pred CCCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccC----CceeeEeeeeeccCCCCCCcc
Q 004195 481 CFDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH----SNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 481 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H----~nIv~l~~~~~~~~~~~~~~~ 556 (769)
.....+.++.|....||+. |..+++|+.... .....+.+|.++++.+.+ -.+.+++++ ..
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---~~------- 101 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ---SD------- 101 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---CS-------
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec---CC-------
Confidence 4556778999999999998 667888876432 113468899999988866 123444444 11
Q ss_pred eEEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCC--------------------------------
Q 004195 557 IIYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGI-------------------------------- 604 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------- 604 (769)
.++||||++|.++.+.... .++..++..++.++++.|+.||+..
T Consensus 102 -~~lvme~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (320)
T 3r70_A 102 -RFNIMKYIKGERITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEK 177 (320)
T ss_dssp -SCEEEECCCCBCCCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHH
T ss_pred -cEEEEeecCCccccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhh
Confidence 4899999999888643321 3455666677777777777777432
Q ss_pred ----------------------------CCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 605 ----------------------------VPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 605 ----------------------------~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
.+.++|+|++|.||+++++..+.|.||+.+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 178 EQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp TTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred cccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 12459999999999999876679999998744
No 416
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.28 E-value=6.2e-05 Score=81.47 Aligned_cols=246 Identities=9% Similarity=0.064 Sum_probs=159.2
Q ss_pred cccCCC-CCCcEEEeecccccCCCCccccCCCcCceeeccCcc---cCCcCCccccCCCcCCEEEcccCcCCccCCccCc
Q 004195 106 STLGSL-SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNY---LSGSIPVQISSLRNLQTLILDDNKFTGAVPSELS 181 (769)
Q Consensus 106 ~~~~~l-~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~---l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 181 (769)
.+|.++ ..|+.+.+.++ ++..-..+|.++++|+.+.++.|. ++..-...|.++.+|+.+.+..+ ++..-...|.
T Consensus 57 ~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~ 134 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFH 134 (394)
T ss_dssp TTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTT
T ss_pred hhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhh
Confidence 467777 46999999753 665566889999999999998875 65444678899999999988765 5545567899
Q ss_pred CCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCC--CCCcccccCCcEEEe
Q 004195 182 LLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFG--PRFPRLHKKMVTLVL 259 (769)
Q Consensus 182 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~--~~~p~~~~~L~~L~l 259 (769)
.+.+|+.+.+..+ +.......|.++.+|+.+.+..+ ++..-........|+.+.+..+... .........+.....
T Consensus 135 ~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~ 212 (394)
T 4gt6_A 135 HCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTGTALTQIHIPAKVTRIGTNAFSECFALSTITS 212 (394)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCCCSEEEECTTCCEECTTTTTTCTTCCEEEE
T ss_pred hhcccccccccce-eeeecccceecccccccccccce-eeEeccccccccceeEEEECCcccccccchhhhccccceecc
Confidence 9999999999765 44456678899999999999765 3322222223356777776543211 000000111221111
Q ss_pred CCc------------------------------------cccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCC
Q 004195 260 RNN------------------------------------RFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSI 303 (769)
Q Consensus 260 ~~N------------------------------------~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 303 (769)
..+ .+. .+....|..+..|+.+.+..+.. ..-...|.++++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~-~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L 290 (394)
T 4gt6_A 213 DSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVA-RIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPAL 290 (394)
T ss_dssp CCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEE-EECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTC
T ss_pred cccccccccceeecccccccccccccccccccceEEcCCcce-EcccceeeecccccEEecccccc-eecCccccccccc
Confidence 111 011 12234567777888888765533 2234567778888
Q ss_pred CEEEccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCC
Q 004195 304 TYLDIHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKN 359 (769)
Q Consensus 304 ~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N 359 (769)
+.+.+. +.++......|..+.+|+.++|..| ++-.-..+|..+.+|+.+.+..+
T Consensus 291 ~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s 344 (394)
T 4gt6_A 291 QDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS 344 (394)
T ss_dssp CEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT
T ss_pred ccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc
Confidence 888885 4566666677888888888888754 55444566777777777776443
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.28 E-value=7.3e-08 Score=92.74 Aligned_cols=115 Identities=16% Similarity=0.158 Sum_probs=74.2
Q ss_pred CccccCCCcCceeeccCc-ccCCc----CCccccCCCcCCEEEcccCcCCcc----CCccCcCCcCCCEEeccCCCCccc
Q 004195 129 PGSIAHSSSLEILNLSSN-YLSGS----IPVQISSLRNLQTLILDDNKFTGA----VPSELSLLQVLSVLSLKNNSLSGF 199 (769)
Q Consensus 129 p~~~~~l~~L~~L~Ls~N-~l~g~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~ 199 (769)
...+...++|++|+|++| .|... +...+...++|++|+|++|.|... +...+...++|++|+|++|.++..
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 345677888889999888 77632 344566678888888888887632 334455567788888888887643
Q ss_pred ----CCccccCCCCCCEEEc--cCccccccCC-----CCCCCccCcEEeccCCcC
Q 004195 200 ----LPVSLTGLQSLRVVSL--SANHLSGEIP-----DLRNLKNLRVFDVQDNYF 243 (769)
Q Consensus 200 ----~p~~l~~l~~L~~L~l--s~N~l~~~~p-----~l~~l~~L~~l~l~~N~l 243 (769)
+...+...++|++|+| ++|.++..-. .+...++|+.|++++|.+
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 3455666677777777 6677654211 133345566666555544
No 418
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.23 E-value=4.9e-06 Score=86.87 Aligned_cols=137 Identities=10% Similarity=-0.025 Sum_probs=90.3
Q ss_pred cCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCC---ceeeEeeeeeccCCCCCCcceEEEE
Q 004195 485 SSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHS---NLVSALGHCLDFSLDDPSISIIYLI 561 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~---nIv~l~~~~~~~~~~~~~~~~~~lV 561 (769)
.+.++.|....||+. |..+++|+... ......+.+|.++++.+++. .+.+++.++... .+..++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~------~g~~~~v 91 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRS------DGNPFVG 91 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECT------TSCEEEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccC------CCceEEE
Confidence 456788888999988 56788888532 12245788999999999753 245666665421 1236899
Q ss_pred EeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccC--------------------------------------
Q 004195 562 FEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTG-------------------------------------- 603 (769)
Q Consensus 562 ~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------------------------------------- 603 (769)
|||++|.++.+.... .++..++..++.++++.|+.||+.
T Consensus 92 ~e~i~G~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 92 YRKVQGQILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp EECCCSEECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred EeccCCeECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 999999888653211 133344444444444444444432
Q ss_pred -------------------CCCCccccCccccceeeCC---Cce-eeecCCCCchh
Q 004195 604 -------------------IVPGVFSNNLKITDVLLDE---NFH-VKINSYNLPLL 636 (769)
Q Consensus 604 -------------------~~~~ivHrDlKp~NILld~---~~~-~kl~DFGla~~ 636 (769)
..+.++|+|++|.||++++ ++. +.|.||+.+..
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2235799999999999987 355 58999997643
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.22 E-value=3.3e-06 Score=86.39 Aligned_cols=134 Identities=13% Similarity=-0.022 Sum_probs=89.9
Q ss_pred ccccCCce-eEEEEEeC-CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcceEEEEEe
Q 004195 487 FMCDASHG-QIYKGKLT-DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSISIIYLIFE 563 (769)
Q Consensus 487 ~iG~G~~g-~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~~~lV~E 563 (769)
.+..|..| .||+.... ++..+++|+-... ...++.+|...|+.+. +--+.++++++.+.+ ..++|||
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~-------~~~lvme 100 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD-------DAWLLTT 100 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT-------EEEEEEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC-------eEEEEEE
Confidence 44556555 69998865 5678899986532 3457889999998884 323567777776533 3799999
Q ss_pred ccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccC----------------------------------------
Q 004195 564 YAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTG---------------------------------------- 603 (769)
Q Consensus 564 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~---------------------------------------- 603 (769)
++++.++.+..... ......++.++++.|+-||+.
T Consensus 101 ~l~G~~~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (272)
T 4gkh_A 101 AIPGKTAFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWP 175 (272)
T ss_dssp CCCSEEHHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCC
T ss_pred eeCCccccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchH
Confidence 99998876654311 112223444455555555431
Q ss_pred ---------------CCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 604 ---------------IVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 604 ---------------~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
..+.++|+|+.+.||++++++.+-|.||+.+.
T Consensus 176 ~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 176 VEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 11237899999999999988777899998764
No 420
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.20 E-value=2.3e-06 Score=91.57 Aligned_cols=83 Identities=6% Similarity=-0.053 Sum_probs=56.7
Q ss_pred Ccc-ccCCceeEEEEEeC-------CCcEEEEEEccccC---CCChhHHHHHHHHHhhcc-C--CceeeEeeeeeccCCC
Q 004195 486 SFM-CDASHGQIYKGKLT-------DGTLVAIRSLKMSK---KSSPHMYTYHIELISKLR-H--SNLVSALGHCLDFSLD 551 (769)
Q Consensus 486 ~~i-G~G~~g~Vy~~~~~-------~g~~vAvK~~~~~~---~~~~~~~~~Ei~~l~~l~-H--~nIv~l~~~~~~~~~~ 551 (769)
+.| +.|....+|+.... +++.+++|+..... ......+.+|+.+++.++ + -.+.++++++.+...
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~- 104 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV- 104 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT-
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc-
Confidence 566 78888999998764 26688899875432 112356888999998885 3 346678877654321
Q ss_pred CCCcceEEEEEeccCCCchhh
Q 004195 552 DPSISIIYLIFEYAPNETLRS 572 (769)
Q Consensus 552 ~~~~~~~~lV~Ey~~~gsL~~ 572 (769)
.+..++||||++|..+.+
T Consensus 105 ---~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 ---LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp ---TSSCEEEEECCCCBCCCB
T ss_pred ---cCCceEEEEecCCCChhh
Confidence 123589999999876653
No 421
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.19 E-value=8.8e-05 Score=79.77 Aligned_cols=240 Identities=11% Similarity=0.034 Sum_probs=121.4
Q ss_pred cccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcC
Q 004195 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQV 185 (769)
Q Consensus 106 ~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 185 (769)
.+|.++++|+.++|.++ ++..-..+|.++ +|+.+.+..+ ++..-...|.. .+|+.+.+..+ ++..-...|.+. +
T Consensus 63 ~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~-~~~i~~~~F~~~-~ 136 (379)
T 4h09_A 63 ANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGA-TTEIGNYIFYNS-S 136 (379)
T ss_dssp TTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTT-CCEECTTTTTTC-C
T ss_pred HHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCc-cccccccccccc-e
Confidence 46788888888888654 554445677776 5777776644 44333344544 47888888765 332333445544 5
Q ss_pred CCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCC------------------------------------CCCC
Q 004195 186 LSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIP------------------------------------DLRN 229 (769)
Q Consensus 186 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p------------------------------------~l~~ 229 (769)
|+.+.+..+ ++..-...|.++.+++.+.+..+....... .+..
T Consensus 137 l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~ 215 (379)
T 4h09_A 137 VKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGFSY 215 (379)
T ss_dssp CCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTTTT
T ss_pred eeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEeeccccc
Confidence 666655543 444555677777888877766543221100 0122
Q ss_pred CccCcEEeccCCcC--CCCCcccccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEE
Q 004195 230 LKNLRVFDVQDNYF--GPRFPRLHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLD 307 (769)
Q Consensus 230 l~~L~~l~l~~N~l--~~~~p~~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 307 (769)
..+|+.+.+..+-- ..........|..+.+..+ ++ .+....|..+.+|+.+.+..+ +.......|.++++|+.+.
T Consensus 216 ~~~l~~i~~~~~~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~ 292 (379)
T 4h09_A 216 GKNLKKITITSGVTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVV 292 (379)
T ss_dssp CSSCSEEECCTTCCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEE
T ss_pred ccccceeeeccceeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ceecccccccccccccccc
Confidence 22333333322200 0000001234444444433 21 232444555555655555432 3322233455566666666
Q ss_pred ccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEEC
Q 004195 308 IHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLY 356 (769)
Q Consensus 308 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l 356 (769)
+.++.++..-...|.++.+|+.++|..+ ++-.-..+|..+.+|+.+.+
T Consensus 293 l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 293 MDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp ECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred ccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEE
Confidence 6655555555555666666666666433 33233344555555554444
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.12 E-value=6.9e-06 Score=87.82 Aligned_cols=139 Identities=13% Similarity=0.119 Sum_probs=88.6
Q ss_pred CcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCc--eeeEeeeeeccCCCCCCcceEEEE
Q 004195 484 SSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSN--LVSALGHCLDFSLDDPSISIIYLI 561 (769)
Q Consensus 484 ~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~n--Iv~l~~~~~~~~~~~~~~~~~~lV 561 (769)
..+.++.|....+|+... +|..+++|..... ..+.+|..+++.+.... +.++++++.+.. +..++|
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~------g~~~lv 112 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSE------SLTYCI 112 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS------SCEEEE
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCC------CCeEEE
Confidence 456788899999999886 4788999987432 36889999999886433 456666665422 236999
Q ss_pred EeccCCCchhhh------------------hcCC--C--CC------------CCHHHHH--------------------
Q 004195 562 FEYAPNETLRSF------------------ISGP--G--YK------------LTWVQRI-------------------- 587 (769)
Q Consensus 562 ~Ey~~~gsL~~~------------------l~~~--~--~~------------l~~~~~~-------------------- 587 (769)
|||++|.++.+. ++.. . .. -.|....
T Consensus 113 ~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~ 192 (362)
T 3ovc_A 113 SRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVS 192 (362)
T ss_dssp EECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTH
T ss_pred EEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999998666421 1100 0 00 0121110
Q ss_pred ----HHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchh
Q 004195 588 ----AAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 588 ----~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
..+..+.+-+..+-. .+.++|+|+.+.||+++++..+.|.||+.+..
T Consensus 193 ~~~~~~~~~l~~~l~~lp~--~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 193 ASVAQALDELMLWAEDCPE--VRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHHHHHHHHGGGCCC--CCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred ccchHHHHHHHHHHhhCCC--CcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 111222222222221 25789999999999998887889999998754
No 423
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.94 E-value=6.1e-05 Score=81.66 Aligned_cols=75 Identities=7% Similarity=-0.033 Sum_probs=49.0
Q ss_pred cCccccCCceeEEEEEeC-CCcEEEEEEccccCC-------CChhHHHHHHHHHhhccC--Cce-eeEeeeeeccCCCCC
Q 004195 485 SSFMCDASHGQIYKGKLT-DGTLVAIRSLKMSKK-------SSPHMYTYHIELISKLRH--SNL-VSALGHCLDFSLDDP 553 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-------~~~~~~~~Ei~~l~~l~H--~nI-v~l~~~~~~~~~~~~ 553 (769)
.+.||.|..+.||+++.. +++.|+||....... ...+.+.+|.++++.+.. +.. .+++.+.. +.
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d~--~~--- 109 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDT--EM--- 109 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEET--TT---
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEcC--Cc---
Confidence 467899999999999865 478899998653211 123567889999988742 333 35554321 11
Q ss_pred CcceEEEEEeccCCC
Q 004195 554 SISIIYLIFEYAPNE 568 (769)
Q Consensus 554 ~~~~~~lV~Ey~~~g 568 (769)
.++||||+++.
T Consensus 110 ----~~lvmE~l~g~ 120 (397)
T 2olc_A 110 ----AVTVMEDLSHL 120 (397)
T ss_dssp ----TEEEECCCTTS
T ss_pred ----cEEEEEeCCCc
Confidence 47999999864
No 424
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.88 E-value=0.00086 Score=71.92 Aligned_cols=243 Identities=10% Similarity=0.025 Sum_probs=149.7
Q ss_pred cccCCCCCCcEEEeecccccCCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCCccCCccCcCCcC
Q 004195 106 STLGSLSSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFTGAVPSELSLLQV 185 (769)
Q Consensus 106 ~~~~~l~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 185 (769)
+++....+|+.+.+.. .++..-..+|.++.+|+.++|..+ ++..-..+|.++ +|+.+.+..| ++..-...|.. .+
T Consensus 40 ~~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~ 114 (379)
T 4h09_A 40 PWYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TD 114 (379)
T ss_dssp TTGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CC
T ss_pred cccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CC
Confidence 3456667888888864 455555678999999999999765 665556678887 6888887654 55344556665 48
Q ss_pred CCEEeccCCCCcccCCccccCCCCCCEEEccCccccccCCCCCCCccCcEEeccCCcCCCC-------------------
Q 004195 186 LSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANHLSGEIPDLRNLKNLRVFDVQDNYFGPR------------------- 246 (769)
Q Consensus 186 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~l~~l~~L~~l~l~~N~l~~~------------------- 246 (769)
|+.+.+..+ ++..-...|.+. +|+.+.+..+--.-....+..+.+|+...+..+.....
T Consensus 115 L~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (379)
T 4h09_A 115 LDDFEFPGA-TTEIGNYIFYNS-SVKRIVIPKSVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPA 192 (379)
T ss_dssp CSEEECCTT-CCEECTTTTTTC-CCCEEEECTTCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCT
T ss_pred cccccCCCc-cccccccccccc-eeeeeeccceeeccccchhcccccccccccccccceeecccceecccccceeccccc
Confidence 999999865 333344555554 56666665432111122355666666665544322100
Q ss_pred --------Ccc-----------cccCCcEEEeCCccccCCcCchhhcCCCcCcEEeccCccccccCCccCCCCCCCCEEE
Q 004195 247 --------FPR-----------LHKKMVTLVLRNNRFQFGLNPDELRSYNQLQKLDISLNRFVGPFIPSLLSLPSITYLD 307 (769)
Q Consensus 247 --------~p~-----------~~~~L~~L~l~~N~~~~~i~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 307 (769)
+|. ....+..+.+..+-- .+....+..+..|+.+.+..+ ++..-...|.++.+|+.+.
T Consensus 193 ~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~~~--~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~ 269 (379)
T 4h09_A 193 AKTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSGVT--TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLN 269 (379)
T ss_dssp TCCCSEEECCTTCCEECTTTTTTCSSCSEEECCTTCC--EECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEE
T ss_pred cccccccccccceeEEeecccccccccceeeecccee--EEccccccCCccceEEEcCCC-ccEeCccccceeehhcccc
Confidence 000 012344444433311 222445666777777777654 4443445677777888887
Q ss_pred ccCCcCCccccccCCCCCCCcEEEccCCcCCCCCCccccccCCCceEECCCC
Q 004195 308 IHGNKLTGLLLQNMSCNPQLAFVDLSSNLLTGYLPSCLQVEAKTRLVLYSKN 359 (769)
Q Consensus 308 l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~g~~p~~~~~~~~l~~l~l~~N 359 (769)
+..+ ++......|..+++|+.+++.++.++..-..+|..+.+|+.+.+..+
T Consensus 270 l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 270 FYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp ECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred cccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc
Confidence 7543 55555567777888888888877777666677777777887777543
No 425
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.84 E-value=8.6e-05 Score=76.57 Aligned_cols=77 Identities=14% Similarity=0.142 Sum_probs=56.9
Q ss_pred CCCcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCC---ceeeEeeeeeccCCCCCCcceE
Q 004195 482 FDSSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHS---NLVSALGHCLDFSLDDPSISII 558 (769)
Q Consensus 482 f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~---nIv~l~~~~~~~~~~~~~~~~~ 558 (769)
......+|.|..+.||+.+..||+.|.+|+-..........|.+|...|+.+.-. -+.+++++.. -
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~-----------~ 85 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWDD-----------R 85 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEET-----------T
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEeccC-----------c
Confidence 3445778999999999999999999999987655444456789999999888421 2445554422 2
Q ss_pred EEEEeccCCCc
Q 004195 559 YLIFEYAPNET 569 (769)
Q Consensus 559 ~lV~Ey~~~gs 569 (769)
++||||++++.
T Consensus 86 ~lv~e~l~~~~ 96 (288)
T 3f7w_A 86 TLAMEWVDERP 96 (288)
T ss_dssp EEEEECCCCCC
T ss_pred eEEEEeecccC
Confidence 78999998654
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.72 E-value=4.5e-05 Score=80.73 Aligned_cols=143 Identities=12% Similarity=0.114 Sum_probs=79.2
Q ss_pred CccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccC--CceeeEeeeeeccCCCCCCcceEEEEEe
Q 004195 486 SFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRH--SNLVSALGHCLDFSLDDPSISIIYLIFE 563 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H--~nIv~l~~~~~~~~~~~~~~~~~~lV~E 563 (769)
..|+.|..+.||++...+| .+++|+... ....+..|..+++.++. -.+.+++... ++..-....+..++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~-~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGILPNK-KGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBCCCT-TSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCceeecC-CCCEEEEECCEEEEEEE
Confidence 4465677899999987655 488998864 23455567777766641 1233333211 00000001234789999
Q ss_pred ccCCCchh-----------h---hhc---C-C--C-------CCCCHHHHH-----------------------------
Q 004195 564 YAPNETLR-----------S---FIS---G-P--G-------YKLTWVQRI----------------------------- 587 (769)
Q Consensus 564 y~~~gsL~-----------~---~l~---~-~--~-------~~l~~~~~~----------------------------- 587 (769)
|++|..+. + .+| . . . ..-.|....
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 0 111 1 0 0 012343211
Q ss_pred --HHHHHHHHHhccccc----------CCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 588 --AAAIAIVKGVQFLHT----------GIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 588 --~i~~~ia~gL~yLH~----------~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
.+...+.+++++|+. ...+.++|+|+++.||+++.++.+.|+||+.+
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a 250 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTV 250 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhc
Confidence 011123345666653 12358999999999999988888999999865
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.62 E-value=0.00019 Score=74.63 Aligned_cols=137 Identities=13% Similarity=0.139 Sum_probs=89.3
Q ss_pred CcCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhcc---CCceeeEeeeeeccCCCCCCcceEEE
Q 004195 484 SSSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLR---HSNLVSALGHCLDFSLDDPSISIIYL 560 (769)
Q Consensus 484 ~~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~---H~nIv~l~~~~~~~~~~~~~~~~~~l 560 (769)
..+.|+.|....+|+... ++..+++|+.... ....+.+|.+.|+.+. ...+.++++++... +..++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~-------g~~~l 108 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQ-------GHSFL 108 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECS-------SEEEE
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecC-------CceEE
Confidence 346789999999999986 4667888987643 3567899999998884 25677888877542 23799
Q ss_pred EEeccCCCchhh--------h---hcCC-C-C-------------------CCCHHHHH---HHHH--H-----------
Q 004195 561 IFEYAPNETLRS--------F---ISGP-G-Y-------------------KLTWVQRI---AAAI--A----------- 592 (769)
Q Consensus 561 V~Ey~~~gsL~~--------~---l~~~-~-~-------------------~l~~~~~~---~i~~--~----------- 592 (769)
||||+++..+.. . ++.. . . .-+|.... ++.. +
T Consensus 109 vme~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~ 188 (312)
T 3jr1_A 109 LLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGN 188 (312)
T ss_dssp EEECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSC
T ss_pred EEEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHH
Confidence 999999876421 1 1211 0 0 12465322 1111 1
Q ss_pred ---HHHH-hccccc-CCCCCccccCccccceeeCCCceeeecCCC
Q 004195 593 ---IVKG-VQFLHT-GIVPGVFSNNLKITDVLLDENFHVKINSYN 632 (769)
Q Consensus 593 ---ia~g-L~yLH~-~~~~~ivHrDlKp~NILld~~~~~kl~DFG 632 (769)
+++. ...|.. ...|.++|+|+.+.|++++.++ +.|.||.
T Consensus 189 ~~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 189 IDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1111 123321 2356899999999999999887 8899984
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.46 E-value=3.6e-05 Score=72.13 Aligned_cols=82 Identities=11% Similarity=0.139 Sum_probs=36.9
Q ss_pred cCceeeccCcccCCcCCccccCCCcCCEEEcccCc-CCccCCccCcCC----cCCCEEeccCCC-CcccCCccccCCCCC
Q 004195 137 SLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNK-FTGAVPSELSLL----QVLSVLSLKNNS-LSGFLPVSLTGLQSL 210 (769)
Q Consensus 137 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~l~~l~~L 210 (769)
+|+.|||+++.++..--..+.++++|+.|+|+++. ++..-=..+..+ ++|++|+|+++. +|..--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34555555554443222334455555555555553 332111122322 245555555543 442222334455666
Q ss_pred CEEEccCc
Q 004195 211 RVVSLSAN 218 (769)
Q Consensus 211 ~~L~ls~N 218 (769)
+.|+++++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 66666654
No 429
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.43 E-value=0.00042 Score=72.54 Aligned_cols=164 Identities=13% Similarity=0.117 Sum_probs=89.8
Q ss_pred cccCHHHHHHHhcCCCC-----cCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCce--ee
Q 004195 468 RTFTLDELKEATDCFDS-----SSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNL--VS 540 (769)
Q Consensus 468 ~~~~~~el~~~t~~f~~-----~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nI--v~ 540 (769)
..++.+++......|.. .+.|+.|....+|+....+| .+++|..... ...+.+..|+.++..++...+ .+
T Consensus 5 ~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 5 TDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred ccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCc
Confidence 34667777777777764 23456687889999987666 5788988642 233567788888887753222 33
Q ss_pred EeeeeeccCCCCCCcceEEEEEeccCCCchhh-----------h---hc----C--CCC-----CCCHHHHHHH------
Q 004195 541 ALGHCLDFSLDDPSISIIYLIFEYAPNETLRS-----------F---IS----G--PGY-----KLTWVQRIAA------ 589 (769)
Q Consensus 541 l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~-----------~---l~----~--~~~-----~l~~~~~~~i------ 589 (769)
++... ++..-....+..+++|||++|..+.. . ++ . ... ...|.....-
T Consensus 82 ~~~~~-~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 82 PLPRK-DGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp BCCBT-TCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred ccCCC-CCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 33211 10000000134689999998765321 0 11 1 000 0124321110
Q ss_pred ------HHHHHHHhccccc----CCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 590 ------AIAIVKGVQFLHT----GIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 590 ------~~~ia~gL~yLH~----~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...+.+.++++++ ...+.++|+|+.+.||+++++..+.|+||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 0012233333332 123479999999999999987666899998763
No 430
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.35 E-value=0.0017 Score=67.96 Aligned_cols=162 Identities=6% Similarity=0.050 Sum_probs=90.7
Q ss_pred cccCHHHHHHHhcCCCC-----cCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCc--eee
Q 004195 468 RTFTLDELKEATDCFDS-----SSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSN--LVS 540 (769)
Q Consensus 468 ~~~~~~el~~~t~~f~~-----~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~n--Iv~ 540 (769)
...+.+++..+.+.|.. ...++ |....||+....+|+.+++|...... ...+.+..|..+++.++... +.+
T Consensus 9 ~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~ 86 (328)
T 1zyl_A 9 QTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAA 86 (328)
T ss_dssp CCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCC
T ss_pred CCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecc
Confidence 34555666555554432 23466 77889999887778789999986432 24567888999888885222 344
Q ss_pred EeeeeeccCCCCCCcceEEEEEeccCCCchhh-----------h---hc----CC----CCCCCHHHH------------
Q 004195 541 ALGHCLDFSLDDPSISIIYLIFEYAPNETLRS-----------F---IS----GP----GYKLTWVQR------------ 586 (769)
Q Consensus 541 l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~-----------~---l~----~~----~~~l~~~~~------------ 586 (769)
++.. ++..-....+..++||||++|..+.. . ++ .. ....++...
T Consensus 87 ~~~~--~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (328)
T 1zyl_A 87 PVAF--NGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDAT 164 (328)
T ss_dssp CCCB--TTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCS
T ss_pred eeec--CCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcC
Confidence 4433 11110001234688999998754321 1 11 10 112232211
Q ss_pred ----------HHHHHHHHHHhcc-cccCCCCCccccCccccceeeCCCceeeecCCCCch
Q 004195 587 ----------IAAAIAIVKGVQF-LHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 587 ----------~~i~~~ia~gL~y-LH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
...+..++..++- +.....+.++|+|+++.||+++ + .+.|.||+.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 165 LIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp SSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 0011111111211 1111234689999999999999 4 88999998653
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.23 E-value=0.0011 Score=72.25 Aligned_cols=30 Identities=7% Similarity=0.252 Sum_probs=26.5
Q ss_pred CCccccCccccceeeCCCceeeecCCCCchh
Q 004195 606 PGVFSNNLKITDVLLDENFHVKINSYNLPLL 636 (769)
Q Consensus 606 ~~ivHrDlKp~NILld~~~~~kl~DFGla~~ 636 (769)
+.++|+|++|.|||++.++ +++.||+.+..
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 4899999999999998776 99999998754
No 432
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.22 E-value=0.0001 Score=69.11 Aligned_cols=84 Identities=11% Similarity=0.051 Sum_probs=59.9
Q ss_pred CCCcEEEeecccccCCCCccccCCCcCceeeccCcc-cCCcCCccccCC----CcCCEEEcccCc-CCccCCccCcCCcC
Q 004195 112 SSLKVLSLVSLGLWGPLPGSIAHSSSLEILNLSSNY-LSGSIPVQISSL----RNLQTLILDDNK-FTGAVPSELSLLQV 185 (769)
Q Consensus 112 ~~L~~L~L~~n~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~ 185 (769)
.+|+.|||+++.++..--..+.++++|+.|+|++|. |+..-=..++.+ ++|++|+|++|. ++..-=..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 468889999888765433457788899999999885 664333345554 379999999874 66433345677899
Q ss_pred CCEEeccCCC
Q 004195 186 LSVLSLKNNS 195 (769)
Q Consensus 186 L~~L~L~~N~ 195 (769)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999998874
No 433
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.08 E-value=0.0014 Score=67.79 Aligned_cols=71 Identities=6% Similarity=-0.040 Sum_probs=44.5
Q ss_pred cCccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCce-eeEeeeeeccCCCCCCcceEEEEEe
Q 004195 485 SSFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNL-VSALGHCLDFSLDDPSISIIYLIFE 563 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nI-v~l~~~~~~~~~~~~~~~~~~lV~E 563 (769)
.+.|+.|....+|+. ..+++|+...... ...+..+|..+++.+....+ .++++++.+ . -++|+|
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~~~--~-------~~~v~e 87 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVDPA--T-------GVMVTR 87 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTT--T-------CCEEEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEECC--C-------CEEEEe
Confidence 577888999999999 4588888764321 11234668888877753233 355554322 1 268999
Q ss_pred cc-CCCch
Q 004195 564 YA-PNETL 570 (769)
Q Consensus 564 y~-~~gsL 570 (769)
|+ ++.++
T Consensus 88 ~i~~g~~l 95 (301)
T 3dxq_A 88 YIAGAQTM 95 (301)
T ss_dssp CCTTCEEC
T ss_pred ecCCCccC
Confidence 99 65444
No 434
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.93 E-value=0.0029 Score=66.45 Aligned_cols=30 Identities=7% Similarity=0.043 Sum_probs=26.2
Q ss_pred CCccccCccccceeeCCC----ceeeecCCCCch
Q 004195 606 PGVFSNNLKITDVLLDEN----FHVKINSYNLPL 635 (769)
Q Consensus 606 ~~ivHrDlKp~NILld~~----~~~kl~DFGla~ 635 (769)
+.++|||+.+.||+++.+ ..+.|.||+.+.
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~ 216 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK 216 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence 479999999999999875 678999999764
No 435
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.83 E-value=0.0046 Score=65.94 Aligned_cols=138 Identities=11% Similarity=0.046 Sum_probs=82.2
Q ss_pred CccccCCceeEEEEEeC--------CCcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCcc
Q 004195 486 SFMCDASHGQIYKGKLT--------DGTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSIS 556 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~--------~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~ 556 (769)
+.+..|-...+|++... +++.+++|+... .........+|.++++.+. +.-..++++++.+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~--------- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE--------- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT---------
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC---------
Confidence 45666778899999874 247899998632 2234567789999998885 3333566666532
Q ss_pred eEEEEEeccCCCchhhh-----------------hcCC----CCCCC--HHHHHHHHHHHHHH-----------------
Q 004195 557 IIYLIFEYAPNETLRSF-----------------ISGP----GYKLT--WVQRIAAAIAIVKG----------------- 596 (769)
Q Consensus 557 ~~~lV~Ey~~~gsL~~~-----------------l~~~----~~~l~--~~~~~~i~~~ia~g----------------- 596 (769)
.+||||++|..+..- +|.. +.... |.+..++..++...
T Consensus 126 --g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 203 (379)
T 3feg_A 126 --GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLK 203 (379)
T ss_dssp --EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHH
T ss_pred --ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHH
Confidence 389999998655311 1111 11122 45555555444221
Q ss_pred --hcc----ccc-CCCCCccccCccccceeeCCC----ceeeecCCCCch
Q 004195 597 --VQF----LHT-GIVPGVFSNNLKITDVLLDEN----FHVKINSYNLPL 635 (769)
Q Consensus 597 --L~y----LH~-~~~~~ivHrDlKp~NILld~~----~~~kl~DFGla~ 635 (769)
++. |.. .....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 204 ~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 204 DEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 112 211 122368999999999999876 689999998763
No 436
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.81 E-value=0.005 Score=67.42 Aligned_cols=74 Identities=12% Similarity=-0.033 Sum_probs=48.0
Q ss_pred cCccccCCceeEEEEEeCC-CcEEEEEEccccCCCChhHHHHHHHHHhhccCCce-eeEeeeeeccCCCCCCcceEEEEE
Q 004195 485 SSFMCDASHGQIYKGKLTD-GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNL-VSALGHCLDFSLDDPSISIIYLIF 562 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nI-v~l~~~~~~~~~~~~~~~~~~lV~ 562 (769)
.+.|+.|-...+|++...+ +..+++|+..... ...-+..+|..+++.+...++ .++++++.. .+||
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~~idR~~E~~vl~~L~~~gl~P~ll~~~~~-----------G~v~ 180 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DEIINREREKKISCILYNKNIAKKIYVFFTN-----------GRIE 180 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C-CSCSCHHHHHHHHHHHTTSSSBCCEEEEETT-----------EEEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hhhcCHHHHHHHHHHHHhcCCCCCEEEEeCC-----------eEEE
Confidence 3567778889999999865 5788888774321 111123688999998865444 466666521 3599
Q ss_pred eccCCCch
Q 004195 563 EYAPNETL 570 (769)
Q Consensus 563 Ey~~~gsL 570 (769)
||++|.++
T Consensus 181 e~I~G~~l 188 (458)
T 2qg7_A 181 EFMDGYAL 188 (458)
T ss_dssp ECCCSEEC
T ss_pred EeeCCccC
Confidence 99987554
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.80 E-value=0.0048 Score=67.20 Aligned_cols=73 Identities=15% Similarity=0.148 Sum_probs=50.4
Q ss_pred cCccccCCceeEEEEEeCC--------CcEEEEEEccccCCCChhHHHHHHHHHhhccCCce-eeEeeeeeccCCCCCCc
Q 004195 485 SSFMCDASHGQIYKGKLTD--------GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNL-VSALGHCLDFSLDDPSI 555 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~--------g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nI-v~l~~~~~~~~~~~~~~ 555 (769)
.+.|+.|....||++...+ +..+++|+.... ...+.+.+|..+++.+...++ .++++.+.+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~-------- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG-------- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT--------
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC--------
Confidence 3567788889999998753 478999987421 222566789999988853333 566665532
Q ss_pred ceEEEEEeccCCCch
Q 004195 556 SIIYLIFEYAPNETL 570 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL 570 (769)
.+||||++|.++
T Consensus 148 ---g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 ---GRLEEYIPSRPL 159 (429)
T ss_dssp ---EEEECCCCEEEC
T ss_pred ---CEEEEEeCCccc
Confidence 389999986444
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.67 E-value=0.0024 Score=56.87 Aligned_cols=11 Identities=36% Similarity=0.613 Sum_probs=4.1
Q ss_pred CEEEcccCcCC
Q 004195 163 QTLILDDNKFT 173 (769)
Q Consensus 163 ~~L~L~~N~l~ 173 (769)
++|+|++|+|+
T Consensus 34 ~~L~Ls~N~l~ 44 (130)
T 3rfe_A 34 TELVLTGNNLT 44 (130)
T ss_dssp SEEECTTSCCS
T ss_pred CEEECCCCcCC
Confidence 33333333333
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.58 E-value=0.0028 Score=56.38 Aligned_cols=56 Identities=25% Similarity=0.296 Sum_probs=34.4
Q ss_pred EEEeeccccc-CCCCccccCCCcCceeeccCcccCCcCCccccCCCcCCEEEcccCcCC
Q 004195 116 VLSLVSLGLW-GPLPGSIAHSSSLEILNLSSNYLSGSIPVQISSLRNLQTLILDDNKFT 173 (769)
Q Consensus 116 ~L~L~~n~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 173 (769)
.++.++++++ ..+|..+. .+|++|+|++|+|+...+..|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 3455555554 24454332 35777777777777555556677777777777777653
No 440
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.53 E-value=0.004 Score=66.42 Aligned_cols=73 Identities=14% Similarity=0.034 Sum_probs=44.0
Q ss_pred CccccCCceeEEEEEeCC---------CcEEEEEEccccCCCChhHHHHHHHHHhhccCCc-eeeEeeeeeccCCCCCCc
Q 004195 486 SFMCDASHGQIYKGKLTD---------GTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSN-LVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~---------g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~n-Iv~l~~~~~~~~~~~~~~ 555 (769)
..++.|....+|+....+ +..+++|+...... ...+..+|.++++.+...+ +.++++...
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~~--------- 108 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTFN--------- 108 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEET---------
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEecC---------
Confidence 456778888999998754 26788888753211 1113467888888885333 346665431
Q ss_pred ceEEEEEeccCCCch
Q 004195 556 SIIYLIFEYAPNETL 570 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL 570 (769)
-++||||++|..+
T Consensus 109 --~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 --GGRIEEWLYGDPL 121 (369)
T ss_dssp --TEEEEECCCSEEC
T ss_pred --CcEEEEEecCCcC
Confidence 1689999987544
No 441
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.51 E-value=0.0005 Score=65.63 Aligned_cols=112 Identities=18% Similarity=0.182 Sum_probs=59.6
Q ss_pred cCCCCCCcEEEeecc-cccC----CCCccccCCCcCceeeccCcccCCc----CCccccCCCcCCEEEcccCcCCcc---
Q 004195 108 LGSLSSLKVLSLVSL-GLWG----PLPGSIAHSSSLEILNLSSNYLSGS----IPVQISSLRNLQTLILDDNKFTGA--- 175 (769)
Q Consensus 108 ~~~l~~L~~L~L~~n-~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~~~--- 175 (769)
+.+-+.|+.|+|++| .+.. .+-..+..-+.|+.|+|++|+|... +-..+..-+.|++|+|+.|.|+..
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 344567778888775 5532 1333455566777777777777522 223333456677777777776532
Q ss_pred -CCccCcCCcCCCEEeccCC---CCccc----CCccccCCCCCCEEEccCcc
Q 004195 176 -VPSELSLLQVLSVLSLKNN---SLSGF----LPVSLTGLQSLRVVSLSANH 219 (769)
Q Consensus 176 -~p~~~~~l~~L~~L~L~~N---~l~~~----~p~~l~~l~~L~~L~ls~N~ 219 (769)
+-..+..-+.|++|+|++| .+... +...+..=+.|+.|+++.|.
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 2223444455666666644 22211 22233333556666665544
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.11 E-value=0.001 Score=63.50 Aligned_cols=88 Identities=16% Similarity=0.143 Sum_probs=49.5
Q ss_pred cccCCCcCceeeccCc-ccCC----cCCccccCCCcCCEEEcccCcCCcc----CCccCcCCcCCCEEeccCCCCccc--
Q 004195 131 SIAHSSSLEILNLSSN-YLSG----SIPVQISSLRNLQTLILDDNKFTGA----VPSELSLLQVLSVLSLKNNSLSGF-- 199 (769)
Q Consensus 131 ~~~~l~~L~~L~Ls~N-~l~g----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~-- 199 (769)
.+.+-+.|+.|+|++| .|.. .+-..+..-+.|+.|+|++|+|... +...+..-+.|+.|+|++|.|+..
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3455667888888875 6542 1233455556777777777777522 223334456677777777776532
Q ss_pred --CCccccCCCCCCEEEccCc
Q 004195 200 --LPVSLTGLQSLRVVSLSAN 218 (769)
Q Consensus 200 --~p~~l~~l~~L~~L~ls~N 218 (769)
+-..+..=+.|+.|+|++|
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHhhCCceeEEECCCC
Confidence 1223333345666666543
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.67 E-value=0.035 Score=58.23 Aligned_cols=30 Identities=13% Similarity=0.277 Sum_probs=26.8
Q ss_pred CCccccCccccceeeCCCceeeecCCCCch
Q 004195 606 PGVFSNNLKITDVLLDENFHVKINSYNLPL 635 (769)
Q Consensus 606 ~~ivHrDlKp~NILld~~~~~kl~DFGla~ 635 (769)
+.++|+|+.+.||++++++.+.+.||+.+.
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~ 235 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPM 235 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence 479999999999999988889999998764
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.32 E-value=0.054 Score=57.86 Aligned_cols=139 Identities=12% Similarity=0.107 Sum_probs=80.3
Q ss_pred CccccCCceeEEEEEeCC--------CcEEEEEEccccCCC------------------ChhHHHHHHHHHhhcc-CCce
Q 004195 486 SFMCDASHGQIYKGKLTD--------GTLVAIRSLKMSKKS------------------SPHMYTYHIELISKLR-HSNL 538 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~--------g~~vAvK~~~~~~~~------------------~~~~~~~Ei~~l~~l~-H~nI 538 (769)
+.|..|-...+|++..++ +..|.+++.-..... +.+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667778999998753 367888876432110 1112335888888885 4444
Q ss_pred eeEeeeeeccCCCCCCcceEEEEEeccCCCchhh--h---------------hcCC----CCCCC--HHHHHHHHHHHHH
Q 004195 539 VSALGHCLDFSLDDPSISIIYLIFEYAPNETLRS--F---------------ISGP----GYKLT--WVQRIAAAIAIVK 595 (769)
Q Consensus 539 v~l~~~~~~~~~~~~~~~~~~lV~Ey~~~gsL~~--~---------------l~~~----~~~l~--~~~~~~i~~~ia~ 595 (769)
.++++++.+ .+|+||+++-+|.. + +|.. ..... |....++..++..
T Consensus 138 Pkl~~~~~~-----------G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~ 206 (401)
T 3f2s_A 138 PKLYGIFPQ-----------GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLR 206 (401)
T ss_dssp CCEEEEETT-----------EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCC-----------CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHh
Confidence 567776532 38999999755421 1 1111 11122 3344444333211
Q ss_pred ----------------------Hh----ccccc-CCCCCccccCccccceeeCCC------ceeeecCCCCch
Q 004195 596 ----------------------GV----QFLHT-GIVPGVFSNNLKITDVLLDEN------FHVKINSYNLPL 635 (769)
Q Consensus 596 ----------------------gL----~yLH~-~~~~~ivHrDlKp~NILld~~------~~~kl~DFGla~ 635 (769)
-+ +++.. .....++|+|+.+.||+++++ +.+.++||..+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 207 IKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp CCCCSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred ccCcchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 11 11222 123358999999999999876 789999998653
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.10 E-value=0.12 Score=55.81 Aligned_cols=74 Identities=9% Similarity=0.024 Sum_probs=48.3
Q ss_pred cCccccCCceeEEEEEeCC--------CcEEEEEEccccCCCChhHHHHHHHHHhhcc-CCceeeEeeeeeccCCCCCCc
Q 004195 485 SSFMCDASHGQIYKGKLTD--------GTLVAIRSLKMSKKSSPHMYTYHIELISKLR-HSNLVSALGHCLDFSLDDPSI 555 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~--------g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~~~~~~~~~~~~~~ 555 (769)
.+.+..|-...+|+....+ ++.+++|+..... ...-+..+|..+++.+. +.-..++++.+.
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~--------- 144 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP--------- 144 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET---------
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC---------
Confidence 3456667788999998763 5789998864322 12223567888888885 332345555432
Q ss_pred ceEEEEEeccCCCch
Q 004195 556 SIIYLIFEYAPNETL 570 (769)
Q Consensus 556 ~~~~lV~Ey~~~gsL 570 (769)
-+.||||++|..|
T Consensus 145 --~~~I~efI~G~~l 157 (424)
T 3mes_A 145 --EGRIEEFIDGEPL 157 (424)
T ss_dssp --TEEEEECCCSEEC
T ss_pred --CCEEEEEeCCccC
Confidence 1689999998664
No 446
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.94 E-value=0.021 Score=54.74 Aligned_cols=100 Identities=9% Similarity=-0.007 Sum_probs=63.5
Q ss_pred CchhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccCccccceeeCCCceeeecCCCCchhhhccCCcceee
Q 004195 568 ETLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLPLLAEARGKGSAEV 647 (769)
Q Consensus 568 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~ 647 (769)
-+|.++|...+.++++.+.+.++.|.+++|.-+-....+ ..+=+-|..|++..+|.+...+ +.+. . .
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~-----~-----~ 99 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD-----A-----G 99 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc-----c-----c
Confidence 479999986666899999999999999998765110000 1122346889999999988875 2111 0 0
Q ss_pred cCCCcchhhhccCCCCCCCCeeehhHHHHHHHhC
Q 004195 648 SSPAKKTSVLARTEQDDKSDVYDIGIILIEIIVG 681 (769)
Q Consensus 648 ~~~~~~pe~~~~~~~~~ksDVwS~Gvil~elltG 681 (769)
.....+|+.. ....+.+.=|||+|+++|.-+--
T Consensus 100 ~~~~~~pe~~-~~~~te~~~IysLG~tLY~ALDy 132 (229)
T 2yle_A 100 EPPPVAGKLG-YSQCMETEVIESLGIIIYKALDY 132 (229)
T ss_dssp -------CCS-SSSSCHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCChhhc-cccchHHHHHHHHHHHHHHHhhc
Confidence 1112223322 23456777899999999998863
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.63 E-value=0.74 Score=49.23 Aligned_cols=28 Identities=14% Similarity=0.272 Sum_probs=23.7
Q ss_pred ccccCccccceee------CCCceeeecCCCCch
Q 004195 608 VFSNNLKITDVLL------DENFHVKINSYNLPL 635 (769)
Q Consensus 608 ivHrDlKp~NILl------d~~~~~kl~DFGla~ 635 (769)
++|+|+.+.||++ +++..++++||-.|.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 5799999999999 456679999998764
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=84.08 E-value=0.065 Score=36.76 Aligned_cols=29 Identities=21% Similarity=0.243 Sum_probs=12.7
Q ss_pred CCcceeeeeecceehhhhhhheeeeeeee
Q 004195 390 NKSSYASSVVGGTVGGIAVVGAVLLVVKK 418 (769)
Q Consensus 390 ~~~~~~~~iv~~~~~~~~~~~~~~~~~~~ 418 (769)
...++++++++|+++.++++++++++++|
T Consensus 9 ~~~~IA~gVVgGv~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 9 KIPSIATGMVGALLLLLVVALGIGLFMRR 37 (44)
T ss_dssp CSSSSTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcceEEeehhHHHHHHHHHHHHHHHHhhh
Confidence 33444445555444443333344444444
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=79.20 E-value=0.26 Score=53.92 Aligned_cols=59 Identities=5% Similarity=-0.134 Sum_probs=17.2
Q ss_pred cCccccCCceeEEEEEeCC-CcEEEE------EEccccCC--CChhHHHHHHHHHhhccCCceeeEeeeee
Q 004195 485 SSFMCDASHGQIYKGKLTD-GTLVAI------RSLKMSKK--SSPHMYTYHIELISKLRHSNLVSALGHCL 546 (769)
Q Consensus 485 ~~~iG~G~~g~Vy~~~~~~-g~~vAv------K~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~ 546 (769)
.+.+| ||.||+|.+.. ...||| |..+.... .....+.+|..+++..+|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 45565 99999999864 467888 76654321 22346888999999999999999988764
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=78.41 E-value=5.6 Score=37.95 Aligned_cols=114 Identities=9% Similarity=0.072 Sum_probs=73.9
Q ss_pred cCCceeeEeeeeeccCCCCCCcceEEEEEeccCCC-chhhhhcCCCCCCCHHHHHHHHHHHHHHhcccccCCCCCccccC
Q 004195 534 RHSNLVSALGHCLDFSLDDPSISIIYLIFEYAPNE-TLRSFISGPGYKLTWVQRIAAAIAIVKGVQFLHTGIVPGVFSNN 612 (769)
Q Consensus 534 ~H~nIv~l~~~~~~~~~~~~~~~~~~lV~Ey~~~g-sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrD 612 (769)
.||+.+.. .+-.+. +.+.+.|+.-+.+ +... ++ .++...+++++..|+.-.++++.. +|--
T Consensus 43 ~~~~Fl~~-~I~e~e-------D~v~~~y~~~~~~~~f~~-ik----~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~ 104 (215)
T 4ann_A 43 HSPYFIDA-ELTELR-------DSFQIHYDINDNHTPFDN-IK----SFTKNEKLRYLLNIKNLEEVNRTR-----YTFV 104 (215)
T ss_dssp CCTTBCCE-EEEECS-------SEEEEEECCCTTSEEGGG-GG----GSCHHHHHHHHHHGGGGGGGGGSS-----EECC
T ss_pred cCCcccce-EEEEcc-------cEEEEEEEcCcccCCHHH-HH----hcCHHHHHHHHHHHHHHHHHhcCc-----eEEE
Confidence 68888865 333322 2255555554322 2322 33 467889999999999988777754 6778
Q ss_pred ccccceeeCCCceeeecCCCCchhhhccCCcceeecCCCc-chhhhccCCCCCCCCeeehhHHHHHHHhCCCCCC
Q 004195 613 LKITDVLLDENFHVKINSYNLPLLAEARGKGSAEVSSPAK-KTSVLARTEQDDKSDVYDIGIILIEIIVGRPITS 686 (769)
Q Consensus 613 lKp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~-~pe~~~~~~~~~ksDVwS~Gvil~elltG~~p~~ 686 (769)
+.|+||++|.++.+++.=.|+...+ .|+. .++.+ .-.+=+++..+++++..|.
T Consensus 105 L~P~NL~f~~~~~p~i~~RGik~~l-----------~P~~~~ee~f----------L~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 105 LAPDELFFTRDGLPIAKTRGLQNVV-----------DPLPVSEAEF----------LTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp CSGGGEEECTTSCEEESCCEETTTB-----------SCCCCCHHHH----------HHHHHHHHHHHHCTTCCHH
T ss_pred EecceEEEcCCCCEEEEEccCccCC-----------CCCCCCHHHH----------HHHHHHHHHHHHcCCCCHH
Confidence 8999999999999999988753221 1221 12222 1245678888888887664
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=74.68 E-value=6.9 Score=37.46 Aligned_cols=68 Identities=15% Similarity=0.122 Sum_probs=51.0
Q ss_pred EEEEEeccCCCchhhhhcCCCCCCCHHHHHHHHHHHHHHhc-ccccCCCCCccccCccccceeeCCCceeeecCCCCc
Q 004195 558 IYLIFEYAPNETLRSFISGPGYKLTWVQRIAAAIAIVKGVQ-FLHTGIVPGVFSNNLKITDVLLDENFHVKINSYNLP 634 (769)
Q Consensus 558 ~~lV~Ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~~ivHrDlKp~NILld~~~~~kl~DFGla 634 (769)
+.+.|+--+++.=...++ .++...+++++..++.-.. +++.. +|--+.|+||++|.++.+++.=.|+-
T Consensus 63 ~~i~y~~~~~~~~f~~i~----~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL~f~~~~~p~i~hRGi~ 131 (219)
T 4ano_A 63 VKVVIKPPSSFLTFAAIR----KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENLMFNRALEPFFLHVGVK 131 (219)
T ss_dssp EEEEEECCTTCEEHHHHH----TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGEEECTTCCEEESCCEET
T ss_pred EEEEEEcCcccCcHHHHH----hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceEEEeCCCcEEEEEcCCc
Confidence 556566543333333343 4788899999999999888 77754 66778899999999999999988863
No 452
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=73.15 E-value=0.13 Score=35.15 Aligned_cols=26 Identities=23% Similarity=0.229 Sum_probs=10.9
Q ss_pred ceeeeeecceehhhhhhheeeeeeee
Q 004195 393 SYASSVVGGTVGGIAVVGAVLLVVKK 418 (769)
Q Consensus 393 ~~~~~iv~~~~~~~~~~~~~~~~~~~ 418 (769)
++++++++|+++.++++++++++++|
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RR 36 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRR 36 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhh
Confidence 33444444444433333333444444
No 453
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=33.51 E-value=1.7 Score=28.78 Aligned_cols=18 Identities=22% Similarity=0.159 Sum_probs=8.2
Q ss_pred eeeeeecceehhhhhhhe
Q 004195 394 YASSVVGGTVGGIAVVGA 411 (769)
Q Consensus 394 ~~~~iv~~~~~~~~~~~~ 411 (769)
.+++++.+.++++++++.
T Consensus 12 aIAGiVvG~v~gv~li~~ 29 (38)
T 2k1k_A 12 EIVAVIFGLLLGAALLLG 29 (38)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred ceeeeehHHHHHHHHHHH
Confidence 344555555444443333
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=31.34 E-value=98 Score=25.17 Aligned_cols=14 Identities=0% Similarity=0.112 Sum_probs=6.0
Q ss_pred cccCCCcCCEEEcc
Q 004195 155 QISSLRNLQTLILD 168 (769)
Q Consensus 155 ~~~~l~~L~~L~L~ 168 (769)
.|.++++|+.+.|-
T Consensus 15 aF~~c~~L~~i~iP 28 (100)
T 2lz0_A 15 LFAGNTVIREITVQ 28 (100)
T ss_dssp TTTTCTTCCCEEEC
T ss_pred HhcCCCCCcEEEcC
Confidence 34444444444443
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=29.22 E-value=62 Score=26.38 Aligned_cols=48 Identities=15% Similarity=0.187 Sum_probs=35.6
Q ss_pred cCCccCCccCcCCcCCCEEeccCCCCcccCCccccCCCCCCEEEccCcc
Q 004195 171 KFTGAVPSELSLLQVLSVLSLKNNSLSGFLPVSLTGLQSLRVVSLSANH 219 (769)
Q Consensus 171 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~ 219 (769)
.++..-...|.++++|+.+.+..+ ++.+-..+|.++.+|+.+.+....
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 345455667888999999988765 555566788889999988886643
No 456
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=20.36 E-value=4.5e+02 Score=26.63 Aligned_cols=143 Identities=10% Similarity=0.039 Sum_probs=68.5
Q ss_pred CccccCCceeEEEEEeCCCcEEEEEEccccCCCChhHHHHHHHHHhhccCCceeeEeeeee-------------ccCCC-
Q 004195 486 SFMCDASHGQIYKGKLTDGTLVAIRSLKMSKKSSPHMYTYHIELISKLRHSNLVSALGHCL-------------DFSLD- 551 (769)
Q Consensus 486 ~~iG~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~~~~~-------------~~~~~- 551 (769)
+..-.|. +-||.+.. ++..|+||-.. ....+-+..++...-.+.-|+..- +.+.. +...+
T Consensus 75 ~~s~~Gs-tgvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Ri-v~~~~~E~~e~~~~L~~~~~~~~~ 148 (342)
T 1cja_A 75 ERSEKGT-EGLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRV-VSSNSEEGTNMLECLAAIDKSFRV 148 (342)
T ss_dssp EECCSTT-SCEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEE-EESSSHHHHHHHHHHHHHCSSSCH
T ss_pred EeccCCC-CCeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeE-EeeCcHHHHHHHHHHHHhhhhhHH
Confidence 3334454 55665555 57789999442 112233444444444455565332 11110 00000
Q ss_pred --CCCcceEEEEEeccCCCchhhhhcCC-CCCCCHHHHHHHHHHHHHHhcccccCCC-CCccc-cCccccceeeCCCce-
Q 004195 552 --DPSISIIYLIFEYAPNETLRSFISGP-GYKLTWVQRIAAAIAIVKGVQFLHTGIV-PGVFS-NNLKITDVLLDENFH- 625 (769)
Q Consensus 552 --~~~~~~~~lV~Ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~-~~ivH-rDlKp~NILld~~~~- 625 (769)
.......+++|||.+|..|.+.-... ...+...... ..+-+-+++++..+.+ -+.+. .--.++|||++++..
T Consensus 149 l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k--~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~ 226 (342)
T 1cja_A 149 ITTLANQANILLMELVRGITLNKLTTTSAPEVLTKSTMQ--QLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGAT 226 (342)
T ss_dssp HHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHHHHH--HHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTC
T ss_pred HHHhhcccceehhhhcCCCccccchhhhhhhhcCHHHHH--hhchhheehhhhcCCccCcccccCCCChhheEEeCCCCe
Confidence 00012367999999976665432210 0012212111 1112334555544432 22222 235789999977544
Q ss_pred eeecCCCCchh
Q 004195 626 VKINSYNLPLL 636 (769)
Q Consensus 626 ~kl~DFGla~~ 636 (769)
+.++|-+++..
T Consensus 227 ~~~IDhn~af~ 237 (342)
T 1cja_A 227 VVPIDSKIIPL 237 (342)
T ss_dssp EEECSCCCCCC
T ss_pred EEEEcCCcccc
Confidence 88899998754
Done!